BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10590
(344 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PBC|A Chain A, Fk506-Binding Protein 2
pdb|2PBC|B Chain B, Fk506-Binding Protein 2
pdb|2PBC|C Chain C, Fk506-Binding Protein 2
pdb|2PBC|D Chain D, Fk506-Binding Protein 2
Length = 102
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
Query: 173 KDKNGFISHDEFSG-----PKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKL 227
K + G + H ++G + D ++QPF F+LG GQVIKGWDQGL MC GEKRKL
Sbjct: 5 KSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKL 64
Query: 228 TIPPALAYGDRGAGNVIPGGATLTFEVELLSI 259
IP L YG+RGA IPGGATL FEVELL I
Sbjct: 65 VIPSELGYGERGAPPKIPGGATLVFEVELLKI 96
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 31/41 (75%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
MC GEKRKL IP L YG+RGA IPGGATL FEVELL I
Sbjct: 56 MCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI 96
>pdb|4GGQ|C Chain C, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|D Chain D, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
Length = 209
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 51/74 (68%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG RGAG VIP
Sbjct: 136 GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 195
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 196 PNATLVFEVELLDV 209
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 30/41 (73%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG RGAG VIP ATL FEVELL +
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 209
>pdb|3VAW|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation V3i From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 51/74 (68%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG RGAG VIP
Sbjct: 136 GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 195
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 196 PNATLVFEVELLDV 209
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 30/41 (73%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG RGAG VIP ATL FEVELL +
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 209
>pdb|3UQA|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation A54e From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 51/74 (68%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG RGAG VIP
Sbjct: 136 GQKFDSSKDRNDPFEFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 195
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 196 PNATLVFEVELLDV 209
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 30/41 (73%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG RGAG VIP ATL FEVELL +
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 209
>pdb|4DZ3|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation M61h From Burkholderia
Pseudomallei Complexed With Fk506
pdb|4DZ3|B Chain B, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation M61h From Burkholderia
Pseudomallei Complexed With Fk506
Length = 113
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 51/74 (68%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG RGAG VIP
Sbjct: 40 GQKFDSSKDRNDPFAFVLGGGHVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 99
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 100 PNATLVFEVELLDV 113
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 30/41 (73%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG RGAG VIP ATL FEVELL +
Sbjct: 73 MKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 113
>pdb|2KE0|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei
pdb|2KO7|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei Complexed With
Cycloheximide-N- Ethylethanoate
pdb|2L2S|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei Complexed With
1-{[(4-Methylphenyl) Thio]acetyl}piperidine
Length = 117
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 51/74 (68%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG RGAG VIP
Sbjct: 44 GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 103
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 104 PNATLVFEVELLDV 117
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 30/41 (73%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG RGAG VIP ATL FEVELL +
Sbjct: 77 MKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 117
>pdb|2Y78|A Chain A, Crystal Structure Of Bpss1823, A Mip-Like Chaperone From
Burkholderia Pseudomallei
Length = 133
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 51/74 (68%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG RGAG VIP
Sbjct: 60 GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 119
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 120 PNATLVFEVELLDV 133
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 30/41 (73%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG RGAG VIP ATL FEVELL +
Sbjct: 93 MKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133
>pdb|3UF8|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With A G95a Surface Mutation From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG RGA VIP
Sbjct: 136 GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIP 195
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 196 PNATLVFEVELLDV 209
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 29/41 (70%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG RGA VIP ATL FEVELL +
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209
>pdb|3UQB|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Fk506
pdb|4FN2|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj37
pdb|4FN2|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj37
pdb|4G50|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj168
pdb|4G50|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj168
pdb|4GIV|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj183
pdb|4GIV|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj183
Length = 209
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG RGAG VIP
Sbjct: 136 GQKFGSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 195
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 196 PNATLVFEVELLDV 209
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 30/41 (73%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG RGAG VIP ATL FEVELL +
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 209
>pdb|3JYM|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
pdb|3JYM|B Chain B, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
Length = 377
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 184 FSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV 243
G K D DRD F F LG GQVIKGWDQG+ M GE TIPP LAYG+ G+
Sbjct: 58 LDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPT 117
Query: 244 IPGGATLTFEVELL---SIGDQVTTTNVFKEIDSDADK 278
IP ATL F+VELL S+ D +FK+I + DK
Sbjct: 118 IPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDK 155
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 130/289 (44%), Gaps = 42/289 (14%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL---SIGDQVTTTNVFKEIDSD 57
M GE TIPP LAYG+ G+ IP ATL F+VELL S+ D +FK+I +
Sbjct: 93 MKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKE 152
Query: 58 ADKQLSREEVSE-YLKKQMVAAEG-----SEGAE-DVK--HMLEEHDKLVEEIFQHED-- 106
DK + ++ E ++K + +G SEG E VK H+ K V+ + + E
Sbjct: 153 GDKWENPKDPDEVFVKYEARLEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVL 212
Query: 107 ---KDKNGFISHDEFSGPKHDELGL--PNVFKEIDSDADKQLSREEVSE---YLKKQMVA 158
K + GF E P E G PN ID + + E+ + LKK +
Sbjct: 213 LAVKPQYGF---GEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKE 269
Query: 159 AEGSEVEEIFQHEDKDKNGFISHDEFSGPKHD------ELHDRDQPFTFTLGVGQVIKGW 212
EG E + G + + +G D + HD +PF F VI+G
Sbjct: 270 XEGYE---------RPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGL 320
Query: 213 DQGLTEMCVGEKRKLTIPPALAYGDRGAGN--VIPGGATLTFEVELLSI 259
D+ + M GE +TIPP AYG + ++P +T+ +EVEL+S
Sbjct: 321 DRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSF 369
>pdb|3JXV|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
Length = 356
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 184 FSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV 243
G K D DRD F F LG GQVIKGWDQG+ M GE TIPP LAYG+ G+
Sbjct: 42 LDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPT 101
Query: 244 IPGGATLTFEVELL---SIGDQVTTTNVFKEIDSDADK 278
IP ATL F+VELL S+ D +FK+I + DK
Sbjct: 102 IPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDK 139
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 130/289 (44%), Gaps = 42/289 (14%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL---SIGDQVTTTNVFKEIDSD 57
M GE TIPP LAYG+ G+ IP ATL F+VELL S+ D +FK+I +
Sbjct: 77 MKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKE 136
Query: 58 ADKQLSREEVSE-YLKKQMVAAEG-----SEGAE-DVK--HMLEEHDKLVEEIFQHED-- 106
DK + ++ E ++K + +G SEG E VK H+ K V+ + + E
Sbjct: 137 GDKWENPKDPDEVFVKYEARLEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVL 196
Query: 107 ---KDKNGFISHDEFSGPKHDELGL--PNVFKEIDSDADKQLSREEVSE---YLKKQMVA 158
K + GF E P E G PN ID + + E+ + LKK +
Sbjct: 197 LAVKPQYGF---GEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKE 253
Query: 159 AEGSEVEEIFQHEDKDKNGFISHDEFSGPKHD------ELHDRDQPFTFTLGVGQVIKGW 212
EG E + G + + +G D + HD +PF F VI+G
Sbjct: 254 XEGYE---------RPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGL 304
Query: 213 DQGLTEMCVGEKRKLTIPPALAYGDRGAGN--VIPGGATLTFEVELLSI 259
D+ + M GE +TIPP AYG + ++P +T+ +EVEL+S
Sbjct: 305 DRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSF 353
>pdb|2LGO|A Chain A, Solution Nmr Structure Of A Fkbp-Type Peptidyl-Prolyl
Cis-Trans Isomerase From Giardia Lamblia, Seattle
Structural Genomics Center For Infectious Disease Target
Gilaa.00840.A
Length = 130
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 51/74 (68%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G + D R +PF FTLG G+VIKGWDQG+ M +GEK TIP LAYG+RG VIP
Sbjct: 57 GKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPPVIP 116
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL++
Sbjct: 117 PKATLVFEVELLAV 130
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 29/41 (70%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M +GEK TIP LAYG+RG VIP ATL FEVELL++
Sbjct: 90 MTLGEKALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130
