Query psy1059
Match_columns 512
No_of_seqs 232 out of 2137
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 22:15:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 1.2E-84 4.2E-89 672.2 37.9 483 10-507 2-565 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 7.3E-82 2.5E-86 652.1 38.1 483 7-509 16-580 (583)
3 3q9t_A Choline dehydrogenase a 100.0 2.5E-79 8.6E-84 634.0 37.3 480 7-509 3-574 (577)
4 1gpe_A Protein (glucose oxidas 100.0 4.7E-76 1.6E-80 615.0 33.3 482 8-510 22-585 (587)
5 3t37_A Probable dehydrogenase; 100.0 8.4E-74 2.9E-78 596.9 40.9 469 7-505 14-521 (526)
6 2jbv_A Choline oxidase; alcoho 100.0 1.2E-72 4.2E-77 585.4 45.2 480 8-510 11-532 (546)
7 1ju2_A HydroxynitrIle lyase; f 100.0 7E-64 2.4E-68 518.6 26.1 447 8-507 24-516 (536)
8 1kdg_A CDH, cellobiose dehydro 100.0 8.4E-62 2.9E-66 506.9 25.3 463 7-511 4-546 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 3.6E-57 1.2E-61 466.1 29.3 438 8-509 3-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 4.8E-56 1.6E-60 457.7 29.8 439 5-508 6-505 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 4.2E-45 1.4E-49 383.2 29.7 438 8-510 44-615 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.7 1.7E-15 5.8E-20 156.1 20.5 66 215-282 206-272 (510)
13 1qo8_A Flavocytochrome C3 fuma 99.5 1.1E-13 3.8E-18 144.4 15.4 63 215-280 254-318 (566)
14 1y0p_A Fumarate reductase flav 99.5 4.2E-13 1.4E-17 140.2 17.4 64 215-281 259-324 (571)
15 2h88_A Succinate dehydrogenase 99.4 2.6E-12 8.7E-17 134.2 18.1 57 217-276 161-218 (621)
16 3dme_A Conserved exported prot 99.4 2.4E-13 8.1E-18 134.2 9.3 64 217-286 156-220 (369)
17 2bs2_A Quinol-fumarate reducta 99.4 2.5E-12 8.4E-17 135.3 17.3 52 223-276 169-221 (660)
18 2wdq_A Succinate dehydrogenase 99.4 3.5E-12 1.2E-16 133.0 17.1 53 223-276 154-207 (588)
19 1d4d_A Flavocytochrome C fumar 99.4 5.8E-12 2E-16 131.3 18.0 65 215-282 259-325 (572)
20 4dgk_A Phytoene dehydrogenase; 99.4 2.8E-12 9.6E-17 132.1 15.2 58 217-281 227-284 (501)
21 1chu_A Protein (L-aspartate ox 99.4 5.4E-12 1.9E-16 130.3 16.2 52 224-276 151-209 (540)
22 1y56_B Sarcosine oxidase; dehy 99.4 2.6E-12 9E-17 127.4 13.0 60 217-285 155-214 (382)
23 3gyx_A Adenylylsulfate reducta 99.3 2.2E-12 7.6E-17 135.5 10.8 48 226-275 182-233 (662)
24 3da1_A Glycerol-3-phosphate de 99.3 8.9E-12 3.1E-16 129.4 15.1 61 223-286 181-242 (561)
25 2gag_B Heterotetrameric sarcos 99.3 6.1E-12 2.1E-16 125.8 13.4 60 217-285 180-239 (405)
26 1jnr_A Adenylylsulfate reducta 99.3 9.1E-12 3.1E-16 131.4 15.0 52 223-276 162-219 (643)
27 3nyc_A D-arginine dehydrogenas 99.3 5.9E-12 2E-16 124.8 12.7 54 223-285 165-218 (381)
28 3dje_A Fructosyl amine: oxygen 99.3 4E-12 1.4E-16 128.6 11.3 56 217-280 167-225 (438)
29 1kf6_A Fumarate reductase flav 99.3 3.7E-11 1.3E-15 125.6 18.2 53 223-277 145-199 (602)
30 2rgh_A Alpha-glycerophosphate 99.3 3.7E-11 1.3E-15 125.0 15.9 60 223-285 199-259 (571)
31 2i0z_A NAD(FAD)-utilizing dehy 99.3 4.8E-12 1.6E-16 128.1 8.2 64 216-286 139-211 (447)
32 1pj5_A N,N-dimethylglycine oxi 99.2 3.3E-11 1.1E-15 131.3 13.6 55 223-285 162-216 (830)
33 2oln_A NIKD protein; flavoprot 99.2 1.9E-10 6.3E-15 114.7 14.5 36 9-45 3-38 (397)
34 3ps9_A TRNA 5-methylaminomethy 99.2 7.5E-11 2.6E-15 125.7 11.9 36 9-45 271-306 (676)
35 1rp0_A ARA6, thiazole biosynth 99.2 1.9E-10 6.4E-15 109.0 12.3 49 223-273 131-189 (284)
36 3axb_A Putative oxidoreductase 99.2 2.5E-11 8.4E-16 123.1 6.6 34 9-43 22-56 (448)
37 3pvc_A TRNA 5-methylaminomethy 99.1 3.8E-10 1.3E-14 120.4 14.5 36 9-45 263-298 (689)
38 2gf3_A MSOX, monomeric sarcosi 99.1 5E-10 1.7E-14 111.1 14.2 35 10-45 3-37 (389)
39 1ryi_A Glycine oxidase; flavop 99.1 3E-10 1E-14 112.6 12.1 37 7-44 14-50 (382)
40 2qcu_A Aerobic glycerol-3-phos 99.1 2.1E-10 7.2E-15 117.7 10.9 55 223-281 160-215 (501)
41 3v76_A Flavoprotein; structura 99.1 2.1E-10 7.3E-15 114.3 10.5 37 8-45 25-61 (417)
42 2e5v_A L-aspartate oxidase; ar 99.1 6.1E-10 2.1E-14 113.2 13.7 52 217-275 125-176 (472)
43 3nlc_A Uncharacterized protein 99.1 1.6E-10 5.6E-15 118.4 8.7 62 217-285 226-289 (549)
44 3jsk_A Cypbp37 protein; octame 99.1 5.9E-10 2E-14 106.6 11.2 37 9-45 78-115 (344)
45 3ka7_A Oxidoreductase; structu 99.1 1.2E-09 4.1E-14 109.8 13.8 57 217-281 202-258 (425)
46 3oz2_A Digeranylgeranylglycero 99.1 8.8E-10 3E-14 109.5 12.4 55 215-273 106-160 (397)
47 2uzz_A N-methyl-L-tryptophan o 99.0 1.7E-09 6E-14 106.5 13.6 35 10-45 2-36 (372)
48 3cgv_A Geranylgeranyl reductas 99.0 1.6E-09 5.3E-14 107.9 12.5 66 215-286 106-171 (397)
49 3e1t_A Halogenase; flavoprotei 99.0 1.2E-09 4.2E-14 112.4 10.9 58 215-275 115-172 (512)
50 2gjc_A Thiazole biosynthetic e 98.9 3.1E-09 1.1E-13 101.0 10.9 37 9-45 64-101 (326)
51 2gqf_A Hypothetical protein HI 98.9 3.9E-09 1.3E-13 104.8 12.1 35 10-45 4-38 (401)
52 3nix_A Flavoprotein/dehydrogen 98.8 1.8E-08 6.2E-13 101.0 12.7 36 9-45 4-39 (421)
53 3atr_A Conserved archaeal prot 98.8 1.7E-08 5.7E-13 102.3 12.4 58 215-275 104-162 (453)
54 3i3l_A Alkylhalidase CMLS; fla 98.8 1.4E-08 4.8E-13 105.6 11.7 56 215-274 132-187 (591)
55 2zxi_A TRNA uridine 5-carboxym 98.8 3.5E-09 1.2E-13 109.0 6.9 53 216-275 128-180 (637)
56 3ces_A MNMG, tRNA uridine 5-ca 98.8 3E-09 1E-13 109.9 6.5 35 9-44 27-61 (651)
57 3nrn_A Uncharacterized protein 98.8 3.8E-08 1.3E-12 98.7 14.3 55 217-281 195-249 (421)
58 3p1w_A Rabgdi protein; GDI RAB 98.8 5.7E-09 2E-13 104.7 7.4 40 7-47 17-56 (475)
59 3c4n_A Uncharacterized protein 98.8 4.3E-09 1.5E-13 105.0 5.8 37 9-45 35-72 (405)
60 2gmh_A Electron transfer flavo 98.8 1.8E-08 6E-13 105.1 10.5 70 215-286 148-230 (584)
61 2qa1_A PGAE, polyketide oxygen 98.7 5.5E-08 1.9E-12 99.5 12.2 39 6-45 7-45 (500)
62 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 1.5E-08 5.1E-13 98.6 7.6 34 11-45 2-38 (342)
63 3ihg_A RDME; flavoenzyme, anth 98.7 1.9E-07 6.4E-12 96.7 16.2 36 9-45 4-39 (535)
64 3lxd_A FAD-dependent pyridine 98.7 1.4E-07 4.7E-12 94.4 14.2 65 215-286 198-262 (415)
65 3k7m_X 6-hydroxy-L-nicotine ox 98.7 7.6E-08 2.6E-12 96.8 12.2 36 10-46 1-36 (431)
66 1yvv_A Amine oxidase, flavin-c 98.7 5.5E-08 1.9E-12 94.3 10.7 35 10-45 2-36 (336)
67 2qa2_A CABE, polyketide oxygen 98.7 7E-08 2.4E-12 98.7 11.9 38 7-45 9-46 (499)
68 3cp8_A TRNA uridine 5-carboxym 98.7 1.5E-08 5.1E-13 104.7 6.9 37 7-44 18-54 (641)
69 3fmw_A Oxygenase; mithramycin, 98.7 6.8E-08 2.3E-12 100.2 11.2 36 9-45 48-83 (570)
70 3itj_A Thioredoxin reductase 1 98.6 7.9E-08 2.7E-12 93.1 9.3 56 223-280 220-276 (338)
71 3i6d_A Protoporphyrinogen oxid 98.6 1E-07 3.5E-12 96.9 10.4 37 10-47 5-47 (470)
72 3o0h_A Glutathione reductase; 98.6 2E-07 6.9E-12 95.1 12.1 61 217-285 238-300 (484)
73 2x3n_A Probable FAD-dependent 98.6 6.4E-08 2.2E-12 96.3 7.9 36 9-45 5-40 (399)
74 3r9u_A Thioredoxin reductase; 98.6 3.7E-08 1.3E-12 94.4 5.9 61 217-280 189-249 (315)
75 1mo9_A ORF3; nucleotide bindin 98.6 1.9E-07 6.7E-12 96.1 11.6 68 216-286 260-328 (523)
76 3f8d_A Thioredoxin reductase ( 98.6 3.7E-07 1.3E-11 87.7 12.7 66 216-285 195-261 (323)
77 2bry_A NEDD9 interacting prote 98.6 3.7E-08 1.3E-12 100.7 5.3 37 8-45 90-126 (497)
78 4a9w_A Monooxygenase; baeyer-v 98.6 9E-08 3.1E-12 93.4 7.5 34 10-44 3-36 (357)
79 3fg2_P Putative rubredoxin red 98.5 1.3E-07 4.5E-12 94.1 8.4 65 215-286 188-252 (404)
80 3kkj_A Amine oxidase, flavin-c 98.5 6.2E-08 2.1E-12 90.9 4.8 36 10-46 2-37 (336)
81 3lov_A Protoporphyrinogen oxid 98.5 1.7E-07 5.7E-12 95.5 8.1 36 10-46 4-41 (475)
82 2dkh_A 3-hydroxybenzoate hydro 98.5 1.3E-07 4.4E-12 99.8 7.4 37 8-45 30-67 (639)
83 2r0c_A REBC; flavin adenine di 98.5 9.2E-07 3.1E-11 91.6 13.6 36 9-45 25-60 (549)
84 3s5w_A L-ornithine 5-monooxyge 98.5 5.2E-07 1.8E-11 91.5 11.4 37 9-46 29-70 (463)
85 3lzw_A Ferredoxin--NADP reduct 98.4 4.8E-07 1.6E-11 87.3 9.5 35 9-44 6-40 (332)
86 1trb_A Thioredoxin reductase; 98.4 1.5E-06 5.1E-11 83.4 11.6 61 217-280 190-252 (320)
87 3l8k_A Dihydrolipoyl dehydroge 98.4 9.9E-07 3.4E-11 89.5 10.2 35 9-44 3-37 (466)
88 4ap3_A Steroid monooxygenase; 98.4 8.4E-07 2.9E-11 91.6 9.8 36 8-44 19-54 (549)
89 3uox_A Otemo; baeyer-villiger 98.4 4.8E-07 1.6E-11 93.3 7.8 37 8-45 7-43 (545)
90 3gwf_A Cyclohexanone monooxyge 98.4 5.6E-07 1.9E-11 92.7 8.3 36 9-45 7-43 (540)
91 4gde_A UDP-galactopyranose mut 98.4 1.5E-07 5.2E-12 96.8 3.8 43 6-48 6-48 (513)
92 1q1r_A Putidaredoxin reductase 98.3 5.6E-07 1.9E-11 90.3 7.5 64 216-286 196-261 (431)
93 3iwa_A FAD-dependent pyridine 98.3 6.8E-07 2.3E-11 90.9 8.1 64 215-286 206-269 (472)
94 4fk1_A Putative thioredoxin re 98.3 2.4E-07 8.3E-12 88.4 4.2 35 9-44 5-39 (304)
95 2bcg_G Secretory pathway GDP d 98.3 3.8E-07 1.3E-11 92.2 5.3 42 6-48 7-48 (453)
96 4a5l_A Thioredoxin reductase; 98.3 2.9E-07 1E-11 88.2 4.2 36 8-44 2-37 (314)
97 4gcm_A TRXR, thioredoxin reduc 98.3 4E-07 1.4E-11 87.2 4.5 35 9-44 5-39 (312)
98 3fpz_A Thiazole biosynthetic e 98.3 5.7E-07 1.9E-11 86.7 5.4 39 8-46 63-102 (326)
99 2xve_A Flavin-containing monoo 98.3 5.1E-06 1.7E-10 84.1 12.3 64 215-280 105-171 (464)
100 1c0p_A D-amino acid oxidase; a 98.2 9.1E-07 3.1E-11 86.7 4.9 37 8-45 4-40 (363)
101 3rp8_A Flavoprotein monooxygen 98.2 9.2E-07 3.1E-11 88.1 4.8 38 7-45 20-57 (407)
102 1v0j_A UDP-galactopyranose mut 98.1 1.4E-06 5E-11 86.3 4.6 41 7-47 4-44 (399)
103 4hb9_A Similarities with proba 98.1 4.7E-06 1.6E-10 82.8 8.3 33 12-45 3-35 (412)
104 3ef6_A Toluene 1,2-dioxygenase 98.1 2.3E-06 7.8E-11 85.3 4.8 64 215-286 189-252 (410)
105 2cul_A Glucose-inhibited divis 98.0 2.7E-06 9.2E-11 77.6 4.4 34 10-44 3-36 (232)
106 3hdq_A UDP-galactopyranose mut 98.0 3.3E-06 1.1E-10 83.0 5.1 38 8-46 27-64 (397)
107 3dgh_A TRXR-1, thioredoxin red 98.0 3.1E-06 1.1E-10 86.2 4.7 62 216-280 232-294 (483)
108 2b9w_A Putative aminooxidase; 98.0 4.4E-06 1.5E-10 83.6 5.6 39 8-47 4-43 (424)
109 2ivd_A PPO, PPOX, protoporphyr 98.0 3.9E-06 1.3E-10 85.5 5.1 41 6-47 12-52 (478)
110 2xdo_A TETX2 protein; tetracyc 98.0 4.5E-06 1.5E-10 82.8 5.3 37 8-45 24-60 (398)
111 1i8t_A UDP-galactopyranose mut 98.0 4.1E-06 1.4E-10 82.0 4.7 36 10-46 1-36 (367)
112 1s3e_A Amine oxidase [flavin-c 98.0 4E-06 1.4E-10 86.3 4.9 37 9-46 3-39 (520)
113 2vvm_A Monoamine oxidase N; FA 98.0 5.1E-06 1.7E-10 85.0 5.2 37 10-47 39-75 (495)
114 1sez_A Protoporphyrinogen oxid 98.0 5.7E-06 2E-10 84.8 5.6 39 8-47 11-49 (504)
115 3ab1_A Ferredoxin--NADP reduct 97.9 4.9E-06 1.7E-10 81.3 4.6 65 217-284 208-272 (360)
116 3lad_A Dihydrolipoamide dehydr 97.9 3.6E-06 1.2E-10 85.6 3.8 36 9-45 2-37 (476)
117 2jae_A L-amino acid oxidase; o 97.9 6.6E-06 2.3E-10 84.0 5.7 41 7-48 8-48 (489)
118 2e1m_A L-glutamate oxidase; L- 97.9 7.9E-06 2.7E-10 79.6 5.5 39 7-46 41-80 (376)
119 1d5t_A Guanine nucleotide diss 97.9 7.2E-06 2.5E-10 82.2 5.5 41 7-48 3-43 (433)
120 3nks_A Protoporphyrinogen oxid 97.9 6.5E-06 2.2E-10 83.7 5.2 36 11-47 3-40 (477)
121 4b1b_A TRXR, thioredoxin reduc 97.9 6.2E-06 2.1E-10 84.6 5.0 35 10-45 42-76 (542)
122 3cty_A Thioredoxin reductase; 97.9 5.6E-06 1.9E-10 79.4 4.4 37 7-44 13-49 (319)
123 3c96_A Flavin-containing monoo 97.9 5.7E-06 1.9E-10 82.4 4.4 35 10-45 4-39 (410)
124 1k0i_A P-hydroxybenzoate hydro 97.9 5E-06 1.7E-10 82.3 3.9 34 10-44 2-35 (394)
125 3alj_A 2-methyl-3-hydroxypyrid 97.9 7.2E-06 2.4E-10 80.7 4.9 35 10-45 11-45 (379)
126 1rsg_A FMS1 protein; FAD bindi 97.9 5.6E-06 1.9E-10 85.1 4.3 38 9-47 7-45 (516)
127 4dna_A Probable glutathione re 97.9 7.3E-06 2.5E-10 83.0 5.0 35 9-44 4-38 (463)
128 3urh_A Dihydrolipoyl dehydroge 97.9 7E-06 2.4E-10 83.8 4.6 66 216-285 244-312 (491)
129 3g3e_A D-amino-acid oxidase; F 97.9 4.5E-06 1.5E-10 81.3 2.8 33 12-45 2-40 (351)
130 2vou_A 2,6-dihydroxypyridine h 97.9 9.3E-06 3.2E-10 80.5 5.1 36 9-45 4-39 (397)
131 2yg5_A Putrescine oxidase; oxi 97.9 8.4E-06 2.9E-10 82.3 4.8 38 9-47 4-41 (453)
132 3qfa_A Thioredoxin reductase 1 97.9 9.5E-06 3.3E-10 83.3 5.1 37 7-44 29-65 (519)
133 2ywl_A Thioredoxin reductase r 97.9 9.3E-06 3.2E-10 70.7 4.2 33 11-44 2-34 (180)
134 3hyw_A Sulfide-quinone reducta 97.8 2E-05 6.7E-10 79.0 6.8 62 215-285 204-265 (430)
135 3dk9_A Grase, GR, glutathione 97.8 7.2E-06 2.5E-10 83.4 3.6 36 8-44 18-53 (478)
136 3ihm_A Styrene monooxygenase A 97.8 7.8E-06 2.7E-10 81.9 3.7 34 10-44 22-55 (430)
137 2q7v_A Thioredoxin reductase; 97.8 9.7E-06 3.3E-10 77.9 4.2 55 223-280 199-254 (325)
138 3fbs_A Oxidoreductase; structu 97.8 1E-05 3.5E-10 76.5 4.2 34 10-44 2-35 (297)
139 2aqj_A Tryptophan halogenase, 97.8 1.1E-05 3.7E-10 83.4 4.6 36 9-45 4-42 (538)
140 3ic9_A Dihydrolipoamide dehydr 97.8 1.1E-05 3.7E-10 82.3 4.5 64 217-285 221-286 (492)
141 2zbw_A Thioredoxin reductase; 97.8 1.2E-05 4.2E-10 77.5 4.4 36 9-45 4-39 (335)
142 3dgz_A Thioredoxin reductase 2 97.8 1.2E-05 4E-10 82.1 4.3 61 216-279 230-291 (488)
143 1ges_A Glutathione reductase; 97.8 1.4E-05 4.7E-10 80.6 4.6 35 9-44 3-37 (450)
144 2r9z_A Glutathione amide reduc 97.8 1.4E-05 4.7E-10 80.9 4.5 35 9-44 3-37 (463)
145 3g5s_A Methylenetetrahydrofola 97.8 1.5E-05 5.1E-10 76.7 4.4 34 11-45 2-35 (443)
146 2gv8_A Monooxygenase; FMO, FAD 97.8 3.1E-05 1E-09 78.0 6.7 37 9-46 5-43 (447)
147 2hqm_A GR, grase, glutathione 97.7 1.5E-05 5.2E-10 81.0 4.2 36 8-44 9-44 (479)
148 4dsg_A UDP-galactopyranose mut 97.7 1.8E-05 6.2E-10 80.5 4.7 38 8-46 7-45 (484)
149 1zk7_A HGII, reductase, mercur 97.7 1.9E-05 6.7E-10 80.0 4.8 36 8-44 2-37 (467)
150 2bi7_A UDP-galactopyranose mut 97.7 2.5E-05 8.4E-10 76.9 5.2 37 10-47 3-39 (384)
151 2eq6_A Pyruvate dehydrogenase 97.7 1.7E-05 5.7E-10 80.4 4.0 65 216-285 215-283 (464)
152 1w4x_A Phenylacetone monooxyge 97.7 2.6E-05 9E-10 80.5 5.5 39 7-46 13-51 (542)
153 2q0l_A TRXR, thioredoxin reduc 97.7 2E-05 6.7E-10 75.2 4.3 33 11-44 2-35 (311)
154 4b63_A L-ornithine N5 monooxyg 97.7 3.8E-05 1.3E-09 78.4 6.6 58 214-273 148-212 (501)
155 2weu_A Tryptophan 5-halogenase 97.7 1.2E-05 4.2E-10 82.5 2.9 53 215-274 177-229 (511)
156 2qae_A Lipoamide, dihydrolipoy 97.7 2.1E-05 7.1E-10 79.8 4.4 59 224-285 228-288 (468)
157 3d1c_A Flavin-containing putat 97.7 2.2E-05 7.5E-10 76.8 4.4 34 10-44 4-38 (369)
158 2e4g_A Tryptophan halogenase; 97.7 2.3E-05 8E-10 81.1 4.8 35 9-44 24-61 (550)
159 2iid_A L-amino-acid oxidase; f 97.7 2.5E-05 8.4E-10 79.9 4.9 39 8-47 31-69 (498)
160 1ojt_A Surface protein; redox- 97.7 1.7E-05 5.7E-10 80.8 3.6 37 8-45 4-40 (482)
161 1fl2_A Alkyl hydroperoxide red 97.7 2.6E-05 8.9E-10 74.2 4.7 32 10-42 1-32 (310)
162 1v59_A Dihydrolipoamide dehydr 97.7 1.5E-05 5.1E-10 81.1 3.0 36 9-45 4-39 (478)
163 2a87_A TRXR, TR, thioredoxin r 97.7 2E-05 6.7E-10 76.1 3.7 35 8-43 12-46 (335)
164 1vdc_A NTR, NADPH dependent th 97.7 1.4E-05 4.9E-10 77.0 2.7 56 223-280 206-264 (333)
165 1onf_A GR, grase, glutathione 97.7 2.5E-05 8.6E-10 79.8 4.5 34 10-44 2-35 (500)
166 2yqu_A 2-oxoglutarate dehydrog 97.7 2.4E-05 8.2E-10 79.0 4.2 35 10-45 1-35 (455)
167 3c4a_A Probable tryptophan hyd 97.6 2.7E-05 9.2E-10 76.7 4.3 34 12-45 2-36 (381)
168 1dxl_A Dihydrolipoamide dehydr 97.6 2.4E-05 8E-10 79.4 3.9 38 8-46 4-41 (470)
169 2pyx_A Tryptophan halogenase; 97.6 2.7E-05 9.3E-10 80.1 4.4 53 215-274 179-232 (526)
170 1zmd_A Dihydrolipoyl dehydroge 97.6 2.5E-05 8.5E-10 79.3 4.0 37 8-45 4-40 (474)
171 4gut_A Lysine-specific histone 97.6 3.2E-05 1.1E-09 82.7 4.6 39 8-47 334-372 (776)
172 1vg0_A RAB proteins geranylger 97.6 4.3E-05 1.5E-09 79.1 5.3 41 7-48 5-45 (650)
173 2a8x_A Dihydrolipoyl dehydroge 97.6 3.2E-05 1.1E-09 78.3 4.2 65 216-285 217-283 (464)
174 1fec_A Trypanothione reductase 97.6 2.9E-05 9.9E-10 79.1 3.8 63 216-285 236-300 (490)
175 1ebd_A E3BD, dihydrolipoamide 97.6 3E-05 1E-09 78.3 3.8 34 9-43 2-35 (455)
176 3k30_A Histamine dehydrogenase 97.6 4.6E-05 1.6E-09 81.1 5.3 39 7-46 388-426 (690)
177 2wpf_A Trypanothione reductase 97.6 2.7E-05 9.1E-10 79.5 3.1 63 216-285 240-304 (495)
178 1pn0_A Phenol 2-monooxygenase; 97.6 3.7E-05 1.3E-09 81.2 4.3 35 9-44 7-46 (665)
179 1lvl_A Dihydrolipoamide dehydr 97.5 3.5E-05 1.2E-09 77.8 3.6 35 9-44 4-38 (458)
180 1b37_A Protein (polyamine oxid 97.5 4.8E-05 1.7E-09 77.2 4.6 37 9-46 3-40 (472)
181 2vdc_G Glutamate synthase [NAD 97.5 6.2E-05 2.1E-09 75.7 4.9 38 8-46 120-157 (456)
182 1xdi_A RV3303C-LPDA; reductase 97.5 4.7E-05 1.6E-09 77.8 3.5 35 10-44 2-38 (499)
183 2x8g_A Thioredoxin glutathione 97.5 6.4E-05 2.2E-09 78.7 4.4 35 8-43 105-139 (598)
184 2v3a_A Rubredoxin reductase; a 97.4 9.1E-05 3.1E-09 72.9 5.1 63 215-285 191-253 (384)
185 1hyu_A AHPF, alkyl hydroperoxi 97.4 8.3E-05 2.8E-09 76.3 4.6 35 7-42 209-243 (521)
186 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00017 5.7E-09 76.5 6.2 39 7-46 370-408 (671)
187 2z3y_A Lysine-specific histone 97.4 0.00013 4.6E-09 77.0 5.4 39 8-47 105-143 (662)
188 1m6i_A Programmed cell death p 97.3 0.0001 3.4E-09 75.2 4.0 63 216-286 231-293 (493)
189 2bc0_A NADH oxidase; flavoprot 97.3 0.00012 3.9E-09 74.7 4.4 35 10-45 35-72 (490)
190 1xhc_A NADH oxidase /nitrite r 97.3 0.00015 5.1E-09 70.8 4.9 59 215-286 187-245 (367)
191 1o94_A Tmadh, trimethylamine d 97.3 0.00016 5.5E-09 77.3 5.5 39 7-46 386-424 (729)
192 2xag_A Lysine-specific histone 97.3 0.0002 6.9E-09 77.1 6.0 39 8-47 276-314 (852)
193 2cdu_A NADPH oxidase; flavoenz 97.3 0.00012 4E-09 73.9 3.8 58 216-281 196-253 (452)
194 3oc4_A Oxidoreductase, pyridin 97.3 0.00014 4.8E-09 73.2 4.0 36 11-46 3-39 (452)
195 3kd9_A Coenzyme A disulfide re 97.2 0.00017 5.8E-09 72.6 4.3 62 215-286 194-255 (449)
196 3h28_A Sulfide-quinone reducta 97.2 0.0002 6.9E-09 71.6 4.6 35 11-46 3-39 (430)
197 2gqw_A Ferredoxin reductase; f 97.2 0.00016 5.3E-09 71.8 3.8 59 216-286 192-250 (408)
198 1y56_A Hypothetical protein PH 97.2 0.00018 6E-09 73.3 3.8 57 223-286 268-324 (493)
199 3sx6_A Sulfide-quinone reducta 97.2 0.00021 7.2E-09 71.6 4.3 35 10-45 4-41 (437)
200 3h8l_A NADH oxidase; membrane 97.2 0.00018 6.1E-09 71.4 3.7 34 12-46 3-39 (409)
201 2gag_A Heterotetrameric sarcos 97.2 0.00021 7.1E-09 78.8 4.5 61 223-284 327-392 (965)
202 2v3a_A Rubredoxin reductase; a 97.2 0.0021 7.1E-08 63.1 11.2 33 11-44 146-178 (384)
203 3ics_A Coenzyme A-disulfide re 97.2 0.00024 8.1E-09 74.2 4.4 61 216-286 233-293 (588)
204 1fl2_A Alkyl hydroperoxide red 97.1 0.0044 1.5E-07 58.5 12.5 55 224-280 192-247 (310)
205 3ab1_A Ferredoxin--NADP reduct 97.1 0.0024 8.2E-08 61.9 10.7 32 12-44 165-196 (360)
206 1nhp_A NADH peroxidase; oxidor 97.1 0.00025 8.6E-09 71.3 3.8 36 11-46 1-37 (447)
207 3cty_A Thioredoxin reductase; 97.1 0.002 6.8E-08 61.3 9.9 60 224-285 202-262 (319)
208 3cgb_A Pyridine nucleotide-dis 97.0 0.00039 1.3E-08 70.5 4.6 61 216-285 232-292 (480)
209 1cjc_A Protein (adrenodoxin re 97.0 0.00037 1.3E-08 70.1 4.2 37 9-46 5-43 (460)
210 2eq6_A Pyruvate dehydrogenase 97.0 0.0025 8.4E-08 64.3 10.2 33 11-44 170-202 (464)
211 1gte_A Dihydropyrimidine dehyd 96.9 0.0005 1.7E-08 76.3 4.8 61 223-285 381-454 (1025)
212 3s5w_A L-ornithine 5-monooxyge 96.9 0.0029 9.9E-08 63.7 10.0 51 223-276 327-378 (463)
213 2q0l_A TRXR, thioredoxin reduc 96.9 0.0061 2.1E-07 57.6 11.1 58 224-283 191-249 (311)
214 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00041 1.4E-08 72.8 3.0 36 10-46 56-100 (721)
215 1lqt_A FPRA; NADP+ derivative, 96.8 0.00048 1.6E-08 69.3 3.2 37 10-46 3-45 (456)
216 1vdc_A NTR, NADPH dependent th 96.8 0.01 3.6E-07 56.6 12.5 33 11-44 160-192 (333)
217 2gqw_A Ferredoxin reductase; f 96.8 0.0041 1.4E-07 61.5 9.8 33 11-44 146-178 (408)
218 3ntd_A FAD-dependent pyridine 96.8 0.00065 2.2E-08 70.5 4.1 36 11-46 2-38 (565)
219 1v59_A Dihydrolipoamide dehydr 96.8 0.0065 2.2E-07 61.5 11.0 33 11-44 184-216 (478)
220 3vrd_B FCCB subunit, flavocyto 96.7 0.00087 3E-08 66.2 4.1 62 216-286 207-268 (401)
221 1hyu_A AHPF, alkyl hydroperoxi 96.7 0.0096 3.3E-07 60.9 11.4 54 225-280 404-458 (521)
222 2q7v_A Thioredoxin reductase; 96.7 0.016 5.5E-07 55.0 12.4 32 12-44 154-185 (325)
223 2hqm_A GR, grase, glutathione 96.6 0.0022 7.4E-08 65.0 6.4 32 12-44 187-218 (479)
224 1zmd_A Dihydrolipoyl dehydroge 96.6 0.012 4E-07 59.5 11.7 33 11-44 179-211 (474)
225 3ic9_A Dihydrolipoamide dehydr 96.6 0.012 4.3E-07 59.6 11.9 33 11-44 175-207 (492)
226 4g6h_A Rotenone-insensitive NA 96.6 0.0016 5.4E-08 66.3 4.9 36 9-45 41-76 (502)
227 2zbw_A Thioredoxin reductase; 96.6 0.019 6.6E-07 54.7 12.2 59 223-284 202-261 (335)
228 3klj_A NAD(FAD)-dependent dehy 96.5 0.0023 7.8E-08 62.8 5.6 37 9-46 8-44 (385)
229 2qae_A Lipoamide, dihydrolipoy 96.5 0.022 7.6E-07 57.3 13.0 33 11-44 175-207 (468)
230 2cdu_A NADPH oxidase; flavoenz 96.5 0.0066 2.2E-07 60.9 8.9 32 12-44 151-182 (452)
231 2a8x_A Dihydrolipoyl dehydroge 96.5 0.012 4.1E-07 59.2 10.8 33 11-44 172-204 (464)
232 4eqs_A Coenzyme A disulfide re 96.5 0.0013 4.3E-08 65.9 3.3 59 216-286 193-251 (437)
233 3uox_A Otemo; baeyer-villiger 96.4 0.015 5.2E-07 59.6 11.1 34 11-45 186-219 (545)
234 3urh_A Dihydrolipoyl dehydroge 96.4 0.011 3.8E-07 60.0 9.9 32 12-44 200-231 (491)
235 3gwf_A Cyclohexanone monooxyge 96.4 0.019 6.4E-07 58.9 11.5 34 11-45 179-212 (540)
236 1m6i_A Programmed cell death p 96.3 0.013 4.6E-07 59.3 9.5 33 12-44 182-217 (493)
237 3oc4_A Oxidoreductase, pyridin 96.2 0.026 9E-07 56.5 11.4 32 12-44 149-180 (452)
238 3ics_A Coenzyme A-disulfide re 96.1 0.014 4.9E-07 60.6 8.9 32 12-44 189-220 (588)
239 1xdi_A RV3303C-LPDA; reductase 96.0 0.019 6.4E-07 58.4 9.0 33 11-44 183-215 (499)
240 3lzw_A Ferredoxin--NADP reduct 96.0 0.028 9.6E-07 53.4 9.8 59 224-285 201-260 (332)
241 3lad_A Dihydrolipoamide dehydr 96.0 0.037 1.3E-06 55.8 11.1 52 223-278 232-283 (476)
242 3ntd_A FAD-dependent pyridine 95.9 0.037 1.3E-06 57.2 11.2 32 12-44 153-184 (565)
243 4dna_A Probable glutathione re 95.9 0.013 4.4E-07 59.0 7.1 33 11-44 171-203 (463)
244 3dgz_A Thioredoxin reductase 2 95.8 0.034 1.1E-06 56.3 10.0 32 12-44 187-218 (488)
245 3dgh_A TRXR-1, thioredoxin red 95.8 0.032 1.1E-06 56.4 9.7 31 12-43 189-219 (483)
246 1fec_A Trypanothione reductase 95.5 0.02 6.9E-07 58.0 6.8 34 11-44 188-223 (490)
247 2wpf_A Trypanothione reductase 95.4 0.022 7.6E-07 57.8 6.9 33 12-44 193-227 (495)
248 1gte_A Dihydropyrimidine dehyd 95.3 0.061 2.1E-06 59.6 10.5 32 12-44 334-366 (1025)
249 4gcm_A TRXR, thioredoxin reduc 94.6 0.033 1.1E-06 52.5 5.4 33 12-45 147-179 (312)
250 1nhp_A NADH peroxidase; oxidor 94.6 0.023 7.9E-07 56.8 4.4 35 9-44 148-182 (447)
251 2g1u_A Hypothetical protein TM 94.4 0.037 1.3E-06 46.2 4.6 34 10-44 19-52 (155)
252 3fwz_A Inner membrane protein 94.4 0.039 1.3E-06 45.2 4.5 33 11-44 8-40 (140)
253 3klj_A NAD(FAD)-dependent dehy 94.3 0.028 9.4E-07 55.0 4.0 34 12-46 148-181 (385)
254 3llv_A Exopolyphosphatase-rela 94.1 0.04 1.4E-06 45.1 3.9 32 12-44 8-39 (141)
255 1lss_A TRK system potassium up 94.0 0.044 1.5E-06 44.5 4.1 32 12-44 6-37 (140)
256 4a5l_A Thioredoxin reductase; 93.9 0.058 2E-06 50.7 5.3 33 11-44 153-185 (314)
257 3k30_A Histamine dehydrogenase 93.8 0.21 7.1E-06 52.9 9.8 32 12-44 525-558 (690)
258 1xhc_A NADH oxidase /nitrite r 93.7 0.048 1.6E-06 52.9 4.4 35 11-46 144-178 (367)
259 1lvl_A Dihydrolipoamide dehydr 93.7 0.043 1.5E-06 55.0 4.1 34 11-45 172-205 (458)
260 2yqu_A 2-oxoglutarate dehydrog 93.6 0.057 2E-06 54.0 4.8 34 11-45 168-201 (455)
261 1ebd_A E3BD, dihydrolipoamide 93.5 0.054 1.8E-06 54.2 4.6 34 11-45 171-204 (455)
262 1id1_A Putative potassium chan 93.3 0.064 2.2E-06 44.6 3.9 31 12-43 5-35 (153)
263 3ic5_A Putative saccharopine d 93.0 0.065 2.2E-06 42.0 3.4 33 11-44 6-39 (118)
264 1ges_A Glutathione reductase; 92.9 0.078 2.7E-06 53.0 4.6 32 12-44 169-200 (450)
265 3cgb_A Pyridine nucleotide-dis 92.4 0.073 2.5E-06 53.7 3.7 36 10-46 186-221 (480)
266 2r9z_A Glutathione amide reduc 92.2 0.12 4E-06 51.9 4.8 33 12-45 168-200 (463)
267 2bc0_A NADH oxidase; flavoprot 92.2 0.11 3.7E-06 52.5 4.6 34 11-45 195-228 (490)
268 2hmt_A YUAA protein; RCK, KTN, 92.1 0.093 3.2E-06 42.7 3.4 32 12-44 8-39 (144)
269 3i83_A 2-dehydropantoate 2-red 92.1 0.12 4.2E-06 48.9 4.5 32 12-44 4-35 (320)
270 3d1c_A Flavin-containing putat 91.8 0.12 4.2E-06 49.8 4.3 33 12-45 168-200 (369)
271 3ado_A Lambda-crystallin; L-gu 91.8 0.12 4.2E-06 48.5 4.2 32 12-44 8-39 (319)
272 1q1r_A Putidaredoxin reductase 91.8 0.14 4.8E-06 50.7 4.8 35 11-46 150-184 (431)
273 1onf_A GR, grase, glutathione 91.7 0.16 5.5E-06 51.4 5.3 33 12-45 178-210 (500)
274 3hn2_A 2-dehydropantoate 2-red 91.7 0.13 4.4E-06 48.5 4.1 32 12-44 4-35 (312)
275 3ef6_A Toluene 1,2-dioxygenase 91.6 0.15 5.2E-06 50.1 4.8 35 11-46 144-178 (410)
276 1ojt_A Surface protein; redox- 91.6 0.12 4.1E-06 52.1 4.0 34 11-45 186-219 (482)
277 2gv8_A Monooxygenase; FMO, FAD 91.5 0.16 5.5E-06 50.6 4.9 34 11-45 213-247 (447)
278 4eqs_A Coenzyme A disulfide re 91.4 0.13 4.4E-06 51.2 4.0 34 12-46 149-182 (437)
279 3kd9_A Coenzyme A disulfide re 91.3 0.15 5.3E-06 50.7 4.6 34 12-46 150-183 (449)
280 2a87_A TRXR, TR, thioredoxin r 91.1 0.22 7.6E-06 47.3 5.3 54 224-280 203-257 (335)
281 3l4b_C TRKA K+ channel protien 91.1 0.11 3.9E-06 46.0 3.0 31 13-44 3-33 (218)
282 1trb_A Thioredoxin reductase; 90.9 0.24 8.1E-06 46.6 5.3 35 11-46 146-180 (320)
283 1f0y_A HCDH, L-3-hydroxyacyl-C 90.8 0.23 7.9E-06 46.5 5.0 32 12-44 17-48 (302)
284 1dxl_A Dihydrolipoamide dehydr 90.8 0.12 4.2E-06 51.8 3.3 34 11-45 178-211 (470)
285 4e12_A Diketoreductase; oxidor 90.8 0.17 5.9E-06 46.9 4.0 32 12-44 6-37 (283)
286 2cul_A Glucose-inhibited divis 90.8 0.2 6.8E-06 44.8 4.3 52 215-274 72-124 (232)
287 1zk7_A HGII, reductase, mercur 90.7 0.21 7.2E-06 50.0 4.8 33 12-45 178-210 (467)
288 2raf_A Putative dinucleotide-b 90.6 0.25 8.4E-06 43.5 4.7 34 11-45 20-53 (209)
289 2xve_A Flavin-containing monoo 90.4 0.17 5.7E-06 50.7 3.9 32 12-44 199-230 (464)
290 3dfz_A SIRC, precorrin-2 dehyd 90.4 0.23 7.9E-06 44.0 4.3 33 10-43 31-63 (223)
291 1ks9_A KPA reductase;, 2-dehyd 90.3 0.24 8.1E-06 46.0 4.6 31 13-44 3-33 (291)
292 3ghy_A Ketopantoate reductase 90.2 0.2 6.9E-06 47.7 4.1 32 12-44 5-36 (335)
293 4ap3_A Steroid monooxygenase; 90.2 0.17 5.9E-06 51.8 3.8 33 12-45 193-225 (549)
294 1pzg_A LDH, lactate dehydrogen 90.2 0.27 9.2E-06 46.7 4.8 33 11-44 10-43 (331)
295 3itj_A Thioredoxin reductase 1 90.2 0.3 1E-05 46.2 5.3 35 11-46 174-208 (338)
296 3fg2_P Putative rubredoxin red 90.1 0.26 8.8E-06 48.3 4.8 34 12-46 144-177 (404)
297 3lxd_A FAD-dependent pyridine 89.8 0.26 8.8E-06 48.5 4.6 35 11-46 153-187 (415)
298 3l8k_A Dihydrolipoyl dehydroge 89.8 0.27 9.3E-06 49.2 4.8 34 11-45 173-206 (466)
299 1jw9_B Molybdopterin biosynthe 89.8 0.22 7.6E-06 45.1 3.8 34 11-45 32-66 (249)
300 3ego_A Probable 2-dehydropanto 89.8 0.31 1E-05 45.8 4.8 31 12-44 4-34 (307)
301 3g17_A Similar to 2-dehydropan 89.7 0.15 5.2E-06 47.6 2.7 32 12-44 4-35 (294)
302 3dk9_A Grase, GR, glutathione 89.6 0.28 9.4E-06 49.3 4.7 33 12-45 189-221 (478)
303 1lld_A L-lactate dehydrogenase 89.3 0.3 1E-05 46.1 4.5 32 12-44 9-42 (319)
304 2x8g_A Thioredoxin glutathione 89.3 0.24 8.3E-06 51.4 4.1 31 12-43 288-318 (598)
305 2y0c_A BCEC, UDP-glucose dehyd 89.3 0.28 9.5E-06 49.2 4.4 33 11-44 9-41 (478)
306 1kyq_A Met8P, siroheme biosynt 89.3 0.21 7E-06 45.8 3.1 34 10-44 13-46 (274)
307 3oj0_A Glutr, glutamyl-tRNA re 88.8 0.24 8.2E-06 40.5 3.0 32 12-44 23-54 (144)
308 2ew2_A 2-dehydropantoate 2-red 88.8 0.33 1.1E-05 45.5 4.4 32 12-44 5-36 (316)
309 2dpo_A L-gulonate 3-dehydrogen 88.8 0.32 1.1E-05 45.9 4.2 32 12-44 8-39 (319)
310 4g65_A TRK system potassium up 88.7 0.25 8.4E-06 49.4 3.4 32 12-44 5-36 (461)
311 1mo9_A ORF3; nucleotide bindin 88.2 0.4 1.4E-05 48.8 4.8 35 11-46 215-249 (523)
312 1zcj_A Peroxisomal bifunctiona 88.2 0.42 1.4E-05 47.7 4.8 32 12-44 39-70 (463)
313 1zej_A HBD-9, 3-hydroxyacyl-CO 88.2 0.41 1.4E-05 44.5 4.4 33 10-44 12-44 (293)
314 3hwr_A 2-dehydropantoate 2-red 88.2 0.37 1.3E-05 45.5 4.2 30 12-43 21-50 (318)
315 3k6j_A Protein F01G10.3, confi 88.1 0.38 1.3E-05 47.6 4.4 32 12-44 56-87 (460)
316 3vtf_A UDP-glucose 6-dehydroge 87.9 0.39 1.3E-05 47.3 4.2 35 9-44 20-54 (444)
317 3k96_A Glycerol-3-phosphate de 87.8 0.4 1.4E-05 46.0 4.2 33 11-44 30-62 (356)
318 3c85_A Putative glutathione-re 87.7 0.33 1.1E-05 41.5 3.3 32 12-44 41-73 (183)
319 3fbs_A Oxidoreductase; structu 87.7 0.47 1.6E-05 43.8 4.6 32 11-44 142-173 (297)
320 4b1b_A TRXR, thioredoxin reduc 87.7 0.3 1E-05 49.8 3.5 32 12-44 225-256 (542)
321 3gg2_A Sugar dehydrogenase, UD 87.6 0.42 1.4E-05 47.5 4.4 32 12-44 4-35 (450)
322 3r9u_A Thioredoxin reductase; 87.5 0.58 2E-05 43.6 5.2 35 11-46 148-182 (315)
323 3f8d_A Thioredoxin reductase ( 87.3 0.43 1.5E-05 44.6 4.1 35 11-46 155-189 (323)
324 3qfa_A Thioredoxin reductase 1 87.2 0.4 1.4E-05 48.7 4.0 31 12-43 212-242 (519)
325 1t2d_A LDH-P, L-lactate dehydr 87.1 0.59 2E-05 44.1 4.9 32 12-44 6-38 (322)
326 1mv8_A GMD, GDP-mannose 6-dehy 87.1 0.44 1.5E-05 47.2 4.2 31 13-44 3-33 (436)
327 1bg6_A N-(1-D-carboxylethyl)-L 87.1 0.48 1.6E-05 45.4 4.4 32 12-44 6-37 (359)
328 1d5t_A Guanine nucleotide diss 87.0 0.21 7.1E-06 49.5 1.7 45 223-274 245-289 (433)
329 1z82_A Glycerol-3-phosphate de 86.9 0.52 1.8E-05 44.8 4.4 34 10-44 14-47 (335)
330 4dio_A NAD(P) transhydrogenase 86.9 0.56 1.9E-05 45.5 4.6 33 11-44 191-223 (405)
331 1vg0_A RAB proteins geranylger 86.9 0.42 1.4E-05 49.5 3.9 51 215-272 382-434 (650)
332 3l9w_A Glutathione-regulated p 86.8 0.39 1.3E-05 47.1 3.5 33 12-45 6-38 (413)
333 2v6b_A L-LDH, L-lactate dehydr 86.8 0.53 1.8E-05 44.0 4.4 31 13-44 3-35 (304)
334 1jay_A Coenzyme F420H2:NADP+ o 86.8 0.61 2.1E-05 40.9 4.5 31 13-44 3-34 (212)
335 2ewd_A Lactate dehydrogenase,; 86.8 0.54 1.9E-05 44.3 4.4 32 12-44 6-38 (317)
336 1cjc_A Protein (adrenodoxin re 86.7 0.62 2.1E-05 46.5 5.0 54 223-277 268-335 (460)
337 4a7p_A UDP-glucose dehydrogena 86.6 0.59 2E-05 46.3 4.7 35 10-45 8-42 (446)
