BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10577
(203 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1 OS=Homo sapiens GN=MCRS1 PE=1 SV=1
Length = 462
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 132/180 (73%), Gaps = 11/180 (6%)
Query: 18 YVDGRPIIASNKYKLNHNSIIE-----------KELKKVEEEMKNWAVIVDHVTGSNTPE 66
+ D +I +K K + ++E +E++++E+E+ W V+VD +TG ++P+
Sbjct: 281 FSDAEDLIDDSKLKDMRDEVLEHELMVADRRQKREIRQLEQELHKWQVLVDSITGMSSPD 340
Query: 67 LDKQTYAVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQACIRMRNNG 126
D QT AVLRGR VRYLM+ R++TLGR+T D+ +D+DLSLEGPAWK+SR+Q I+++NNG
Sbjct: 341 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNG 400
Query: 127 DFFIANEGKRPIYVDGRPIIASNKYKLNHNSIIEIAGLHFTFLVNQSLIQSLRADPKGTT 186
DFFIANEG+RPIY+DGRP++ +K++L++NS++EIA L F FL+NQ LI +RA+ T
Sbjct: 401 DFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLIALIRAEAAKIT 460
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 37/39 (94%)
Query: 1 MRNNGDFFIANEGKRPIYVDGRPIIASNKYKLNHNSIIE 39
++NNGDFFIANEG+RPIY+DGRP++ +K++L++NS++E
Sbjct: 396 LKNNGDFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVE 434
>sp|Q99L90|MCRS1_MOUSE Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1
Length = 462
Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 131/180 (72%), Gaps = 11/180 (6%)
Query: 18 YVDGRPIIASNKYKLNHNSIIE-----------KELKKVEEEMKNWAVIVDHVTGSNTPE 66
+ D +I +K K + ++E +E++++E+E+ W V+VD +TG +P+
Sbjct: 281 FSDAEDLIDDSKLKDMRDEVLEHELTVADRRQKREIRQLEQELHKWQVLVDSITGMGSPD 340
Query: 67 LDKQTYAVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQACIRMRNNG 126
D QT AVLRGR VRYLM+ R++TLGR+T D+ +D+DLSLEGPAWK+SR+Q I+++NNG
Sbjct: 341 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNG 400
Query: 127 DFFIANEGKRPIYVDGRPIIASNKYKLNHNSIIEIAGLHFTFLVNQSLIQSLRADPKGTT 186
DFFIANEG+RPIY+DGRP++ +K++L++NS++EIA L F FL+NQ LI +RA+ T
Sbjct: 401 DFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLIALIRAEAAKIT 460
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 37/39 (94%)
Query: 1 MRNNGDFFIANEGKRPIYVDGRPIIASNKYKLNHNSIIE 39
++NNGDFFIANEG+RPIY+DGRP++ +K++L++NS++E
Sbjct: 396 LKNNGDFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVE 434
>sp|Q01167|FOXK2_HUMAN Forkhead box protein K2 OS=Homo sapiens GN=FOXK2 PE=1 SV=3
Length = 660
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 24/91 (26%)
Query: 73 AVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQ--------------- 117
A L GR YLMK R VT+GR+++ SVD+ + G + +SRR
Sbjct: 38 ARLEGREFEYLMKKRSVTIGRNSSQGSVDVSM---GHSSFISRRHLEIFTPPGGGGHGGA 94
Query: 118 ------ACIRMRNNGDFFIANEGKRPIYVDG 142
A R GDF++ GK ++VDG
Sbjct: 95 APELPPAQPRPDAGGDFYLRCLGKNGVFVDG 125
>sp|O60129|FKH2_SCHPO Fork head protein homolog 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fkh2 PE=1 SV=1
Length = 642