>pdb|4DIP|A Chain A, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|B Chain B, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|C Chain C, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|D Chain D, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|E Chain E, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|F Chain F, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|G Chain G, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|H Chain H, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|I Chain I, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|J Chain J, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
Length = 125
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 193 HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTF 252
H+ QP FTLG+ + +KGWDQGL MCVGEKRKL IPPAL YG G G IP +TL F
Sbjct: 56 HNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGKGK-IPPESTLIF 114
Query: 253 EVELLSI 259
++LL I
Sbjct: 115 NIDLLEI 121
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
MCVGEKRKL IPPAL YG G G IP +TL F ++LL I
Sbjct: 82 MCVGEKRKLIIPPALGYGKEGKGK-IPPESTLIFNIDLLEI 121
>pdb|1YAT|A Chain A, Improved Calcineurin Inhibition By Yeast Fkbp12-Drug
Complexes. Crystallographic And Functional Analysis
Length = 113
Score = 82.8 bits (203), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/75 (53%), Positives = 50/75 (66%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D DR PF +GVGQVIKGWD G+ ++ VGEK +LTIP AYG RG +I
Sbjct: 38 NGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLI 97
Query: 245 PGGATLTFEVELLSI 259
P +TL F+VELL +
Sbjct: 98 PPNSTLVFDVELLKV 112
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
+ VGEK +LTIP AYG RG +IP +TL F+VELL +
Sbjct: 72 LSVGEKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112
>pdb|3UQI|A Chain A, Crystallographic Structure Of Fkbp12 From Aedes Aegypti
pdb|2LPV|A Chain A, Solution Structure Of Fkbp12 From Aedes Aegypti
Length = 108
Score = 82.8 bits (203), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/74 (51%), Positives = 49/74 (66%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G D R +PF FT+G G+VI+GWD+G+ +M VG++ KL P AYG RG VIP
Sbjct: 34 GKVFDSSRTRGKPFRFTVGRGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIP 93
Query: 246 GGATLTFEVELLSI 259
ATLTF+VELL +
Sbjct: 94 PNATLTFDVELLRV 107
Score = 48.1 bits (113), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KL P AYG RG VIP ATLTF+VELL +
Sbjct: 67 MSVGQRAKLVCSPDYAYGSRGHPGVIPPNATLTFDVELLRV 107
>pdb|1FKK|A Chain A, Atomic Structure Of Fkbp12, An Immunophilin Binding
Protein
pdb|1FKL|A Chain A, Atomic Structure Of Fkbp12-Rapaymycin, An Immunophilin-
Immunosuppressant Complex
Length = 107
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+GW++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PNATLIFDVELLKL 106
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKL 106
>pdb|1FKB|A Chain A, Atomic Structure Of The Rapamycin Human Immunophilin Fkbp-
12 Complex
pdb|1FKG|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FKH|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FAP|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- Rapamycin Complex Interacting With Human Frap
pdb|1FKI|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FKI|B Chain B, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
Length = 107
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+GW++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|3H9R|B Chain B, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
pdb|3MDY|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 109
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+GW++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 35 GKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 94
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 95 PHATLVFDVELLKL 108
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 68 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 108
>pdb|2FAP|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- (C16)-Ethoxy Rapamycin Complex Interacting With
Huma
pdb|1B6C|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|E Chain E, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|G Chain G, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1QPF|A Chain A, Fk506 Binding Protein (12 Kda, Human) Complex With
L-709,858
pdb|1QPF|D Chain D, Fk506 Binding Protein (12 Kda, Human) Complex With
L-709,858
pdb|1QPL|A Chain A, Fk506 Binding Protein (12 Kda, Human) Complex With
L-707,587
pdb|1QPL|C Chain C, Fk506 Binding Protein (12 Kda, Human) Complex With
L-707,587
pdb|1D6O|A Chain A, Native Fkbp
pdb|1D6O|B Chain B, Native Fkbp
pdb|1D7H|A Chain A, Fkbp Complexed With Dmso
pdb|1D7H|B Chain B, Fkbp Complexed With Dmso
pdb|1D7I|A Chain A, Fkbp Complexed With Methyl Methylsulfinylmethyl Sulfide
(Dss)
pdb|1D7I|B Chain B, Fkbp Complexed With Methyl Methylsulfinylmethyl Sulfide
(Dss)
pdb|1D7J|A Chain A, Fkbp Complexed With 4-Hydroxy-2-Butanone
pdb|1D7J|B Chain B, Fkbp Complexed With 4-Hydroxy-2-Butanone
pdb|3FAP|A Chain A, Atomic Structures Of The Rapamycin Analogs In Complex With
Both Human Fkbp12 And Frb Domain Of Frap
pdb|4FAP|A Chain A, Atomic Structures Of The Rapamycin Analogs In Complex With
Both Human Fkbp12 And Frb Domain Of Frap
pdb|1J4R|A Chain A, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4R|B Chain B, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4R|D Chain D, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4H|A Chain A, Crystal Structure Analysis Of The Fkbp12 Complexed With
000107 Small Molecule
pdb|1J4I|A Chain A, Crystal Structure Analysis Of The Fkbp12 Complexed With
000308 Small Molecule
pdb|2DG3|A Chain A, Wildtype Fk506-Binding Protein Complexed With Rapamycin
pdb|1FKD|A Chain A, Fk-506 Binding Protein: Three-Dimensional Structure Of The
Complex With The Antagonist L-685,818
pdb|1FKF|A Chain A, Atomic Structure Of Fkbp-Fk506, An
Immunophilin-Immunosuppressant Complex
pdb|1FKJ|A Chain A, Atomic Structure Of Fkbp12-Fk506, An Immunophilin
Immunosuppressant Complex
pdb|2FKE|A Chain A, Fk-506-Binding Protein: Three-Dimensional Structure Of The
Complex With The Antagonist L-685,818
pdb|1F40|A Chain A, Solution Structure Of Fkbp12 Complexed With Gpi-1046, A
Neurotrophic Ligand
pdb|1FKR|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|1FKS|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|1FKT|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|2PPN|A Chain A, Crystal Structure Of Fkbp12
pdb|1A7X|A Chain A, Fkbp12-Fk1012 Complex
pdb|1A7X|B Chain B, Fkbp12-Fk1012 Complex
pdb|4DH0|A Chain A, X-Ray Crystal Structure Of 28-O-Methylrapamycin Complexed
With Fkbp12: Is The Cyclohexyl Moiety Part Of The
Effector Domain Of Rapamycin?
pdb|2RSE|A Chain A, Nmr Structure Of Fkbp12-Mtor Frb Domain-Rapamycin Complex
Structure Determined Based On Pcs
pdb|1NSG|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- Rapamycin Complex Interacting With Human Frap
Length = 107
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+GW++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|1TCO|C Chain C, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 107
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+GW++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|1EYM|A Chain A, Fk506 Binding Protein Mutant, Homodimeric Complex
pdb|1EYM|B Chain B, Fk506 Binding Protein Mutant, Homodimeric Complex
Length = 107
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+GW++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKMDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|1KT0|A Chain A, Structure Of The Large Fkbp-like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 45/73 (61%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D HDR++PF F+LG GQVIK WD G+ M GE L P AYG G+ I
Sbjct: 63 NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGSLPKI 122
Query: 245 PGGATLTFEVELL 257
P ATL FE+ELL
Sbjct: 123 PSNATLFFEIELL 135
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 21/39 (53%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
M GE L P AYG G+ IP ATL FE+ELL
Sbjct: 97 MKRGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELL 135
>pdb|2PPP|A Chain A, Crystal Structure Of E60q Mutant Of Fkbp12
Length = 107
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+GW +G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKFDSSRDRNKPFKFMLGKQEVIRGWQEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|1BKF|A Chain A, Fk506 Binding Protein Fkbp Mutant R42kH87V COMPLEX WITH
Immunosuppressant Fk506
Length = 107
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D D+++PF F LG +VI+GW++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKFDSSRDKNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGVPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGVPGIIPPHATLVFDVELLKL 106
>pdb|4DZ2|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation R92g From Burkholderia
Pseudomallei Complexed With Fk506
pdb|4DZ2|B Chain B, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation R92g From Burkholderia
Pseudomallei Complexed With Fk506
Length = 113
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG GAG VIP
Sbjct: 40 GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGAGGAGGVIP 99
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 100 PNATLVFEVELLDV 113
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 29/41 (70%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG GAG VIP ATL FEVELL +
Sbjct: 73 MKVGGVRRLTIPPQLGYGAGGAGGVIPPNATLVFEVELLDV 113
>pdb|1BL4|A Chain A, Fkbp Mutant F36v Complexed With Remodeled Synthetic Ligand
pdb|1BL4|B Chain B, Fkbp Mutant F36v Complexed With Remodeled Synthetic Ligand
Length = 107
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+GW++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKVDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|2PPO|A Chain A, Crystal Structure Of E60a Mutant Of Fkbp12
Length = 107
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+GW +G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKFDSSRDRNKPFKFMLGKQEVIRGWAEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|1KT1|A Chain A, Structure Of The Large Fkbp-Like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 45/73 (61%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D HDR++PF F++G GQVIK WD G+ M GE L P AYG G+ I
Sbjct: 63 NGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPKI 122
Query: 245 PGGATLTFEVELL 257
P ATL FEVELL
Sbjct: 123 PSNATLFFEVELL 135
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 20/36 (55%)
Query: 4 GEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
