RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1059
(512 letters)
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 183 bits (464), Expect = 2e-53
Identities = 86/323 (26%), Positives = 136/323 (42%), Gaps = 24/323 (7%)
Query: 3 PYVKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG---DTPIHSRIPGMSSVL 59
P +G +D II G G +A +L+E +KVL+IE G + P +
Sbjct: 17 PSKVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQI 76
Query: 60 SLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK-L 118
+ D YL P + N I AGKGLGGS+ + + R +++ K
Sbjct: 77 FGTTVDQNYLTVP------LINNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVF 130
Query: 119 GYNGWGYDETLKYFVKSEDYRSV-------IYNESKAVHGTQGYLPVGLFKN-KENNIIR 170
G GW +D +Y K+E R+ ++ + HGT G + G N + + I
Sbjct: 131 GMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIM 190
Query: 171 EIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVL 230
+ + LG P +D + + + +R AA A+L P +R+NL +L
Sbjct: 191 KALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPN-YQRSNLEIL 249
Query: 231 KRSKVTKVIINDQ---NVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGP 287
V KV+ A GV + +K V A EV+L AG+ + +L SGIG
Sbjct: 250 TGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGL 309
Query: 288 KAHLDEVKIPVKQDLR--VGENL 308
K+ LD+ + DL + +
Sbjct: 310 KSVLDQANVTQLLDLPVGICSMM 332
Score = 54.1 bits (129), Expect = 2e-08
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 445 PVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLV 504
PVG M + + VV KV G +GLRV D S+ P + + I Y + K AD +
Sbjct: 325 PVGICSMM-SRELGGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAI 383
Query: 505 KTSY 508
Y
Sbjct: 384 LDDY 387
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 181 bits (460), Expect = 7e-53
Identities = 92/363 (25%), Positives = 140/363 (38%), Gaps = 27/363 (7%)
Query: 3 PYVKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHS---RIPGMSSVL 59
P SG D II G G A RL+E ++ VL+IE+G +
Sbjct: 10 PKDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDI 69
Query: 60 SLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKL- 118
S DHAY L N I +G GLGGS+ V + R +++ +
Sbjct: 70 FGSSVDHAYETVE-----LATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVF 124
Query: 119 GYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVG--------LFKNKENNIIR 170
G GW +D Y +++E R+ + A H + + I
Sbjct: 125 GNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYSPIV 184
Query: 171 EIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVL 230
+ ++ ++ G P KD + +R AA +L P +R NL VL
Sbjct: 185 KALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNY-QRPNLQVL 243
Query: 231 KRSKVTKVIINDQN---VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGP 287
V KV+++ A GVE+ KG T V A EV+L AG+ + +L SGIG
Sbjct: 244 TGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGM 303
Query: 288 KAHLDEVKIPVKQDLRVGENLKLNAQFTGPVMAFSAPLKRTVYSQEMVFKYLVNRIGPLS 347
K+ L+ + I DL VG + + G V VY + + + + I P
Sbjct: 304 KSILEPLGIDTVVDLPVGLCSMMPKEMGGVVDNA-----ARVYGVQGL-RVIDGSIPPTQ 357
Query: 348 NAG 350
+
Sbjct: 358 MSS 360
Score = 61.4 bits (148), Expect = 8e-11
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 11/105 (10%)
Query: 407 LAGGTLMS---LNLEACSQYPWRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDPNAVVTP 463
LA G+ +S L + L PVG M + VV
Sbjct: 285 LAAGSAVSPTILEYSGIGMKSILEPLGIDT-VVDL------PVGLCSMMP-KEMGGVVDN 336
Query: 464 DLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLVKTSY 508
+V G++GLRV D S+ P + + + Y + K +D + Y
Sbjct: 337 AARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDY 381
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 141 bits (357), Expect = 2e-38
Identities = 69/301 (22%), Positives = 109/301 (36%), Gaps = 35/301 (11%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 70
+D +IVG +GC LA LSE KVL++E G + + + + +