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 70 QTYAVLRGRAVRYLMKFRDVTLGRSTADHSVD--------IDLSLEGPAWKVSRRQACIR 121
Q YA G Y +K + LGR A+ S ID++ GP+ VSR+ A +
Sbjct: 77 QAYAKFAGSTWTYYVKKIRIILGREPANPSPKGKNEDLEVIDMNF-GPSKVVSRKHAVVE 135
Query: 122 MR-NNGDFFIANEGKRPIYVDGRPIIASNKYKLNHNSIIEIAGLHFTFLV 170
++ + + G+ I VDG+ KL SI+E+AGL F++
Sbjct: 136 YDLDDQTWNCSVYGRNGIKVDGKLFKNGETVKLTSGSILEVAGLQMMFVL 185
>sp|Q3UCQ1|FOXK2_MOUSE Forkhead box protein K2 OS=Mus musculus GN=Foxk2 PE=2 SV=3
Length = 651
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 21/88 (23%)
Query: 73 AVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQACI------------ 120
A L GR YLMK R VT+GR+++ SVD+ + G + +SRR I
Sbjct: 32 ARLEGREFEYLMKKRSVTIGRNSSQGSVDVSM---GHSSFISRRHLEIFTPPGGGHSAAA 88
Query: 121 ------RMRNNGDFFIANEGKRPIYVDG 142
R GDF++ GK ++VDG
Sbjct: 89 PEPAQPRPDAGGDFYLRCLGKNGVFVDG 116
>sp|O14270|FHL1_SCHPO Fork head transcription factor 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fhl1 PE=4 SV=2
Length = 743
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 70 QTYAVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQACIRMR-NNGDF 128
Q YA L + ++ VT+GR A +S D D+ L G +SR+ A I N F
Sbjct: 20 QAYAKLEFEKFSFFVQTLQVTMGRK-ASNSSDCDVHL-GDTKAISRQHAKIFYSFPNQRF 77
Query: 129 FIANEGKRPIYVDGRPIIASNKYKLNHNSIIEIAGLHFTFLV 170
I+ GK +VDG + L + ++I + F+FL+
Sbjct: 78 EISVMGKNGAFVDGEFVERGKSVPLRSGTRVQIGQISFSFLL 119
>sp|Q7ZX03|FOXK2_XENLA Forkhead box protein K2 OS=Xenopus laevis GN=foxk2 PE=2 SV=2
Length = 642
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 73 AVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQACIRM--------RN 124
A L GR YLMK R VT+GR+++ VD+ + G + +SRR I + +
Sbjct: 14 ARLEGREFEYLMKKRSVTIGRNSSQGCVDVSM---GHSSFISRRHLEIFIGGSGDGDDAD 70
Query: 125 NGDFFIANEGKRPIYVDG 142
GDF++ GK ++VDG
Sbjct: 71 VGDFYLRCLGKNGVFVDG 88
>sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1
Length = 733
Score = 37.4 bits (85), Expect = 0.061, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 73 AVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQACIRMRNNGDFFIAN 132
A L GR +LM+ VT+GR+++ SVD+ + L +SRR + + F++
Sbjct: 107 ARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSS---FISRRHLQLSFQEP-HFYLRC 162
Query: 133 EGKRPIYVDG 142
GK ++VDG
Sbjct: 163 LGKNGVFVDG 172
>sp|P42128|FOXK1_MOUSE Forkhead box protein K1 OS=Mus musculus GN=Foxk1 PE=1 SV=2
Length = 719
Score = 37.4 bits (85), Expect = 0.076, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 73 AVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQACIRMRNNGDFFIAN 132
A L GR +LM+ VT+GR+++ SVD+ + L +SRR + + F++
Sbjct: 93 ARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSS---FISRRHLQLSFQEP-HFYLRC 148
Query: 133 EGKRPIYVDG 142
GK ++VDG
Sbjct: 149 LGKNGVFVDG 158
