BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10576
(151 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WUU9|MCM3A_MOUSE 80 kDa MCM3-associated protein OS=Mus musculus GN=Mcm3ap PE=2 SV=2
Length = 1971
Score = 160 bits (406), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/136 (50%), Positives = 94/136 (69%)
Query: 10 NVSQWYDFLWDRLRGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDASIFDEKI 69
++ WYDF+W+R RGIRKDI QQ LC T +++E+C RFHI C +C E S FD KI
Sbjct: 708 SLRDWYDFVWNRTRGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKI 767
Query: 70 NTENLNNCLQSLIHMYDDLHAQGLVCPNEPEFRAYEILLKLNRGDIIWEFQQLSPHLQTA 129
N EN+ CLQSL MY DL +G+ C +E EF+ Y +LL LN+GDI+ E QQ P ++ +
Sbjct: 768 NNENMTKCLQSLKEMYQDLRNKGVFCASEAEFQGYNVLLNLNKGDILREVQQFHPDVRNS 827
Query: 130 PEILFSLRVFSAFNNN 145
PE+ F+++ F+A N+N
Sbjct: 828 PEVNFAVQAFAALNSN 843
>sp|O60318|MCM3A_HUMAN 80 kDa MCM3-associated protein OS=Homo sapiens GN=MCM3AP PE=1 SV=2
Length = 1980
Score = 157 bits (398), Expect = 2e-38, Method: Composition-based stats.
Identities = 67/136 (49%), Positives = 93/136 (68%)
Query: 10 NVSQWYDFLWDRLRGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDASIFDEKI 69
++ WYDF+W+R RGIRKDI QQ LC T +++E+C RFHI C +C E S FD KI
Sbjct: 715 SLRDWYDFVWNRTRGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKI 774
Query: 70 NTENLNNCLQSLIHMYDDLHAQGLVCPNEPEFRAYEILLKLNRGDIIWEFQQLSPHLQTA 129
N EN+ CLQSL MY DL +G+ C +E EF+ Y +LL LN+GDI+ E QQ P ++ +
Sbjct: 775 NNENMTKCLQSLKEMYQDLRNKGVFCASEAEFQGYNVLLSLNKGDILREVQQFHPAVRNS 834
Query: 130 PEILFSLRVFSAFNNN 145
E+ F+++ F+A N+N
Sbjct: 835 SEVKFAVQAFAALNSN 850
>sp|Q9U3V9|XMAS2_DROME Protein xmas-2 OS=Drosophila melanogaster GN=xmas-2 PE=1 SV=3
Length = 1370
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 89/139 (64%)
Query: 7 PDINVSQWYDFLWDRLRGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDASIFD 66
P ++ W+ F+WDR R IRK+I QQ+LCS+ ++EQCARFHI C RL D S+FD
Sbjct: 283 PQSHMGDWFHFVWDRTRSIRKEITQQELCSLGAVKLVEQCARFHIHCAARLVDADPSVFD 342
Query: 67 EKINTENLNNCLQSLIHMYDDLHAQGLVCPNEPEFRAYEILLKLNRGDIIWEFQQLSPHL 126
KIN ENL CLQ+L +MY DL +G+ CP E EFR Y +LL L + +W+ QL L
Sbjct: 343 SKINAENLTKCLQTLKYMYHDLRIKGVPCPKEAEFRGYIVLLNLADANFLWDIGQLPAEL 402
Query: 127 QTAPEILFSLRVFSAFNNN 145
Q+ PE+ +++ + A +
Sbjct: 403 QSCPEVRQAIQFYLALQDT 421
>sp|O74889|SAC31_SCHPO SAC3 family protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC576.05 PE=1 SV=1
Length = 1024
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 17 FLWDRLRGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDASIFDEKINTENL-N 75
F+ DR R IR+D Q ++ E+ AR+HILC +LC + F + E L
Sbjct: 192 FVRDRTRSIRQDFTLQNCRDLDAVACHERIARYHILCIHQLC--EKKQFSAQQEVEQLRK 249
Query: 76 NCLQSLIHMYDDLHAQGLVCPNEPEFRAYEILLKLNRGDIIWEFQQL 122
LQSL YDDL + CPNEPEFR+Y I+ L D++ + Q L
Sbjct: 250 GILQSLCEFYDDLRKVKIRCPNEPEFRSYAIITHLRDPDVVRQSQIL 296
>sp|P46674|SAC3_YEAST Nuclear mRNA export protein SAC3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAC3 PE=1 SV=2
Length = 1301
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 17 FLWDRLRGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDASIFDEKINTENLNN 76
FLWDR+R IR+D Q + E+ R H+L + + F + E L+
Sbjct: 282 FLWDRMRSIRQDFTYQNYSGPEAVDCNERIVRIHLLILHIMVKSNVE-FSLQQELEQLHK 340
Query: 77 CLQSLIHMYDDLHAQGLVCPNEPEFRAYEILLKLNRGDIIWEFQQLSPHL 126