338 1txg_A Glycerol-3-phosphate de 86.6 0.42 1.4E-05 45.4 3.6 29 13-42 3-31 (335)
339 3rui_A Ubiquitin-like modifier 86.5 0.59 2E-05 44.2 4.4 35 10-45 34-69 (340)
340 3lk7_A UDP-N-acetylmuramoylala 86.4 0.5 1.7E-05 47.0 4.2 33 11-44 10-42 (451)
341 3g79_A NDP-N-acetyl-D-galactos 86.4 0.59 2E-05 46.7 4.6 34 12-45 20-54 (478)
342 3o0h_A Glutathione reductase; 86.4 0.56 1.9E-05 47.1 4.6 35 11-46 192-226 (484)
343 1nyt_A Shikimate 5-dehydrogena 86.4 0.59 2E-05 42.9 4.4 32 12-44 121-152 (271)
344 2hjr_A Malate dehydrogenase; m 86.3 0.62 2.1E-05 44.1 4.6 33 11-44 15-48 (328)
345 1evy_A Glycerol-3-phosphate de 86.2 0.51 1.8E-05 45.5 4.1 32 12-44 17-48 (366)
346 4a9w_A Monooxygenase; baeyer-v 86.2 0.67 2.3E-05 44.0 4.9 32 11-44 164-195 (357)
347 2vdc_G Glutamate synthase [NAD 86.2 0.53 1.8E-05 46.9 4.2 33 11-44 265-298 (456)
348 3qha_A Putative oxidoreductase 86.0 0.67 2.3E-05 43.1 4.6 34 11-45 16-49 (296)
349 3dtt_A NADP oxidoreductase; st 85.8 0.55 1.9E-05 42.3 3.8 33 11-44 20-52 (245)
350 3pef_A 6-phosphogluconate dehy 85.8 0.66 2.3E-05 42.9 4.4 32 12-44 3-34 (287)
351 3doj_A AT3G25530, dehydrogenas 85.6 0.67 2.3E-05 43.5 4.4 33 11-44 22-54 (310)
352 2bcg_G Secretory pathway GDP d 85.5 0.48 1.6E-05 47.2 3.5 46 223-274 253-299 (453)
353 3c7a_A Octopine dehydrogenase; 85.5 0.65 2.2E-05 45.4 4.4 29 12-41 4-33 (404)
354 2aef_A Calcium-gated potassium 85.4 0.48 1.6E-05 42.4 3.2 32 11-44 10-41 (234)
355 2a9f_A Putative malic enzyme ( 85.4 0.51 1.7E-05 45.3 3.4 35 9-44 187-222 (398)
356 2pv7_A T-protein [includes: ch 85.3 0.79 2.7E-05 42.7 4.7 32 12-44 23-55 (298)
357 1vl6_A Malate oxidoreductase; 85.2 0.52 1.8E-05 45.2 3.4 35 9-44 191-226 (388)
358 2vns_A Metalloreductase steap3 85.2 0.69 2.3E-05 40.8 4.0 33 11-44 29-61 (215)
359 2x5o_A UDP-N-acetylmuramoylala 85.2 0.5 1.7E-05 46.8 3.4 33 12-45 7-39 (439)
360 3p2y_A Alanine dehydrogenase/p 85.1 0.58 2E-05 45.0 3.7 33 11-44 185-217 (381)
361 3phh_A Shikimate dehydrogenase 85.1 0.88 3E-05 41.5 4.7 34 11-45 119-152 (269)
362 3g0o_A 3-hydroxyisobutyrate de 85.0 0.65 2.2E-05 43.4 4.0 33 11-44 8-40 (303)
363 4dll_A 2-hydroxy-3-oxopropiona 85.0 0.77 2.6E-05 43.3 4.5 33 11-44 32-64 (320)
364 1zud_1 Adenylyltransferase THI 84.9 0.76 2.6E-05 41.6 4.3 34 11-45 29-63 (251)
365 3mog_A Probable 3-hydroxybutyr 84.9 0.66 2.3E-05 46.5 4.2 32 12-44 7-38 (483)
366 3h8v_A Ubiquitin-like modifier 84.7 0.65 2.2E-05 43.0 3.7 35 10-45 36-71 (292)
367 4ezb_A Uncharacterized conserv 84.3 0.91 3.1E-05 42.7 4.7 32 12-44 26-58 (317)
368 2egg_A AROE, shikimate 5-dehyd 84.3 0.98 3.4E-05 42.0 4.8 32 12-44 143-175 (297)
369 3tl2_A Malate dehydrogenase; c 84.1 0.86 2.9E-05 42.8 4.3 31 12-43 10-41 (315)
370 3ojo_A CAP5O; rossmann fold, c 84.1 0.67 2.3E-05 45.6 3.7 34 11-45 12-45 (431)
371 3l6d_A Putative oxidoreductase 83.9 1 3.6E-05 42.1 4.9 34 10-44 9-42 (306)
372 1x13_A NAD(P) transhydrogenase 83.9 0.86 2.9E-05 44.4 4.4 33 11-44 173-205 (401)
373 1nvt_A Shikimate 5'-dehydrogen 83.8 1 3.4E-05 41.7 4.7 31 12-44 130-160 (287)
374 2h78_A Hibadh, 3-hydroxyisobut 83.8 0.75 2.6E-05 42.9 3.8 32 12-44 5-36 (302)
375 3ond_A Adenosylhomocysteinase; 83.8 0.87 3E-05 45.2 4.4 32 12-44 267-298 (488)
376 2o3j_A UDP-glucose 6-dehydroge 83.7 0.92 3.1E-05 45.5 4.6 33 12-44 11-44 (481)
377 3nks_A Protoporphyrinogen oxid 83.6 0.48 1.6E-05 47.4 2.5 56 217-280 240-295 (477)
378 1a5z_A L-lactate dehydrogenase 83.6 0.73 2.5E-05 43.4 3.7 31 13-44 3-35 (319)
379 3pdu_A 3-hydroxyisobutyrate de 83.5 0.67 2.3E-05 42.9 3.3 32 12-44 3-34 (287)
380 1edz_A 5,10-methylenetetrahydr 83.5 1.5 5.3E-05 40.9 5.7 34 10-44 177-211 (320)
381 4g6h_A Rotenone-insensitive NA 83.4 0.64 2.2E-05 47.0 3.4 34 12-45 219-265 (502)
382 1guz_A Malate dehydrogenase; o 83.3 1.1 3.7E-05 42.1 4.7 32 13-44 3-35 (310)
383 4huj_A Uncharacterized protein 83.2 0.54 1.9E-05 41.6 2.5 32 12-44 25-57 (220)
384 1o94_A Tmadh, trimethylamine d 83.1 0.71 2.4E-05 49.1 3.7 32 12-44 530-563 (729)
385 2f1k_A Prephenate dehydrogenas 83.0 1 3.5E-05 41.4 4.4 31 13-44 3-33 (279)
386 1hyh_A L-hicdh, L-2-hydroxyiso 83.0 0.8 2.7E-05 42.9 3.7 32 12-44 3-36 (309)
387 2eez_A Alanine dehydrogenase; 82.9 0.91 3.1E-05 43.8 4.1 33 11-44 167-199 (369)
388 1pjc_A Protein (L-alanine dehy 82.9 0.92 3.2E-05 43.6 4.1 33 11-44 168-200 (361)
389 1yj8_A Glycerol-3-phosphate de 82.8 0.67 2.3E-05 44.8 3.1 33 12-45 23-62 (375)
390 2uyy_A N-PAC protein; long-cha 82.8 0.97 3.3E-05 42.4 4.2 33 11-44 31-63 (316)
391 1k0i_A P-hydroxybenzoate hydro 82.7 1.3 4.5E-05 42.9 5.2 50 224-276 115-164 (394)
392 3vh1_A Ubiquitin-like modifier 82.7 1.2 4E-05 45.4 4.9 34 11-45 328-362 (598)
393 1p77_A Shikimate 5-dehydrogena 82.6 0.72 2.5E-05 42.3 3.1 32 12-44 121-152 (272)
394 2wtb_A MFP2, fatty acid multif 82.6 1 3.5E-05 47.7 4.6 32 12-44 314-345 (725)
395 1x0v_A GPD-C, GPDH-C, glycerol 82.4 0.64 2.2E-05 44.5 2.8 33 12-45 10-49 (354)
396 1l7d_A Nicotinamide nucleotide 82.3 1.2 3.9E-05 43.3 4.6 33 11-44 173-205 (384)
397 1ur5_A Malate dehydrogenase; o 82.3 1.2 4.2E-05 41.7 4.6 32 12-44 4-36 (309)
398 1yqg_A Pyrroline-5-carboxylate 82.3 0.91 3.1E-05 41.3 3.7 31 13-44 3-34 (263)
399 3ggo_A Prephenate dehydrogenas 82.2 1.1 3.8E-05 42.0 4.3 32 12-44 35-68 (314)
400 4gsl_A Ubiquitin-like modifier 82.1 1.1 3.8E-05 45.6 4.4 35 10-45 326-361 (615)
401 3gpi_A NAD-dependent epimerase 81.8 1.1 3.8E-05 41.2 4.1 32 13-45 6-37 (286)
402 3ius_A Uncharacterized conserv 81.7 1.2 4E-05 41.0 4.3 32 12-44 7-38 (286)
403 1leh_A Leucine dehydrogenase; 81.6 1.2 4.2E-05 42.6 4.4 33 11-44 174-206 (364)
404 2gf2_A Hibadh, 3-hydroxyisobut 81.6 1.2 3.9E-05 41.4 4.2 31 13-44 3-33 (296)
405 3ew7_A LMO0794 protein; Q8Y8U8 81.6 1.3 4.4E-05 38.7 4.3 31 13-44 3-34 (221)
406 3jyo_A Quinate/shikimate dehyd 81.6 1.3 4.4E-05 40.9 4.4 33 11-44 128-161 (283)
407 3don_A Shikimate dehydrogenase 81.4 1.2 4.1E-05 40.9 4.1 33 11-44 118-151 (277)
408 3iwa_A FAD-dependent pyridine 81.2 0.91 3.1E-05 45.4 3.5 36 11-46 160-195 (472)
409 2zyd_A 6-phosphogluconate dehy 81.2 1.3 4.5E-05 44.3 4.7 33 11-44 16-48 (480)
410 2g5c_A Prephenate dehydrogenas 81.2 1.3 4.4E-05 40.7 4.3 31 13-44 4-36 (281)
411 1vpd_A Tartronate semialdehyde 81.1 1.2 4.1E-05 41.3 4.2 32 12-44 7-38 (299)
412 3qsg_A NAD-binding phosphogluc 81.0 1 3.5E-05 42.2 3.6 32 11-43 25-57 (312)
413 3c24_A Putative oxidoreductase 81.0 1.6 5.6E-05 40.2 5.0 32 12-44 13-45 (286)
414 3tnl_A Shikimate dehydrogenase 80.9 1.3 4.3E-05 41.6 4.1 32 11-43 155-187 (315)
415 2weu_A Tryptophan 5-halogenase 80.8 1.3 4.5E-05 44.7 4.6 35 10-45 2-39 (511)
416 2vhw_A Alanine dehydrogenase; 80.8 1.2 4.2E-05 43.0 4.1 33 11-44 169-201 (377)
417 3gvi_A Malate dehydrogenase; N 80.7 1.5 5.2E-05 41.2 4.6 32 12-44 9-41 (324)
418 3dfu_A Uncharacterized protein 80.7 0.52 1.8E-05 42.0 1.3 30 12-42 8-37 (232)
419 3h5n_A MCCB protein; ubiquitin 80.6 1 3.6E-05 43.0 3.5 34 11-45 119-153 (353)
420 4e21_A 6-phosphogluconate dehy 80.5 1.4 4.7E-05 42.2 4.4 33 11-44 23-55 (358)
421 1hdo_A Biliverdin IX beta redu 80.5 1.4 4.7E-05 38.0 4.1 31 13-44 6-37 (206)
422 2ywl_A Thioredoxin reductase r 80.5 1.3 4.6E-05 37.3 3.9 59 215-285 60-118 (180)
423 3ktd_A Prephenate dehydrogenas 80.4 1.2 4E-05 42.4 3.8 32 12-44 10-41 (341)
424 3k31_A Enoyl-(acyl-carrier-pro 80.3 1.9 6.4E-05 40.0 5.2 32 12-44 32-66 (296)
425 3e8x_A Putative NAD-dependent 80.3 1.4 4.8E-05 39.2 4.1 32 12-44 23-55 (236)
426 3eag_A UDP-N-acetylmuramate:L- 80.3 1.3 4.6E-05 41.7 4.2 33 12-45 6-39 (326)
427 1dlj_A UDP-glucose dehydrogena 80.3 1.5 5.3E-05 42.7 4.7 30 13-44 3-32 (402)
428 2e4g_A Tryptophan halogenase; 80.2 0.99 3.4E-05 46.2 3.5 53 215-274 198-251 (550)
429 2pgd_A 6-phosphogluconate dehy 80.2 1.4 4.7E-05 44.2 4.5 32 12-44 4-35 (482)
430 1lqt_A FPRA; NADP+ derivative, 80.2 1.7 5.9E-05 43.2 5.1 51 224-277 264-328 (456)
431 3dqp_A Oxidoreductase YLBE; al 80.2 1.6 5.6E-05 38.2 4.5 31 13-44 3-34 (219)
432 1w4x_A Phenylacetone monooxyge 80.0 1.1 3.8E-05 45.7 3.8 33 12-45 188-220 (542)
433 3h2s_A Putative NADH-flavin re 80.0 1.5 5.1E-05 38.5 4.2 31 13-44 3-34 (224)
434 2hk9_A Shikimate dehydrogenase 79.9 1.2 4.2E-05 40.8 3.7 32 12-44 131-162 (275)
435 1lu9_A Methylene tetrahydromet 79.8 1.4 4.8E-05 40.7 4.1 32 12-44 121-153 (287)
436 1pgj_A 6PGDH, 6-PGDH, 6-phosph 79.8 1.4 4.6E-05 44.2 4.2 32 12-44 3-34 (478)
437 3pwz_A Shikimate dehydrogenase 79.8 1.6 5.5E-05 39.9 4.4 33 11-44 121-154 (272)
438 3pid_A UDP-glucose 6-dehydroge 79.8 1.5 5.1E-05 43.0 4.4 32 11-44 37-68 (432)
439 3o8q_A Shikimate 5-dehydrogena 79.7 1.7 6E-05 39.9 4.6 33 11-44 127-160 (281)
440 3zwc_A Peroxisomal bifunctiona 79.7 1.6 5.4E-05 46.1 4.8 33 11-44 317-349 (742)
441 3u62_A Shikimate dehydrogenase 79.6 1.4 4.9E-05 39.8 3.9 32 12-44 110-142 (253)
442 1pjq_A CYSG, siroheme synthase 79.4 1.4 4.7E-05 43.9 4.1 32 11-43 13-44 (457)
443 3p7m_A Malate dehydrogenase; p 79.3 1.8 6.1E-05 40.7 4.6 32 12-44 7-39 (321)
444 2gag_A Heterotetrameric sarcos 79.3 0.91 3.1E-05 49.9 3.0 34 12-46 286-319 (965)
445 2p4q_A 6-phosphogluconate dehy 79.3 1.6 5.6E-05 43.8 4.6 34 10-44 10-43 (497)
446 1i36_A Conserved hypothetical 79.3 1.3 4.6E-05 40.2 3.7 29 13-42 3-31 (264)
447 3pqe_A L-LDH, L-lactate dehydr 79.2 1.3 4.5E-05 41.7 3.7 32 12-44 7-40 (326)
448 3d4o_A Dipicolinate synthase s 79.1 1.5 5.3E-05 40.6 4.1 33 11-44 156-188 (293)
449 3fbt_A Chorismate mutase and s 79.0 1.5 5.1E-05 40.3 3.9 33 11-44 123-156 (282)
450 3cky_A 2-hydroxymethyl glutara 79.0 1.6 5.5E-05 40.5 4.2 32 12-44 6-37 (301)
451 2rcy_A Pyrroline carboxylate r 78.9 1.3 4.5E-05 40.1 3.5 32 12-44 6-41 (262)
452 1oju_A MDH, malate dehydrogena 78.9 1.4 4.7E-05 40.9 3.6 31 13-44 3-35 (294)
453 2izz_A Pyrroline-5-carboxylate 78.5 1.6 5.4E-05 41.2 4.0 32 12-44 24-59 (322)
454 1y8q_A Ubiquitin-like 1 activa 78.5 1.3 4.6E-05 42.1 3.5 35 10-45 36-71 (346)
455 2rir_A Dipicolinate synthase, 78.5 1.7 5.7E-05 40.5 4.1 33 11-44 158-190 (300)
456 1wdk_A Fatty oxidation complex 78.4 1.2 4.2E-05 47.0 3.5 32 12-44 316-347 (715)
457 3ldh_A Lactate dehydrogenase; 78.3 1.4 4.9E-05 41.4 3.6 33 11-44 22-56 (330)
458 3o38_A Short chain dehydrogena 78.2 1.3 4.4E-05 40.3 3.2 32 12-44 24-57 (266)
459 4aj2_A L-lactate dehydrogenase 77.9 1.9 6.6E-05 40.6 4.4 34 10-44 19-54 (331)
460 2d5c_A AROE, shikimate 5-dehyd 77.9 1.8 6.2E-05 39.3 4.2 32 12-44 118-149 (263)
461 3t4e_A Quinate/shikimate dehyd 77.8 1.8 6.2E-05 40.4 4.1 32 11-43 149-181 (312)
462 2i6t_A Ubiquitin-conjugating e 77.7 1.6 5.5E-05 40.7 3.7 33 11-44 15-49 (303)
463 1y6j_A L-lactate dehydrogenase 77.7 2 6.8E-05 40.4 4.4 33 11-44 8-42 (318)
464 4gwg_A 6-phosphogluconate dehy 77.5 2.1 7.3E-05 42.6 4.8 33 11-44 5-37 (484)
465 3gt0_A Pyrroline-5-carboxylate 77.4 1.7 5.7E-05 39.1 3.7 32 12-44 4-39 (247)
466 2ahr_A Putative pyrroline carb 77.4 2.3 8E-05 38.4 4.8 32 12-44 5-36 (259)
467 4gx0_A TRKA domain protein; me 77.3 1.8 6.1E-05 44.4 4.4 34 11-45 349-382 (565)
468 1np3_A Ketol-acid reductoisome 77.3 2 6.7E-05 40.8 4.3 32 12-44 18-49 (338)
469 2dkn_A 3-alpha-hydroxysteroid 77.3 2 7E-05 38.4 4.3 31 13-44 4-35 (255)
470 3dhn_A NAD-dependent epimerase 77.2 2.1 7E-05 37.7 4.2 32 12-44 6-38 (227)
471 1tt5_B Ubiquitin-activating en 76.8 1.7 5.7E-05 42.8 3.7 35 10-45 40-75 (434)
472 3r6d_A NAD-dependent epimerase 76.8 2.1 7.1E-05 37.5 4.1 31 13-44 8-40 (221)
473 3qvo_A NMRA family protein; st 76.7 2.2 7.4E-05 37.9 4.2 32 12-44 25-58 (236)
474 3nep_X Malate dehydrogenase; h 76.6 1.9 6.4E-05 40.4 3.9 31 13-44 3-35 (314)
475 3d1l_A Putative NADP oxidoredu 76.5 1.7 5.6E-05 39.6 3.5 32 12-44 12-44 (266)
476 2pd4_A Enoyl-[acyl-carrier-pro 76.1 2.6 8.7E-05 38.5 4.7 31 13-44 9-42 (275)
477 4a26_A Putative C-1-tetrahydro 76.1 2.2 7.6E-05 39.3 4.1 33 10-43 165-198 (300)
478 2iz1_A 6-phosphogluconate dehy 76.1 2 6.9E-05 42.9 4.2 33 11-44 6-38 (474)
479 1npy_A Hypothetical shikimate 76.0 2.1 7E-05 39.2 3.9 33 11-44 120-153 (271)
480 3vku_A L-LDH, L-lactate dehydr 75.9 2.1 7.2E-05 40.3 4.0 34 10-44 9-44 (326)
481 3gvp_A Adenosylhomocysteinase 75.9 2.1 7E-05 41.8 4.0 33 11-44 221-253 (435)
482 3ce6_A Adenosylhomocysteinase; 75.8 2 6.8E-05 42.9 4.0 32 12-44 276-307 (494)
483 1c1d_A L-phenylalanine dehydro 75.7 2.4 8.2E-05 40.3 4.4 32 11-43 176-207 (355)
484 2yjz_A Metalloreductase steap4 77.6 0.56 1.9E-05 40.9 0.0 32 12-44 21-52 (201)
485 1ff9_A Saccharopine reductase; 75.6 2.3 7.8E-05 42.1 4.4 32 12-44 5-36 (450)
486 4ffl_A PYLC; amino acid, biosy 75.5 2.4 8.2E-05 40.6 4.5 32 13-45 4-35 (363)
487 2dbq_A Glyoxylate reductase; D 75.4 2.6 8.9E-05 39.9 4.6 33 11-44 151-183 (334)
488 2cvz_A Dehydrogenase, 3-hydrox 75.4 2.6 8.8E-05 38.7 4.5 30 13-44 4-33 (289)
489 2aqj_A Tryptophan halogenase, 75.4 1.9 6.5E-05 43.9 3.9 54 215-275 169-222 (538)
490 2ivd_A PPO, PPOX, protoporphyr 75.3 1.8 6E-05 43.2 3.6 50 226-280 249-299 (478)
491 2qyt_A 2-dehydropantoate 2-red 75.3 1.7 5.7E-05 40.7 3.2 31 12-42 10-45 (317)
492 1b37_A Protein (polyamine oxid 75.3 1.5 5.3E-05 43.6 3.2 41 226-273 228-268 (472)
493 3tri_A Pyrroline-5-carboxylate 75.1 2.4 8.4E-05 38.9 4.2 32 12-44 5-39 (280)
494 1ldn_A L-lactate dehydrogenase 75.1 2.5 8.5E-05 39.7 4.3 33 11-44 7-41 (316)
495 2axq_A Saccharopine dehydrogen 74.9 2.2 7.6E-05 42.4 4.1 33 12-44 25-57 (467)
496 3vps_A TUNA, NAD-dependent epi 74.9 2.5 8.5E-05 39.4 4.3 33 12-45 9-42 (321)
497 2dvm_A Malic enzyme, 439AA lon 74.8 1.9 6.5E-05 42.3 3.5 30 11-41 187-219 (439)
498 2vvm_A Monoamine oxidase N; FA 74.4 2.4 8.3E-05 42.5 4.4 49 223-278 266-315 (495)
499 2q3e_A UDP-glucose 6-dehydroge 74.3 2 6.8E-05 42.8 3.6 33 12-44 7-40 (467)
500 1yb4_A Tartronic semialdehyde 74.0 1.8 6.3E-05 39.9 3.1 31 12-44 5-35 (295)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=1.2e-84 Score=672.23 Aligned_cols=483 Identities=29% Similarity=0.380 Sum_probs=405.1
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC--CCCCccCCccccccC-CccccceecccccCcccCCCCceee
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT--PIHSRIPGMSSVLSL-SEFDHAYLAEPSQFAGLGVRNARIK 86 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (512)
+|||||||+|.+||++|.+|++.++.+|||||+|+.. .....+|..+..... +.++|.|.+.|++ .+.++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~----~~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQA----GYNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCG----GGTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCC----CCCCceEe
Confidence 6999999999999999999999669999999999875 233445665555553 6799999999987 47889999
Q ss_pred eecCcccchhhhhcCceeecCChhhHHHHHHc-CCCCCChhhHHHHHHHhccCcCCCc------CCCCCCCCCCCceeec
Q psy1059 87 ITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGYDETLKYFVKSEDYRSVIY------NESKAVHGTQGYLPVG 159 (512)
Q Consensus 87 ~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~~~-g~~~w~~~~l~~~~~~~e~~~~~~~------~~~~~~~~~~g~~~~~ 159 (512)
|.+|++|||+|.+|+++|.|+++.||+.|++. |+++|+|+++.|||+++|++..+.. ..+...|+..|++.+.
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999988 9999999999999999999874421 1134678999999999
Q ss_pred cCCCCCcchHHHHHHHHHHHc--CCCCCCCCCCCCcccceeecccccCCCeecchhhhhhhcccCCCCCEEEEcCcEEEE
Q psy1059 160 LFKNKENNIIREIFETSAQEL--GYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTK 237 (512)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~--G~~~~~~~~~~~~~~g~~~~~~~~~~~~r~~~~~~~l~~~~~~~~g~~v~~~~~V~~ 237 (512)
...+. .+....+.++++++ |++...++++.. ..|++.++.++.++.|.++..+||.++. +++|++|++++.|++
T Consensus 158 ~~~~~--~~~~~~~~~a~~~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~g~R~sa~~ayL~p~~-~r~NL~Vlt~a~V~r 233 (566)
T 3fim_B 158 LPGFP--TPLDDRVLATTQEQSEEFFFNPDMGTGH-PLGISWSIASVGNGQRSSSSTAYLRPAQ-SRPNLSVLINAQVTK 233 (566)
T ss_dssp SCSSC--CTHHHHHHHHHHHTHHHHCBCSCGGGSC-CCEEEECCBSEETTEECCHHHHTHHHHT-TCTTEEEESSCEEEE
T ss_pred cCCCC--CHHHHHHHHHHHHHhcCCCccCCCCCCC-cceEEeeeeecCCCEEcCHHHHHhhhhc-cCCCeEEECCCEEEE
Confidence 88777 78999999999999 999887888877 8899888888889999999999999988 899999999999999
Q ss_pred EEec---CC-CeEEEEEEEecCC-eEEEEecCcEEEEcCCchhcHHHHHHcCCCChhhhccCCCCcccccc-cccccccc
Q psy1059 238 VIIN---DQ-NVATGVEYVNSKG-ETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENLKLN 311 (512)
Q Consensus 238 i~~~---~~-~~v~GV~~~~~~g-~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig~~~~l~~~gi~~~~~~~-vG~~l~dh 311 (512)
|+++ ++ ++++||++.+.+| +.++++|+|+||||||+|+||+||++|||||+++|+++||+++.++| ||+||+||
T Consensus 234 Il~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH 313 (566)
T 3fim_B 234 LVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDH 313 (566)
T ss_dssp EECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCC
T ss_pred EEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcC
Confidence 9997 23 6999999997445 77889998899999999999999999999999999999999999999 99999999
Q ss_pred cCCCcceEEecCCccc-----cc-ccHHHHHHHhhcCCCCCCCcccceEEEEEecCC-------------CCCCCCeEEE
Q psy1059 312 AQFTGPVMAFSAPLKR-----TV-YSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQ-------------NTARPDLEIH 372 (512)
Q Consensus 312 ~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------------~~~~p~~~~~ 372 (512)
+.+. +.+..+..... .. .......+|...+.||++..+ ....+|++... ....|++++.
T Consensus 314 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~ 391 (566)
T 3fim_B 314 LLLP-AAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALI-ANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETI 391 (566)
T ss_dssp EEEC-CEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCS-CSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEE
T ss_pred ccce-EEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccCh-hhheeeeccccchhhhhhhccccccCCCCCEEEE
Confidence 9985 88877654211 11 123456789999999997653 45677876542 1245777665
Q ss_pred Eecc-------------------------cc-------------chhhHHH------HHHHHHHHHHHHHHhcchhHHHh
Q psy1059 373 LLYF-------------------------QQ-------------NDIRNMY------LATLIRGTDYITRLEQTEAIRLA 408 (512)
Q Consensus 373 ~~~~-------------------------~~-------------~~~~~~y------~~~~~~~~~~~~~~~~~~~~~~~ 408 (512)
+.+. ++ +.++.+| ++.++++++.+++++++++++.+
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 471 (566)
T 3fim_B 392 FSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWADF 471 (566)
T ss_dssp EESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGTTT
T ss_pred ecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccCCc
Confidence 4310 00 1122223 88999999999999998888877
Q ss_pred cccccccCCccCCCCCCCCHHHHHHHHHhhcCCCccccccccccCCCCCCCccCCCCeEeccCCcEEEeeccCCCCCCCC
Q psy1059 409 GGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQ 488 (512)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~Mg~~~~~~~VvD~~~rv~g~~nl~V~D~Sv~P~~~~~n 488 (512)
...+.. |++ ....+|++|++|+|....+.+|++|||+||++++.++|||+++||||++||||||+||||+++++|
T Consensus 472 ~~~~~~---P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n 546 (566)
T 3fim_B 472 VIRPFD---PRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILPFAPNAH 546 (566)
T ss_dssp EEEESS---GGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECSGGGCCSCCSSC
T ss_pred cccccC---CCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcccccCCCCCCcC
Confidence 644432 221 346789999999999999999999999999988655999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHhh
Q psy1059 489 SDAISYMIGEKCADLVKTS 507 (512)
Q Consensus 489 p~lTi~ala~r~a~~i~~~ 507 (512)
|++|+||+|+|+||.|+++
T Consensus 547 ~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 547 TQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp THHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999986
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=7.3e-82 Score=652.08 Aligned_cols=483 Identities=26% Similarity=0.314 Sum_probs=382.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC---CCCccCCccccccCCccccceecccccCcccCCCCc
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP---IHSRIPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNA 83 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (512)
.+++|||||||+|.+||++|.+|+|.++.+|||||+|+... .....|..+.....+.++|.|.+.|+. +.++
T Consensus 16 ~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r 90 (583)
T 3qvp_A 16 SGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQ 90 (583)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSC
T ss_pred CCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCC
Confidence 45689999999999999999999987799999999998321 122334444455567899999999885 4678
Q ss_pred eeeeecCcccchhhhhcCceeecCChhhHHHHHHcCCC-CCChhhHHHHHHHhccCcCCCc-------CCCCCCCCCCCc
Q psy1059 84 RIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYN-GWGYDETLKYFVKSEDYRSVIY-------NESKAVHGTQGY 155 (512)
Q Consensus 84 ~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~~~g~~-~w~~~~l~~~~~~~e~~~~~~~-------~~~~~~~~~~g~ 155 (512)
.+.|.+|++|||+|.+|+++|.|+++.||+.|++.++. +|+|+++.|||+++|++..+.. ..+...|+..||
T Consensus 91 ~~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gp 170 (583)
T 3qvp_A 91 TALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGT 170 (583)
T ss_dssp CCEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSS
T ss_pred eeeccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCC
Confidence 88999999999999999999999999999999999888 9999999999999999864321 123567999999
Q ss_pred eeeccC---CCCCcchHHHHHHHHHHHcCCCCCCCCCCCCcccceeecccccC-CCeecchhhhhhhcccCCCCCEEEEc
Q psy1059 156 LPVGLF---KNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTR-YGLRFSAADAYLTPIAGKRTNLYVLK 231 (512)
Q Consensus 156 ~~~~~~---~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~~~~-~~~r~~~~~~~l~~~~~~~~g~~v~~ 231 (512)
+.+... ... .+..+.+.++++++|++...++++.. ..|+..++.++. .+.|.++..+||.+++ +++|++|++
T Consensus 171 l~v~~~~~~~~~--~~~~~~~~~a~~~~G~~~~~D~n~~~-~~G~~~~~~t~~~~g~R~saa~ayL~p~~-~r~NL~V~t 246 (583)
T 3qvp_A 171 VHAGPRDTGDDY--SPIVKALMSAVEDRGVPTKKDFGCGD-PHGVSMFPNTLHEDQVRSDAAREWLLPNY-QRPNLQVLT 246 (583)
T ss_dssp EEEBCCCCSSCB--CTHHHHHHHHHHTTTCCBCCCTTSSC-CCEEECCCBSBCTTCBBCCHHHHHTTTTT-TCTTEEEEC
T ss_pred EEecCCCCcccC--CHHHHHHHHHHHHcCCCcCCCCCCCC-CceecccceeEcCCCcEecHHHHHHHHhh-cCCCcEEEc
Confidence 998765 223 57889999999999999888899888 888888777664 6889999999999988 899999999
Q ss_pred CcEEEEEEecC---CCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCCChhhhccCCCCccccccccccc
Q psy1059 232 RSKVTKVIIND---QNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLRVGENL 308 (512)
Q Consensus 232 ~~~V~~i~~~~---~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig~~~~l~~~gi~~~~~~~vG~~l 308 (512)
++.|++|++++ +++++||++.+.+|+.++++|+|+||||||+|+||+||++|||||+++|+++||+++.++|||+||
T Consensus 247 ~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLPVG~NL 326 (583)
T 3qvp_A 247 GQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLNL 326 (583)
T ss_dssp SCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTCCB
T ss_pred CCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCccccch
Confidence 99999999972 579999999854788899999989999999999999999999999999999999999999999999
Q ss_pred ccccCCCcceEEecCCcc--------cc---cc--cHHHHHHHh----------------------------------hc
Q psy1059 309 KLNAQFTGPVMAFSAPLK--------RT---VY--SQEMVFKYL----------------------------------VN 341 (512)
Q Consensus 309 ~dh~~~~~~~~~~~~~~~--------~~---~~--~~~~~~~~~----------------------------------~~ 341 (512)
+||+.+. +.+.++.... .. .. .......|+ ..
T Consensus 327 qDH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (583)
T 3qvp_A 327 QDQTTAT-VRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEEAVARGGFHNTTALLIQYENYRDWIVN 405 (583)
T ss_dssp BCCEEEE-EEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHH
T ss_pred hhCccce-EEEEecCCccccccccccccHHHhhccchHHHHHHHHhhcchhhcccccccCccccHHHHhhhccchhhhcc
Confidence 9999984 7777653200 00 00 000000010 00
Q ss_pred CCCCCC-----CcccceEEEEE-----------ecCCCCCCCCe-EEEEeccccchhhHHHHHHHHHHHHHHHHHhcchh
Q psy1059 342 RIGPLS-----NAGLWSFTGYI-----------DTLQNTARPDL-EIHLLYFQQNDIRNMYLATLIRGTDYITRLEQTEA 404 (512)
Q Consensus 342 ~~g~~~-----~~~~~~~~~~~-----------~~~~~~~~p~~-~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 404 (512)
...|+. ..+......+. ++....+.|.+ ...++..+. + ++.+++++|++++++++++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~---D---~~~~~~~~~~~~~i~~~~~ 479 (583)
T 3qvp_A 406 HNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNEL---D---LLGQAAATQLARNISNSGA 479 (583)
T ss_dssp SCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHH---H---HHHHHHHHHHHHHHHTSTT
T ss_pred CCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHH---H---HHHHHHHHHHHHHHHhCcc
Confidence 000100 00000011111 00011144555 555544332 2 8899999999999999988
Q ss_pred HHHhcccccccCCccCCCCCCCCHHHHHHHHHhhcCCCccccccccccCCCCCCCccCCCCeEeccCCcEEEeeccCCCC
Q psy1059 405 IRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNA 484 (512)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~Mg~~~~~~~VvD~~~rv~g~~nl~V~D~Sv~P~~ 484 (512)
++.+...+. .|++......+|++|++|+|....+.+|++||||||++++ ++|||++|||||++||||||+||||++
T Consensus 480 ~~~~~~~~~---~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv~~LrVvDaSv~P~~ 555 (583)
T 3qvp_A 480 MQTYFAGET---IPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEM-GGVVDNAARVYGVQGLRVIDGSIPPTQ 555 (583)
T ss_dssp HHHHEEEEE---ESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTCBSEEECSTTCCSSC
T ss_pred hhhcccccc---CCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCC-CceECCCCeEecCCCeEEeecccCCCC
Confidence 988765432 3444333457899999999999999999999999999865 699999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHhhcC
Q psy1059 485 IITQSDAISYMIGEKCADLVKTSYN 509 (512)
Q Consensus 485 ~~~np~lTi~ala~r~a~~i~~~~~ 509 (512)
+++||++|+||+|+|+||.|+++++
T Consensus 556 ~~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 556 MSSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp CSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999874
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=2.5e-79 Score=634.04 Aligned_cols=480 Identities=27% Similarity=0.406 Sum_probs=386.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC---CCCCccCCccccccCCccccceecccccCcccCCCCc
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT---PIHSRIPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNA 83 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (512)
..++|||||||+|.+||++|.+|++.++.+|||||+|+.. .....+|..+.....+.++|.|.+.. .++
T Consensus 3 ~~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~~--------~~r 74 (577)
T 3q9t_A 3 DGSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTTM--------VRR 74 (577)
T ss_dssp TTCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEEE--------EEE
T ss_pred CCCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEEE--------CCc
Confidence 3568999999999999999999999844799999999863 22334566666677778999998762 223
Q ss_pred eee------eecCcccchhhhhcCceeecCChhhHHHHHHcCCCCCChhhHHHHHHHhccCcCCCcC--CCCCCCCCCCc
Q psy1059 84 RIK------ITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLKYFVKSEDYRSVIYN--ESKAVHGTQGY 155 (512)
Q Consensus 84 ~~~------~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~~~g~~~w~~~~l~~~~~~~e~~~~~~~~--~~~~~~~~~g~ 155 (512)
... |.+|++|||+|.+|+++|.|+++.||+.|++.|+++|+|+++.|||++.|.+...... .+...|+..|+
T Consensus 75 ~~~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gp 154 (577)
T 3q9t_A 75 DDYERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGP 154 (577)
T ss_dssp TTEEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCS
T ss_pred cccccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCC
Confidence 333 8999999999999999999999999999999999999999999999999998643211 11336788999
Q ss_pred eeeccCCCC-CcchHHHHHHHHHHHcCCCCCCCCCCCCcccceeecccccCCCeecchhhhhhhcccCCCCCEEEEcCcE
Q psy1059 156 LPVGLFKNK-ENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSK 234 (512)
Q Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~~~~~~~r~~~~~~~l~~~~~~~~g~~v~~~~~ 234 (512)
+.+....+. ...++.+.+.+++++.|++...++++.. ..|+...+..+..+.|.++. .|+ . +++|++|++++.
T Consensus 155 l~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~g~R~s~~-~~l---~-~r~Nl~v~~~a~ 228 (577)
T 3q9t_A 155 IPISHAELIDEMAPFRENLTKAWKSMGQPLIENIYDGE-MDGLTHCCDTIYRGQRSGSF-LFV---K-NKPNITIVPEVH 228 (577)
T ss_dssp EEEEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSC-CCEEEECEESEETTEECCGG-GGS---S-SCTTEEEECSEE
T ss_pred EEeeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCCCC-cCeEEeecceecCCeEeeHH-HHH---h-cCCCeEEEcCcE
Confidence 998876543 1134778888999999999888888877 88888888788888888764 443 4 688999999999
Q ss_pred EEEEEec-CCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCCChhhhccCCCCcccccc-ccccccccc
Q psy1059 235 VTKVIIN-DQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENLKLNA 312 (512)
Q Consensus 235 V~~i~~~-~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig~~~~l~~~gi~~~~~~~-vG~~l~dh~ 312 (512)
|++|+++ ++++++||++.+.+|+.++++|+|+||||||+|+||+||++|||||+++|+++||+++.++| ||+||+||+
T Consensus 229 v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~ 308 (577)
T 3q9t_A 229 SKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHP 308 (577)
T ss_dssp EEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCE
T ss_pred EEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCc
Confidence 9999998 36799999999745888899998899999999999999999999999999999999999999 999999999
Q ss_pred CCCcceEEecCCc------ccc-cccHHHHHHHhhcCCCCCCCcccceEEEEEecC----------------------CC
Q psy1059 313 QFTGPVMAFSAPL------KRT-VYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTL----------------------QN 363 (512)
Q Consensus 313 ~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----------------------~~ 363 (512)
.+. +.+.++... ... ........+|...+.||++. +.....+|.+.. ..
