BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1059
(512 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 272/559 (48%), Gaps = 76/559 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 70
+D I++G +AG V+A+RLSEV KVLLIEAGGD P+ ++IP M S+ D+ Y
Sbjct: 65 YDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYNT 124
Query: 71 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLK 130
EP + A L R GK LGG+S + ++Y RG DY+++A G GW Y + L
Sbjct: 125 EPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWSYQDVLP 184
Query: 131 YFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMND 190
+F KSED + ++ H G LPVG F N + + +E+G+ +D+N
Sbjct: 185 FFKKSEDNLELDAVGTE-YHAKGGLLPVGKFP--YNPPLSYALLKAGEEMGFSV-QDLNG 240
Query: 191 RYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIND--QNVATG 248
+ GF R G+R+S+A A+L P A R NL++L + VTKV+I+ +NV G
Sbjct: 241 QN-STGFMIAQMTARNGIRYSSARAFLRP-ARMRNNLHILLNTTVTKVLIHPGTKNV-VG 297
Query: 249 VEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI-PVKQDLRVGEN 307
VE + G ++ KEVI++ GA+ + Q+LLLSG+GPK L +V + PV VG+N
Sbjct: 298 VEVSDQFGSMRKILVKKEVIVSGGAVNSPQILLLSGVGPKEDLQKVNVRPVHHLPGVGKN 357
Query: 308 LKLN-AQFTGPVM--AFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGL----------WS- 353
L + A FT + A +APL +YL+ R G +S G+ W+
Sbjct: 358 LHNHVAYFTNFFIDDADTAPLNWAT-----AMEYLLFRDGLMSGTGISDVTAKMATRWAD 412
Query: 354 ----------FTGYI----------DTLQNTARPDLEIHLLYFQQNDIRNMYLA------ 387
F GY+ + L N +R I + N Y+
Sbjct: 413 RPNLPDLQLYFGGYLASCARTGQVGELLSNNSR---AIQIFPAVLNPKSRGYITLRSADP 469
Query: 388 ------------------TLIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTH 429
TL+ G + RL QT ++ G L ++ C + + S
Sbjct: 470 LDPPRIFANYLTDERDVKTLVEGIKFAIRLSQTSPLKQYGMRLDKTVVKGCESHAFASDA 529
Query: 430 SWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQS 489
W C +R T ++ G+ MG + DP AVV +L+V G++GLRV D S++P +
Sbjct: 530 YWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGVRGLRVMDTSIMPKVTAGNT 589
Query: 490 DAISYMIGEKCADLVKTSY 508
A + MI EK A L+K ++
Sbjct: 590 HAPAVMIAEKGAYLLKRAW 608
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 177/557 (31%), Positives = 270/557 (48%), Gaps = 72/557 (12%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 70
+D I++G +AG V+A+RLSEV KVLLIEAGGD P+ ++IP M S+ D+ Y
Sbjct: 65 YDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYNT 124
Query: 71 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLK 130
EP A L R GK LGG+S + ++Y RG DY+++A G GW Y++ L
Sbjct: 125 EPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLP 184
Query: 131 YFVKSEDYRSVIYNE-SKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
+F KSED ++ +E H G LPVG F N + + +ELG+ D+N
Sbjct: 185 FFKKSED--NLDLDEVGTEYHAKGGLLPVGKF--PYNPPLSYAILKAGEELGFSV-HDLN 239
Query: 190 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIND--QNVAT 247
+ GF R G+R+S+A A+L P A R NL++L + TK++I+ +NV
Sbjct: 240 GQN-STGFMIAQMTARNGIRYSSARAFLRP-ARMRNNLHILLNTTATKILIHPHTKNV-L 296
Query: 248 GVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGE 306
GVE + G T ++ KEV+L+AGA+ + +LLLSG+GPK L +V + +L VG+
Sbjct: 297 GVEVSDQFGSTRKILVKKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGK 356
Query: 307 NLKLNAQ-FTGPVM--AFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDT--L 361
NL + FT + A +APL +YL+ R G +S G+ T + T
Sbjct: 357 NLHNHVTYFTNFFIDDADTAPLNWAT-----AMEYLLFRDGLMSGTGISDVTAKLATRYA 411
Query: 362 QNTARPDLEIHLLYFQQNDIRNMYLATLI------------------------------- 390
+ RPDL+++ + + R + L+
Sbjct: 412 DSPERPDLQLYFGGYLASCARTGQVGELLSNNSRSIQIFPAVLNPRSRGFIGLRSADPLE 471
Query: 391 -------------------RGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSW 431
G ++ RL QT ++ G L ++ C + + S W
Sbjct: 472 PPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQYGMRLDKTVVKGCEAHAFGSDAYW 531
Query: 432 TCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDA 491
C +R T ++ G+ MG + DP AVV +L+V GI+GLRV D S++P + A
Sbjct: 532 ECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGIRGLRVMDTSIMPKVSSGNTHA 591
Query: 492 ISYMIGEKCADLVKTSY 508
+ MI EK A L+K ++
Sbjct: 592 PAVMIAEKGAYLLKRAW 608
>sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2
SV=2
Length = 594
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 170/558 (30%), Positives = 261/558 (46%), Gaps = 79/558 (14%)
Query: 6 KSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG------GDTPIHSRIPGMSSVL 59
+S D + ++VGA +AGCVLA RL+E + +VLL+EAG G + +I M + L
Sbjct: 36 ESRDEYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKI-HMPAAL 94
Query: 60 SLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLG 119
+ D Y G+ + G+ GGSS++ ++Y RG + DYE + + G
Sbjct: 95 VANLCDDRYNWCYHTEVQRGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQG 154
Query: 120 YNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQE 179
GW Y L YF K++ + + G G P+ + + K N+ + F + Q+
Sbjct: 155 ARGWDYAHCLPYFRKAQGHEL----GASRYRGADG--PLRVSRGKTNHPLHCAFLEATQQ 208
Query: 180 LGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVI 239
GYP +DMN + GF + G R+SAA AYL P A RTNL + V++V+
Sbjct: 209 AGYPLTEDMNG-FQQEGFGWMDMTIHEGKRWSAACAYLHP-ALSRTNLKAEAETLVSRVL 266
Query: 240 INDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVK 299
A GVEYV + G++ R A+KEVIL+ GAI + QLL+LSGIG L ++ IPV
Sbjct: 267 FEGTR-AVGVEYVKN-GQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVV 324
Query: 300 QDLR-VGENLK------LNAQFTGPVMAFSA--PLKRTVYSQEMVFKYLVNRIGPLSNAG 350
L VG+NL+ + T P+ SA PL++ E ++K+ G + A
Sbjct: 325 CHLPGVGQNLQDHLEIYIQQACTRPITLHSAQKPLRKVCIGLEWLWKF----TGEGATAH 380
Query: 351 LWSFTGYIDTLQNTARPDLEIHLLYFQ---------QNDIRNMYLATLIRGT-------- 393
L G+I + PD++ H L Q Q + +++ + RGT
Sbjct: 381 L-ETGGFIRSQPGVPHPDIQFHFLPSQVIDHGRVPTQQEAYQVHVGPM-RGTSVGWLKLR 438
Query: 394 ------------DYITRLEQTEAIRLAGGTLMSLNLEACSQ---YPWR-----------S 427
+Y++ E RL + L E +Q P+R S
Sbjct: 439 SANPQDHPVIQPNYLSTETDIEDFRLC----VKLTREIFAQEALAPFRGKELQPGSHIQS 494
Query: 428 THSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIIT 487
++R + +P T MG DP AVV P +V G++ LRV D S++P+ +
Sbjct: 495 DKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPSMVSG 554
Query: 488 QSDAISYMIGEKCADLVK 505
+A + MI EK AD++K
Sbjct: 555 NLNAPTIMIAEKAADIIK 572
>sp|A6U6Y8|BETA_SINMW Choline dehydrogenase OS=Sinorhizobium medicae (strain WSM419)
GN=betA PE=3 SV=1
Length = 549
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 260/547 (47%), Gaps = 79/547 (14%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT--PIHSRIPGMSSVLSLSEFDHAYL 69
D +I+G+ +AG LA RLSE + V+++E GG P ++ +S++ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGANSVVVLEFGGSDVGPFIQMPAALAWPMSMNRYNWGYL 63
Query: 70 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 129
+EP + N RI GK +GGSS++ ++Y RG S D++ + +LG GW Y + L
Sbjct: 64 SEPEP----NLNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFDRWEELGAKGWAYADVL 119
Query: 130 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
Y+ + E + + GT G P+ + + N + F + ++ G+ +D N
Sbjct: 120 PYYKRMEHS----HGGEEGWRGTDG--PLHVQRGPVKNPLFHAFIEAGKQAGFEVTEDYN 173
Query: 190 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 249
+ GF + T G R+SAA AYL P A KR N+ ++ R K++I + ATGV
Sbjct: 174 GSKQE-GFGLMEQTTWRGRRWSAASAYLRP-ALKRPNVELV-RCFARKIVI-ENGRATGV 229
Query: 250 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENL 308
E + G T V AN+EVI++A + + +LL+LSGIGP AHL E+ I VK D VG+NL
Sbjct: 230 E-IERGGRTEVVRANREVIVSASSFNSPKLLMLSGIGPAAHLQEMGIDVKADRPGVGQNL 288
Query: 309 KLNAQF------TGPVMAFSA-P--LKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYID 359
+ + +F T PV +S P + +Q + FK + +SN + ++
Sbjct: 289 QDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLFFKRGLG----ISNQ--FESCAFLR 342
Query: 360 TLQNTARPDLEIHLLY---------------FQQNDIRNMYLA---TLIRGTD------- 394
+ +PD++ H L FQ + N+ + +R +D
Sbjct: 343 SAPGVKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGDVTLRSSDPKADPVI 402
Query: 395 ---YITRLEQTEAIRLAGGTLMSLNLEACSQYPW--------------RSTHSWTCYIRH 437
Y++ E E R + L E Q + R+ ++R
Sbjct: 403 RFNYMSHPEDWEKFR----HCVRLTREIFGQKAFDLYRGPEIQPGEKVRTDEEIDAFLRE 458
Query: 438 LTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIG 497
+ +P GT MG DDP AVV P+ +V G+ GLRVAD S+ P+ +A S M G
Sbjct: 459 HLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLRVADSSIFPHITYGNLNAPSIMTG 518
Query: 498 EKCADLV 504
EK AD +
Sbjct: 519 EKAADHI 525
>sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1
Length = 531
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 170/550 (30%), Positives = 257/550 (46%), Gaps = 81/550 (14%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG-DTPIHSRIPGMSSVLSLSEFDHAYL 69
FD I+VG +AGCVLA RLSE S++V LIEAG DT +P + ++ L
Sbjct: 5 FDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHTWDLL 64
Query: 70 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 129
EP + A N +I G+ LGG S++ ++ RG D++ +A G +GW + +
Sbjct: 65 TEPQKHA----NNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWSFRDVQ 120
Query: 130 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
KYF++SE + ++ S HGT G P+G+ E N F S QE+G P D N
Sbjct: 121 KYFIRSEG--NAVF--SGTWHGTNG--PLGVSNLAEPNPTSRAFVQSCQEMGLPYNPDFN 174
Query: 190 DRYVD-VGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATG 248
+ G ++ R R S A YL P G R NL V+ R+ V K++ N ATG
Sbjct: 175 GASQEGAGIYQM--TIRNNRRCSTAVGYLRPALG-RKNLTVVTRALVLKIVFNGTR-ATG 230
Query: 249 VEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGEN 307
V+Y+ + G A++E+++TAGAI +L++LSG+GP AHL E IPV QDL VGEN
Sbjct: 231 VQYI-ANGTLNTAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIPVVQDLPGVGEN 289
Query: 308 LKLNAQFTGPVMA-------FSAPLKRTVYSQEMVFKYLVNRIGPLSN-----AGLWSFT 355
L+ F ++A F ++ + +Y + R GP+++ W
Sbjct: 290 LQ--DHFGVDIVAELKTDESFDK-YRKLHWMLWAGLEYTMFRSGPVASNVVEGGAFW--- 343
Query: 356 GYIDTLQNTARPDLEIHLLYFQQNDIRNMYL---ATLIRGTDYITRLEQTEAIRL----- 407
Y D ++ PDL+ H L + + A+ I Y+ R + +RL
Sbjct: 344 -YSDP--SSGVPDLQFHFLAEAGAEAGVTSVPKGASGITLNSYVLRPKSRGTVRLRSADP 400
Query: 408 ------------------AGGTLMSLNLEACSQYPWRSTHSWTC--------------YI 435
+ L+ E SQ TC Y
Sbjct: 401 RVNPMVDPNFLGDPADLETSAEGVRLSYEMFSQPSLEKHIRKTCFFSGKQPTMQMYRDYA 460
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R T+ +P T MG D +VV P LKV G++G+R+ D SV+P+ + + ++A + M
Sbjct: 461 REHGRTSYHPTCTCKMGRDD--MSVVDPRLKVHGLEGIRICDSSVMPSLLGSNTNAATIM 518
Query: 496 IGEKCADLVK 505
I E+ AD ++
Sbjct: 519 ISERAADFIQ 528
>sp|C3MIE4|BETA_RHISN Choline dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betA PE=3
SV=1
Length = 549
Score = 192 bits (487), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 259/543 (47%), Gaps = 71/543 (13%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT--PIHSRIPGMSSVLSLSEFDHAYL 69
D II+G+ +AG LA+RLSE S V+++E GG P ++ +S++ ++ YL
Sbjct: 4 DYIIIGSGSAGSALAHRLSEDSRNSVIVLEFGGTDIGPFIQMPAALAWPMSMNRYNWGYL 63
Query: 70 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 129
+EP + N RI GK +GGSS++ ++Y RG + D++ + +LG GW Y + L
Sbjct: 64 SEPEPH----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFDRWEQLGAKGWAYADVL 119
Query: 130 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
YF + E + GT G P+ + + N + F + ++ G+ D N
Sbjct: 120 PYFKRMEHS----HGGEDGWRGTDG--PLHVQRGPVKNPLFHAFVEAGKQAGFEMTDDYN 173
Query: 190 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 249
+ GF + T G R+SAA AYL P A KR N+ ++ R K++I + ATGV
Sbjct: 174 GSKQE-GFGLMEQTTWRGRRWSAASAYLKP-ALKRPNVQLI-RCFARKIVI-ENGRATGV 229
Query: 250 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENL 308
E + G V AN+EVI++A + + +LL+LSGIGP AHL ++ I VK D VG+NL
Sbjct: 230 E-IERGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDLGIDVKVDRPGVGQNL 288
Query: 309 KLNAQF------TGPVMAFSA-P--LKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYID 359
+ + +F T PV +S P + +Q + FK + +SN + ++
Sbjct: 289 QDHMEFYFQQISTKPVSLYSWLPWFWQGVAGAQWLFFKSGLG----ISNQ--FEACAFLR 342
Query: 360 TLQNTARPDLEIHLLY---------------FQQN---DIRNMYLATLIRGTD------- 394
+ +PD++ H L FQ + ++ + +R +D
Sbjct: 343 SAPGVKQPDIQYHFLPVAIRYDGKAAANTHGFQVHVGYNLSKSRGSVTLRASDPKADPVI 402
Query: 395 ---YITRLEQTEAIR-LAGGTLMSLNLEACSQYPW---------RSTHSWTCYIRHLTTT 441
Y++ E E R T +A QY ++ ++R +
Sbjct: 403 RFNYMSHPEDWEKFRHCVRLTREIFGQKAFDQYRGPEIQPGERVQTDEEIDAFLREHLES 462
Query: 442 TSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCA 501
+P GT MG+ DDP AVV P+ +V G+ GLRVAD S+ P+ +A S M GEK A
Sbjct: 463 AYHPCGTCKMGSKDDPMAVVDPETRVIGVDGLRVADSSIFPHVTYGNLNAPSIMTGEKAA 522
Query: 502 DLV 504
D +
Sbjct: 523 DHI 525
>sp|B9JBA2|BETA_AGRRK Choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=betA PE=3 SV=1
Length = 549
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 161/547 (29%), Positives = 255/547 (46%), Gaps = 79/547 (14%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT--PIHSRIPGMSSVLSLSEFDHAYL 69
D +I+G+ +AG +A+RLSE V+++E GG P ++ +S+ ++ YL
Sbjct: 4 DFVIIGSGSAGSAMASRLSEDGKHTVIVLEFGGSDVGPFIQMPAALAWPMSMDRYNWGYL 63
Query: 70 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 129
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG GW Y + L
Sbjct: 64 SEPEP----QLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAQGWAYADVL 119
Query: 130 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
YF + E + + GT G P+ + + N + F + ++ G+ +D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVRRGDARNPLFHAFIEAGKQAGFEATEDYN 173
Query: 190 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 249
+ GF + T G R+SAA AYL P A KR N+ ++ R KV+I + ATGV
Sbjct: 174 GGKQE-GFGLMEQTTWMGRRWSAATAYLKP-ALKRPNVELI-RCFARKVVI-ENGRATGV 229
Query: 250 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENL 308
E + G+ V AN EVI++A + + +LL+LSGIGP HL E+ I VK D VG NL
Sbjct: 230 E-IERGGKIEIVKANSEVIVSASSFNSPKLLMLSGIGPGQHLQEMGIEVKIDRPGVGANL 288
Query: 309 KLNAQF------TGPVMAFSA-P--LKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYID 359
+ + +F PV +S P ++ V +Q M FK L + + ++
Sbjct: 289 QDHMEFYFQQTSLKPVSLYSWLPWYMQGIVGAQWMFFK------SGLGTSNQFEACAFLR 342
Query: 360 TLQNTARPDLEIHLLY---------------FQQN---DIRNMYLATLIRGTD------- 394
+ +PD++ H L FQ + ++ A +R +D
Sbjct: 343 SAPGVKQPDIQYHFLPVAISYDGKAAAKSHGFQAHVGYNLSKSRGAVTLRSSDPKADPVI 402
Query: 395 ---YITRLEQTEAIRLAGGTLMSLNLEACSQYPW--------------RSTHSWTCYIRH 437
Y++ E E R + L E Q + ++ ++R
Sbjct: 403 RFNYMSHPEDWEKFR----HCVRLTREIFGQKAFDDYRGPEIQPGPDVQTDDQIDAFLRE 458
Query: 438 LTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIG 497
+ +P GT MG+ DDP AVV PD +V G++GLRVAD S+ P+ + S M G
Sbjct: 459 HLESAYHPCGTCKMGSKDDPMAVVDPDTRVIGVEGLRVADSSIFPSLTYGNLNGPSIMTG 518
Query: 498 EKCADLV 504
EK AD +
Sbjct: 519 EKAADHI 525
>sp|Q2KB43|BETA_RHIEC Choline dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=betA PE=3 SV=1
Length = 549
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/544 (29%), Positives = 252/544 (46%), Gaps = 73/544 (13%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT--PIHSRIPGMSSVLSLSEFDHAYL 69
D +I+G+ +AG LA RLSE VL+IEAGG P ++ +S+ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 70 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 129
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG +GW Y + L
Sbjct: 64 SEPEP----NLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVL 119
Query: 130 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
YF + E + + GT G P+ + + N + F + ++ G+ +D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVQRGGFTNPLFRAFIEAGKQAGFETTEDYN 173
Query: 190 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 249
+ GF + G R+SAA+AYL P A KR N+ ++ + + I+ + ATGV
Sbjct: 174 GSKQE-GFGLMEQTIFAGRRWSAANAYLKP-ALKRDNVGIV--YGLARRIVIENGRATGV 229
Query: 250 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENL 308
E + G T V AN+EVI++A + + +LL+LSGIGP HL E+ I VK D VG NL
Sbjct: 230 E-IERGGRTEVVKANREVIVSASSFNSPKLLMLSGIGPAKHLKEMGIEVKADRPGVGANL 288
Query: 309 KLNAQF------TGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQ 362
+ + +F T PV +S + ++L+++ G L + + ++ +
Sbjct: 289 QDHMEFYFQQVSTKPVSLYS--WLPWFWQGVAGAQWLLSK-GGLGASNQFEACAFLRSAP 345
Query: 363 NTARPDLEIHLLY---------------FQQN---DIRNMYLATLIRGTD---------- 394
+PD++ H L FQ + ++ + +R D
Sbjct: 346 GLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKADPVLRFN 405
Query: 395 YITRLEQTEAIRLAGGTLMSLNLEACSQYPW--------------RSTHSWTCYIRHLTT 440
Y++ E E R + L E Q + +S ++R
Sbjct: 406 YMSHPEDWEKFR----HCVRLTREIFGQKAFDAYRGPEIQPGEGVQSDEQIDSFLREHLE 461
Query: 441 TTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKC 500
+ +P GT MG DDP AVV P +V G+ GLRVAD S+ P+ + S M GEK
Sbjct: 462 SAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIFPHVTYGNLNGPSIMTGEKA 521
Query: 501 ADLV 504
AD +
Sbjct: 522 ADHI 525
>sp|P54223|BETA_RHIME Choline dehydrogenase OS=Rhizobium meliloti (strain 1021) GN=betA
PE=3 SV=2
Length = 549
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 257/547 (46%), Gaps = 79/547 (14%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT--PIHSRIPGMSSVLSLSEFDHAYL 69
D +I+G+ +AG LA RLSE V+++E GG P ++ +S++ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNWGYL 63
Query: 70 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 129
+EP + N RI GK +GGSS++ ++Y RG S D+ + +LG GW Y + L
Sbjct: 64 SEPEP----NLNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFNRWEELGAQGWAYADVL 119
Query: 130 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
Y+ + E + + GT G P+ + + N + F + +E G+ +D N
Sbjct: 120 PYYKRMEHS----HGGEEGWRGTDG--PLHVQRGPVKNPLFHAFIEAGKEAGFEVTEDYN 173
Query: 190 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 249
+ GF + T G R+SAA AYL P A KR N+ ++ R K++I + ATGV
Sbjct: 174 GSKQE-GFGLMEQTTWRGRRWSAASAYLRP-ALKRPNVELI-RCFARKIVI-ENGRATGV 229
Query: 250 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENL 308
E + G V AN+EVI++A + + +LL+LSGIGP AHL E+ I VK D VG+NL
Sbjct: 230 E-IERGGRIEVVKANREVIVSASSFNSPKLLMLSGIGPAAHLKEMGIDVKVDRPGVGQNL 288
Query: 309 KLNAQF------TGPVMAFSA-P--LKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYID 359
+ + +F T PV +S P + +Q + FK + +SN + ++
Sbjct: 289 QDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLFFKRGLG----ISNQ--FESCAFLR 342
Query: 360 TLQNTARPDLEIHLLY---------------FQQNDIRNMYLA---TLIRGTD------- 394
+ +PD++ H L FQ + N+ + +R +D
Sbjct: 343 SAPGVKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGNVSLRSSDPKADPVI 402
Query: 395 ---YITRLEQTEAIRLAGGTLMSLNLEACSQYPW--------------RSTHSWTCYIRH 437
Y++ E E R + L E Q + ++ ++R
Sbjct: 403 RFNYMSHPEDWEKFR----HCVRLTREIFGQKAFDLYRGPEIQPGEKVQTDEEIDGFLRE 458
Query: 438 LTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIG 497
+ +P GT MG DDP AVV P+ +V G+ GLRVAD S+ P+ +A S M G
Sbjct: 459 HLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLRVADSSIFPHITYGNLNAPSIMTG 518
Query: 498 EKCADLV 504
EK AD +
Sbjct: 519 EKSADHI 525
>sp|Q1MJU4|BETA_RHIL3 Choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain
3841) GN=betA PE=3 SV=1
Length = 549
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/544 (29%), Positives = 252/544 (46%), Gaps = 73/544 (13%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT--PIHSRIPGMSSVLSLSEFDHAYL 69
D +I+G+ +AG LA RLSE V++IEAGG P ++ +S+ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 70 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 129
