BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>psy10589
MLPPMFELVQSEEDQAVIMLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSS
SPYYLR
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with shq1 shq1 shq1 Protein SHQ1 homolog	protein from Xenopus (Silurana) tropicalis	4.6e-08
BLAST match view associations BLAST with SHQ1 SHQ1 SHQ1 Protein SHQ1 homolog	protein from Homo sapiens	9.1e-08
BLAST match view associations BLAST with Shq1 Shq1 Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor	gene from Rattus norvegicus	1.1e-07
BLAST match view associations BLAST with SHQ1 SHQ1 SHQ1 Protein SHQ1 homolog	protein from Bos taurus	1.5e-07
BLAST match view associations BLAST with SHQ1 SHQ1 SHQ1 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-07
BLAST match view associations BLAST with SHQ1 SHQ1 SHQ1 Uncharacterized protein	protein from Sus scrofa	1.5e-07
BLAST match view associations BLAST with shq1 shq1 shq1 SHQ1 homolog (S. cerevisiae)	gene_product from Danio rerio	8.6e-07
BLAST match view associations BLAST with Shq1 Shq1 Shq1 SHQ1 homolog (S. cerevisiae)	protein from Mus musculus	1.1e-06
BLAST match view associations BLAST with Y48A5A.1 Y48A5A.1 Y48A5A.1 Protein SHQ1 homolog	protein from Caenorhabditis elegans	0.00045
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy10589
        (66 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q05B18 - symbol:shq1 "Protein SHQ1 homolog" spe...   135  4.6e-08   1
UNIPROTKB|Q6PI26 - symbol:SHQ1 "Protein SHQ1 homolog" spe...   132  9.1e-08   1
RGD|1310610 - symbol:Shq1 "SHQ1, H/ACA ribonucleoprotein ...   126  1.1e-07   1
UNIPROTKB|Q3MHH1 - symbol:SHQ1 "Protein SHQ1 homolog" spe...   130  1.5e-07   1
UNIPROTKB|E2QW11 - symbol:SHQ1 "Uncharacterized protein" ...   130  1.5e-07   1
UNIPROTKB|F1SFN0 - symbol:SHQ1 "Uncharacterized protein" ...   130  1.5e-07   1
UNIPROTKB|E1C0W2 - symbol:SHQ1 "Uncharacterized protein" ...   127  3.1e-07   1
ZFIN|ZDB-GENE-070112-1412 - symbol:shq1 "SHQ1 homolog (S....   123  8.6e-07   1
MGI|MGI:1919421 - symbol:Shq1 "SHQ1 homolog (S. cerevisia...   122  1.1e-06   1
UNIPROTKB|Q9TYM6 - symbol:Y48A5A.1 "Protein SHQ1 homolog"...    96  0.00045   1


>UNIPROTKB|Q05B18 [details] [associations]
            symbol:shq1 "Protein SHQ1 homolog" species:8364 "Xenopus
            (Silurana) tropicalis" [GO:0022618 "ribonucleoprotein complex
            assembly" evidence=ISS] GO:GO:0005829 GO:GO:0005654
            InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
            PROSITE:PS51203 KO:K14764 CTD:55164 GO:GO:0022618
            InterPro:IPR007009 Pfam:PF04925 EMBL:BC123006 RefSeq:NP_001072616.1
            UniGene:Str.24608 GeneID:780072 KEGG:xtr:780072
            Xenbase:XB-GENE-5820245 HOVERGEN:HBG101384 Uniprot:Q05B18
        Length = 604

 Score = 135 (52.6 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 22/48 (45%), Positives = 35/48 (72%)

Query:    19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
             M+TP F++ Q  + +TIIIK PYA  ++ ++Y+E  DF+F + PY+LR
Sbjct:     1 MITPAFDISQDSDFLTIIIKVPYARASEIDIYIEGDDFKFYAKPYFLR 48


