BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10573
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum
GN=PCM PE=1 SV=1
Length = 230
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 102/181 (56%), Gaps = 7/181 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
M +DR F PY IGY A IS+PH+HA LELLKD ++PG LD+GSG
Sbjct: 35 METIDRALFVPEGFT-PYTDSPMPIGYNATISAPHMHATCLELLKDYLQPGMHALDVGSG 93
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDK-GNSELLDQGRVQFVAYFWLRHL 119
SGYLTAC A M GPEGR G+EH+ EL +S +N+++ + L+ G + F
Sbjct: 94 SGYLTACFAMMVGPEGRAVGIEHIPELVVASTENVERSAAAALMKDGSLSFHVSDGRLGW 153
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
P+ + V + E LL+QL PGGRMV+PVG Q+L +IDK ADG T
Sbjct: 154 PDAAPYDAIHVGAAA---PEIPRPLLEQLKPGGRMVIPVGT--YSQDLQVIDKSADGSTS 208
Query: 180 V 180
V
Sbjct: 209 V 209
>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio
rerio GN=pcmt PE=2 SV=3
Length = 228
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR +F +R PY + IGY A IS+PH+HA LELL D + GA+ LD+GSG
Sbjct: 32 MLATDRSHF-SRC--NPYMDSPQSIGYQATISAPHMHAYALELLHDHLYEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLL 120
SG L+ C + M GP G+V G++H+ EL E SI N+ K + L+ GR++ +
Sbjct: 89 SGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANVKKDDPSLITSGRIKLIVGDGRMGFT 148
Query: 121 LTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYT 178
P+ + V + T + LLDQL PGGR+++PVG Q L DKL DG T
Sbjct: 149 EEAPYDAIHVGAAAPTVPQA---LLDQLKPGGRLILPVGPAGGNQMLEQYDKLEDGST 203
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos
taurus GN=PCMT1 PE=1 SV=2
Length = 227
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 109/202 (53%), Gaps = 7/202 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---CNPYMDSPQSIGFQATISAPHMHAYALELLFDQLNEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLL 120
SG LTAC A M GP G+V G++H+ EL + SI N+ K + LL GRVQ V
Sbjct: 89 SGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPMLLSSGRVQLVVGDGRMGYA 148
Query: 121 LTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIV 180
P+ + V + + L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 AEAPYDAIHVGAAAPVVPQA---LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVK 204
Query: 181 TTVVRGVRTNPLYRDRFQQKKY 202
+ GV PL Q ++
Sbjct: 205 MKPLMGVIYVPLTDKEKQWSRW 226
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus
scrofa GN=PCMT1 PE=1 SV=3
Length = 227
Score = 130 bits (328), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 109/202 (53%), Gaps = 7/202 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---CNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLL 120
SG LTAC A M GP G+V G++H+ EL + SI N+ K + LL GRVQ V
Sbjct: 89 SGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPMLLSSGRVQLVVGDGRMGYA 148
Query: 121 LTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIV 180
P+ + V + + L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQA---LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVK 204
Query: 181 TTVVRGVRTNPLYRDRFQQKKY 202
+ GV PL Q ++
Sbjct: 205 MKPLMGVIYVPLTDKEKQWSRW 226
>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus
gallus GN=PCMT1 PE=2 SV=3
Length = 228
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 107/192 (55%), Gaps = 7/192 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRCHYAKY---NPYMDSPQSIGFQATISAPHMHAYALELLSDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLL 120
SG LTAC + M GP+G+V G++H+ EL + SI N+ K + LL GRV+ +
Sbjct: 89 SGILTACFSRMVGPKGQVVGIDHIKELVDDSINNVKKDDPTLLSSGRVKLIVGDGRMGYA 148
Query: 121 LTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIV 180
P+ + V + + L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQA---LIDQLKPGGRLILPVGPAGGNQMLEQYDKLEDG-SVK 204
Query: 181 TTVVRGVRTNPL 192
+ GV PL
Sbjct: 205 MKPLMGVIYVPL 216
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana
GN=PCM PE=2 SV=3
Length = 230
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 101/177 (57%), Gaps = 7/177 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
M VDR F T + Y IGY IS+PH+HA L+LL+ +KPG R+LD+GSG
Sbjct: 35 MEAVDRGVFVTDR-SSAYVDSPMSIGYNVTISAPHMHAMCLQLLEKHLKPGMRVLDVGSG 93
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNID-KGNSELLDQGRVQFVAYFWLRHL 119
+GYLTAC A M G EGR GVEH+ EL SS+KNI+ S L +G + +
Sbjct: 94 TGYLTACFAVMVGTEGRAIGVEHIPELVASSVKNIEASAASPFLKEGSLAVHVGDGRQGW 153
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 176
P+ + V + E L+DQL PGGR+V+PVG F Q+L ++DK +DG
Sbjct: 154 AEFAPYDAIHVGAAA---PEIPEALIDQLKPGGRLVIPVGNIF--QDLQVVDKNSDG 205
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 109/202 (53%), Gaps = 7/202 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ + PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---SNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLL 120
SG LTAC A M G G+V G++H+ EL + SI N+ K + LL GRV+ V
Sbjct: 89 SGILTACFARMVGHSGKVIGIDHIKELVDDSITNVKKDDPMLLSSGRVRLVVGDGRMGFA 148
Query: 121 LTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIV 180
P+ + V + + L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQA---LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVK 204
Query: 181 TTVVRGVRTNPLYRDRFQQKKY 202
+ GV PL Q ++
Sbjct: 205 MKPLMGVIYVPLTDKEKQWSRW 226
>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca
fascicularis GN=PCMT1 PE=2 SV=3