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG +GW Y + L
Sbjct: 64 SEPE----ANLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVL 119
Query: 130 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
YF + E + + GT G P+ + + N + + F + ++ G+ +D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYN 173
Query: 190 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 249
+ GF + G R+SAA+AYL P A KR N+ ++ +++I D ATGV
Sbjct: 174 GSKQE-GFGLMEQTIFGGRRWSAANAYLKP-ALKRDNVKIVY-GLAQRIVIED-GRATGV 229
Query: 250 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENL 308
E + G V AN+EVI++A + + +LL+LSGIGP HL ++ I VK D VG NL
Sbjct: 230 E-IERNGRIEVVKANREVIVSASSFNSPKLLMLSGIGPGQHLQDMGIAVKADRPGVGANL 288
Query: 309 KLNAQF------TGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQ 362
+ + +F T PV +S + ++L++R G L + + ++ +
Sbjct: 289 QDHMEFYFQQVSTKPVSLYS--WLPWFWQGVAGAQWLLSR-GGLGASNQFEACAFLRSAP 345
Query: 363 NTARPDLEIHLLY---------------FQQN---DIRNMYLATLIRGTD---------- 394
+PD++ H L FQ + ++ + +R D
Sbjct: 346 GLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVSLRSADPKADPVLRFN 405
Query: 395 YITRLEQTEAIRLAGGTLMSLNLEACSQYPW--------------RSTHSWTCYIRHLTT 440
Y++ E E R + L E Q + +S ++R
Sbjct: 406 YMSHAEDWEKFR----HCVRLTREIFGQSAFHDYRGPEIQPGEGVQSDEEIDAFLREHLE 461
Query: 441 TTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKC 500
+ +P GT MG DDP AVV P +V GI GLRVAD S+ P+ + S M GEK
Sbjct: 462 SAYHPCGTCRMGAKDDPMAVVDPQTRVIGIDGLRVADSSIFPHVTYGNLNGPSIMTGEKA 521
Query: 501 ADLV 504
AD +
Sbjct: 522 ADHI 525
>sp|P64264|Y1310_MYCBO Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1310 PE=3
SV=1
Length = 528
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 259/551 (47%), Gaps = 84/551 (15%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG-DTPIHSRIPGMSSVLSLSEFDHAYLA 70
D ++VG +AG V+A+RLS + V+ +EAG D +P S L SE D YL
Sbjct: 6 DYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDYLT 65
Query: 71 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLK 130
EP + I GK LGGSS++ +++ RG + DY+ +A W Y + L
Sbjct: 66 EPQP----ELDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSYADVLG 121
Query: 131 YFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMND 190
YF + E+ + + S G G P+ + + + + + +A+E G+ + +
Sbjct: 122 YFRRIENVTAAWHFVSGDDSGVTG--PLHISRQRSPRSVTAAWLAAARECGFAAARPNSP 179
Query: 191 RYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVE 250
R GF E R G RFS ADAYL P A +R NL VL + T+V+I D + A GVE
Sbjct: 180 R--PEGFCETVVTQRRGARFSTADAYLKP-AMRRKNLRVLTGATATRVVI-DGDRAVGVE 235
Query: 251 YVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI-PVKQDLRVGENLK 309
Y S G+T V A +EV+L AGA+ + QLL+LSGIG + HL E I V VG NL
Sbjct: 236 Y-QSDGQTRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVGCNL- 293
Query: 310 LNAQFTGPVMAFSAPLKRTVYSQE---MVFKYLVNRIGPL-SNAGLWSFTGYIDTLQNTA 365
L+ T V+ F K ++++ E + YL+ R G L SN G G++ +
Sbjct: 294 LDHLVT--VLGFDVE-KDSLFAAEKPGQLISYLLRRRGMLTSNVG--EAYGFVRSRPELK 348
Query: 366 RPDLEI-----------------HLLYFQQ-----------------------------N 379
PDLE+ H + F +
Sbjct: 349 LPDLELIFAPAPFYDEALVPPAGHGVVFGPILVAPQSRGQITLRSADPHAKPVIEPRYLS 408
Query: 380 DIRNMYLATLIRGTDYITRLEQTEAIRLAGGTLM----SLNLEACSQYPWRSTHSWTCYI 435
D+ + A ++ G R+ Q +R G++ S L+ + +T S T Y
Sbjct: 409 DLGGVDRAAMMAGLRICARIAQARPLRDLLGSIARPRNSTELDEATLELALATCSHTLY- 467
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
+P+GT MG+ D +VV P L+V+G+ GLRVAD SV+P+ + + A S +
Sbjct: 468 --------HPMGTCRMGS--DEASVVDPQLRVRGVDGLRVADASVMPSTVRGHTHAPSVL 517
Query: 496 IGEKCADLVKT 506
IGEK ADL+++
Sbjct: 518 IGEKAADLIRS 528
>sp|P64263|Y1279_MYCTU Uncharacterized GMC-type oxidoreductase Rv1279/MT1316
OS=Mycobacterium tuberculosis GN=Rv1279 PE=3 SV=1
Length = 528
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 259/551 (47%), Gaps = 84/551 (15%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG-DTPIHSRIPGMSSVLSLSEFDHAYLA 70
D ++VG +AG V+A+RLS + V+ +EAG D +P S L SE D YL
Sbjct: 6 DYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDWDYLT 65
Query: 71 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLK 130
EP + I GK LGGSS++ +++ RG + DY+ +A W Y + L
Sbjct: 66 EPQP----ELDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSYADVLG 121
Query: 131 YFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMND 190
YF + E+ + + S G G P+ + + + + + +A+E G+ + +
Sbjct: 122 YFRRIENVTAAWHFVSGDDSGVTG--PLHISRQRSPRSVTAAWLAAARECGFAAARPNSP 179
Query: 191 RYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVE 250
R GF E R G RFS ADAYL P A +R NL VL + T+V+I D + A GVE
Sbjct: 180 R--PEGFCETVVTQRRGARFSTADAYLKP-AMRRKNLRVLTGATATRVVI-DGDRAVGVE 235
Query: 251 YVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI-PVKQDLRVGENLK 309
Y S G+T V A +EV+L AGA+ + QLL+LSGIG + HL E I V VG NL
Sbjct: 236 Y-QSDGQTRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVGCNL- 293
Query: 310 LNAQFTGPVMAFSAPLKRTVYSQE---MVFKYLVNRIGPL-SNAGLWSFTGYIDTLQNTA 365
L+ T V+ F K ++++ E + YL+ R G L SN G G++ +
Sbjct: 294 LDHLVT--VLGFDVE-KDSLFAAEKPGQLISYLLRRRGMLTSNVG--EAYGFVRSRPELK 348
Query: 366 RPDLEI-----------------HLLYFQQ-----------------------------N 379
PDLE+ H + F +
Sbjct: 349 LPDLELIFAPAPFYDEALVPPAGHGVVFGPILVAPQSRGQITLRSADPHAKPVIEPRYLS 408
Query: 380 DIRNMYLATLIRGTDYITRLEQTEAIRLAGGTLM----SLNLEACSQYPWRSTHSWTCYI 435
D+ + A ++ G R+ Q +R G++ S L+ + +T S T Y
Sbjct: 409 DLGGVDRAAMMAGLRICARIAQARPLRDLLGSIARPRNSTELDEATLELALATCSHTLY- 467
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
+P+GT MG+ D +VV P L+V+G+ GLRVAD SV+P+ + + A S +
Sbjct: 468 --------HPMGTCRMGS--DEASVVDPQLRVRGVDGLRVADASVMPSTVRGHTHAPSVL 517
Query: 496 IGEKCADLVKT 506
IGEK ADL+++
Sbjct: 518 IGEKAADLIRS 528
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 159/551 (28%), Positives = 253/551 (45%), Gaps = 73/551 (13%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT--PIHSRIPGMSSVLSLSEFDHAYL 69
D +IVG+ +AG +A RLSE V++IEAGG P ++ +S+ ++ YL
Sbjct: 4 DYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 70 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 129
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG GW Y + L
Sbjct: 64 SEPEP----NLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVL 119
Query: 130 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
YF + E + + GT G P+ + + +N + F + + G+ D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYN 173
Query: 190 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 249
+ GF + G R+SAA+AYL P A KR N+ L KVII + A GV
Sbjct: 174 GSKQE-GFGLMEQTIHNGRRWSAANAYLKP-ALKRGNV-TLVNGFARKVII-ENGRAVGV 229
Query: 250 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENL 308
E + +G V AN+EVI++A + + +LL+LSGIGP AHL ++ I VK D VG NL
Sbjct: 230 E-IERRGRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANL 288
Query: 309 KLNAQF------TGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQ 362
+ + +F T PV +S + ++L+++ G L + + ++ +
Sbjct: 289 QDHMEFYFQQVSTKPVSLYS--WLPWFWQGVAGAQWLLSK-GGLGASNQFEACAFLRSAP 345
Query: 363 NTARPDLEIHLLY---------------FQQNDIRNMYLA---TLIRGTD---------- 394
+PD++ H L FQ + N+ + +R D
Sbjct: 346 GLKQPDIQYHFLPVAISYDGKAAAKSHGFQAHVGYNLSKSRGNVTLRSADPHDDPVIRFN 405
Query: 395 YITRLEQTEAIRLAGGTLMSLNLEACSQYPW--------------RSTHSWTCYIRHLTT 440
Y++ E E R + L E Q + + ++R
Sbjct: 406 YMSHPEDWEKFR----HCVRLTREIFGQKAFDDFRGPEIQPGENIETDEQIDAFLREHLE 461
Query: 441 TTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKC 500
+ +P GT MG+ +DP AVV P+ +V G++GLRVAD S+ P+ + S M GEK
Sbjct: 462 SAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVADSSIFPHVTYGNLNGPSIMTGEKA 521
Query: 501 ADLVKTSYNIP 511
AD + +P
Sbjct: 522 ADHILGKTPLP 532
>sp|B5ZUG2|BETA_RHILW Choline dehydrogenase OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=betA PE=3 SV=1
Length = 549
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 157/544 (28%), Positives = 251/544 (46%), Gaps = 73/544 (13%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT--PIHSRIPGMSSVLSLSEFDHAYL 69
D +I+G+ +AG LA RLSE VL+IEAGG P ++ +S+ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 70 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 129
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG GW Y + L
Sbjct: 64 SEPEP----NLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYADVL 119
Query: 130 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
YF + E + + GT G P+ + + N + F + ++ G+ +D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYN 173
Query: 190 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGV 249
+ GF + G R+SAA+AYL P A KR N+ ++ +++I D ATGV
Sbjct: 174 GSKQE-GFGLMEQTIFSGRRWSAANAYLKP-ALKRKNVEIIY-GFAQRIVIEDGR-ATGV 229
Query: 250 EYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENL 308
E + G+ V AN+EVI++A + + +LL+LSGIGP HL E+ I VK D VG NL
Sbjct: 230 E-IERGGKIEVVKANREVIVSASSFNSPKLLMLSGIGPGEHLKEMGIEVKADRPGVGANL 288
Query: 309 KLNAQF------TGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQ 362
+ + +F T PV +S + ++L+++ G L + + ++ +
Sbjct: 289 QDHMEFYFQQVSTKPVSLYS--WLPWFWQGVAGAQWLLSK-GGLGASNQFEACAFLRSAP 345
Query: 363 NTARPDLEIHLLY---------------FQQN---DIRNMYLATLIRGTD---------- 394
+PD++ H L FQ + ++ + +R D
Sbjct: 346 GLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKADPVLRFN 405
Query: 395 YITRLEQTEAIRLAGGTLMSLNLEACSQYPW--------------RSTHSWTCYIRHLTT 440
Y++ E E R + L E Q + +S ++R
Sbjct: 406 YMSHAEDWEKFR----HCVRLTRELFGQAAFDDYRGAEIQPGESVQSDEEIDAFLREHLE 461
Query: 441 TTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKC 500
+ +P GT MG DDP AVV P +V G++ LRVAD S+ P+ + S M GEK
Sbjct: 462 SAYHPCGTCKMGAKDDPMAVVDPQTRVIGVEALRVADSSIFPHVTYGNLNGPSIMTGEKA 521