>sp|P39521|FHL1_YEAST Pre-rRNA-processing protein FHL1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FHL1 PE=1 SV=1
Length = 936
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 72 YAVLRGRAVRYLMKFRDVTLGRSTAD---HSVDIDLSLEGPAWKVSRRQACIRMR-NNGD 127
YA L ++ + ++ +GR + + H VD++L GP+ +SRR A I G
Sbjct: 283 YARLDFQSFTFYVQTLHAIIGRRSENDFSHKVDVNL---GPSKSISRRHAQIFYNFGTGR 339
Query: 128 FFIANEGKRPIYVDGRPIIASNKYKLNHNSIIEIAGLHFTFLV 170
F ++ GK +VD + N L + + I+I + F F++
Sbjct: 340 FELSIIGKNGAFVDDIFVEKGNTVPLRNKTKIQIGQIPFQFIL 382
>sp|Q8VYZ2|PPA8_ARATH Purple acid phosphatase 8 OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1
Length = 335
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 11 NEGKRPIYVDGRPIIASNKYKLNHNSIIEKELKKVEEEMKNWAVIVDHVT------GSNT 64
+E K +Y D R ++ NKY NS++ ++E M W ++V H T NT
Sbjct: 174 DEPKDHVY-DWRGVLPRNKYL---NSLLTDVDVALQESMAKWKIVVGHHTIKSAGHHGNT 229
Query: 65 PELDKQTYAVLRGRAVRYLMKFRDVTL 91
EL+KQ +L V + D L
Sbjct: 230 IELEKQLLPILEANEVDLYINGHDHCL 256
>sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2
SV=2
Length = 466
Score = 33.9 bits (76), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 38 IEKELKKVEEEMKNWAVIVDHVTGSNTPELDKQTYAVLRGRAVRYLMKFRDVTLGRSTAD 97
+E+ELKKV E W +++ H +P + Y + G ++R + + V +
Sbjct: 294 LEQELKKVNREETPWLIVMVH-----SPWYNSNNYHYMEGESMRAMFESWFV-------N 341
Query: 98 HSVDIDLSLEGPAWKVSRRQACIRMR-NNGDFFIANEGKRPIYV 140
VD+ LS +++ S R + I+ NG + + PIY+
Sbjct: 342 SKVDLVLSGHVHSYERSERVSNIKYNITNGLSYPVKDPSAPIYI 385
>sp|Q43794|SYE_TOBAC Glutamate--tRNA ligase, chloroplastic/mitochondrial OS=Nicotiana
tabacum PE=2 SV=1
Length = 569
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 58 HVTGSNTPELDKQTYAVLRGRAVRYLMKFRDVTLGRST--ADHSVDIDLSLEGPAW 111
HV G+ T + Y R + +++++ D L RST ++ +V DLS GPAW
Sbjct: 69 HVGGARTALFN---YLYARAKGGKFILRIEDTDLERSTKESEEAVLRDLSWLGPAW 121
>sp|Q71XF9|CLPB_LISMF Chaperone protein ClpB OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=clpB PE=3 SV=1
Length = 866
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 32/155 (20%)
Query: 48 EMKNWAVIVDHVTGSN-----------TPELDKQTYAVLRGR-AVRYLMKFRDVTLGR-- 93
+ KN +I+ GSN +PEL+ +L+ +L + D+ L +
Sbjct: 714 DFKNTVIIMTSNIGSNLLLERTEEGEISPELESDVMQILQSEFKPEFLNRVDDIILFKPL 773
Query: 94 STADHSVDIDLSLEGPAWKVSRRQACIRMRNNGDFFIANEGKRPIYVDGRPI-------- 145
+ AD ++ +E +++ ++ I + +N FIA E P+Y RP+
Sbjct: 774 TLADIKGIVEKLVEELQIRLADQEITITISDNAKAFIAEEAYDPVY-GARPLKRYIVRHV 832
Query: 146 -------IASNKYKLNHNSI-IEIAGLHFTFLVNQ 172
I S K + H+S+ I++A FTF V +
Sbjct: 833 ETPLAREIVSGKI-MPHSSVEIDLADKEFTFKVTE 866
>sp|Q9DE49|PGFRA_DANRE Platelet-derived growth factor receptor alpha OS=Danio rerio
GN=pdgfra PE=2 SV=1
Length = 1059
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 33/81 (40%)
Query: 71 TYAVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQACIRMRNNGDFFI 130
T G V YL K RD L R T D+D+ PA + SR + + GD+
Sbjct: 649 TEYCFYGDLVNYLHKNRDGFLSRHTEKGKKDLDIFGINPADESSRSYVILSLEGKGDYMD 708
Query: 131 ANEGKRPIYVDGRPIIASNKY 151
+ YV + ++KY
Sbjct: 709 MKQADTMQYVPMLEMNEASKY 729
>sp|P20786|PGFRA_RAT Platelet-derived growth factor receptor alpha OS=Rattus norvegicus
GN=Pdgfra PE=1 SV=2
Length = 1088
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 28/70 (40%)
Query: 71 TYAVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQACIRMRNNGDFFI 130
T G V YL K RD + R D+D+ PA + +R + NNGD+
Sbjct: 673 TEYCFYGDLVNYLHKNRDSFMSRHPEKPKKDLDIFGLNPADESTRSYVILSFENNGDYVD 732
Query: 131 ANEGKRPIYV 140
+ YV
Sbjct: 733 MKQADTTQYV 742
>sp|Q44045|NIFD_ALCFA Nitrogenase molybdenum-iron protein alpha chain OS=Alcaligenes
faecalis GN=nifD PE=3 SV=1
Length = 489
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 33/130 (25%)
Query: 12 EGKRP-IYVDG---RPIIASNK----------YKLNHNSIIEKELKKVEEEMKNWAVIVD 57
EGKR +YV G R +I + K Y HN ++ LK EM N ++ D
Sbjct: 344 EGKRVMLYVGGLLPRHVIGAYKDLGIELVGTGYGFGHNDDYDRTLK----EMGNATLLYD 399
Query: 58 HVTGSNTPELDKQTYAVLRGRAV--RYLMK-----FRDV-TLGRSTADHSVDI------- 102
VTG E K+ L G + +Y+ + FR + + S H D+
Sbjct: 400 DVTGYEFEEFVKRINPDLIGSGIKEKYIFQKMGIPFRQMHSWDYSGPYHGFDVAIFARNM 459
Query: 103 DLSLEGPAWK 112
D++L P WK
Sbjct: 460 DMTLNNPCWK 469
>sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1
Length = 466
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 38 IEKELKKVEEEMKNWAVIVDHVTGSNTPELDKQTYAVLRGRAVRYLMKFRDVTLGRSTAD 97
+E+ELK V E W +++ H +P + Y + G ++R V +
Sbjct: 294 LEQELKNVNREETPWLIVIVH-----SPWYNSNNYHYMEGESMR-------VMFESWLVN 341
Query: 98 HSVDIDLSLEGPAWKVSRRQACIRMR-NNGDFFIANEGKRPIYV 140
VD+ LS A++ S R + I+ NG + PIY+
Sbjct: 342 SKVDLVLSGHVHAYERSERISNIKYNITNGLSSPVKDPNAPIYI 385
>sp|P26618|PGFRA_MOUSE Platelet-derived growth factor receptor alpha OS=Mus musculus
GN=Pdgfra PE=1 SV=3
Length = 1089
Score = 30.4 bits (67), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 28/70 (40%)
Query: 71 TYAVLRGRAVRYLMKFRDVTLGRSTADHSVDIDLSLEGPAWKVSRRQACIRMRNNGDFFI 130
T G V YL K RD + + D+D+ PA + +R + NNGD+
Sbjct: 674 TEYCFYGDLVNYLHKNRDSFMSQHPEKPKKDLDIFGLNPADESTRSYVILSFENNGDYMD 733
Query: 131 ANEGKRPIYV 140
+ YV
Sbjct: 734 MKQADTTQYV 743
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,528,708
Number of Sequences: 539616
Number of extensions: 2950638
Number of successful extensions: 9845
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 9822
Number of HSP's gapped (non-prelim): 37
length of query: 203
length of database: 191,569,459
effective HSP length: 112
effective length of query: 91
effective length of database: 131,132,467
effective search space: 11933054497
effective search space used: 11933054497
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)