GE L P AYG G+ IP ATL FEVELL
Sbjct: 100 GEICHLLCKPEYAYGATGSLPKIPSNATLFFEVELL 135
>pdb|3O5E|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vi
pdb|3O5F|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vii
Length = 144
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 45/73 (61%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D HDR++PF F+LG GQVIK WD G+ M GE L P AYG G+ I
Sbjct: 67 NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKI 126
Query: 245 PGGATLTFEVELL 257
P ATL FE+ELL
Sbjct: 127 PSNATLFFEIELL 139
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 4 GEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
GE L P AYG G+ IP ATL FE+ELL
Sbjct: 104 GEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELL 139
>pdb|4DRH|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor At Low Ph
pdb|4DRH|D Chain D, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor At Low Ph
pdb|4DRI|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor
Length = 144
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 45/73 (61%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D HDR++PF F+LG GQVIK WD G+ M GE L P AYG G+ I
Sbjct: 67 NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKI 126
Query: 245 PGGATLTFEVELL 257
P ATL FE+ELL
Sbjct: 127 PSNATLFFEIELL 139
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 4 GEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
GE L P AYG G+ IP ATL FE+ELL
Sbjct: 104 GEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELL 139
>pdb|3O5D|A Chain A, Crystal Structure Of A Fragment Of Fkbp51 Comprising The
Fk1 And Fk2 Domains
pdb|3O5D|B Chain B, Crystal Structure Of A Fragment Of Fkbp51 Comprising The
Fk1 And Fk2 Domains
Length = 264
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 45/73 (61%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D HDR++PF F+LG GQVIK WD G+ M GE L P AYG G+ I
Sbjct: 67 NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKI 126
Query: 245 PGGATLTFEVELL 257
P ATL FE+ELL
Sbjct: 127 PSNATLFFEIELL 139
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 4 GEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
GE L P AYG G+ IP ATL FE+ELL
Sbjct: 104 GEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELL 139
>pdb|3O5G|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form I
pdb|3O5I|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Ii
pdb|3O5I|B Chain B, Fk1 Domain Of Fkbp51, Crystal Form Ii
pdb|3O5J|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Iii
pdb|3O5K|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|B Chain B, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|C Chain C, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|D Chain D, Fk1 Domain Of Fkbp51, Crystal Form Viii
Length = 128
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 45/73 (61%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D HDR++PF F+LG GQVIK WD G+ M GE L P AYG G+ I
Sbjct: 51 NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKI 110
Query: 245 PGGATLTFEVELL 257
P ATL FE+ELL
Sbjct: 111 PSNATLFFEIELL 123
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 4 GEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
GE L P AYG G+ IP ATL FE+ELL
Sbjct: 88 GEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELL 123
>pdb|3O5L|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I
pdb|3O5M|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Ii
pdb|3O5M|B Chain B, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Ii
pdb|3O5O|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iii
pdb|3O5P|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iv
pdb|3O5Q|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iv, In
Presence Of Dmso
pdb|3O5R|A Chain A, Complex Of Fk506 With The Fk1 Domain Mutant A19t Of Fkbp51
pdb|4DRQ|A Chain A, Exploration Of Pipecolate Sulfonamides As Binders Of The
Fk506-Binding Proteins 51 And 52: Complex Of Fkbp51 With
2-(3-((R)-1-((S)-1-(3,5-
Dichlorophenylsulfonyl)piperidine-2-Carbonyloxy)-3-(3,
4-Dimethoxy - Phenyl)propyl)phenoxy)acetic Acid
pdb|4DRK|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-(3,
3-Dimethyl-2-Oxopentanoyl)piperidin-2-Yl]carbonyl}oxy)
Propyl]phenoxy}acetic Acid
pdb|4DRK|B Chain B, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-(3,
3-Dimethyl-2-Oxopentanoyl)piperidin-2-Yl]carbonyl}oxy)
Propyl]phenoxy}acetic Acid
pdb|4DRM|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-{[(1s,2r)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidin-2-Yl]carbonyl}oxy)propyl]phenoxy}acetic
Acid
pdb|4DRN|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-{[(1s,2r)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidin-2-Yl]carbonyl}oxy)propyl]phenoxy}acetic
Acid
pdb|4DRO|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
(1r)-3-(3,4-Dimethoxyphenyl)-1- Phenylpropyl
(2s)-1-{[(1r,2s)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidine-2-Carboxylate
pdb|4DRP|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For The
Fk506-Binding Proteins 51 And 52: Complex Of Fkbp51 With
2-(3-((R)-3-(3,4-
Dimethoxyphenyl)-1-((S)-1-(2-((1r,
2s)-2-Ethyl-1-Hydroxy-Cyclohexyl)-
2-Oxoacetyl)piperidine-2-
Carbonyloxy)propyl)phenoxy)acetic Acid From
Cocrystallization
Length = 128
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 45/73 (61%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D HDR++PF F+LG GQVIK WD G+ M GE L P AYG G+ I
Sbjct: 51 NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKI 110
Query: 245 PGGATLTFEVELL 257
P ATL FE+ELL
Sbjct: 111 PSNATLFFEIELL 123
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 4 GEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
GE L P AYG G+ IP ATL FE+ELL
Sbjct: 88 GEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELL 123
>pdb|1U79|A Chain A, Crystal Structure Of Atfkbp13
pdb|1U79|B Chain B, Crystal Structure Of Atfkbp13
pdb|1U79|C Chain C, Crystal Structure Of Atfkbp13
pdb|1U79|D Chain D, Crystal Structure Of Atfkbp13
pdb|1U79|E Chain E, Crystal Structure Of Atfkbp13
pdb|1Y0O|A Chain A, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|B Chain B, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|C Chain C, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|D Chain D, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|E Chain E, Crystal Structure Of Reduced Atfkbp13
Length = 129
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 11/84 (13%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQ------GLTEMCVGEKRKLTIPPALAYGDR 238
+G D ++R +P TF +GVG+VIKGWDQ G+ M G KR L IPP LAYGDR
Sbjct: 43 NGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDR 102
Query: 239 GAG-----NVIPGGATLTFEVELL 257
GAG +IP + L F++E +
Sbjct: 103 GAGCKGGSCLIPPASVLLFDIEYI 126
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAG-----NVIPGGATLTFEVELL 39
M G KR L IPP LAYGDRGAG +IP + L F++E +
Sbjct: 83 MLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYI 126
>pdb|2DG4|A Chain A, Fk506-Binding Protein Mutant Wf59 Complexed With Rapamycin
Length = 107
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+G+++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKFDSSRDRNKPFKFMLGKQEVIRGFEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|2DG9|A Chain A, Fk506-Binding Protein Mutant Wl59 Complexed With Rapamycin
Length = 107
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+G ++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKFDSSRDRNKPFKFMLGKQEVIRGLEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|1R9H|A Chain A, Structural Genomics Of C.Elegans: Fkbp-Type Peptidylprolyl
Isomerase
Length = 135
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 43/73 (58%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D DR F+F LG G VIKGWD G+ M GE + TI YGD G+ I
Sbjct: 46 NGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKI 105
Query: 245 PGGATLTFEVELL 257
PGGATL FEVEL
Sbjct: 106 PGGATLIFEVELF 118
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 23/39 (58%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
M GE + TI YGD G+ IPGGATL FEVEL
Sbjct: 80 MTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELF 118
>pdb|1C9H|A Chain A, Crystal Structure Of Fkbp12.6 In Complex With Rapamycin
Length = 107
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D DR++PF F +G +VIKG+++G +M +G++ KLT P +AYG G VI
Sbjct: 32 NGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVI 91
Query: 245 PGGATLTFEVELLSI 259
P ATL F+VELL++
Sbjct: 92 PPNATLIFDVELLNL 106
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M +G++ KLT P +AYG G VIP ATL F+VELL++
Sbjct: 66 MSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNL 106
>pdb|2KI3|A Chain A, Structural And Biochemical Characterization Of Fk506
Binding Domain From Plasmodium Vivax
pdb|3IHZ|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3IHZ|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3NI6|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3NI6|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3PA7|A Chain A, Crystal Structure Of Fkbp From Plasmodium Vivax In Complex
With Tetrapeptide Alpf
pdb|3PA7|B Chain B, Crystal Structure Of Fkbp From Plasmodium Vivax In Complex
With Tetrapeptide Alpf
Length = 126
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 178 FISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGD 237
++ E SG D +R+ PF F LG G+VIKGWD + M EK + + YG+
Sbjct: 43 YVGKLESSGKVFDSSRERNVPFKFHLGQGEVIKGWDICVASMTKNEKCSVRLDSKYGYGE 102
Query: 238 RGAGNVIPGGATLTFEVELLSI 259
G G IPG + L FE+EL+S
Sbjct: 103 EGCGESIPGNSVLIFEIELISF 124
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M EK + + YG+ G G IPG + L FE+EL+S
Sbjct: 84 MTKNEKCSVRLDSKYGYGEEGCGESIPGNSVLIFEIELISF 124
>pdb|2VN1|A Chain A, Crystal Structure Of The Fk506-Binding Domain Of
Plasmodium Falciparum Fkbp35 In Complex With Fk506
pdb|2VN1|B Chain B, Crystal Structure Of The Fk506-Binding Domain Of
Plasmodium Falciparum Fkbp35 In Complex With Fk506
Length = 129
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%)
Query: 178 FISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGD 237
++ E +G D DR+ PF F L G+VIKGWD ++ M EK + I YGD
Sbjct: 44 YVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGD 103
Query: 238 RGAGNVIPGGATLTFEVELLSI 259
G G IPG + L FE+ELLS
Sbjct: 104 EGCGESIPGNSVLLFEIELLSF 125
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 1 MCVGEKRK-----LTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
+CV RK + I YGD G G IPG + L FE+ELLS