Length = 227
Score = 127 bits (318), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAE---CNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLL 120
SG LTAC A M G G+V G++H+ EL + SI N+ K + LL GRVQ V
Sbjct: 89 SGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPTLLSSGRVQLVVGDGRMGYA 148
Query: 121 LTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIV 180
P+ + V + + L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQA---LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVK 204
Query: 181 TTVVRGVRTNPLYRDRFQQKKY 202
+ GV PL Q ++
Sbjct: 205 MKPLMGVIYVPLTDKEKQWSRW 226
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo
sapiens GN=PCMT1 PE=1 SV=4
Length = 227
Score = 127 bits (318), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---CNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLL 120
SG LTAC A M G G+V G++H+ EL + S+ N+ K + LL GRVQ V
Sbjct: 89 SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA 148
Query: 121 LTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIV 180
P+ + V + + L+DQL PGGR+++PVG Q L DKL DG +I
Sbjct: 149 EEAPYDAIHVGAAAPVVPQA---LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SIK 204
Query: 181 TTVVRGVRTNPLYRDRFQQKKY 202
+ GV PL Q ++
Sbjct: 205 MKPLMGVIYVPLTDKEKQWSRW 226
>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo
abelii GN=PCMT1 PE=2 SV=3
Length = 227
Score = 127 bits (318), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---CNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLL 120
SG LTAC A M G G+V G++H+ EL + SI N+ K + LL GRVQ V
Sbjct: 89 SGILTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPTLLSSGRVQLVVGDGRMGYA 148
Query: 121 LTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIV 180
P+ + V + + L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQA---LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVK 204
Query: 181 TTVVRGVRTNPLYRDRFQQKKY 202
+ GV PL Q ++
Sbjct: 205 MKPLMGVIYVPLTDKEKQWSRW 226
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus
musculus GN=Pcmt1 PE=1 SV=3
Length = 227
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 109/202 (53%), Gaps = 7/202 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
ML DR ++ + PY + IG+ A IS+PH+HA LELL D++ GA+ LD+GSG
Sbjct: 32 MLATDRSHYAK---SNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLL 120
SG LTAC A M G G+V G++H+ EL + SI N+ K + LL GRV+ V
Sbjct: 89 SGILTACFARMVGNSGKVIGIDHIKELVDDSITNVKKDDPMLLSSGRVRLVVGDGRMGYA 148
Query: 121 LTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIV 180
P+ + V + + L+DQL PGGR+++PVG Q L DKL DG ++
Sbjct: 149 EEAPYDAIHVGAAAPVVPQA---LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDG-SVK 204
Query: 181 TTVVRGVRTNPLYRDRFQQKKY 202
+ GV PL Q ++
Sbjct: 205 MKPLMGVIYVPLTDKEKQWSRW 226
>sp|Q9GPS6|PIMT_DICDI Probable protein-L-isoaspartate O-methyltransferase
OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1
Length = 316
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 114/194 (58%), Gaps = 20/194 (10%)
Query: 4 VDRKNFF-TRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARI-LDIGSGS 61
VDRK F + V PY + + IGY A IS+PH+HA ML+LL D+I + LDIGSGS
Sbjct: 77 VDRKLFLENKNVENPYYDEPKPIGYNATISAPHMHALMLDLLADRIPMSNGVALDIGSGS 136
Query: 62 GYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVA------YFW 115
GY+TACL ++ G GRV GVEH+ EL E SI++I + +S LLD R+QF+ +
Sbjct: 137 GYVTACLGHLMGCTGRVIGVEHIPELIERSIESIKRLDSTLLD--RIQFLVGDGIKGWKQ 194
Query: 116 LRHLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLAD 175
L++ ++ I+S E L+DQL GGR+VMPVG+ L ++DK D
Sbjct: 195 LKYDIIY----LGAAIESLQVARE----LIDQLKNGGRIVMPVGKSNDFHELMVVDKNED 246
Query: 176 GYTIVTT--VVRGV 187
G + + VVR V
Sbjct: 247 GIVSIKSLGVVRFV 260
>sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis
elegans GN=pcm-1 PE=2 SV=1
Length = 225
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 96/173 (55%), Gaps = 6/173 (3%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
M VDR +F R PY ++IGY A +S+PH+HA L+ L++ + GA+ LD+GSG
Sbjct: 32 MKSVDRGDFAPRA---PYEDAPQRIGYNATVSAPHMHAAALDYLQNHLVAGAKALDVGSG 88
Query: 61 SGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLL 120
SGYLT C+A M G G V G+EH+ +L E S KNI K +SE L++G V + +
Sbjct: 89 SGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRKHHSEQLERGNVIIIEGDGRQGFA 148
Query: 121 LTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKL 173
P+ + V + L DQL GGRM++PV + Q IDK+
Sbjct: 149 EKAPYNAIHV---GAASKGVPKALTDQLAEGGRMMIPVEQVDGNQVFMQIDKI 198
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2
Length = 226
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 12/197 (6%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSG 60
M DRK++ R PY + IG G IS+PH+HA LE L+D +KPGARILD+GSG
Sbjct: 32 MKETDRKHYSPR---NPYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSG 88
Query: 61 SGYLTACL-----AYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFW 115
SGYLTAC A + R+ G+EH EL S N++ + +LD G++ V
Sbjct: 89 SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG 148
Query: 116 LRHLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLAD 175
+ P+ + V + + + L++QL GGR+++PVG Q + DK A+
Sbjct: 149 RKGYPPNAPYNAIHVGAAA---PDTPTELINQLASGGRLIVPVGPDGGSQYMQQYDKDAN 205
Query: 176 GYTIVTTVVRGVRTNPL 192
G +T ++ GV PL
Sbjct: 206 GKVEMTRLM-GVMYVPL 221