L +L +YDD+ + G CPNE EFRAY +L K+ Q+L H+
Sbjct: 341 SLITLSEIYDDVRSSGGTCPNEAEFRAYALLSKIRDPQYDENIQRLPKHI 390
>sp|Q9USI4|SAC32_SCHPO SAC3 family protein 2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC70.06 PE=3 SV=1
Length = 458
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 17 FLWDRLRGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDASIFDEKINTENLNN 76
F+ DR R +R+D Q S ++ E ARFHI+ L F + E L+
Sbjct: 157 FVRDRTRAVRQDFSVQSSFSQDSVYCHELIARFHIISLHELA--HTPNFSRQQEIEQLSK 214
Query: 77 CLQ---SLIHMYDDLHAQGLVCPNEPEFRAYEILLKLNRGDIIWEFQQLSPHLQTAPEIL 133
++ +L +YD +H + C +E EFRAY +LL L + + + P +
Sbjct: 215 SMEILYTLGQLYDYMHLRKEHCTHEAEFRAYMVLLSLGDPSVGLDTLSWPDFVFKKPIVK 274
Query: 134 FSLRVFSAFNNNLYSLS 150
SL+++S N ++++
Sbjct: 275 TSLKLYSLAQRNNHTIT 291
>sp|Q96PV6|LENG8_HUMAN Leukocyte receptor cluster member 8 OS=Homo sapiens GN=LENG8 PE=2
SV=2
Length = 779
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 23/133 (17%)
Query: 13 QWYDFLWDRLRGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDASIFDEKINTE 72
Q Y F ++++ IR+D+ Q + + T + E AR + EK + E
Sbjct: 557 QDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHARIAL---------------EKGDHE 601
Query: 73 NLNNCLQSLIHMYDDLHAQGLVCPNEPEFRAYEILLKL---NRGDIIWEFQQLSPHLQTA 129
N C L +Y A+ L N EF AY IL + N GDI E L+ L+
Sbjct: 602 EFNQCQTQLKSLY----AENLP-GNVGEFTAYRILYYIFTKNSGDITTELAYLTRELKAD 656
Query: 130 PEILFSLRVFSAF 142
P + +L + +A+
Sbjct: 657 PCVAHALALRTAW 669
>sp|Q6CEJ6|CCR4_YARLI Glucose-repressible alcohol dehydrogenase transcriptional effector
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CCR4
PE=3 SV=1
Length = 705
Score = 38.1 bits (87), Expect = 0.021, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 67 EKINTENLNNCLQSLIHMY---DDLHAQGLVCPNEPEFRAYEILLKL--NRGDI------ 115
+++ E +Q H Y D+ QGL+C + P FR+YE LLKL N +
Sbjct: 136 DQLEEERQMTLMQQEKHQYWADLDMSGQGLMCLSPPLFRSYEFLLKLYINHNKLTTLPPA 195
Query: 116 IWEFQQL-----SPHLQTA--PEI--LFSLRVFSAFNNNLYSL 149
I +QL S ++ T PEI L +LR AF+N L +L
Sbjct: 196 IRSLRQLRVLDVSSNMLTKLPPEIGMLHNLRYLFAFDNYLSTL 238
>sp|Q8CBY3|LENG8_MOUSE Leukocyte receptor cluster member 8 homolog OS=Mus musculus
GN=Leng8 PE=1 SV=1
Length = 785
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 23/121 (19%)
Query: 13 QWYDFLWDRLRGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDASIFDEKINTE 72
Q Y F ++++ IR+D+ Q + + T + E AR + EK + E
Sbjct: 595 QDYAFACEQMKSIRQDLTVQGIRTEFTVEVYETHARIAL---------------EKGDHE 639
Query: 73 NLNNCLQSLIHMYDDLHAQGLVCPNEPEFRAYEILLKL---NRGDIIWEFQQLSPHLQTA 129
N C L +Y A+ L N EF AY IL + N GDI E L+ ++
Sbjct: 640 EFNQCQTQLKSLY----AENLA-GNVGEFTAYRILYYIFTKNSGDITTELAYLTREMKAD 694
Query: 130 P 130
P
Sbjct: 695 P 695
>sp|B4SEI4|CLPX_PELPB ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pelodictyon
phaeoclathratiforme (strain DSM 5477 / BU-1) GN=clpX
PE=3 SV=1
Length = 438
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 23 RGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDASI----FDEKINTENLNNCL 78
+G RK +QQL ++NT NIL C D+L + S F K+ T +
Sbjct: 243 KGGRKH-PEQQLININTKNILFICG-GAFEGLDKLIAKRVSKSSMGFGAKVKTTQIGYDP 300
Query: 79 QSL-IHMYDDLHAQGLVCPNEPEF 101
+ L + M DDLH GL+ PEF
Sbjct: 301 EILKLVMQDDLHEYGLI----PEF 320
>sp|C4K351|GLMU_HAMD5 Bifunctional protein GlmU OS=Hamiltonella defensa subsp.