Query: 501 ADLV 504
AD +
Sbjct: 522 ADHI 525
>sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh
PE=1 SV=1
Length = 599
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 162/554 (29%), Positives = 259/554 (46%), Gaps = 77/554 (13%)
Query: 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG------GDTPIHSRIPGMSSVLSLS 62
D + I+VGA +AGCVLANRL+E + +VLL+EAG G + +I M + L +
Sbjct: 44 DEYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKI-HMPAALVAN 102
Query: 63 EFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNG 122
D Y A G+ + G+ GGSS++ ++Y RG + DY + + G G
Sbjct: 103 LCDDKYNWYYHTEAQPGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEG 162
Query: 123 WGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGY 182
W Y L YF K++ + E A G P+ + + K N+ + + F +A++ GY
Sbjct: 163 WDYAHCLPYFRKAQKH------ELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGY 216
Query: 183 PCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIND 242
P +DMN + GF + G R+S A AYL P A R NL ++ V++V+ +
Sbjct: 217 PFTEDMNG-FQQEGFGWMDMTIHQGKRWSTASAYLRP-ALSRPNLRAEVQTLVSRVLF-E 273
Query: 243 QNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDL 302
A GVEY+ G++ + ++EVIL+ GAI + QLL+LSG+G L ++ IPV L
Sbjct: 274 GTRAVGVEYIKD-GQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHL 332
Query: 303 R-VGENLK------LNAQFTGPVMAFSA--PLKRTVYSQEMVFKYLVNRIGPLSNAGLWS 353
VG+NL+ + T P+ SA PL++ E ++++ G + A L
Sbjct: 333 PGVGQNLQDHLEIYIQHACTQPITLHSAQKPLRKVCIGLEWLWRF----TGDGATAHL-E 387
Query: 354 FTGYIDTLQNTARPDLEIHLLYFQ---------QNDIRNMYLATL---------IRGT-- 393
G+I + PD++ H L Q Q + +++ T+ +R T
Sbjct: 388 TGGFIRSRPGVPHPDIQFHFLPSQVIDHGRKPTQQEAYQVHVGTMRATSVGWLKLRSTNP 447
Query: 394 --------DYITRLEQTEAIRLAGGTLMSLNLEACSQ---YPWR-----------STHSW 431
+Y++ E R + L E +Q P+R S
Sbjct: 448 QDHPMINPNYLSTETDVEDFR----QCVKLTREIFAQEAFAPFRGKELQPGSHVQSDKEI 503
Query: 432 TCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDA 491
++R + +P T MG DP AVV +V G++ LRV D S++P+ + +A
Sbjct: 504 DAFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVIGVENLRVIDASIMPSVVSGNLNA 563
Query: 492 ISYMIGEKCADLVK 505
+ MI EK AD++K
Sbjct: 564 PTIMIAEKAADVIK 577
>sp|B5Z1R0|BETA_ECO5E Choline dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=betA PE=3 SV=1
Length = 562
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 260/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+AK G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDCK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ DL
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWT-C--------YI 435
+Y++ E +AIR+ T ++ A QY R T C ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGTECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKMADMIRGKEALP 538
>sp|Q8X6C6|BETA_ECO57 Choline dehydrogenase OS=Escherichia coli O157:H7 GN=betA PE=3 SV=1
Length = 562
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 260/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+AK G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDCK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ DL
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWT-C--------YI 435
+Y++ E +AIR+ T ++ A QY R T C ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGTECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKMADMIRGKEALP 538
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 163/570 (28%), Positives = 264/570 (46%), Gaps = 90/570 (15%)
Query: 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG------GDTPIHSRI---PGMSSVL 59
D + ++VGA +AGCVLA+RL+E + +VLL+EAG G + +I + S L
Sbjct: 41 DEYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNL 100
Query: 60 SLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLG 119
+++ Y EP G+ + + G+ GGSS++ ++Y RG + DY + + G
Sbjct: 101 CDDKYNWYYHTEPQP----GMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREG 156
Query: 120 YNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQE 179
GW Y L YF K++ + E A G P+ + + K N+ + + F +A++
Sbjct: 157 AEGWDYAHCLPYFRKAQRH------ELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQ 210
Query: 180 LGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVI 239
GYP +DMN + GF + G R+S A AYL P+ R NL ++ V++V+
Sbjct: 211 AGYPFTEDMNG-FQQEGFGWMDMTVHQGKRWSTACAYLHPVL-SRPNLRAEVQTLVSRVL 268
Query: 240 INDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVK 299
A GVEY+ G+ + ++EVIL+ GAI + QLL+LSG+G L ++ IPV
Sbjct: 269 FEGTR-AVGVEYIKD-GQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVV 326
Query: 300 QDLR-VGENLK------LNAQFTGPVMAFSA--PLKRTVYSQEMVFKYLVNRIGPLSNAG 350
L VG+NL+ + T P+ SA PL++ E ++ Y G + A
Sbjct: 327 CHLPGVGQNLQDHLEVYVQQACTQPITLHSAQKPLRKVCIGLEWLWSY----TGDGATAH 382
Query: 351 LWSFTGYIDTLQNTARPDLEIHLLYFQ---------QNDIRNMYLATLIRGT-------- 393
L G+I + PD++ H L Q Q + +++ T+ R T
Sbjct: 383 L-ETGGFIRSRPGVPHPDIQFHFLPSQVIDHGRKPTQQEAYQVHVGTM-RATSVGWLKLR 440
Query: 394 ------------DYITRLEQTEAIRLAGGTLMSLNLEACSQ---YPWR-----------S 427
+Y++ E R + L+ E +Q P+R S
Sbjct: 441 SANPRDHPVIHPNYLSTETDVEDFR----QCVRLSREIFAQEALAPFRGKELQPGSHVQS 496
Query: 428 THSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIIT 487
++R + +P T MG + DP AVV KV G++ LRV D S++P+ +
Sbjct: 497 DKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVENLRVVDASIMPSVVSG 556
Query: 488 QSDAISYMIGEKCADLVK-----TSYNIPI 512
+A + MI EK AD++K N+P+
Sbjct: 557 NLNAPTVMIAEKAADIIKGHPALEDKNVPV 586
>sp|B7N8L3|BETA_ECOLU Choline dehydrogenase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=betA PE=3 SV=1
Length = 556
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 260/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T +G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ DL
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGSAELLAEFDIPLVHDLP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTCYI 435
+Y++ E +AIR+ T ++ A QY R + ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGVECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D AVV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMAVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKMADMIRGKDALP 538
>sp|B3PTE0|BETA_RHIE6 Choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betA
PE=3 SV=1
Length = 549
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 160/547 (29%), Positives = 252/547 (46%), Gaps = 79/547 (14%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT--PIHSRIPGMSSVLSLSEFDHAYL 69
D +I+G+ +AG LA RLSE VL+IEAGG P ++ +S+ ++ YL
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 70 AEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL 129
+EP + N RI GK +GGSS++ ++Y RG + D+ + +LG +GW Y + L
Sbjct: 64 SEPEP----NLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVL 119
Query: 130 KYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMN 189
YF + E + + GT G P+ + + N + F + ++ G+ D N
Sbjct: 120 PYFKRMEHS----HGGEEGWRGTDG--PLHVQRGGFTNPLFRAFIEAGKQAGFETTDDYN 173
Query: 190 DRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTN---LYVLKRSKVTKVIINDQNVA 246
+ GF + G R+SAA+AYL P A KR N +Y L R K++I D A
Sbjct: 174 GSKQE-GFGLMEQTIFSGRRWSAANAYLKP-ALKRKNVGMVYGLAR----KIVIEDGR-A 226
Query: 247 TGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VG 305
TGVE + G+ V A +EVI++A + + +LL+LSGIGP HL+++ I VK D VG
Sbjct: 227 TGVE-IERGGKVEVVKATREVIVSASSFNSPKLLMLSGIGPGQHLNDMGIAVKADRPGVG 285
Query: 306 ENLKLNAQF------TGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTGYID 359
NL+ + +F T PV +S + ++L+++ G L + + ++
Sbjct: 286 ANLQDHMEFYFQQVSTKPVSLYS--WLPWFWQGVAGAQWLLSK-GGLGASNQFEACAFLR 342
Query: 360 TLQNTARPDLEIHLLY---------------FQQN---DIRNMYLATLIRGTD------- 394
+ +PD++ H L FQ + ++ + +R D
Sbjct: 343 SAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKAEPVL 402
Query: 395 ---YITRLEQTEAIRLAGGTLMSLNLEACSQYPW--------------RSTHSWTCYIRH 437
Y++ E E R + L E Q + +S ++R
Sbjct: 403 RFNYMSHPEDWEKFR----HCVRLTREIFGQTAFDAYRGPEIQPGEGVQSDEQIDAFLRE 458
Query: 438 LTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIG 497
+ +P GT MG DDP AVV P +V G+ GLRVAD S+ P+ + S M G
Sbjct: 459 HLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIFPHVTYGNLNGPSIMTG 518
Query: 498 EKCADLV 504
EK AD +
Sbjct: 519 EKAADHI 525
>sp|B6I074|BETA_ECOSE Choline dehydrogenase OS=Escherichia coli (strain SE11) GN=betA
PE=3 SV=1
Length = 556
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 260/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWT-C--------YI 435
+Y++ E +AIR+ T ++ A QY R T C ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGTECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKIADMIRGQEALP 538
>sp|A7ZWV4|BETA_ECOHS Choline dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betA
PE=3 SV=1
Length = 556
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 260/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWT-C--------YI 435
+Y++ E +AIR+ T ++ A QY R T C ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGTECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKIADMIRGQEALP 538
>sp|B7M2V5|BETA_ECO8A Choline dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betA
PE=3 SV=1
Length = 556
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 260/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWT-C--------YI 435
+Y++ E +AIR+ T ++ A QY R T C ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGTECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKIADMIRGQEALP 538
>sp|B7L439|BETA_ECO55 Choline dehydrogenase OS=Escherichia coli (strain 55989 / EAEC)
GN=betA PE=3 SV=1
Length = 556