Sbjct: 80 ICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSF 125
>pdb|2OFN|A Chain A, Solution Structure Of Fk506-Binding Domain (Fkbd)of Fkbp35
From Plasmodium Falciparum
Length = 135
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 45/82 (54%)
Query: 178 FISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGD 237
++ E +G D DR+ PF F L G+VIKGWD ++ M EK + I YGD
Sbjct: 44 YVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGD 103
Query: 238 RGAGNVIPGGATLTFEVELLSI 259
G G IPG + L FE+ELLS
Sbjct: 104 EGCGESIPGNSVLLFEIELLSF 125
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 1 MCVGEKRK-----LTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
+CV RK + I YGD G G IPG + L FE+ELLS
Sbjct: 80 ICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSF 125
>pdb|1PBK|A Chain A, Homologous Domain Of Human Fkbp25
Length = 116
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 197 QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV-IPGGATLTFEVE 255
+P +F +GVG+VI+GWD+ L M GEK +L I P AYG +G + IP A LTFEVE
Sbjct: 52 KPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVE 111
Query: 256 LLSI 259
L+ I
Sbjct: 112 LVDI 115
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNV-IPGGATLTFEVELLSI 41
M GEK +L I P AYG +G + IP A LTFEVEL+ I
Sbjct: 74 MSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDI 115
>pdb|1ROT|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda
Fk506-Binding Protein, Nmr, Minimized Average Structure
pdb|1ROU|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda
Fk506-Binding Protein, Nmr, 22 Structures
Length = 149
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 41/72 (56%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR F+F LG G+VIK WD + M VGE ++T P AYG G+ IP
Sbjct: 63 GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGELCRITCKPEYAYGSAGSPPKIP 122
Query: 246 GGATLTFEVELL 257
ATL FEVEL
Sbjct: 123 PNATLVFEVELF 134
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
M VGE ++T P AYG G+ IP ATL FEVEL
Sbjct: 96 MKVGELCRITCKPEYAYGSAGSPPKIPPNATLVFEVELF 134
>pdb|1Q1C|A Chain A, Crystal Structure Of N(1-260) Of Human Fkbp52
Length = 280
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 40/72 (55%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR F+F LG G+VIK WD + M VGE +T P AYG G+ IP
Sbjct: 84 GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIP 143
Query: 246 GGATLTFEVELL 257
ATL FEVEL
Sbjct: 144 PNATLVFEVELF 155
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
M VGE +T P AYG G+ IP ATL FEVEL
Sbjct: 117 MKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELF 155
>pdb|1N1A|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52
pdb|1N1A|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52
Length = 140
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 40/72 (55%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR F+F LG G+VIK WD + M VGE +T P AYG G+ IP
Sbjct: 64 GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIP 123
Query: 246 GGATLTFEVELL 257
ATL FEVEL
Sbjct: 124 PNATLVFEVELF 135
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
M VGE +T P AYG G+ IP ATL FEVEL
Sbjct: 97 MKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELF 135
>pdb|4DRJ|A Chain A, O-crystal Structure Of The Ppiase Domain Of Fkbp52,
Rapamycin And The Frb Fragment Of Mtor
Length = 144
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 40/72 (55%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR F+F LG G+VIK WD + M VGE +T P AYG G+ IP
Sbjct: 68 GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIP 127
Query: 246 GGATLTFEVELL 257
ATL FEVEL
Sbjct: 128 PNATLVFEVELF 139
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELL 39
M VGE +T P AYG G+ IP ATL FEVEL
Sbjct: 101 MKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELF 139
>pdb|3KZ7|A Chain A, C-Terminal Domain Of Murine Fkbp25 Rapamycin Complex
Length = 119
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 197 QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV-IPGGATLTFEVE 255
+P +F +GVG+VI+GWD+ L M GEK +L I P AYG +G + IP L FEVE
Sbjct: 55 KPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVE 114
Query: 256 LLSI 259
L+ I
Sbjct: 115 LVDI 118
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNV-IPGGATLTFEVELLSI 41
M GEK +L I P AYG +G + IP L FEVEL+ I
Sbjct: 77 MSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118
>pdb|1JVW|A Chain A, Trypanosoma Cruzi Macrophage Infectivity Potentiator
(Tcmip)
Length = 167
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 16/106 (15%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G D +R +P TF +VIKGW + L M G++ +L IP LAYG G G +IP
Sbjct: 70 GTVFDSSRERGKPTTFR--PNEVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGGMIP 127
Query: 246 GGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKK 291
+ L F+VEL+SI D K + EEV E L+K
Sbjct: 128 PYSPLEFDVELISI--------------KDGGKGRTAEEVDEILRK 159
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 14/73 (19%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADK 60
M G++ +L IP LAYG G G +IP + L F+VEL+SI D K
Sbjct: 101 MREGDRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISI--------------KDGGK 146
Query: 61 QLSREEVSEYLKK 73
+ EEV E L+K
Sbjct: 147 GRTAEEVDEILRK 159
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 28/144 (19%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+FKEID + D +S EEV ++ K+ ++++L++ IF+ D D
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAI---------------KNEQLLQLIFKSIDADG 49
Query: 110 NGFISHDEFSG---------PKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAE 160
NG I +EF+ D++GL ++K +D D D +L++EEV+ + KK +
Sbjct: 50 NGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI--- 106
Query: 161 GSEVEEIFQHEDKDKNGFISHDEF 184
+V E D + +G+I+ +EF
Sbjct: 107 -EKVAEQVMKADANGDGYITLEEF 129
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
+FKEID + D +S EEV ++ K+ ++ IF+ D D NG I +EF+
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 15/70 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+FKEID + D +S EEV ++ K+ ++++L++ IF+ D D
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAI---------------KNEQLLQLIFKSIDADG 49
Query: 328 NGFISHDEFS 337
NG I +EF+
Sbjct: 50 NGEIDQNEFA 59
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 19/76 (25%)
Query: 43 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 102
D++ ++K +D D D +L++EEV+ + K KH +E K+ E++
Sbjct: 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFK---------------KHGIE---KVAEQVM 114
Query: 103 QHEDKDKNGFISHDEF 118
+ D + +G+I+ +EF
Sbjct: 115 KA-DANGDGYITLEEF 129
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 19/76 (25%)
Query: 261 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 320
D++ ++K +D D D +L++EEV+ + K KH +E K+ E++
Sbjct: 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFK---------------KHGIE---KVAEQVM 114
Query: 321 QHEDKDKNGFISHDEF 336
+ D + +G+I+ +EF
Sbjct: 115 KA-DANGDGYITLEEF 129
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 28/144 (19%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+FKEID + D +S EEV ++ K+ ++++L++ IF+ D D
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAI---------------KNEQLLQLIFKSIDADG 49
Query: 110 NGFISHDEFSG---------PKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAE 160
NG I +EF+ D++GL ++K +D D D +L++EEV+ + KK +
Sbjct: 50 NGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI--- 106
Query: 161 GSEVEEIFQHEDKDKNGFISHDEF 184
+V E D + +G+I+ +EF
Sbjct: 107 -EKVAEQVMKADANGDGYITLEEF 129
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
+FKEID + D +S EEV ++ K+ ++ IF+ D D NG I +EF+
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 15/70 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+FKEID + D +S EEV ++ K+ ++++L++ IF+ D D
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAI---------------KNEQLLQLIFKSIDADG 49
Query: 328 NGFISHDEFS 337
NG I +EF+
Sbjct: 50 NGEIDQNEFA 59
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 19/76 (25%)
Query: 43 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 102
D++ ++K +D D D +L++EEV+ + K KH +E K+ E++
Sbjct: 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFK---------------KHGIE---KVAEQVM 114
Query: 103 QHEDKDKNGFISHDEF 118
+ D + +G+I+ +EF
Sbjct: 115 KA-DANGDGYITLEEF 129
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 19/76 (25%)
Query: 261 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 320
D++ ++K +D D D +L++EEV+ + K KH +E K+ E++
Sbjct: 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFK---------------KHGIE---KVAEQVM 114
Query: 321 QHEDKDKNGFISHDEF 336
+ D + +G+I+ +EF
Sbjct: 115 KA-DANGDGYITLEEF 129
>pdb|1Q6H|A Chain A, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli
pdb|1Q6H|B Chain B, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli
pdb|1Q6I|A Chain A, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli, In Complex With Immunosuppressant
Fk506
pdb|1Q6I|B Chain B, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli, In Complex With Immunosuppressant
Fk506
Length = 224
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G + D + R +P +F L VI GW +GL + G K KL IPP LAYG G IP
Sbjct: 153 GKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPG-IP 209
Query: 246 GGATLTFEVELLSI 259
+TL F+VELL +
Sbjct: 210 PNSTLVFDVELLDV 223
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 9 LTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
L IPP LAYG G IP +TL F+VELL +
Sbjct: 192 LVIPPELAYGKAGVPG-IPPNSTLVFDVELLDV 223
>pdb|1Q6U|A Chain A, Crystal Structure Of Fkpa From Escherichia Coli
Length = 245
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G + D + R +P +F L VI GW +GL + G K KL IPP LAYG G IP
Sbjct: 153 GKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPG-IP 209
Query: 246 GGATLTFEVELLSI 259
+TL F+VELL +
Sbjct: 210 PNSTLVFDVELLDV 223
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 9 LTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
L IPP LAYG G IP +TL F+VELL +
Sbjct: 192 LVIPPELAYGKAGVPG-IPPNSTLVFDVELLDV 223
>pdb|1FD9|A Chain A, Crystal Structure Of The Macrophage Infectivity
Potentiator Protein (Mip) A Major Virulence Factor From
Legionella Pneumophila
Length = 213
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G D +P TF V QVI GW + L M G ++ +P LAYG R G I
Sbjct: 138 GTVFDSTEKTGKPATFQ--VSQVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIG 195
Query: 246 GGATLTFEVELLSI 259
TL F++ L+S+
Sbjct: 196 PNETLIFKIHLISV 209
>pdb|3OE2|A Chain A, 1.6 A Crystal Structure Of Peptidyl-Prolyl Cis-Trans