Sbjct: 27 YDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKT 84
Query: 71 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLK 130
+F I G+ LGG+S + +Y R + Y W D +
Sbjct: 85 PVERFVS----EDGIDNVRGRVLGGTSIINAGVYARANTSIYSASG----VDWDMDLVNQ 136
Query: 131 YFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMND 190
+ ED + + + + +T+ E G +
Sbjct: 137 TYEWVEDT---------------------IVYKPNSQSWQSVTKTAFLEAGVHPNHGFSL 175
Query: 191 RYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVATGVE 250
+ + G R AAD L + V + ATGV
Sbjct: 176 DHEEGTRITGSTFDNKGTR-HAADELLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVI 234
Query: 251 YVNSKGETVRVT--ANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKIPVKQDLR-VGEN 307
Y +S G + + EVI++AG I QLLLLSG+GP+++L + IPV VG+
Sbjct: 235 YRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQC 294
Query: 308 L 308
L
Sbjct: 295 L 295
Score = 28.3 bits (62), Expect = 2.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 460 VVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIG 497
V+ D +V GI LRV D S P + M+G
Sbjct: 299 VLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLG 336
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 135 bits (340), Expect = 7e-36
Identities = 40/307 (13%), Positives = 81/307 (26%), Gaps = 27/307 (8%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 70
+D++IVG+ GC A L + KV + + G + + + ++
Sbjct: 5 YDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVN 63
Query: 71 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAK----------LGY 120
L + + L +S + + R S ++ + +G
Sbjct: 64 VIQ--GQLMSVSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGG 121
Query: 121 NGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFK-NKENNIIREIFETSAQE 179
+ F + + K + F+ S +
Sbjct: 122 MSTHWTCATPRFDREQRPL----LVKDDADADDAEWDRLYTKAESYFQTGTDQFKESIRH 177
Query: 180 LGYPCPKDMN---DRYVDVGFAELPGMTRYGLRFSAADAYLTPI-----AGKRTNLYVLK 231
R + + +S+A+ +
Sbjct: 178 NLVLNKLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFP 237
Query: 232 RSKVTKVIINDQN-VATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAH 290
+V+ N N + + +LTAGA+ N QLL+ SG G
Sbjct: 238 AVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGR 297
Query: 291 LDEVKIP 297
+ P
Sbjct: 298 PNPTNPP 304
Score = 53.1 bits (126), Expect = 4e-08
Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Query: 425 WRSTHSWTCYIRHLTTTTSNPVGTVMMGNADDP-NAVVTPDLKVKGIKGLRVADISVLPN 483
+G+ MG + N V D +V G K L + +P
Sbjct: 289 NSGFGQLGRPNPTNPPELLPSLGSHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPT 348
Query: 484 AIITQSDAISYMIGEKCADLVKTSY 508
A + + K + +K ++
Sbjct: 349 AYGANPTLTAMSLAIKSCEYIKQNF 373
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 132 bits (332), Expect = 6e-35
Identities = 68/333 (20%), Positives = 111/333 (33%), Gaps = 25/333 (7%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD---TPIHSRIPGMSSVLSLSEFDHA 67
+D IIVGA G + A+RLSE + KVLL+E GG + + ++ L++FD
Sbjct: 3 YDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIP 61
Query: 68 YLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDE 127
L E + L G N + +F+ +
Sbjct: 62 GLFESLFTDSNPFWWCKDITVFAGCLVGGGTSVN--GALYWYPNDGDFSSSVGWPSSWTN 119
Query: 128 TLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKD 187
Y K + T G + N++ ++ + Q D
Sbjct: 120 HAPYTSKLSSRLPSTDH-----PSTDGQRY----LEQSFNVVSQLLKG--QGYNQATIND 168
Query: 188 MNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRSKVTKVIINDQNVAT 247
+ V + + A A R N V+ V+ + +
Sbjct: 169 NPNYKDHVFGY--SAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVR-NGSQIL 225
Query: 248 GVEYVNS---KGETVRVTANKEVILTAGAIANAQLLLLSGIGPKAHLDEVKI-PVKQDLR 303
GV+ + + VT VIL+AGA +++L SGIGP + V+ P
Sbjct: 226 GVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAAL 285