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 260/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWT-C--------YI 435
+Y++ E +AIR+ T ++ A QY R T C ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGTECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKIADMIRGQEALP 538
>sp|A7ZI50|BETA_ECO24 Choline dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A
/ ETEC) GN=betA PE=3 SV=1
Length = 556
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 260/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWT-C--------YI 435
+Y++ E +AIR+ T ++ A QY R T C ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGTECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKIADMIRGQEALP 538
>sp|B1LIJ7|BETA_ECOSM Choline dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=betA PE=3 SV=1
Length = 562
Score = 181 bits (460), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 260/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIP-GMSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T +G R S A YL A R+NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTARGYLDQ-AKSRSNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R ANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAGLLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-IGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRAPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTCYI 435
+Y++ E +AIR+ T ++ A QY R + ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYHGREISPGVECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKMADMIRGKDALP 538
>sp|Q1IG70|BETA_PSEE4 Choline dehydrogenase OS=Pseudomonas entomophila (strain L48)
GN=betA PE=3 SV=1
Length = 565
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 262/554 (47%), Gaps = 71/554 (12%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD IIVGA +AG LA RL+E +S+ VLL+EAGG +++P ++ L ++
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDASVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P F + R++ GKGLGGSS + + Y RG + D++ +A+L G W Y
Sbjct: 65 AYETDPEPF----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTY 120
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R + N+ HG +G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGEGPVSVATPKAGNNPLFHAMVEAGVQ-AGYPRT 175
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
+D+N Y GF + +T+ G R S A YL A KR NL ++ + +V+ D
Sbjct: 176 EDLNG-YQQEGFGPMDRSVTKKGRRSSTARGYLDQ-AKKRPNLTIVTHALSDRVLF-DGK 232
Query: 245 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GV Y V E V A KEVI+++GAIA+ QLL SG+GP+A L+ + IPV DL
Sbjct: 233 RAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLP 292
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMV-FKYLVNRIGPLSNAGLWSFT 355
VGENL+ L T PV + + L ++Q + ++L N G + + +
Sbjct: 293 GVGENLQDHLELYLQYACTQPVSLYPSLL---WWNQPAIGAEWLFNGTG-IGASNQFEAG 348
Query: 356 GYIDTLQNTARPDLEIHLL-----YFQQNDIRNM-------YLATLIRGT---------- 393
G+I T P+++ H L Y N ++ + + RG
Sbjct: 349 GFIRTRPEFKWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQAKSKDPRQ 408
Query: 394 ------DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPW------RSTHSWTCYIRH 437
+Y++ E + IRL + L+A ++ +IR
Sbjct: 409 HPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDAFRGREISPGAHVQTDEELDKFIRE 468
Query: 438 LTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIG 497
T +P + MG D AVV + +V G++GLRV D S++P I +A + MI
Sbjct: 469 HAETAFHPSCSCKMGTDD--MAVVDGEGRVHGMQGLRVVDASIMPLIITGNLNATTIMIA 526
Query: 498 EKCADLVKTSYNIP 511
EK +D ++ +P
Sbjct: 527 EKISDKIRGRKPLP 540
>sp|B7UJG4|BETA_ECO27 Choline dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69
/ EPEC) GN=betA PE=3 SV=1
Length = 556
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 171/553 (30%), Positives = 257/553 (46%), Gaps = 69/553 (12%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIP-GMSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVITSKPGVNPLFEAMIEAGMQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T +G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R ANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + + ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPRIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITRLEQTEAIRLAGGTLMS-LNLEACSQYPWRS-THSWTC--------YIRHL 438
+Y++ + + R A T ++ A QY R + C ++R+
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRTTREIMHQPALDQYRGREISPGVECQTDEQLDEFVRNH 467
Query: 439 TTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGE 498
T +P GT MG D AVV + +V G++GLRV D S++P I +A + MIGE
Sbjct: 468 AETAFHPCGTCKMGY--DEMAVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGE 525
Query: 499 KCADLVKTSYNIP 511
K AD+++ +P
Sbjct: 526 KIADMIRGKEALP 538
>sp|P17444|BETA_ECOLI Choline dehydrogenase OS=Escherichia coli (strain K12) GN=betA PE=1
SV=1
Length = 556
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 259/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDMGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTCYI 435
+Y++ E +AIR+ T ++ A QY R + ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGVECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKIADMIRGQEALP 538
>sp|B1J0W6|BETA_ECOLC Choline dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=betA PE=3 SV=1
Length = 556
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 259/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDMGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTCYI 435
+Y++ E +AIR+ T ++ A QY R + ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGVECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKIADMIRGQEALP 538
>sp|B1XE52|BETA_ECODH Choline dehydrogenase OS=Escherichia coli (strain K12 / DH10B)
GN=betA PE=3 SV=1
Length = 556
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 259/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDMGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTCYI 435
+Y++ E +AIR+ T ++ A QY R + ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGVECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKIADMIRGQEALP 538
>sp|Q1RFM3|BETA_ECOUT Choline dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC)
GN=betA PE=3 SV=2
Length = 562
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 258/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIP-GMSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T +G R S A YL A R NL ++ +T I D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIFFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R ANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTCYI 435
+Y++ E +AIR+ T ++ A QY R + ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGVECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D AVV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMAVVDAEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKMADMIRGKDALP 538
>sp|B7MCD0|BETA_ECO45 Choline dehydrogenase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=betA PE=3 SV=1
Length = 562
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 258/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIP-GMSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T +G R S A YL A R NL ++ +T I D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIFFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R ANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTCYI 435
+Y++ E +AIR+ T ++ A QY R + ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGVECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D AVV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMAVVDAEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKMADMIRGKDALP 538
>sp|Q0T7N0|BETA_SHIF8 Choline dehydrogenase OS=Shigella flexneri serotype 5b (strain
8401) GN=betA PE=3 SV=1
Length = 556
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 257/550 (46%), Gaps = 75/550 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R TANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTCYI 435
+Y++ E +AIR+ T ++ A QY R + ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGVECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D +VV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVK 505
IGEK AD+++
Sbjct: 523 IGEKIADMIR 532
>sp|A5WA97|BETA_PSEP1 Choline dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=betA PE=3 SV=1
Length = 565
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 262/558 (46%), Gaps = 79/558 (14%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD IIVGA +AG LA RL+E + + VLL+EAGG +++P ++ L ++
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P + + R++ GKGLGGSS + + Y RG + D++ +A+L G W Y
Sbjct: 65 AYETDPEPY----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTY 120
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGDGPVSVATPKAGNNPLFHAMVEAGVQ-AGYPRT 175
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
+D+N Y GF + +T+ G R S A YL A KR NL ++ + +V+ D
Sbjct: 176 EDLNG-YQQEGFGPMDRSVTKNGRRSSTARGYLDQ-AKKRPNLTIVTHALTDRVLF-DGK 232
Query: 245 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GV Y V E V A KEVI+++GAIA+ QLL SG+GP+A L+ + IPV DL
Sbjct: 233 RAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLP 292
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMV-FKYLVNRIGPLSNAGLWSFT 355
VGENL+ L T PV + + L ++Q + ++L N G + + +
Sbjct: 293 GVGENLQDHLELYLQYACTQPVSLYPSLL---WWNQPAIGAEWLFNGTG-IGASNQFEAG 348
Query: 356 GYIDTLQNTARPDLEIHLL-----YFQQNDIRNM-------YLATLIRGT---------- 393
G+I T P+++ H L Y N ++ + + RG
Sbjct: 349 GFIRTRPEFKWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQAKSKDPRQ 408
Query: 394 ------DYITRLEQTEAIRLAGGTLMSLNLEACSQY---PWR------STHSWT-----C 433