Isomerase Ppiase From Pseudomonas Syringae Pv. Tomato
Str. Dc3000 (Pspto Dc3000)
Length = 219
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 197 QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVEL 256
QP F L VI GW L M G K +L IP AYG GAG++I L FE+EL
Sbjct: 157 QPQWFRLD--SVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIEL 214
Query: 257 LSI 259
+++
Sbjct: 215 IAV 217
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M G K +L IP AYG GAG++I L FE+EL+++
Sbjct: 177 MPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAV 217
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 19/163 (11%)
Query: 35 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 87
+ +L +G ++TT T +F+++D++ D QL R+E+ E +K M + D
Sbjct: 297 QAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDS 356
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPN------VFKEIDSDADK 141
+ E V+ I Q D D+NG+I + EF D+ L + F++ DSD
Sbjct: 357 SQIEAE----VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSG 412
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+++ EE+ + + ++ Q DK+ +G + +EF
Sbjct: 413 KITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEF 453
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 253 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 305
+ +L +G ++TT T +F+++D++ D QL R+E+ E +K M + D
Sbjct: 297 QAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDS 356
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ E V+ I Q D D+NG+I + EF
Sbjct: 357 SQIEAE----VDHILQSVDFDRNGYIEYSEF 383
>pdb|2UZ5|A Chain A, Solution Structure Of The Fkbp-Domain Of Legionella
Pneumophila Mip
pdb|2VCD|A Chain A, Solution Structure Of The Fkbp-domain Of Legionella
Pneumophila Mip In Complex With Rapamycin
Length = 137
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G D +P TF V QVI GW + L M G ++ +P LAYG R G I
Sbjct: 62 GTVFDSTEKTGKPATFQ--VSQVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIG 119
Query: 246 GGATLTFEVELLSI 259
TL F++ L+S+
Sbjct: 120 PNETLIFKIHLISV 133
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 38 LLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHM 90
+L +G ++TT T +F+++D++ D QL R+E+ E +K M + D +
Sbjct: 26 MLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI 85
Query: 91 LEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPN------VFKEIDSDADKQLS 144
E V+ I Q D D+NG+I + EF D+ L + F++ DSD +++
Sbjct: 86 EAE----VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKIT 141
Query: 145 REEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
EE+ + + ++ Q DK+ +G + +EF
Sbjct: 142 NEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEF 179
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 256 LLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHM 308
+L +G ++TT T +F+++D++ D QL R+E+ E +K M + D +
Sbjct: 26 MLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI 85
Query: 309 LEEHDKLVEEIFQHEDKDKNGFISHDEF 336
E V+ I Q D D+NG+I + EF
Sbjct: 86 EAE----VDHILQSVDFDRNGYIEYSEF 109
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 35 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 87
+ LL +G ++T+ T +F ++D + D QL R E+ E K+ M D
Sbjct: 342 QAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDA 401
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPN------VFKEIDSDADK 141
+ E D++++ + D DKNG+I + EF D L + F+ DSD
Sbjct: 402 SAVEHEVDQVLDAV----DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSG 457
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
++S E++ V +E + + DK+ +G + DEF
Sbjct: 458 KISSTELATIFGVSDVDSE--TWKSVLSEVDKNNDGEVDFDEF 498
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 253 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 305
+ LL +G ++T+ T +F ++D + D QL R E+ E K+ M D
Sbjct: 342 QAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDA 401
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ E D++++ + D DKNG+I + EF
Sbjct: 402 SAVEHEVDQVLDAV----DFDKNGYIEYSEF 428
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 35 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 87
+ LL +G ++T+ T +F ++D + D QL R E+ E K+ M D
Sbjct: 341 QAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDA 400
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPN------VFKEIDSDADK 141
+ E D++++ + D DKNG+I + EF D L + F+ DSD
Sbjct: 401 SAVEHEVDQVLDAV----DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSG 456
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
++S E++ V +E + + DK+ +G + DEF
Sbjct: 457 KISSTELATIFGVSDVDSE--TWKSVLSEVDKNNDGEVDFDEF 497
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 253 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 305
+ LL +G ++T+ T +F ++D + D QL R E+ E K+ M D
Sbjct: 341 QAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDA 400
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ E D++++ + D DKNG+I + EF
Sbjct: 401 SAVEHEVDQVLDAV----DFDKNGYIEYSEF 427
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 32/146 (21%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+FK++D++ D +S EEV ++ + ++++L++ IF+ D D
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPI---------------KNEQLLQLIFKAIDIDG 49
Query: 110 NGFISHDEFS----GPKHDEL-----GLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAE 160
NG I EF+ K +L GL ++K +D+D D +L++EEV+ + KK
Sbjct: 50 NGEIDLAEFTKFAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKF----- 104
Query: 161 GSE--VEEIFQHEDKDKNGFISHDEF 184
G E V++I + D + +G+I+ +EF
Sbjct: 105 GYEKVVDQIMKA-DANGDGYITLEEF 129
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
+FK++D++ D +S EEV ++ + ++ IF+ D D NG I EF+
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFT 59
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 19/69 (27%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
++K +D+D D +L++EEV+ + KK ++K+V++I + D +
Sbjct: 80 LYKLMDADGDGKLTKEEVTTFFKKF------------------GYEKVVDQIMKA-DANG 120
Query: 328 NGFISHDEF 336
+G+I+ +EF
Sbjct: 121 DGYITLEEF 129
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 35 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 87
+ LL +G ++T+ T +F ++D + D QL R E+ E K+ M D
Sbjct: 318 QAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDA 377
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPN------VFKEIDSDADK 141
+ E D++++ + D DKNG+I + EF D L + F+ DSD
Sbjct: 378 SAVEHEVDQVLDAV----DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSG 433
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
++S E++ V +E + + DK+ +G + DEF
Sbjct: 434 KISSTELATIFGVSDVDSE--TWKSVLSEVDKNNDGEVDFDEF 474
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 253 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 305
+ LL +G ++T+ T +F ++D + D QL R E+ E K+ M D
Sbjct: 318 QAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDA 377
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ E D++++ + D DKNG+I + EF
Sbjct: 378 SAVEHEVDQVLDAV----DFDKNGYIEYSEF 404
>pdb|1IX5|A Chain A, Solution Structure Of The Methanococcus
Thermolithotrophicus Fkbp
Length = 151
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 194 DRD-QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDR 238
DR+ +P F +G GQ+I+G+++ + +M VG+++ + IP AYG+R
Sbjct: 39 DREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNR 84
>pdb|3PRB|A Chain A, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
pdb|3PRB|B Chain B, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
pdb|3PRD|A Chain A, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
Length = 231
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 198 PFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDR 238
P G GQV+ G D+ + EM VGE+R++ +PP A+G R
Sbjct: 43 PVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKR 83
>pdb|3B7X|A Chain A, Crystal Structure Of Human Fk506-Binding Protein 6
Length = 134
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 32/73 (43%)
Query: 189 HDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGA 248
D + R P LG + G + GL M GE + P AYG G +IP
Sbjct: 62 FDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNT 121
Query: 249 TLTFEVELLSIGD 261
T+ FE+ELL D
Sbjct: 122 TVLFEIELLDFLD 134
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGD 43
M GE + P AYG G +IP T+ FE+ELL D
Sbjct: 92 MRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFLD 134
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 19/163 (11%)
Query: 35 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 87
+ LL G ++T+ T +F + D + D QL R E+ E K ++ +G + A +
Sbjct: 318 QAALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYK-ELXRXKGQD-ASXL 375
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPN------VFKEIDSDADK 141
EH+ V+++ D DKNG+I + EF D L + F+ DSD
Sbjct: 376 DASAVEHE--VDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSG 433
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
++S E++ V +E + + DK+ +G + DEF
Sbjct: 434 KISSTELATIFGVSDVDSE--TWKSVLSEVDKNNDGEVDFDEF 474
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 253 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 305
+ LL G ++T+ T +F + D + D QL R E+ E K ++ +G + A +
Sbjct: 318 QAALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYK-ELXRXKGQD-ASXL 375
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
EH+ V+++ D DKNG+I + EF
Sbjct: 376 DASAVEHE--VDQVLDAVDFDKNGYIEYSEF 404
>pdb|3PR9|A Chain A, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
pdb|3PRA|A Chain A, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
pdb|3PRA|B Chain B, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
Length = 157
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 198 PFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDR 238
P G GQV+ G D+ + EM VGE+R++ +PP A+G R
Sbjct: 43 PVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKR 83
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 27 PGGATLTFE--VELLSIGDQVTTTNV-----FKEIDSDADKQLSREEVSEYLKKQMVAAE 79
P +L+FE ++LLS+ T ++ F+ D D D L+RE++S ++V
Sbjct: 104 PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLS-----RLVNCL 158
Query: 80 GSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 118
EG ED + E +L++ I + D D++G I+ EF
Sbjct: 159 TGEG-EDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 196
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 245 PGGATLTFE--VELLSIGDQVTTTNV-----FKEIDSDADKQLSREEVSEYLKKQMVAAE 297
P +L+FE ++LLS+ T ++ F+ D D D L+RE++S ++V
Sbjct: 104 PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLS-----RLVNCL 158
Query: 298 GSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