Query: 304 VGENLKLNAQFTGPVMAFSAPLKRTVYSQEMVF 336
+N +N + S+P V S VF
Sbjct: 286 PPQNQWINLPVGMTTIG-SSPQSAVVDSNVKVF 317
Score = 51.2 bits (121), Expect = 1e-07
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 445 PVGTVMMGNADDPNAVVTPDLKVKGIKGLRVADISVLPNAIITQSDAISYMIGEKCADLV 504
PVG +G+ +AVV ++KV G L + D ++P+ E+ A +
Sbjct: 295 PVGMTTIGS-SPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKI 353
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 121 bits (304), Expect = 5e-31
Identities = 45/301 (14%), Positives = 92/301 (30%), Gaps = 27/301 (8%)
Query: 5 VKSGDCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIP----------- 53
+ GD +++G+ G V A RL++ + + ++E G
Sbjct: 2 LADGDRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDK 60
Query: 54 --------GMSSVLSLSEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQ 105
V + F + R + IK+ G+G+GG S V +
Sbjct: 61 RSMWLADKTDQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAV 120
Query: 106 RGTSYDYENFAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNKE 165
+E + Y++ ++ ++ + K +
Sbjct: 121 TPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAWFESTEWYK--FARTGRKTAQ 178
Query: 166 NNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRT 225
+ F + + Y + + G + S YL A
Sbjct: 179 RSGFTTAFVPNVYDFEYMKK-EAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQ-AAATG 236
Query: 226 NLYVLKRSKVTKVII-NDQNVATGVEYVNSKGETV--RVTANKEVILTAGAIANAQLLLL 282
L + +VTKV + +E ++ +G V +V V AG++ ++LL+
Sbjct: 237 KLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVS 296
Query: 283 S 283
Sbjct: 297 M 297
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 115 bits (289), Expect = 5e-29
Identities = 47/297 (15%), Positives = 101/297 (34%), Gaps = 30/297 (10%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD----TPIHSRIPGMSSVLSLSEFDHA 67
+++G V A RL E + ++ L++E G P + GM + S +
Sbjct: 4 PAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKN 62
Query: 68 YLAEPSQFAGL----------------GVRNARIKITAGKGLGGSSAVQNILYQRGTSYD 111
P V ++ + G+G+GG S V +
Sbjct: 63 RTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSY 122
Query: 112 YENFAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAVHGTQGYLPVGLFKNK-ENNIIR 170
+E + +YF ++ V + ++K T+ Y + + + +
Sbjct: 123 FEEI---LPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDTEWYKFARVSREQAGKAGLG 179
Query: 171 EIFETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVL 230
+F + + GY ++ A + S YL A + +
Sbjct: 180 TVFVPNVYDFGYM-QREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAA-ALGTGKVTIQ 237
Query: 231 KRSKVTKVII-NDQNVATGVEYVNSKGETV--RVTANKEVILTAGAIANAQLLLLSG 284
+V + D A VE ++ G+ + + + + + L AG++ + +LL+ +
Sbjct: 238 TLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 294
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 46.4 bits (108), Expect = 4e-06
Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 7/128 (5%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 70
+D+I++G C+L+ +S + KVL ++ + G SS ++ E +
Sbjct: 7 YDVIVLGTGLTECILSGIMSV-NGKKVLHMDR------NPYYGGESSSITPLEELYKRFQ 59
Query: 71 EPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWGYDETLK 130
R + ++ + Y +F + + +
Sbjct: 60 LLEGPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIY 119
Query: 131 YFVKSEDY 138
+E
Sbjct: 120 KVPSTETE 127
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 297
Score = 45.6 bits (106), Expect = 7e-06
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDH 66
+D+I++G C+L+ LS KVL I+ G ++ ++LS+
Sbjct: 6 YDVIVLGTGITECILSGLLSV-DGKKVLHIDK------QDHYGGEAASVTLSQLYE 54
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 42.0 bits (97), Expect = 8e-05
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPG 54
+D+I++G +G + A +E VLL++ G I G
Sbjct: 3 YDVIVIGGGPSGLMAAIGAAE-EGANVLLLDKGNKLGRKLAISG 45
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 40.9 bits (95), Expect = 2e-04