+Y++ + + R + L E +Q P+R H T
Sbjct: 409 HPSILFNYMSTEQDWQEFRDG----IRLTREIMAQPALDPYRGREISPGAHVQTDEELDK 464
Query: 434 YIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAIS 493
+IR T +P + MG D AVV + +V G+KGLRV D S++P I +A +
Sbjct: 465 FIREHAETAFHPSCSCKMGTDD--MAVVDGEGRVHGMKGLRVVDASIMPLIITGNLNATT 522
Query: 494 YMIGEKCADLVKTSYNIP 511
MI EK +D ++ +P
Sbjct: 523 IMIAEKISDKIRGRKPLP 540
>sp|Q0TKW1|BETA_ECOL5 Choline dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=betA PE=3 SV=2
Length = 556
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 258/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIP-GMSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVITSKPGVNPLFEAMIEAGMQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T +G R S + YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTSRGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R ANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + + ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPRIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTCYI 435
+Y++ E +AIR+ T ++ A QY R + ++
Sbjct: 408 PGILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGVECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D AVV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMAVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKIADMIRGKEALP 538
>sp|Q8FKI9|BETA_ECOL6 Choline dehydrogenase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=betA PE=3 SV=2
Length = 556
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 258/556 (46%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIP-GMSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP F + N R++ GKGLGGSS + + Y RG + D +N+A+ W Y
Sbjct: 63 AYETEPEPF----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPSLENWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDVGEND---YHGGDGPVSVTTSKPGVNPLFEAMIEAGMQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T +G R S A YL A R NL ++ +T II D
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTARGYLDQ-AKSRPNL-TIRTHAMTDHIIFDGK 230
Query: 245 VATGVEYVNSKGE-TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GVE++ R ANKEV+L AGAIA+ Q+L SG+G L E IP+ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + + ++L G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPRIGAEWLFGGTG-VGASNHFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I + + A P+++ H L Y N ++ + RG
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWRS-THSWTC--------YI 435
+Y++ E +AIR+ T ++ A QY R + C ++
Sbjct: 408 PGILFNYMSHEQDWQEFRDAIRI---TREIMHQPALDQYRGREISPGVECQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG D AVV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAFHPCGTCKMGY--DEMAVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD+++ +P
Sbjct: 523 IGEKIADMIRGKEALP 538
>sp|A6T613|BETA_KLEP7 Choline dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=betA PE=3 SV=1
Length = 554
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 260/558 (46%), Gaps = 79/558 (14%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP + + N R++ GKGLGGSS + + Y RG + D +N+AK G W Y
Sbjct: 63 AYETEPEPY----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEHWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYYRKAET-RDIGPND---YHGGDGPVSVTTPKPGNNPLFEAMVEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL G R NL ++ +T II
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQARG-RPNL-TIRTHALTDHIIFAGK 230
Query: 245 VATGVEYVNSKGETV---RVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQD 301
A GVE++ +GE+ + TANKEV+L AGAIA+ Q+L SG+G L + IPV D
Sbjct: 231 RAVGVEWL--EGESTIPSKATANKEVLLCAGAIASPQILQRSGVGNPELLRQFDIPVVHD 288
Query: 302 LR-VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSF 354
L VGENL+ L + PV + P + ++ ++L G + + +
Sbjct: 289 LPGVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-IGASNQFEA 345
Query: 355 TGYIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT--------- 393
G+I + A P+++ H L Y N ++ + RG
Sbjct: 346 GGFIRSRAEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRLKSRDPH 405
Query: 394 -------DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTC 433
+Y++ E +AIR+ T +N A +Y R S
Sbjct: 406 AHPAILFNYMSHEQDWQEFRDAIRI---TREIMNQPALDKYRGREISPGIECQSDAELDE 462
Query: 434 YIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAIS 493
++R+ T +P GT MG D AVV + +V G++GLRV D S++P I +A +
Sbjct: 463 FVRNHAETAFHPCGTCKMGY--DEMAVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATT 520
Query: 494 YMIGEKCADLVKTSYNIP 511
MIGEK AD ++ +P
Sbjct: 521 IMIGEKMADAIRGRQPLP 538
>sp|A7MFA8|BETA_CROS8 Choline dehydrogenase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=betA PE=3 SV=1
Length = 559
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 168/556 (30%), Positives = 266/556 (47%), Gaps = 75/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIP-GMSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E S + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDSDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY EP + + N R++ GKGLGGSS + + Y RG + D +N+A+ G W Y
Sbjct: 63 AYETEPEPY----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAQQPGLERWTY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L Y+ KSE R + N+ HG G + + K N + + E Q GYP
Sbjct: 119 LDCLPYYRKSET-RDIGAND---YHGGDGPVSITTCKPGNNPLFAAMIEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELPG-MTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A +R NL ++ + +++ ++
Sbjct: 174 DDLNG-YQQEGFGPMDRFVTPKGRRSSTARGYLD-TAKQRPNLKIITHATTDRILFENKR 231
Query: 245 VATGVEYVNSKGETVR-VTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GV Y++ T + V A +EV+L AGAIA+ Q+L SG+G L + IPV DL
Sbjct: 232 -AVGVAYLHGASNTPQEVHARREVLLCAGAIASPQILQRSGVGNAELLKQFDIPVVHDLP 290
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L + PV + P + ++ ++L N G + + + G
Sbjct: 291 GVGENLQDHLEMYLQYECKEPVSLY--PALKWWNQPKIGAEWLFNGTG-IGASNHFEGGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIR----NMYLATL---------IRGTD---- 394
+I + + A P+++ H L Y N + ++ ++ I+ D
Sbjct: 348 FIRSREEFAWPNIQYHFLPVAINYNGSNAVEAHGFQCHVGSMRSPSRGHVRIKSRDPHQH 407
Query: 395 ------YITR----LEQTEAIRLAGGTLMSLNLEACSQYPWRS-THSWTC--------YI 435
Y++ E +AIR+ T +N A ++ R + C ++
Sbjct: 408 PAILFNYMSHEQDWQEFRDAIRI---TRQIINQPALDKFRGREISPGIDCQTDEQLDEFV 464
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R+ T +P GT MG+ D AVV + +V G++GLRV D S++P I +A + M
Sbjct: 465 RNHAETAYHPCGTCKMGS--DEMAVVDDEGRVHGLEGLRVVDASIMPLIITGNLNATTIM 522
Query: 496 IGEKCADLVKTSYNIP 511
IGEK AD ++ +P
Sbjct: 523 IGEKIADNIRGRTPLP 538
>sp|Q88CW6|BETA_PSEPK Choline dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=betA
PE=3 SV=1
Length = 565
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 262/558 (46%), Gaps = 79/558 (14%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD IIVGA +AG LA RL+E + + VLL+EAGG +++P ++ L ++
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P + + R++ GKGLGGSS + + Y RG + D++ +A+L G W Y
Sbjct: 65 AYETDPEPY----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTY 120
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R + N+ HG +G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGEGPVSVTTPKAGNNPLFHAMVEAGVQ-AGYPRT 175
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
+D+N Y GF + +T+ G R S A YL A KR NL ++ + +V+ D
Sbjct: 176 EDLNG-YQQEGFGPMDRTVTKNGRRSSTARGYLDQ-AKKRPNLTIVTHALTDRVLF-DGK 232
Query: 245 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GV Y V E V A KEVI+++GAIA+ QLL SG+GP+A L+ + IPV DL
Sbjct: 233 RAIGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLP 292
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMV-FKYLVNRIGPLSNAGLWSFT 355
VGENL+ L T PV + + L ++Q + +++ N G + + +
Sbjct: 293 GVGENLQDHLELYLQYACTQPVSLYPSLL---WWNQPAIGAEWMFNGTG-IGASNQFEAG 348
Query: 356 GYIDTLQNTARPDLEIHLL-----YFQQNDIRNM-------YLATLIRGT---------- 393
G+I T P+++ H L Y N ++ + + RG
Sbjct: 349 GFIRTRPEFKWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQVKSKDPRQ 408
Query: 394 ------DYITRLEQTEAIRLAGGTLMSLNLEACSQY---PWR-----------STHSWTC 433
+Y++ + + R + L E +Q P+R +
Sbjct: 409 HPSILFNYMSTEQDWQEFRDG----IRLTREIMAQPALDPYRGREISPGADVQTDEQLDK 464
Query: 434 YIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAIS 493
+IR T +P + MG D AVV + +V G+KGLRV D S++P I +A +
Sbjct: 465 FIREHAETAFHPSCSCKMGTDD--MAVVDGEGRVHGMKGLRVVDASIMPLIITGNLNATT 522
Query: 494 YMIGEKCADLVKTSYNIP 511
MI EK +D ++ +P
Sbjct: 523 IMIAEKISDKIRGRKPLP 540
>sp|B5Y008|BETA_KLEP3 Choline dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betA
PE=3 SV=1
Length = 554
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 175/559 (31%), Positives = 264/559 (47%), Gaps = 81/559 (14%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGY 125
AY EP + + + R++ GKGLGGSS + + Y RG + D +N+AK G W Y
Sbjct: 63 AYETEPEPY----MNHRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEHWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKE-NNIIREIFETSAQELGYPC 184
+ L Y+ K+E R + N+ HG G PV + K NN + E T+ + GYP
Sbjct: 119 LDCLPYYRKAET-RDIGPND---YHGGDG--PVSVTTPKPGNNPLFEAMVTAGVQAGYPR 172
Query: 185 PKDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQ 243
D+N Y GF + +T G R S A YL G R NL ++ +T II
Sbjct: 173 TDDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQARG-RPNL-TIRTHALTDHIIFAG 229
Query: 244 NVATGVEYVNSKGETV---RVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQ 300
A GVE++ +GE+ + TANKEV+L AGAIA+ Q+L SG+G L + IPV
Sbjct: 230 KRAVGVEWL--EGESTIPSKATANKEVLLCAGAIASPQILQRSGVGNPELLRQFDIPVVH 287