>sp|Q9URZ1|PIMT_SCHPO Probable protein-L-isoaspartate O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pcm2 PE=3 SV=1
Length = 230
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 17 PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEG 76
PY + IGYG IS+PH+HA L+ L+ ++PG LDIGSGSGYL A +A M P G
Sbjct: 45 PYMDSPQSIGYGVTISAPHMHATALQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNG 104
Query: 77 RVYGVEHVMELAESSIKNI------DKGNSELLDQGRVQFVAYFWLRHLLLTNPHGSTRV 130
V G+EH+ +L E+S KN+ D+ E+ + R+Q + T+
Sbjct: 105 TVKGIEHIPQLVETSKKNLLKDINHDEVLMEMYKEKRLQINVG---DGRMGTSEDEKFDA 161
Query: 131 IQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 176
I + E L+DQL G++++P+G QN+ +I+K G
Sbjct: 162 IHVGASASELPQKLVDQLKSPGKILIPIGT--YSQNIYLIEKNEQG 205
>sp|Q9YDA1|PIMT_AERPE Protein-L-isoaspartate O-methyltransferase OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=pcm PE=3 SV=2
Length = 260
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 10/159 (6%)
Query: 18 YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGR 77
Y + IG+G IS+P + +ML+LL + PG ++LD+G+GSGY +A LA + P GR
Sbjct: 78 YEDRPLPIGHGQTISAPGVVGRMLQLLDPQ--PGEKVLDVGAGSGYQSALLAELVTPGGR 135
Query: 78 VYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLLLTNPHGSTRVIQSCWTK 137
VY VE + ELAE + +N++K + + V + +H P+ +V +
Sbjct: 136 VYAVERIPELAEYARENLEKTGYRGVVEVVVGDGSKGLPQH----APYHRIKVAAAA--- 188
Query: 138 EEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 176
+ L++QL PGGRMV+P+G P Q LTII+K DG
Sbjct: 189 PKPPKPLVEQLAPGGRMVIPIGTP-DLQILTIIEKTPDG 226
>sp|Q8TYL4|PIMT_METKA Protein-L-isoaspartate O-methyltransferase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pcm
PE=3 SV=1
Length = 226
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 89/177 (50%), Gaps = 11/177 (6%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSR-QIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
ML+V R F + + + S IG G IS+PH+ A M ELL + PG ++L++G+
Sbjct: 34 MLKVPRHEFVPEDLRDRAYVDSPLPIGRGQTISAPHMVAIMTELLDPR--PGHKVLEVGA 91
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHL 119
GSGY A +A + P+GRV VE + ELA+ + N+ K G +FV
Sbjct: 92 GSGYHAAVVAELVKPDGRVITVERIPELADFARNNLKK-------TGYDRFVKVLVGDGT 144
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 176
P I + LL+QL PGG+MV+PVG+ Q L +++K DG
Sbjct: 145 KGYPPEAPYDRILVTAGAPDVPESLLEQLKPGGKMVIPVGDRHM-QELWLVEKTEDG 200
>sp|A0B9U1|PIMT_METTP Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1
Length = 210
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 1 MLRVDRKNFFTRVVNE-PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M RV R+ F + Y + IG+G IS+PH+ A M +LL ++ G ++L++G
Sbjct: 22 MSRVPRELFVPEELRPMAYEDRPLPIGHGQTISAPHMVAMMCDLLD--LREGMKVLEVGG 79
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHL 119
G GY A +A + GP G VY VE + EL E + +N L++ R + V+
Sbjct: 80 GCGYHAAVMAELVGPSGHVYSVERIPELVEMARRN--------LERARYRNVSMILGDGT 131
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLAD 175
L + I + + L +QL PGGRMV+PVG Q+L ++ K D
Sbjct: 132 LGYSEQAPYDRISVAASAPDIPEPLKEQLRPGGRMVIPVGS--YSQDLLVVTKNHD 185
>sp|A2BKH8|PIMT_HYPBU Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1
Length = 241
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 18/184 (9%)
Query: 1 MLRVDRKNFFTRVVNE-PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
MLRV R+ F + Y IG+G IS+PH+ A M E +KPG ++L++G+
Sbjct: 37 MLRVPRELFVPDELRHLAYEDTPLPIGHGQTISAPHMVAMMTEYAD--LKPGMKVLEVGA 94
Query: 60 GSGYLTACLAYMAGPE-------GRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVA 112
GSGY A +A + P G VY +E + ELAE + +N+++ RV +
Sbjct: 95 GSGYHAAVMAEVVAPSDEPREHWGHVYTIERIPELAEFARRNLERAGY----ADRVTVIV 150
Query: 113 YFWLRHLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDK 172
R P+ R+I + + L+DQL PGG+MV+P+G+ + Q+L ++ K
Sbjct: 151 GDGSRGYPEKAPY--DRIIVTA-AAPDIPGPLIDQLKPGGKMVIPIGDRYL-QHLYVVVK 206
Query: 173 LADG 176
DG
Sbjct: 207 TRDG 210
>sp|Q8TT93|PIMT1_METAC Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm1 PE=3 SV=1
Length = 251
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 21/181 (11%)
Query: 1 MLRVDRKNFFTRVVNEPYRIKSR-QIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
MLRV R F + I + +IG+G IS+PH+ A M +LL+ + G ++L+IG+
Sbjct: 66 MLRVPRHLFVPEYAKKGAYIDTPLEIGFGQTISAPHMVAIMCDLLE--LSEGLKVLEIGA 123
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSE----LLDQGRVQFVAYFW 115
GSGY A + + G G VY VE + L + + +N+ K E LLD G + +
Sbjct: 124 GSGYNAAVMGELVGKSGHVYTVERIEPLVDFARENLKKAGYENVTVLLDDGSMGYSK--- 180
Query: 116 LRHLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLAD 175
P+ R++ +C + LL+QL PGG M++PVG+ Q L I K +
Sbjct: 181 ------CAPY--DRIVVTCAAP-DIPEPLLEQLKPGGIMIIPVGDYI--QELVRIKKDPE 229
Query: 176 G 176
G
Sbjct: 230 G 230
>sp|Q8PW90|PIMT_METMA Protein-L-isoaspartate O-methyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pcm PE=3 SV=1
Length = 243
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 1 MLRVDRKNFFTRVVNEP-YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
MLRV R F Y +IG+G IS+PH+ A M E+L+ + G ++L+IG+
Sbjct: 55 MLRVPRHRFVPEYEQRAAYVDMPLEIGHGQTISAPHMVAMMCEILE--LAEGHKVLEIGA 112
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNID----KGNSELLDQGRVQFVAYFW 115
GSGY A ++ + G G +Y VE V LA + KN+ K + LL+ G + + Y