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEA 42
+D IIVG+ G V AN L + + KVL+IE
Sbjct: 2 YDYIIVGSGLFGAVCANELKK-LNKKVLVIEK 32
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 40.4 bits (93), Expect = 3e-04
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPG 54
D+++VG+ AG A ++ S KV+LIE ++++
Sbjct: 17 VDVVVVGSGGAGFSAAISATD-SGAKVILIEKEPVIGGNAKLAA 59
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4
{Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 39.1 bits (90), Expect = 7e-04
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43
D+++VGA +AG A +S+ +++V +IE
Sbjct: 34 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQS 66
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 288
Score = 39.3 bits (90), Expect = 7e-04
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSR 51
DI+I GA G A L + KV L+E+ +
Sbjct: 2 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGV 42
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 38.7 bits (89), Expect = 0.001
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGM 55
+ II+GA AAG A +L++ V + + G + G
Sbjct: 5 SENIIIGAGAAGLFCAAQLAK-LGKSVTVFDNGKKIGRKILMSGG 48
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 38.8 bits (89), Expect = 0.001
Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGM 55
D++I+G+ AG A + + KV+L+E ++++
Sbjct: 24 TDVVIIGSGGAGLAAAVSARD-AGAKVILLEKEPIPGGNTKLAAG 67
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 38.9 bits (89), Expect = 0.001
Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAY 68
FD+I+VGA + G +L++ +K LL++A + G + ++ + +
Sbjct: 4 FDVIVVGAGSMGMAAGYQLAK-QGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGRE 60
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 38.8 bits (89), Expect = 0.001
Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLA 70
+++VGA +AG + + + V+L++ + +S I ++ A+
Sbjct: 20 TQVLVVGAGSAGFNASLAAKK-AGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGV 78
Query: 71 EPS 73
E
Sbjct: 79 EDK 81
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 380
Score = 38.3 bits (88), Expect = 0.002
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSS-----LKVLLIEAG 43
D++IVGA AG A RL ++++ L+V L+E
Sbjct: 33 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 70
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 37.8 bits (86), Expect = 0.002
Identities = 43/310 (13%), Positives = 86/310 (27%), Gaps = 32/310 (10%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA----GG------------DTPIHSRIPGM 55
++ +VG +G +A+ L +L+E+ GG + +S +
Sbjct: 2 NVAVVGGGISGLAVAHHLRS-RGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDRE 60
Query: 56 SSVLSL-SEFDHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYEN 114
+ +L + + + A + + + + G
Sbjct: 61 PATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLRVAG 120
Query: 115 FAKLGYNGWGYDETLKYFVKSEDYRSVIYNESKAV-HGTQGYLPVGLFKNKENNIIREIF 173
G DE+L F + AV G L ++ ++
Sbjct: 121 ELFSRRAPEGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKME 180
Query: 174 ETSAQELGYPCPKDMNDRYVDVGFAELPGMTRYGLRFSAADAYLTPIAGKRTNLYVLKRS 233
+ R + P ++ F L +
Sbjct: 181 REHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASLGDAAHVGA 240
Query: 234 KVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLL---------LLSG 284
+V + D + G ++ + V+L A A A A+LL L++G
Sbjct: 241 RVEGLAREDGGWRL---IIEEHGRRAELSVAQ-VVLAAPAHATAKLLRPLDDALAALVAG 296
Query: 285 IGPKAHLDEV 294
I HL+ V
Sbjct: 297 IYNLGHLERV 306
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 37.3 bits (85), Expect = 0.002
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEA---GGDTPIHSRIP 53
+D+I++G + G A R + + KV L+E GG +P
Sbjct: 2 YDLIVIGGGSGGMAAARRAAR-HNAKVALVEKSRLGGTCVNVGCVP 46
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 37.4 bits (85), Expect = 0.002