Query: 301 DLR-VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWS 353
DL VGENL+ L + PV + P + ++ ++L G + + +
Sbjct: 288 DLPGVGENLQDHLEMYLQYECKEPVSLY--PALQWWNQPKIGAEWLFGGTG-IGASNQFE 344
Query: 354 FTGYIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT-------- 393
G+I + A P+++ H L Y N ++ + RG
Sbjct: 345 AGGFIRSRAEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRLKSRDP 404
Query: 394 --------DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWT-C------- 433
+Y++ E +AIR+ T +N A +Y R T C
Sbjct: 405 HAHPAILFNYMSHEQDWQEFRDAIRI---TREIMNQPALDKYRGREISPGTECQSDAELD 461
Query: 434 -YIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAI 492
++R+ T +P GT MG D AVV + +V G++G+RV D S++P I +A
Sbjct: 462 EFVRNHAETAFHPCGTCKMGY--DEMAVVDGEGRVHGLEGVRVVDASIMPQIITGNLNAT 519
Query: 493 SYMIGEKCADLVKTSYNIP 511
+ MIGEK AD ++ +P
Sbjct: 520 TIMIGEKMADAIRGRQPLP 538
>sp|B0KN19|BETA_PSEPG Choline dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betA
PE=3 SV=1
Length = 565
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 258/557 (46%), Gaps = 77/557 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD IIVGA +AG LA RL+E + + VLL+EAGG +++P ++ L ++
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P + R++ GKGLGGSS + + Y RG + D++ +A+L G W Y
Sbjct: 65 AYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLQDWTY 120
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R + N+ HG +G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGEGPVSVATPKAGNNPLFHAMVEAGVQ-AGYPRT 175
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
+D+N Y GF + +T+ G R S A YL A KR NL ++ + +V+ D
Sbjct: 176 EDLNG-YQQEGFGPMDRSVTKNGRRSSTARGYLD-QAKKRPNLTIVTHALSDRVLF-DGK 232
Query: 245 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GV Y V E V A KEVI+++GAIA+ QLL SG+GP+A L+ + IPV DL
Sbjct: 233 RAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLP 292
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L T PV + + L ++Q + + + + + + G
Sbjct: 293 GVGENLQDHLELYLQYACTQPVSLYPSLL---WWNQPAIGAEWMFKGTGIGASNQFEAGG 349
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNM-------YLATLIRGT----------- 393
+I T P+++ H L Y N ++ + + RG
Sbjct: 350 FIRTRPEFKWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQAKSKDPRQH 409
Query: 394 -----DYITRLEQTEAIRLAGGTLMSLNLEACSQY---PWR-----------STHSWTCY 434
+Y++ + + R + L E +Q P+R + +
Sbjct: 410 PSILFNYMSTEQDWQEFRDG----IRLTREIMAQPALDPYRGREISPGADVQTDEQLDKF 465
Query: 435 IRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISY 494
IR T +P + MG D AVV + +V G+KGLRV D S++P I +A +
Sbjct: 466 IREHAETAFHPSCSCKMGTDD--MAVVDGEGRVHGMKGLRVVDASIMPLIITGNLNATTI 523
Query: 495 MIGEKCADLVKTSYNIP 511
MI EK +D ++ +P
Sbjct: 524 MIAEKISDKIRGRKPLP 540
>sp|B4SHV9|BETA_STRM5 Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain
R551-3) GN=betA PE=3 SV=1
Length = 560
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 164/549 (29%), Positives = 263/549 (47%), Gaps = 73/549 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIP-GMSSVLSLSEFDH 66
+D II+GA +AG VLA RL+E + + VLL+EAGG +++P ++ L ++
Sbjct: 7 YDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYNW 66
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P F + N R+ GKGLGGSS + + Y RG + DY+N+A + G W Y
Sbjct: 67 AYKTDPEPF----MNNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPGLEDWTY 122
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R + N+ HG +G L V K N + + E Q GYP
Sbjct: 123 LDCLPYFRKAET-RDIGPND---YHGGEGPLRVTTPKAGNNELFAAMVEAGVQA-GYPRT 177
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL +A R NL ++ + +++ + +
Sbjct: 178 DDLNG-YQQEGFGPMDRTVTPKGRRSSTARGYLD-LAKPRPNLTIVTHALTDRILFSGKR 235
Query: 245 VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR- 303
A GV+++++ + R TA +EV+L GAIA+ Q+L SG+GP L + I + L
Sbjct: 236 -AVGVQWLHND-QPQRATARREVLLCGGAIASPQILQRSGVGPADLLRSLDIDLVHHLPG 293
Query: 304 VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMV---FKYLVNRIGPLSNAGLWSF 354
VG NL+ L + PV + + LK +Y+Q + + +L IG SN +
Sbjct: 294 VGANLQDHLEMYLQYECKKPV-SLAPALK--LYNQPAIGAEWLFLGTGIG-ASNQ--FEA 347
Query: 355 TGYIDTLQNTARPDLEIHLL-----YFQQNDIR----NMYLATL---------IRGTD-- 394
G+I + P+L+ H L Y N I+ M++ ++ +R D
Sbjct: 348 GGFIRSDTEFDWPNLQYHFLPVAINYNGSNPIKAHSFQMHVGSMRSPSRGRIHVRSKDPR 407
Query: 395 --------YITRLEQTEAIRLAGGTLMSLNLE-ACSQYPWRSTHSWT---------CYIR 436
Y++ + R A + + A + Y R + ++R
Sbjct: 408 EHPSILFNYMSHDQDWREFRAAIRITREIFAQPALAPYSGREISPGSALQTDAQIDAFVR 467
Query: 437 HLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMI 496
T +P + MG+ADDP AVV +V G++GLR+ D S++P + +A + MI
Sbjct: 468 EHAETAYHPSCSNKMGHADDPMAVVDGQGRVHGLEGLRIVDASIMPQVVTGNLNAPTIMI 527
Query: 497 GEKCADLVK 505
EK AD+++
Sbjct: 528 AEKLADVIR 536
>sp|C6DKY4|BETA_PECCP Choline dehydrogenase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=betA PE=3 SV=1
Length = 559
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 170/556 (30%), Positives = 259/556 (46%), Gaps = 77/556 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
+D II+GA +AG VLA RL+E S + VLL+EAGG +++P ++ L ++
Sbjct: 3 YDYIIIGAGSAGNVLATRLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P + N R++ GKGLGGSS + + Y RG + D++N+A + G W Y
Sbjct: 63 AYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWATMPGLEDWSY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R V N+ HG G + V K N + + E Q GYP
Sbjct: 119 LDCLPYFRKAET-RDVGSND---YHGATGPVSVATPKMGNNELFHAMVEAGVQ-AGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL G R NL ++ + K++ +
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPKGRRASTARGYLDQAKG-RKNLTIVTHALTDKILFEGKR 231
Query: 245 VATGVEYVNSKGETVR-VTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GV Y KGE+ + V A +EV+L AGAIA+ Q+L SG+GPK L + IPV DL
Sbjct: 232 -AVGVAYF--KGESPQTVQARREVLLCAGAIASPQILQRSGVGPKDLLQGLDIPVVHDLP 288
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VGENL+ L PV + P + ++ ++L + G + + + G
Sbjct: 289 GVGENLQDHLEMYLQYACKEPVSLY--PALQWFNQPKIGAEWLFSGTG-IGASNQFEAGG 345
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNM-------YLATLIRGT----------- 393
+I + A P+++ H L Y N ++ + +L RG
Sbjct: 346 FIRSRDEFAWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSLSRGRVQVRSKDAREH 405
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNLEACSQYPWR---------STHSWTCYI 435
+Y++ E +AIR+ T + A +Y R + +I
Sbjct: 406 PSILFNYMSTEQDWQEFRDAIRI---TREIMAQPALDKYRGREISPGLEVQTDEELDEFI 462
Query: 436 RHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYM 495
R T +P + MG +D AVV +V G++GLRV D S++P I +A + M
Sbjct: 463 RTHAETAFHPSCSCKMG--EDEMAVVDGQGRVHGMEGLRVVDASIMPQIITGNLNATTIM 520
Query: 496 IGEKCADLVKTSYNIP 511
I EK AD ++ +P
Sbjct: 521 IAEKIADRIRRRQPLP 536
>sp|B2FQ89|BETA_STRMK Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain
K279a) GN=betA PE=3 SV=1
Length = 560
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 261/549 (47%), Gaps = 73/549 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIP-GMSSVLSLSEFDH 66
+D II+GA +AG VLA RL+E + + VLL+EAGG +++P ++ L ++
Sbjct: 7 YDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYNW 66
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P F + N R+ GKGLGGSS + + Y RG + DY+N+A + G W Y
Sbjct: 67 AYKTDPEPF----MNNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPGLEDWTY 122
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R + N+ HG G L V K N + + E Q GYP
Sbjct: 123 LDCLPYFRKAET-RDIGPND---YHGGDGPLRVTTPKAGNNELFAAMVEAGVQA-GYPRT 177
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL +A R NL ++ + +++ + +
Sbjct: 178 DDLNG-YQQEGFGPMDRTVTPKGRRSSTARGYLD-LAKPRPNLTIVTHALTDRILFSGKR 235
Query: 245 VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR- 303
A GV+++ + + R TA +EV+L GAIA+ Q+L SG+GP L + I + L
Sbjct: 236 -AVGVQWLRND-QPQRATARREVLLCGGAIASPQILQRSGVGPADLLRSLDIDLVHHLPG 293
Query: 304 VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMV---FKYLVNRIGPLSNAGLWSF 354
VG NL+ L + PV + + LK +Y+Q + + +L IG SN +
Sbjct: 294 VGANLQDHLEMYLQYECKKPV-SLAPALK--LYNQPAIGAEWLFLGTGIG-ASNQ--FEA 347
Query: 355 TGYIDTLQNTARPDLEIHLL-----YFQQNDIR----NMYLATL---------IRGTD-- 394
G+I + P+L+ H L Y N I+ M++ ++ +R D
Sbjct: 348 GGFIRSDAEFDWPNLQYHFLPVAINYNGSNPIKAHSFQMHVGSMRSPSRGRIHVRSKDPR 407
Query: 395 --------YITRLEQTEAIRLAGGTLMSLNLE-ACSQYPWRSTHSWT---------CYIR 436
Y++ + R A + + A + Y R + ++R
Sbjct: 408 EHPSILFNYMSHEQDWREFRAAIRITREIFAQPALAPYSGREISPGSALQTDAQIDAFVR 467
Query: 437 HLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMI 496
T +P + MG+ADDP AVV +V G++GLR+ D S++P + +A + M+
Sbjct: 468 EHAETAYHPSCSNKMGHADDPMAVVDGQGRVHGLEGLRIVDASIMPQVVTGNLNAPTIMM 527
Query: 497 GEKCADLVK 505
EK AD+++
Sbjct: 528 AEKLADVIR 536
>sp|Q3K5H3|BETA_PSEPF Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1)
GN=betA PE=3 SV=1
Length = 567
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 172/563 (30%), Positives = 255/563 (45%), Gaps = 89/563 (15%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD IIVGA +AG LA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P + R++ GKGLGGSS + + Y RG + DY+ +AKL G W Y
Sbjct: 65 AYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDWSY 120
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGDGPVSVTTPKAGNNPLFHAMVEAGVQ-AGYPRT 175
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
+D+N Y GF + +T G R S A YL +A KR+ L ++ + KV+ +
Sbjct: 176 EDLNG-YQQEGFGPMDRTVTPNGRRASTARGYLD-VAKKRSTLTIVTHALTDKVLFEGKR 233
Query: 245 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GV Y V + E V A KEVI+ +GAIA+ QLL SG+GP L+ + IPV DL
Sbjct: 234 -AVGVRYLVGAAEERVEARARKEVIVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLP 292