EG ED + E +L++ I + D D++G I+ EF
Sbjct: 159 TGEG-EDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 196
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 100 EIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEYLK 153
E F DKD +G I+ E G E L ++ E+D+D + + E +
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 69
Query: 154 KQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
++M + E+ E F+ DKD NG+IS E
Sbjct: 70 RKMKDTDSEEIREAFRVFDKDGNGYISAAEL 100
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 27 PGGATLTFE--VELLSIGDQVTTTNV-----FKEIDSDADKQLSREEVSEYLKKQMVAAE 79
P +L+FE ++LLS+ T ++ F+ D D D L+RE++S ++V
Sbjct: 73 PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLS-----RLVNCL 127
Query: 80 GSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 118
EG ED + E +L++ I + D D++G I+ EF
Sbjct: 128 TGEG-EDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 165
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 245 PGGATLTFE--VELLSIGDQVTTTNV-----FKEIDSDADKQLSREEVSEYLKKQMVAAE 297
P +L+FE ++LLS+ T ++ F+ D D D L+RE++S ++V
Sbjct: 73 PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLS-----RLVNCL 127
Query: 298 GSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
EG ED + E +L++ I + D D++G I+ EF
Sbjct: 128 TGEG-EDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 165
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 14/91 (15%)
Query: 253 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 305
+ +L IG ++TT T++FK++D + D QL ++E+ E V ++
Sbjct: 338 QAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIE---GYNVLRNFKNELGEL 394
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
K++ EE D +++E+ D DKNG+I + EF
Sbjct: 395 KNVEEEVDNILKEV----DFDKNGYIEYSEF 421
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 46/160 (28%)
Query: 35 EVELLSIGDQVTT-------TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDV 87
+ +L IG ++TT T++FK++D + D QL ++E+ EG +
Sbjct: 338 QAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKEL----------IEGYNVLRNF 387
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREE 147
K+ L E + EE+ N+ KE+D D + + E
Sbjct: 388 KNELGELKNVEEEV---------------------------DNILKEVDFDKNGYIEYSE 420
Query: 148 -VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSG 186
+S + KQ++ +E + F D DK+G I+ +E +
Sbjct: 421 FISVCMDKQILFSE-ERLRRAFNLFDTDKSGKITKEELAN 459
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 124 DELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
D++GL ++K +D D D +L++EEV+ + KK + +V E D + +G+I+ +E
Sbjct: 3 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEE 58
Query: 184 F 184
F
Sbjct: 59 F 59
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 19/76 (25%)
Query: 43 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 102
D++ ++K +D D D +L++EEV+ + KK + +K+ E++
Sbjct: 3 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI------------------EKVAEQVM 44
Query: 103 QHEDKDKNGFISHDEF 118
+ D + +G+I+ +EF
Sbjct: 45 K-ADANGDGYITLEEF 59
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 19/76 (25%)
Query: 261 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 320
D++ ++K +D D D +L++EEV+ + KK + +K+ E++
Sbjct: 3 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI------------------EKVAEQVM 44
Query: 321 QHEDKDKNGFISHDEF 336
+ D + +G+I+ +EF
Sbjct: 45 K-ADANGDGYITLEEF 59
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADK 141
EE D ++EE+ D+D +G I +EF K D G L N F+ D +AD
Sbjct: 53 EELDAIIEEV----DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADG 108
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ EE+ E L+ ++E++ + DK+ +G I DEF
Sbjct: 109 FIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 151
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADK 141
EE D ++EE+ D+D +G I +EF K D G L N F+ D +AD
Sbjct: 56 EELDAIIEEV----DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADG 111
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ EE+ E L+ ++E++ + DK+ +G I DEF
Sbjct: 112 FIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 26 IPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAE 85
+ A L +L S + T++F+ ID + D QL R+E+ + K G E
Sbjct: 327 LAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKL-------SGEE 379
Query: 86 DVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELG------LPNVFKEIDSDA 139
L + + V+ I D D+NG+I + EF D L + F++ D D
Sbjct: 380 VAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDG 439
Query: 140 DKQLSREEVS 149
+ ++S +E++
Sbjct: 440 NGKISVDELA 449
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 244 IPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAE 303
+ A L +L S + T++F+ ID + D QL R+E+ + K G E
Sbjct: 327 LAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKL-------SGEE 379
Query: 304 DVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
L + + V+ I D D+NG+I + EF
Sbjct: 380 VAVFDLPQIESEVDAILGAADFDRNGYIDYSEF 412
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 27/175 (15%)
Query: 26 IPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVS----EYLK------KQM 75
+ A L +L ++ + T +F+++D++ D L R+E+ E+++ +
Sbjct: 312 LAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSL 371
Query: 76 VAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPN----- 130
+ EGS + + D L+ + D D +G I + EF D L +
Sbjct: 372 IQNEGSTIEDQI-------DSLMPLL----DMDGSGSIEYSEFIASAIDRTILLSRERME 420
Query: 131 -VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
FK D D ++S +E+ + + + + E+E I + D +K+G + +EF
Sbjct: 421 RAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEF 475
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 26 IPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAE 85
+ A L +L S + T++F+ ID + D QL R+E+ + K G E
Sbjct: 44 LAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKL-------SGEE 96
Query: 86 DVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELG------LPNVFKEIDSDA 139
L + + V+ I D D+NG+I + EF D L + F++ D D
Sbjct: 97 VAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDG 156
Query: 140 DKQLSREEVS 149
+ ++S +E++
Sbjct: 157 NGKISVDELA 166
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 244 IPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAE 303
+ A L +L S + T++F+ ID + D QL R+E+ + K G E
Sbjct: 44 LAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKL-------SGEE 96
Query: 304 DVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
L + + V+ I D D+NG+I + EF
Sbjct: 97 VAVFDLPQIESEVDAILGAADFDRNGYIDYSEF 129
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADK 141
EE D ++EE+ D+D +G I +EF K D G L N F+ D +AD
Sbjct: 56 EELDAIIEEV----DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADG 111
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ EE+ E L+ ++E++ + DK+ +G I DEF
Sbjct: 112 FIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 154
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 15/71 (21%)
Query: 48 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 107
N F+ D +AD + EE+ E L+ A G +H++EE +E++ + DK
Sbjct: 99 ANCFRIFDKNADGFIDIEELGEILR-----ATG-------EHVIEED---IEDLMKDSDK 143
Query: 108 DKNGFISHDEF 118
+ +G I DEF
Sbjct: 144 NNDGRIDFDEF 154
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 15/71 (21%)
Query: 266 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 325
N F+ D +AD + EE+ E L+ A G +H++EE +E++ + DK
Sbjct: 99 ANCFRIFDKNADGFIDIEELGEILR-----ATG-------EHVIEED---IEDLMKDSDK 143
Query: 326 DKNGFISHDEF 336
+ +G I DEF
Sbjct: 144 NNDGRIDFDEF 154
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 90 MLEEHDKLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQL 143
++ H K + E+F D + NG +SH E G K + + + + +D + +
Sbjct: 33 VINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALDINDRGNI 90
Query: 144 SREEVSE--YLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTF 201
+ E Y K + E + ++ F DKD++G+IS + HD++ D + F
Sbjct: 91 TYTEFMAGCYRWKNI---ESTFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNF 147
Query: 202 TLGVGQVIKG 211
L V + KG
Sbjct: 148 FLSVHSIKKG 157
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
+FKEID + D +S EEV ++ K+ ++ IF+ D D NG I +EF+
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 15/70 (21%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+FKEID + D +S EEV ++ K+ ++++L++ IF+ D D
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAI---------------KNEQLLQLIFKSIDADG 49
Query: 110 NGFISHDEFS 119
NG I +EF+
Sbjct: 50 NGEIDQNEFA 59
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 15/70 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+FKEID + D +S EEV ++ K+ ++++L++ IF+ D D
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAI---------------KNEQLLQLIFKSIDADG 49
Query: 328 NGFISHDEFS 337
NG I +EF+
Sbjct: 50 NGEIDQNEFA 59
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
+FK D++ D ++S E+ + LK + + EV + D D +GFIS DEF+
Sbjct: 16 IFKRFDTNGDGKISSSELGDALK-TLGSVTPDEVRRMMAEIDTDGDGFISFDEFT 69
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 16/79 (20%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+FK D++ D ++S E+ + LK GS ++V+ M+ E D D
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTL-----GSVTPDEVRRMMAEIDT-----------DG 59
Query: 110 NGFISHDEFSGPKHDELGL 128
+GFIS DEF+ GL
Sbjct: 60 DGFISFDEFTDFARANRGL 78
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 16/70 (22%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+FK D++ D ++S E+ + LK GS ++V+ M+ E D D
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTL-----GSVTPDEVRRMMAEIDT-----------DG 59
Query: 328 NGFISHDEFS 337
+GFIS DEF+
Sbjct: 60 DGFISFDEFT 69
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADK 141
EE D ++EE+ D+D +G I +EF K D G L +F+ D +AD
Sbjct: 53 EELDAIIEEV----DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADG 108
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ EE++E + E+E + + DK+ +G I DEF
Sbjct: 109 YIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEF 151
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQ 142
++ EE +E F DKD NG IS E + G E + ++ EID D + Q
Sbjct: 4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 63
Query: 143 LSREEVSEYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
+ E + +Q+ + + E+ E F+ DK+ +G IS E
Sbjct: 64 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAEL 106
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADK 141
EE D ++EE+ D+D +G I +EF K D G L F+ D +AD
Sbjct: 53 EELDAIIEEV----DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADG 108
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ EE++E + E+E + + DK+ +G I DEF