T Consensus 309 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (577)
T 3q9t_A 309 GVP-FVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGS-GLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSP 386 (577)
T ss_dssp EEE-EEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGC-CSEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCT
T ss_pred cee-EEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCccc-chhheeEEeecChhhhcchhhhhhhhccccccccCC
Confidence 985 888776542 111 12334567888889999874 234555665421 11
Q ss_pred CCCCCeEEEEecc----------------------------cc--------------chhhHHH------HHHHHHHHHH
Q psy1059 364 TARPDLEIHLLYF----------------------------QQ--------------NDIRNMY------LATLIRGTDY 395 (512)
Q Consensus 364 ~~~p~~~~~~~~~----------------------------~~--------------~~~~~~y------~~~~~~~~~~ 395 (512)
+..|++++.+.+. ++ +.++.+| ++.++++++.
T Consensus 387 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~ 466 (577)
T 3q9t_A 387 LGQPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRF 466 (577)
T ss_dssp TSCCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHH
T ss_pred CCCceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHH
Confidence 2345555433210 00 1122223 8899999999
Q ss_pred HHHHh-cchhHHHhcccccccCCccCCCCCCCCHHHHHHHHHhhcCCCccccccccccCCCCCCCccCCCCeEeccCCcE
Q psy1059 396 ITRLE-QTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLR 474 (512)
Q Consensus 396 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~Mg~~~~~~~VvD~~~rv~g~~nl~ 474 (512)
+++++ ++++++.+...+.. | .....+|++|++|+|....+.+|++|||+||++++ ++|||++|||||++|||
T Consensus 467 ~~~i~~~~~~~~~~~~~e~~---p---~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv~~Lr 539 (577)
T 3q9t_A 467 SYDLLFKGEGFKDLVESEYP---W---EMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNID-QGVVDPKLKVHGIKKLR 539 (577)
T ss_dssp HHHHHHHSTTGGGTEEEEES---S---CCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTT-TCSBCTTCBBTTCBSEE
T ss_pred HHHHHHhChhhhhccccccC---C---CCCcCCHHHHHHHHHhccccccccccceecCCCCC-CceECCCCeEeCCCCcE
Confidence 99999 78888877654432 2 23467899999999999999999999999999875 69999999999999999
Q ss_pred EEeeccCCCCCCCCchHHHHHHHHHHHHHHHhhcC
Q psy1059 475 VADISVLPNAIITQSDAISYMIGEKCADLVKTSYN 509 (512)
Q Consensus 475 V~D~Sv~P~~~~~np~lTi~ala~r~a~~i~~~~~ 509 (512)
|||+||||+++++||++|+||+|+|+||.|+++++
T Consensus 540 VvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~~ 574 (577)
T 3q9t_A 540 VADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHK 574 (577)
T ss_dssp ECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHCT
T ss_pred EeecccccCCCCCccHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999875
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=4.7e-76 Score=614.98 Aligned_cols=482 Identities=25% Similarity=0.329 Sum_probs=373.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCCC--Cc-cCCccccccCCccccceecccccCcccCCCCce
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIH--SR-IPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNAR 84 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (512)
..+|||||||+|.+|+++|.+|++++|.+|+|||+|...... .. .|..+.....+.+.|.|.+.| .+.++.
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p------~~~~~~ 95 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP------LINNRT 95 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC------CTTSCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc------CCCCce
Confidence 357999999999999999999999339999999999865321 22 454444445566889998876 256788
Q ss_pred eeeecCcccchhhhhcCceeecCChhhHHHHHHc-CCCCCChhhHHHHHHHhccCcCCCc-------CCCCCCCCCCCce
Q psy1059 85 IKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL-GYNGWGYDETLKYFVKSEDYRSVIY-------NESKAVHGTQGYL 156 (512)
Q Consensus 85 ~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~~~-g~~~w~~~~l~~~~~~~e~~~~~~~-------~~~~~~~~~~g~~ 156 (512)
+.+.+|++|||+|.+|++++.|+++.||+.|+.. |+.+|+|++++|||+++|+++.+.. ..+...|+..||+
T Consensus 96 ~~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl 175 (587)
T 1gpe_A 96 NNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTV 175 (587)
T ss_dssp CEECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSE
T ss_pred eeeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCE
Confidence 8999999999999999999999999999999988 9999999999999999999886421 1135678889999
Q ss_pred eeccC---CCCCcchHHHHHHHHHHHcCCCCCCCCCCCCcccceeeccccc-CCCeecchhhhhhhcccCCCCCEEEEcC
Q psy1059 157 PVGLF---KNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMT-RYGLRFSAADAYLTPIAGKRTNLYVLKR 232 (512)
Q Consensus 157 ~~~~~---~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~~~-~~~~r~~~~~~~l~~~~~~~~g~~v~~~ 232 (512)
.+.+. ... .+..+.+.++++++|++...++++.. +.|++.++..+ ..+.|+++..+||.++. ++.|++|+++
T Consensus 176 ~v~~~~~~~~~--~~~~~~~~~a~~~~G~~~~~d~n~~~-~~G~~~~~~~~~~~g~R~sa~~~~l~~~~-~~~nl~i~~~ 251 (587)
T 1gpe_A 176 QSGARDNGQPW--SPIMKALMNTVSALGVPVQQDFLCGH-PRGVSMIMNNLDENQVRVDAARAWLLPNY-QRSNLEILTG 251 (587)
T ss_dssp EEBCCCCSSCB--CTHHHHHHHHHHHTTCCBSCCTTSSC-CCEEECCEESBCTTCCBCCHHHHHTTTTT-TCTTEEEEES
T ss_pred EEccCCCcCCC--CHHHHHHHHHHHHcCCCcCCCCCCCC-CCEEEecceEECCCCcccCHHHHHHHHhh-cCCCcEEEcC
Confidence 98754 233 68889999999999999887888877 78888877654 36899999989998877 7899999999
Q ss_pred cEEEEEEecC-C--CeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCCChhhhccCCCCcccccccccccc
Q psy1059 233 SKVTKVIIND-Q--NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLRVGENLK 309 (512)
Q Consensus 233 ~~V~~i~~~~-~--~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig~~~~l~~~gi~~~~~~~vG~~l~ 309 (512)
+.|++|++++ + ++++||++.+.+|+.++++|+|+||||||+++||+||++|||||+++|+++||+++.++|||+||+
T Consensus 252 ~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlPVG~nL~ 331 (587)
T 1gpe_A 252 QMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINMQ 331 (587)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCSBB
T ss_pred CEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCCCCcchh
Confidence 9999999972 2 599999998547888899996699999999999999999999999999999999999999999999
Q ss_pred cccCCCcceEEecCCc--cccc---------c--cHH--------HHHHHhhc--------------------------C
Q psy1059 310 LNAQFTGPVMAFSAPL--KRTV---------Y--SQE--------MVFKYLVN--------------------------R 342 (512)
Q Consensus 310 dh~~~~~~~~~~~~~~--~~~~---------~--~~~--------~~~~~~~~--------------------------~ 342 (512)
||+... +.+.++... .... + ... ....|... .
T Consensus 332 DH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (587)
T 1gpe_A 332 DQTTTT-VSSRASSAGAGQGQAVFFANFTETFGDYAPQARDLLNTKLDQWAEETVARGGFHNVTALKVQYENYRNWLLDE 410 (587)
T ss_dssp CCEEEE-EEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHSHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHHS
T ss_pred cCcccc-eEEEeCCCcccccchHHHHHHHHHHHhCCCCCccccccceeeEeecccccccccccccccccHHHHhhhccCC
Confidence 999984 777665331 0000 0 000 00001100 0
Q ss_pred CCCCC-----CcccceEEEEE---------ecCCC--CCCC-CeEEEEeccccchhhHHHHHHHHHHHHHHHHHhcchhH
Q psy1059 343 IGPLS-----NAGLWSFTGYI---------DTLQN--TARP-DLEIHLLYFQQNDIRNMYLATLIRGTDYITRLEQTEAI 405 (512)
Q Consensus 343 ~g~~~-----~~~~~~~~~~~---------~~~~~--~~~p-~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 405 (512)
.-|.. ..+.......+ ..... .+.| .+...+...+ .+ .+.+.++++.+++++++..+
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~---~D---~~~~~~~~~~~~~i~~~~~~ 484 (587)
T 1gpe_A 411 DVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNE---FD---LLGQAAASKLARDLTSQGAM 484 (587)
T ss_dssp CCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSH---HH---HHHHHHHHHHHHHHHTSTTH
T ss_pred CCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCCh---HH---HHHHHHHHHHHHHHHcCcch
Confidence 00000 00000010011 00000 1345 5444443322 22 88999999999999998888
Q ss_pred HHhcccccccCCccCCCCCCCCHHHHHHHHHhhcCCCccccccccccCCCCCCCccCCCCeEeccCCcEEEeeccCCCCC
Q psy1059 406 RLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAI 485 (512)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~Mg~~~~~~~VvD~~~rv~g~~nl~V~D~Sv~P~~~ 485 (512)
+.+...+. .|+.......++++|++|+|....+.+|++||||||+++ .+||||++|||||++||||||+||||+++
T Consensus 485 ~~~~~~~~---~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~-~~sVVD~~lrV~Gv~nLrVvDaSv~P~~~ 560 (587)
T 1gpe_A 485 KEYFAGET---LPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRE-LGGVVDATAKVYGTQGLRVIDGSIPPTQV 560 (587)
T ss_dssp HHHEEEEE---ESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGG-GTCSBCTTCBBTTCBSEEECSTTCCSSCC
T ss_pred hhhccccc---CCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCC-CCceECCCCEEECCCCcEEeeeccCCCCC
Confidence 87764332 222111234789999999999888999999999999987 46999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhhcCC
Q psy1059 486 ITQSDAISYMIGEKCADLVKTSYNI 510 (512)
Q Consensus 486 ~~np~lTi~ala~r~a~~i~~~~~~ 510 (512)
++||++|+||||+|+||+|+++++.
T Consensus 561 ~~Np~~ti~aiAeraAd~I~~~~~~ 585 (587)
T 1gpe_A 561 SSHVMTIFYGMALKVADAILDDYAK 585 (587)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999998754
No 5
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=8.4e-74 Score=596.94 Aligned_cols=469 Identities=27% Similarity=0.371 Sum_probs=358.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC-CCCccCCccccccCCccccceecccccCcccCCCCcee
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP-IHSRIPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNARI 85 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (512)
...+|||||||||++||++|.+|||.+|++|||||+|+... .....|..+..+..+.++|.|.+.|+. .+.++.+
T Consensus 14 ~~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~----~~~~~~~ 89 (526)
T 3t37_A 14 HAPNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQA----GTAGRAH 89 (526)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBG----GGTTBCC
T ss_pred CCCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccC----CCCCCeE
Confidence 34589999999999999999999996589999999998643 223456666667778899999999987 4778889
Q ss_pred eeecCcccchhhhhcCceeecCChhhHHHHHH-cCCCCCChhhHHHHHHHhccCcCCCcCCCCCCCCCCCceeeccCC-C
Q psy1059 86 KITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFK-N 163 (512)
Q Consensus 86 ~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~~-~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~g~~~~~~~~-~ 163 (512)
.|.+|++|||+|.+|++.+.|+.+.||+.|.+ .++.+|+|+++.|||+++|...... ...++..|+....... .
T Consensus 90 ~~~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~----~~~~~~~g~~~~~~~~~~ 165 (526)
T 3t37_A 90 HWARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGG----DGIHGKGGPLPIHLPADE 165 (526)
T ss_dssp EECCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTT----SSSSCSSCSEECBCCSTT
T ss_pred eccCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCC----ccccCcCCCcCccccccc
Confidence 99999999999999999999999999999976 5778999999999999999986543 4556667777665433 2
Q ss_pred CCcchHHHHHHHHHHHcCCCCCCCCCCCCcccceeecccccCCCeecchhhhhhhcccCCCCCEEEEcCcEEEEEEecCC
Q psy1059 164 KENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQ 243 (512)
Q Consensus 164 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~~~~~~~r~~~~~~~l~~~~~~~~g~~v~~~~~V~~i~~~~~ 243 (512)
. .++.+.+.+.+.+.|++...+.+... +.++..+...+..+.+.+....++.++...+.|++|++++.|++|+++ +
T Consensus 166 ~--~p~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~-~ 241 (526)
T 3t37_A 166 V--SPLARAFIEAGASLGLPRLEGHNSGE-MIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLE-G 241 (526)
T ss_dssp S--CHHHHHHHHHHHHTTCCBCSSSCSSC-CBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEE-T
T ss_pred C--CHHHHHHHHHHHHcCCCcccCCCCCc-ccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEec-C
Confidence 3 67889999999999998776777766 777777777788899999888888664326889999999999999999 9
Q ss_pred CeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCCChhhhccCCCCcccccc-cccccccccCCCcceEEec
Q psy1059 244 NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENLKLNAQFTGPVMAFS 322 (512)
Q Consensus 244 ~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig~~~~l~~~gi~~~~~~~-vG~~l~dh~~~~~~~~~~~ 322 (512)
++++||++.+ .++..++.|+ +||||||+++||+||++||||++..|...||+++.++| ||+||+||+...+..+...
T Consensus 242 ~~a~gv~~~~-~~~~~~~~a~-~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~ 319 (526)
T 3t37_A 242 NQVRSLEVVG-RQGSAEVFAD-QIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAAR 319 (526)
T ss_dssp TEEEEEEEEE-TTEEEEEEEE-EEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEES
T ss_pred CeEEEEEEEe-cCceEEEeec-ceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEecc
Confidence 9999999998 6777788896 89999999999999999999999999999999999999 9999999997642223322
Q ss_pred CCcc----ccc----c------cHHHHHHHhh--------cC--CCCCCCcccceEEEEE-ecC----------CCCCCC
Q psy1059 323 APLK----RTV----Y------SQEMVFKYLV--------NR--IGPLSNAGLWSFTGYI-DTL----------QNTARP 367 (512)
Q Consensus 323 ~~~~----~~~----~------~~~~~~~~~~--------~~--~g~~~~~~~~~~~~~~-~~~----------~~~~~p 367 (512)
.... ... + ......++.. .. ..|.... ...+...+ .+. .....|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~p~srG~v~~~s~dp~~~p 398 (526)
T 3t37_A 320 KPVPPSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAPIVSESFPAPAAGS-AYSLLFGITHPTSRGSVRISGPELGDRL 398 (526)
T ss_dssp SCCCCCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSCCCCTTSCCCCTTS-EEEEEEEESSCCCCBEEECSSSSTTSCC
T ss_pred CCcchHhhcchhhhhhhhcccccccCCcceeeecccccccccccccccCCc-ceeeeccccCccccCcceeccCCCccCc
Confidence 2210 000 0 0000000000 00 0000000 00111111 000 001223
Q ss_pred CeEEEEeccccchhhHHHHHHHHHHHHHHHHHhcchhHHHhcccccccCCccCCCCCCCCHHHHHHHHHhhcCCCccccc
Q psy1059 368 DLEIHLLYFQQNDIRNMYLATLIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVG 447 (512)
Q Consensus 368 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~G 447 (512)
.+...+... ..+ .+.+.++++.+++++.+..++.+...+. .|++ ..+++++++|++....+.+|++|
T Consensus 399 ~i~~~~~~~---~~d---~~~~~~~~~~~r~i~~~~~~~~~~~~~~---~pg~----~~~~~~~~~~ir~~~~t~~H~~G 465 (526)
T 3t37_A 399 IIDPAYLQT---GRD---RERFRRALEASRTIGHRDELAGWREREL---LPGT----PNSAAEMDDFIARSVITHHHPCG 465 (526)
T ss_dssp EEECCTTCS---HHH---HHHHHHHHHHHHHHHTCGGGTTTEEEEC---SSCC----CCSHHHHHHHHHHHEEECSCCBC
T ss_pred eeccccCCC---HHH---HHHHHHHHHHHHHHHcChhhhhcccccc---CCCC----CCCHHHHHHHHHhcCccCcccCc
Confidence 333222221 122 7789999999999998887776654433 2332 36789999999999899999999
Q ss_pred cccccCCCCCCCccCCCCeEeccCCcEEEeeccCCCCCCCCchHHHHHHHHHHHHHHH
Q psy1059 448 TVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVK 505 (512)
Q Consensus 448 t~~Mg~~~~~~~VvD~~~rv~g~~nl~V~D~Sv~P~~~~~np~lTi~ala~r~a~~i~ 505 (512)
|||||+|+ +||||++|||||++||||||+||||+++++||++||||||||+||+.-
T Consensus 466 TcrMG~d~--~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~ 521 (526)
T 3t37_A 466 TCRMGKDP--DAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYH 521 (526)
T ss_dssp TTCBCSST--TCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCC--CccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhh
Confidence 99999876 599999999999999999999999999999999999999999999864
No 6
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.2e-72 Score=585.43 Aligned_cols=480 Identities=27% Similarity=0.378 Sum_probs=366.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCC--CCccCCccccccCCccccceecccccCcccCCCCcee
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI--HSRIPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNARI 85 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (512)
..+|||||||+|.+|+++|.+|++++|.+|+|||+|+.... ....|..+.....+.+.|.|.+.|++. .++.+
T Consensus 11 ~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-----~~~~~ 85 (546)
T 2jbv_A 11 DREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-----GNSFM 85 (546)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-----SCTTC
T ss_pred cCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-----CCceE
Confidence 35799999999999999999999976899999999986532 123344333334556889999888762 56778
Q ss_pred eeecCcccchhhhhcCceeecCChhhHHHHHH-cCCCCCChhhHHHHHHHhccCcCCCcCCCCCCCCCCCceeeccCCCC
Q psy1059 86 KITAGKGLGGSSAVQNILYQRGTSYDYENFAK-LGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNK 164 (512)
Q Consensus 86 ~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~~-~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 164 (512)
.+.+|++|||+|.+|++.+.|+.+.||+.|++ +|+.+|+|++++|||+++|+...+.. +..+|+..|++.+......
T Consensus 86 ~~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~--~~~~~g~~Gpl~v~~~~~~ 163 (546)
T 2jbv_A 86 RHARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGP--DAPHHGDSGPVHLMNVPPK 163 (546)
T ss_dssp EECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBT--TBTTSCBSCSEEEEECCSC
T ss_pred EeecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCC--ccccCCCCCCEEEecCCCC
Confidence 99999999999999999999999999999998 88899999999999999999875321 1357788899988766555
Q ss_pred CcchHHHHHHHHHHHcCCCCCCCCCCCCc-ccceeecccccC-CCeecchhhhhhhcccCCCCCEEEEcCcEEEEEEecC
Q psy1059 165 ENNIIREIFETSAQELGYPCPKDMNDRYV-DVGFAELPGMTR-YGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIIND 242 (512)
Q Consensus 165 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-~~g~~~~~~~~~-~~~r~~~~~~~l~~~~~~~~g~~v~~~~~V~~i~~~~ 242 (512)
.+..+.+.++++++|++.. ++++... +.|+..|+..|. ++.|+++..+||.++. ++.|++|++++.|++|+++
T Consensus 164 --~~~~~~~~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~-~~~~~~i~~~~~V~~i~~~- 238 (546)
T 2jbv_A 164 --DPTGVALLDACEQAGIPRA-KFNTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIV-EQENFTLLTGLRARQLVFD- 238 (546)
T ss_dssp --CHHHHHHHHHHHHTTCCBC-CSSSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGT-TCTTEEEECSCEEEEEEEC-
T ss_pred --CHHHHHHHHHHHHCCCCcc-CCCCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHh-cCCCcEEEeCCEEEEEEEC-
Confidence 7888999999999999877 6665321 457778877787 8999999889998887 7899999999999999998
Q ss_pred C-CeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHHHHcCCCChhhhccCCCCcccccc-cccccccccCCCcceE
Q psy1059 243 Q-NVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENLKLNAQFTGPVM 319 (512)
Q Consensus 243 ~-~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig~~~~l~~~gi~~~~~~~-vG~~l~dh~~~~~~~~ 319 (512)
+ ++++||++.+. +|+..+++|+|+||||||+++||+||++|||||.++|++.||+++.++| ||+||+||+... +.+
T Consensus 239 ~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~-~~~ 317 (546)
T 2jbv_A 239 ADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGV-VQF 317 (546)
T ss_dssp TTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECC-EEE
T ss_pred CCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccce-EEE
Confidence 6 89999999872 2878889998789999999999999999999999999999999999999 999999999985 777
Q ss_pred EecCCccc---cc-----c-cHH---HHH--HHhhc---------CCCCCCCcccceEEEEE---------ecCC--CCC
Q psy1059 320 AFSAPLKR---TV-----Y-SQE---MVF--KYLVN---------RIGPLSNAGLWSFTGYI---------DTLQ--NTA 365 (512)
Q Consensus 320 ~~~~~~~~---~~-----~-~~~---~~~--~~~~~---------~~g~~~~~~~~~~~~~~---------~~~~--~~~ 365 (512)
.++..... .. + ... ... ++... ..|.........+...+ .... ..+
T Consensus 318 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~ 397 (546)
T 2jbv_A 318 EAKQPMVAESTQWWEIGIFTPTEDGLDRPDLMMHYGSVPFDMNTLRHGYPTTENGFSLTPNVTHARSRGTVRLRSRDFRD 397 (546)
T ss_dssp EESSCCCSCCSSSCCEEEEECSSTTCSSCSEEEEEESSCCCTTTGGGTCCCCSSEEEEEEEETTCCCCBEEECSSSCTTS
T ss_pred EecCCCcccccchhheEEEEecCCCCCCCceEEEeccccccccccccCccCCCCeEEEEEEEcccCcccEEEecCCCCCC
Confidence 66533100 00 0 000 000 00000 00000000011111111 1110 114
Q ss_pred CCCeEEEEeccccchhhHHHHHHHHHHHHHHHHHhcchhHHHhcccccccCCccCCCCCCCCHHHHHHHHHhhcCCCccc
Q psy1059 366 RPDLEIHLLYFQQNDIRNMYLATLIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNP 445 (512)
Q Consensus 366 ~p~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 445 (512)
.|.+.+.+...+.+ .+ .+.+.++++++++++++..++.+...+. .| +....++++|++|++....+.+|+
T Consensus 398 ~P~I~~~y~~~~~~-~D---~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~p---~~~~~sd~~~~~~ir~~~~~~~H~ 467 (546)
T 2jbv_A 398 KPMVDPRYFTDPEG-HD---MRVMVAGIRKAREIAAQPAMAEWTGREL---SP---GVEAQTDEELQDYIRKTHNTVYHP 467 (546)
T ss_dssp CCEEECCTTCCTTC-HH---HHHHHHHHHHHHHHHTSGGGTTTEEEEE---ES---CTTCCSHHHHHHHHHHHCEECSCC
T ss_pred CceecccccCCCch-hH---HHHHHHHHHHHHHHHcCcchhhcccccc---cC---CCCCCCHHHHHHHHHhcCCccccc
Confidence 45555555443320 02 8899999999999998877776653332 12 234678999999999998899999
Q ss_pred cccccccCCCCCCCccCCCCeEeccCCcEEEeeccCCCCCCCCchHHHHHHHHHHHHHHHhhcCC
Q psy1059 446 VGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSYNI 510 (512)
Q Consensus 446 ~Gt~~Mg~~~~~~~VvD~~~rv~g~~nl~V~D~Sv~P~~~~~np~lTi~ala~r~a~~i~~~~~~ 510 (512)
+||||||++.|.++|||++|||||++||||||+||||+++++||++|+||||+|+||+|++++.+
T Consensus 468 ~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~ 532 (546)
T 2jbv_A 468 VGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSARAG 532 (546)
T ss_dssp BCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC------
T ss_pred ccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhccc
Confidence 99999996434679999999999999999999999999999999999999999999999998764
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=7e-64 Score=518.58 Aligned_cols=447 Identities=24% Similarity=0.313 Sum_probs=308.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCC--CCccCCccccccCCccccceecccccCcccCCCCcee
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI--HSRIPGMSSVLSLSEFDHAYLAEPSQFAGLGVRNARI 85 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (512)
..+|||||||||.+||++|.+|++ |.+|||||+|+.... ....+..+...... ..| |.+.++.. ..++..
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~-~~~-~~t~~q~~----~~~~~~ 95 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQQ-EDD-GKTPVERF----VSEDGI 95 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHHS-CCC-SSSSEEEE----ECTTSC
T ss_pred cCcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhccC-CCc-CcCCCccc----cCCCcc
Confidence 457999999999999999999998 899999999986421 11112111111100 122 34444432 345667
Q ss_pred eeecCcccchhhhhcCceeecCChhhHHHHHHcCCCCCChhhHHHHHHHhccCcCCCcCCCCCCCCCCCceeeccCCCCC
Q psy1059 86 KITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKE 165 (512)
Q Consensus 86 ~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~~~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 165 (512)
.+.++++|||+|.+|++.+.|+.+.||+.+ | .+|.|+++.|||+++|+.+... +..
T Consensus 96 ~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~~-------------------~~~- 151 (536)
T 1ju2_A 96 DNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVYK-------------------PNS- 151 (536)
T ss_dssp EEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCBC-------------------CCC-
T ss_pred eeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCCC-------------------CCC-
Confidence 889999999999999999999999998631 2 2499999999999999754210 112
Q ss_pred cchHHHHHHHHHHHcCCCCCCCCCCCCcccceee-cccccCCCeecchhhhhhhcccCCCCCEEEEcCcEEEEEEecCC-
Q psy1059 166 NNIIREIFETSAQELGYPCPKDMNDRYVDVGFAE-LPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQ- 243 (512)
Q Consensus 166 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~g~~~-~~~~~~~~~r~~~~~~~l~~~~~~~~g~~v~~~~~V~~i~~~~~- 243 (512)
.+....+.+++.++|++......... ..|... ....+.++.|+++.. ++.. . ++.|++|++++.|++|+++++
T Consensus 152 -~~~~~~~~~a~~~~G~~~~~~~~~~~-~~g~~~g~~~~~~~g~r~s~~~-~~~~-~-~~~~~~v~~~~~v~~i~~~~~~ 226 (536)
T 1ju2_A 152 -QSWQSVTKTAFLEAGVHPNHGFSLDH-EEGTRITGSTFDNKGTRHAADE-LLNK-G-NSNNLRVGVHASVEKIIFSNAP 226 (536)
T ss_dssp -CHHHHHHHHHHHHTTCCCEEEECCBC-CSEEEECEESBCTTSBBCCGGG-GGGG-S-CTTTEEEEESCEEEEEEECCSS
T ss_pred -CcHHHHHHHHHHHcCCCCCCCcccCC-CCCceeeeEEECCCCeEecHHH-hhhh-h-cCCCcEEEeCCEEEEEEECCCC
Confidence 46777888889999874211111001 111111 001125677887764 6644 4 689999999999999999821
Q ss_pred -CeEEEEEEEecCCeEEEEe--cCcEEEEcCCchhcHHHHHHcCCCChhhhccCCCCcccccc-cccccccccCCCcceE
Q psy1059 244 -NVATGVEYVNSKGETVRVT--ANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGENLKLNAQFTGPVM 319 (512)
Q Consensus 244 -~~v~GV~~~~~~g~~~~v~--A~k~VVlaaGa~~t~~lL~~Sgig~~~~l~~~gi~~~~~~~-vG~~l~dh~~~~~~~~ 319 (512)
++++||++.+.+|+.++++ +.|+||||||+++||+||++|||||.++|++.||+++.++| ||+||+||+... +.+
T Consensus 227 ~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~-~~~ 305 (536)
T 1ju2_A 227 GLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNF-INI 305 (536)
T ss_dssp SCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEE-EEE
T ss_pred CCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCccee-EEE
Confidence 4999999987557765664 55689999999999999999999999999999999999999 999999999874 666
Q ss_pred EecCCccc---ccccHHHHHHHhhcCCCCCCC-----------------cccceEE---------EEEec-C--CCCCCC
Q psy1059 320 AFSAPLKR---TVYSQEMVFKYLVNRIGPLSN-----------------AGLWSFT---------GYIDT-L--QNTARP 367 (512)
Q Consensus 320 ~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~-----------------~~~~~~~---------~~~~~-~--~~~~~p 367 (512)
.++..... ...... ..|.....|++.. ....... +.+.. . +..+.|
T Consensus 306 ~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P 383 (536)
T 1ju2_A 306 LPPNPIEPTIVTVLGIS--NDFYQCSFSSLPFTTPPFGFFPSSSYPLPNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSP 383 (536)
T ss_dssp CCSSCCCCCCCCEEEEC--SSEEEEEEEECCCSSCCBTTBSSSCCCCCSSCEEEEEEEESSCSCCEEEECSCSSCTTSCC
T ss_pred EeCCCcccccchhhhHH--HHHHHcCCCCCCCChhhheeecCcccCCCCcceEEEeeecCCCCcceEEEeCCCCCcccCc
Confidence 55533110 000000 0122211121110 0000001 11111 1 111334
Q ss_pred CeEEEEeccccchhhHHHHHHHHHHHHHHHHHhcchhHHHhcccccccCCccCCC------CCCCCHHHHHHHHHhhcCC
Q psy1059 368 DLEIHLLYFQQNDIRNMYLATLIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQ------YPWRSTHSWTCYIRHLTTT 441 (512)
Q Consensus 368 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 441 (512)
.+.+.+...+ .+ .+.+.++++.+++++++..++.+...+.. +.|++.. ....++++|++|+|....+
T Consensus 384 ~i~~~y~~~~---~D---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t 456 (536)
T 1ju2_A 384 NVKFNYYSNL---TD---LSHCVSGMKKIGELLSTDALKPYKVEDLP-GVEGFNILGIPLPKDQTDDAAFETFCRESVAS 456 (536)
T ss_dssp EECCCTTCSH---HH---HHHHHHHHHHHHHHHTSGGGGGGCSSCCS-TTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEE
T ss_pred eecccccCCc---cH---HHHHHHHHHHHHHHHcCccchhhhccccc-cCCCccccccCCCcccCCHHHHHHHHHhccCc
Confidence 4444443322 22 88999999999999998888876543310 1222110 0245889999999999899
Q ss_pred CccccccccccCCCCCCCccCCCCeEeccCCcEEEeeccCCCCCCCCchHHHHHHHHHHHHHHHhh
Q psy1059 442 TSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTS 507 (512)
Q Consensus 442 ~~H~~Gt~~Mg~~~~~~~VvD~~~rv~g~~nl~V~D~Sv~P~~~~~np~lTi~ala~r~a~~i~~~ 507 (512)
.+|++|||+|| +|||++|||||++||||||+||||+++++||++|+||+|+|+|+.|+++
T Consensus 457 ~~H~~GTcrMG------~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~ 516 (536)
T 1ju2_A 457 YWHYHGGCLVG------KVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQE 516 (536)
T ss_dssp CSCCEESSCBT------TTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred cccCcCccCCc------cEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 99999999999 6999999999999999999999999999999999999999988887654
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=8.4e-62 Score=506.92 Aligned_cols=463 Identities=21% Similarity=0.263 Sum_probs=316.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCCCC--cc-CCccccccCCccccc-----eecccccCccc
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHS--RI-PGMSSVLSLSEFDHA-----YLAEPSQFAGL 78 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~~~--~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 78 (512)
.+.+|||||||||++|+++|.+|+++ |++|+|||+|+...... .. +.+........+.+. ....+..
T Consensus 4 ~~~~~D~iIvG~G~aG~~~A~~L~~~-g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---- 78 (546)
T 1kdg_A 4 SATPYDYIIVGAGPGGIIAADRLSEA-GKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNP---- 78 (546)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCC----
T ss_pred CCCceeEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCCCc----
Confidence 35689999999999999999999998 99999999998542100 00 000000000000000 0000000
Q ss_pred CCCCceeeeecCcccchhhhhcCceeecCChhhHHH---HHHcCCCCCChhhHHHHHHHhccCcCCCcCCCCCCCCCCCc
Q psy1059 79 GVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYEN---FAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGY 155 (512)
Q Consensus 79 ~~~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~---~~~~g~~~w~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~g~ 155 (512)
........+.+++++||+|.+|++.+.|+.+.||+. |. .+|+|++ +||++++...... ..+...|+
T Consensus 79 ~~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~----~~w~~~~--p~~~k~e~~~~~~-----~~~~~~g~ 147 (546)
T 1kdg_A 79 FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWP----SSWTNHA--PYTSKLSSRLPST-----DHPSTDGQ 147 (546)
T ss_dssp TTBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCC----GGGSCCH--HHHHHHHHHSCCB-----SCCSTTSC
T ss_pred cccccccccccceeecccccccceEEecCChHHhcCcccCc----cccCccc--HHHHHHHhcCCCC-----ccCCCCCC
Confidence 011122456789999999999999999999999986 73 5788888 9999998754211 11111221
Q ss_pred eeeccCCCCCcchHHHHHHHHHHHcCCCCCCCCCC--CCcccceeecccccCCCeecchhhhhhhcccCCCCCEEEEcCc
Q psy1059 156 LPVGLFKNKENNIIREIFETSAQELGYPCPKDMND--RYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRS 233 (512)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~--~~~~~g~~~~~~~~~~~~r~~~~~~~l~~~~~~~~g~~v~~~~ 233 (512)
.+. .+....+.++++++|++......+ .. ..|+..+...+.++.|.++..+|+.++. ++.|++|++++
T Consensus 148 ------~~~--~~~~~~~~~a~~~~G~~~~~~~~~~~~~-~~g~~~~~~~~~~g~R~s~~~~~l~~~~-~~~~~~i~~~~ 217 (546)
T 1kdg_A 148 ------RYL--EQSFNVVSQLLKGQGYNQATINDNPNYK-DHVFGYSAFDFLNGKRAGPVATYLQTAL-ARPNFTFKTNV 217 (546)
T ss_dssp ------CCS--CHHHHHHHHHHHTTTCEECCGGGSTTCC-TTEEEECCBCEETTEECHHHHTHHHHHH-TCTTEEEECSC
T ss_pred ------ccC--CHHHHHHHHHHHHCCCCcCCccCCcCCC-CcEEeeeeeccCCCcccCHHHHHHHHHh-hCCCcEEEeCC
Confidence 133 466678888888899864421111 13 4567777777788999998888998888 77899999999
Q ss_pred EEEEEEecCCCeEEEEEEEec-CCe--EEEEecCcEEEEcCCchhcHHHHHHcCCCChhhhccC------CCCcc-----
Q psy1059 234 KVTKVIINDQNVATGVEYVNS-KGE--TVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEV------KIPVK----- 299 (512)
Q Consensus 234 ~V~~i~~~~~~~v~GV~~~~~-~g~--~~~v~A~k~VVlaaGa~~t~~lL~~Sgig~~~~l~~~------gi~~~----- 299 (512)
.|++|+++ +++++||++.+. +|+ +.++.+.|+||||||+++||+||++|||||+++|+.+ ||+++
T Consensus 218 ~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~ 296 (546)
T 1kdg_A 218 MVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQW 296 (546)
T ss_dssp CEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGC
T ss_pred EEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCccccccccc
Confidence 99999998 889999999763 364 3345444589999999999999999999999999998 58774
Q ss_pred cccccccccccccCCCcceEEecCC-cc-c-----ccccHHHHHHHhhcCCCCCCCcccceEEEEEecCCC-C-------
Q psy1059 300 QDLRVGENLKLNAQFTGPVMAFSAP-LK-R-----TVYSQEMVFKYLVNRIGPLSNAGLWSFTGYIDTLQN-T------- 364 (512)
Q Consensus 300 ~~~~vG~~l~dh~~~~~~~~~~~~~-~~-~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~------- 364 (512)
.++|||+||+||+.+. +.+..+.. .. . ..........|...+.||+..... .. .|+..... .
T Consensus 297 ~dlpVG~nL~DH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 373 (546)
T 1kdg_A 297 INLPVGMNAQDNPSIN-LVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGASP-KL-NFWRAYSGSDGFTRYAQ 373 (546)
T ss_dssp BCCCTTTTBBCCCCEE-EEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCSC-CE-EEEEEEECTTSCEEEEE
T ss_pred ccCCcccCcccCccee-EEEecCCcccccchhhhhcchhHHHHHHHHHcCCcccccCCc-ce-EEEEccCCCCcchhhhh
Confidence 7888999999999984 66652221 10 0 011223455676666777643211 00 11110000 0
Q ss_pred ----------------------------CCC---CeEEEEecccc-chhhHHH------HHHHHHHHHHHHHHhcchhHH
Q psy1059 365 ----------------------------ARP---DLEIHLLYFQQ-NDIRNMY------LATLIRGTDYITRLEQTEAIR 406 (512)
Q Consensus 365 ----------------------------~~p---~~~~~~~~~~~-~~~~~~y------~~~~~~~~~~~~~~~~~~~~~ 406 (512)
..| .-...+.+... +.++.+| .+.+.++++.+++++++..
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~-- 451 (546)
T 1kdg_A 374 GTVRPGAASVNSSLPYNASQIFTITVYLSTGIQSRGRIGIDAALRGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIP-- 451 (546)
T ss_dssp EEEEESCSCCCCSSCCCGGGEEEEEEEECTTCCCCBEEEECTTCCEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGST--
T ss_pred heecccccccccccccCCCCeEEEEeeecCCCCCCceEecCCCCCCCcccccccCCchHHHHHHHHHHHHHHHhcCCC--
Confidence 000 00111100000 0011122 7889999999998876432
Q ss_pred HhcccccccCCccCCCCCCCCHHHHHHHHHhhcCCCccccccccccCCCCCCCccCCCCeEeccCCcEEEeeccCCCCCC
Q psy1059 407 LAGGTLMSLNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAII 486 (512)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~~Mg~~~~~~~VvD~~~rv~g~~nl~V~D~Sv~P~~~~ 486 (512)
...+ ..|+. ..+++++.++++....+.+|++||||||+++ .++|||++|||||++||||||+||||++++
T Consensus 452 --~~~~---~~p~~----~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~-~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~ 521 (546)
T 1kdg_A 452 --GLTM---ITPDV----TQTLEEYVDAYDPATMNSNHWVSSTTIGSSP-QSAVVDSNVKVFGTNNLFIVDAGIIPHLPT 521 (546)
T ss_dssp --TCEE---EESCT----TSCHHHHHHHSCGGGGCCSCCBCTTCBCSCT-TTCSBCTTCBBTTCSSEEECSGGGCSSCCS
T ss_pred --cccc---cCCCC----CCCHHHHHHHHHHhcCcccccccceecCCCC-CCeeECCCCeEccCCCcEEeEecccCCCCC
Confidence 1111 12221 3578888889888888999999999999986 579999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhhcCCC
Q psy1059 487 TQSDAISYMIGEKCADLVKTSYNIP 511 (512)
Q Consensus 487 ~np~lTi~ala~r~a~~i~~~~~~~ 511 (512)
+||++|+||||+|+||+|++++++|
T Consensus 522 ~np~~ti~aiAeraAd~I~~~~~~~ 546 (546)
T 1kdg_A 522 GNPQGTLMSAAEQAAAKILALAGGP 546 (546)
T ss_dssp SCSHHHHHHHHHHHHHHHHHSTTCC
T ss_pred ccHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999987
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=3.6e-57 Score=466.07 Aligned_cols=438 Identities=16% Similarity=0.163 Sum_probs=291.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCC-CC--ccCCccccccCCccccceeccccc----------
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI-HS--RIPGMSSVLSLSEFDHAYLAEPSQ---------- 74 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~---------- 74 (512)
..+||+||||+|++|+++|.+|++. |.+|+|||+|..... .. ..+... ......+.|.|.+.|+.
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~ 80 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVV 80 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCCcccccccc-cccCccccccccccccccccccccccc
Confidence 3579999999999999999999997 999999999985431 11 111111 11123467888877652
Q ss_pred ----CcccC----CCCceeeeecCcccchhhhhcCceeecCChhhHHHHHHcCCCCCChhhHH-HHHHHhccCcCCCcCC
Q psy1059 75 ----FAGLG----VRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL-KYFVKSEDYRSVIYNE 145 (512)
Q Consensus 75 ----~~~~~----~~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~~~g~~~w~~~~l~-~~~~~~e~~~~~~~~~ 145 (512)
....+ ..++.+.+.+|++|||+|.+|++++.|+++.||+.|. .+|.|++++ |||+++|+++......
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~ 156 (504)
T 1n4w_A 81 NRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNHID 156 (504)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCC
T ss_pred cccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCCCC
Confidence 01111 1566788999999999999999999999999999996 679999999 9999999976432110
Q ss_pred CCCCCCCCCceeeccCCCCCcchHHHHHHHHHHHcCC-----CCCCCCCCC--------CcccceeecccccCCCeecch
Q psy1059 146 SKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGY-----PCPKDMNDR--------YVDVGFAELPGMTRYGLRFSA 212 (512)
Q Consensus 146 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~-----~~~~~~~~~--------~~~~g~~~~~~~~~~~~r~~~ 212 (512)
...+ ...+ . .+..+.+.++++++|+ |...++++. ..+..++.|...|.++ |.++
T Consensus 157 -~~~~--------~~~~-~--~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~ 223 (504)
T 1n4w_A 157 -TKWF--------EDTE-W--YKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSL 223 (504)
T ss_dssp -HHHH--------HHCG-G--GHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCT
T ss_pred -cccc--------cCCC-c--chHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCH
Confidence 0000 0000 1 4677888999999998 544333211 0133445566677889 9998
Q ss_pred hhhhhhcccCCCCCEEEEcCcEEEEEEecC-CCeEEEEEEEecCC---eEEEEecCcEEEEcCCchhcHHHHHHcC-CCC
Q psy1059 213 ADAYLTPIAGKRTNLYVLKRSKVTKVIIND-QNVATGVEYVNSKG---ETVRVTANKEVILTAGAIANAQLLLLSG-IGP 287 (512)
Q Consensus 213 ~~~~l~~~~~~~~g~~v~~~~~V~~i~~~~-~~~v~GV~~~~~~g---~~~~v~A~k~VVlaaGa~~t~~lL~~Sg-ig~ 287 (512)
..+||.++. ++.|++|++++.|++|++++ +++++||++.+.+| +..+++|+ +||||||+++||+||++|| ||
T Consensus 224 ~~~~l~~a~-~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~-~VIlaaG~~~s~~lL~~Sg~ig- 300 (504)
T 1n4w_A 224 DKTYLAAAL-GTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCR-YLFLGAGSLGSTELLVRARDTG- 300 (504)
T ss_dssp TTTHHHHHH-HTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHH-hcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeC-EEEEccCCCCCHHHHHhccccC-
Confidence 889998887 67789999999999999983 34899999986456 56789997 8999999999999999999 87
Q ss_pred hhhhccCCCCcccccccccccccccCCCcceEEecC-Cc---ccccccHHHHHHHhhcCCCCCC----------Ccccce
Q psy1059 288 KAHLDEVKIPVKQDLRVGENLKLNAQFTGPVMAFSA-PL---KRTVYSQEMVFKYLVNRIGPLS----------NAGLWS 353 (512)
Q Consensus 288 ~~~l~~~gi~~~~~~~vG~~l~dh~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~g~~~----------~~~~~~ 353 (512)
+|+++.+ .||+||+||+... +.+.... .. +........+..+. ....|.. ......