Identities = 7/33 (21%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43
++ +++G G +A L++ + L E+G
Sbjct: 5 YEAVVIGGGIIGSAIAYYLAK-ENKNTALFESG 36
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 37.2 bits (85), Expect = 0.003
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIP--GMSSVLS 60
D++I+G+ AAG LA RL++ +V+++ G T + G+++V
Sbjct: 8 CDVLIIGSGAAGLSLALRLAD--QHQVIVLSKGPVTEGSTFYAQGGIAAVFD 57
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 37.4 bits (85), Expect = 0.004
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 12 DIIIVGASAAGCVLANRLSEVSS----LKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHA 67
D++IVGA AG + A LSE LKV +I+ + + G+ +L +
Sbjct: 9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCR-TLESLKNL 67
Query: 68 YLAEPSQFAGLGVRNARIKITAGKG 92
LA+ + + G
Sbjct: 68 GLADKILSEANDMSTIALYNPDENG 92
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 37.0 bits (84), Expect = 0.004
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIP--GMSSVL 59
D +++G AG A + L +++ HS GM + L
Sbjct: 6 CDSLVIGGGLAGLRAAVATQQ-KGLSTIVLSLIPVKRSHSAAAQGGMQASL 55
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 36.9 bits (84), Expect = 0.005
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 11 FDIIIVGASAAGCVLANRLSEV---SSLKVLLIEAGGDTPIHSRIPGMS 56
DI+I+G +GC A + LKV L+E + G+S
Sbjct: 22 TDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLS 70
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 36.1 bits (82), Expect = 0.006
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG--GDTPIHSRIPGMSSVLSLSEFDHAY 68
+D I +G + G NR + K LIEA G T ++ + ++ A
Sbjct: 3 YDYIAIGGGSGGIASINRAAM-YGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAI 61
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 35.8 bits (81), Expect = 0.008
Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 8/153 (5%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG------GDTPIHSRIPGMSSVLSLSEF 64
FD+I++GA G V A + ++ LK LIE G +L +
Sbjct: 4 FDVIVIGAGPGGYVAAIKSAQ-LGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDS 62
Query: 65 DHAYLAEPSQFAGLGVRNARIKITAGKGLGGSSAVQNILYQRGTSYDYENFAKLGYNGWG 124
+ + F G+ + I + + L G + + + G G
Sbjct: 63 SYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNL-TGGVASLIKANGVTLFEGHG 121
Query: 125 YDETLKYFVKSEDYRSVIYNESKAVHGTQGYLP 157
K + S +++ V G P
Sbjct: 122 KLLAGKKVEVTAADGSSQVLDTENVILASGSKP 154
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 35.6 bits (81), Expect = 0.008
Identities = 7/33 (21%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43
+D +++G + G A R +E + ++E+
Sbjct: 4 YDYLVIGGGSGGLASARRAAE-LGARAAVVESH 35
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 36.1 bits (81), Expect = 0.008
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43
+I+VGA +G A RLSE +L++EA
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEAT 33
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 35.5 bits (80), Expect = 0.008
Identities = 11/59 (18%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYL 69
FD+II+G + G A ++ KV++++ TP+ + + +++ +
Sbjct: 4 FDLIIIGGGSGGLAAAKEAAK-FDKKVMVLDFVTPTPLGTNWGLGGTCVNVGCIPKKLM 61
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide
dehydrogenase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 233
Score = 35.6 bits (81), Expect = 0.009
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44
D++I+G AG V A + ++ +E G
Sbjct: 6 HDVVIIGGGPAGYVAAIKAAQ-LGFNTACVEKRG 38
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 35.9 bits (81), Expect = 0.010
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43
I+I+GA G LA+ L + +++ G
Sbjct: 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG 34
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 35.6 bits (81), Expect = 0.010
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIP--GMSSVLSLSEFDH 66