Sbjct: 109 YIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEF 151
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 16/77 (20%)
Query: 43 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 102
D+ +FK D++ D ++S E+ E LK GS ++VKHM+ E D
Sbjct: 7 DKAERERIFKRFDANGDGKISAAELGEALKTL-----GSITPDEVKHMMAEIDT------ 55
Query: 103 QHEDKDKNGFISHDEFS 119
D +GFIS EF+
Sbjct: 56 -----DGDGFISFQEFT 67
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 16/77 (20%)
Query: 261 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 320
D+ +FK D++ D ++S E+ E LK GS ++VKHM+ E D
Sbjct: 7 DKAERERIFKRFDANGDGKISAAELGEALKTL-----GSITPDEVKHMMAEIDT------ 55
Query: 321 QHEDKDKNGFISHDEFS 337
D +GFIS EF+
Sbjct: 56 -----DGDGFISFQEFT 67
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 130 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
+FK D++ D ++S E+ E LK + + EV+ + D D +GFIS EF+
Sbjct: 13 RIFKRFDANGDGKISAAELGEALK-TLGSITPDEVKHMMAEIDTDGDGFISFQEFT 67
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADK 141
EE D ++EE+ D+D +G I +EF K D G L + F+ D +AD
Sbjct: 56 EELDAIIEEV----DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADG 111
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ EE+ E L+ ++E++ + DK+ +G I DEF
Sbjct: 112 FIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADKQLSREE 147
++E+ D+D +G + DEF K D G L ++F+ D +AD + EE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADKQLSREE 147
++E+ D+D +G + DEF K D G L ++F+ D +AD + EE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADKQLSREE 147
++E+ D+D +G + DEF K D G L ++F+ D +AD + EE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F+ +D+D +S E++ AA S G V L +KL+ DK+ +
Sbjct: 33 FRAVDTDGSGAISVPELN--------AALSSAG---VPFSLATTEKLL----HMYDKNHS 77
Query: 111 GFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQH 170
G I+ DEF H L + F++ DS D +L EV L + + +
Sbjct: 78 GEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK 137
Query: 171 EDKDKNGFISHDEF 184
D+ + G + D++
Sbjct: 138 FDRQRRGSLGFDDY 151
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSGP 187
L F+ +D+D +S E++ L V + E++ DK+ +G I+ DEF
Sbjct: 29 LMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDL 88
Query: 188 KHDELHDRD 196
H L R+
Sbjct: 89 HHFILSMRE 97
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQ 142
++ EE +E F DKD NG IS E + G E + ++ EID D + Q
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 143 LSREEVSEYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
+ E + +Q+ + + E+ E F+ DK+ +G IS E
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAEL 105
>pdb|2F2D|A Chain A, Solution Structure Of The Fk506-Binding Domain Of Human
Fkbp38
pdb|3EY6|A Chain A, Crystal Structure Of The Fk506-Binding Domain Of Human
Fkbp38
Length = 121
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 26/58 (44%)
Query: 199 FTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVEL 256
FTLG VI+ D + M VGE +T YG +G IP A L EV L
Sbjct: 54 LVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTL 111
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADK 141
EE D ++EE+ D+D +G I +EF K D G L + F+ D +AD
Sbjct: 56 EELDAIIEEV----DEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADG 111
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ EE+ E L+ ++E++ + DK+ +G I DEF
Sbjct: 112 FIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
>pdb|2AWG|A Chain A, Structure Of The Ppiase Domain Of The Human Fk506-Binding
Protein 8
Length = 118
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 26/58 (44%)
Query: 199 FTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVEL 256
FTLG VI+ D + M VGE +T YG +G IP A L EV L
Sbjct: 56 LVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTL 113
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQ 142
++ EE +E F DKD NG IS E + G E + ++ EID D + Q
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 143 LSREEVSEYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
+ E + +Q+ + + E+ E F+ DK+ +G IS E
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAEL 105
>pdb|2KR7|A Chain A, Solution Structure Of Helicobacter Pylori Slyd
Length = 151
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 197 QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYG 236
+P F +G Q+I G ++ + + +GE ++ I P AYG
Sbjct: 35 EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYG 74
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 127 GLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
GL F ID+D Q++ EE+ LK+ + SE+ ++ Q D D +G I + EF
Sbjct: 28 GLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEF 85
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F ID+D Q++ EE+ LK+ V L+E + L ++ Q D D +
Sbjct: 33 FNXIDADKSGQITFEELKAGLKR-------------VGANLKESEIL--DLXQAADVDNS 77
Query: 111 GFISHDEFSGPK------HDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEV 164
G I + EF E L F D D ++ +E+ + ++ E +
Sbjct: 78 GTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEE--FGVEDVRI 135
Query: 165 EEIFQHEDKDKNGFISHDEF 184
EE+ + D+D +G I ++EF
Sbjct: 136 EELXRDVDQDNDGRIDYNEF 155
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 91 LEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHD----ELGLPNVFKEIDSDADKQLSRE 146
LE + LV F + DKD +G+I+ DE D ++ + ++ KEID D D Q+
Sbjct: 78 LEREENLVSA-FSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYG 136
Query: 147 EVSEYLKKQ 155
E + ++K+
Sbjct: 137 EFAAMMRKR 145
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 127 GLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
GL +FK ID+D ++ +E+ + LK+ SE++++ D DK+G I + EF
Sbjct: 11 GLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 68
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADKQLSREE 147
++E+ D+D +G + DEF K D G L ++F+ D +AD + +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDE 116
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 127 GLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
GL +FK ID+D ++ +E+ + LK+ SE++++ D DK+G I + EF
Sbjct: 24 GLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADKQLSREE 147
++E+ D+D +G + DEF K D G L ++F+ D +AD + +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDE 116
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
>pdb|4B4T|S Chain S, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
Length = 523
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 212 WDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKE 271
WD E V RK+ IP L Y + + N+I A L F + L T +E
Sbjct: 147 WDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLI--NAKLWFYIYL----SHETLARSSEE 200
Query: 272 IDSDADKQLSREEVSEYLK 290
I+SD + R + ++LK
Sbjct: 201 INSDNQNIILRSTMMKFLK 219
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 33.1 bits (74), Expect = 0.26, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ +FK D++ D ++S E+++ L+ + + EV+ + D D +GFI +EF
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRT-LGSTSADEVQRMMAEIDTDGDGFIDFNEF 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 32.7 bits (73), Expect = 0.29, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ +FK D++ D ++S E+++ L+ + + EV+ + D D +GFI +EF
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRT-LGSTSADEVQRMMAEIDTDGDGFIDFNEF 59
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADKQLSREE 147
++E+ D+D +G + DEF K D G L ++F+ D +AD + +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ L+ ++EE+ + DK+ +G I +DE+
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEW 153
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 75 MVAAEGSEGAEDVKHMLEEHDKL---------VEEIFQHEDKDKNGFISHDEFSGPKHDE 125
+ AA G V ++L E + + E F+ D+D NGFIS E G
Sbjct: 6 VTAALMYRGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQEL-GTAMRS 64
Query: 126 LG-LPN------VFKEIDSDADKQLSREEVSEYL 152
LG +PN + + +D D D Q+ EE L
Sbjct: 65 LGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
L N F+ D +AD + EE+ E L+ ++E++ + DK+ +G I DEF
Sbjct: 12 LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
L ++F+ D +AD + EE+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 17 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
>pdb|3OLN|A Chain A, Crystal Structure Of The Sra Domain Of E3
Ubiquitin-Protein Ligase Uhrf2
pdb|3OLN|B Chain B, Crystal Structure Of The Sra Domain Of E3
Ubiquitin-Protein Ligase Uhrf2
Length = 231
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 212 WDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIG 260
W +G+ CVG R+ TI P+ YG IP G+T F V++ G
Sbjct: 9 WGRGMA--CVGRTRECTIVPSNHYGPIPG---IPVGSTWRFRVQVSEAG 52
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-----SGPKHDELG-----LPNVFKEIDSDADKQLSREE 147
++E+ D+D +G + DEF K D G L ++F+ D +AD + +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
+ L+ ++EE+ + DK+ +G I +DE
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
L ++F+ D +AD + EE+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 9 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
>pdb|2JWX|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
Fkbp38 (Fkbp38ntd)
Length = 157
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 199 FTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA-GNVIPGGATLTFEVEL 256
FTLG VI+ D + M VGE +T YG +G+ IP A L EV L
Sbjct: 86 LVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTL 144
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
L ++F+ D +AD + EE+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 12 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 68
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
L ++F+ D +AD + EE+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 7 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 101 IFQHEDKDKNGFISHDEF----SGPKHDEL--GLPNVFKEIDSDADKQLSREEV-----S 149
+F DKD NGFI +EF S L L F+ D + D ++ +E+ S
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 150 EY-LKKQMV------AAEGSEVEEIFQHEDKDKNGFISHDEF 184
Y + MV A V++IF+ DK+++G+I+ DEF
Sbjct: 128 VYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 54 IDSDADKQLSREEVSEYLKKQMVAAEGSEGAE-------DVKHMLEEHDKLVEEIFQHED 106
+DS A ++LS E ++ KK M + +K++ +K VE++F+ D
Sbjct: 3 MDSKAVEELSATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFD 62
Query: 107 KDKNGFISHDEFSGPKHDEL------GLPNVFKEIDSDADKQLSREEVSEYLK------- 153
+K+G+I E+ L L FK D D + + R E+ +K
Sbjct: 63 FNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINR 122
Query: 154 --KQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS-GPKHDEL 192
+ M A E + + +F D + +G +S +EF G + DE+
Sbjct: 123 CNEAMTAEEFTNM--VFDKIDINGDGELSLEEFMEGVQKDEV 162
>pdb|2D9F|A Chain A, Solution Structure Of Ruh-047, An Fkbp Domain From Human