Acyrthosiphon pisum (strain 5AT) GN=glmU PE=3 SV=1
Length = 455
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Query: 37 VNTANILEQCARFHILCFDRLCGEDASIFDEKINTENLNNCLQ 79
+NTAN L+ C R H++ G ++ EK+N E LN LQ
Sbjct: 40 INTANQLD-CTRIHLVY-----GHGGALLKEKLNNEKLNWILQ 76
>sp|A6H687|SAC31_MOUSE SAC3 domain-containing protein 1 OS=Mus musculus GN=Sac3d1 PE=1
SV=1
Length = 427
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 4/139 (2%)
Query: 8 DINVSQWYDFLWDRLRGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDA-SIFD 66
D++ ++ F+ DRLR +R D+ Q + + A +LE + R+ E+ D
Sbjct: 163 DVSCAEVASFVADRLRAVRLDLSLQGVDDADAATVLEAALATLLAVVARVRPEETRGAAD 222
Query: 67 EKINTENLNNCLQSLIHMYDDLHAQGLVCPNEPEFRAYEILLKLNRGDIIWEFQQLSPHL 126
+ + SL Y +G P + F+ +L L + + E QL L
Sbjct: 223 PVLLQTQVQEGFGSLRRCY--ARGKGPY-PRQAAFQGLFLLYNLGSVEALQEVLQLPAAL 279
Query: 127 QTAPEILFSLRVFSAFNNN 145
+ P + +L V +AF +
Sbjct: 280 RACPPLQAALAVDAAFRED 298
>sp|P50076|ALG10_YEAST Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol
alpha-1,2-glucosyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DIE2 PE=1
SV=2
Length = 525
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 57 LCGEDASIFDEKINTENLNNCLQSLIHMYDDLHAQGLVCPNEPEFRAYEILLKLNR 112
L E +I ++ NT NN L+ IH DD LV P F + I L NR
Sbjct: 226 LAVERPAILQKQFNTHTFNNYLKLFIHAIDDF--SNLVLPYMINFVLFFIYLIWNR 279
>sp|B9G2A8|BIG_ORYSJ Auxin transport protein BIG OS=Oryza sativa subsp. japonica
GN=Os09g0247700 PE=2 SV=1
Length = 4965
Score = 30.0 bits (66), Expect = 5.1, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 70 NTENLNNCLQSLI--HMYDDLHAQGLVCPNEPEFRAYEIL 107
+TE LN CL S + ++D LH+Q + N P R Y L
Sbjct: 3135 DTELLNKCLTSDVVSCIFDTLHSQNELLANHPNSRIYNTL 3174
>sp|A6NKF1|SAC31_HUMAN SAC3 domain-containing protein 1 OS=Homo sapiens GN=SAC3D1 PE=1
SV=2
Length = 404
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 8/141 (5%)
Query: 8 DINVSQWYDFLWDRLRGIRKDIVQQQLCSVNTANILEQCARFHILCFDRLCGEDAS--IF 65
DI ++ F+ DRLR + D+ Q A +LE + RL G DA+
Sbjct: 137 DIARAEVASFVADRLRAVLLDLALQGAGDAEAAVVLEAALATLLTVVARL-GPDAARGPA 195
Query: 66 DEKINTENLNNCLQSLIHMYDDLHAQGLVC-PNEPEFRAYEILLKLNRGDIIWEFQQLSP 124
D + + SL Y A+G P +P F+ +L L + + E QL
Sbjct: 196 DPVLLQAQVQEGFGSLRRCY----ARGAGPHPRQPAFQGLFLLYNLGSVEALHEVLQLPA 251
Query: 125 HLQTAPEILFSLRVFSAFNNN 145
L+ P + +L V +AF
Sbjct: 252 ALRACPPLRKALAVDAAFREG 272
>sp|Q83046|P34_LIYV9 RNA-binding P34 protein OS=Lettuce infectious yellows virus
(isolate United States/92) PE=1 SV=2
Length = 292
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 17/72 (23%)
Query: 35 CSVNTANIL----EQCARFHILC-----------FDRLCG--EDASIFDEKINTENLNNC 77
C ++TA L + CA + + C +LCG D S F I +NL +C
Sbjct: 14 CVIDTAYRLAVPTQHCAIYTVACRILFLSVGFMTIVKLCGFKMDTSSFIASIEKDNLMDC 73
Query: 78 LQSLIHMYDDLH 89
L SL+ M D L
Sbjct: 74 LISLVEMRDRLR 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,401,370
Number of Sequences: 539616
Number of extensions: 2149818
Number of successful extensions: 5450
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 5440
Number of HSP's gapped (non-prelim): 21
length of query: 151
length of database: 191,569,459
effective HSP length: 107
effective length of query: 44
effective length of database: 133,830,547
effective search space: 5888544068
effective search space used: 5888544068
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)