>UNIPROTKB|Q6PI26 [details] [associations]
            symbol:SHQ1 "Protein SHQ1 homolog" species:9606 "Homo
            sapiens" [GO:0005829 "cytosol" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0015030 "Cajal body" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005654
            "nucleoplasm" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0022618 "ribonucleoprotein complex assembly" evidence=IDA]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IDA] [GO:2000233 "negative regulation of rRNA processing"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] GO:GO:0005829
            GO:GO:0005737 GO:GO:0005654 GO:GO:0043065 InterPro:IPR008978
            SUPFAM:SSF49764 InterPro:IPR007052 PROSITE:PS51203 GO:GO:2000233
            KO:K14764 CTD:55164 eggNOG:NOG287505 HOGENOM:HOG000070000
            HOVERGEN:HBG062935 OMA:ESALNPQ OrthoDB:EOG4W9J4J GO:GO:0022618
            InterPro:IPR007009 Pfam:PF04925 EMBL:AK001401 EMBL:AK024656
            EMBL:BC017204 EMBL:BC017274 EMBL:BC025270 EMBL:BC032671
            EMBL:BC039830 EMBL:BC047879 EMBL:BX641074 IPI:IPI00465265
            RefSeq:NP_060600.2 UniGene:Hs.606584 ProteinModelPortal:Q6PI26
            SMR:Q6PI26 IntAct:Q6PI26 STRING:Q6PI26 PhosphoSite:Q6PI26
            DMDM:158563966 PRIDE:Q6PI26 Ensembl:ENST00000325599 GeneID:55164
            KEGG:hsa:55164 UCSC:uc003dpf.3 GeneCards:GC03M072883
            H-InvDB:HIX0003461 HGNC:HGNC:25543 HPA:HPA042792 MIM:613663
            neXtProt:NX_Q6PI26 PharmGKB:PA142670921 InParanoid:Q6PI26
            GenomeRNAi:55164 NextBio:58929 ArrayExpress:Q6PI26 Bgee:Q6PI26
            CleanEx:HS_SHQ1 Genevestigator:Q6PI26 Uniprot:Q6PI26
        Length = 577

 Score = 132 (51.5 bits), Expect = 9.1e-08, P = 9.1e-08
 Identities = 23/48 (47%), Positives = 35/48 (72%)

Query:    19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
             MLTP F+L Q  + +TI I+ PYA +++ +VY E +DF+F + PY+LR
Sbjct:     1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLR 48


>RGD|1310610 [details] [associations]
            symbol:Shq1 "SHQ1, H/ACA ribonucleoprotein assembly factor"
            species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0022618 "ribonucleoprotein complex
            assembly" evidence=ISO] [GO:0043065 "positive regulation of
            apoptotic process" evidence=ISO] [GO:2000233 "negative regulation
            of rRNA processing" evidence=ISO] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0015030 "Cajal body" evidence=ISO] RGD:1310610
            InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
            PROSITE:PS51203 InterPro:IPR007009 Pfam:PF04925 IPI:IPI00948197
            Ensembl:ENSRNOT00000007409 ArrayExpress:D4A282 Uniprot:D4A282
        Length = 284

 Score = 126 (49.4 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 22/48 (45%), Positives = 33/48 (68%)

Query:    19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
             MLTP FEL Q  + +T+ I+ P+A  ++ +VY E  DF+F + PY+LR
Sbjct:     1 MLTPAFELTQDRDFLTVAIRVPHARASEFDVYFEGVDFKFYAKPYFLR 48


>UNIPROTKB|Q3MHH1 [details] [associations]
            symbol:SHQ1 "Protein SHQ1 homolog" species:9913 "Bos
            taurus" [GO:0022618 "ribonucleoprotein complex assembly"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005654
            "nucleoplasm" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
            [GO:2000233 "negative regulation of rRNA processing" evidence=IEA]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IEA] GO:GO:0005829 GO:GO:0005737 GO:GO:0005654
            GO:GO:0043065 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
            PROSITE:PS51203 GO:GO:2000233 KO:K14764 EMBL:BC105240
            IPI:IPI00703662 RefSeq:NP_001030221.1 UniGene:Bt.62564
            STRING:Q3MHH1 PRIDE:Q3MHH1 Ensembl:ENSBTAT00000007154 GeneID:507486
            KEGG:bta:507486 CTD:55164 eggNOG:NOG287505
            GeneTree:ENSGT00390000007605 HOGENOM:HOG000070000
            HOVERGEN:HBG062935 InParanoid:Q3MHH1 OMA:ESALNPQ OrthoDB:EOG4W9J4J
            NextBio:20868086 ArrayExpress:Q3MHH1 GO:GO:0022618
            InterPro:IPR007009 Pfam:PF04925 Uniprot:Q3MHH1
        Length = 579

 Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 22/48 (45%), Positives = 34/48 (70%)

Query:    19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
             MLTP F+L Q  + +T+ I+ PYA +++ +VY E  DF+F + PY+LR
Sbjct:     1 MLTPAFDLSQDPDFLTVAIRVPYARVSEFDVYFEGVDFKFYAKPYFLR 48