T Consensus 301 -------~i~~~~~-~VG~nl~dh~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 370 (504)
T 1n4w_A 301 -------TLPNLNS-EVGAGWGPNGNIM-TARANHMWNPTGAHQSSIPALGIDAWD-NSDSSVFAEIAPMPAGLETWVSL 370 (504)
T ss_dssp -------SSTTCCT-TTTCCBBCTTCEE-EEEECCTTCCCCSCCCSSCCEEEEECC-SSTTCEEEEEECCCCSSCCCEEE
T ss_pred -------CCCCCCh-hhccccccCCcce-eeeccCCCCcccCcCCCccEEEEeccC-CCCCceEEEeccCChHHHhhhhh
Confidence 5666543 4999999999764 4332211 00 00000000000000 0000100 000000
Q ss_pred EEEEEecCCC------CCCCCeEEEEeccccchhhHHHHHHHHHHHH-HHHHHhcchhHHHhcccccccCCccCCCCCCC
Q psy1059 354 FTGYIDTLQN------TARPDLEIHLLYFQQNDIRNMYLATLIRGTD-YITRLEQTEAIRLAGGTLMSLNLEACSQYPWR 426 (512)
Q Consensus 354 ~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (512)
.......... ..-|.+.+.+...+ | +.+.++++ .++++++.... . +..+. .
T Consensus 371 ~~~~~~p~srG~V~L~s~~~~i~~~~~~~~-D-------~~~~~~~~~~~~~i~~~~~~-------~----~~~~~--~- 428 (504)
T 1n4w_A 371 YLAITKNPQRGTFVYDAATDRAKLNWTRDQ-N-------APAVNAAKALFDRINKANGT-------I----YRYDL--F- 428 (504)
T ss_dssp EEEEECCCCCBCEEEETTTTEEEECCCGGG-G-------HHHHHHHHHHHHHHHHHHTC-------C----BCCSS--S-
T ss_pred heeeeccCCCcEEEecCCCCceEeccCCCc-C-------HHHHHHHHHHHHHHHhccCC-------C----cCCch--h-
Confidence 1111111110 01233333332221 1 24677777 77777753321 1 11000 0
Q ss_pred CHHHHHHHHHhhcCCCccccccccccCCCCCCCccCCCCeEeccCCcEEEeeccCCCCCCCCchHHHHHHHHHHHHHHHh
Q psy1059 427 STHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKT 506 (512)
Q Consensus 427 ~~~~~~~~~~~~~~~~~H~~Gt~~Mg~~~~~~~VvD~~~rv~g~~nl~V~D~Sv~P~~~~~np~lTi~ala~r~a~~i~~ 506 (512)
..+ +++ ....+.+|++|||||| +|||++|||||++||||||+||||+++++||++|+||||+|+||+|++
T Consensus 429 ~~~-~~~---~~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~ 498 (504)
T 1n4w_A 429 GTQ-LKA---FADDFCYHPLGGCVLG------KATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIK 498 (504)
T ss_dssp SSS-CCS---EECSEESSCBCSSCTT------TTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHH
T ss_pred hhh-hhh---hccCccccccCCceee------eEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHH
Confidence 000 000 1346789999999999 899999999999999999999999999999999999999999999998
Q ss_pred hcC
Q psy1059 507 SYN 509 (512)
Q Consensus 507 ~~~ 509 (512)
++.
T Consensus 499 ~~~ 501 (504)
T 1n4w_A 499 QDV 501 (504)
T ss_dssp HHC
T ss_pred hhc
Confidence 764
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=4.8e-56 Score=457.66 Aligned_cols=439 Identities=19% Similarity=0.190 Sum_probs=290.0
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCCCCccCC---ccccc-cCCccccceecccccCc----
Q psy1059 5 VKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPG---MSSVL-SLSEFDHAYLAEPSQFA---- 76 (512)
Q Consensus 5 ~~~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~---- 76 (512)
.....+||+||||+|.+|+++|.+|++. |.+|+|||+|..... ..|. +.... ....+.|.|.+.|+...
T Consensus 6 ~~~~~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~ 82 (507)
T 1coy_A 6 LADGDRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMG 82 (507)
T ss_dssp CCTTCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTT
T ss_pred CCcCCcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCC--CCCccccccccccccccccccccccccccccccc
Confidence 3456789999999999999999999997 999999999985431 1221 11111 12357898888776210
Q ss_pred -------ccCC------CCceeeeecCcccchhhhhcCceeecCChhhHHHHHHcCCCCCChhhHH-HHHHHhccCcCCC
Q psy1059 77 -------GLGV------RNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETL-KYFVKSEDYRSVI 142 (512)
Q Consensus 77 -------~~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~~~g~~~w~~~~l~-~~~~~~e~~~~~~ 142 (512)
.... .++.+.+.+|++|||+|.+|++++.|+.+.||+.|. .+|.|++++ |||+++|+++...
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~ 158 (507)
T 1coy_A 83 FGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVN 158 (507)
T ss_dssp BSCCCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCB
T ss_pred cccccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCC
Confidence 0112 466788999999999999999999999999999996 578999999 9999999987432
Q ss_pred cCCCCCCCCCCCceeeccCCCCCcchHHHHHHHHHHHcCC-----CCCCCCCCC--------CcccceeecccccCCCee
Q psy1059 143 YNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGY-----PCPKDMNDR--------YVDVGFAELPGMTRYGLR 209 (512)
Q Consensus 143 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~-----~~~~~~~~~--------~~~~g~~~~~~~~~~~~r 209 (512)
.. .. ........ .+..+.+.++++++|+ |...++++. ..+..++.|...|.++ |
T Consensus 159 ~~--------~~--~~~~~~~~--~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R 225 (507)
T 1coy_A 159 NI--------DQ--AWFESTEW--YKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-K 225 (507)
T ss_dssp CC--------CH--HHHHHCGG--GHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-B
T ss_pred CC--------CC--cccccccc--chHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-C
Confidence 10 00 00000001 4677889999999999 554343211 0133455566667889 9
Q ss_pred cchhhhhhhcccCCCCCEEEEcCcEEEEEEecCCC-eEEEEEEEecCC---eEEEEecCcEEEEcCCchhcHHHHHHcC-
Q psy1059 210 FSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQN-VATGVEYVNSKG---ETVRVTANKEVILTAGAIANAQLLLLSG- 284 (512)
Q Consensus 210 ~~~~~~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~-~v~GV~~~~~~g---~~~~v~A~k~VVlaaGa~~t~~lL~~Sg- 284 (512)
+++..+||.++. ++.|++|+++++|++|++++++ +++||++.+.+| +..+++|+ +||||||+++||+||++||
T Consensus 226 ~s~~~~~l~~a~-~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~-~VIlaaGa~~sp~lL~~Sg~ 303 (507)
T 1coy_A 226 KSLDKTYLAQAA-ATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTAD-RVFFAAGSVGTSKLLVSMKA 303 (507)
T ss_dssp CCTTTTHHHHHH-HTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHH-hcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeC-EEEEccCccCCHHHHHhccc
Confidence 998889998887 7778999999999999998224 899999986445 46789997 8999999999999999999
Q ss_pred CCChhhhccCCCCcccccccccccccccCCCcceE-EecCC---cccccccHHHHHHHhhcCCCC-------CC---Ccc
Q psy1059 285 IGPKAHLDEVKIPVKQDLRVGENLKLNAQFTGPVM-AFSAP---LKRTVYSQEMVFKYLVNRIGP-------LS---NAG 350 (512)
Q Consensus 285 ig~~~~l~~~gi~~~~~~~vG~~l~dh~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~g~-------~~---~~~ 350 (512)
||. +++..+ .||+||++|+... ... .+... .+........+..|. ....| +. ...
T Consensus 304 iG~--------lpnl~d-~VG~~l~~h~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 372 (507)
T 1coy_A 304 QGH--------LPNLSS-QVGEGWGNNGNIM-VGRANHMWDATGSKQATIPTMGIDNWA-DPTAPIFAEIAPLPAGLETY 372 (507)
T ss_dssp TTS--------STTSCT-TTTCCBBCTTEEE-EEEECCTTSCCCSCCCSSCCEEEECTT-CTTSCEEEEEECCCCSSCCC
T ss_pred CCC--------CCccCh-hhCCccccCCccc-ccccccccccccccCCCcceEEEeccC-CCCCCcEEEeccCCHHHhhh
Confidence 872 342222 3999999998642 211 11101 000000000000000 00000 00 000
Q ss_pred cceEEEEEecCCC------CCCCCeEEEEeccccchhhHHHHHHHHHHHH-HHHHHhcchhHHHhcccccccCCccCCCC
Q psy1059 351 LWSFTGYIDTLQN------TARPDLEIHLLYFQQNDIRNMYLATLIRGTD-YITRLEQTEAIRLAGGTLMSLNLEACSQY 423 (512)
Q Consensus 351 ~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (512)
...+......... ..-|.+.+.+...+ | . .+.++++ .++++++... . ....+.
T Consensus 373 ~~~~~~~~~p~s~G~V~L~s~~~~i~~~~~~~~-D------~-~~~~~~~~~~~~i~~~~~-----~-~~~~~~------ 432 (507)
T 1coy_A 373 VSLYLAITKNPERARFQFNSGTGKVDLTWAQSQ-N------Q-KGIDMAKKVFDKINQKEG-----T-IYRTDL------ 432 (507)
T ss_dssp EEEEEEEECCCCCBCEEEETTTTEEEECCCGGG-G------H-HHHHHHHHHHHHHHHHHT-----C-CBCSSC------
T ss_pred eeeeEEEeeeCCCcEEEEccCCCceeeccCCCC-c------H-HHHHHHHHHHHHHHhhcC-----C-cccCcc------
Confidence 0011111111110 01233333333222 1 2 4666666 7777775322 1 111011
Q ss_pred CCCCHHHHHHHHHhhcCCCccccccccccCCCCCCCccCCCCeEeccCCcEEEeeccCCCCCCCCchHHHHHHHHHHHHH
Q psy1059 424 PWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADL 503 (512)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~H~~Gt~~Mg~~~~~~~VvD~~~rv~g~~nl~V~D~Sv~P~~~~~np~lTi~ala~r~a~~ 503 (512)
..+++ ++| ...+.+|++|||||| +|||++|||||++||||||+||||+++++||++||||||+|+||+
T Consensus 433 -~~~d~--~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~ 500 (507)
T 1coy_A 433 -FGVYY--KTW---GDDFTYHPLGGVLLN------KATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDK 500 (507)
T ss_dssp -C--CC--CSS---BCSEESCCBCSSCTT------TTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHH
T ss_pred -cccch--hhh---cccccccccCCcchh------heECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHH
Confidence 11111 112 346789999999999 599999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q psy1059 504 VKTSY 508 (512)
Q Consensus 504 i~~~~ 508 (512)
|+++.
T Consensus 501 I~~~~ 505 (507)
T 1coy_A 501 IISSD 505 (507)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98763
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=4.2e-45 Score=383.24 Aligned_cols=438 Identities=17% Similarity=0.178 Sum_probs=263.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCCCCccCCcccccc-----CCcc------------------
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLS-----LSEF------------------ 64 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~~~~~~~~~~~~~-----~~~~------------------ 64 (512)
..+|||||||+|++|+++|..|+++ |++|+|||+++....... +....... ...+
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~-G~~V~liE~~~~~gg~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~ 121 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSGLKI-GAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTL 121 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCSSSST-TCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCC
T ss_pred cccCCEEEECCcHHHHHHHHHHHhC-CCcEEEEeccCCCCCccc-ccccccccCCCccHHHHHHHHHHhhhhcccccccc
Confidence 3579999999999999999999998 999999999886542110 00000000 0000
Q ss_pred --------ccceecccccCcccCCCC--ceee----eecCcccchhhhhcCceeecCChhhHHHHHHcCCCCC---Chhh
Q psy1059 65 --------DHAYLAEPSQFAGLGVRN--ARIK----ITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGW---GYDE 127 (512)
Q Consensus 65 --------~~~~~~~~~~~~~~~~~~--~~~~----~~~g~~lGG~s~~~~~~~~r~~~~~~~~~~~~g~~~w---~~~~ 127 (512)
.|.... ......... ..+. ...+..+||.+.+|.+...|..+.+ .+.. ..+| .+.+
T Consensus 122 ~~~~~~~~~~~~~~---v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e--~~~~--l~~~~v~~~~~ 194 (623)
T 3pl8_A 122 VVDTLSPTSWQAST---FFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQ--RPLL--VKDDADADDAE 194 (623)
T ss_dssp CCCCSCTTSCCCSS---CCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGG--SCCS--STTCHHHHHHH
T ss_pred ccccccccccccCc---EEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHH--hhhh--hcccCccChhh
Confidence 000000 000000000 0011 1245668899999999888877642 1100 1222 3566
Q ss_pred HHHHHHHhccCcCCCcCCCCCCCCCCCceeeccCCCCCcchHHHHHHHHHHHcCCCCCCCCCCCCcccceeecccccCCC
Q psy1059 128 TLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYG 207 (512)
Q Consensus 128 l~~~~~~~e~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (512)
+.++|...+........ .+.. ..........+........ .+... ...... .....
T Consensus 195 l~~~~~~~~~l~~vgg~-----------------~~~~-~~~~~~~~~~l~~~~~~~~-~~~~~--p~a~~~---~~~~~ 250 (623)
T 3pl8_A 195 WDRLYTKAESYFQTGTD-----------------QFKE-SIRHNLVLNKLTEEYKGQR-DFQQI--PLAATR---RSPTF 250 (623)
T ss_dssp HHHHHHHHHHHHTEESC-----------------TTTT-CHHHHHHHHHHHHHTTTTS-CCEEC--CEEEEE---EETTE
T ss_pred HHHHHHHHHHhcccccc-----------------cccC-ccccccchHHHHHhhhhcc-ccccc--chhhcc---CCCCc
Confidence 78888887766532210 0110 1111111222222111000 00000 000000 01233
Q ss_pred eecchhhhhhhcc------cCCCCCEEEEcCcEEEEEEec-CCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHH
Q psy1059 208 LRFSAADAYLTPI------AGKRTNLYVLKRSKVTKVIIN-DQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQL 279 (512)
Q Consensus 208 ~r~~~~~~~l~~~------~~~~~g~~v~~~~~V~~i~~~-~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~l 279 (512)
.|+++..+++.+. . +++|++|++++.|++|+.+ ++++++||++.+. +|+..++.|+ +||||+|++.||+|
T Consensus 251 ~r~s~~~~~l~~~~~l~~~~-~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~-~VIlaaG~~~s~~l 328 (623)
T 3pl8_A 251 VEWSSANTVFDLQNRPNTDA-PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKAD-VYVLTAGAVHNTQL 328 (623)
T ss_dssp EEECCHHHHCCCCCEEETTE-EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEE-EEEECSCTTHHHHH
T ss_pred cccchHHhhhhhhhcchhhc-cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECC-EEEEcCCCcCCHHH
Confidence 4666667777766 5 5679999999999999997 2359999999973 6888899997 89999999999999
Q ss_pred HHHcCCCChhhhccCCCCcccccc-cccccccccCCCcceEEecCCcc------------cc--cc--------------
Q psy1059 280 LLLSGIGPKAHLDEVKIPVKQDLR-VGENLKLNAQFTGPVMAFSAPLK------------RT--VY-------------- 330 (512)
Q Consensus 280 L~~Sgig~~~~l~~~gi~~~~~~~-vG~~l~dh~~~~~~~~~~~~~~~------------~~--~~-------------- 330 (512)
|++||||+..+++..||++ ++| ||+||+||+... +.+.+.+... .+ .+
T Consensus 329 L~~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~~-~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~ 405 (623)
T 3pl8_A 329 LVNSGFGQLGRPNPANPPE--LLPSLGSYITEQSLVF-CQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHP 405 (623)
T ss_dssp HHTTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEEE-EEEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSC
T ss_pred HHhcCCCccccccccCCCC--CCcccccchhhCcCce-EEEEECCcccccccccccccccCCCcceecccccCcccccCC
Confidence 9999999999999999998 889 999999999984 7777764310 00 00
Q ss_pred --cHHHHHH-HhhcCCCCCCC-----------------------------ccc----------ceEEEEEecCCC-----
Q psy1059 331 --SQEMVFK-YLVNRIGPLSN-----------------------------AGL----------WSFTGYIDTLQN----- 363 (512)
Q Consensus 331 --~~~~~~~-~~~~~~g~~~~-----------------------------~~~----------~~~~~~~~~~~~----- 363 (512)
....+.+ |.....+|+.. .+. ..+..+....+.
T Consensus 406 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~n~v 485 (623)
T 3pl8_A 406 DWWNEKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTEPKEENKL 485 (623)
T ss_dssp HHHHHHHHHHHHHCTTCCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCCSCCCCSSCGGGEEEEEEEECCCCCTTCEE
T ss_pred chhhhhhhhhhhcccccccccccccccccccccccccCcchhhhhhhhccccccccccccceEEEEEEEEeeccCCCCEE
Confidence 0111222 22211122110 000 001111111100
Q ss_pred ---------CCCCCeEEEEeccccchhhHHHHHHHHHHHHHHHHHhcchhHHHhcccccccCCccCCCCCCCCHHHHHHH
Q psy1059 364 ---------TARPDLEIHLLYFQQNDIRNMYLATLIRGTDYITRLEQTEAIRLAGGTLMSLNLEACSQYPWRSTHSWTCY 434 (512)
Q Consensus 364 ---------~~~p~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (512)
.+.|.+.+.+...+. .+ .+.+..+++.+.++++. +|..... ..+. .
T Consensus 486 ~L~~~~~D~~g~P~~~~~~~~~~~--~d---~~~~~~~~~~~~~~~~~-----~g~~~~~-~~~~-----~--------- 540 (623)
T 3pl8_A 486 WFSDKITDAYNMPQPTFDFRFPAG--RT---SKEAEDMMTDMCVMSAK-----IGGFLPG-SLPQ-----F--------- 540 (623)
T ss_dssp EEEEEEECTTSSEEEEEECCCCTT--HH---HHHHHHHHHHHHHHHTT-----TEEECTT-SCSE-----E---------
T ss_pred EECCCCcCCCCCceEEEEEeCCcH--HH---HHHHHHHHHHHHHHHHh-----cCCcccC-chhh-----c---------
Confidence 023444444433332 02 66778888888888752 3332210 0000 0
Q ss_pred HHhhcCCCccccccccccCCCCCCCcc-CCCCeEeccCCcEEEeeccCCCCCCCCchHHHHHHHHHHHHHHHhhcCC
Q psy1059 435 IRHLTTTTSNPVGTVMMGNADDPNAVV-TPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSYNI 510 (512)
Q Consensus 435 ~~~~~~~~~H~~Gt~~Mg~~~~~~~Vv-D~~~rv~g~~nl~V~D~Sv~P~~~~~np~lTi~ala~r~a~~i~~~~~~ 510 (512)
....+++|++||||||.+++.+||| |+++||||++||||+|+|+||+++++||++||||||+|+|++|+++++.
T Consensus 541 --~~~~~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~ 615 (623)
T 3pl8_A 541 --MEPGLVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTP 615 (623)
T ss_dssp --CCTTTTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCC
T ss_pred --cCCCCcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhc
Confidence 0125789999999999983357998 9999999999999999999999999999999999999999999998853
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.68 E-value=1.7e-15 Score=156.11 Aligned_cols=66 Identities=21% Similarity=0.327 Sum_probs=52.8
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchh-cHHHHHH
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA-NAQLLLL 282 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~-t~~lL~~ 282 (512)
..|...+ ++.|++|+++++|++|+.+++++|+||++.+ +|+..+|+|+|.||||+|++. ++.++.+
T Consensus 206 ~~L~~~~-~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-~g~~~~i~A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 206 KPLVETA-EKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-YGKEVAVRARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp HHHHHHH-HHTTCEEECSEEEEEEEECTTCCEEEEEEEE-TTEEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHH-HHcCCEEEecCEeEEEEECCCCcEEEEEEEE-CCcEEEEEeCCeEEEeCCChhhCHHHHHH
Confidence 3344444 4679999999999999987458999999988 777788999657999999998 5666554
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.52 E-value=1.1e-13 Score=144.36 Aligned_cols=63 Identities=19% Similarity=0.277 Sum_probs=50.5
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCC-CeEEEEEEEecCCeEEEEecCcEEEEcCCchhc-HHHH
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQ-NVATGVEYVNSKGETVRVTANKEVILTAGAIAN-AQLL 280 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~-~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t-~~lL 280 (512)
..|...+ ++.|++|+++++|++|+.+ + ++++||++.+.+|+..+++|+ .||||+|++.. ++++
T Consensus 254 ~~L~~~~-~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~A~-~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 254 DTLRKAA-KEQGIDTRLNSRVVKLVVN-DDHSVVGAVVHGKHTGYYMIGAK-SVVLATGGYGMNKEMI 318 (566)
T ss_dssp HHHHHHH-HHTTCCEECSEEEEEEEEC-TTSBEEEEEEEETTTEEEEEEEE-EEEECCCCCTTCHHHH
T ss_pred HHHHHHH-HhcCCEEEeCCEEEEEEEC-CCCcEEEEEEEeCCCcEEEEEcC-EEEEecCCcccCHHHH
Confidence 3344444 4679999999999999998 6 899999998656877789996 79999999986 4444
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.49 E-value=4.2e-13 Score=140.19 Aligned_cols=64 Identities=19% Similarity=0.202 Sum_probs=50.7
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCC-CeEEEEEEEecCCeEEEEecCcEEEEcCCchhc-HHHHH
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQ-NVATGVEYVNSKGETVRVTANKEVILTAGAIAN-AQLLL 281 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~-~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t-~~lL~ 281 (512)
..|...+ ++.|++|+++++|++|+.+ + ++++||++.+.+|+..+++|+ .||||+|++.. +.++.
T Consensus 259 ~~L~~~~-~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~a~-~VVlAtGg~~~n~~~~~ 324 (571)
T 1y0p_A 259 QVLYDNA-VKRNIDLRMNTRGIEVLKD-DKGTVKGILVKGMYKGYYWVKAD-AVILATGGFAKNNERVA 324 (571)
T ss_dssp HHHHHHH-HHTTCEEESSEEEEEEEEC-TTSCEEEEEEEETTTEEEEEECS-EEEECCCCCTTCHHHHH
T ss_pred HHHHHHH-HhcCCEEEeCCEeeEeEEc-CCCeEEEEEEEeCCCcEEEEECC-eEEEeCCCcccCHHHHH
Confidence 3444444 4679999999999999988 5 899999998656877789998 69999999875 44443
No 15
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.43 E-value=2.6e-12 Score=134.19 Aligned_cols=57 Identities=14% Similarity=0.194 Sum_probs=47.9
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEe-cCCeEEEEecCcEEEEcCCchhc
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVN-SKGETVRVTANKEVILTAGAIAN 276 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~-~~g~~~~v~A~k~VVlaaGa~~t 276 (512)
|...+ .+.|++|++++.|++|+.+ +++++||.+.+ .+|+...++|+ .||||+|++..
T Consensus 161 L~~~~-~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRS-LRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAK-NTVIATGGYGR 218 (621)
T ss_dssp HHHHH-TTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHHH-HhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCcccc
Confidence 33444 5689999999999999998 89999999986 36877789997 79999999874
No 16
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.43 E-value=2.4e-13 Score=134.16 Aligned_cols=64 Identities=13% Similarity=0.092 Sum_probs=47.7
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHc-CCC
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLS-GIG 286 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~S-gig 286 (512)
|...+ ++.|++++++++|++|..+ ++.+..|++. +|+..+++|+ .||+|+|++ |..|+... |+.
T Consensus 156 l~~~~-~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~--~g~~~~~~a~-~VV~A~G~~-s~~l~~~~~g~~ 220 (369)
T 3dme_A 156 YQGDA-ESDGAQLVFHTPLIAGRVR-PEGGFELDFG--GAEPMTLSCR-VLINAAGLH-APGLARRIEGIP 220 (369)
T ss_dssp HHHHH-HHTTCEEECSCCEEEEEEC-TTSSEEEEEC--TTSCEEEEEE-EEEECCGGG-HHHHHHTEETSC
T ss_pred HHHHH-HHCCCEEECCCEEEEEEEc-CCceEEEEEC--CCceeEEEeC-EEEECCCcc-hHHHHHHhcCCC
Confidence 33344 5679999999999999987 5543445544 4655679998 699999986 78888877 764
No 17
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.42 E-value=2.5e-12 Score=135.25 Aligned_cols=52 Identities=12% Similarity=0.243 Sum_probs=45.2
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhc
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIAN 276 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t 276 (512)
.+.|++|++++.|++|+.+ +++++||.+.+. +|+...++|+ .||||+|++..
T Consensus 169 ~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 221 (660)
T 2bs2_A 169 LKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAK-GTLIATGGYGR 221 (660)
T ss_dssp HHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECS-EEEECCCCCGG
T ss_pred HhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcC-EEEEccCcchh
Confidence 4579999999999999998 889999998763 6877789997 79999999874
No 18
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.41 E-value=3.5e-12 Score=133.03 Aligned_cols=53 Identities=15% Similarity=0.268 Sum_probs=44.6
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEe-cCCeEEEEecCcEEEEcCCchhc
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVN-SKGETVRVTANKEVILTAGAIAN 276 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~-~~g~~~~v~A~k~VVlaaGa~~t 276 (512)
.+.|++|+++++|++|+.+++++++||.+.+ .+|+..+++|+ .||||+|++..
T Consensus 154 ~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGg~~~ 207 (588)
T 2wdq_A 154 LKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKAR-ATVLATGGAGR 207 (588)
T ss_dssp HHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcC-EEEECCCCCcc
Confidence 3569999999999999985367899999886 36777789997 79999999864
No 19
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.40 E-value=5.8e-12 Score=131.29 Aligned_cols=65 Identities=18% Similarity=0.187 Sum_probs=51.0
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCC-CeEEEEEEEecCCeEEEEecCcEEEEcCCchhc-HHHHHH
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQ-NVATGVEYVNSKGETVRVTANKEVILTAGAIAN-AQLLLL 282 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~-~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t-~~lL~~ 282 (512)
..|...+ ++.|++|+++++|++|+.+ + ++++||++.+.+|+..+++|+ .||||+|++.. +.++..
T Consensus 259 ~~L~~~~-~~~gv~i~~~t~v~~l~~~-~~g~v~GV~~~~~~G~~~~i~A~-~VVlAtGg~~~~~~~~~~ 325 (572)
T 1d4d_A 259 QVLWDNA-VKRGTDIRLNSRVVRILED-ASGKVTGVLVKGEYTGYYVIKAD-AVVIAAGGFAKNNERVSK 325 (572)
T ss_dssp HHHHHHH-HHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECS-EEEECCCCCTTCHHHHHH
T ss_pred HHHHHHH-HHcCCeEEecCEEEEEEEC-CCCeEEEEEEEeCCCcEEEEEcC-EEEEeCCCCccCHHHHHH
Confidence 3344444 4679999999999999988 6 899999998656877789996 79999999874 565544
No 20
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.39 E-value=2.8e-12 Score=132.08 Aligned_cols=58 Identities=17% Similarity=0.192 Sum_probs=42.2
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHH
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 281 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~ 281 (512)
|...+ ++.|++|+++++|++|+.+ +++++||++.+ |+ ++.|+ .||++++...+.+.|+
T Consensus 227 L~~~~-~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~--g~--~~~ad-~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 227 MIKLF-QDLGGEVVLNARVSHMETT-GNKIEAVHLED--GR--RFLTQ-AVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETT--SC--EEECS-CEEECCC---------
T ss_pred HHHHH-HHhCCceeeecceeEEEee-CCeEEEEEecC--Cc--EEEcC-EEEECCCHHHHHHHhc
Confidence 33444 5789999999999999999 99999999876 76 78998 6999999888766555
No 21
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.38 E-value=5.4e-12 Score=130.29 Aligned_cols=52 Identities=25% Similarity=0.375 Sum_probs=43.5
Q ss_pred CCCEEEEcCcEEEEEEecCCC------eEEEEEEEec-CCeEEEEecCcEEEEcCCchhc
Q psy1059 224 RTNLYVLKRSKVTKVIINDQN------VATGVEYVNS-KGETVRVTANKEVILTAGAIAN 276 (512)
Q Consensus 224 ~~g~~v~~~~~V~~i~~~~~~------~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t 276 (512)
..|++|++++.|++|+.++++ ++.||.+.+. +|+..+++|+ .||||+|++..
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~~ 209 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAK-AVVLATGGASK 209 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECS-EEEECCCCCGG
T ss_pred CCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCccc
Confidence 379999999999999984145 8999999863 6877789997 79999999764
No 22
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.37 E-value=2.6e-12 Score=127.44 Aligned_cols=60 Identities=22% Similarity=0.280 Sum_probs=46.1
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
|...+ ++.|++++++++|++|..+ +++++||++.+ | +++|+ .||+|+|++ ++.|+...|+
T Consensus 155 l~~~~-~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~--g---~i~a~-~VV~A~G~~-s~~l~~~~g~ 214 (382)
T 1y56_B 155 FAVKA-KEYGAKLLEYTEVKGFLIE-NNEIKGVKTNK--G---IIKTG-IVVNATNAW-ANLINAMAGI 214 (382)
T ss_dssp HHHHH-HHTTCEEECSCCEEEEEES-SSBEEEEEETT--E---EEECS-EEEECCGGG-HHHHHHHHTC
T ss_pred HHHHH-HHCCCEEECCceEEEEEEE-CCEEEEEEECC--c---EEECC-EEEECcchh-HHHHHHHcCC
Confidence 33344 4679999999999999988 78888887532 4 69998 699999986 5667766664
No 23
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.34 E-value=2.2e-12 Score=135.53 Aligned_cols=48 Identities=19% Similarity=0.299 Sum_probs=42.3
Q ss_pred CEEEEcCcEEEEEEecCCC---eEEEEEEEec-CCeEEEEecCcEEEEcCCchh
Q psy1059 226 NLYVLKRSKVTKVIINDQN---VATGVEYVNS-KGETVRVTANKEVILTAGAIA 275 (512)
Q Consensus 226 g~~v~~~~~V~~i~~~~~~---~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~ 275 (512)
|++|+.++.|++|+.+ ++ +++||.+.+. +|+...++|+ .||||+|++.
T Consensus 182 gV~i~~~~~v~dLi~~-~~~~g~v~Gv~~~~~~~g~~~~i~Ak-~VVLATGG~g 233 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLD-KNTPNRIAGAVGFNLRANEVHIFKAN-AMVVACGGAV 233 (662)
T ss_dssp TTTEECSEEECCCEEC-SSSTTBEEEEEEEESSSSCEEEEECS-EEEECCCCBC
T ss_pred CcEEEEceEEEEEEEe-CCccceEEEEEEEEcCCCcEEEEEeC-EEEECCCccc
Confidence 9999999999999998 55 9999998763 6777889997 7999999986
No 24
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.34 E-value=8.9e-12 Score=129.38 Aligned_cols=61 Identities=21% Similarity=0.143 Sum_probs=52.1
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
.+.|++|+++++|++|..+ +++++||++.+. +|+..+++|+ .||+|+|++ +..|+...|+.
T Consensus 181 ~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~~-s~~l~~~~g~~ 242 (561)
T 3da1_A 181 VARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAK-KVVNAAGPW-VDTLREKDRSK 242 (561)
T ss_dssp HHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEE-EEEECCGGG-HHHHHHTTTCC
T ss_pred HHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECC-EEEECCCcc-hHHHHHhcCCC
Confidence 4679999999999999998 889999999874 5767789997 799999975 78888877764
No 25
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.34 E-value=6.1e-12 Score=125.79 Aligned_cols=60 Identities=22% Similarity=0.346 Sum_probs=45.8
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
|...+ ++.|++++++++|++|..+ ++++.+|++.+ | +++++ .||+|+|++ ++.++...|+
T Consensus 180 l~~~~-~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~--g---~~~a~-~vV~a~G~~-s~~l~~~~g~ 239 (405)
T 2gag_B 180 FARKA-NEMGVDIIQNCEVTGFIKD-GEKVTGVKTTR--G---TIHAG-KVALAGAGH-SSVLAEMAGF 239 (405)
T ss_dssp HHHHH-HHTTCEEECSCCEEEEEES-SSBEEEEEETT--C---CEEEE-EEEECCGGG-HHHHHHHHTC
T ss_pred HHHHH-HHCCCEEEcCCeEEEEEEe-CCEEEEEEeCC--c---eEECC-EEEECCchh-HHHHHHHcCC
Confidence 33444 4679999999999999988 77888887543 5 58897 699999985 5567766664
No 26
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.34 E-value=9.1e-12 Score=131.37 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=43.4
Q ss_pred CCC-CE-EEEcCcEEEEEEecCCC---eEEEEEEEe-cCCeEEEEecCcEEEEcCCchhc
Q psy1059 223 KRT-NL-YVLKRSKVTKVIINDQN---VATGVEYVN-SKGETVRVTANKEVILTAGAIAN 276 (512)
Q Consensus 223 ~~~-g~-~v~~~~~V~~i~~~~~~---~v~GV~~~~-~~g~~~~v~A~k~VVlaaGa~~t 276 (512)
++. |+ +|++++.|++|+.+ ++ +|+||.+.+ .+|+...++|+ .||||+|++..
T Consensus 162 ~~~~gv~~i~~~~~v~~L~~~-~~~~g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGG~~~ 219 (643)
T 1jnr_A 162 KMAVGEENIYERVFIFELLKD-NNDPNAVAGAVGFSVREPKFYVFKAK-AVILATGGATL 219 (643)
T ss_dssp HHHHCGGGEECSEEEEEEEEC-TTCTTBEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred HhcCCCcEEEecCEEEEEEEc-CCccceeEEEEEEEecCCcEEEEEcC-EEEECCCcccc
Confidence 344 89 99999999999988 55 999999865 36777789996 79999999864
No 27
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.33 E-value=5.9e-12 Score=124.77 Aligned_cols=54 Identities=20% Similarity=0.179 Sum_probs=41.4
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
++.|++|+++++|++|..+ +++ .+|++. +| +++|+ .||+|+|++ ++.|+...|+
T Consensus 165 ~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~--~g---~i~a~-~VV~A~G~~-s~~l~~~~g~ 218 (381)
T 3nyc_A 165 RRNQGQVLCNHEALEIRRV-DGA-WEVRCD--AG---SYRAA-VLVNAAGAW-CDAIAGLAGV 218 (381)
T ss_dssp HHTTCEEESSCCCCEEEEE-TTE-EEEECS--SE---EEEES-EEEECCGGG-HHHHHHHHTC
T ss_pred HHCCCEEEcCCEEEEEEEe-CCe-EEEEeC--CC---EEEcC-EEEECCChh-HHHHHHHhCC
Confidence 4679999999999999988 665 344432 24 69998 699999975 6777777665
No 28
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.33 E-value=4e-12 Score=128.59 Aligned_cols=56 Identities=25% Similarity=0.338 Sum_probs=44.6
Q ss_pred hhcccCCCCCEEEEcCc---EEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 217 LTPIAGKRTNLYVLKRS---KVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~---~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
|...+ ++.|++|++++ +|++|+.+ +++++||++.+ |+ +++|+ .||+|+|++ |++|+
T Consensus 167 L~~~a-~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~--G~--~i~Ad-~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 167 AAREA-QRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTAD--GK--IWRAE-RTFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHHH-HHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETT--TE--EEECS-EEEECCGGG-GGGTS
T ss_pred HHHHH-HhcCCEEEeCCcCceEEEEEec-CCeEEEEEECC--CC--EEECC-EEEECCCCC-hhhhc
Confidence 33444 56799999999 99999998 88999998755 64 68998 699999986 45554
No 29
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.32 E-value=3.7e-11 Score=125.55 Aligned_cols=53 Identities=17% Similarity=0.342 Sum_probs=44.6
Q ss_pred CCCC-EEEEcCcEEEEEEecCCCeEEEEEEEe-cCCeEEEEecCcEEEEcCCchhcH
Q psy1059 223 KRTN-LYVLKRSKVTKVIINDQNVATGVEYVN-SKGETVRVTANKEVILTAGAIANA 277 (512)
Q Consensus 223 ~~~g-~~v~~~~~V~~i~~~~~~~v~GV~~~~-~~g~~~~v~A~k~VVlaaGa~~t~ 277 (512)
.+.+ ++|++++.|++|+.+ +++++||.+.+ .+|+..+++|+ .||+|+|++...
T Consensus 145 ~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~s~~ 199 (602)
T 1kf6_A 145 LQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRAN-AVVMATGGAGRV 199 (602)
T ss_dssp TTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECS-CEEECCCCCGGG
T ss_pred HhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCCccc
Confidence 3445 999999999999998 88999998875 36877789998 699999998654
No 30
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.29 E-value=3.7e-11 Score=125.04 Aligned_cols=60 Identities=18% Similarity=0.235 Sum_probs=49.7
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
.+.|++|+++++|++|+.+ ++++.||++.+. +|+..+++|+ .||+|+|++ +..|+...|+
T Consensus 199 ~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 199 AEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAK-LVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBS-CEEECCGGG-HHHHHTTCCS
T ss_pred HHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcC-EEEECCChh-HHHHHHhhcc
Confidence 4679999999999999998 789999999874 4665679998 699999986 6777765553
No 31
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.27 E-value=4.8e-12 Score=128.12 Aligned_cols=64 Identities=16% Similarity=0.167 Sum_probs=48.4
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcH---------HHHHHcCCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANA---------QLLLLSGIG 286 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~---------~lL~~Sgig 286 (512)
.|...+ ++.|++|+++++|++|..+ ++++.+|++.+ |+ +++|+ .||+|+|++..| +++.+.|+.
T Consensus 139 ~L~~~~-~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~--G~--~i~Ad-~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 139 ALLTRL-KDLGVKIRTNTPVETIEYE-NGQTKAVILQT--GE--VLETN-HVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp HHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETT--CC--EEECS-CEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred HHHHHH-HHCCCEEEeCcEEEEEEec-CCcEEEEEECC--CC--EEECC-EEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 344444 4689999999999999988 78888887754 64 58997 699999998754 555555543
No 32
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.24 E-value=3.3e-11 Score=131.34 Aligned_cols=55 Identities=22% Similarity=0.276 Sum_probs=44.3
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
++.|++|+++++|++|..+ ++++++|++.+ | +++|+ .||+|+|++ ++.|+...|+
T Consensus 162 ~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~--G---~i~Ad-~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 162 ESAGVTYRGSTTVTGIEQS-GGRVTGVQTAD--G---VIPAD-IVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHTTCEEECSCCEEEEEEE-TTEEEEEEETT--E---EEECS-EEEECCGGG-HHHHHHTTTC
T ss_pred HHcCCEEECCceEEEEEEe-CCEEEEEEECC--c---EEECC-EEEECCccc-hHHHHHHhCC
Confidence 4679999999999999988 78888876532 4 59998 699999986 5777766664
No 33
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.19 E-value=1.9e-10 Score=114.69 Aligned_cols=36 Identities=25% Similarity=0.474 Sum_probs=33.7
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
+++||||||+|++|+++|+.|+++ |.+|+|||++..
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~~ 38 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHTF 38 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCC
Confidence 469999999999999999999998 999999999874
No 34
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.18 E-value=7.5e-11 Score=125.67 Aligned_cols=36 Identities=22% Similarity=0.199 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
..+||||||+|++|+++|+.|+++ |.+|+|||+...
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRR-GWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCc
Confidence 458999999999999999999998 999999999763
No 35
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.16 E-value=1.9e-10 Score=108.96 Aligned_cols=49 Identities=18% Similarity=0.196 Sum_probs=40.1
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEec----------CCeEEEEecCcEEEEcCCc
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS----------KGETVRVTANKEVILTAGA 273 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~----------~g~~~~v~A~k~VVlaaGa 273 (512)
++.|++++++++|++|..+ ++++.||++... .++..+++++ .||+|+|+
T Consensus 131 ~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad-~VV~AtG~ 189 (284)
T 1rp0_A 131 ARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAK-IVVSSCGH 189 (284)
T ss_dssp TSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEE-EEEECCCS
T ss_pred hcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECC-EEEECCCC
Confidence 4579999999999999988 888999988631 1344679997 79999996
No 36
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.16 E-value=2.5e-11 Score=123.12 Aligned_cols=34 Identities=38% Similarity=0.511 Sum_probs=32.1
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCC-CeEEEEcCc
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAG 43 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g-~~VlvlE~g 43 (512)
.++||||||+|++|+++|++|+++ | .+|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~-G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW-SGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH-HCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEccC
Confidence 479999999999999999999998 9 999999993
No 37
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.13 E-value=3.8e-10 Score=120.39 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.++||||||+|++|+++|+.|+++ |.+|+|||++..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~ 298 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR-GAVVTLYCADAQ 298 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCCc
Confidence 459999999999999999999998 999999999863
No 38
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.12 E-value=5e-10 Score=111.15 Aligned_cols=35 Identities=34% Similarity=0.568 Sum_probs=33.2
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
++||||||+|++|+++|++|+++ |.+|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCC
Confidence 68999999999999999999998 999999999864
No 39
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.11 E-value=3e-10 Score=112.55 Aligned_cols=37 Identities=19% Similarity=0.406 Sum_probs=34.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+.++||||||+|++|+++|+.|+++ |.+|+|||++.
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~ 50 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGT 50 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 34579999999999999999999998 99999999986
No 40
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.11 E-value=2.1e-10 Score=117.75 Aligned_cols=55 Identities=20% Similarity=0.108 Sum_probs=44.9
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHHH
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLL 281 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL~ 281 (512)
.+.|++++++++|++|..+ + ++.+|++.+. +|+..+++|+ .||+|+|++ +..|+.
T Consensus 160 ~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~-~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 160 VRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQAR-GLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEES-CEEECCGGG-HHHHHH
T ss_pred HHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECC-EEEECCChh-HHHHHH
Confidence 4679999999999999987 5 6788988753 5776789998 699999986 566665
No 41
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.10 E-value=2.1e-10 Score=114.31 Aligned_cols=37 Identities=30% Similarity=0.446 Sum_probs=32.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
..+|||||||+|++|+++|+.|+++ |.+|+|||+.+.
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~ 61 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARA 61 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCC
Confidence 4579999999999999999999998 999999999874
No 42
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.10 E-value=6.1e-10 Score=113.16 Aligned_cols=52 Identities=13% Similarity=0.256 Sum_probs=40.4
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchh
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA 275 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~ 275 (512)
|...+ ++.|++++.+++| +|+.+ ++++.||.+.+.+| +++++ .||+|+|++.
T Consensus 125 L~~~~-~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g---~~~a~-~VVlAtGg~~ 176 (472)
T 2e5v_A 125 LLKLA-REEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGL---VEDVD-KLVLATGGYS 176 (472)
T ss_dssp HHHHH-HHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEE---ECCCS-EEEECCCCCG
T ss_pred HHHHH-HhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCC---eEEee-eEEECCCCCc
Confidence 33344 4679999999999 99988 88999998864223 47787 7999999875
No 43
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.08 E-value=1.6e-10 Score=118.44 Aligned_cols=62 Identities=21% Similarity=0.320 Sum_probs=46.4
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHH--HHHHcCC
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ--LLLLSGI 285 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~--lL~~Sgi 285 (512)
|...+ ++.|++|+++++|++|..+ ++++.+|++.+ |+ +++|+ .||+|+|+..... +|...|+
T Consensus 226 L~~~l-~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~--G~--~i~Ad-~VVlA~G~~s~~~~~~l~~~Gi 289 (549)
T 3nlc_A 226 MRATI-IELGGEIRFSTRVDDLHME-DGQITGVTLSN--GE--EIKSR-HVVLAVGHSARDTFEMLHERGV 289 (549)
T ss_dssp HHHHH-HHTTCEEESSCCEEEEEES-SSBEEEEEETT--SC--EEECS-CEEECCCTTCHHHHHHHHHTTC
T ss_pred HHHHH-HhcCCEEEeCCEEEEEEEe-CCEEEEEEECC--CC--EEECC-EEEECCCCChhhHHHHHHHcCC
Confidence 33334 4579999999999999998 88888988865 65 69998 6999999865433 4444443
No 44
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.07 E-value=5.9e-10 Score=106.57 Aligned_cols=37 Identities=38% Similarity=0.530 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhCC-CCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~-~g~~VlvlE~g~~ 45 (512)
.+|||||||+|++|+++|+.|+++ +|++|+|||++..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 368999999999999999999985 5999999999873
No 45
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.06 E-value=1.2e-09 Score=109.78 Aligned_cols=57 Identities=23% Similarity=0.237 Sum_probs=46.5
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHH
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 281 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~ 281 (512)
|...+ ++.|++|+++++|++|..+ +++++||++ +|+ +++|+ .||+|+++..+.+||.
