BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10581
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RC06|CTNL1_PONAB Alpha-catulin OS=Pongo abelii GN=CTNNAL1 PE=2 SV=1
Length = 734
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
++GTE L++ HAE ++ Q+++AA TL HPSSKIAKENL+VF + W++ +SD++
Sbjct: 457 ISGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDMS 516
Query: 61 TLCKEIMD--KERIPDKHTYMSLPRP 84
TL +EI D + R +K+ Y+SLP+P
Sbjct: 517 TLLREINDVFEGRRGEKYGYLSLPKP 542
>sp|Q9UBT7|CTNL1_HUMAN Alpha-catulin OS=Homo sapiens GN=CTNNAL1 PE=1 SV=2
Length = 734
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
++GTE L++ HAE ++ Q+++AA TL HPSSKIAKENL+VF + W++ +SD++
Sbjct: 457 ISGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQISDMS 516
Query: 61 TLCKEIMD--KERIPDKHTYMSLPRP 84
TL +EI D + R +K+ Y+SLP+P
Sbjct: 517 TLLREINDVFEGRRGEKYGYLSLPKP 542
>sp|O88327|CTNL1_MOUSE Alpha-catulin OS=Mus musculus GN=Ctnnal1 PE=2 SV=1
Length = 731
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDIT 60
++GTE L++ HAE ++ Q+++AA TL HPSSKIAKENL+VF + W++ +SD+
Sbjct: 456 ISGTEPLEITCIHAEETFQVTGQQIISAAETLTLHPSSKIAKENLDVFCEAWESQMSDMA 515
Query: 61 TLCKEIMD--KERIPDKHTYMSLPRP 84
TL +EI D + R ++ ++SLP+P
Sbjct: 516 TLLREISDVFEGRRGERCDHLSLPKP 541
>sp|Q6GLP0|CTNA2_XENLA Catenin alpha-2 OS=Xenopus laevis GN=ctnna2 PE=2 SV=1
Length = 966
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
PQ++ AA TLA P SK+A++N++VF D W+ V +T +I
Sbjct: 472 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 515
>sp|P30997|CTNA2_CHICK Catenin alpha-2 OS=Gallus gallus GN=CTNNA2 PE=1 SV=1
Length = 906
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
PQ++ AA TLA P SK+A++N++VF D W+ V +T +I
Sbjct: 461 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 504
>sp|Q5R416|CTNA2_PONAB Catenin alpha-2 OS=Pongo abelii GN=CTNNA2 PE=2 SV=3
Length = 905
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
PQ++ AA TLA P SK+A++N++VF D W+ V +T +I
Sbjct: 460 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 503
>sp|Q61301|CTNA2_MOUSE Catenin alpha-2 OS=Mus musculus GN=Ctnna2 PE=1 SV=3
Length = 953
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
PQ++ AA TLA P SK+A++N++VF D W+ V +T +I
Sbjct: 460 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 503
>sp|A4IGI7|CTNA2_XENTR Catenin alpha-2 OS=Xenopus tropicalis GN=ctnna2 PE=2 SV=1
Length = 966
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
PQ++ AA TLA P SK+A++N++VF D W+ V +T +I
Sbjct: 472 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 515
>sp|P26232|CTNA2_HUMAN Catenin alpha-2 OS=Homo sapiens GN=CTNNA2 PE=1 SV=5
Length = 953
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
PQ++ AA TLA P SK+A++N++VF D W+ V +T +I
Sbjct: 460 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEAVDDI 503
>sp|B7ZC77|CTNA2_DANRE Catenin alpha-2 OS=Danio rerio GN=Ctnna2 PE=2 SV=1
Length = 865
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
PQ++ AA TLA P SK+A++N++VF D W+ V +T +I
Sbjct: 420 PQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRILTEAVDDI 463
>sp|Q3MHM6|CTNA1_BOVIN Catenin alpha-1 OS=Bos taurus GN=CTNNA1 PE=2 SV=1
Length = 906
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 17 HLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
L+ PQ++ AA LA P SK+A+EN+++F + W+ V +T +I
Sbjct: 456 QLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDI 505
>sp|Q59I72|CTNA1_RABIT Catenin alpha-1 OS=Oryctolagus cuniculus GN=CTNNA1 PE=3 SV=1
Length = 907
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 17 HLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
L+ PQ++ AA LA P SK+A+EN+++F + W+ V +T +I
Sbjct: 457 QLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDI 506
>sp|P26231|CTNA1_MOUSE Catenin alpha-1 OS=Mus musculus GN=Ctnna1 PE=1 SV=1
Length = 906
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 17 HLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
L+ PQ++ AA LA P SK+A+EN+++F + W+ V +T +I
Sbjct: 456 QLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDI 505
>sp|P35221|CTNA1_HUMAN Catenin alpha-1 OS=Homo sapiens GN=CTNNA1 PE=1 SV=1
Length = 906
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 17 HLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
L+ PQ++ AA LA P SK+A+EN+++F + W+ V +T +I
Sbjct: 456 QLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDI 505
>sp|P90947|HMP1_CAEEL Protein humpback-1 OS=Caenorhabditis elegans GN=hmp-1 PE=1 SV=2
Length = 927
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 13 HAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEI 66