Sbjct: 113 GSGYNAAVMSELVGKTGHIYTVERVEPLANFAKKNLKEAGYKNVTVLLENGSMGYPGY-- 170
Query: 116 LRHLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVG 159
P+ R+ +C LL+QL PGG MV+PVG
Sbjct: 171 -------APY--DRIAVTCAAP-NIPETLLEQLKPGGIMVIPVG 204
>sp|Q8TT94|PIMT2_METAC Protein-L-isoaspartate O-methyltransferase 2 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm2 PE=3 SV=1
Length = 238
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 21/181 (11%)
Query: 1 MLRVDRKNFFTRVVNEP-YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M RV R F Y + +IG+G IS+PH A M E+L+ + G ++L+IG+
Sbjct: 50 MFRVPRHRFVPEYEQRAAYTDRPLEIGHGQTISTPHTVALMCEILE--LSEGHKVLEIGT 107
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSE----LLDQGRVQFVAYFW 115
GSGY A +A + G G +Y VE + L + KN+++ + LL+ G + + Y
Sbjct: 108 GSGYNAAVMAELVGKTGHIYSVERIEPLVNFARKNLEQMGYDNVTVLLENGSMGYPRY-- 165
Query: 116 LRHLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLAD 175
P+ R+ +C LL+QL PGG MV+PVG+ Q L + K ++
Sbjct: 166 -------APY--DRIAVTCAAP-TIPKALLEQLKPGGIMVIPVGD--YSQELIRVKKDSN 213
Query: 176 G 176
G
Sbjct: 214 G 214
>sp|Q7NJY2|PIMT_GLOVI Protein-L-isoaspartate O-methyltransferase OS=Gloeobacter violaceus
(strain PCC 7421) GN=pcm PE=3 SV=2
Length = 205
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 1 MLRVDRKNF----FTRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILD 56
M +V R F +TR+ Y + IG+ IS P I A M E +I PGA++L+
Sbjct: 20 MAKVPRHRFVPPPYTRLA---YEDRPLPIGHSQTISQPFIVAYMSE--AARITPGAKVLE 74
Query: 57 IGSGSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYF-- 114
IG+GSGY A LA M VY VE V ELA+ + + +++ + RV+ +
Sbjct: 75 IGTGSGYQAAVLAEMGA---EVYTVEIVPELAKRAERTLEELGYRSV---RVRSGDGYQG 128
Query: 115 WLRHLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLA 174
W +H I E L+DQL GR+++PVG + Q +T++ +
Sbjct: 129 WPQHAPFD-------AIVVTAAPERIPQPLIDQLAVNGRLIVPVGTQTEDQRMTVLTRTP 181
Query: 175 DGYTIVTTVVRGVRTNPLYRDRFQQ 199
G IV VR PL R++ Q+
Sbjct: 182 GG--IVEQKTFPVRFVPLTREKPQE 204
>sp|A8AAV7|PIMT_IGNH4 Protein-L-isoaspartate O-methyltransferase OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=pcm PE=3 SV=1
Length = 211
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 93/184 (50%), Gaps = 19/184 (10%)
Query: 1 MLRVDRKNFFTRVVNE-PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M++V R+ F + Y IG G IS+PH+ A M+E +++ G ++L++G+
Sbjct: 27 MMKVPRELFVPEELRHMAYEDTPLPIGAGQTISAPHMVAYMVE--AAELRRGDKVLEVGT 84
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESS---IKNIDKGN-SELLDQGRVQFVAYFW 115
GSGY A +A + GPEG VY +E + ELAE + +K + N + L+ G +
Sbjct: 85 GSGYHAAVMAELVGPEGHVYTIERIPELAERARERLKALGYNNVTVLVGDGSKGYPPAAP 144
Query: 116 LRHLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLAD 175
+++T + RV ++ LL QL GG MV+PV E Q L I K +
Sbjct: 145 YDKIIVTA--AAKRVPEA----------LLKQLKVGGIMVIPVEEEPGYQVLYKIIKTPE 192
Query: 176 GYTI 179
GY I
Sbjct: 193 GYVI 196
>sp|A7HL14|PIMT_FERNB Protein-L-isoaspartate O-methyltransferase OS=Fervidobacterium
nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pcm
PE=3 SV=1
Length = 199
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 14/193 (7%)
Query: 1 MLRVDRKNFFTRVVNE-PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M +VDRK F + E Y IGYG IS+PH+ M E L+ +K G R+L+IG+
Sbjct: 19 MNKVDRKLFVPSELQESAYLDIPLPIGYGQTISAPHMVGMMCEYLE--LKDGDRVLEIGT 76
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHL 119
GSGY A ++ + G G +Y +E + EL + + K I+ LL + + L
Sbjct: 77 GSGYNAAVMSLLVGESGWIYTIERIPELVQEAQKRIN-----LLGINNITIIVGDGKEGL 131
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
P V +C+ K L++QL G MV+PVG + Q L +I K G I
Sbjct: 132 EEYAPFDKITV--TCYAK-HIPKKLIEQLKDNGIMVIPVGNEYV-QILKLIRK--SGEKI 185
Query: 180 VTTVVRGVRTNPL 192
+ + VR P+
Sbjct: 186 IEEDLTHVRFVPM 198
>sp|A2SF76|PIMT_METPP Protein-L-isoaspartate O-methyltransferase OS=Methylibium
petroleiphilum (strain PM1) GN=pcm PE=3 SV=1
Length = 269
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 97/200 (48%), Gaps = 24/200 (12%)
Query: 1 MLRVDRKNFF-TRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGA--RILDI 57
M V R +F T + N+ Y S IG G IS P + A+M+EL+ GA R+L+I
Sbjct: 81 MRAVPRHSFVDTALANQAYEDTSLPIGLGQTISKPSVVARMIELMLALQPAGARPRLLEI 140
Query: 58 GSGSGYLTACLAYMAGPEGRVYGVEHVMEL---AESSIKNIDKGNSELL-DQGRVQFVAY 113
GSG GY A LA +A +V +E + L A ++ ++ GN L+ GR+
Sbjct: 141 GSGCGYQAAVLAQLA---RQVVSIERLRPLYDKARENLAPLNFGNLRLVYGDGRIGHA-- 195
Query: 114 FWLRHLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFK-GQNLTIIDK 172
P+ I + E+ +DQL PGGR+V P+ + GQ L +ID+
Sbjct: 196 ----------PNAPYDGIIAAAGGEDIPQPWIDQLGPGGRLVAPMLDARSGGQVLVVIDR 245
Query: 173 LADGYTIVTTVVRGVRTNPL 192
ADG +V ++ VR PL
Sbjct: 246 HADG-NLVRSLHEAVRFVPL 264
>sp|O27962|PIMT2_ARCFU Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm2 PE=3 SV=1
Length = 219
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 15 NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGP 74
NE Y IGYG IS+PH+ A M ELL ++ G ++L++G+G GY A A + G
Sbjct: 43 NEAYVDTPLPIGYGQTISAPHMVAIMCELLD--LREGDKVLEVGTGCGYHAAVTAEIVGK 100
Query: 75 EGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLLLTNPHGSTRVIQSC 134
G+V +E++ ELAE + + + L V+ + + P+ V +
Sbjct: 101 SGKVISIEYIPELAERA-----RAILKALGYDNVEVIVGDGSKGYEKEAPYDKIYVTAAA 155
Query: 135 WTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 176