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMV-FKYLVNRIGPLSNAGLWSFT 355
VGENL+ L T PV + + L Y+Q + ++L N G + + +
Sbjct: 293 GVGENLQDHLELYLQYACTQPVSLYPSLL---WYNQPAIGAEWLFNGTG-IGASNQFEAG 348
Query: 356 GYIDTLQNTARPDLEIHLL-----YFQQNDIRNM-------------------------- 384
G+I T P+++ H L Y N ++
Sbjct: 349 GFIRTRPEFEWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPSRGRVQVKSKDPRQ 408
Query: 385 -------YLATL---------IRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRST 428
Y+AT IR T I + +A R G +S +E ++
Sbjct: 409 HPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDAFR---GREISPGIEV------QTD 459
Query: 429 HSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQ 488
+IR T +P + MG D AVV + +V G++GLRV D S++P
Sbjct: 460 EQLDKFIREHAETAFHPSCSCKMGTDD--MAVVDGEGRVHGMQGLRVVDASIMPIITTGN 517
Query: 489 SDAISYMIGEKCADLVKTSYNIP 511
+A + M+ EK AD ++ +P
Sbjct: 518 LNAPTIMMAEKIADKIRGRQPLP 540
>sp|C3K3D3|BETA_PSEFS Choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25)
GN=betA PE=3 SV=1
Length = 567
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 170/559 (30%), Positives = 256/559 (45%), Gaps = 81/559 (14%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
+D IIVGA +AG LA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 5 YDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNW 64
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P + R++ GKGLGGSS + + Y RG + DY+N+AKL G W Y
Sbjct: 65 AYETDPEPH----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLPGLENWTY 120
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R + N+ HG +G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGEGPVSVTTPKAGNNPLFHAMVEAGVQ-AGYPRT 175
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T+ G R S A YL A KR+ L ++ + KV+ +
Sbjct: 176 DDLNG-YQQEGFGPMDRTVTKNGRRASTARGYLD-TAKKRSTLTIVTHALTDKVLFEGKR 233
Query: 245 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GV Y + + E V A KEV++ +GAIA+ QLL SG+GP L+ + IPV DL
Sbjct: 234 -AVGVRYLIGAAEERVEARARKEVLVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLP 292
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMV-FKYLVNRIGPLSNAGLWSFT 355
VGENL+ L T PV + + L Y+Q + ++L N G + + +
Sbjct: 293 GVGENLQDHLELYLQYACTQPVSLYPSLL---WYNQPAIGAEWLFNGTG-IGASNQFEAG 348
Query: 356 GYIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RG---------TD 394
G+I + P+++ H L Y N ++ + RG D
Sbjct: 349 GFIRSRPEFDWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPSRGRVQLKSKNPRD 408
Query: 395 YITRL-----------EQTEAIRLAGGTLMSLNLEACSQYPWR-----------STHSWT 432
Y + L E + IRL + L+ P+R +
Sbjct: 409 YPSILFNYMATEQDWQEFRDGIRLTREIMQQPALD-----PYRGREISPGIDVQTDEQLD 463
Query: 433 CYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAI 492
+IR T +P + MG D AVV + +V G++GLRV D S++P +A
Sbjct: 464 KFIREHAETAFHPSCSCKMGT--DEMAVVDGEGRVHGMQGLRVVDASIMPIITTGNLNAP 521
Query: 493 SYMIGEKCADLVKTSYNIP 511
+ MI EK AD ++ +P
Sbjct: 522 TIMIAEKIADKIRGRQPLP 540
>sp|Q4K4K7|BETA_PSEF5 Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 /
ATCC BAA-477) GN=betA PE=3 SV=1
Length = 567
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 259/560 (46%), Gaps = 83/560 (14%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
+D IIVGA +AG LA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 5 YDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P + R++ GKGLGGSS + + Y RG + DY+ +AKL G W Y
Sbjct: 65 AYETDPEPH----MNGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDWTY 120
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R + N+ HG +G + V K N + + E Q GYP
Sbjct: 121 LDCLPYFRKAET-RDIGPND---YHGGEGPVSVTTPKAGNNPLFHAMVEAGVQ-AGYPRT 175
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
+D+N Y GF + +T G R S A YL A KR+ L ++ + K++ +
Sbjct: 176 EDLNG-YQQEGFGPMDRTVTPKGRRASTARGYLD-TAKKRSTLTIVTHALTDKILFEGKR 233
Query: 245 VATGVEYVN-SKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A GV Y+ S E V A KEVI+++GAIA+ QLL SG+GP+A L+ + IPV DL
Sbjct: 234 -AVGVSYLQGSTEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLP 292
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMV-FKYLVNRIGPLSNAGLWSFT 355
VGENL+ L T PV + + L ++Q + ++L N G + + +
Sbjct: 293 GVGENLQDHLELYLQYACTQPVSLYPSLL---WWNQPAIGAEWLFNGTG-IGASNQFEAG 348
Query: 356 GYIDTLQNTARPDLEIHLL-----YFQQNDIRNM-------------------------- 384
G+I T + P+++ H L Y N ++
Sbjct: 349 GFIRTREEFEWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPSRGRVQLKSKDPRQ 408
Query: 385 -------YLATLIRGTDY-----ITR-LEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSW 431
Y+AT ++ +TR + Q A+ G +S +E ++
Sbjct: 409 HPSILFNYMATEQDWQEFRDGIRLTREIMQQPALDPFRGREISPGIEV------QTDEQL 462
Query: 432 TCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDA 491
++R T +P + MG D AVV +V G++GLRV D S++P +A
Sbjct: 463 DKFVREHAETAFHPSCSCKMGTDD--MAVVDGQGRVHGMQGLRVVDASIMPIITTGNLNA 520
Query: 492 ISYMIGEKCADLVKTSYNIP 511
+ M+ EK AD ++ +P
Sbjct: 521 PTIMMAEKIADKIRGRQPLP 540
>sp|B4EX94|BETA_PROMH Choline dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=betA
PE=3 SV=1
Length = 555
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 254/558 (45%), Gaps = 79/558 (14%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIP-GMSSVLSLSEFDH 66
+D II+GA +AG VLA RL+E + VLL+EAGG +++P ++ L ++
Sbjct: 3 YDYIIIGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYNW 62
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY EP + N R++ GKGLGGSS + + Y RG + D++ +AKL G W Y
Sbjct: 63 AYETEPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDEWAKLPGLEDWNY 118
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
L YF K+E R + N+ HG G + V K K NN++ + + GYP
Sbjct: 119 LNCLPYFRKAET-RDIGAND---YHGDSGPVSVTTPK-KGNNVLFHAMVEAGVQAGYPRT 173
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T +G R S A YL A R NL ++ T +I +
Sbjct: 174 DDLNG-YQQEGFGPMDRTVTPHGRRASTARGYLDQ-AKSRKNL-TIETHATTDIIEFEGK 230
Query: 245 VATGVEYVNSKGETVR-VTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI-PVKQDL 302
A+GV Y T + V A KE++L AGAIA+ Q+L SG+GP+ L+E I PV
Sbjct: 231 KASGVRYFKGTNTTPQHVKARKEILLCAGAIASPQILQRSGVGPEDVLNEFDISPVHVLP 290
Query: 303 RVGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VG+NL+ L + PV + A LK Y+Q + + + + + + G
Sbjct: 291 GVGQNLQDHLEMYLQYECKQPVSLYPA-LK--WYNQPKIGAEWLFKGTGIGASNQFEAGG 347
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGTDYITRLEQTE- 403
+I + + A P+++ H L Y N + + RG IT + +
Sbjct: 348 FIRSSEKFAWPNIQFHFLPVAINYNGSNAVEVHGFQAHVGSMRSPSRGRIKITSRDPHQH 407
Query: 404 -------------------AIRLAGGTLMSLNLEACSQYPWR-----------STHSWTC 433
AIR+ + L+ P+R +
Sbjct: 408 PSILFNYMSTEQDWQEFRAAIRITREIMAQPALD-----PYRGEEISPGKDIQTDEQLDA 462
Query: 434 YIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAIS 493
++R T +P G+ MGN D AVV +V GI+ LRV D S++PN I +A +
Sbjct: 463 FVRERAETAFHPCGSCKMGN--DEMAVVDGAGRVHGIESLRVIDASIMPNIITGNLNATT 520
Query: 494 YMIGEKCADLVKTSYNIP 511
MI EK AD +K +P
Sbjct: 521 IMIAEKMADKIKGIKPLP 538
>sp|A4XPI5|BETA_PSEMY Choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betA
PE=3 SV=1
Length = 565
Score = 171 bits (434), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 253/553 (45%), Gaps = 69/553 (12%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPG-MSSVLSLSEFDH 66
FD II+GA +AG VLA RL+E + + VLL+EAGG +++P ++ L ++
Sbjct: 5 FDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNW 64
Query: 67 AYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGY 125
AY +P + N R++ GKGLGGSS + + Y RG + D++N+AK G W Y
Sbjct: 65 AYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDNWAKAKGLEDWTY 120
Query: 126 DETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCP 185
+ L YF K+E R + N+ HG G + V K N + + E Q GYP
Sbjct: 121 HDCLPYFRKAES-RDIGPND---YHGGDGPVSVTTPKAGNNPLFHAMVEAGVQ-AGYPRT 175
Query: 186 KDMNDRYVDVGFAELP-GMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN 244
D+N Y GF + +T G R S A YL A +R NL ++ + +++ D
Sbjct: 176 DDLNG-YQQEGFGPMDRTVTPQGRRASTARGYLDQ-ARERPNLTIVTHATTDRILF-DGK 232
Query: 245 VATGVEY-VNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR 303
A+GV Y + + + A +EV+L AGAIA+ Q+L SG+GP A L E+ I + +L
Sbjct: 233 RASGVSYLIGNANDATEARARREVLLCAGAIASPQILQRSGVGPAALLRELDIALVHELP 292
Query: 304 -VGENLK------LNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLSNAGLWSFTG 356
VG+NL+ L T PV + P + + + ++L G + + + G
Sbjct: 293 GVGQNLQDHLEMYLQYACTQPVSLY--PALKLLNQPGIGAQWLFTGNG-IGASNQFEAGG 349
Query: 357 YIDTLQNTARPDLEIHLL-----YFQQNDIRNMYLATLI-------RGT----------- 393
+I T A P+++ H L Y N + + RG
Sbjct: 350 FIRTRPEFAWPNIQFHFLPVAINYNGSNAVNEHGFQAHVGSMRSPSRGRIQLKSKDPRQH 409
Query: 394 -----DYITR----LEQTEAIRLAGGTLMSLNL------EACSQYPWRSTHSWTCYIRHL 438
+Y++ E +AIR+ + L E +S +IR
Sbjct: 410 PSILFNYMSHEQDWQEFRDAIRITREIMAQPALDSYRGREISPGIDCQSDAELDAFIREH 469
Query: 439 TTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGE 498
T +P + MG +D AVV +V G++GLRV D S++P I +A + M+ E
Sbjct: 470 AETAFHPSCSCKMG--EDDMAVVDGQGRVHGVQGLRVVDASIMPEIITGNLNATTIMMAE 527
Query: 499 KCADLVKTSYNIP 511
K AD ++ +P
Sbjct: 528 KIADRIRDRQPLP 540
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,216,921
Number of Sequences: 539616
Number of extensions: 7684804
Number of successful extensions: 21106
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 20361
Number of HSP's gapped (non-prelim): 334
length of query: 512
length of database: 191,569,459
effective HSP length: 122
effective length of query: 390
effective length of database: 125,736,307
effective search space: 49037159730
effective search space used: 49037159730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)