H L+ APQ+ AA L P+SK A+EN+E + + W V +TT I
Sbjct: 446 HTAAQLEKLAPQVAQAAILLCHQPTSKTAQENMETYKNAWFDKVRLLTTALDNI 499
>sp|Q65CL1|CTNA3_MOUSE Catenin alpha-3 OS=Mus musculus GN=Ctnna3 PE=1 SV=2
Length = 895
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 14 AEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQ-------ALVSDITTL 62
A HL+ PQ++ AA LA P S++ K +E++ W+ V DIT++
Sbjct: 448 AANHLETLCPQIINAALALASRPKSQVVKNTMEMYKRTWEHYIHVLTEAVDDITSI 503
>sp|P35220|CTNA_DROME Catenin alpha OS=Drosophila melanogaster GN=alpha-Cat PE=1 SV=2
Length = 917
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 1 MAGTETLQVATYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQA------ 54
M+ E +A ++ PQ++ AA L P+SK+A+EN+ + W+
Sbjct: 443 MSNNEDGVKMVRYAAAQIESLCPQVINAASILTVRPNSKVAQENMTTYRQAWEVQVRILT 502
Query: 55 -LVSDITTL 62
V DITT+
Sbjct: 503 EAVDDITTI 511
>sp|P26234|VINC_PIG Vinculin OS=Sus scrofa GN=VCL PE=1 SV=4
Length = 1135
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPD 74
PQ+V+AAR L +P ++ A E+ E + W V +T L E +D + + D
Sbjct: 674 PQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLD 725
>sp|P18206|VINC_HUMAN Vinculin OS=Homo sapiens GN=VCL PE=1 SV=4
Length = 1134
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPD 74
PQ+V+AAR L +P ++ A E+ E + W V +T L E +D + + D
Sbjct: 673 PQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLD 724
>sp|P12003|VINC_CHICK Vinculin OS=Gallus gallus GN=VCL PE=1 SV=4
Length = 1135
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPD 74
PQ+V+AAR L +P ++ A E+ E + W V +T L E +D + + D
Sbjct: 673 PQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLD 724
>sp|P85972|VINC_RAT Vinculin OS=Rattus norvegicus GN=Vcl PE=1 SV=1
Length = 1066
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPD 74
PQ+++AAR L +P ++ A E+ E + W V +T L E +D + + D
Sbjct: 673 PQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLD 724
>sp|Q64727|VINC_MOUSE Vinculin OS=Mus musculus GN=Vcl PE=1 SV=4
Length = 1066
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPD 74
PQ+++AAR L +P ++ A E+ E + W V +T L E +D + + D
Sbjct: 673 PQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLD 724
>sp|O46037|VINC_DROME Vinculin OS=Drosophila melanogaster GN=Vinc PE=1 SV=1
Length = 961
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMD 68
PQL++A R ++P SK A E+L+ + V + TLC + D
Sbjct: 559 PQLISAGRIRMNYPGSKAADEHLQNLKQQYADTVLRMRTLCDQATD 604
>sp|Q5B8K7|HIR3_EMENI Histone transcription regulator 3 homolog OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=hir3 PE=3 SV=1
Length = 2061
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 15 EYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKERIPD 74
E HL +YAP + A DH + + ++ L ++ + ++ ++ C E +++ERI
Sbjct: 724 ELHLDLYAP--MNAPNNETDHRTRTLQQDRLARWSMLARSALTHFIDCCPERVNRERITI 781
Query: 75 KHTYMS 80
+H + S
Sbjct: 782 RHIWAS 787
>sp|P49417|CAT_VIBAN Chloramphenicol acetyltransferase OS=Vibrio anguillarum GN=cat PE=3
SV=1
Length = 216
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 36 PSSKIAKENLEVFADMWQALVSDITTLCKEI-MDKERIPDKHTYMSLPRP 84
P I +++ E+F+++W + D T CK+ D ++ + M+ P P
Sbjct: 82 PCYTIFQKDTEMFSNIWTEYIGDYTEFCKQYEKDMQQYGENKGMMAKPNP 131
>sp|P15825|RLA0_HALMA 50S ribosomal protein L10E OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rplP0 PE=1
SV=2
Length = 348
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 11 TYHAEYHLKIYAPQLVTAARTLADHPSSKIAKENLEVFADMWQALVSDITTLCKEIMDKE 70
+ +A+Y AP ++ +AR A + + A E+ EV D+ + + L +I D+E
Sbjct: 230 SVNADYPTATTAPTMLQSARGNAKSLALQAAIEDPEVVPDLVSKADAQVRALASQIDDEE 289
Query: 71 RIPDK 75
+P++
Sbjct: 290 ALPEE 294
>sp|Q7V9U4|CAPP_PROMA Phosphoenolpyruvate carboxylase OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=ppc PE=3 SV=1
Length = 1001
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 23 PQLVTAARTLADHPSSKIAKENLEVFADMWQALV 56
P +++ LADH S ++ ++ LE+ D+W+ +V
Sbjct: 17 PDRKESSQILADHMSGRLLQKRLELVEDLWETVV 50
>sp|Q9V6K3|ROR2_DROME Tyrosine-protein kinase transmembrane receptor Ror2 OS=Drosophila
melanogaster GN=Nrk PE=1 SV=2
Length = 724
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 43 ENLEVFADMWQALVSDITTLCKEIMDK 69
+N +V +W L+SD+T LC+E +K
Sbjct: 98 KNEQVTTALWDELISDLTGLCREAAEK 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,349,002
Number of Sequences: 539616
Number of extensions: 946424
Number of successful extensions: 2550
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2519
Number of HSP's gapped (non-prelim): 37
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)