>UNIPROTKB|E2QW11 [details] [associations]
            symbol:SHQ1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:2000233 "negative regulation of rRNA
            processing" evidence=IEA] [GO:0043065 "positive regulation of
            apoptotic process" evidence=IEA] [GO:0022618 "ribonucleoprotein
            complex assembly" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] GO:GO:0005737
            GO:GO:0005654 GO:GO:0043065 InterPro:IPR008978 SUPFAM:SSF49764
            InterPro:IPR007052 PROSITE:PS51203 GO:GO:2000233 KO:K14764
            CTD:55164 GeneTree:ENSGT00390000007605 OMA:ESALNPQ GO:GO:0022618
            InterPro:IPR007009 Pfam:PF04925 EMBL:AAEX03012117 EMBL:AAEX03012118
            RefSeq:XP_533763.2 Ensembl:ENSCAFT00000010390 GeneID:476557
            KEGG:cfa:476557 Uniprot:E2QW11
        Length = 579

 Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 23/48 (47%), Positives = 33/48 (68%)

Query:    19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
             MLTP F+L Q    +T+ I+ PYA +++ +VY E  DFRF + PY+LR
Sbjct:     1 MLTPAFDLSQDPAFLTVAIRVPYARVSEFDVYFEGVDFRFYAKPYFLR 48


>UNIPROTKB|F1SFN0 [details] [associations]
            symbol:SHQ1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000233 "negative regulation of rRNA processing"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0022618 "ribonucleoprotein complex
            assembly" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005654 "nucleoplasm" evidence=IEA] GO:GO:0005737 GO:GO:0005654
            GO:GO:0043065 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
            PROSITE:PS51203 GO:GO:2000233 KO:K14764 CTD:55164
            GeneTree:ENSGT00390000007605 OMA:ESALNPQ GO:GO:0022618
            InterPro:IPR007009 Pfam:PF04925 EMBL:CU861537 EMBL:AEMK01179662
            EMBL:CU469023 RefSeq:XP_003132372.3 Ensembl:ENSSSCT00000012605
            GeneID:100511045 KEGG:ssc:100511045 Uniprot:F1SFN0
        Length = 579

 Score = 130 (50.8 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 23/48 (47%), Positives = 34/48 (70%)

Query:    19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
             MLTP F+L Q  + +TI I+ PYA +++ +VY E  DF+F + PY+LR
Sbjct:     1 MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGLDFKFYAKPYFLR 48


>UNIPROTKB|E1C0W2 [details] [associations]
            symbol:SHQ1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0022618 "ribonucleoprotein complex
            assembly" evidence=IEA] [GO:0043065 "positive regulation of
            apoptotic process" evidence=IEA] [GO:2000233 "negative regulation
            of rRNA processing" evidence=IEA] GO:GO:0005737 GO:GO:0005654
            GO:GO:0043065 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
            PROSITE:PS51203 GO:GO:2000233 GeneTree:ENSGT00390000007605
            OMA:ESALNPQ GO:GO:0022618 InterPro:IPR007009 Pfam:PF04925
            EMBL:AADN02014446 EMBL:AADN02014447 EMBL:AADN02014448
            IPI:IPI00603278 Ensembl:ENSGALT00000012646 ArrayExpress:E1C0W2
            Uniprot:E1C0W2
        Length = 580

 Score = 127 (49.8 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 21/48 (43%), Positives = 35/48 (72%)

Query:    19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
             M+TP FEL Q  + +T+II+ PYA +++ +++ E  DF+F + PY+LR
Sbjct:     1 MITPDFELSQDPDFLTVIIRVPYARVSELDLFFEGEDFKFYAKPYFLR 48


>ZFIN|ZDB-GENE-070112-1412 [details] [associations]
            symbol:shq1 "SHQ1 homolog (S. cerevisiae)"
            species:7955 "Danio rerio" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0022618 "ribonucleoprotein complex assembly"
            evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005654 "nucleoplasm" evidence=IEA] ZFIN:ZDB-GENE-070112-1412
            InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
            PROSITE:PS51203 GeneTree:ENSGT00390000007605 OMA:ESALNPQ
            InterPro:IPR007009 Pfam:PF04925 EMBL:BX119974 EMBL:BX546459
            IPI:IPI00862539 Ensembl:ENSDART00000035513 Bgee:F1QC67
            Uniprot:F1QC67
        Length = 586

 Score = 123 (48.4 bits), Expect = 8.6e-07, P = 8.6e-07
 Identities = 18/48 (37%), Positives = 34/48 (70%)