T Consensus 202 l~~~~-~~~G~~i~~~~~V~~i~~~-~~~~~gv~~---~g~--~~~ad-~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 202 LETVI-SANGGKIHTGQEVSKILIE-NGKAAGIIA---DDR--IHDAD-LVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEE---TTE--EEECS-EEEECSCHHHHHHHTT
T ss_pred HHHHH-HHcCCEEEECCceeEEEEE-CCEEEEEEE---CCE--EEECC-EEEECCCHHHHHHhcC
Confidence 33444 5679999999999999998 888988876 355 68998 6999999988888664
No 46
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.05 E-value=8.8e-10 Score=109.48 Aligned_cols=55 Identities=25% Similarity=0.274 Sum_probs=43.6
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCc
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 273 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa 273 (512)
.+|...+ .+.|++++.+++|+.+..+ ++++++|.... +++..+++|+ .||-|.|+
T Consensus 106 ~~L~~~a-~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~-~~~~~~~~a~-~vIgAdG~ 160 (397)
T 3oz2_A 106 KHLAALA-AKAGADVWVKSPALGVIKE-NGKVAGAKIRH-NNEIVDVRAK-MVIAADGF 160 (397)
T ss_dssp HHHHHHH-HHHTCEEESSCCEEEEEEE-TTEEEEEEEEE-TTEEEEEEEE-EEEECCCT
T ss_pred HHHHHHH-HhcCcEEeeeeeeeeeeec-cceeeeeeecc-cccceEEEEe-EEEeCCcc
Confidence 4444444 4679999999999999998 89999998877 6777889996 56666664
No 47
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.03 E-value=1.7e-09 Score=106.54 Aligned_cols=35 Identities=26% Similarity=0.464 Sum_probs=33.1
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
++||||||+|++|+++|++|+++ |++|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCC
Confidence 58999999999999999999998 999999999874
No 48
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.01 E-value=1.6e-09 Score=107.86 Aligned_cols=66 Identities=23% Similarity=0.250 Sum_probs=49.4
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
.+|...+ .+.|++++.+++|++|..+ +++++||.+.+ .+...+++|+ .||.|+|... .+....|+.
T Consensus 106 ~~L~~~~-~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~-~~~~~~~~a~-~vV~A~G~~s--~~~~~~g~~ 171 (397)
T 3cgv_A 106 KHLAALA-AKAGADVWVKSPALGVIKE-NGKVAGAKIRH-NNEIVDVRAK-MVIAADGFES--EFGRWAGLK 171 (397)
T ss_dssp HHHHHHH-HHHTCEEESSCCEEEEEEE-TTEEEEEEEEE-TTEEEEEEEE-EEEECCCTTC--HHHHHHTCC
T ss_pred HHHHHHH-HhCCCEEEECCEEEEEEEe-CCEEEEEEEEE-CCeEEEEEcC-EEEECCCcch--HhHHhcCCC
Confidence 4444444 4579999999999999998 88999999876 4556689997 7999999754 444444543
No 49
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.99 E-value=1.2e-09 Score=112.37 Aligned_cols=58 Identities=24% Similarity=0.342 Sum_probs=47.6
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchh
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA 275 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~ 275 (512)
.+|...+ .+.|++|+.+++|++|..+ +++++||.+.+.+|+..+++|+ .||.|+|...
T Consensus 115 ~~L~~~a-~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad-~VI~AdG~~S 172 (512)
T 3e1t_A 115 DMLLRNS-ERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHAR-FIVDASGNRT 172 (512)
T ss_dssp HHHHHHH-HHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEE-EEEECCCTTC
T ss_pred HHHHHHH-HhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcC-EEEECCCcch
Confidence 4454444 4689999999999999998 8899999998766766789997 7999999754
No 50
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.95 E-value=3.1e-09 Score=101.01 Aligned_cols=37 Identities=35% Similarity=0.459 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHhCC-CCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~-~g~~VlvlE~g~~ 45 (512)
.+|||+|||+|++|+++|+.|+++ +|.+|+|+|+.+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 467999999999999999999975 4899999999874
No 51
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.94 E-value=3.9e-09 Score=104.77 Aligned_cols=35 Identities=31% Similarity=0.468 Sum_probs=33.3
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
+|||||||+|++|+++|+.|+++ |.+|+|||+++.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 69999999999999999999998 999999999874
No 52
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.84 E-value=1.8e-08 Score=100.98 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.++||||||+|++|+++|+.|+++ |.+|+|||+.+.
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 469999999999999999999998 999999999863
No 53
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.83 E-value=1.7e-08 Score=102.28 Aligned_cols=58 Identities=16% Similarity=0.175 Sum_probs=46.2
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchh
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIA 275 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~ 275 (512)
..|...+ .+.|++++.+++|++|..+ +++++||++.+. +|+..+++|+ .||.|.|+..
T Consensus 104 ~~L~~~a-~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad-~VV~AdG~~s 162 (453)
T 3atr_A 104 QRVLKEA-QDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSK-VVVEATGYSR 162 (453)
T ss_dssp HHHHHHH-HHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECS-EEEECCGGGC
T ss_pred HHHHHHH-HHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcC-EEEECcCCch
Confidence 3444444 4579999999999999988 889999998864 5776789998 7999999754
No 54
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.83 E-value=1.4e-08 Score=105.62 Aligned_cols=56 Identities=23% Similarity=0.210 Sum_probs=45.2
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCch
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 274 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~ 274 (512)
.+|...+ ++.|++++.+++|++|..+ ++.+.+|.+.+ +|+..+++|+ .||.|+|..
T Consensus 132 ~~L~~~a-~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~-~G~~~~i~Ad-lVV~AdG~~ 187 (591)
T 3i3l_A 132 KLLLDEA-RSRGITVHEETPVTDVDLS-DPDRVVLTVRR-GGESVTVESD-FVIDAGGSG 187 (591)
T ss_dssp HHHHHHH-HHTTCEEETTCCEEEEECC-STTCEEEEEEE-TTEEEEEEES-EEEECCGGG
T ss_pred HHHHHHH-HhCCCEEEeCCEEEEEEEc-CCCEEEEEEec-CCceEEEEcC-EEEECCCCc
Confidence 4444444 4689999999999999987 77888898886 5776789998 799999973
No 55
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.82 E-value=3.5e-09 Score=109.04 Aligned_cols=53 Identities=25% Similarity=0.503 Sum_probs=40.4
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchh
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA 275 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~ 275 (512)
.|...+.+..|++|+ +++|++|..+ +++++||.+.+ |. +++|+ .||+|+|++.
T Consensus 128 ~L~~~Le~~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~d--G~--~i~Ad-aVVLATG~~s 180 (637)
T 2zxi_A 128 YMKKVCENQENLYIK-QEEVVDIIVK-NNQVVGVRTNL--GV--EYKTK-AVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHTCTTEEEE-ESCEEEEEES-SSBEEEEEETT--SC--EEECS-EEEECCTTCB
T ss_pred HHHHHHHhCCCCEEE-EeEEEEEEec-CCEEEEEEECC--Cc--EEEeC-EEEEccCCCc
Confidence 343434133799995 7899999998 88999998755 64 68997 7999999864
No 56
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.82 E-value=3e-09 Score=109.94 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+|||||||+|++|+.+|..||+. |.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecc
Confidence 579999999999999999999998 99999999974
No 57
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.82 E-value=3.8e-08 Score=98.70 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=42.9
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHH
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 281 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~ 281 (512)
|...+ ++.|++|+++++|++|..+ ++++ | .. +|+ +++|+ .||+|+|...+.+||-
T Consensus 195 l~~~~-~~~G~~i~~~~~V~~i~~~-~~~v--V--~~-~g~--~~~ad-~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 195 LERII-MENKGKILTRKEVVEINIE-EKKV--Y--TR-DNE--EYSFD-VAISNVGVRETVKLIG 249 (421)
T ss_dssp HHHHH-HTTTCEEESSCCEEEEETT-TTEE--E--ET-TCC--EEECS-EEEECSCHHHHHHHHC
T ss_pred HHHHH-HHCCCEEEcCCeEEEEEEE-CCEE--E--Ee-CCc--EEEeC-EEEECCCHHHHHHhcC
Confidence 43444 5779999999999999988 7766 3 33 455 68998 6999999988888764
No 58
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.80 E-value=5.7e-09 Score=104.70 Aligned_cols=40 Identities=28% Similarity=0.561 Sum_probs=36.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
+.++|||||||+|++|+++|+.|+++ |++|+|||+++..+
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYYG 56 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCCC
Confidence 45689999999999999999999998 99999999998764
No 59
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.78 E-value=4.3e-09 Score=104.96 Aligned_cols=37 Identities=35% Similarity=0.642 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHhCC-CCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~-~g~~VlvlE~g~~ 45 (512)
.++||||||+|++|+++|+.|+++ +|++|+|||++..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 359999999999999999999985 5999999999853
No 60
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.77 E-value=1.8e-08 Score=105.11 Aligned_cols=70 Identities=13% Similarity=0.250 Sum_probs=49.2
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEe----cCCeE-------EEEecCcEEEEcCCchhcH--HHHH
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVN----SKGET-------VRVTANKEVILTAGAIANA--QLLL 281 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~----~~g~~-------~~v~A~k~VVlaaGa~~t~--~lL~ 281 (512)
.+|...+ ++.|++|+.+++|++|+.+++++++||.+.+ .+|+. .+++|+ .||+|.|+...- +|+.
T Consensus 148 ~~L~~~a-~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad-~VV~AdG~~S~vr~~l~~ 225 (584)
T 2gmh_A 148 SWMGEQA-EALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAK-VTIFAEGCHGHLAKQLYK 225 (584)
T ss_dssp HHHHHHH-HHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECS-EEEECCCTTCHHHHHHHH
T ss_pred HHHHHHH-HHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECC-EEEEeeCCCchHHHHHHH
Confidence 4454444 4569999999999999987347899998763 23532 479997 799999987652 4444
Q ss_pred HcCCC
Q psy1059 282 LSGIG 286 (512)
Q Consensus 282 ~Sgig 286 (512)
..|+.
T Consensus 226 ~~gl~ 230 (584)
T 2gmh_A 226 KFDLR 230 (584)
T ss_dssp HTTTT
T ss_pred HhCCC
Confidence 44543
No 61
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.73 E-value=5.5e-08 Score=99.47 Aligned_cols=39 Identities=28% Similarity=0.399 Sum_probs=35.3
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 6 KSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 6 ~~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.+.+++||||||+|++|+++|..|+++ |.+|+||||.+.
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~ 45 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLVE 45 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCCC
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 456789999999999999999999998 999999999863
No 62
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.72 E-value=1.5e-08 Score=98.61 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHhC---CCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSE---VSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~---~~g~~VlvlE~g~~ 45 (512)
+||+|||+|++|+++|+.|++ + |.+|+|+||++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCCC
Confidence 699999999999999999999 7 999999999864
No 63
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.72 E-value=1.9e-07 Score=96.65 Aligned_cols=36 Identities=28% Similarity=0.416 Sum_probs=33.9
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.++||||||+|++|+++|+.|+++ |.+|+||||.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 479999999999999999999998 999999999874
No 64
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.71 E-value=1.4e-07 Score=94.40 Aligned_cols=65 Identities=15% Similarity=0.234 Sum_probs=53.3
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
.++...+ ++.|+++++++.|++|..+ ++++++|++.+ |+ ++.++ .||+|+|..-+..++..+|+.
T Consensus 198 ~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~d--G~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 198 EFYQAEH-RAHGVDLRTGAAMDCIEGD-GTKVTGVRMQD--GS--VIPAD-IVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHH-HHTTCEEEETCCEEEEEES-SSBEEEEEESS--SC--EEECS-EEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHHH-HhCCCEEEECCEEEEEEec-CCcEEEEEeCC--CC--EEEcC-EEEECCCCccChHHHHhCCCC
Confidence 3444555 6789999999999999987 78898998866 65 68998 799999988888888888764
No 65
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.70 E-value=7.6e-08 Score=96.76 Aligned_cols=36 Identities=36% Similarity=0.556 Sum_probs=33.4
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
.|||||||+|++|+++|++|+++ |++|+|||+.+..
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERL 36 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCc
Confidence 38999999999999999999998 9999999997754
No 66
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.70 E-value=5.5e-08 Score=94.26 Aligned_cols=35 Identities=26% Similarity=0.360 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
++||||||+|++|+++|+.|+++ |.+|+|||+.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCCC
Confidence 47999999999999999999998 999999999874
No 67
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.70 E-value=7e-08 Score=98.67 Aligned_cols=38 Identities=29% Similarity=0.382 Sum_probs=34.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.+.++||||||+|++|+++|..|+++ |.+|+||||.+.
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~ 46 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLPQ 46 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCSS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCC
Confidence 45789999999999999999999998 999999999863
No 68
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.69 E-value=1.5e-08 Score=104.72 Aligned_cols=37 Identities=35% Similarity=0.561 Sum_probs=33.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
...+|||||||+|++|+.+|..||+. |.+|+|||+..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~ 54 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDL 54 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecc
Confidence 34579999999999999999999998 99999999974
No 69
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.68 E-value=6.8e-08 Score=100.23 Aligned_cols=36 Identities=25% Similarity=0.381 Sum_probs=31.7
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.+|||||||+|++|+++|+.|+++ |.+|+|||+.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCC
Confidence 469999999999999999999998 999999999864
No 70
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.62 E-value=7.9e-08 Score=93.11 Aligned_cols=56 Identities=11% Similarity=0.210 Sum_probs=45.7
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
+..|+++++++.|.+|..+ ++++.+|++.+. +|+..++.++ .||+|+|...++.++
T Consensus 220 ~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGD-GKLLNALRIKNTKKNEETDLPVS-GLFYAIGHTPATKIV 276 (338)
T ss_dssp HCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTTEEEEEECS-EEEECSCEEECCGGG
T ss_pred hcCCeEEeecceeEEEEcc-cCcEEEEEEEECCCCceEEEEeC-EEEEEeCCCCChhHh
Confidence 4469999999999999988 788999999874 5666789998 799999976555444
No 71
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.62 E-value=1e-07 Score=96.89 Aligned_cols=37 Identities=22% Similarity=0.295 Sum_probs=34.1
Q ss_pred cccEEEECCChhHHHHHHHHhCCCC------CeEEEEcCcCCCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSS------LKVLLIEAGGDTP 47 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g------~~VlvlE~g~~~~ 47 (512)
.+||||||+|++|+++|++|+++ | .+|+|||+.+..+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCCC
Confidence 58999999999999999999998 8 9999999987653
No 72
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.61 E-value=2e-07 Score=95.12 Aligned_cols=61 Identities=21% Similarity=0.359 Sum_probs=44.1
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHH--HHHcCC
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGI 285 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~l--L~~Sgi 285 (512)
+...+ ++.|++++++++|++|..+ ++++ .|++. +|+ ++.++ .||+|+|...+..+ |...|+
T Consensus 238 l~~~l-~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~--~g~--~i~aD-~Vi~A~G~~p~~~~l~l~~~g~ 300 (484)
T 3o0h_A 238 LNDAM-VAKGISIIYEATVSQVQST-ENCY-NVVLT--NGQ--TICAD-RVMLATGRVPNTTGLGLERAGV 300 (484)
T ss_dssp HHHHH-HHHTCEEESSCCEEEEEEC-SSSE-EEEET--TSC--EEEES-EEEECCCEEECCTTCCHHHHTC
T ss_pred HHHHH-HHCCCEEEeCCEEEEEEee-CCEE-EEEEC--CCc--EEEcC-EEEEeeCCCcCCCCCChhhcCc
Confidence 44444 5679999999999999887 5554 45543 364 68898 69999997665555 555665
No 73
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.59 E-value=6.4e-08 Score=96.25 Aligned_cols=36 Identities=25% Similarity=0.466 Sum_probs=33.5
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.++||||||+|++|+++|..|+++ |.+|+|||+.+.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~~ 40 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQARR 40 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCC
Confidence 469999999999999999999998 999999999863
No 74
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.59 E-value=3.7e-08 Score=94.44 Aligned_cols=61 Identities=13% Similarity=0.210 Sum_probs=48.1
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
+...+ ++.|+++++++.|.+|..+ ++++.+|++...+|+..++.++ .||+|+|...++.++
T Consensus 189 ~~~~~-~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~ 249 (315)
T 3r9u_A 189 VEKVK-KNEKIELITSASVDEVYGD-KMGVAGVKVKLKDGSIRDLNVP-GIFTFVGLNVRNEIL 249 (315)
T ss_dssp HHHHH-HCTTEEEECSCEEEEEEEE-TTEEEEEEEECTTSCEEEECCS-CEEECSCEEECCGGG
T ss_pred HHHHH-hcCCeEEEeCcEEEEEEcC-CCcEEEEEEEcCCCCeEEeecC-eEEEEEcCCCCchhh
Confidence 33444 5789999999999999887 7789999988435877789998 699999975544444
No 75
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.59 E-value=1.9e-07 Score=96.11 Aligned_cols=68 Identities=21% Similarity=0.338 Sum_probs=49.3
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHH-HHHHcCCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ-LLLLSGIG 286 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~-lL~~Sgig 286 (512)
.+...+ ++.|++++++++|++|..+++++++++.+...+|+ .++.++ .||+|+|..-+.. +|..+|+.
T Consensus 260 ~l~~~l-~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~-~~i~aD-~Vv~A~G~~p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 260 YVLDRM-KEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGE-MRIETD-FVFLGLGEQPRSAELAKILGLD 328 (523)
T ss_dssp HHHHHH-HHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEE-EEEECS-CEEECCCCEECCHHHHHHHTCC
T ss_pred HHHHHH-HhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCc-EEEEcC-EEEECcCCccCCccCHHHcCCc
Confidence 344445 57899999999999998753556655655543453 468998 6999999877766 67777763
No 76
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.58 E-value=3.7e-07 Score=87.66 Aligned_cols=66 Identities=23% Similarity=0.296 Sum_probs=51.8
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
++..+. ++.|+++++++.|.++..+ +++.+|++.+. +|+..++.++ .||+|+|...+..+|..+|+
T Consensus 195 ~~~~~~-~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 195 YVETVK-KKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVN-GVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HHHHHH-TCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECS-EEEECCCEECCHHHHHHTTC
T ss_pred HHHHHH-hCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcC-EEEEEECCCCChhHHhhcCe
Confidence 344445 5679999999999999865 56778888763 5777789998 79999998777778887775
No 77
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.56 E-value=3.7e-08 Score=100.69 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=34.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
...+||+|||+|++|+++|..|++. |.+|+|||+.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEeccc
Confidence 4579999999999999999999998 999999999863
No 78
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.55 E-value=9e-08 Score=93.39 Aligned_cols=34 Identities=18% Similarity=0.426 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+|||+|||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCC
Confidence 58999999999999999999998 99999999986
No 79
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.54 E-value=1.3e-07 Score=94.14 Aligned_cols=65 Identities=17% Similarity=0.332 Sum_probs=53.1
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
..+...+ ++.|+++++++.|++|..+ ++++.+|++.+ |+ ++.++ .||+|+|..-++.++..+|+.
T Consensus 188 ~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~d--G~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 188 SYFHDRH-SGAGIRMHYGVRATEIAAE-GDRVTGVVLSD--GN--TLPCD-LVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHH-HHTTCEEECSCCEEEEEEE-TTEEEEEEETT--SC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHH-HhCCcEEEECCEEEEEEec-CCcEEEEEeCC--CC--EEEcC-EEEECcCCccCHHHHHhCCCC
Confidence 3444555 6789999999999999987 78888888765 65 68998 799999988778888888764
No 80
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.50 E-value=6.2e-08 Score=90.95 Aligned_cols=36 Identities=25% Similarity=0.364 Sum_probs=33.5
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
++||+|||||++|+++|+.|+++ |.+|+||||.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCC
Confidence 47999999999999999999998 9999999998754
No 81
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.50 E-value=1.7e-07 Score=95.54 Aligned_cols=36 Identities=28% Similarity=0.377 Sum_probs=33.4
Q ss_pred cccEEEECCChhHHHHHHHHhCCCC--CeEEEEcCcCCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSS--LKVLLIEAGGDT 46 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g--~~VlvlE~g~~~ 46 (512)
.+||||||+|++|+++|++|+++ | .+|+|||+.+..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCC
Confidence 58999999999999999999998 8 999999997764
No 82
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.50 E-value=1.3e-07 Score=99.79 Aligned_cols=37 Identities=27% Similarity=0.477 Sum_probs=34.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhC-CCCCeEEEEcCcCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSE-VSSLKVLLIEAGGD 45 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~-~~g~~VlvlE~g~~ 45 (512)
..++||||||+|++|+++|..|++ . |.+|+||||.+.
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~~ 67 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKEG 67 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 457999999999999999999999 8 999999999863
No 83
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.49 E-value=9.2e-07 Score=91.60 Aligned_cols=36 Identities=25% Similarity=0.353 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.++||||||+|++|+++|..|+++ |.+|+||||.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~~ 60 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTDG 60 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 469999999999999999999998 999999999863
No 84
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.49 E-value=5.2e-07 Score=91.55 Aligned_cols=37 Identities=35% Similarity=0.460 Sum_probs=34.2
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCC-----CeEEEEcCcCCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSS-----LKVLLIEAGGDT 46 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g-----~~VlvlE~g~~~ 46 (512)
+.|||||||+|++|+++|..|++. | .+|+|||+.+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~~ 70 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGDY 70 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCCC
Confidence 579999999999999999999998 8 999999998853
No 85
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.45 E-value=4.8e-07 Score=87.26 Aligned_cols=35 Identities=26% Similarity=0.268 Sum_probs=33.0
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
..+||+|||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 40 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLP 40 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCC
Confidence 468999999999999999999998 99999999986
No 86
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.40 E-value=1.5e-06 Score=83.37 Aligned_cols=61 Identities=15% Similarity=0.221 Sum_probs=46.5
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-C-CeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-K-GETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~-g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
+...+ ++.|++++++++|++|..+ ++++.+|++.+. + |+..++.++ .||+|+|.-.++.++
T Consensus 190 l~~~l-~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 190 LMDKV-ENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVA-GLFVAIGHSPNTAIF 252 (320)
T ss_dssp HHHHH-HTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECS-EEEECSCEEESCGGG
T ss_pred HHHhc-ccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcC-EEEEEeCCCCChHHh
Confidence 33334 5789999999999999877 678889998763 2 555679998 799999976555444
No 87
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.38 E-value=9.9e-07 Score=89.50 Aligned_cols=35 Identities=31% Similarity=0.540 Sum_probs=32.6
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCC
Confidence 369999999999999999999998 99999999764
No 88
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.38 E-value=8.4e-07 Score=91.58 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=33.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
...+||||||+|++|+.+|.+|++. |.+|+|||+++
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~ 54 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAAS 54 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 3569999999999999999999997 99999999986
No 89
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.37 E-value=4.8e-07 Score=93.35 Aligned_cols=37 Identities=35% Similarity=0.548 Sum_probs=33.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
..++||||||+|++|+.+|.+|++. |.+|+|||+++.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~~ 43 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGED 43 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 4579999999999999999999997 999999999863
No 90
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.37 E-value=5.6e-07 Score=92.70 Aligned_cols=36 Identities=19% Similarity=0.400 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHh-CCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLS-EVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La-~~~g~~VlvlE~g~~ 45 (512)
.++||||||+|++|+.+|.+|+ +. |.+|+|||+.+.
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~~ 43 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKADG 43 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCCC
Confidence 4699999999999999999999 87 999999999863
No 91
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.36 E-value=1.5e-07 Score=96.82 Aligned_cols=43 Identities=16% Similarity=0.350 Sum_probs=37.2
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCC
Q psy1059 6 KSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI 48 (512)
Q Consensus 6 ~~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~ 48 (512)
..+..+||||||||++||+||++|+++.|.+|+|||+.+..++
T Consensus 6 ~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 6 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 3455799999999999999999999744999999999987654
No 92
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.35 E-value=5.6e-07 Score=90.31 Aligned_cols=64 Identities=22% Similarity=0.340 Sum_probs=49.7
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEe--cCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVII--NDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~--~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
.+...+ ++.|+++++++.|++|.. + ++++.+|++.+ |+ ++.++ .||+|+|..-+..++..+|+.
T Consensus 196 ~l~~~l-~~~GV~i~~~~~v~~i~~~~~-~~~v~~v~~~~--G~--~i~~D-~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 196 FYEHLH-REAGVDIRTGTQVCGFEMSTD-QQKVTAVLCED--GT--RLPAD-LVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHH-HHHTCEEECSCCEEEEEECTT-TCCEEEEEETT--SC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHH-HhCCeEEEeCCEEEEEEeccC-CCcEEEEEeCC--CC--EEEcC-EEEECCCCCcCcchhhccCCC
Confidence 344444 577999999999999987 5 67787887754 65 68898 799999987666788887763
No 93
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.34 E-value=6.8e-07 Score=90.91 Aligned_cols=64 Identities=22% Similarity=0.229 Sum_probs=48.7
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
..+...+ ++.|++++++++|++|..+ +++++ |.+.+ |+ ++.++ .||+|+|...++.|+..+|+.
T Consensus 206 ~~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~v~-v~~~~--g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 269 (472)
T 3iwa_A 206 QMLRHDL-EKNDVVVHTGEKVVRLEGE-NGKVA-RVITD--KR--TLDAD-LVILAAGVSPNTQLARDAGLE 269 (472)
T ss_dssp HHHHHHH-HHTTCEEECSCCEEEEEES-SSBEE-EEEES--SC--EEECS-EEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHH-HhcCCEEEeCCEEEEEEcc-CCeEE-EEEeC--CC--EEEcC-EEEECCCCCcCHHHHHhCCcc
Confidence 3444455 6789999999999999886 66665 55554 65 68998 699999987776777777753
No 94
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.33 E-value=2.4e-07 Score=88.37 Aligned_cols=35 Identities=20% Similarity=0.312 Sum_probs=32.5
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
++|||||||||++|++||.+|+++ |++|+|+|++.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~ 39 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNT 39 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 469999999999999999999998 99999999975
No 95
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.31 E-value=3.8e-07 Score=92.17 Aligned_cols=42 Identities=26% Similarity=0.380 Sum_probs=37.8
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCC
Q psy1059 6 KSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI 48 (512)
Q Consensus 6 ~~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~ 48 (512)
.+..++||||||+|++|+++|.+|+++ |++|+|||+.+..++
T Consensus 7 ~~~~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 7 TIDTDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGG 48 (453)
T ss_dssp CCCCBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCG
T ss_pred hccccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCCc
Confidence 345789999999999999999999998 999999999987643
No 96
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.31 E-value=2.9e-07 Score=88.15 Aligned_cols=36 Identities=28% Similarity=0.341 Sum_probs=33.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
++.|||||||+|++|++||.+|++. |++|+|+|++.
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~-g~~v~liE~~~ 37 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRS-SLKPVMYEGFM 37 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 4579999999999999999999998 99999999975
No 97
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.29 E-value=4e-07 Score=87.15 Aligned_cols=35 Identities=43% Similarity=0.508 Sum_probs=32.9
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+|||||||+|++|++||.+|++. |++|+|+|++.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~-g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA-NLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 379999999999999999999998 99999999965
No 98
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.28 E-value=5.7e-07 Score=86.73 Aligned_cols=39 Identities=33% Similarity=0.394 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhC-CCCCeEEEEcCcCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSE-VSSLKVLLIEAGGDT 46 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~-~~g~~VlvlE~g~~~ 46 (512)
..++||+|||||++|++||++|++ +.|++|+|+|+++..
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 357899999999999999999984 249999999998754
No 99
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.26 E-value=5.1e-06 Score=84.09 Aligned_cols=64 Identities=11% Similarity=0.146 Sum_probs=43.1
Q ss_pred hhhhcccCCCCCEE--EEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 215 AYLTPIAGKRTNLY--VLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 215 ~~l~~~~~~~~g~~--v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
.|+...+ ++.|++ ++++++|++|..++++....|++.+. +|+..++.++ .||+|+|.+..|++.
T Consensus 105 ~~l~~~~-~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d-~VVvAtG~~s~p~~p 171 (464)
T 2xve_A 105 DYIKGRV-EKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFD-YVVCCTGHFSTPYVP 171 (464)
T ss_dssp HHHHHHH-HHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEES-EEEECCCSSSSBCCC
T ss_pred HHHHHHH-HHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcC-EEEECCCCCCCCccC
Confidence 4555444 455776 88999999998872221234555552 4655678998 699999987666654
No 100
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.20 E-value=9.1e-07 Score=86.67 Aligned_cols=37 Identities=14% Similarity=0.150 Sum_probs=34.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
..++||||||+|++|+++|++|+++ |.+|+|||+...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARK-GYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccCC
Confidence 4579999999999999999999998 999999999863
No 101
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.19 E-value=9.2e-07 Score=88.10 Aligned_cols=38 Identities=21% Similarity=0.247 Sum_probs=33.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
..+.|||||||+|++|+++|+.|+++ |.+|+||||.+.
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~~ 57 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVKE 57 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 45679999999999999999999998 999999999863
No 102
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.12 E-value=1.4e-06 Score=86.30 Aligned_cols=41 Identities=24% Similarity=0.386 Sum_probs=36.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
+.+++||||||+|++|+++|++|++++|.+|+|||+.+..+
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 34579999999999999999999985489999999998653
No 103
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.12 E-value=4.7e-06 Score=82.84 Aligned_cols=33 Identities=30% Similarity=0.456 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.|+|||+|++|+++|..|+++ |.+|+|+||.+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 599999999999999999998 999999999763
No 104
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.07 E-value=2.3e-06 Score=85.27 Aligned_cols=64 Identities=19% Similarity=0.191 Sum_probs=49.8
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
..+...+ ++.|+++++++.|.+|..+ + ++.+|++.+ |+ ++.++ .||+|+|..-++.++..+|+.
T Consensus 189 ~~l~~~l-~~~GV~i~~~~~v~~i~~~-~-~~~~v~~~d--g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 189 AWLRGLL-TELGVQVELGTGVVGFSGE-G-QLEQVMASD--GR--SFVAD-SALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHHH-HHHTCEEECSCCEEEEECS-S-SCCEEEETT--SC--EEECS-EEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHH-HHCCCEEEeCCEEEEEecc-C-cEEEEEECC--CC--EEEcC-EEEEeeCCeecHHHHHhCCCc
Confidence 3444445 5789999999999999765 4 666777755 65 68898 799999988777888888764
No 105
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.04 E-value=2.7e-06 Score=77.58 Aligned_cols=34 Identities=26% Similarity=0.404 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+|||||||+|++|+.+|..|++. |.+|+|||++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCC
Confidence 58999999999999999999998 99999999974
No 106
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.03 E-value=3.3e-06 Score=82.95 Aligned_cols=38 Identities=39% Similarity=0.615 Sum_probs=35.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
...+||+|||+|++|+++|++|+++ |.+|+|||+.+..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCC
Confidence 4579999999999999999999998 9999999998765
No 107
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.01 E-value=3.1e-06 Score=86.24 Aligned_cols=62 Identities=18% Similarity=0.184 Sum_probs=44.3
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
.+...+ ++.|+++++++.|.+|..++++++ .|++.+. +|+..++.++ .||+|+|.--+..+|
T Consensus 232 ~l~~~l-~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D-~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 232 LVAASM-EERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYD-TVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHHHHH-HHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEES-EEEECSCEEECCGGG
T ss_pred HHHHHH-HhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcC-EEEECcccccCcCcC
Confidence 344445 578999999999999987623333 4777663 3556689999 699999976555554
No 108
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.00 E-value=4.4e-06 Score=83.57 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=35.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCC-CeEEEEcCcCCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDTP 47 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g-~~VlvlE~g~~~~ 47 (512)
.+.+||||||||++|+++|++|+++ | .+|+|+|+.+..+
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHVG 43 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCCC
Confidence 4568999999999999999999998 9 9999999988763
No 109
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.00 E-value=3.9e-06 Score=85.46 Aligned_cols=41 Identities=17% Similarity=0.330 Sum_probs=33.9
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 6 KSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 6 ~~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
+....+||||||+|++|+++|+.|+++ |.+|+|||+.+..+
T Consensus 12 ~~~~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 12 PRTTGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLG 52 (478)
T ss_dssp -----CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSSB
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCC
Confidence 345578999999999999999999998 99999999988653
No 110
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.99 E-value=4.5e-06 Score=82.83 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=34.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
..++||||||+|++|+++|..|+++ |.+|+|||+.+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 3568999999999999999999998 999999999864
No 111
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.98 E-value=4.1e-06 Score=81.96 Aligned_cols=36 Identities=42% Similarity=0.598 Sum_probs=33.6
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
++||+|||+|++|+++|++|+++ |.+|+|+|+++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHI 36 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCC
Confidence 47999999999999999999998 9999999998765
No 112
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.98 E-value=4e-06 Score=86.30 Aligned_cols=37 Identities=27% Similarity=0.494 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
..+||||||||++|+++|++|+++ |++|+|||+.+..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRV 39 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCC
Confidence 468999999999999999999998 9999999998875
No 113
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.96 E-value=5.1e-06 Score=84.99 Aligned_cols=37 Identities=27% Similarity=0.465 Sum_probs=34.2
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
++||||||+|++|+++|++|+++ |.+|+|||+.+..+
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~G 75 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRIG 75 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBSB
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCCC
Confidence 38999999999999999999998 99999999987653
No 114
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.96 E-value=5.7e-06 Score=84.80 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=34.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
.+.+||||||+|++|+++|++|+++ |++|+|||+.+..+
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~G 49 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAG 49 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCC
Confidence 4569999999999999999999998 99999999998763
No 115
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.95 E-value=4.9e-06 Score=81.29 Aligned_cols=65 Identities=18% Similarity=0.175 Sum_probs=47.8
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcC
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSG 284 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sg 284 (512)
+.... ++.|++++++++|++|..+ ++++.+|.+...+|+..++.++ .||+|+|.-.++.+|..++
T Consensus 208 l~~~~-~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 208 VERAR-ANGTIDVYLETEVASIEES-NGVLTRVHLRSSDGSKWTVEAD-RLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp SHHHH-HHTSEEEESSEEEEEEEEE-TTEEEEEEEEETTCCEEEEECS-EEEECCCBCCSCGGGGGSS
T ss_pred HHHHh-hcCceEEEcCcCHHHhccC-CCceEEEEEEecCCCeEEEeCC-EEEECCCCCCCHHHHHhhc
Confidence 43334 4678999999999999887 7888888887335766689998 7999999654444554443
No 116
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.95 E-value=3.6e-06 Score=85.59 Aligned_cols=36 Identities=36% Similarity=0.547 Sum_probs=33.9
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
++|||||||+|++|+++|.+|++. |++|+|||+++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCCc
Confidence 579999999999999999999998 999999999873
No 117
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.94 E-value=6.6e-06 Score=83.98 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=36.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI 48 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~ 48 (512)
..+.+||+|||+|++|+++|++|+++ |.+|+|||+.+..+.
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPGG 48 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCT
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCCC
Confidence 34578999999999999999999998 999999999987643
No 118
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.93 E-value=7.9e-06 Score=79.59 Aligned_cols=39 Identities=33% Similarity=0.444 Sum_probs=35.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCc-CCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG-GDT 46 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g-~~~ 46 (512)
....+||+|||+|++|+++|++|+++ |.+|+|||+. +..
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRV 80 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHC-CCcEEEEecccccc
Confidence 34578999999999999999999998 9999999998 654
No 119
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.93 E-value=7.2e-06 Score=82.20 Aligned_cols=41 Identities=22% Similarity=0.364 Sum_probs=36.7
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI 48 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~ 48 (512)
+..++||||||+|++|+++|.+|+++ |++|+|||+.+..+.
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg 43 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYGG 43 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCccc
Confidence 34579999999999999999999998 999999999987643
No 120
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.93 E-value=6.5e-06 Score=83.73 Aligned_cols=36 Identities=22% Similarity=0.392 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcCCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGGDTP 47 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~~~~ 47 (512)
+||||||||++|+++|++|+++ |. +|+|||+.+..+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCCC
Confidence 6999999999999999999998 99 999999987653
No 121
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.93 E-value=6.2e-06 Score=84.58 Aligned_cols=35 Identities=20% Similarity=0.367 Sum_probs=32.9
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
+||+||||+|++|.++|.++|+. |+||+|||+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~-G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAH-GARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-TCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecccc
Confidence 59999999999999999999998 999999998763
No 122
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.92 E-value=5.6e-06 Score=79.36 Aligned_cols=37 Identities=30% Similarity=0.419 Sum_probs=33.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+..++||+|||+|++|+++|..|+++ |++|+|||+..
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 49 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARS-GFSVAILDKAV 49 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCC
Confidence 34579999999999999999999998 99999999953
No 123
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.91 E-value=5.7e-06 Score=82.41 Aligned_cols=35 Identities=31% Similarity=0.466 Sum_probs=33.0
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCe-EEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLK-VLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~-VlvlE~g~~ 45 (512)
.+||||||+|++|+++|..|+++ |.+ |+|||+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCC
Confidence 58999999999999999999998 999 999999864
No 124
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.91 E-value=5e-06 Score=82.30 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
++||||||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC
Confidence 58999999999999999999998 99999999976
No 125
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.91 E-value=7.2e-06 Score=80.74 Aligned_cols=35 Identities=23% Similarity=0.190 Sum_probs=33.1
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.+||||||+|++|+++|..|+++ |.+|+|||+.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCC
Confidence 58999999999999999999998 999999999874
No 126
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.90 E-value=5.6e-06 Score=85.12 Aligned_cols=38 Identities=29% Similarity=0.344 Sum_probs=35.0
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCC-CeEEEEcCcCCCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDTP 47 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g-~~VlvlE~g~~~~ 47 (512)
..+||||||||++|++||++|+++ | .+|+|||+.+..+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCC
Confidence 468999999999999999999998 9 9999999998764
No 127
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.90 E-value=7.3e-06 Score=82.99 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=32.5
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+|||||||+|++|+++|.+|+++ |++|+|||++.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~-G~~V~liEk~~ 38 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL-GKKVAIAEEFR 38 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCC
Confidence 469999999999999999999998 99999999943
No 128
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.88 E-value=7e-06 Score=83.80 Aligned_cols=66 Identities=20% Similarity=0.266 Sum_probs=46.5
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHH--HHHcCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQL--LLLSGI 285 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~l--L~~Sgi 285 (512)
.+...+ ++.|++++++++|.++..+ ++.+ .|.+.+. +|+..++.++ .||+|+|..-+..+ |..+|+
T Consensus 244 ~l~~~l-~~~gV~v~~~~~v~~i~~~-~~~~-~v~~~~~~~g~~~~i~~D-~Vi~a~G~~p~~~~l~l~~~g~ 312 (491)
T 3urh_A 244 QLQRML-TKQGIDFKLGAKVTGAVKS-GDGA-KVTFEPVKGGEATTLDAE-VVLIATGRKPSTDGLGLAKAGV 312 (491)
T ss_dssp HHHHHH-HHTTCEEECSEEEEEEEEE-TTEE-EEEEEETTSCCCEEEEES-EEEECCCCEECCTTSCHHHHTC
T ss_pred HHHHHH-HhCCCEEEECCeEEEEEEe-CCEE-EEEEEecCCCceEEEEcC-EEEEeeCCccCCCccCchhcCc
Confidence 344445 5789999999999999876 5443 3566543 2655689998 69999997655554 556665
No 129
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.87 E-value=4.5e-06 Score=81.26 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=31.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCC------CeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSS------LKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g------~~VlvlE~g~~ 45 (512)
||||||+|++|+++|++|+++ | .+|+|||++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCCC
Confidence 899999999999999999998 7 99999999863
No 130
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.87 E-value=9.3e-06 Score=80.46 Aligned_cols=36 Identities=25% Similarity=0.262 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
..+||+|||+|++|+++|..|+++ |.+|+|+|+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCC
Confidence 358999999999999999999998 999999999863
No 131
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.87 E-value=8.4e-06 Score=82.32 Aligned_cols=38 Identities=34% Similarity=0.376 Sum_probs=34.8
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
.++||||||+|++|+++|++|+++ |++|+|||+.+..+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCC
Confidence 368999999999999999999998 99999999987653
No 132
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.86 E-value=9.5e-06 Score=83.33 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=34.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+..+|||||||+|++|+++|.+|++. |++|+|||+.+
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~-G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQY-GKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeccC
Confidence 34579999999999999999999998 99999999965
No 133
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.85 E-value=9.3e-06 Score=70.68 Aligned_cols=33 Identities=36% Similarity=0.646 Sum_probs=31.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
||++|||+|++|+.+|..|++. |.+|+|||+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 7999999999999999999998 99999999986
No 134
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.84 E-value=2e-05 Score=78.97 Aligned_cols=62 Identities=15% Similarity=0.169 Sum_probs=45.3
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
.++...+ ++.|+++++++.|+++.- + ++.+.+.+|+..++.++ .||+++|.-. +.++..++.
