BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy10589
         (66 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q05B18|SHQ1_XENTR Protein SHQ1 homolog OS=Xenopus tropicalis GN=shq1 PE=2 SV=1
          Length = 604

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 35/48 (72%)

Query: 19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
          M+TP F++ Q  + +TIIIK PYA  ++ ++Y+E  DF+F + PY+LR
Sbjct: 1  MITPAFDISQDSDFLTIIIKVPYARASEIDIYIEGDDFKFYAKPYFLR 48


>sp|Q6PI26|SHQ1_HUMAN Protein SHQ1 homolog OS=Homo sapiens GN=SHQ1 PE=1 SV=2
          Length = 577

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 35/48 (72%)

Query: 19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
          MLTP F+L Q  + +TI I+ PYA +++ +VY E +DF+F + PY+LR
Sbjct: 1  MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLR 48


>sp|Q3MHH1|SHQ1_BOVIN Protein SHQ1 homolog OS=Bos taurus GN=SHQ1 PE=2 SV=1
          Length = 579

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 34/48 (70%)

Query: 19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
          MLTP F+L Q  + +T+ I+ PYA +++ +VY E  DF+F + PY+LR
Sbjct: 1  MLTPAFDLSQDPDFLTVAIRVPYARVSEFDVYFEGVDFKFYAKPYFLR 48


>sp|Q7TMX5|SHQ1_MOUSE Protein SHQ1 homolog OS=Mus musculus GN=Shq1 PE=2 SV=2
          Length = 569

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 33/48 (68%)

Query: 19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
          MLTP FEL Q  + +T+ I+ P+A  ++ +VY E  DF+F + PY+LR
Sbjct: 1  MLTPAFELTQDCDFLTVAIRVPHARASEFDVYFEGVDFKFYAKPYFLR 48


>sp|A1L1R0|SHQ1_DANRE Protein SHQ1 homolog OS=Danio rerio GN=shq1 PE=1 SV=1
          Length = 585

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 34/48 (70%)

Query: 19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
          M+TP FEL Q  + + ++I+ PY   +D ++Y+++ +F+F + PY+LR
Sbjct: 1  MITPAFELSQDADFLIVVIRVPYTRTSDFDIYIQEEEFKFYAKPYFLR 48


>sp|Q9TYM6|SHQ1_CAEEL Protein SHQ1 homolog OS=Caenorhabditis elegans GN=Y48A5A.1 PE=3
          SV=4
          Length = 431

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 31/48 (64%)

Query: 19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
          MLTP+F + Q ++ + I I+AP+ NIA+ +    D  F F+  PY+LR
Sbjct: 1  MLTPVFWITQDDDALLIRIRAPHGNIAELDYDHGDYMFVFTCPPYFLR 48


>sp|O43076|SHQ1_SCHPO Protein shq1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
          24843) GN=shq1 PE=3 SV=1
          Length = 451

 Score = 37.0 bits (84), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
          M+TP FEL Q EE V + +  PY    + E+   + +  F  +PY+L+
Sbjct: 1  MITPKFELRQDEEFVYLDVHTPYIKAKNVEIDAFNNEVNFCIAPYFLK 48


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.135    0.374 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,920,931
Number of Sequences: 539616
Number of extensions: 633809
Number of successful extensions: 1696
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1685
Number of HSP's gapped (non-prelim): 11
length of query: 66
length of database: 191,569,459
effective HSP length: 38
effective length of query: 28
effective length of database: 171,064,051
effective search space: 4789793428
effective search space used: 4789793428
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)