+ L++QL P GRMV+PVG+ Q L I++K G
Sbjct: 156 ---PDIPKPLIEQLKPRGRMVIPVGDSV--QWLIIVEKDESG 192
>sp|O30199|PIMT1_ARCFU Protein-L-isoaspartate O-methyltransferase 1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm1 PE=3 SV=1
Length = 216
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
Query: 25 IGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGRVYGVEHV 84
IGYG IS+PH+ A M ELL ++ G R+L+IG+G GY A A + G G V VE +
Sbjct: 53 IGYGQTISAPHMVAIMCELLD--LREGERVLEIGTGCGYHAAVTAEIVGKRGLVVSVERI 110
Query: 85 MELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLLLTNPHGSTRVIQSCWTKEEYNSWL 144
ELAE + +N+ S L + V V L + P I + + L
Sbjct: 111 PELAEIAKRNL----SALGYENVVVIVGDGSLGY----EPMAPYDKIYVTASAPDIPKPL 162
Query: 145 LDQLVPGGRMVMPVGE 160
L+QL GG+MV+P+GE
Sbjct: 163 LEQLKIGGKMVIPIGE 178
>sp|Q12UV0|PIMT_METBU Protein-L-isoaspartate O-methyltransferase OS=Methanococcoides
burtonii (strain DSM 6242) GN=pcm PE=3 SV=1
Length = 203
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 25 IGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGRVYGVEHV 84
IGY IS+PH+ A M +LLK I G IL+IGSGSGY A +A +AG G+VY VE +
Sbjct: 43 IGYDQTISAPHMVAIMCDLLK--ITEGMTILEIGSGSGYNAAVMAELAGENGKVYTVERI 100
Query: 85 MELAESSIKNIDKGN----SELLDQGRVQFVAYFWLRHLLLTNPHGSTRVIQSCWTKEEY 140
EL + + N+++ + + D G + + +T+ E
Sbjct: 101 PELVDLARNNLERAGYSNVTVVHDDGSCGLPEHAPYDRIAVTS------------VAPEV 148
Query: 141 NSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 176
L +QL G MV+PVG + Q L ++ K + G
Sbjct: 149 PPPLREQLSKNGIMVIPVGTQY--QTLVVVKKDSKG 182
>sp|A7MTT6|PIMT_VIBHB Protein-L-isoaspartate O-methyltransferase OS=Vibrio harveyi
(strain ATCC BAA-1116 / BB120) GN=pcm PE=3 SV=1
Length = 208
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 26/195 (13%)
Query: 3 RVDRKNFFTR-VVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGS 61
R+ R++F ++ ++++ Y + IG G IS P+I A+M ELL +K + +L+IG+GS
Sbjct: 29 RLPRESFVSQAMMHQAYDNNALPIGQGQTISQPYIVAKMTELLD--LKSDSNVLEIGTGS 86
Query: 62 GYLTACLAYMAGPEGRVYGVEHVMEL---AESSIKNIDKGN-SELLDQGRVQFVAYFWLR 117
GY TA LA + VY VE + L A+ +K +D N S G WL
Sbjct: 87 GYQTAVLAQIVD---HVYSVERIKSLQWDAKRRLKQLDIYNVSTKHGDG--------WLG 135
Query: 118 HLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGY 177
G I E LL QL GG+M++PVGE + Q L I++ + Y
Sbjct: 136 W----EAKGPFDAIIVTAAAESVPQALLSQLKEGGKMIIPVGE--EEQQLLKIERQGEQY 189
Query: 178 TIVTTVVRGVRTNPL 192
++TVV VR PL
Sbjct: 190 --LSTVVEMVRFVPL 202
>sp|Q7MHQ8|PIMT_VIBVY Protein-L-isoaspartate O-methyltransferase OS=Vibrio vulnificus
(strain YJ016) GN=pcm PE=3 SV=1
Length = 208
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 95/195 (48%), Gaps = 26/195 (13%)
Query: 3 RVDRKNFFTR-VVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGS 61
RV R+ F ++ ++++ Y + IG G IS P+I A+M ELL+ +K +++L+IG+GS
Sbjct: 29 RVPRECFLSQAMMHQAYDNNALPIGQGQTISQPYIVAKMTELLR--LKRDSKVLEIGTGS 86
Query: 62 GYLTACLAYMAGPEGRVYGVEHVMEL---AESSIKNIDKGN-SELLDQGRVQFVAYFWLR 117
GY TA LA + VY VE + L A+ +K +D N S G WL
Sbjct: 87 GYQTAVLALLVE---HVYSVERIKSLQWDAKRRLKQLDIYNVSTKHGDG--------WLG 135
Query: 118 HLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGY 177
G I E LL QL GGRMV+PVG Q L +I++ D +
Sbjct: 136 W----ENKGPFDAIIVTAAAESVPPVLLQQLNDGGRMVLPVGT--DEQQLILIERQKDQF 189
Query: 178 TIVTTVVRGVRTNPL 192
V+ V+ V PL
Sbjct: 190 --VSQVIEAVNFVPL 202
>sp|Q8DC56|PIMT_VIBVU Protein-L-isoaspartate O-methyltransferase OS=Vibrio vulnificus
(strain CMCP6) GN=pcm PE=3 SV=1
Length = 208
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 95/195 (48%), Gaps = 26/195 (13%)
Query: 3 RVDRKNFFTR-VVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGS 61
RV R+ F ++ ++++ Y + IG G IS P+I A+M ELL+ +K +++L+IG+GS
Sbjct: 29 RVPRECFLSQAMMHQAYDNNALPIGQGQTISQPYIVAKMTELLR--LKRDSKVLEIGTGS 86
Query: 62 GYLTACLAYMAGPEGRVYGVEHVMEL---AESSIKNIDKGN-SELLDQGRVQFVAYFWLR 117
GY TA LA + VY VE + L A+ +K +D N S G WL
Sbjct: 87 GYQTAVLALLVE---HVYSVERIKSLQWDAKRRLKQLDIYNVSTKHGDG--------WLG 135
Query: 118 HLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGY 177
G I E LL QL GGRMV+PVG Q L +I++ D +
Sbjct: 136 W----ENKGPFDAIIVTAAAESVPPVLLQQLNDGGRMVLPVGT--DEQQLILIERQKDQF 189
Query: 178 TIVTTVVRGVRTNPL 192
V+ V+ V PL
Sbjct: 190 --VSQVIEAVNFVPL 202
>sp|B8J9E3|PIMT_ANAD2 Protein-L-isoaspartate O-methyltransferase OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pcm PE=3
SV=1
Length = 209
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 23/179 (12%)
Query: 4 VDRKNFFTRVVN-EPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSG 62
+DR F +R ++ E Y + IG+G IS P++ A M E L+ ++ G R+L++G+GSG
Sbjct: 26 LDRARFVSRDLSAEAYADRPLPIGFGQTISQPYVVAFMTEALE--LEGGERVLEVGTGSG 83
Query: 63 YLTACLAYMAGPEGRVYGVEHV----MELAESSIKNIDKGNSELLD-QGRVQFVAYFWLR 117
Y TA LA +A G V+ VE V ++ + N L + G + +
Sbjct: 84 YQTALLARLA---GEVWSVEIVPGLAARARALLLEELGLANVHLREGDGALGWPEAAPFE 140
Query: 118 HLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 176
+L+T + RV + L QL PGGRMV+PVGE Q L ++++ ADG
Sbjct: 141 RILVTA--AAPRVPPA----------LRAQLAPGGRMVLPVGEAESEQVLRVVERGADG 187
>sp|A3MY16|PIMT_PYRCJ Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=pcm PE=3 SV=1
Length = 207
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 14/163 (8%)
Query: 1 MLRVDRKNFFT---RVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDI 57