T Consensus 204 ~~l~~~l-~~~GV~~~~~~~v~~v~~---~---~~~~~~~~g~~~~i~~d-~vi~~~G~~~-~~~~~~~~~ 265 (430)
T 3hyw_A 204 RLVEDLF-AERNIDWIANVAVKAIEP---D---KVIYEDLNGNTHEVPAK-FTMFMPSFQG-PEVVASAGD 265 (430)
T ss_dssp HHHHHHH-HHTTCEEECSCEEEEECS---S---EEEEECTTSCEEEEECS-EEEEECEEEC-CHHHHTTCT
T ss_pred HHHHHHH-HhCCeEEEeCceEEEEeC---C---ceEEEeeCCCceEeecc-eEEEeccCCC-chHHHhccc
Confidence 4455555 678999999999999843 3 35555556777789998 7999999543 567777764
No 135
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.83 E-value=7.2e-06 Score=83.44 Aligned_cols=36 Identities=19% Similarity=0.440 Sum_probs=33.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
..+|||||||+|++|+++|.+|++. |++|+|||++.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 3469999999999999999999998 99999999875
No 136
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.83 E-value=7.8e-06 Score=81.90 Aligned_cols=34 Identities=29% Similarity=0.211 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+||||||+|++|+++|..|+++ |.+|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 48999999999999999999998 99999999976
No 137
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.82 E-value=9.7e-06 Score=77.89 Aligned_cols=55 Identities=16% Similarity=0.315 Sum_probs=41.9
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
++.|++++++++|++|..+ +++.+|++.+. +|+..++.++ .||+|+|.-.++.+|
T Consensus 199 ~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 199 ANPKMKFIWDTAVEEIQGA--DSVSGVKLRNLKTGEVSELATD-GVFIFIGHVPNTAFV 254 (325)
T ss_dssp TCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred hcCCceEecCCceEEEccC--CcEEEEEEEECCCCcEEEEEcC-EEEEccCCCCChHHH
Confidence 4579999999999999864 56778888742 5766778998 799999965444444
No 138
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.82 E-value=1e-05 Score=76.48 Aligned_cols=34 Identities=41% Similarity=0.637 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|||+|||+|++|+++|.+|+++ |.+|+|+|+++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCC
Confidence 48999999999999999999998 99999999975
No 139
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.81 E-value=1.1e-05 Score=83.39 Aligned_cols=36 Identities=31% Similarity=0.399 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhC---CCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSE---VSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~---~~g~~VlvlE~g~~ 45 (512)
..+||||||+|++|+++|+.|++ . |.+|+|||+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQ-QANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCS-SCEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCC-CCEEEEECCCCC
Confidence 46899999999999999999999 8 999999999653
No 140
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.81 E-value=1.1e-05 Score=82.31 Aligned_cols=64 Identities=19% Similarity=0.268 Sum_probs=44.1
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHH--HHHcCC
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGI 285 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~l--L~~Sgi 285 (512)
+...+ ++. +++++++.|+++..+ ++++. |.+.+.+|+..++.++ .||+|+|..-+..+ |..+|+
T Consensus 221 l~~~l-~~~-V~i~~~~~v~~i~~~-~~~v~-v~~~~~~G~~~~i~~D-~Vi~a~G~~p~~~~l~l~~~gl 286 (492)
T 3ic9_A 221 AEKTF-NEE-FYFDAKARVISTIEK-EDAVE-VIYFDKSGQKTTESFQ-YVLAATGRKANVDKLGLENTSI 286 (492)
T ss_dssp HHHHH-HTT-SEEETTCEEEEEEEC-SSSEE-EEEECTTCCEEEEEES-EEEECSCCEESCSSSCGGGSCC
T ss_pred HHHHH-hhC-cEEEECCEEEEEEEc-CCEEE-EEEEeCCCceEEEECC-EEEEeeCCccCCCCCChhhcCC
Confidence 33444 445 999999999999887 55544 5554335766689999 79999997655555 444443
No 141
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.79 E-value=1.2e-05 Score=77.46 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
..+||+|||+|++|+++|.+|+++ |.+|+|+|+.+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~ 39 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDPLPE 39 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCC
Confidence 469999999999999999999998 999999999864
No 142
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.79 E-value=1.2e-05 Score=82.08 Aligned_cols=61 Identities=15% Similarity=0.149 Sum_probs=43.3
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHH
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQL 279 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~l 279 (512)
.+...+ ++.|+++++++.|.+|...+++. ..|++.+. +|+..++.++ .||+|+|..-+..+
T Consensus 230 ~l~~~l-~~~gv~~~~~~~v~~i~~~~~~~-~~v~~~~~~~g~~~~~~~D-~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 230 LVTEHM-ESHGTQFLKGCVPSHIKKLPTNQ-LQVTWEDHASGKEDTGTFD-TVLWAIGRVPETRT 291 (488)
T ss_dssp HHHHHH-HHTTCEEEETEEEEEEEECTTSC-EEEEEEETTTTEEEEEEES-EEEECSCEEESCGG
T ss_pred HHHHHH-HHCCCEEEeCCEEEEEEEcCCCc-EEEEEEeCCCCeeEEEECC-EEEEcccCCcccCc
Confidence 344445 57899999999999998752333 34666553 3666678998 69999997655555
No 143
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.78 E-value=1.4e-05 Score=80.59 Aligned_cols=35 Identities=31% Similarity=0.426 Sum_probs=33.0
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
++|||||||+|++|+++|.+|++. |.+|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY-GQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCCC
Confidence 479999999999999999999997 99999999974
No 144
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.77 E-value=1.4e-05 Score=80.92 Aligned_cols=35 Identities=29% Similarity=0.551 Sum_probs=33.0
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
++|||||||+|++|+++|.+|++. |.+|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCCC
Confidence 579999999999999999999997 99999999974
No 145
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.77 E-value=1.5e-05 Score=76.68 Aligned_cols=34 Identities=29% Similarity=0.277 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
+||||||+|.+|+.+|..|+++ |.+|+|+|+.+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCC
Confidence 6999999999999999999998 999999999874
No 146
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.75 E-value=3.1e-05 Score=78.03 Aligned_cols=37 Identities=32% Similarity=0.396 Sum_probs=34.0
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcCCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGGDT 46 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~~~ 46 (512)
..+||+|||+|++|+++|..|++. |. +|+|+|+.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGSP 43 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCCC
Confidence 468999999999999999999998 99 99999998654
No 147
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.74 E-value=1.5e-05 Score=81.00 Aligned_cols=36 Identities=28% Similarity=0.512 Sum_probs=33.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
..+|||||||+|++|+++|.+|++. |.+|+|+|++.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 3479999999999999999999998 99999999975
No 148
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.73 E-value=1.8e-05 Score=80.46 Aligned_cols=38 Identities=29% Similarity=0.276 Sum_probs=34.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCC-CeEEEEcCcCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDT 46 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g-~~VlvlE~g~~~ 46 (512)
...+||+|||+|++|+++|++|+++ | .+|+|+|+.+..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCC
Confidence 4578999999999999999999998 8 899999999865
No 149
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.72 E-value=1.9e-05 Score=79.95 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=33.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
..++||||||+|++|+++|.+|++. |.+|+|||++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~ 37 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERGT 37 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 3469999999999999999999998 99999999984
No 150
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.71 E-value=2.5e-05 Score=76.92 Aligned_cols=37 Identities=30% Similarity=0.455 Sum_probs=34.0
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
++||+|||+|++|+++|++|+++ |.+|+|+|+.+..+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCcC
Confidence 47999999999999999999998 99999999987653
No 151
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.71 E-value=1.7e-05 Score=80.36 Aligned_cols=65 Identities=17% Similarity=0.220 Sum_probs=45.7
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecC--CeEEEEecCcEEEEcCCchhcHHH--HHHcCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSK--GETVRVTANKEVILTAGAIANAQL--LLLSGI 285 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~--g~~~~v~A~k~VVlaaGa~~t~~l--L~~Sgi 285 (512)
.+...+ ++.|++++++++|++|..+ ++.+ .|++.+ + |+..++.++ .||+|+|..-+..+ |..+|+
T Consensus 215 ~l~~~l-~~~gV~i~~~~~v~~i~~~-~~~~-~v~~~~-~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~g~ 283 (464)
T 2eq6_A 215 LLRRAL-EKEGIRVRTKTKAVGYEKK-KDGL-HVRLEP-AEGGEGEEVVVD-KVLVAVGRKPRTEGLGLEKAGV 283 (464)
T ss_dssp HHHHHH-HHTTCEEECSEEEEEEEEE-TTEE-EEEEEE-TTCCSCEEEEES-EEEECSCEEESCTTSSHHHHTC
T ss_pred HHHHHH-HhcCCEEEcCCEEEEEEEe-CCEE-EEEEee-cCCCceeEEEcC-EEEECCCcccCCCCCChhhcCc
Confidence 344445 5789999999999999876 5443 355553 3 665678998 69999997655554 455554
No 152
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.71 E-value=2.6e-05 Score=80.53 Aligned_cols=39 Identities=33% Similarity=0.510 Sum_probs=35.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
...++||||||+|++|+++|.+|++. |.+|+|||+++..
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDV 51 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSS
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCC
Confidence 34579999999999999999999998 9999999998753
No 153
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.71 E-value=2e-05 Score=75.15 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
|||+|||+|++|+++|..|+++ |. +|+|||+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~~v~lie~~~ 35 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-GVKNAVLFEKGM 35 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCSSEEEECSSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-CCCcEEEEcCCC
Confidence 8999999999999999999998 99 999999963
No 154
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.70 E-value=3.8e-05 Score=78.41 Aligned_cols=58 Identities=21% Similarity=0.202 Sum_probs=40.8
Q ss_pred hhhhhcccCCCCCEEEEcCcEEEEEEec-CCC-----eEEEEEEEec-CCeEEEEecCcEEEEcCCc
Q psy1059 214 DAYLTPIAGKRTNLYVLKRSKVTKVIIN-DQN-----VATGVEYVNS-KGETVRVTANKEVILTAGA 273 (512)
Q Consensus 214 ~~~l~~~~~~~~g~~v~~~~~V~~i~~~-~~~-----~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa 273 (512)
..||.... ++-+..|..+++|++|... .++ ...-|++.+. +|+..++.|+ .||+|+|.
T Consensus 148 ~~Yl~~~A-~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar-~vVlatG~ 212 (501)
T 4b63_A 148 EDYMRWCA-QQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTR-KVVIAIGG 212 (501)
T ss_dssp HHHHHHHH-HTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEE-EEEECCCC
T ss_pred HHHHHHHH-HHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeC-EEEECcCC
Confidence 36676555 5556678899999999875 111 2345666654 5777889997 79999994
No 155
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.70 E-value=1.2e-05 Score=82.47 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=39.5
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCch
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 274 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~ 274 (512)
..|...+ .+.|++++.+ +|++|..++++++++|++.+ |+ +++|+ .||.|+|+.
T Consensus 177 ~~L~~~a-~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~--g~--~~~ad-~vV~A~G~~ 229 (511)
T 2weu_A 177 RYLSEYA-IARGVRHVVD-DVQHVGQDERGWISGVHTKQ--HG--EISGD-LFVDCTGFR 229 (511)
T ss_dssp HHHHHHH-HHTTCEEEEC-CEEEEEECTTSCEEEEEESS--SC--EEECS-EEEECCGGG
T ss_pred HHHHHHH-HHCCCEEEEC-eEeEEEEcCCCCEEEEEECC--CC--EEEcC-EEEECCCcc
Confidence 3444444 4579999999 99999885356777887654 65 68998 799999974
No 156
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.69 E-value=2.1e-05 Score=79.79 Aligned_cols=59 Identities=15% Similarity=0.168 Sum_probs=41.2
Q ss_pred CCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHH--HHHcCC
Q psy1059 224 RTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGI 285 (512)
Q Consensus 224 ~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~l--L~~Sgi 285 (512)
+.|++++++++|++|..+ ++. ..|.+.+.+|+..++.++ .||+|+|..-++.+ |..+|+
T Consensus 228 ~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~gl 288 (468)
T 2qae_A 228 NEKMKFMTSTKVVGGTNN-GDS-VSLEVEGKNGKRETVTCE-ALLVSVGRRPFTGGLGLDKINV 288 (468)
T ss_dssp HTCCEEECSCEEEEEEEC-SSS-EEEEEECC---EEEEEES-EEEECSCEEECCTTSCHHHHTC
T ss_pred cCCcEEEeCCEEEEEEEc-CCe-EEEEEEcCCCceEEEECC-EEEECCCcccCCCCCCchhcCC
Confidence 579999999999999876 443 345554213644579998 69999998766666 556665
No 157
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.69 E-value=2.2e-05 Score=76.78 Aligned_cols=34 Identities=32% Similarity=0.571 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
++||+|||+|++|+++|.+|++. |. +|+|||+.+
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC
Confidence 58999999999999999999998 99 999999986
No 158
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.69 E-value=2.3e-05 Score=81.07 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHhC---CCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSE---VSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~---~~g~~VlvlE~g~ 44 (512)
..+||||||+|++|+++|..|++ . |.+|+|||+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQG-TADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTT-SSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCC-CCcEEEEeCCC
Confidence 46899999999999999999999 7 99999999965
No 159
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.69 E-value=2.5e-05 Score=79.92 Aligned_cols=39 Identities=28% Similarity=0.327 Sum_probs=35.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
...+||||||+|++|+++|+.|+++ |.+|+|||+.+..+
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~g 69 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPG 69 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSSB
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCC
Confidence 4468999999999999999999998 99999999987653
No 160
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.68 E-value=1.7e-05 Score=80.76 Aligned_cols=37 Identities=22% Similarity=0.388 Sum_probs=33.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
+.+|||||||+|++|+++|.+|++. |.+|+|||+.+.
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~~ 40 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCC
Confidence 3479999999999999999999998 999999999654
No 161
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.68 E-value=2.6e-05 Score=74.24 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=30.4
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEA 42 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~ 42 (512)
+|||+|||+|++|+++|..|++. |.+|+|||+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK-GIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT-TCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeC
Confidence 48999999999999999999998 999999986
No 162
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.67 E-value=1.5e-05 Score=81.10 Aligned_cols=36 Identities=25% Similarity=0.516 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.+|||||||+|++|+++|.+|++. |++|+|+|+.+.
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~ 39 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCC
Confidence 469999999999999999999998 999999999653
No 163
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.67 E-value=2e-05 Score=76.13 Aligned_cols=35 Identities=26% Similarity=0.365 Sum_probs=32.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
...+||+|||+|++|+++|..|++. |++|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC
Confidence 4579999999999999999999998 9999999975
No 164
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.67 E-value=1.4e-05 Score=76.96 Aligned_cols=56 Identities=16% Similarity=0.269 Sum_probs=40.3
Q ss_pred CCCCEEEEcCcEEEEEEecCCC--eEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQN--VATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~--~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
++.|+++++++.|.+|..+ ++ ++.+|++.+. +|+..++.++ .||+|+|.-.++.++
T Consensus 206 ~~~gv~i~~~~~v~~i~~~-~~~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYGD-GERDVLGGLKVKNVVTGDVSDLKVS-GLFFAIGHEPATKFL 264 (333)
T ss_dssp TCTTEEEECSEEEEEEEES-SSSSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred hCCCeeEecCCceEEEeCC-CCccceeeEEEEecCCCceEEEecC-EEEEEeCCccchHHh
Confidence 5678888888888888766 44 7777887753 4655678888 688888865544443
No 165
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.66 E-value=2.5e-05 Score=79.82 Aligned_cols=34 Identities=29% Similarity=0.559 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+|||||||+|++|+++|.+|++. |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC
Confidence 58999999999999999999998 99999999985
No 166
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.66 E-value=2.4e-05 Score=79.01 Aligned_cols=35 Identities=29% Similarity=0.555 Sum_probs=32.8
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
+|||||||+|++|+++|.+|++. |.+|+|+|+.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCCC
Confidence 48999999999999999999998 999999999864
No 167
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.64 E-value=2.7e-05 Score=76.65 Aligned_cols=34 Identities=26% Similarity=0.544 Sum_probs=31.5
Q ss_pred cEEEECCChhHHHHHHHHhCC-CCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~-~g~~VlvlE~g~~ 45 (512)
||||||+|++|+++|..|+++ +|.+|+|||+.+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 899999999999999999985 5999999999874
No 168
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.64 E-value=2.4e-05 Score=79.43 Aligned_cols=38 Identities=29% Similarity=0.469 Sum_probs=34.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
+.+|||||||+|++|+++|.+|++. |.+|+|+|+.+..
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~~~ 41 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 4579999999999999999999998 9999999998643
No 169
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.64 E-value=2.7e-05 Score=80.12 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=38.1
Q ss_pred hhhhcccCCC-CCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCch
Q psy1059 215 AYLTPIAGKR-TNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 274 (512)
Q Consensus 215 ~~l~~~~~~~-~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~ 274 (512)
.+|...+ .+ .|++++.+ +|++|..++++.+++|++.+ |+ +++|+ .||.|.|..
T Consensus 179 ~~L~~~a-~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~--g~--~i~ad-~vV~AdG~~ 232 (526)
T 2pyx_A 179 QLLTEHC-TQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ--NG--EISGQ-LFIDCTGAK 232 (526)
T ss_dssp HHHHHHH-HHTSCCEEEEC-CEEEEEECTTSCEEEEEESS--SC--EEECS-EEEECSGGG
T ss_pred HHHHHHH-HhcCCCEEEEe-EEEEEEecCCCcEEEEEECC--CC--EEEcC-EEEECCCcc
Confidence 4444444 45 79999999 59999886345666776644 55 49998 799999974
No 170
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.64 E-value=2.5e-05 Score=79.34 Aligned_cols=37 Identities=22% Similarity=0.345 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
..+|||||||+|++|+++|.+|++. |.+|+|||+.+.
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~~ 40 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNET 40 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCC
Confidence 3469999999999999999999998 999999999864
No 171
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.61 E-value=3.2e-05 Score=82.72 Aligned_cols=39 Identities=31% Similarity=0.400 Sum_probs=35.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
...+||||||+|++|+++|+.|+++ |++|+|||+.+..+
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~g 372 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRIG 372 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEeccccee
Confidence 3468999999999999999999998 99999999987653
No 172
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.61 E-value=4.3e-05 Score=79.09 Aligned_cols=41 Identities=20% Similarity=0.283 Sum_probs=37.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPI 48 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~~ 48 (512)
+..+|||||||+|..|+++|..|++. |++||+||+.+.++.
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYGG 45 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCG
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCcccC
Confidence 34589999999999999999999998 999999999998743
No 173
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.60 E-value=3.2e-05 Score=78.31 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=45.5
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHH--HHHcCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQL--LLLSGI 285 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~l--L~~Sgi 285 (512)
++...+ ++.|++++++++|++|..+ ++++ .|.+.+ +|+..++.++ .||+|+|.--++.+ |..+|+
T Consensus 217 ~l~~~l-~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~-~g~~~~~~~D-~vv~a~G~~p~~~~l~~~~~gl 283 (464)
T 2a8x_A 217 EIEKQF-KKLGVTILTATKVESIADG-GSQV-TVTVTK-DGVAQELKAE-KVLQAIGFAPNVEGYGLDKAGV 283 (464)
T ss_dssp HHHHHH-HHHTCEEECSCEEEEEEEC-SSCE-EEEEES-SSCEEEEEES-EEEECSCEEECCSSSCHHHHTC
T ss_pred HHHHHH-HHcCCEEEeCcEEEEEEEc-CCeE-EEEEEc-CCceEEEEcC-EEEECCCCCccCCCCCchhcCC
Confidence 344445 5779999999999999876 4443 345542 4655679998 79999997665555 555564
No 174
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.59 E-value=2.9e-05 Score=79.14 Aligned_cols=63 Identities=24% Similarity=0.318 Sum_probs=43.5
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHH-H-HHHcCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ-L-LLLSGI 285 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~-l-L~~Sgi 285 (512)
.+...+ ++.|++++++++|++|..+ ++....|++. +|+ ++.++ .||+|+|..-+.. | |..+|+
T Consensus 236 ~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~--~G~--~i~~D-~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 236 QLTEQL-RANGINVRTHENPAKVTKN-ADGTRHVVFE--SGA--EADYD-VVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp HHHHHH-HHTTEEEEETCCEEEEEEC-TTSCEEEEET--TSC--EEEES-EEEECSCEEESCTTSCGGGGTC
T ss_pred HHHHHH-HhCCCEEEeCCEEEEEEEc-CCCEEEEEEC--CCc--EEEcC-EEEEccCCCcCccccCchhcCc
Confidence 344445 5789999999999999876 4333445543 465 68998 6999999765544 3 445554
No 175
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.59 E-value=3e-05 Score=78.28 Aligned_cols=34 Identities=32% Similarity=0.475 Sum_probs=32.2
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
.+|||||||+|++|+++|.+|++. |.+|+|+|+.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~ 35 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG 35 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECC
Confidence 368999999999999999999998 9999999997
No 176
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.58 E-value=4.6e-05 Score=81.07 Aligned_cols=39 Identities=31% Similarity=0.395 Sum_probs=35.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
....+||||||+|++|+++|+.|+++ |++|+|+|+++..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~~ 426 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRDL 426 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSS
T ss_pred ccccceEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCC
Confidence 34578999999999999999999998 9999999998754
No 177
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.57 E-value=2.7e-05 Score=79.47 Aligned_cols=63 Identities=19% Similarity=0.323 Sum_probs=43.6
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHH-H-HHHcCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ-L-LLLSGI 285 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~-l-L~~Sgi 285 (512)
.+...+ ++.|++++++++|++|..+ ++....|++. +|+ ++.++ .||+|+|..-+.. | |..+|+
T Consensus 240 ~l~~~l-~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~--~G~--~i~~D-~vv~a~G~~p~~~~L~l~~~gl 304 (495)
T 2wpf_A 240 EVTKQL-TANGIEIMTNENPAKVSLN-TDGSKHVTFE--SGK--TLDVD-VVMMAIGRIPRTNDLQLGNVGV 304 (495)
T ss_dssp HHHHHH-HHTTCEEEESCCEEEEEEC-TTSCEEEEET--TSC--EEEES-EEEECSCEEECCGGGTGGGTTC
T ss_pred HHHHHH-HhCCCEEEeCCEEEEEEEc-CCceEEEEEC--CCc--EEEcC-EEEECCCCcccccccchhhcCc
Confidence 344445 5789999999999999876 4333455554 365 68998 7999999765554 3 344554
No 178
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.57 E-value=3.7e-05 Score=81.23 Aligned_cols=35 Identities=43% Similarity=0.581 Sum_probs=33.0
Q ss_pred CcccEEEECCChhHHHHHHHHhC-----CCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSE-----VSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~-----~~g~~VlvlE~g~ 44 (512)
.++||||||+|++|+++|..|++ . |.+|+||||.+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~ 46 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCC
Confidence 36999999999999999999999 8 99999999976
No 179
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.55 E-value=3.5e-05 Score=77.81 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=32.4
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+|||||||+|++|+++|.+|++. |.+|+|+|++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCEEEEEccCC
Confidence 469999999999999999999998 99999999943
No 180
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.54 E-value=4.8e-05 Score=77.15 Aligned_cols=37 Identities=35% Similarity=0.500 Sum_probs=33.1
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGDT 46 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~~ 46 (512)
..+||+|||+|++|+++|++|+++ |. +|+|+|+++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCC
Confidence 468999999999999999999998 98 89999998765
No 181
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.52 E-value=6.2e-05 Score=75.71 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=34.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
...+||+|||||++|+++|..|++. |++|+|+|+.+..
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDRM 157 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCCC
Confidence 3568999999999999999999998 9999999998754
No 182
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.48 E-value=4.7e-05 Score=77.79 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhCC-C-CCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEV-S-SLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~-~-g~~VlvlE~g~ 44 (512)
+|||||||+|++|+++|.+|++. + |.+|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999985 3 99999999986
No 183
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.47 E-value=6.4e-05 Score=78.70 Aligned_cols=35 Identities=14% Similarity=0.321 Sum_probs=32.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
...|||+|||+|++|+++|.+|++. |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC-CCeEEEEecc
Confidence 4579999999999999999999998 9999999984
No 184
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.45 E-value=9.1e-05 Score=72.89 Aligned_cols=63 Identities=10% Similarity=0.095 Sum_probs=45.9
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
..+...+ ++.|++++++++|++|..+ ++. ..|++. +|+ ++.++ .||+|+|...+..++..+|+
T Consensus 191 ~~l~~~l-~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~--~g~--~i~~d-~vv~a~G~~p~~~l~~~~g~ 253 (384)
T 2v3a_A 191 KAVQAGL-EGLGVRFHLGPVLASLKKA-GEG-LEAHLS--DGE--VIPCD-LVVSAVGLRPRTELAFAAGL 253 (384)
T ss_dssp HHHHHHH-HTTTCEEEESCCEEEEEEE-TTE-EEEEET--TSC--EEEES-EEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHH-HHcCCEEEeCCEEEEEEec-CCE-EEEEEC--CCC--EEECC-EEEECcCCCcCHHHHHHCCC
Confidence 3444455 5789999999999999876 443 234443 464 68998 69999998777677777775
No 185
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.43 E-value=8.3e-05 Score=76.30 Aligned_cols=35 Identities=26% Similarity=0.453 Sum_probs=32.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEA 42 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~ 42 (512)
....|||+|||+|++|+++|.+|+++ |.+|+|+|+
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~-G~~v~lie~ 243 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARK-GIRTGLMGE 243 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECS
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhC-CCeEEEEEC
Confidence 34579999999999999999999998 999999997
No 186
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.37 E-value=0.00017 Score=76.50 Aligned_cols=39 Identities=23% Similarity=0.290 Sum_probs=35.1
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
....+||||||+|++|+.+|..|++. |.+|+|+|+.+..
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~ 408 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEI 408 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCC
Confidence 34568999999999999999999998 9999999998754
No 187
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.36 E-value=0.00013 Score=77.04 Aligned_cols=39 Identities=26% Similarity=0.396 Sum_probs=35.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
...+||+|||+|++|+++|+.|+++ |.+|+|+|+.+..+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVG 143 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSB
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCCC
Confidence 4568999999999999999999998 99999999987653
No 188
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.35 E-value=0.0001 Score=75.16 Aligned_cols=63 Identities=16% Similarity=0.286 Sum_probs=47.2
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
.+...+ ++.|+++++++.|++|..+ ++++ .|++. +|+ ++.++ .||+|+|..-++.|+..+|+.
T Consensus 231 ~~~~~l-~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~--dG~--~i~aD-~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 231 WTMEKV-RREGVKVMPNAIVQSVGVS-SGKL-LIKLK--DGR--KVETD-HIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp HHHHHH-HTTTCEEECSCCEEEEEEE-TTEE-EEEET--TSC--EEEES-EEEECCCEEECCTTHHHHTCC
T ss_pred HHHHHH-HhcCCEEEeCCEEEEEEec-CCeE-EEEEC--CCC--EEECC-EEEECCCCCccHHHHHHcCCc
Confidence 344445 6789999999999999876 5544 45554 465 68998 799999988777788777763
No 189
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.34 E-value=0.00012 Score=74.70 Aligned_cols=35 Identities=17% Similarity=0.318 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHHhCCCC---CeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSS---LKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g---~~VlvlE~g~~ 45 (512)
++||||||+|++|+++|.+|++. | .+|+|||+.+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCC
Confidence 58999999999999999999997 7 99999999874
No 190
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.33 E-value=0.00015 Score=70.81 Aligned_cols=59 Identities=20% Similarity=0.257 Sum_probs=42.7
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
.++...+ ++.|++++++++|+++. . + +|++. +|+ +.++ .||+|+|..-++.||..+|+.
T Consensus 187 ~~l~~~l-~~~gV~i~~~~~v~~i~-~-~----~v~~~--~g~---i~~D-~vi~a~G~~p~~~ll~~~gl~ 245 (367)
T 1xhc_A 187 NMIKDML-EETGVKFFLNSELLEAN-E-E----GVLTN--SGF---IEGK-VKICAIGIVPNVDLARRSGIH 245 (367)
T ss_dssp HHHHHHH-HHTTEEEECSCCEEEEC-S-S----EEEET--TEE---EECS-CEEEECCEEECCHHHHHTTCC
T ss_pred HHHHHHH-HHCCCEEEcCCEEEEEE-e-e----EEEEC--CCE---EEcC-EEEECcCCCcCHHHHHhCCCC
Confidence 3444555 67899999999999986 2 2 35553 353 8998 699999987776777777753
No 191
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.33 E-value=0.00016 Score=77.31 Aligned_cols=39 Identities=26% Similarity=0.324 Sum_probs=35.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 7 SGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 7 ~~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
....+||+|||+|++|+.+|..|+++ |++|+|+|+.+..
T Consensus 386 ~~~~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~ 424 (729)
T 1o94_A 386 TKNKDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKI 424 (729)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 34568999999999999999999998 9999999998754
No 192
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.31 E-value=0.0002 Score=77.15 Aligned_cols=39 Identities=26% Similarity=0.396 Sum_probs=35.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCCC
Q psy1059 8 GDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTP 47 (512)
Q Consensus 8 ~~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~~ 47 (512)
...+||+|||+|++|+++|++|+++ |++|+|+|+.+..+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcCC
Confidence 4468999999999999999999998 99999999987653
No 193
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.30 E-value=0.00012 Score=73.87 Aligned_cols=58 Identities=19% Similarity=0.179 Sum_probs=43.2
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHH
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLL 281 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~ 281 (512)
.+...+ ++.|++++++++|++|..+ ++++.+|.. +|+ ++.++ .||+|+|.--++.+|.
T Consensus 196 ~l~~~l-~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~---~g~--~i~~D-~vv~a~G~~p~~~ll~ 253 (452)
T 2cdu_A 196 ILAKDY-EAHGVNLVLGSKVAAFEEV-DDEIITKTL---DGK--EIKSD-IAILCIGFRPNTELLK 253 (452)
T ss_dssp HHHHHH-HHTTCEEEESSCEEEEEEE-TTEEEEEET---TSC--EEEES-EEEECCCEEECCGGGT
T ss_pred HHHHHH-HHCCCEEEcCCeeEEEEcC-CCeEEEEEe---CCC--EEECC-EEEECcCCCCCHHHHH
Confidence 444445 6789999999999999875 666666654 364 68898 7999999776665543
No 194
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.26 E-value=0.00014 Score=73.23 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=32.9
Q ss_pred ccEEEECCChhHHHHHHHHhCC-CCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~-~g~~VlvlE~g~~~ 46 (512)
.||||||+|++|+++|.+|++. +|.+|+|||+++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999985 58999999999864
No 195
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.24 E-value=0.00017 Score=72.57 Aligned_cols=62 Identities=19% Similarity=0.157 Sum_probs=44.3
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
..+...+ ++. +++++++.|.++..+ + ++..+. . +|+ ++.++ .||+|+|..-++.++...|+.
T Consensus 194 ~~l~~~l-~~~-v~i~~~~~v~~i~~~-~-~v~~v~-~--~g~--~i~~D-~Vv~a~G~~p~~~l~~~~gl~ 255 (449)
T 3kd9_A 194 DILEEKL-KKH-VNLRLQEITMKIEGE-E-RVEKVV-T--DAG--EYKAE-LVILATGIKPNIELAKQLGVR 255 (449)
T ss_dssp HHHHHHH-TTT-SEEEESCCEEEEECS-S-SCCEEE-E--TTE--EEECS-EEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHH-HhC-cEEEeCCeEEEEecc-C-cEEEEE-e--CCC--EEECC-EEEEeeCCccCHHHHHhCCcc
Confidence 3444555 566 999999999999765 4 444442 2 354 68998 799999987777788777753
No 196
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.23 E-value=0.0002 Score=71.58 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhC--CCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSE--VSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~--~~g~~VlvlE~g~~~ 46 (512)
.||||||+|++|+++|.+|++ . |.+|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~-g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCC-CCeEEEECCCCCC
Confidence 589999999999999999998 6 9999999998753
No 197
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.23 E-value=0.00016 Score=71.84 Aligned_cols=59 Identities=20% Similarity=0.299 Sum_probs=44.8
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
.+...+ ++.|++++++++|++|. + + +|++. +|+ ++.++ .||+|+|..-++.++..+|+.
T Consensus 192 ~l~~~l-~~~GV~i~~~~~v~~i~-~-~----~v~~~--~g~--~i~~D-~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 192 FVARYH-AAQGVDLRFERSVTGSV-D-G----VVLLD--DGT--RIAAD-MVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp HHHHHH-HHTTCEEEESCCEEEEE-T-T----EEEET--TSC--EEECS-EEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHH-HHcCcEEEeCCEEEEEE-C-C----EEEEC--CCC--EEEcC-EEEECcCCCccHHHHHhCCCC
Confidence 344445 57899999999999998 5 4 45554 365 68998 799999987777788887763
No 198
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.19 E-value=0.00018 Score=73.32 Aligned_cols=57 Identities=14% Similarity=0.142 Sum_probs=44.2
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
++.|+++++++.|++|..+ +++.+|+.. +|+ ++.++ .||+|+|..-+..|+..+|+.
T Consensus 268 ~~~GV~v~~~~~v~~i~~~--~~v~~v~~~--~g~--~i~aD-~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 268 ERWGIDYVHIPNVKRVEGN--EKVERVIDM--NNH--EYKVD-ALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHHTCEEEECSSEEEEECS--SSCCEEEET--TCC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HhCCcEEEeCCeeEEEecC--CceEEEEeC--CCe--EEEeC-EEEECCCcCcCchHHHhcCCC
Confidence 4679999999999999754 345566543 364 68998 799999988777888888763
No 199
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.19 E-value=0.00021 Score=71.61 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=32.5
Q ss_pred cccEEEECCChhHHHHHHHHhC---CCCCeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSE---VSSLKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~---~~g~~VlvlE~g~~ 45 (512)
..||||||+|++|+++|..|++ . |.+|+|||+.+.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~-g~~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGS-GHEVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGG-GSEEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCC-cCEEEEEeCCCC
Confidence 4689999999999999999998 6 999999999885
No 200
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.18 E-value=0.00018 Score=71.44 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=31.7
Q ss_pred cEEEECCChhHHHHHHHHhC---CCCCeEEEEcCcCCC
Q psy1059 12 DIIIVGASAAGCVLANRLSE---VSSLKVLLIEAGGDT 46 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~---~~g~~VlvlE~g~~~ 46 (512)
||||||+|++|+++|.+|++ . |.+|+|||+.+..
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~-g~~V~vie~~~~~ 39 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGS-KADVKVINKSRFS 39 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGG-GSEEEEEESSSEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCC-CCeEEEEeCCCCc
Confidence 79999999999999999998 7 9999999998853
No 201
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.18 E-value=0.00021 Score=78.79 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=46.8
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEe--c---CCeEEEEecCcEEEEcCCchhcHHHHHHcC
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVN--S---KGETVRVTANKEVILTAGAIANAQLLLLSG 284 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~--~---~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sg 284 (512)
++.|+++++++.|.+|.-++++++.+|++.+ . +|+..++.++ .||+|+|..-+..++...+
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D-~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEAD-VLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECS-EEEEECCEEECCHHHHHTT
T ss_pred HhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcC-EEEECCCcCcChHHHHhCC
Confidence 4679999999999999863146788888875 2 2545689999 7999999876777776654
No 202
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.17 E-value=0.0021 Score=63.10 Aligned_cols=33 Identities=24% Similarity=0.442 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-+++|||+|..|+.+|..|++. |.+|+|+|+++
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 178 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCE 178 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCc
Confidence 4699999999999999999998 99999999976
No 203
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.15 E-value=0.00024 Score=74.19 Aligned_cols=61 Identities=18% Similarity=0.248 Sum_probs=45.8
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
.+...+ ++.|+++++++.|++|..+ ++ +|.+.+ |+ ++.++ .||+|+|..-++.+|..+|+.
T Consensus 233 ~l~~~l-~~~GV~i~~~~~v~~i~~~-~~---~v~~~~--g~--~i~~D-~Vi~a~G~~p~~~~l~~~g~~ 293 (588)
T 3ics_A 233 YVHEHM-KNHDVELVFEDGVDALEEN-GA---VVRLKS--GS--VIQTD-MLILAIGVQPESSLAKGAGLA 293 (588)
T ss_dssp HHHHHH-HHTTCEEECSCCEEEEEGG-GT---EEEETT--SC--EEECS-EEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHH-HHcCCEEEECCeEEEEecC-CC---EEEECC--CC--EEEcC-EEEEccCCCCChHHHHhcCce
Confidence 344445 6789999999999999765 33 355543 65 68898 799999988777788777763
No 204
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.10 E-value=0.0044 Score=58.52 Aligned_cols=55 Identities=18% Similarity=0.353 Sum_probs=44.4
Q ss_pred CCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 224 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 224 ~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
..|++++++++|++|..+ ++++.+|++.+. +|+..++.++ .||+|+|...++.+|
T Consensus 192 ~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l 247 (310)
T 1fl2_A 192 LKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHNIELA-GIFVQIGLLPNTNWL 247 (310)
T ss_dssp CTTEEEESSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred CCCeEEecCCceEEEEcC-CCcEEEEEEEECCCCcEEEEEcC-EEEEeeCCccCchHH
Confidence 368999999999999877 778889999873 5766789998 799999976555554
No 205
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.09 E-value=0.0024 Score=61.94 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|+|||+|..|+-+|..|++. |.+|.++++++
T Consensus 165 ~vvVvG~G~~g~e~A~~l~~~-g~~V~lv~~~~ 196 (360)
T 3ab1_A 165 RVVIVGGGDSALDWTVGLIKN-AASVTLVHRGH 196 (360)
T ss_dssp EEEEECSSHHHHHHHHHTTTT-SSEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCC
Confidence 699999999999999999998 99999999976
No 206
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.09 E-value=0.00025 Score=71.28 Aligned_cols=36 Identities=19% Similarity=0.358 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhCC-CCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~-~g~~VlvlE~g~~~ 46 (512)
.||||||+|++|+++|.+|++. +|.+|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 3899999999999999999975 58999999998753
No 207
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.09 E-value=0.002 Score=61.31 Aligned_cols=60 Identities=25% Similarity=0.445 Sum_probs=46.4
Q ss_pred CCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 224 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 224 ~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
+.|++++++++|++|..+ ++++.+|.+.+. +|+..++.++ .||+|+|...++.+|..+|+
T Consensus 202 ~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGD-GKKVTGVKYKDRTTGEEKLIETD-GVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HTTCCEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEECCS-EEEECCCEEECCGGGTTSCC
T ss_pred cCCcEEEcCCeEEEEecC-CceEEEEEEEEcCCCceEEEecC-EEEEeeCCccChHHHhhccc
Confidence 357888899999999877 677889988742 5766789998 79999997766666655554
No 208
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.04 E-value=0.00039 Score=70.54 Aligned_cols=61 Identities=21% Similarity=0.270 Sum_probs=43.7
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
.+...+ ++.|+++++++.|++|..+ +++..|.. ++. ++.++ .||+|+|...++.+|..+|+
T Consensus 232 ~l~~~l-~~~Gv~i~~~~~v~~i~~~--~~v~~v~~---~~~--~i~~D-~vi~a~G~~p~~~~l~~~g~ 292 (480)
T 3cgb_A 232 YIYKEA-DKHHIEILTNENVKAFKGN--ERVEAVET---DKG--TYKAD-LVLVSVGVKPNTDFLEGTNI 292 (480)
T ss_dssp HHHHHH-HHTTCEEECSCCEEEEEES--SBEEEEEE---TTE--EEECS-EEEECSCEEESCGGGTTSCC
T ss_pred HHHHHH-HHcCcEEEcCCEEEEEEcC--CcEEEEEE---CCC--EEEcC-EEEECcCCCcChHHHHhCCc
Confidence 344445 5789999999999999765 45555543 243 68998 79999998766666666654
No 209
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.02 E-value=0.00037 Score=70.13 Aligned_cols=37 Identities=24% Similarity=0.196 Sum_probs=33.2
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCC--CeEEEEcCcCCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSS--LKVLLIEAGGDT 46 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g--~~VlvlE~g~~~ 46 (512)
..+||+|||+|++|+.+|..|++. | .+|+|+|+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCcC
Confidence 458999999999999999999997 7 999999998754
No 210
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.01 E-value=0.0025 Score=64.31 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. |.+|+|+|+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 202 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMP 202 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCC
Confidence 3699999999999999999998 99999999986
No 211
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.95 E-value=0.0005 Score=76.31 Aligned_cols=61 Identities=23% Similarity=0.288 Sum_probs=45.7
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-----------CCeEEEEecCcEEEEcCCch-hcHHHHHH-cCC
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-----------KGETVRVTANKEVILTAGAI-ANAQLLLL-SGI 285 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-----------~g~~~~v~A~k~VVlaaGa~-~t~~lL~~-Sgi 285 (512)
++.|+++++++.+.+|..+ ++++++|++.+. +|+..++.+| .||+|.|.. .++.|+.. +|+
T Consensus 381 ~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD-~Vi~A~G~~~~~~~l~~~~~gl 454 (1025)
T 1gte_A 381 KEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKAD-VVISAFGSVLRDPKVKEALSPI 454 (1025)
T ss_dssp HHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECS-EEEECSCEECCCHHHHHHTTTS
T ss_pred HHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCcccCCCceEEEECC-EEEECCCCCCCchhhhhcccCc
Confidence 4679999999999999877 788988887521 2344679998 799999974 35666654 455
No 212
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.94 E-value=0.0029 Score=63.75 Aligned_cols=51 Identities=16% Similarity=0.087 Sum_probs=39.7
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhc
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIAN 276 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t 276 (512)
...+++|++++.|+++..+ ++. ..|.+.+. +|+..++.+| .||+|+|.-.+
T Consensus 327 ~~~~v~i~~~~~v~~v~~~-~~~-~~v~~~~~~~g~~~~~~~D-~Vv~AtG~~p~ 378 (463)
T 3s5w_A 327 GIPRHAFRCMTTVERATAT-AQG-IELALRDAGSGELSVETYD-AVILATGYERQ 378 (463)
T ss_dssp CCCCSEEETTEEEEEEEEE-TTE-EEEEEEETTTCCEEEEEES-EEEECCCEECC
T ss_pred CCCCeEEEeCCEEEEEEec-CCE-EEEEEEEcCCCCeEEEECC-EEEEeeCCCCC
Confidence 4579999999999999876 544 44666644 5777789999 79999996544
No 213
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.86 E-value=0.0061 Score=57.56 Aligned_cols=58 Identities=12% Similarity=0.113 Sum_probs=44.7
Q ss_pred CCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHHHHc
Q psy1059 224 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLS 283 (512)
Q Consensus 224 ~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL~~S 283 (512)
+.|+++++++.|.+|..+ ++++.+|++.+. +|+..++.++ .||+|+|...++.+|..+
T Consensus 191 ~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVP-GFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp CTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECS-EEEECSCEEECCGGGBCT
T ss_pred CCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecC-EEEEEecCccChhhhhcc
Confidence 468999999999999876 677888888742 4766789998 799999976555555433
No 214
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.86 E-value=0.00041 Score=72.79 Aligned_cols=36 Identities=28% Similarity=0.408 Sum_probs=33.0
Q ss_pred cccEEEECCChhHHHHHHHHhCCCC--------CeEEEEcCcC-CC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSS--------LKVLLIEAGG-DT 46 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g--------~~VlvlE~g~-~~ 46 (512)
..+|+|||+|++|+++|++|+++ | .+|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 57999999999999999999987 8 9999999987 54
No 215
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.84 E-value=0.00048 Score=69.26 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=32.9
Q ss_pred cccEEEECCChhHHHHHHHHhC-C-C----CCeEEEEcCcCCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSE-V-S----SLKVLLIEAGGDT 46 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~-~-~----g~~VlvlE~g~~~ 46 (512)
.+||+|||+|++|+.+|..|++ . + |.+|+|+|+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 4799999999999999999998 5 3 8999999998753
No 216
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.82 E-value=0.01 Score=56.56 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|+|||+|..|+-+|..|++. |.+|.++++.+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~-g~~V~lv~~~~ 192 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRD 192 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-SSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHhc-CCeEEEEecCC
Confidence 3699999999999999999998 99999999976
No 217
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.82 E-value=0.0041 Score=61.48 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 178 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA-GVHVSLVETQP 178 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCC
Confidence 4699999999999999999998 99999999986
No 218
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.81 E-value=0.00065 Score=70.51 Aligned_cols=36 Identities=25% Similarity=0.464 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhCC-CCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~-~g~~VlvlE~g~~~ 46 (512)
.||+|||+|++|+++|.+|++. ++.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 3799999999999999999986 57899999999864
No 219
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.77 E-value=0.0065 Score=61.46 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. |.+|+|+|+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 216 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQP 216 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCC
Confidence 3699999999999999999998 99999999986
No 220
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.72 E-value=0.00087 Score=66.20 Aligned_cols=62 Identities=11% Similarity=0.004 Sum_probs=43.4
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
.+...+ ++.++++++++.|..+..+ +.. ..|++. +|+ ++.++ .||++.|.- .+.++..||+.