FD +++GA AG A ++S+ S L+ T H+ G++ L + D+
Sbjct: 8 FDAVVIGAGGAGMRAALQISQ-SGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDN 64
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase
{Escherichia coli [TaxId: 562]}
Length = 311
Score = 35.7 bits (81), Expect = 0.010
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDTPIHSRIP--GMSSVLS 60
D+ IVGA AG A ++ + K+ LI H+ G ++V
Sbjct: 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQ 58
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 34.9 bits (79), Expect = 0.013
Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGG 44
+D++++G G A ++ LKV ++E
Sbjct: 7 YDVVVLGGGPGGYSAAFAAAD-EGLKVAIVERYK 39
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate
hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 35.3 bits (80), Expect = 0.014
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPG 54
+ I+GA +G +L L + + + +++E + RI
Sbjct: 4 QVAIIGAGPSGLLLGQLLHK-AGIDNVILERQTPDYVLGRIRA 45
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 35.1 bits (79), Expect = 0.020
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA 42
D+++VG +G A L + S L V+++EA
Sbjct: 1 DVVVVGGGISGMAAAKLLHD-SGLNVVVLEA 30
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 34.8 bits (79), Expect = 0.021
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFD 65
I+IVGA +G V+ +L+E +V +I+ I G S SE +
Sbjct: 5 ILIVGAGFSGAVIGRQLAE-KGHQVHIIDQ------RDHIGGNSYDARDSETN 50
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 34.4 bits (78), Expect = 0.022
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG---GDTPIHSRIPGMSSVLSLSEFDHA 67
D+++VGA +G RL E V +IE G +R PG + E+ ++
Sbjct: 8 VDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYS 66
Query: 68 YLAEP 72
+ E
Sbjct: 67 FSEEV 71
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide
dehydrogenase {Garden pea (Pisum sativum) [TaxId:
3888]}
Length = 221
Score = 34.4 bits (78), Expect = 0.022
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 9 DCFDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAY 68
D D++I+G G V A + ++ K IE G G +L H Y
Sbjct: 2 DENDVVIIGGGPGGYVAAIKAAQ-LGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMY 60
Query: 69 LAEPSQFAGLGVRNARIKI 87
FA GV+ + ++I
Sbjct: 61 HEAKHSFANHGVKVSNVEI 79
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 34.2 bits (77), Expect = 0.023
Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43
++I+G G V A R ++ + +L+E
Sbjct: 6 TTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQ 37
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 33.6 bits (75), Expect = 0.039
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA 42
I +VG S +G A L + + + V + E
Sbjct: 6 RIAVVGGSISGLTAALMLRD-AGVDVDVYER 35
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 33.5 bits (76), Expect = 0.042
Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 8/71 (11%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDT-------PIHSRIPGMSSVLSLSE 63
+ ++IVGA +G A L++ ++V L+ D P PG +
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQ-KGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDP 61
Query: 64 FDHAYLAEPSQ 74
D A ++
Sbjct: 62 KDERVWAFHAR 72
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide
dehydrogenase {Bacillus stearothermophilus [TaxId:
1422]}
Length = 223
Score = 33.3 bits (75), Expect = 0.044
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43
+ ++VGA G V A R ++ KV ++E G
Sbjct: 4 TETLVVGAGPGGYVAAIRAAQ-LGQKVTIVEKG 35
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 33.6 bits (75), Expect = 0.060
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43
++IVGA AG A L+ + +V ++EA
Sbjct: 32 HVVIVGAGMAGLSAAYVLAG-AGHQVTVLEAS 62
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 449
Score = 32.6 bits (72), Expect = 0.10