ML+V R+ F T R++ Y + + GA IS+PH+ A M EL++ + PG +IL++
Sbjct: 24 MLKVPREEFVTPEYRMMA--YEDRPLPLFAGATISAPHMVAMMCELIEPR--PGMKILEV 79
Query: 58 GSGSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLR 117
G+GSGY A A +G+VY VE V ELA + +N+++ L G V+ R
Sbjct: 80 GTGSGYHAAVCAEAIERQGKVYTVEIVRELAIFAAQNLER----LGYLGVVEVYRGDGRR 135
Query: 118 HLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGE 160
L P + V + E L++QL GG MV+PV E
Sbjct: 136 GLERHAPFDAVLVTAAA---SEIPKALVEQLREGGVMVIPVEE 175
>sp|Q57636|PIMT_METJA Protein-L-isoaspartate O-methyltransferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pcm PE=1 SV=1
Length = 215
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 1 MLRVDRKNFFTRVVNE-PYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
+L+V R+ F + E Y +IGYG IS+ H+ M ELL +KPG ++L+IG+
Sbjct: 29 LLKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMKVLEIGT 86
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHL 119
G GY A A + G +G V +E + ELAE + + + K L + V L +
Sbjct: 87 GCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK----LGYDNVIVIVGDGTLGY- 141
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
P I + + L+ QL GG+++MPVG Q L + +K D I
Sbjct: 142 ---EPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGRYL--QRLVLAEKRGDEIII 196
>sp|Q123X2|PIMT2_POLSJ Protein-L-isoaspartate O-methyltransferase 2 OS=Polaromonas sp.
(strain JS666 / ATCC BAA-500) GN=pcm2 PE=3 SV=1
Length = 211
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 1 MLRVDRKNFF-TRVVNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M +V R F + Y+ + IG+G IS P+I A M +L +++PG ++L++G+
Sbjct: 29 MGKVPRHEFVPADQLPRAYQNRPLPIGHGQTISQPYIVALMTDL--ARVEPGHKVLEVGT 86
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHL 119
GSGY A +A++A VY +E + L + + + K + + Q R+ + W H
Sbjct: 87 GSGYQAAVMAHLAR---AVYTIEIIEPLGLQARQRLQKLGYDNV-QVRLGDGYHGWEEH- 141
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
P+ + V + L+ QL GGRMV+PVG F Q L +++K DG T+
Sbjct: 142 ---APYDAILVTAAA---SHIPPPLIRQLKAGGRMVIPVGAAFMVQQLMLVEKNRDG-TV 194
Query: 180 VTTVVRGVRTNPLYRDR 196
T + V PL R
Sbjct: 195 STRQILPVAFVPLTGQR 211
>sp|Q88MF0|PIMT_PSEPK Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain KT2440) GN=pcm PE=3 SV=2
Length = 212
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 18 YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGR 77
Y + IG+ IS P + A M ELL + P ++L+IG+GSGY TA LA + R
Sbjct: 46 YEDTALPIGHNQTISQPFMVAHMSELLLEA-GPLDKVLEIGTGSGYQTAILAQLVE---R 101
Query: 78 VYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLLLTNPHGSTRVIQSCWTK 137
V+ VE IK + E L + ++ V + W I
Sbjct: 102 VFSVER--------IKVLQDRAKERLVELNLRNVVFRWGDGCEGWPALAPYNGIIVTAVA 153
Query: 138 EEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVVRGVRTNPL 192
E LLDQL PGGRMV+PVG + Q L +I + G++ V+ VR PL
Sbjct: 154 PEVPQALLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHGFS--RRVLGAVRFVPL 206
>sp|B0KSC8|PIMT_PSEPG Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain GB-1) GN=pcm PE=3 SV=2
Length = 212
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 18 YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGR 77
Y + IG+ IS P + A M ELL + P ++L+IG+GSGY TA LA + R
Sbjct: 46 YEDTALPIGHNQTISQPFMVAHMSELLLEA-GPLDKVLEIGTGSGYQTAILAQLVE---R 101
Query: 78 VYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLLLTNPHGSTRVIQSCWTK 137
V+ VE IK + E L + ++ V + W I
Sbjct: 102 VFSVER--------IKVLQDRAKERLVELNLRNVVFRWGDGCEGWPALAPYNGIIVTAVA 153
Query: 138 EEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVVRGVRTNPL 192
E LLDQL PGGRMV+PVG + Q L +I + G++ V+ VR PL
Sbjct: 154 PEVPQALLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHGFS--RRVLGAVRFVPL 206
>sp|A5W820|PIMT_PSEP1 Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=pcm PE=3 SV=2
Length = 212
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 18 YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGR 77
Y + IG+ IS P + A M ELL + P ++L+IG+GSGY TA LA + R
Sbjct: 46 YEDTALPIGHNQTISQPFMVAHMSELLLEA-GPLDKVLEIGTGSGYQTAILAQLVE---R 101
Query: 78 VYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRHLLLTNPHGSTRVIQSCWTK 137
V+ VE IK + E L + ++ V + W I
Sbjct: 102 VFSVER--------IKVLQDRAKERLVELNLRNVVFRWGDGCEGWPALAPYNGIIVTAVA 153
Query: 138 EEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVVRGVRTNPL 192
E LLDQL PGGRMV+PVG + Q L +I + G++ V+ VR PL
Sbjct: 154 PEVPQALLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHGFS--RRVLGAVRFVPL 206
>sp|O59534|PIMT_PYRHO Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pcm PE=3 SV=2
Length = 220
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 25/167 (14%)
Query: 14 VNEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAG 73
V+EP I + G IS+PH+ A MLE+ +KPG +L++G+GSG+ A +A +
Sbjct: 52 VDEPLPIPA-----GQTISAPHMVAIMLEIAD--LKPGMNVLEVGTGSGWNAALIAEIV- 103
Query: 74 PEGRVYGVEHVMELAESSIKNIDKGNSE----LLDQGRVQFVAYFWLRHLLLTNPHGSTR 129
+G VY +E + EL E + +N+++ + +L G F P
Sbjct: 104 -KGDVYSIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF------------PPKSPYD 150
Query: 130 VIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADG 176
I E L++QL PGG++++PVG Q L + K DG
Sbjct: 151 AIIVTAGAPEIPKPLVEQLKPGGKLIIPVGSYHLWQELLEVIKREDG 197
>sp|Q1I655|PIMT_PSEE4 Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas
entomophila (strain L48) GN=pcm PE=3 SV=2
Length = 212
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 20/178 (11%)
Query: 18 YRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSGYLTACLAYMAGPEGR 77
Y + IG+ IS P + A M ELL + P ++L+IG+GSGY TA LA + R
Sbjct: 46 YEDTALPIGHNQTISQPFMVAHMSELLLEA-GPLDKVLEIGTGSGYQTAILAQLVE---R 101
Query: 78 VYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFW---LRHLLLTNPHGSTRVIQSC 134
V+ VE IK + E L + ++ V + W P+ V
Sbjct: 102 VFSVER--------IKVLQDRAKERLVELNLRNVVFRWGDGCEGWPALAPYNGIIV---T 150
Query: 135 WTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTIVTTVVRGVRTNPL 192
E LLDQL PGGRMV+PVG + Q L +I + G++ V+ VR PL
Sbjct: 151 AVAPEVPQALLDQLAPGGRMVIPVGPAGETQQLMLIVREEQGFS--RRVLGAVRFVPL 206
>sp|Q0W2W0|PIMT_UNCMA Protein-L-isoaspartate O-methyltransferase OS=Uncultured
methanogenic archaeon RC-I GN=pcm PE=3 SV=1
Length = 188
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 91/200 (45%), Gaps = 29/200 (14%)
Query: 1 MLRVDRKNFFTRVVN-EPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGS 59
M RV R+ F V + Y IG+ IS+P + A M + L I+ G ++L+IG+
Sbjct: 1 MDRVPREEFVPEDVRPDAYYDTPLPIGHNQTISAPSMVAIMCQALD--IREGNKVLEIGT 58
Query: 60 GSGYLTACLAYMAGPEGRVYGVEHVMELAE---SSIKNIDKGNSELL----DQGRVQFVA 112
G GY A +A +AG G VY VE + ELA+ S + + N ++ +G F
Sbjct: 59 GLGYHAAVMAVLAGASGVVYTVERIPELADMARSVLSRLGFDNVKVFLRDGTEGLPDFAP 118
Query: 113 YFWLRHLLLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDK 172
Y I + L+DQL GR+V+PVG F Q L +++K
Sbjct: 119 YDR---------------ISVAAAAPDVPQPLVDQLKDPGRLVIPVGRYF--QQLMLVEK 161
Query: 173 LADGYTIVTTVVRGVRTNPL 192
G I+TT GV PL
Sbjct: 162 --KGGQIITTDKGGVAFVPL 179
>sp|B1JJF4|PIMT_YERPY Protein-L-isoaspartate O-methyltransferase OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=pcm
PE=3 SV=1
Length = 208
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 4 VDRKNFFTRVV-NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSG 62
V R+ F + ++ Y + IG G IS P++ A+M ELL+ + P +R+L+IG+GSG
Sbjct: 30 VPRERFVDEALAHKAYENTALPIGAGQTISQPYMVARMTELLQ--LTPTSRVLEIGTGSG 87
Query: 63 YLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRH---L 119
Y TA LA++ V ++ + A+ +K +D N RH
Sbjct: 88 YQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDLHNVST--------------RHGDGW 133
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
L G I E LL+QL GG +V+PVGE F Q L + + + Y I
Sbjct: 134 LGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQF--QTLKYVQRRNNEYHI 191
Query: 180 VTTVVRGVRTNPLYR 194
T V VR PL +
Sbjct: 192 ET--VEAVRFVPLVK 204
>sp|Q66EB9|PIMT_YERPS Protein-L-isoaspartate O-methyltransferase OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=pcm
PE=3 SV=1
Length = 208
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 4 VDRKNFFTRVV-NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSG 62
V R+ F + ++ Y + IG G IS P++ A+M ELL+ + P +R+L+IG+GSG
Sbjct: 30 VPRERFVDEALAHKAYENTALPIGAGQTISQPYMVARMTELLQ--LTPTSRVLEIGTGSG 87
Query: 63 YLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRH---L 119
Y TA LA++ V ++ + A+ +K +D N RH
Sbjct: 88 YQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDLHNVST--------------RHGDGW 133
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
L G I E LL+QL GG +V+PVGE F Q L + + + Y I
Sbjct: 134 LGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQF--QTLKYVQRRNNEYHI 191
Query: 180 VTTVVRGVRTNPLYR 194
T V VR PL +
Sbjct: 192 ET--VEAVRFVPLVK 204
>sp|A4TQ01|PIMT_YERPP Protein-L-isoaspartate O-methyltransferase OS=Yersinia pestis
(strain Pestoides F) GN=pcm PE=3 SV=1
Length = 208
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 4 VDRKNFFTRVV-NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSG 62
V R+ F + ++ Y + IG G IS P++ A+M ELL+ + P +R+L+IG+GSG
Sbjct: 30 VPRERFVDEALAHKAYENTALPIGAGQTISQPYMVARMTELLQ--LTPTSRVLEIGTGSG 87
Query: 63 YLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRH---L 119
Y TA LA++ V ++ + A+ +K +D N RH
Sbjct: 88 YQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDLHNVST--------------RHGDGW 133
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
L G I E LL+QL GG +V+PVGE F Q L + + + Y I
Sbjct: 134 LGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQF--QTLKYVQRRNNEYHI 191
Query: 180 VTTVVRGVRTNPLYR 194
T V VR PL +
Sbjct: 192 ET--VEAVRFVPLVK 204
>sp|Q1CLR2|PIMT_YERPN Protein-L-isoaspartate O-methyltransferase OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=pcm PE=3 SV=1
Length = 208
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 4 VDRKNFFTRVV-NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSG 62
V R+ F + ++ Y + IG G IS P++ A+M ELL+ + P +R+L+IG+GSG
Sbjct: 30 VPRERFVDEALAHKAYENTALPIGAGQTISQPYMVARMTELLQ--LTPTSRVLEIGTGSG 87
Query: 63 YLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRH---L 119
Y TA LA++ V ++ + A+ +K +D N RH
Sbjct: 88 YQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDLHNVST--------------RHGDGW 133
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
L G I E LL+QL GG +V+PVGE F Q L + + + Y I
Sbjct: 134 LGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQF--QTLKYVQRRNNEYHI 191
Query: 180 VTTVVRGVRTNPLYR 194
T V VR PL +
Sbjct: 192 ET--VEAVRFVPLVK 204
>sp|A9R115|PIMT_YERPG Protein-L-isoaspartate O-methyltransferase OS=Yersinia pestis bv.