T Consensus 207 ~~~~~l-~~~gi~v~~~~~v~~v~~~-~~~-~~v~~~--~g~--~i~~D-~vi~~~g~~-~~~~~~~~gl~ 268 (401)
T 3vrd_B 207 LYGFGT-ENALIEWHPGPDAAVVKTD-TEA-MTVETS--FGE--TFKAA-VINLIPPQR-AGKIAQSASLT 268 (401)
T ss_dssp HSCTTS-TTCSEEEECTTTTCEEEEE-TTT-TEEEET--TSC--EEECS-EEEECCCEE-ECHHHHHTTCC
T ss_pred HHHHHH-HhcCcEEEeCceEEEEEec-ccc-eEEEcC--CCc--EEEee-EEEEecCcC-CchhHhhcccc
Confidence 344455 6889999999999988876 322 123333 466 68998 699998853 45788888874
No 221
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.66 E-value=0.0096 Score=60.88 Aligned_cols=54 Identities=20% Similarity=0.379 Sum_probs=44.5
Q ss_pred CCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 225 TNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 225 ~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
.|+++++++.|++|.-+ ++++++|.+.+. +|+..++.++ .||+|.|...++.+|
T Consensus 404 ~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHSVALA-GIFVQIGLLPNTHWL 458 (521)
T ss_dssp TTEEEECSEEEEEEEEC-SSSEEEEEEEETTTCCEEEEECS-EEEECCCEEESCGGG
T ss_pred CCcEEEeCCEEEEEEcC-CCcEEEEEEEeCCCCceEEEEcC-EEEECcCCCCCchHH
Confidence 68999999999999877 788999999873 5777789998 799999976554444
No 222
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.66 E-value=0.016 Score=55.05 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. |.+|.++++.+
T Consensus 154 ~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 185 (325)
T 2q7v_A 154 KVVVIGGGDAAVEEGMFLTKF-ADEVTVIHRRD 185 (325)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEeCCC
Confidence 699999999999999999998 99999999976
No 223
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.0022 Score=64.99 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. |.+|.++|+.+
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 218 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHGL-GSETHLVIRGE 218 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCceEEEEeCC
Confidence 699999999999999999998 99999999986
No 224
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.62 E-value=0.012 Score=59.50 Aligned_cols=33 Identities=21% Similarity=0.346 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 211 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRL-GADVTAVEFLG 211 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEeccC
Confidence 3699999999999999999998 99999999986
No 225
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.62 E-value=0.012 Score=59.56 Aligned_cols=33 Identities=21% Similarity=0.358 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 207 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRL-GVIVKVFGRSG 207 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHT-TCEEEEECCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECC
Confidence 3699999999999999999998 99999999987
No 226
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.58 E-value=0.0016 Score=66.32 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=32.4
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
++..|||||+|.+|+.+|.+|+++ +.+|+|||+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCC
Confidence 345799999999999999999987 999999999864
No 227
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.55 E-value=0.019 Score=54.71 Aligned_cols=59 Identities=19% Similarity=0.178 Sum_probs=43.6
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHHHHcC
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSG 284 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sg 284 (512)
++.|+++++++.|.+|..+ +++.+|++.+. +|+..++.++ .||+|+|.-.++.+|..++
T Consensus 202 ~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~ 261 (335)
T 2zbw_A 202 EEGRLEVLTPYELRRVEGD--ERVRWAVVFHNQTQEELALEVD-AVLILAGYITKLGPLANWG 261 (335)
T ss_dssp HTTSSEEETTEEEEEEEES--SSEEEEEEEETTTCCEEEEECS-EEEECCCEEEECGGGGGSC
T ss_pred ccCCeEEecCCcceeEccC--CCeeEEEEEECCCCceEEEecC-EEEEeecCCCCchHhhhcc
Confidence 4568999999999999764 56778888743 4766689998 7999999765544554444
No 228
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.55 E-value=0.0023 Score=62.75 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=32.8
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
+..-|+|||+|++|+.+|..|.+. +.+|+|+|+.+..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGK-CDDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCCC
Confidence 456799999999999999999665 9999999998864
No 229
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.53 E-value=0.022 Score=57.30 Aligned_cols=33 Identities=15% Similarity=0.326 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 207 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARL-GAEVTVVEFAP 207 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHh-CCEEEEEecCC
Confidence 3699999999999999999998 99999999986
No 230
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.51 E-value=0.0066 Score=60.93 Aligned_cols=32 Identities=31% Similarity=0.420 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 182 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHE 182 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEEESSS
T ss_pred eEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCC
Confidence 599999999999999999998 99999999986
No 231
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.50 E-value=0.012 Score=59.18 Aligned_cols=33 Identities=30% Similarity=0.336 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. |.+|+|+|+++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 204 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNY-GVDVTIVEFLP 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 3699999999999999999998 99999999986
No 232
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.48 E-value=0.0013 Score=65.86 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=41.7
Q ss_pred hhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCCC
Q psy1059 216 YLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIG 286 (512)
Q Consensus 216 ~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgig 286 (512)
.+...+ ++.|+++++++.|+++.- . .|.+. +|+ ++.++ .||+|.|..-+..+|..+|+.
T Consensus 193 ~~~~~l-~~~gV~i~~~~~v~~~~~---~---~v~~~--~g~--~~~~D-~vl~a~G~~Pn~~~~~~~gl~ 251 (437)
T 4eqs_A 193 PILDEL-DKREIPYRLNEEINAING---N---EITFK--SGK--VEHYD-MIIEGVGTHPNSKFIESSNIK 251 (437)
T ss_dssp HHHHHH-HHTTCCEEESCCEEEEET---T---EEEET--TSC--EEECS-EEEECCCEEESCGGGTTSSCC
T ss_pred HHHHHh-hccceEEEeccEEEEecC---C---eeeec--CCe--EEeee-eEEEEeceecCcHHHHhhhhh
Confidence 344445 678999999999998753 2 24443 366 68898 699999976666677667653
No 233
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.42 E-value=0.015 Score=59.64 Aligned_cols=34 Identities=12% Similarity=0.242 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.|+|||+|..|+-+|..|++. +.+|.|+++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAET-AKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCC
Confidence 3699999999999999999998 999999999985
No 234
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=96.41 E-value=0.011 Score=59.95 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 231 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARL-GAKVTVVEFLD 231 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCEEEEEeccc
Confidence 589999999999999999998 99999999986
No 235
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.37 E-value=0.019 Score=58.89 Aligned_cols=34 Identities=9% Similarity=0.131 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.|+|||+|..|+-+|..|++. +.+|.|+++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 3699999999999999999998 999999999985
No 236
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.25 E-value=0.013 Score=59.35 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=28.6
Q ss_pred cEEEECCChhHHHHHHHHhCC---CCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEV---SSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~---~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. .|.+|+++++.+
T Consensus 182 ~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 182 SITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 599999999999999999862 278999999865
No 237
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.21 E-value=0.026 Score=56.45 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~ 180 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLE 180 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEEccC
Confidence 599999999999999999998 99999999976
No 238
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.08 E-value=0.014 Score=60.64 Aligned_cols=32 Identities=22% Similarity=0.430 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 189 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 220 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRER-GIEVTLVEMAN 220 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEecCC
Confidence 699999999999999999998 99999999976
No 239
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.97 E-value=0.019 Score=58.41 Aligned_cols=33 Identities=18% Similarity=0.431 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 215 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTEL-GVPVTVVASQD 215 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 3689999999999999999998 99999999976
No 240
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.97 E-value=0.028 Score=53.36 Aligned_cols=59 Identities=10% Similarity=0.113 Sum_probs=44.3
Q ss_pred CCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 224 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 224 ~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
+.|++++++++|.+|..+ ++ +.+|.+.+. +|+..++.++ .||+|+|...++.+|..+|+
T Consensus 201 ~~gv~~~~~~~v~~i~~~-~~-~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 201 ASKVNVLTPFVPAELIGE-DK-IEQLVLEEVKGDRKEILEID-DLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp HSSCEEETTEEEEEEECS-SS-CCEEEEEETTSCCEEEEECS-EEEECCCEECCCGGGGGSSC
T ss_pred cCCeEEEeCceeeEEecC-Cc-eEEEEEEecCCCceEEEECC-EEEEeeccCCCchHHhhcCc
Confidence 568889999999999876 44 677888773 5566789998 79999997655556555543
No 241
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.96 E-value=0.037 Score=55.80 Aligned_cols=52 Identities=19% Similarity=0.351 Sum_probs=37.8
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHH
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 278 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~ 278 (512)
++.|++++++++|.++..+ ++++. |.+.+.+| ..++.++ .||+|+|.--+..
T Consensus 232 ~~~Gv~v~~~~~v~~i~~~-~~~~~-v~~~~~~g-~~~~~~D-~vi~a~G~~p~~~ 283 (476)
T 3lad_A 232 TKQGLKILLGARVTGTEVK-NKQVT-VKFVDAEG-EKSQAFD-KLIVAVGRRPVTT 283 (476)
T ss_dssp HHTTEEEEETCEEEEEEEC-SSCEE-EEEESSSE-EEEEEES-EEEECSCEEECCT
T ss_pred HhCCCEEEECCEEEEEEEc-CCEEE-EEEEeCCC-cEEEECC-EEEEeeCCcccCC
Confidence 4678999999999999877 55443 56665233 4578998 7999999754443
No 242
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.94 E-value=0.037 Score=57.16 Aligned_cols=32 Identities=22% Similarity=0.385 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. |.+|.++|+.+
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 184 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHL-GIKTTLLELAD 184 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCC
Confidence 699999999999999999998 99999999976
No 243
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.86 E-value=0.013 Score=59.00 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+++
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vt~v~~~~ 203 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGL-GVKTTLIYRGK 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCC
Confidence 3699999999999999999998 99999999976
No 244
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=95.81 E-value=0.034 Score=56.31 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. |.+|.++|+..
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~ 218 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGI-GLDTTVMMRSI 218 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHHc-CCceEEEEcCc
Confidence 599999999999999999998 99999999853
No 245
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.78 E-value=0.032 Score=56.36 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
.++|||+|..|+-+|..|++. |.+|.++++.
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~ 219 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKGL-GYEPTVMVRS 219 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred cEEEECCCHHHHHHHHHHHHc-CCEEEEEeCC
Confidence 599999999999999999998 9999999984
No 246
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.46 E-value=0.02 Score=58.00 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhCC--CCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEV--SSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~--~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. +|.+|.++|+.+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 223 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD 223 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC
Confidence 3699999999999999999874 289999999986
No 247
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.40 E-value=0.022 Score=57.76 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhCC--CCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEV--SSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~--~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. +|.+|+|+|+++
T Consensus 193 ~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 227 (495)
T 2wpf_A 193 RVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN 227 (495)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC
Confidence 699999999999999999874 289999999976
No 248
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.30 E-value=0.061 Score=59.64 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
.|+|||+|..|+-+|..|++. |. +|+|+++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEecC
Confidence 799999999999999999998 86 899999975
No 249
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.65 E-value=0.033 Score=52.51 Aligned_cols=33 Identities=12% Similarity=0.287 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEecccc
Confidence 599999999999999999998 999999999874
No 250
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.62 E-value=0.023 Score=56.80 Aligned_cols=35 Identities=17% Similarity=0.342 Sum_probs=32.4
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
...+++|||+|.+|+.+|..|++. |.+|+|+|+++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~ 182 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILD 182 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCc
Confidence 346899999999999999999998 99999999987
No 251
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.42 E-value=0.037 Score=46.19 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.-.|+|||+|..|..+|..|.+. |.+|+++++.+
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 34699999999999999999998 99999999865
No 252
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.38 E-value=0.039 Score=45.18 Aligned_cols=33 Identities=21% Similarity=0.435 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|+|||.|..|..+|..|.+. |.+|+++|+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 3599999999999999999998 99999999976
No 253
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.29 E-value=0.028 Score=54.98 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=31.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
.|+|||+|..|+-+|..|++. |.+|+|+|+.+..
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDS-GTPASIGIILEYP 181 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCcc
Confidence 699999999999999999998 9999999999854
No 254
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.05 E-value=0.04 Score=45.08 Aligned_cols=32 Identities=31% Similarity=0.532 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|+|+|..|..+|..|.++ |.+|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 599999999999999999998 99999999865
No 255
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.01 E-value=0.044 Score=44.51 Aligned_cols=32 Identities=38% Similarity=0.511 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|..+|..|++. |.+|+++|+.+
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999998 99999999854
No 256
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=93.88 E-value=0.058 Score=50.74 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. |.+|+|+|+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeecccc
Confidence 3699999999999999999998 99999999876
No 257
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=93.77 E-value=0.21 Score=52.86 Aligned_cols=32 Identities=19% Similarity=0.364 Sum_probs=29.8
Q ss_pred cEEEEC--CChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVG--ASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVG--sG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|+||| +|..|+-+|..|++. |.+|.++++.+
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~~ 558 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPGA 558 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEEcCCCCccHHHHHHHHHhC-CCeeEEEeccc
Confidence 499999 999999999999998 99999999876
No 258
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.71 E-value=0.048 Score=52.88 Aligned_cols=35 Identities=34% Similarity=0.413 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++. |.+|+++|+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT-TCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCee
Confidence 3699999999999999999998 9999999998753
No 259
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.67 E-value=0.043 Score=55.01 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.++|||+|..|+-+|..|++. |.+|+|+|+++.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 205 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL-GAQVSVVEARER 205 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCCc
Confidence 3699999999999999999998 999999999874
No 260
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=93.56 E-value=0.057 Score=54.03 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.++|||+|.+|+.+|..|++. |.+|+|+|+++.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~~ 201 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMDR 201 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecCCc
Confidence 3699999999999999999998 999999999873
No 261
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.55 E-value=0.054 Score=54.24 Aligned_cols=34 Identities=21% Similarity=0.470 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.++|||+|..|+-+|..|++. |.+|+|+|+++.
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANF-GTKVTILEGAGE 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCc
Confidence 4799999999999999999998 999999999863
No 262
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.26 E-value=0.064 Score=44.57 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
.++|+|+|..|..+|..|.+. |.+|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 499999999999999999998 9999999996
No 263
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.02 E-value=0.065 Score=41.97 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCC-CeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g-~~VlvlE~g~ 44 (512)
-.++|+|+|..|..+|..|.++ | .+|.++++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS-SNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCH
Confidence 3599999999999999999998 8 8999999865
No 264
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=92.91 E-value=0.078 Score=52.97 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=30.6
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-+|..|++. |.+|.|+|+++
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~ 200 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGL-GAKTHLFEMFD 200 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCC
Confidence 699999999999999999998 99999999986
No 265
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=92.44 E-value=0.073 Score=53.66 Aligned_cols=36 Identities=31% Similarity=0.444 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
.-+++|||+|..|+-+|..|++. |.+|+|+|+++..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 221 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL-GKKVRMIERNDHI 221 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT-TCEEEEECCGGGT
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCch
Confidence 35799999999999999999998 9999999998753
No 266
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=92.21 E-value=0.12 Score=51.92 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.++|||+|..|+-+|..|++. |.+|.|+|+.+.
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSF-GSEVTVVALEDR 200 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCc
Confidence 699999999999999999998 999999999863
No 267
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=92.17 E-value=0.11 Score=52.52 Aligned_cols=34 Identities=26% Similarity=0.356 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.++|||+|..|+-+|..|++. |.+|+|+|+.+.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 228 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVDT 228 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHC-CCeEEEEEcccc
Confidence 3699999999999999999998 999999999874
No 268
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.12 E-value=0.093 Score=42.72 Aligned_cols=32 Identities=16% Similarity=0.358 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|+|+|..|..+|..|.+. |.+|.++++.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 499999999999999999998 99999999864
No 269
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.05 E-value=0.12 Score=48.91 Aligned_cols=32 Identities=19% Similarity=0.392 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||+|..|+..|..|+++ |.+|.++.|.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 489999999999999999998 99999999965
No 270
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=91.84 E-value=0.12 Score=49.76 Aligned_cols=33 Identities=15% Similarity=0.303 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.|+|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKN-GSDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhc-CCeEEEEecCCC
Confidence 699999999999999999998 999999999863
No 271
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.82 E-value=0.12 Score=48.52 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||+|..|...|..+|.+ |++|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 499999999999999999998 99999999865
No 272
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=91.80 E-value=0.14 Score=50.73 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAARV 184 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCcc
Confidence 3699999999999999999998 9999999998753
No 273
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.72 E-value=0.16 Score=51.40 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.++|||+|..|+-+|..|++. |.+|.|+|+++.
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ 210 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRL-GIDSYIFARGNR 210 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSSS
T ss_pred eEEEECChHHHHHHHHHHHHc-CCeEEEEecCCc
Confidence 699999999999999999998 999999999874
No 274
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.66 E-value=0.13 Score=48.55 Aligned_cols=32 Identities=28% Similarity=0.279 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||+|..|+..|..|+++ |.+|.++.|..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 489999999999999999998 99999999964
No 275
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=91.58 E-value=0.15 Score=50.10 Aligned_cols=35 Identities=31% Similarity=0.616 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKL-GLSVTILEAGDEL 178 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCcc
Confidence 4699999999999999999998 9999999998753
No 276
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=91.55 E-value=0.12 Score=52.13 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~ 219 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMDG 219 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCc
Confidence 3699999999999999999998 999999999874
No 277
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=91.55 E-value=0.16 Score=50.60 Aligned_cols=34 Identities=21% Similarity=0.366 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCe-EEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLK-VLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~-VlvlE~g~~ 45 (512)
-.|+|||+|..|+-+|..|++. |.+ |+++++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCCC
Confidence 3699999999999999999998 998 999999863
No 278
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=91.35 E-value=0.13 Score=51.15 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=32.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
.++|||+|..|+-+|..|++. |.+|+|+|+++..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDKI 182 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSCC
T ss_pred EEEEECCccchhhhHHHHHhc-CCcceeeeeeccc
Confidence 699999999999999999998 9999999999864
No 279
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=91.35 E-value=0.15 Score=50.74 Aligned_cols=34 Identities=21% Similarity=0.410 Sum_probs=31.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGERV 183 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCcc
Confidence 799999999999999999998 9999999998854
No 280
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=91.14 E-value=0.22 Score=47.27 Aligned_cols=54 Identities=17% Similarity=0.264 Sum_probs=39.3
Q ss_pred CCCEEEEcCcEEEEEEecCCCeEEEEEEEec-CCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 224 RTNLYVLKRSKVTKVIINDQNVATGVEYVNS-KGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 224 ~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~-~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
+.|++++++++|.+|..+ + ++.+|++.+. +|+..++.++ .||+|+|.--++.++
T Consensus 203 ~~gV~v~~~~~v~~i~~~-~-~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 257 (335)
T 2a87_A 203 NDKIRFLTNHTVVAVDGD-T-TVTGLRVRDTNTGAETTLPVT-GVFVAIGHEPRSGLV 257 (335)
T ss_dssp CTTEEEECSEEEEEEECS-S-SCCEEEEEEETTSCCEEECCS-CEEECSCEEECCTTT
T ss_pred cCCcEEEeCceeEEEecC-C-cEeEEEEEEcCCCceEEeecC-EEEEccCCccChhHh
Confidence 468999999999999765 3 5667777642 4655679998 699999965444433
No 281
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.07 E-value=0.11 Score=45.99 Aligned_cols=31 Identities=23% Similarity=0.405 Sum_probs=29.4
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
|+|||+|..|..+|..|.++ |.+|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 89999999999999999998 99999999865
No 282
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=90.92 E-value=0.24 Score=46.57 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++. |.+|.++++.+..
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNI-ASEVHLIHRRDGF 180 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCcc
Confidence 3699999999999999999998 9999999998743
No 283
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=90.84 E-value=0.23 Score=46.50 Aligned_cols=32 Identities=16% Similarity=0.354 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|.|||+|..|...|..|+++ |.+|+++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 499999999999999999998 99999999865
No 284
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.82 E-value=0.12 Score=51.81 Aligned_cols=34 Identities=15% Similarity=0.351 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.++|||+|..|+-+|..|++. |.+|.|+|+.+.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~ 211 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRI-GSEVTVVEFASE 211 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCc
Confidence 3699999999999999999998 999999999873
No 285
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.76 E-value=0.17 Score=46.88 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|.|||+|..|...|..|+++ |.+|++.++.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 489999999999999999998 99999999875
No 286
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=90.75 E-value=0.2 Score=44.85 Aligned_cols=52 Identities=19% Similarity=0.325 Sum_probs=39.1
Q ss_pred hhhhcccCCC-CCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCch
Q psy1059 215 AYLTPIAGKR-TNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 274 (512)
Q Consensus 215 ~~l~~~~~~~-~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~ 274 (512)
.+|...+ ++ .|++++ +++|++|..+ ++++.+|.+.+ |+ +++++ .||+|+|.+
T Consensus 72 ~~l~~~~-~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~--g~--~i~a~-~VV~A~G~~ 124 (232)
T 2cul_A 72 ARAKYLL-EGLRPLHLF-QATATGLLLE-GNRVVGVRTWE--GP--PARGE-KVVLAVGSF 124 (232)
T ss_dssp HHHHHHH-HTCTTEEEE-ECCEEEEEEE-TTEEEEEEETT--SC--CEECS-EEEECCTTC
T ss_pred HHHHHHH-HcCCCcEEE-EeEEEEEEEe-CCEEEEEEECC--CC--EEECC-EEEECCCCC
Confidence 3444444 34 599999 6799999988 77888887644 64 68998 799999975
No 287
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=90.65 E-value=0.21 Score=50.05 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 178 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 178 RLAVIGSSVVALELAQAFARL-GSKVTVLARNTL 210 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEEECCc
Confidence 699999999999999999998 999999999873
No 288
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.61 E-value=0.25 Score=43.48 Aligned_cols=34 Identities=15% Similarity=0.270 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.+.|||+|..|...|..|+++ |.+|.++++.+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHH
Confidence 3599999999999999999998 999999998753
No 289
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.45 E-value=0.17 Score=50.73 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|+|||+|..|+-+|..|++. |.+|+++++.+
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~ 230 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRT 230 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCSEEEEECSS
T ss_pred EEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECC
Confidence 599999999999999999998 99999999876
No 290
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.44 E-value=0.23 Score=43.97 Aligned_cols=33 Identities=6% Similarity=0.146 Sum_probs=29.9
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
.--|+|||+|-.|...|..|.+. |.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 34699999999999999999998 9999999864
No 291
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.35 E-value=0.24 Score=45.96 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=29.3
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
|.|||+|..|...|..|+++ |.+|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQ-GHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCCEEEEEcCc
Confidence 88999999999999999998 99999999875
No 292
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.23 E-value=0.2 Score=47.72 Aligned_cols=32 Identities=34% Similarity=0.471 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||+|..|+..|..|+++ |.+|.++++..
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~~ 36 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALA-GEAINVLARGA 36 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHT-TCCEEEECCHH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCEEEEEEChH
Confidence 499999999999999999998 99999999853
No 293
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=90.21 E-value=0.17 Score=51.83 Aligned_cols=33 Identities=9% Similarity=0.291 Sum_probs=31.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.|+|||+|..|+-+|..|++. +.+|.|++|.+.
T Consensus 193 rV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 193 RVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSAN 225 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred EEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 599999999999999999998 999999999985
No 294
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.17 E-value=0.27 Score=46.70 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
--|.|||+|..|..+|..|+++ |. +|.++|..+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 4699999999999999999997 88 999999875
No 295
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=90.15 E-value=0.3 Score=46.16 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++. |.+|.++++++..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~-g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKY-GSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCcc
Confidence 4599999999999999999998 9999999998753
No 296
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=90.10 E-value=0.26 Score=48.33 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=31.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 144 ~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 144 HVVVIGAGFIGLEFAATARAK-GLEVDVVELAPRV 177 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSST
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCcc
Confidence 599999999999999999998 9999999998754
No 297
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=89.82 E-value=0.26 Score=48.51 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEecCCch
Confidence 3599999999999999999998 9999999998864
No 298
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=89.82 E-value=0.27 Score=49.22 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=31.5
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLDR 206 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCc
Confidence 3699999999999999999998 999999999874
No 299
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.80 E-value=0.22 Score=45.13 Aligned_cols=34 Identities=21% Similarity=0.437 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~ 45 (512)
..|+|||+|..|+.+|..|++. |. +|+|+|+...
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCCc
Confidence 4699999999999999999998 86 8999999763
No 300
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=89.77 E-value=0.31 Score=45.79 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+.|||+|..|+..|..|+ + |.+|.++.|.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 4899999999999999999 8 99999999975
No 301
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.73 E-value=0.15 Score=47.56 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+.|||+|..|+..|..|+++ |.+|.+++|..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 489999999999999999998 99999999874
No 302
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=89.64 E-value=0.28 Score=49.34 Aligned_cols=33 Identities=27% Similarity=0.268 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.++|||+|..|+-+|..|++. |.+|.++|+++.
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSAL-GSKTSLMIRHDK 221 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHc-CCeEEEEEeCCc
Confidence 699999999999999999998 999999999873
No 303
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.31 E-value=0.3 Score=46.06 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
-|.|||+|..|...|..|+++ |. +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 599999999999999999998 88 999999864
No 304
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=89.31 E-value=0.24 Score=51.37 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
.++|||+|..|+-+|..|++. |.+|+|+|+.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASL-GGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEECC
Confidence 599999999999999999998 9999999987
No 305
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.28 E-value=0.28 Score=49.19 Aligned_cols=33 Identities=18% Similarity=0.467 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
..|.|||.|..|+..|..|+++ |.+|+++++.+
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 4589999999999999999998 99999999864
No 306
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.28 E-value=0.21 Score=45.84 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.--|+|||+|-.|...|..|.+. |.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCC
Confidence 34599999999999999999998 99999998753
No 307
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.80 E-value=0.24 Score=40.50 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-+.|||+|..|...|..|.+. |.+|.+.++..
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYP-QYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 599999999999999999987 99999999865
No 308
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.80 E-value=0.33 Score=45.53 Aligned_cols=32 Identities=34% Similarity=0.321 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||+|..|...|..|+++ |.+|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 499999999999999999998 99999999854
No 309
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.78 E-value=0.32 Score=45.86 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|.|||+|..|...|..|+++ |++|.+.|+.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999998 99999999875
No 310
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.66 E-value=0.25 Score=49.35 Aligned_cols=32 Identities=31% Similarity=0.534 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|||+|+|-.|..+|..|++. |.+|+|||+.+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCST-TEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 399999999999999999998 99999999976
No 311
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=88.23 E-value=0.4 Score=48.75 Aligned_cols=35 Identities=9% Similarity=0.176 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+.+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecCcc
Confidence 4699999999999999999998 9999999998753
No 312
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.21 E-value=0.42 Score=47.71 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||+|..|...|..|+++ |.+|+++|+.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 499999999999999999998 99999999865
No 313
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.19 E-value=0.41 Score=44.46 Aligned_cols=33 Identities=18% Similarity=0.340 Sum_probs=30.0
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+--|.|||+|..|...|..|+ + |++|++.|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 346899999999999999999 8 99999999875
No 314
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.18 E-value=0.37 Score=45.49 Aligned_cols=30 Identities=37% Similarity=0.638 Sum_probs=27.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
.|.|||+|..|+..|..|+++ |.+|.++ +.
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 489999999999999999998 9999999 54
No 315
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=88.13 E-value=0.38 Score=47.63 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|.|||+|..|...|..|+++ |.+|+++|+.+
T Consensus 56 kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLA-GIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECcH
Confidence 499999999999999999998 99999999976
No 316
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=87.92 E-value=0.39 Score=47.26 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=31.8
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+...+.|||.|..|+.+|..||++ |.+|+.+|-.+
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 456799999999999999999998 99999999765
No 317
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.83 E-value=0.4 Score=45.98 Aligned_cols=33 Identities=33% Similarity=0.300 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|.|||+|..|...|..|+++ |.+|.+.++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 3599999999999999999998 99999999864
No 318
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.73 E-value=0.33 Score=41.50 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhCCC-CCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVS-SLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~-g~~VlvlE~g~ 44 (512)
.|+|||.|..|..+|..|.+ . |.+|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~-~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRA-RYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHH-HHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHh-ccCCeEEEEECCH
Confidence 59999999999999999986 4 89999999865
No 319
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=87.70 E-value=0.47 Score=43.78 Aligned_cols=32 Identities=19% Similarity=0.090 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|+-+|..|++. | +|.++++++
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~ 173 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGI 173 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTT
T ss_pred CEEEEEecCccHHHHHHHhhhc-C-cEEEEECCC
Confidence 4699999999999999999998 8 999999876
No 320
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=87.66 E-value=0.3 Score=49.77 Aligned_cols=32 Identities=19% Similarity=0.174 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|..|+-.|..+++. |.+|+|+++..
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~~ 256 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSL-GYDVTVAVRSI 256 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHH-TCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCeEEEecccc
Confidence 599999999999999999998 99999999854
No 321
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=87.63 E-value=0.42 Score=47.47 Aligned_cols=32 Identities=31% Similarity=0.420 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||.|..|+..|..|+++ |.+|+++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 489999999999999999998 99999999875
No 322
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=87.52 E-value=0.58 Score=43.58 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++. |.+|.++++.+..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~-g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANI-CSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTT-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCCCC
Confidence 3699999999999999999998 9999999998753
No 323
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=87.28 E-value=0.43 Score=44.65 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++. |.+|.++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~-g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSY-STKVYLIHRRDTF 189 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCeEEEEEeCCCC
Confidence 4699999999999999999998 9999999998754
No 324
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=87.17 E-value=0.4 Score=48.72 Aligned_cols=31 Identities=26% Similarity=0.325 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
.++|||+|..|+-+|..|++. |.+|+++|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGI-GLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHc-CCeEEEEecc
Confidence 499999999999999999998 9999999985
No 325
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.13 E-value=0.59 Score=44.10 Aligned_cols=32 Identities=28% Similarity=0.488 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
-|.|||+|..|..+|..|+.+ |. +|.++|...
T Consensus 6 kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 499999999999999999998 88 999999865
No 326
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.06 E-value=0.44 Score=47.18 Aligned_cols=31 Identities=29% Similarity=0.346 Sum_probs=29.1
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+.|||+|..|+..|..|+++ |.+|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 88999999999999999998 99999999864
No 327
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.05 E-value=0.48 Score=45.40 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||+|..|...|..|+++ |.+|.++++.+
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~~ 37 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDA 37 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 599999999999999999998 99999999864
No 328
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=86.95 E-value=0.21 Score=49.53 Aligned_cols=45 Identities=16% Similarity=0.225 Sum_probs=37.9
Q ss_pred CCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCch
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 274 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~ 274 (512)
++.|++|+++++|++|..+ ++++++|.. +|+ +++|+ .||+|+|.+
T Consensus 245 ~~~G~~i~~~~~V~~I~~~-~~~v~~v~~---~g~--~~~ad-~VV~a~~~~ 289 (433)
T 1d5t_A 245 AIYGGTYMLNKPVDDIIME-NGKVVGVKS---EGE--VARCK-QLICDPSYV 289 (433)
T ss_dssp HHHTCCCBCSCCCCEEEEE-TTEEEEEEE---TTE--EEECS-EEEECGGGC
T ss_pred HHcCCEEECCCEEEEEEEe-CCEEEEEEE---CCe--EEECC-EEEECCCCC
Confidence 4678999999999999988 888888773 465 68998 699999976
No 329
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.94 E-value=0.52 Score=44.81 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+..+.|||+|..|+..|..|+++ |.+|.++++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 35699999999999999999998 99999999864
No 330
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=86.90 E-value=0.56 Score=45.49 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
--|+|||+|.+|+.+|..|... |.+|+++|+.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL-GAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 4699999999999999999988 99999999976
No 331
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=86.87 E-value=0.42 Score=49.52 Aligned_cols=51 Identities=12% Similarity=0.154 Sum_probs=39.0
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCC--CeEEEEEEEecCCeEEEEecCcEEEEcCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQ--NVATGVEYVNSKGETVRVTANKEVILTAG 272 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~--~~v~GV~~~~~~g~~~~v~A~k~VVlaaG 272 (512)
..|.+++ +..|++++++++|.+|+++ + ++++||... +|+ +++|+ .||.++.
T Consensus 382 qaL~r~~-~~~Gg~i~l~~~V~~I~~~-~~~g~v~gV~~~--~Ge--~i~A~-~VVs~~~ 434 (650)
T 1vg0_A 382 QCFCRMC-AVFGGIYCLRHSVQCLVVD-KESRKCKAVIDQ--FGQ--RIISK-HFIIEDS 434 (650)
T ss_dssp HHHHHHH-HHTTCEEESSCCEEEEEEE-TTTCCEEEEEET--TSC--EEECS-EEEEEGG
T ss_pred HHHHHHH-HHcCCEEEeCCEeeEEEEe-CCCCeEEEEEeC--CCC--EEEcC-EEEEChh
Confidence 3344455 6789999999999999998 5 899998843 476 68897 5777554
No 332
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.83 E-value=0.39 Score=47.11 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.|||||.|-.|..+|..|.+. |.+|++||+.+.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~ 38 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPD 38 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHH
Confidence 599999999999999999998 999999998763
No 333
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=86.82 E-value=0.53 Score=44.04 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=28.8
Q ss_pred EEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
|.|||+|..|..+|..|+.+ |. .|.++|...
T Consensus 3 I~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 88999999999999999998 88 999999864
No 334
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.79 E-value=0.61 Score=40.86 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=28.7
Q ss_pred EEEEC-CChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVG-ASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVG-sG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+.||| +|..|...|..|+++ |.+|.++++.+
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~ 34 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATL-GHEIVVGSRRE 34 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTT-TCEEEEEESSH
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 78999 999999999999998 99999999864
No 335
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=86.77 E-value=0.54 Score=44.28 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
-|.|||+|..|...|..|+++ |. +|.++|+.+
T Consensus 6 kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 599999999999999999998 88 999999875
No 336
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=86.68 E-value=0.62 Score=46.47 Aligned_cols=54 Identities=11% Similarity=0.116 Sum_probs=40.9
Q ss_pred CCCCEEEEcCcEEEEEEecCCC-eEEEEEEEec-------------CCeEEEEecCcEEEEcCCchhcH
Q psy1059 223 KRTNLYVLKRSKVTKVIINDQN-VATGVEYVNS-------------KGETVRVTANKEVILTAGAIANA 277 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~~~-~v~GV~~~~~-------------~g~~~~v~A~k~VVlaaGa~~t~ 277 (512)
...|+++++++.+.+|.-++++ ++.+|++.+. +|+..++.++ .||+|.|.-.++
T Consensus 268 ~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d-~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 268 ASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCG-LVLSSIGYKSRP 335 (460)
T ss_dssp CSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECS-EEEECCCEECCC
T ss_pred CCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcC-EEEECCCCCCCC
Confidence 3578999999999999765226 8888887631 3555689998 799999976555
No 337
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=86.64 E-value=0.59 Score=46.26 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
...+.|||.|..|+..|..|+++ |.+|+++++.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 45689999999999999999998 999999999874
No 338
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.57 E-value=0.42 Score=45.35 Aligned_cols=29 Identities=28% Similarity=0.359 Sum_probs=27.9
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEA 42 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~ 42 (512)
|.|||+|..|...|..|+++ |.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 88999999999999999998 999999998
No 339
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.55 E-value=0.59 Score=44.16 Aligned_cols=35 Identities=20% Similarity=0.499 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~ 45 (512)
..-|+|||+|..|+.+|..|+.. |. ++.|+|....
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCEe
Confidence 35699999999999999999998 86 7999998764
No 340
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=86.42 E-value=0.5 Score=47.04 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|.|||.|.+|+++|..|.++ |++|.+.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL-GAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT-TCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 3599999999999999999998 99999999975
No 341
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=86.41 E-value=0.59 Score=46.65 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~ 45 (512)
.|.|||.|..|+..|..|++++|. +|+++++.+.
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 599999999999999999986589 9999999874
No 342
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=86.40 E-value=0.56 Score=47.15 Aligned_cols=35 Identities=29% Similarity=0.404 Sum_probs=32.0
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++. |.+|.++|+++..
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGL-GVKTTLLHRGDLI 226 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHc-CCeEEEEECCCcc
Confidence 3699999999999999999998 9999999998753
No 343
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=86.37 E-value=0.59 Score=42.89 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-++|+|+|.+|..+|..|++. |.+|.++.|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSL-DCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 599999999999999999998 99999998864
No 344
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=86.34 E-value=0.62 Score=44.08 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
--|.|||+|..|..+|..|+.+ |. +|.++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 3699999999999999999998 88 999999865
No 345
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=86.25 E-value=0.51 Score=45.46 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||+|..|...|..|+++ |.+|.++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999998 99999999864
No 346
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=86.21 E-value=0.67 Score=44.02 Aligned_cols=32 Identities=19% Similarity=0.370 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|+|||+|..|+-+|..|++. | +|.++++..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCC
Confidence 3699999999999999999998 7 699999874
No 347
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=86.16 E-value=0.53 Score=46.88 Aligned_cols=33 Identities=6% Similarity=0.053 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
-.|+|||+|..|+-+|..|.+. |. +|.++++.+
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCC
Confidence 3699999999999999999988 87 599999976
No 348
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=86.03 E-value=0.67 Score=43.14 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.|.|||.|..|...|..|+++ |.+|.+.++.+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 4699999999999999999998 999999998763
No 349
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.78 E-value=0.55 Score=42.35 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.+.|||+|..|...|..|+++ |.+|++.++.+
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~ 52 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDP 52 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 4589999999999999999998 99999999875
No 350
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=85.75 E-value=0.66 Score=42.93 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 389999999999999999998 99999999875
No 351
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=85.62 E-value=0.67 Score=43.48 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4699999999999999999998 99999999875
No 352
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=85.53 E-value=0.48 Score=47.22 Aligned_cols=46 Identities=15% Similarity=0.055 Sum_probs=37.2
Q ss_pred CCCCEEEEcCcEEEEEEecC-CCeEEEEEEEecCCeEEEEecCcEEEEcCCch
Q psy1059 223 KRTNLYVLKRSKVTKVIIND-QNVATGVEYVNSKGETVRVTANKEVILTAGAI 274 (512)
Q Consensus 223 ~~~g~~v~~~~~V~~i~~~~-~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~ 274 (512)
++.|++|+++++|++|..+. ++++++|+. +|+ +++|+ .||+|+|.+
T Consensus 253 ~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~---~g~--~~~ad-~VV~a~~~~ 299 (453)
T 2bcg_G 253 AIYGGTYMLDTPIDEVLYKKDTGKFEGVKT---KLG--TFKAP-LVIADPTYF 299 (453)
T ss_dssp HHTTCEEECSCCCCEEEEETTTTEEEEEEE---TTE--EEECS-CEEECGGGC
T ss_pred HHcCCEEECCCEEEEEEEECCCCeEEEEEE---CCe--EEECC-EEEECCCcc
Confidence 46799999999999998762 578888875 365 68998 599999976
No 353
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.45 E-value=0.65 Score=45.41 Aligned_cols=29 Identities=10% Similarity=0.256 Sum_probs=27.1
Q ss_pred cEEEECCChhHHHHHHHHhC-CCCCeEEEEc
Q psy1059 12 DIIIVGASAAGCVLANRLSE-VSSLKVLLIE 41 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~-~~g~~VlvlE 41 (512)
.|.|||+|..|+..|..|++ + |.+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~-G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRD-GVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-TEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CCEEEEEe
Confidence 48999999999999999987 5 99999998
No 354
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=85.43 E-value=0.48 Score=42.36 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.++|||+|..|..+|..|.+. |. |+++|+.+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 3599999999999999999988 99 99999875
No 355
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=85.41 E-value=0.51 Score=45.32 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
.+.-|+|+|+|.+|..+|..|... |. +|.|+|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 346799999999999999999988 88 999999975
No 356
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=85.35 E-value=0.79 Score=42.71 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=29.5
Q ss_pred cEEEEC-CChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVG-ASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVG-sG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.||| .|..|.+.|..|++. |.+|.++++.+
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 599999 999999999999998 99999998764
No 357
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=85.22 E-value=0.52 Score=45.15 Aligned_cols=35 Identities=20% Similarity=0.448 Sum_probs=31.2
Q ss_pred CcccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 9 DCFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 9 ~~~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
++--|+|+|+|.+|..+|..|... |. +|.|+|+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 456799999999999999999988 88 899999974
No 358
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=85.21 E-value=0.69 Score=40.76 Aligned_cols=33 Identities=24% Similarity=0.236 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.+.|||+|..|...|..|++. |.+|.++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS-GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3599999999999999999998 99999999864
No 359
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=85.19 E-value=0.5 Score=46.85 Aligned_cols=33 Identities=9% Similarity=0.221 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-|.|||.|.+|+++|..|+++ |.+|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTT-TCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCEEEEEECCCC
Confidence 389999999999999999998 999999998764
No 360
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=85.08 E-value=0.58 Score=44.98 Aligned_cols=33 Identities=12% Similarity=0.130 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|+|||+|..|..+|..|... |.+|+++++.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL-GAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999887 99999999876
No 361
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=85.05 E-value=0.88 Score=41.54 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.++|||+|.+|..+|+.|++. |.+|.|+.|...
T Consensus 119 k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ-GLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 4599999999999999999998 899999998763
No 362
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.03 E-value=0.65 Score=43.39 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 3599999999999999999998 99999999865
No 363
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=84.98 E-value=0.77 Score=43.27 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 3699999999999999999998 99999999875
No 364
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=84.95 E-value=0.76 Score=41.62 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~ 45 (512)
..|+|||+|..|+.+|..|+.. |. ++.|+|....
T Consensus 29 ~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~v 63 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDDV 63 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCBC
T ss_pred CcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCCc
Confidence 4699999999999999999998 86 7899998763
No 365
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=84.86 E-value=0.66 Score=46.45 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|.|||+|..|...|..|+++ |.+|++.|+.+
T Consensus 7 kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 489999999999999999998 99999999865
No 366
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=84.74 E-value=0.65 Score=42.95 Aligned_cols=35 Identities=31% Similarity=0.512 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~ 45 (512)
..-|+|||+|..|+.+|..|+.. |. ++.|+|....
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCcc
Confidence 46799999999999999999998 85 8999998764
No 367
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=84.34 E-value=0.91 Score=42.73 Aligned_cols=32 Identities=16% Similarity=0.149 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCC-CeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g-~~VlvlE~g~ 44 (512)
.|.|||.|..|...|..|+++ | .+|.+.++.+
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 499999999999999999998 9 9999999975
No 368
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=84.27 E-value=0.98 Score=42.03 Aligned_cols=32 Identities=13% Similarity=0.180 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
.++|||+|.+|..+|..|++. |. +|.|..|..
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~~ 175 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLST-AAERIDMANRTV 175 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECSSH
T ss_pred EEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 599999999999999999998 97 999998864
No 369
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=84.13 E-value=0.86 Score=42.77 Aligned_cols=31 Identities=26% Similarity=0.442 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC-eEEEEcCc
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 43 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g 43 (512)
.|.|||+|..|..+|..|+.+ |. .|.++|..
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 599999999999999999998 98 99999997
No 370
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=84.10 E-value=0.67 Score=45.57 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
...-|||.|..|+..|..|+++ |.+|+++++.+.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCHH
Confidence 4578999999999999999998 999999998763
No 371
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=83.91 E-value=1 Score=42.06 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.-.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 34699999999999999999998 99999999865
No 372
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=83.88 E-value=0.86 Score=44.44 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|+|||+|.+|+.+|..|... |.+|+++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 3599999999999999999887 99999999865
No 373
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=83.82 E-value=1 Score=41.73 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-++|+|+|..|..+|..|++. | +|.++.|..