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEA----GG 44
+II+G+ +G A +L + V L+EA GG
Sbjct: 7 KVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRVGG 42
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 32.2 bits (72), Expect = 0.10
Identities = 6/41 (14%), Positives = 17/41 (41%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSR 51
+D++++GA + G + + +V +I+
Sbjct: 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHY 44
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter
sp., py2 [TaxId: 35809]}
Length = 261
Score = 32.2 bits (72), Expect = 0.12
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGD 45
+D I +G AAG + L + L+++
Sbjct: 43 YDAIFIGGGAAGRFGSAYLRA-MGGRQLIVDRWPF 76
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 31.9 bits (71), Expect = 0.13
Identities = 8/41 (19%), Positives = 18/41 (43%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSR 51
FD++++GA + G A + + +V +I+
Sbjct: 4 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFF 44
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 31.3 bits (69), Expect = 0.28
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43
+ ++GA +G A +L L V + EA
Sbjct: 4 VAVIGAGVSGLAAAYKLKI-HGLNVTVFEAE 33
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 30.1 bits (66), Expect = 0.36
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 13 IIIVGASAAGCVLANRLSEV-SSLKVLLIEAG 43
+++VG G A + S++V LIE
Sbjct: 5 VVVVGGGTGGATAAKYIKLADPSIEVTLIEPN 36
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 30.8 bits (68), Expect = 0.38
Identities = 6/39 (15%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 12 DIIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHS 50
++++G+ G A L+ V ++ + S
Sbjct: 8 RVVVLGSGVIGLSSALILAR-KGYSVHILARDLPEDVSS 45
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 311
Score = 30.7 bits (68), Expect = 0.42
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 11 FDIIIVGASAAGCVLANRLSEVS-SLKVLLIEAG 43
D+IIVGA ++G A +++ LKV +IE+
Sbjct: 51 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 84
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 29.8 bits (65), Expect = 0.65
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Query: 13 IIIVGASAAGCVLANRLSEVSS-LKVLLIEAGGDTPIHSRIPGMSSVLSLSEFDHAYLAE 71
+I++G+S G L + ++ E G S + + + +
Sbjct: 3 VIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMT 62
Query: 72 PSQFAGLGVR 81
+ GV
Sbjct: 63 GEKMESRGVN 72
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide
dehydrogenase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 233
Score = 29.3 bits (64), Expect = 1.1
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 12 DIIIVGASAAGCVLANRLSEV--SSLKVLLIEA---GGDTPIHSRIP 53
I+I+G AG A + + +V +I+ GG + +P
Sbjct: 3 RIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVP 49
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 28.9 bits (63), Expect = 1.3
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 12 DIIIVGASAAGCVLANRLSEV-SSLKVLLIEAGGDTPIHSRIP 53
+++G A A + +VL++ + P + R P
Sbjct: 6 PFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP-YMRPP 47
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide
reductase subunit F (AhpF), C-terminal domains
{Escherichia coli [TaxId: 562]}
Length = 184
Score = 28.6 bits (62), Expect = 1.4
Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 11 FDIIIVGASAAGCVLANRLSEVSSLKVLLIE 41
+D++IVG+ AG A + ++ L+
Sbjct: 2 YDVLIVGSGPAGAAAAIYSAR-KGIRTGLMG 31
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 28.5 bits (62), Expect = 2.0
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 13 IIIVGASAAGCVLANRLS-EVSSLKVLLIEAG---GDTPIHSRIPG 54
I I+GA +G V A L E + +V L E G ++
Sbjct: 7 IAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLS 52
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite
reductase {Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 27.8 bits (60), Expect = 2.0
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSR 51
++IVG G LA +LS+ + +V +I+
Sbjct: 3 VVIVGNGPGGFELAKQLSQ--TYEVTVIDKEPVPYYSKP 39
>d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger
[TaxId: 5061]}
Length = 196
Score = 28.2 bits (62), Expect = 2.1
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 431 WTCYIRHLTTTTSNPVGT 448
WT YI + + VGT
Sbjct: 179 WTEYIPYHFRPNYHGVGT 196
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 28.3 bits (62), Expect = 2.2
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Query: 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGMSSVLS 60
++++GA G A + E VL P ++ ++
Sbjct: 3 VVVIGAGVIGLSTALCIHE-RYHSVLQPLD-VKVYADRFTPFTTTDVA 48
>d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 196
Score = 27.8 bits (61), Expect = 2.2
Identities = 3/18 (16%), Positives = 7/18 (38%)
Query: 431 WTCYIRHLTTTTSNPVGT 448
W+ Y+ + V +
Sbjct: 179 WSDYVLQNFRPNWHAVSS 196
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId:
9823]}
Length = 196
Score = 27.4 bits (59), Expect = 3.7
Identities = 8/43 (18%), Positives = 15/43 (34%)
Query: 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAGGDTPIHSRIPGM 55
I ++GA A A+ L+ + + + E S
Sbjct: 7 IALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIP 49
>d1kl9a1 a.60.14.1 (A:89-182) Eukaryotic initiation factor 2alpha,
eIF2alpha, domain 2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 25.9 bits (57), Expect = 3.9
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 24/75 (32%)
Query: 143 YNESKAVHGTQGYLPVGLFKNKENNIIREIFETSAQELGYPCPKDMNDRYVDVGFAELPG 202
+ +SK V+ +I+R + A+ L Y + + + +
Sbjct: 13 FTKSKTVY----------------SILRHV----AEVLEYTKDEQLESLFQRTAW---VF 49
Query: 203 MTRYGLRFSAA-DAY 216
+Y A DA+
Sbjct: 50 DDKYKRPGYGAYDAF 64
>d1tq5a1 b.82.1.12 (A:1-231) Hypothetical protein YhhW {Escherichia
coli [TaxId: 562]}
Length = 231
Score = 27.0 bits (59), Expect = 4.6
Identities = 16/122 (13%), Positives = 31/122 (25%), Gaps = 34/122 (27%)
Query: 183 PCPKDMNDRYVDVGFAELPGMTRYG--------------------LRFSAADAYLTPIAG 222
P + RY F + G + A
Sbjct: 121 PEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDMELYRWALLKDEQSVHQIAAE 180
Query: 223 KRTNLYVLKRSKVTKVIINDQNVATGVEYVNSKGETVRVTANKEVILTAGAIANAQLLLL 282
+R + V+K V IN +T + + + A+ ++++LL
Sbjct: 181 RRVWIQVVK----GNVTINGVKASTSDGLAIWDEQAISIHADS----------DSEVLLF 226
Query: 283 SG 284
Sbjct: 227 DL 228
>d1gwma_ b.18.1.19 (A:) Non-catalytic protein 1, Ncp1 {Piromyces
equi [TaxId: 99929]}
Length = 153
Score = 25.7 bits (56), Expect = 8.9
Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Query: 112 YENFAKL--GYNGWGYDETLKYF 132
++N + L GY+ WG+ TL Y+
Sbjct: 11 FKNASGLPNGYDNWGWGCTLSYY 33
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE
{Escherichia coli [TaxId: 562]}
Length = 167
Score = 26.0 bits (56), Expect = 8.9
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 13 IIIVGASAAGCVLANRLSE 31
I ++G A G + L +
Sbjct: 3 ITVLGCGALGQLWLTALCK 21
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 25.8 bits (55), Expect = 9.3
Identities = 6/31 (19%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 13 IIIVGASAAGCVLANRLSEVSSLKVLLIEAG 43
++++GA A L + + L+ G
Sbjct: 6 VVVLGAGLASVSFVAELRQAGY-QGLITVVG 35
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.392
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,826,933
Number of extensions: 83771
Number of successful extensions: 298
Number of sequences better than 10.0: 1
Number of HSP's gapped: 280
Number of HSP's successfully gapped: 77
Length of query: 512
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 423
Effective length of database: 1,185,626
Effective search space: 501519798
Effective search space used: 501519798
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)