Query:    19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
             M+TP FEL Q  + + ++I+ PY   +D ++Y+++ +F+F + PY+LR
Sbjct:     1 MITPAFELSQDADFLIVVIRVPYTRTSDFDIYIQEEEFKFYAKPYFLR 48


>MGI|MGI:1919421 [details] [associations]
            symbol:Shq1 "SHQ1 homolog (S. cerevisiae)" species:10090
            "Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005654 "nucleoplasm"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0022618
            "ribonucleoprotein complex assembly" evidence=ISO] [GO:0043065
            "positive regulation of apoptotic process" evidence=ISO]
            [GO:2000233 "negative regulation of rRNA processing" evidence=ISO]
            MGI:MGI:1919421 GO:GO:0005829 GO:GO:0005737 GO:GO:0005654
            GO:GO:0043065 InterPro:IPR008978 SUPFAM:SSF49764 InterPro:IPR007052
            PROSITE:PS51203 GO:GO:2000233 KO:K14764 CTD:55164 eggNOG:NOG287505
            GeneTree:ENSGT00390000007605 HOGENOM:HOG000070000
            HOVERGEN:HBG062935 OMA:ESALNPQ OrthoDB:EOG4W9J4J GO:GO:0022618
            InterPro:IPR007009 Pfam:PF04925 EMBL:AK012978 EMBL:BC052657
            IPI:IPI00330064 IPI:IPI00856808 RefSeq:NP_853621.2
            UniGene:Mm.256022 ProteinModelPortal:Q7TMX5 SMR:Q7TMX5
            STRING:Q7TMX5 PhosphoSite:Q7TMX5 PaxDb:Q7TMX5 PRIDE:Q7TMX5
            Ensembl:ENSMUST00000089245 Ensembl:ENSMUST00000113312
            Ensembl:ENSMUST00000170667 GeneID:72171 KEGG:mmu:72171
            UCSC:uc009dby.2 UCSC:uc009dbz.2 InParanoid:Q7TMX5 NextBio:335619
            Bgee:Q7TMX5 CleanEx:MM_SHQ1 Genevestigator:Q7TMX5 Uniprot:Q7TMX5
        Length = 569

 Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 22/48 (45%), Positives = 33/48 (68%)

Query:    19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
             MLTP FEL Q  + +T+ I+ P+A  ++ +VY E  DF+F + PY+LR
Sbjct:     1 MLTPAFELTQDCDFLTVAIRVPHARASEFDVYFEGVDFKFYAKPYFLR 48


>UNIPROTKB|Q9TYM6 [details] [associations]
            symbol:Y48A5A.1 "Protein SHQ1 homolog" species:6239
            "Caenorhabditis elegans" [GO:0022618 "ribonucleoprotein complex
            assembly" evidence=ISS] KO:K14764 eggNOG:NOG287505
            GeneTree:ENSGT00390000007605 OMA:ESALNPQ GO:GO:0022618
            InterPro:IPR007009 Pfam:PF04925 EMBL:FO081439 RefSeq:NP_500150.2
            ProteinModelPortal:Q9TYM6 SMR:Q9TYM6 STRING:Q9TYM6 PaxDb:Q9TYM6
            EnsemblMetazoa:Y48A5A.1.1 EnsemblMetazoa:Y48A5A.1.2 GeneID:176997
            KEGG:cel:CELE_Y48A5A.1 UCSC:Y48A5A.1 CTD:176997 WormBase:Y48A5A.1
            HOGENOM:HOG000199612 InParanoid:Q9TYM6 NextBio:894912
            Uniprot:Q9TYM6
        Length = 431

 Score = 96 (38.9 bits), Expect = 0.00045, P = 0.00045
 Identities = 20/48 (41%), Positives = 31/48 (64%)

Query:    19 MLTPMFELLQSEEDVTIIIKAPYANIADTEVYVEDTDFRFSSSPYYLR 66
             MLTP+F + Q ++ + I I+AP+ NIA+ +    D  F F+  PY+LR
Sbjct:     1 MLTPVFWITQDDDALLIRIRAPHGNIAELDYDHGDYMFVFTCPPYFLR 48


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       66        66   0.00091  102 3  11 22  0.41    28
                                                     29  0.48    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  358 (38 KB)
  Total size of DFA:  64 KB (2061 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.83u 0.07s 7.90t   Elapsed:  00:00:17
  Total cpu time:  7.84u 0.07s 7.91t   Elapsed:  00:00:18
  Start:  Thu Aug 15 14:16:34 2013   End:  Thu Aug 15 14:16:52 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