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~~ 160 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKD-N-NIIIANRTV 160 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSS-S-EEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC-C-CEEEEECCH
Confidence 499999999999999999998 9 999998854
No 374
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=83.78 E-value=0.75 Score=42.91 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 489999999999999999998 99999999865
No 375
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=83.76 E-value=0.87 Score=45.19 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-++|+|+|..|..+|..|+.. |.+|++.|+.+
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~~ 298 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQA-GARVIVTEIDP 298 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 489999999999999999998 99999999864
No 376
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=83.73 E-value=0.92 Score=45.49 Aligned_cols=33 Identities=15% Similarity=0.308 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhCC-CCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~-~g~~VlvlE~g~ 44 (512)
.|.|||.|..|+..|..|+++ +|.+|+++++.+
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 599999999999999999986 368999999864
No 377
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=83.63 E-value=0.48 Score=47.44 Aligned_cols=56 Identities=20% Similarity=0.192 Sum_probs=40.0
Q ss_pred hhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 217 LTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 217 l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
|...+ ++.|++|+++++|++|..+ ++++..|.+ ++. ++.++ .||+|+++....+||
T Consensus 240 l~~~l-~~~g~~i~~~~~V~~i~~~-~~~~~~v~~---~~~--~~~ad-~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 240 LETHL-TSRGVSVLRGQPVCGLSLQ-AEGRWKVSL---RDS--SLEAD-HVISAIPASVLSELL 295 (477)
T ss_dssp HHHHH-HHTTCEEECSCCCCEEEEC-GGGCEEEEC---SSC--EEEES-EEEECSCHHHHHHHS
T ss_pred HHHHH-HhcCCEEEeCCEEEEEEEc-CCceEEEEE---CCe--EEEcC-EEEECCCHHHHHHhc
Confidence 33334 4569999999999999987 554344433 344 58998 699999987666654
No 378
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=83.61 E-value=0.73 Score=43.44 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=28.8
Q ss_pred EEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
|.|||+|..|...|..|+++ |. +|.++|+.+
T Consensus 3 I~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 78999999999999999997 88 999999864
No 379
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=83.48 E-value=0.67 Score=42.91 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-TCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 389999999999999999998 99999999875
No 380
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=83.46 E-value=1.5 Score=40.90 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=29.9
Q ss_pred cccEEEECCC-hhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGAS-AAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG-~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.-.++|||+| +.|..+|..|.+. |.+|+++++..
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~~ 211 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLAND-GATVYSVDVNN 211 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSSE
T ss_pred CCEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCch
Confidence 4579999999 6799999999998 99999998863
No 381
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=83.45 E-value=0.64 Score=46.96 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhCC-------------CCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEV-------------SSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~-------------~g~~VlvlE~g~~ 45 (512)
.++|||+|+.|+-+|..|++. ...+|.|+|+++.
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~ 265 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI 265 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc
Confidence 599999999999999998753 1368999999984
No 382
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=83.34 E-value=1.1 Score=42.07 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=28.8
Q ss_pred EEEECCChhHHHHHHHHhCC-CCCeEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEV-SSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~-~g~~VlvlE~g~ 44 (512)
|.|||+|..|...|..|+++ .|.+|.++|+.+
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 88999999999999999985 278999999975
No 383
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=83.18 E-value=0.54 Score=41.59 Aligned_cols=32 Identities=28% Similarity=0.510 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEE-EcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLL-IEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~Vlv-lE~g~ 44 (512)
.+.|||+|..|...|..|+++ |.+|.+ .++.+
T Consensus 25 kI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~ 57 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAA-QIPAIIANSRGP 57 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCH
Confidence 599999999999999999998 999998 78765
No 384
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=83.10 E-value=0.71 Score=49.06 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=30.2
Q ss_pred cEEEEC--CChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVG--ASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVG--sG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|+||| +|..|+-+|..|++. |.+|.|+|+.+
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc
Confidence 699998 999999999999998 99999999986
No 385
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=83.00 E-value=1 Score=41.37 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=28.8
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
+.|||+|..|...|..|++. |.+|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 78999999999999999998 99999998864
No 386
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=82.99 E-value=0.8 Score=42.91 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCC--CeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSS--LKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g--~~VlvlE~g~ 44 (512)
-|.|||+|..|..+|..|+++ | .+|.++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 389999999999999999998 8 6999999864
No 387
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=82.94 E-value=0.91 Score=43.75 Aligned_cols=33 Identities=15% Similarity=0.301 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
--|+|+|+|..|..+|..|... |.+|+++++.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM-GAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 3599999999999999999988 99999999864
No 388
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=82.89 E-value=0.92 Score=43.56 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|+|+|+|.+|..+|..|... |.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4699999999999999999988 99999999864
No 389
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=82.82 E-value=0.67 Score=44.84 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCC-------CeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSS-------LKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g-------~~VlvlE~g~~ 45 (512)
.|.|||+|..|...|..|+++ | .+|.++++.+.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChh
Confidence 499999999999999999998 8 89999998763
No 390
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=82.78 E-value=0.97 Score=42.42 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|.|||+|..|...|..|++. |.+|.++++.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3599999999999999999998 99999999865
No 391
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=82.71 E-value=1.3 Score=42.89 Aligned_cols=50 Identities=12% Similarity=0.075 Sum_probs=37.4
Q ss_pred CCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhc
Q psy1059 224 RTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIAN 276 (512)
Q Consensus 224 ~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t 276 (512)
+.|++++.+++|++|..+ ++....|++.+ +|+..+++++ .||.|.|....
T Consensus 115 ~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~-~g~~~~~~a~-~vV~AdG~~S~ 164 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDL-QGERPYVTFER-DGERLRLDCD-YIAGCDGFHGI 164 (394)
T ss_dssp HTTCEEESSCEEEEEECT-TSSSCEEEEEE-TTEEEEEECS-EEEECCCTTCS
T ss_pred hcCCeEEeceeEEEEEEe-cCCceEEEEec-CCcEEEEEeC-EEEECCCCCcH
Confidence 469999999999999876 33333466634 5876679998 79999997543
No 392
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=82.67 E-value=1.2 Score=45.38 Aligned_cols=34 Identities=21% Similarity=0.531 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~ 45 (512)
..|+|||+|..|+.+|..|+.. |. ++.|+|....
T Consensus 328 ~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~V 362 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 362 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSBC
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCcc
Confidence 5699999999999999999998 87 7999998764
No 393
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=82.57 E-value=0.72 Score=42.34 Aligned_cols=32 Identities=19% Similarity=0.201 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-++|+|+|.+|..+|..|++. |.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQA-QQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHT-TCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 599999999999999999998 89999998864
No 394
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=82.56 E-value=1 Score=47.65 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|.|||+|..|...|..|+++ |++|+++|+.+
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCH
Confidence 499999999999999999998 99999999875
No 395
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.39 E-value=0.64 Score=44.51 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCC-------CeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSS-------LKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g-------~~VlvlE~g~~ 45 (512)
.|.|||+|..|...|..|+++ | .+|.++++.+.
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChh
Confidence 599999999999999999998 8 89999998763
No 396
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=82.32 E-value=1.2 Score=43.30 Aligned_cols=33 Identities=12% Similarity=0.229 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|+|||+|.+|+.+|..|... |.+|++.++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999887 99999999875
No 397
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=82.28 E-value=1.2 Score=41.65 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
-|.|||+|..|..+|..|+.. |. +|.++|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 499999999999999999988 86 899999864
No 398
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=82.28 E-value=0.91 Score=41.27 Aligned_cols=31 Identities=13% Similarity=0.374 Sum_probs=28.7
Q ss_pred EEEECCChhHHHHHHHHhCCCC-CeEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSS-LKVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g-~~VlvlE~g~ 44 (512)
|.|||+|..|...|..|+++ | .+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~~ 34 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGA 34 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHH-CSCEEEEECSSH
T ss_pred EEEECchHHHHHHHHHHHHC-CCCeEEEECCCH
Confidence 78999999999999999998 9 9999999864
No 399
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=82.15 E-value=1.1 Score=42.02 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
-|.|||.|..|.+.|..|+++ |. +|.+.++.+
T Consensus 35 kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 599999999999999999998 98 999999865
No 400
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=82.09 E-value=1.1 Score=45.65 Aligned_cols=35 Identities=20% Similarity=0.499 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~ 45 (512)
..-|+|||+|..|+.+|..|+.. |. ++.|+|....
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCCC
Confidence 35699999999999999999998 86 7999998764
No 401
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=81.76 E-value=1.1 Score=41.19 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=29.8
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
|+|.|+|..|..++.+|.++ |.+|.++.|...
T Consensus 6 ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~~ 37 (286)
T 3gpi_A 6 ILIAGCGDLGLELARRLTAQ-GHEVTGLRRSAQ 37 (286)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCCEEEEECTTS
T ss_pred EEEECCCHHHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 99999999999999999998 999999998753
No 402
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=81.72 E-value=1.2 Score=40.99 Aligned_cols=32 Identities=13% Similarity=0.208 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|+|.|+|..|..++.+|.++ |.+|.++.|.+
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGG-TCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHC-CCEEEEEEcCh
Confidence 399999999999999999998 99999999865
No 403
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=81.59 E-value=1.2 Score=42.61 Aligned_cols=33 Identities=12% Similarity=0.286 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
--|+|+|+|..|..+|.+|.+. |.+|++.|+..
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~~ 206 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE-GAKLVVTDVNK 206 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 3499999999999999999998 99999998643
No 404
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=81.58 E-value=1.2 Score=41.38 Aligned_cols=31 Identities=13% Similarity=0.229 Sum_probs=28.9
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
|.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 88999999999999999998 99999999865
No 405
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=81.58 E-value=1.3 Score=38.73 Aligned_cols=31 Identities=26% Similarity=0.283 Sum_probs=28.6
Q ss_pred EEEECC-ChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGs-G~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
|+|+|+ |..|..++.+|+++ |.+|.++.|.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 899995 99999999999998 99999999875
No 406
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=81.55 E-value=1.3 Score=40.89 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
--++|+|+|-+|..+|..|++. |. +|.|+.|..
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECCH
Confidence 3599999999999999999998 88 799998864
No 407
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=81.37 E-value=1.2 Score=40.89 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
-.++|||+|.+|..+|..|++. |. +|.|+.|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 3599999999999999999998 98 899998875
No 408
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=81.21 E-value=0.91 Score=45.40 Aligned_cols=36 Identities=19% Similarity=0.321 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
-.++|||+|..|+-+|..|++..|.+|.++|+.+..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 469999999999999999987338999999998753
No 409
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=81.20 E-value=1.3 Score=44.27 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-+|.|||.|..|...|..|+++ |.+|.+.+|.+
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~ 48 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSR 48 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred CeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 4699999999999999999998 99999999864
No 410
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=81.16 E-value=1.3 Score=40.74 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=28.5
Q ss_pred EEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
|.|||.|..|...|..|++. |. +|.+.++.+
T Consensus 4 I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 36 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCH
Confidence 88999999999999999988 88 899998864
No 411
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=81.14 E-value=1.2 Score=41.31 Aligned_cols=32 Identities=9% Similarity=0.238 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||.|..|...|..|++. |.+|.++++.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 499999999999999999998 99999999864
No 412
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=81.02 E-value=1 Score=42.23 Aligned_cols=32 Identities=16% Similarity=0.281 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCc
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 43 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g 43 (512)
-.|.|||.|..|...|..|+++ |. +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 4599999999999999999998 99 99999985
No 413
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=80.99 E-value=1.6 Score=40.19 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=29.6
Q ss_pred cEEEECC-ChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGs-G~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||+ |..|...|..|+++ |.+|.++++.+
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDS-AHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 5999999 99999999999998 99999999864
No 414
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=80.86 E-value=1.3 Score=41.57 Aligned_cols=32 Identities=13% Similarity=0.201 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCc
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 43 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g 43 (512)
--++|+|+|-+|..+|..|++. |. +|.|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 3599999999999999999998 98 89999886
No 415
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=80.79 E-value=1.3 Score=44.72 Aligned_cols=35 Identities=31% Similarity=0.477 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHhC---CCCCeEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSE---VSSLKVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~---~~g~~VlvlE~g~~ 45 (512)
.+||||||+|++|+++|+.|++ + |.+|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~-G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDD-RIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGG-GSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCC-CCEEEEEecCCC
Confidence 3799999999999999999999 8 999999999763
No 416
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=80.77 E-value=1.2 Score=42.99 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
--|+|||+|..|..+|..|... |.+|+++++.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGM-GATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3599999999999999999987 99999999864
No 417
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=80.67 E-value=1.5 Score=41.24 Aligned_cols=32 Identities=25% Similarity=0.391 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
-|.|||+|..|.++|..|+.. |. +|.++|..+
T Consensus 9 kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~ 41 (324)
T 3gvi_A 9 KIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAE 41 (324)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCc
Confidence 599999999999999999987 88 999999865
No 418
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=80.67 E-value=0.52 Score=41.97 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=28.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA 42 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~ 42 (512)
.|.|||.|..|.+.|..|.++ |.+|.++++
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSV-GHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHT-TCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHC-CCEEEEecC
Confidence 599999999999999999998 999999887
No 419
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=80.59 E-value=1 Score=43.00 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~ 45 (512)
..|+|||+|..|+.+|..|+.. |. ++.|+|....
T Consensus 119 ~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~V 153 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQI 153 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCBC
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcC
Confidence 4699999999999999999998 86 7999998753
No 420
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=80.53 E-value=1.4 Score=42.23 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4699999999999999999998 99999999865
No 421
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=80.46 E-value=1.4 Score=37.96 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=29.0
Q ss_pred EEEECC-ChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGs-G~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
|+|+|+ |..|..++.+|+++ |.+|.++.|.+
T Consensus 6 ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~ 37 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDS 37 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred EEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCh
Confidence 899998 99999999999998 99999999865
No 422
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=80.46 E-value=1.3 Score=37.33 Aligned_cols=59 Identities=24% Similarity=0.146 Sum_probs=40.6
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHHHHHHcCC
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGI 285 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~lL~~Sgi 285 (512)
.++...+ ++.|++++++ +|+++..+ ++. +.+...+| ++.++ .||+|+|.. |.++...|+
T Consensus 60 ~~l~~~~-~~~gv~v~~~-~v~~i~~~-~~~---~~v~~~~g---~i~ad-~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 60 RRLEAHA-RRYGAEVRPG-VVKGVRDM-GGV---FEVETEEG---VEKAE-RLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHHH-HHTTCEEEEC-CCCEEEEC-SSS---EEEECSSC---EEEEE-EEEECCTTC--CHHHHHHTC
T ss_pred HHHHHHH-HHcCCEEEeC-EEEEEEEc-CCE---EEEEECCC---EEEEC-EEEECCCCC--CCccccCCC
Confidence 4444445 5679999999 99999876 443 23333235 68997 699999975 556666665
No 423
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=80.43 E-value=1.2 Score=42.36 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|.|||.|..|.+.|..|.++ |.+|.+.++.+
T Consensus 10 kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999998 99999999865
No 424
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=80.35 E-value=1.9 Score=40.03 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=27.9
Q ss_pred cEEEECCC---hhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGAS---AAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG---~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
=++|.|++ ..|..+|.+|+++ |.+|+++.+..
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~ 66 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSE 66 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 38888985 7899999999998 99999998864
No 425
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=80.30 E-value=1.4 Score=39.15 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=29.5
Q ss_pred cEEEECC-ChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGs-G~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|+|.|+ |..|..+|.+|+++ |.+|.++.|.+
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNK-GHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhC-CCeEEEEECCh
Confidence 4899998 99999999999998 99999999875
No 426
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=80.29 E-value=1.3 Score=41.75 Aligned_cols=33 Identities=24% Similarity=0.109 Sum_probs=29.1
Q ss_pred cEEEECCChhHHH-HHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCV-LANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~-~A~~La~~~g~~VlvlE~g~~ 45 (512)
.|.|||.|.+|++ +|..|.++ |++|.+.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHT-TCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCCCC
Confidence 4899999999996 78888888 999999999763
No 427
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=80.27 E-value=1.5 Score=42.69 Aligned_cols=30 Identities=23% Similarity=0.249 Sum_probs=27.8
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
|.|||.|..|+..|..|++ |.+|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~La~--G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSL--QNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTT--TSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhC--CCEEEEEECCH
Confidence 8899999999999999996 89999999864
No 428
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=80.25 E-value=0.99 Score=46.17 Aligned_cols=53 Identities=15% Similarity=0.190 Sum_probs=39.2
Q ss_pred hhhhcccCCCC-CEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCch
Q psy1059 215 AYLTPIAGKRT-NLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAI 274 (512)
Q Consensus 215 ~~l~~~~~~~~-g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~ 274 (512)
.+|...+ ++. |++++.+ +|++|..++++++++|++.+ |+ +++|+ .||+|+|+.
T Consensus 198 ~~L~~~~-~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~--G~--~i~ad-~vI~A~G~~ 251 (550)
T 2e4g_A 198 DFLRRFA-TEKLGVRHVED-RVEHVQRDANGNIESVRTAT--GR--VFDAD-LFVDCSGFR 251 (550)
T ss_dssp HHHHHHH-HHHSCCEEEEC-CEEEEEECTTSCEEEEEETT--SC--EEECS-EEEECCGGG
T ss_pred HHHHHHH-HhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC--CC--EEECC-EEEECCCCc
Confidence 3444444 445 9999999 99999886356777777654 64 68998 699999964
No 429
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=80.21 E-value=1.4 Score=44.19 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 599999999999999999998 99999999865
No 430
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=80.20 E-value=1.7 Score=43.16 Aligned_cols=51 Identities=10% Similarity=0.042 Sum_probs=37.8
Q ss_pred CCCEEEEcCcEEEEEEecCCCeEEEEEEEe--------------cCCeEEEEecCcEEEEcCCchhcH
Q psy1059 224 RTNLYVLKRSKVTKVIINDQNVATGVEYVN--------------SKGETVRVTANKEVILTAGAIANA 277 (512)
Q Consensus 224 ~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~--------------~~g~~~~v~A~k~VVlaaGa~~t~ 277 (512)
+.|+++++++.+.+|.-+ +++.+|++.+ .+|+..++.++ .||+|.|.-.++
T Consensus 264 ~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d-~vi~a~G~~p~~ 328 (456)
T 1lqt_A 264 HRRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQ-LVVRSVGYRGVP 328 (456)
T ss_dssp SEEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECS-EEEECSCEECCC
T ss_pred CceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcC-EEEEccccccCC
Confidence 368999999999998744 4666777653 13555679998 799999976555
No 431
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=80.17 E-value=1.6 Score=38.16 Aligned_cols=31 Identities=26% Similarity=0.283 Sum_probs=28.9
Q ss_pred EEEEC-CChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVG-ASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVG-sG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
|+|.| +|..|..++.+|+++ |.+|.++.|.+
T Consensus 3 ilItGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTT-DYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTS-SCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHC-CCEEEEEECCc
Confidence 89999 799999999999998 99999999975
No 432
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=80.02 E-value=1.1 Score=45.70 Aligned_cols=33 Identities=6% Similarity=0.324 Sum_probs=30.8
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
.|+|||+|..|+-+|..|++. +.+|.+++|.+.
T Consensus 188 ~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~ 220 (542)
T 1w4x_A 188 RVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPH 220 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred EEEEECCCccHHHHHHHHhhc-CceEEEEEcCCc
Confidence 589999999999999999998 999999999874
No 433
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=79.97 E-value=1.5 Score=38.46 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=28.9
Q ss_pred EEEECC-ChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGs-G~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
|+|.|+ |..|..+|.+|+++ |.+|.++.|.+
T Consensus 3 ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRR-GHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 899998 99999999999998 99999999865
No 434
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=79.85 E-value=1.2 Score=40.83 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.++|||+|.+|..+|..|++. |.+|.+.+|..
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKE-GAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHc-CCEEEEEECCH
Confidence 599999999999999999998 88999999864
No 435
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=79.84 E-value=1.4 Score=40.73 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=29.1
Q ss_pred cEEEEC-CChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVG-ASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVG-sG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-++|+| +|.+|..+|..|+++ |.+|.++.|..
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~~ 153 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRKL 153 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred EEEEECCCcHHHHHHHHHHHHC-cCEEEEEECCH
Confidence 589999 999999999999998 99999998853
No 436
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=79.82 E-value=1.4 Score=44.18 Aligned_cols=32 Identities=28% Similarity=0.368 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 489999999999999999998 99999999864
No 437
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=79.82 E-value=1.6 Score=39.93 Aligned_cols=33 Identities=9% Similarity=0.080 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
--++|+|+|.+|..+|..|++. |. +|.|+.|..
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~~ 154 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQA-GPSELVIANRDM 154 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-CCSEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 4599999999999999999998 95 999998864
No 438
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=79.75 E-value=1.5 Score=43.05 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=29.0
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|.|||.|..|+..|..|++ |.+|+++++.+
T Consensus 37 mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc--CCeEEEEecCH
Confidence 369999999999999999995 99999999875
No 439
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=79.72 E-value=1.7 Score=39.91 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
--++|+|+|.+|..+|..|++. |. +|.|+.|..
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQ-QPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-CCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhc-CCCeEEEEECCH
Confidence 3589999999999999999998 95 999998864
No 440
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=79.70 E-value=1.6 Score=46.13 Aligned_cols=33 Identities=18% Similarity=0.312 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
--|-|||+|..|.-.|..+|.+ |++|+|+|..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-GISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhC-CCchhcccchH
Confidence 3599999999999999999998 99999999865
No 441
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=79.58 E-value=1.4 Score=39.79 Aligned_cols=32 Identities=16% Similarity=0.331 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
-++|||+|.+|..+|+.|++. |. +|.|..|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 699999999999999999998 87 899999865
No 442
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=79.42 E-value=1.4 Score=43.89 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
--|+|||+|-.|...|..|.+. |.+|+|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEA-GARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-cCEEEEEcCC
Confidence 3599999999999999999998 9999999974
No 443
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=79.33 E-value=1.8 Score=40.73 Aligned_cols=32 Identities=31% Similarity=0.387 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
-|.|||+|..|.++|..|+.. +. +|.++|..+
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~ 39 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQ 39 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCh
Confidence 499999999999999999987 77 999999865
No 444
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=79.29 E-value=0.91 Score=49.90 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=31.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCCC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT 46 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~~ 46 (512)
.++|||+|..|+-+|..|++. |.+|.|+|+.+..
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAAT-GGVVAVIDARSSI 319 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGG-TCCSEEEESCSSC
T ss_pred eEEEEcCCHHHHHHHHHHHHc-CCcEEEEECCCcc
Confidence 599999999999999999998 9999999998753
No 445
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=79.27 E-value=1.6 Score=43.81 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
...|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 35699999999999999999998 99999999865
No 446
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=79.26 E-value=1.3 Score=40.17 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=26.8
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEA 42 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~ 42 (512)
|.|||.|..|...|..|+++ |.+|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~-g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSR-GVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHT-TCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHC-CCeEEEeCC
Confidence 78999999999999999998 999999766
No 447
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=79.21 E-value=1.3 Score=41.72 Aligned_cols=32 Identities=19% Similarity=0.395 Sum_probs=28.7
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
-|.|||+|..|.++|..|+.. |. .|.++|...
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQ-GITDELVVIDVNK 40 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCceEEEEecch
Confidence 499999999999999999987 76 899999843
No 448
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=79.14 E-value=1.5 Score=40.57 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
--+.|||.|..|..+|..|... |.+|++.++..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAAL-GAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 3599999999999999999987 99999999864
No 449
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=79.03 E-value=1.5 Score=40.35 Aligned_cols=33 Identities=9% Similarity=0.165 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
-.++|+|+|.+|..+|+.|++. |. +|.|+.|..
T Consensus 123 k~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHT-TCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 4699999999999999999998 87 899998865
No 450
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=78.99 E-value=1.6 Score=40.52 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=29.4
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+.|||.|..|...|..|++. |.+|.++++.+
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 37 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKE-GVTVYAFDLME 37 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 599999999999999999998 99999998864
No 451
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=78.93 E-value=1.3 Score=40.15 Aligned_cols=32 Identities=13% Similarity=0.266 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCC----CeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSS----LKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g----~~VlvlE~g~ 44 (512)
.|.|||.|..|...|..|+++ | .+|.+.++.+
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSK 41 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCc
Confidence 499999999999999999987 8 6899999865
No 452
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=78.85 E-value=1.4 Score=40.91 Aligned_cols=31 Identities=19% Similarity=0.135 Sum_probs=28.5
Q ss_pred EEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
|.|||+|..|.++|..|+++ |. +|.++|+.+
T Consensus 3 I~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 88999999999999999987 77 899999865
No 453
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=78.52 E-value=1.6 Score=41.16 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCC----CeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSS----LKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g----~~VlvlE~g~ 44 (512)
.|.|||+|..|...|..|+++ | .+|.+.++.+
T Consensus 24 kI~iIG~G~mG~ala~~L~~~-G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFTAA-GVLAAHKIMASSPDM 59 (322)
T ss_dssp CEEEESCSHHHHHHHHHHHHT-TSSCGGGEEEECSCT
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCCcceEEEECCCc
Confidence 599999999999999999998 8 7999998865
No 454
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=78.48 E-value=1.3 Score=42.10 Aligned_cols=35 Identities=14% Similarity=0.284 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~ 45 (512)
...|+|||.|..|+.+|..|+.. |. +++|+|-...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCCc
Confidence 35699999999999999999998 87 8999998653
No 455
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=78.48 E-value=1.7 Score=40.52 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
--+.|||.|..|..+|..|... |.+|++.++..
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAAL-GANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 3599999999999999999987 99999999864
No 456
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=78.44 E-value=1.2 Score=46.96 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|.|||+|..|...|..|+++ |++|++.|+.+
T Consensus 316 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASK-GTPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhC-CCEEEEEECCH
Confidence 499999999999999999998 99999999875
No 457
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=78.30 E-value=1.4 Score=41.43 Aligned_cols=33 Identities=27% Similarity=0.285 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
--|.|||+|..|..+|+.|+.+ |. .|.++|...
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-DLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-CCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCH
Confidence 4699999999999999999987 87 899999744
No 458
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=78.19 E-value=1.3 Score=40.29 Aligned_cols=32 Identities=16% Similarity=0.190 Sum_probs=28.4
Q ss_pred cEEEECC-C-hhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGA-S-AAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGs-G-~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
=++|.|+ | -.|..+|.+|+++ |.+|+++.+..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLE-GADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCH
Confidence 3899998 7 5999999999998 99999998864
No 459
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=77.89 E-value=1.9 Score=40.64 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=29.7
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
.--|.|||+|..|..+|+.|+.+ |. .|.|+|...
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~-~~~~el~L~Di~~ 54 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMK-DLADELALVDVIE 54 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCceEEEEeCCh
Confidence 34699999999999999999987 77 899999753
No 460
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=77.87 E-value=1.8 Score=39.32 Aligned_cols=32 Identities=28% Similarity=0.386 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+.|||+|..|...|..|.+. |.+|.+.++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 699999999999999999988 88999999864
No 461
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=77.78 E-value=1.8 Score=40.44 Aligned_cols=32 Identities=13% Similarity=0.301 Sum_probs=29.0
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCc
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAG 43 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g 43 (512)
--++|+|+|-+|..+|..|++. |. +|.|+.|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 3599999999999999999998 87 89999887
No 462
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=77.67 E-value=1.6 Score=40.66 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=29.3
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
.-|.|||+|..|...|+.|+.+ |. .|.|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-GIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCc
Confidence 4699999999999999999987 88 999999875
No 463
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=77.66 E-value=2 Score=40.38 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
..|.|||+|..|.++|..|+.. +. .|.++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 5699999999999999999987 77 899999864
No 464
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=77.52 E-value=2.1 Score=42.65 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-+|-|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999999998 99999999876
No 465
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=77.42 E-value=1.7 Score=39.14 Aligned_cols=32 Identities=9% Similarity=0.283 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC----eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL----KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~----~VlvlE~g~ 44 (512)
-+.|||.|..|...|..|+++ |. +|.+.++.+
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~-g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINK-NIVSSNQIICSDLNT 39 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TSSCGGGEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHhC-CCCCCCeEEEEeCCH
Confidence 389999999999999999998 98 999999865
No 466
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=77.40 E-value=2.3 Score=38.38 Aligned_cols=32 Identities=13% Similarity=0.241 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+.|||.|..|...|..|++. |.+|.+.++.+
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~-g~~v~~~~~~~ 36 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQT-PHELIISGSSL 36 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTS-SCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEECCCH
Confidence 489999999999999999988 89999999864
No 467
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=77.33 E-value=1.8 Score=44.38 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-.+||||.|-.|..+|..|.+. |.+|+++|+.+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChH
Confidence 4699999999999999999998 999999999875
No 468
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=77.31 E-value=2 Score=40.80 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|.|||.|..|.+.|..|++. |.+|++.++.+
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~-G~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDS-GVDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHC-cCEEEEEECCh
Confidence 389999999999999999998 99999998864
No 469
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=77.31 E-value=2 Score=38.38 Aligned_cols=31 Identities=32% Similarity=0.474 Sum_probs=28.2
Q ss_pred EEEECC-ChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGs-G~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
++|.|+ |..|..+|.+|+++ |.+|.++.|..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARA-GHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCh
Confidence 788887 99999999999998 99999999865
No 470
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=77.18 E-value=2.1 Score=37.66 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=29.4
Q ss_pred cEEEECC-ChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGs-G~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|+|.|+ |..|..++.+|.++ |.+|.++.|.+
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNR-GFEVTAVVRHP 38 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCG
T ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCc
Confidence 3999995 99999999999998 99999999975
No 471
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=76.80 E-value=1.7 Score=42.78 Aligned_cols=35 Identities=20% Similarity=0.472 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcCC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGGD 45 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~~ 45 (512)
...|+|||+|..|+.+|..|+.. |. ++.|+|....
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~a-Gvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALS-GFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHT-TCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEcCCEe
Confidence 45699999999999999999998 87 7999997653
No 472
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=76.76 E-value=2.1 Score=37.53 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=28.2
Q ss_pred EEEEC-CChhHHHHHHHHh-CCCCCeEEEEcCcC
Q psy1059 13 IIIVG-ASAAGCVLANRLS-EVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVG-sG~aG~~~A~~La-~~~g~~VlvlE~g~ 44 (512)
++|.| +|..|..+|.+|+ ++ |.+|.++.|.+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYT-DMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCc
Confidence 89999 5999999999999 77 99999999864
No 473
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=76.66 E-value=2.2 Score=37.94 Aligned_cols=32 Identities=19% Similarity=0.359 Sum_probs=29.0
Q ss_pred cEEEEC-CChhHHHHHHHHhCCCC-CeEEEEcCcC
Q psy1059 12 DIIIVG-ASAAGCVLANRLSEVSS-LKVLLIEAGG 44 (512)
Q Consensus 12 DviVVG-sG~aG~~~A~~La~~~g-~~VlvlE~g~ 44 (512)
-|+|.| +|..|..+|.+|+++ | .+|.++.|.+
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~-G~~~V~~~~R~~ 58 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADK-QTIKQTLFARQP 58 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTC-TTEEEEEEESSG
T ss_pred EEEEEeCCcHHHHHHHHHHHhC-CCceEEEEEcCh
Confidence 489999 599999999999998 9 8999999875
No 474
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=76.60 E-value=1.9 Score=40.39 Aligned_cols=31 Identities=16% Similarity=0.487 Sum_probs=28.4
Q ss_pred EEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
|.|||+|..|..+|..|+.+ +. .|.++|..+
T Consensus 3 v~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~~ 35 (314)
T 3nep_X 3 VTVIGAGNVGATVAECVARQ-DVAKEVVMVDIKD 35 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHH-TCSSEEEEECSST
T ss_pred EEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCch
Confidence 78999999999999999987 76 899999866
No 475
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=76.46 E-value=1.7 Score=39.60 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=29.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCe-EEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLK-VLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~-VlvlE~g~ 44 (512)
.|.|||+|..|...|..|++. |.+ |.+.++.+
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~~ 44 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRK-GFRIVQVYSRTE 44 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSH
T ss_pred eEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCCH
Confidence 599999999999999999998 998 89998864
No 476
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=76.11 E-value=2.6 Score=38.52 Aligned_cols=31 Identities=13% Similarity=0.081 Sum_probs=28.0
Q ss_pred EEEECC---ChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGA---SAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGs---G~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
++|.|+ |..|..+|.+|+++ |.+|+++.|..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 899997 68999999999998 99999998865
No 477
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=76.10 E-value=2.2 Score=39.30 Aligned_cols=33 Identities=18% Similarity=0.331 Sum_probs=28.8
Q ss_pred cccEEEECC-ChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 10 CFDIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 10 ~~DviVVGs-G~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
...++|||. |+.|-.+|..|.+. |..|+++.+.
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~-gAtVtv~~~~ 198 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKE-NATVTIVHSG 198 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHT-TCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHC-CCeEEEEeCC
Confidence 357999995 56999999999998 9999999874
No 478
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=76.09 E-value=2 Score=42.88 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-.|.|||.|..|...|..|+++ |.+|.+.++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-GYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 4699999999999999999998 99999999864
No 479
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=76.02 E-value=2.1 Score=39.19 Aligned_cols=33 Identities=9% Similarity=0.194 Sum_probs=29.4
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC-eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL-KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~-~VlvlE~g~ 44 (512)
-.++|||+|.+|..+|+.|++. |. +|.|+.|..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~-G~~~i~v~nRt~ 153 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS-GFEKLKIYARNV 153 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT-TCCCEEEECSCH
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 3599999999999999999998 86 799998864
No 480
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=75.92 E-value=2.1 Score=40.25 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=29.5
Q ss_pred cccEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 10 CFDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 10 ~~DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
.--|.|||+|..|.++|+.|+.. |. .|.++|...
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~~ 44 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 34599999999999999999987 77 899999843
No 481
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=75.91 E-value=2.1 Score=41.76 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
--++|||.|..|..+|..|... |.+|++.|+.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 3599999999999999999887 99999999864
No 482
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=75.79 E-value=2 Score=42.94 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=29.5
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|+|||.|..|..+|..|... |.+|++.|+.+
T Consensus 276 tV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~ 307 (494)
T 3ce6_A 276 KVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDP 307 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 599999999999999999887 99999999865
No 483
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=75.72 E-value=2.4 Score=40.33 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=29.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCc
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g 43 (512)
--|+|+|.|..|..+|..|.+. |.+|++.|..
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~-GakVvvsD~~ 207 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA-GAQLLVADTD 207 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 4599999999999999999998 9999999864
No 484
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=77.57 E-value=0.56 Score=40.86 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=29.2
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.+.|||+|..|...|..|++. |.+|.++++.+
T Consensus 21 ~I~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 52 (201)
T 2yjz_A 21 VVCIFGTGDFGKSLGLKMLQC-GYSVVFGSRNP 52 (201)
Confidence 488999999999999999998 99999998865
No 485
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=75.58 E-value=2.3 Score=42.15 Aligned_cols=32 Identities=13% Similarity=0.177 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|+|+|+|..|..+|..|++. |.+|.+++|..
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~-G~~V~v~~R~~ 36 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDS-GIKVTVACRTL 36 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTT-TCEEEEEESSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-cCEEEEEECCH
Confidence 389999999999999999987 99999998864
No 486
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=75.49 E-value=2.4 Score=40.55 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=29.0
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
|+|||||..|..+|+.+.+. |++|+++|..+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKA-GMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 89999999999999988887 999999998664
No 487
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=75.44 E-value=2.6 Score=39.88 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
--+.|||.|..|..+|..|+.. |.+|++.++..
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~~~ 183 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGF-NMRILYYSRTR 183 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCEEEEECCCc
Confidence 3599999999999999999987 99999999865
No 488
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=75.44 E-value=2.6 Score=38.74 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=27.6
Q ss_pred EEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 13 viVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
|.|||.|..|...|..|++ |.+|.++++.+
T Consensus 4 i~iiG~G~~G~~~a~~l~~--g~~V~~~~~~~ 33 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLAR--RFPTLVWNRTF 33 (289)
T ss_dssp EEEECCSTTHHHHHHHHHT--TSCEEEECSST
T ss_pred EEEEcccHHHHHHHHHHhC--CCeEEEEeCCH
Confidence 8999999999999999996 89999999865
No 489
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=75.38 E-value=1.9 Score=43.89 Aligned_cols=54 Identities=17% Similarity=0.211 Sum_probs=39.2
Q ss_pred hhhhcccCCCCCEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchh
Q psy1059 215 AYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIA 275 (512)
Q Consensus 215 ~~l~~~~~~~~g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~ 275 (512)
.+|...+ .+.|++++.+ +|++|..++++.+++|.+.+ |+ +++++ .||.|.|...
T Consensus 169 ~~L~~~a-~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~--g~--~i~ad-~vV~A~G~~s 222 (538)
T 2aqj_A 169 DFLKRWA-VERGVNRVVD-EVVDVRLNNRGYISNLLTKE--GR--TLEAD-LFIDCSGMRG 222 (538)
T ss_dssp HHHHHHH-HHTTCEEEEC-CEEEEEECTTSCEEEEEETT--SC--EECCS-EEEECCGGGC
T ss_pred HHHHHHH-HHCCCEEEEe-eEeEEEEcCCCcEEEEEECC--Cc--EEEeC-EEEECCCCch
Confidence 3444444 4579999999 89999886356667776644 64 68998 7999999753
No 490
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=75.32 E-value=1.8 Score=43.24 Aligned_cols=50 Identities=18% Similarity=0.138 Sum_probs=35.6
Q ss_pred CEEEEcCcEEEEEEecCCCeEEEEEEEe-cCCeEEEEecCcEEEEcCCchhcHHHH
Q psy1059 226 NLYVLKRSKVTKVIINDQNVATGVEYVN-SKGETVRVTANKEVILTAGAIANAQLL 280 (512)
Q Consensus 226 g~~v~~~~~V~~i~~~~~~~v~GV~~~~-~~g~~~~v~A~k~VVlaaGa~~t~~lL 280 (512)
+.+|+++++|++|..+ +++ ..|++.+ .+|+ +++|+ .||+|++.....+|+
T Consensus 249 g~~i~~~~~V~~i~~~-~~~-~~v~~~~~~~g~--~~~ad-~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 249 GDAAHVGARVEGLARE-DGG-WRLIIEEHGRRA--ELSVA-QVVLAAPAHATAKLL 299 (478)
T ss_dssp GGGEESSEEEEEEECC---C-CEEEEEETTEEE--EEECS-EEEECSCHHHHHHHH
T ss_pred hhhEEcCCEEEEEEec-CCe-EEEEEeecCCCc--eEEcC-EEEECCCHHHHHHHh
Confidence 5689999999999987 554 4565532 1243 68998 699999987666665
No 491
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=75.26 E-value=1.7 Score=40.66 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=27.8
Q ss_pred cEEEECCChhHHHHHHHHhCCC----C-CeEEEEcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVS----S-LKVLLIEA 42 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~----g-~~VlvlE~ 42 (512)
.|.|||+|..|...|..|++++ | .+|.+++|
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5999999999999999999741 7 89999998
No 492
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=75.26 E-value=1.5 Score=43.65 Aligned_cols=41 Identities=15% Similarity=0.108 Sum_probs=31.8
Q ss_pred CEEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCc
Q psy1059 226 NLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGA 273 (512)
Q Consensus 226 g~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa 273 (512)
+.+|+++++|++|..+ +++++ |.+. +|+ +++|+ .||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~-~~~v~-v~~~--~g~--~~~ad-~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYS-PGGVT-VKTE--DNS--VYSAD-YVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEEC-SSCEE-EEET--TSC--EEEES-EEEECSCH
T ss_pred ccEEEcCCEEEEEEEc-CCcEE-EEEC--CCC--EEEcC-EEEEecCH
Confidence 6789999999999988 66554 4443 465 68898 69999984
No 493
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=75.14 E-value=2.4 Score=38.90 Aligned_cols=32 Identities=9% Similarity=0.150 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCC---eEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSL---KVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~---~VlvlE~g~ 44 (512)
-+.|||+|..|...|..|+++ |. +|.+.++.+
T Consensus 5 ~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 5 NITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSL 39 (280)
T ss_dssp CEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSS
T ss_pred EEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCH
Confidence 489999999999999999998 88 899999875
No 494
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=75.13 E-value=2.5 Score=39.66 Aligned_cols=33 Identities=21% Similarity=0.440 Sum_probs=28.7
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC--eEEEEcCcC
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL--KVLLIEAGG 44 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~--~VlvlE~g~ 44 (512)
.-|.|||+|..|.++|..|+.+ +. +|.++|...
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-GIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCCEEEEEeCCc
Confidence 3599999999999999999886 65 899999864
No 495
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=74.88 E-value=2.2 Score=42.39 Aligned_cols=33 Identities=9% Similarity=0.198 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
-|+|+|+|..|..+|..|++.++.+|.++.|..
T Consensus 25 ~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~ 57 (467)
T 2axq_A 25 NVLLLGSGFVAQPVIDTLAANDDINVTVACRTL 57 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHTSTTEEEEEEESSH
T ss_pred EEEEECChHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 499999999999999999987578999998864
No 496
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=74.88 E-value=2.5 Score=39.36 Aligned_cols=33 Identities=24% Similarity=0.256 Sum_probs=30.3
Q ss_pred cEEEECC-ChhHHHHHHHHhCCCCCeEEEEcCcCC
Q psy1059 12 DIIIVGA-SAAGCVLANRLSEVSSLKVLLIEAGGD 45 (512)
Q Consensus 12 DviVVGs-G~aG~~~A~~La~~~g~~VlvlE~g~~ 45 (512)
-|+|.|+ |..|..++.+|.++ |.+|.++.|...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVAS-GEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHC-CCEEEEEecCCc
Confidence 4999998 99999999999998 999999999764
No 497
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=74.85 E-value=1.9 Score=42.29 Aligned_cols=30 Identities=30% Similarity=0.482 Sum_probs=27.8
Q ss_pred ccEEEECCChhHHHHHHHHhCCCCC---eEEEEc
Q psy1059 11 FDIIIVGASAAGCVLANRLSEVSSL---KVLLIE 41 (512)
Q Consensus 11 ~DviVVGsG~aG~~~A~~La~~~g~---~VlvlE 41 (512)
--++|+|+|.+|..+|..|.+. |. +|.|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~-G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEA-GVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHc-CCCcCeEEEEE
Confidence 4699999999999999999998 87 899999
No 498
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=74.45 E-value=2.4 Score=42.46 Aligned_cols=49 Identities=18% Similarity=0.146 Sum_probs=34.9
Q ss_pred CCCC-EEEEcCcEEEEEEecCCCeEEEEEEEecCCeEEEEecCcEEEEcCCchhcHH
Q psy1059 223 KRTN-LYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQ 278 (512)
Q Consensus 223 ~~~g-~~v~~~~~V~~i~~~~~~~v~GV~~~~~~g~~~~v~A~k~VVlaaGa~~t~~ 278 (512)
.+.| ++|+++++|++|..+ ++.+ .+...+|+ +++++ .||+|+|.....+
T Consensus 266 ~~~g~~~i~~~~~V~~i~~~-~~~v---~v~~~~g~--~~~ad-~vI~a~~~~~l~~ 315 (495)
T 2vvm_A 266 AGTGRLGYVFGCPVRSVVNE-RDAA---RVTARDGR--EFVAK-RVVCTIPLNVLST 315 (495)
T ss_dssp HTTTCEEEESSCCEEEEEEC-SSSE---EEEETTCC--EEEEE-EEEECCCGGGGGG
T ss_pred hhcCceEEEeCCEEEEEEEc-CCEE---EEEECCCC--EEEcC-EEEECCCHHHHhh
Confidence 3456 999999999999987 5543 33332464 58898 6999999654443
No 499
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=74.29 E-value=2 Score=42.83 Aligned_cols=33 Identities=15% Similarity=0.355 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHhCC-CCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~-~g~~VlvlE~g~ 44 (512)
.|.|||.|..|+..|..|+++ +|.+|+++++.+
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 499999999999999999986 268999999865
No 500
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=74.02 E-value=1.8 Score=39.92 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=28.1
Q ss_pred cEEEECCChhHHHHHHHHhCCCCCeEEEEcCcC
Q psy1059 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44 (512)
Q Consensus 12 DviVVGsG~aG~~~A~~La~~~g~~VlvlE~g~ 44 (512)
.|.|||.|..|...|..|++. |.+|.+++ .+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~-~~ 35 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARA-GHQLHVTT-IG 35 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHT-TCEEEECC-SS
T ss_pred EEEEEccCHHHHHHHHHHHhC-CCEEEEEc-CH
Confidence 489999999999999999998 99999988 44
Done!