Antiqua (strain Angola) GN=pcm PE=3 SV=1
Length = 208
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 4 VDRKNFFTRVV-NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSG 62
V R+ F + ++ Y + IG G IS P++ A+M ELL+ + P +R+L+IG+GSG
Sbjct: 30 VPRERFVDEALAHKAYENTALPIGAGQTISQPYMVARMTELLQ--LTPTSRVLEIGTGSG 87
Query: 63 YLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRH---L 119
Y TA LA++ V ++ + A+ +K +D N RH
Sbjct: 88 YQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDLHNVST--------------RHGDGW 133
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
L G I E LL+QL GG +V+PVGE F Q L + + + Y I
Sbjct: 134 LGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQF--QTLKYVQRRNNEYHI 191
Query: 180 VTTVVRGVRTNPLYR 194
T V VR PL +
Sbjct: 192 ET--VEAVRFVPLVK 204
>sp|Q8ZBQ0|PIMT_YERPE Protein-L-isoaspartate O-methyltransferase OS=Yersinia pestis
GN=pcm PE=3 SV=1
Length = 208
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 4 VDRKNFFTRVV-NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSG 62
V R+ F + ++ Y + IG G IS P++ A+M ELL+ + P +R+L+IG+GSG
Sbjct: 30 VPRERFVDEALAHKAYENTALPIGAGQTISQPYMVARMTELLQ--LTPTSRVLEIGTGSG 87
Query: 63 YLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRH---L 119
Y TA LA++ V ++ + A+ +K +D N RH
Sbjct: 88 YQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDLHNVST--------------RHGDGW 133
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
L G I E LL+QL GG +V+PVGE F Q L + + + Y I
Sbjct: 134 LGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQF--QTLKYVQRRNNEYHI 191
Query: 180 VTTVVRGVRTNPLYR 194
T V VR PL +
Sbjct: 192 ET--VEAVRFVPLVK 204
>sp|B2K581|PIMT_YERPB Protein-L-isoaspartate O-methyltransferase OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=pcm
PE=3 SV=1
Length = 208
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 4 VDRKNFFTRVV-NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSG 62
V R+ F + ++ Y + IG G IS P++ A+M ELL+ + P +R+L+IG+GSG
Sbjct: 30 VPRERFVDEALAHKAYENTALPIGAGQTISQPYMVARMTELLQ--LTPTSRVLEIGTGSG 87
Query: 63 YLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRH---L 119
Y TA LA++ V ++ + A+ +K +D N RH
Sbjct: 88 YQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDLHNVST--------------RHGDGW 133
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
L G I E LL+QL GG +V+PVGE F Q L + + + Y I
Sbjct: 134 LGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQF--QTLKYVQRRNNEYHI 191
Query: 180 VTTVVRGVRTNPLYR 194
T V VR PL +
Sbjct: 192 ET--VEAVRFVPLVK 204
>sp|Q1C474|PIMT_YERPA Protein-L-isoaspartate O-methyltransferase OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=pcm PE=3 SV=1
Length = 208
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 4 VDRKNFFTRVV-NEPYRIKSRQIGYGADISSPHIHAQMLELLKDKIKPGARILDIGSGSG 62
V R+ F + ++ Y + IG G IS P++ A+M ELL+ + P +R+L+IG+GSG
Sbjct: 30 VPRERFVDEALAHKAYENTALPIGAGQTISQPYMVARMTELLQ--LTPTSRVLEIGTGSG 87
Query: 63 YLTACLAYMAGPEGRVYGVEHVMELAESSIKNIDKGNSELLDQGRVQFVAYFWLRH---L 119
Y TA LA++ V ++ + A+ +K +D N RH
Sbjct: 88 YQTAILAHLVDHVCSVERIKGLQWQAKRRLKQLDLHNVST--------------RHGDGW 133
Query: 120 LLTNPHGSTRVIQSCWTKEEYNSWLLDQLVPGGRMVMPVGEPFKGQNLTIIDKLADGYTI 179
L G I E LL+QL GG +V+PVGE F Q L + + + Y I
Sbjct: 134 LGWQSRGPFDAIIVTAAPPEIPDALLEQLDEGGILVLPVGEQF--QTLKYVQRRNNEYHI 191
Query: 180 VTTVVRGVRTNPLYR 194
T V VR PL +
Sbjct: 192 ET--VEAVRFVPLVK 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,169,006
Number of Sequences: 539616
Number of extensions: 3521397
Number of successful extensions: 12515
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 379
Number of HSP's that attempted gapping in prelim test: 11464
Number of HSP's gapped (non-prelim): 1075
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)