Cdna
Length = 135
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 199 FTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA-GNVIPGGATLTFEVEL 256
FTLG VI+ D + M VGE +T YG +G+ IP A L EV L
Sbjct: 60 LVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTL 118
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 30/135 (22%)
Query: 60 KQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEE-----IFQHEDKDKNGFIS 114
+Q S EE E G+ GA D + E + K +EE +F HE K
Sbjct: 3 QQFSWEEAEE---------NGAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRF----- 48
Query: 115 HDEFSGPKHDELG--LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS---EVEEIFQ 169
F P ++E + +F+ D++ D + + EY+ + G+ +++ F+
Sbjct: 49 ---FKVPDNEEATQYVEAMFRAFDTNGDNTI---DFLEYVAALNLVLRGTLEHKLKWTFK 102
Query: 170 HEDKDKNGFISHDEF 184
DKD+NG I E
Sbjct: 103 IYDKDRNGCIDRQEL 117
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEG-----SEVEEIFQHEDKDKNGFISHD 182
+ VFK ID+DA + EE+ LK AA+G +E + + DKD +G I D
Sbjct: 44 VKKVFKAIDADASGFIEEEELKFVLKS--FAADGRDLTDAETKAFLKAADKDGDGKIGID 101
Query: 183 EFSGPKH 189
EF H
Sbjct: 102 EFETLVH 108
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 101 IFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKK 154
+F+ DK+K+G +S DEF P + + F+EID D + +L+ +E + ++K
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65
Query: 155 QM 156
+
Sbjct: 66 ML 67
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 98 VEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
+ E F+ EDKD NG+IS E G K + + + +E D D D Q++ EE +
Sbjct: 31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 90
Query: 152 L 152
+
Sbjct: 91 M 91
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 22/104 (21%)
Query: 101 IFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYL 152
+F D D NG +S ++F G ++L F D + D +++EE+ + +
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWA--FNLYDINKDGYITKEEMLDIM 164
Query: 153 KK--QMVA----------AEGSEVEEIFQHEDKDKNGFISHDEF 184
K M+ A VE FQ DK+K+G ++ DEF
Sbjct: 165 KAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
L +VF D++ +L REE + V ++ E +FQ D D++G I+ EF+
Sbjct: 29 LRSVFAACDANRSGRLEREEFRALCTELRVRP--ADAEAVFQRLDADRDGAITFQEFA 84
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
L ++F+ D +AD + +E+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQ 142
HM + ++ ++E F+ DKD+NG+IS E G K + + + KE D D D Q
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 143 LSREE 147
++ EE
Sbjct: 62 VNYEE 66
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 27/88 (30%)
Query: 98 VEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMV 157
V+++F DKDK+GFI DE L ++ K SDA + LS +E K ++
Sbjct: 7 VKKVFHILDKDKSGFIEEDE----------LGSILKGFSSDA-RDLSAKET-----KTLM 50
Query: 158 AAEGSEVEEIFQHEDKDKNGFISHDEFS 185
AA DKD +G I +EFS
Sbjct: 51 AA-----------GDKDGDGKIGVEEFS 67
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 27/88 (30%)
Query: 98 VEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMV 157
V+++F DKDK+GFI + DELG + K DA + LS +E +M+
Sbjct: 44 VKKVFHMLDKDKSGFI--------EEDELGF--ILKGFSPDA-RDLSAKET------KML 86
Query: 158 AAEGSEVEEIFQHEDKDKNGFISHDEFS 185
A G DKD +G I DEFS
Sbjct: 87 MAAG----------DKDGDGKIGVDEFS 104
>pdb|1HXV|A Chain A, Ppiase Domain Of The Mycoplasma Genitalium Trigger Factor
Length = 113
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 176 NGFISHDEFSGPKHDE--LHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTI 229
NG I+ +F+G ++ Q + T+G IKG++ GL M V +K+ L +
Sbjct: 32 NGDIAIIDFTGIVDNKKLASASAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLAL 87
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 76 VAAEGSEGAEDVKHMLEEHDKLVEE-----IFQHEDKDKNGFISHDEFSGPKHDELGLPN 130
V+ G +D+K +L ++ + E +F + D G +S+ +D L
Sbjct: 133 VSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVA 192
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
F++ID++++ LSR+E E+ + + + S + +F++ D+D++ + E+
Sbjct: 193 DFRKIDTNSNGTLSRKEFREHFVR-LGFDKKSVQDALFRYADEDESDDVGFSEY 245
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 24/150 (16%)
Query: 40 SIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVE 99
++ DQ NVF+ +D D +S E+ + L S G + V
Sbjct: 2 ALPDQSFLWNVFQRVDKDRSGVISDTELQQAL---------SNGT-----WTPFNPVTVR 47
Query: 100 EIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAA 159
I D++ ++ EF+G NVF+ D D + + E+ KQ ++
Sbjct: 48 SIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNEL-----KQALSG 102
Query: 160 EGSEVEEIF-----QHEDKDKNGFISHDEF 184
G + + F + D+ G I+ D+F
Sbjct: 103 AGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 29 GATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVK 88
G TL +EL IG + + +++ ++ QL+ E+++E+ + + + +G K
Sbjct: 238 GDTLVNRIELKGIGFKEDGNILGHKLEYNSRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 297
Query: 89 HMLEEHDKL--------VEEIFQHEDKDKNGFISHDEFSGPKHDELG-------LPNVFK 133
+ L ++++ D D NG I EF ++ + F+
Sbjct: 298 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 357
Query: 134 EIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
D D + +S E+ + EV+E+ + D D +G ++++EF
Sbjct: 358 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 408
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 27/88 (30%)
Query: 98 VEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMV 157
V+++F DKDK+GFI DE L ++ K SDA + LS +E K ++
Sbjct: 43 VKKVFHILDKDKDGFIDEDE----------LGSILKGFSSDA-RDLSAKET-----KTLM 86
Query: 158 AAEGSEVEEIFQHEDKDKNGFISHDEFS 185
AA DKD +G I +EFS
Sbjct: 87 AA-----------GDKDGDGKIGVEEFS 103
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 27/88 (30%)
Query: 98 VEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMV 157
V+++F DKDK+GFI DE L ++ K SDA + LS +E K ++
Sbjct: 43 VKKVFHILDKDKSGFIEEDE----------LGSILKGFSSDA-RDLSAKET-----KTLM 86
Query: 158 AAEGSEVEEIFQHEDKDKNGFISHDEFS 185
AA DKD +G I +EFS
Sbjct: 87 AA-----------GDKDGDGKIGVEEFS 103
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 98 VEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREE 147
++E F+ DKD+NG+IS E G K + + + KE D D D Q++ EE
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE-VEEIFQHEDKDKNGFISHDEF 184
L ++ E+D+D + + E + ++M + E + E F+ DKD NG+IS E
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 98 VEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREE 147
++E F+ DKD+NGFIS E G K + + + +E D D D Q++ EE
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 71/171 (41%), Gaps = 15/171 (8%)
Query: 29 GATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVK 88
G TL +EL IG + + +++ + QL+ E+++E+ + + + +G K
Sbjct: 238 GDTLVNRIELKGIGFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK 297
Query: 89 HMLEEHDKL--------VEEIFQHEDKDKNGFISHDEFSGPKHDELG-------LPNVFK 133
+ L ++++ D D NG I EF ++ + F+
Sbjct: 298 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 357
Query: 134 EIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
D D + +S E+ + EV+E+ + D D +G ++++EF
Sbjct: 358 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 408
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 27/88 (30%)
Query: 98 VEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMV 157
V+++F DKDK+GFI DE L ++ K SDA + LS +E K ++
Sbjct: 43 VKKVFHILDKDKSGFIEEDE----------LGSILKGFSSDA-RDLSAKET-----KTLM 86
Query: 158 AAEGSEVEEIFQHEDKDKNGFISHDEFS 185
AA DKD +G I +EFS
Sbjct: 87 AA-----------GDKDGSGKIEVEEFS 103
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 27/82 (32%)
Query: 163 EVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVG 222
+V+++F DKDK+GFI DE +G ++KG+ ++
Sbjct: 42 DVKKVFHILDKDKSGFIEEDE---------------------LGSILKGFSSDARDLSAK 80
Query: 223 EKRKLTIPPALAYGDR-GAGNV 243
E + L +A GD+ G+G +
Sbjct: 81 ETKTL-----MAAGDKDGSGKI 97
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 19/113 (16%)
Query: 97 LVEEIFQHEDKDKNGFISHDEF----SGPKHDELG--LPNVFKEIDSDADKQLSREEVSE 150
E +F D DKNG+I EF S EL L F+ D D + +S +E+
Sbjct: 64 FAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLR 123
Query: 151 YLKK--QMVAA----------EGSEVEEIFQHEDKDKNGFISHDEFS-GPKHD 190
+ +MV + V +IF DK+K+G ++ +EF G K D
Sbjct: 124 IVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRD 176
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 123 HDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEE---IFQHEDKDKNGFI 179
+D L +F EID+ + + EE + K + A G++VE+ +F+ DK+ G +
Sbjct: 127 YDFFELTVMFDEIDASGNMLVDEEEFKRAVPK--LEAWGAKVEDPAALFKELDKNGTGSV 184
Query: 180 SHDEFSG 186
+ DEF+
Sbjct: 185 TFDEFAA 191
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 22/111 (19%)
Query: 102 FQHEDKDKNGFISHDEFSGPKHDELGLPN--------------VFKEIDSDADKQLSREE 147
++ D D +GFI +E D L N + K DS+ D +L E
Sbjct: 109 WRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTE 168
Query: 148 VSEYL--------KKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHD 190
++ L K Q + G E + F+ D+D NG+I +E D
Sbjct: 169 MARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKD 219
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 24/150 (16%)
Query: 40 SIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVE 99
++ DQ NVF+ +D D +S E+ + L S G + V
Sbjct: 2 ALPDQSFLWNVFQRVDKDRSGVISDTELQQAL---------SNGT-----WTPFNPVTVR 47
Query: 100 EIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAA 159
I D++ ++ EF+G NVF+ D D + + E+ KQ ++
Sbjct: 48 SIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNEL-----KQALSG 102
Query: 160 EGSEVEEIF-----QHEDKDKNGFISHDEF 184
G + + F + D+ G I+ D+F
Sbjct: 103 FGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 16/143 (11%)
Query: 42 GDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEI 101
DQ NVF+ +D D +S E+ + L S G + V I
Sbjct: 1 ADQSFLWNVFQRVDKDRSGVISDTELQQAL---------SNGT-----WTPFNPVTVRSI 46
Query: 102 FQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEG 161
D++ ++ EF+G NVF+ D D + + E+ + L ++ +
Sbjct: 47 ISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGYRLSDQF 106
Query: 162 SEVEEIFQHEDKDKNGFISHDEF 184
++ + + D+ G I+ D+F
Sbjct: 107 HDI--LIRKFDRQGRGQIAFDDF 127
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 24/149 (16%)
Query: 54 IDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLE-EHDKLVEEIFQHEDKDKNGF 112
+D+D K+L + KK + GS E+ + E + + LV+ + D D NG
Sbjct: 1 MDADEIKRLGKR-----FKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGE 55
Query: 113 ISHDEF---------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE 163
+ EF G K +L F+ D D D +S E+ + LK MV +
Sbjct: 56 VDFKEFIEGVSQFSVKGDKEQKLRFA--FRIYDMDKDGYISNGELFQVLK-MMVGNNLKD 112
Query: 164 ------VEEIFQHEDKDKNGFISHDEFSG 186
V++ + DKD +G IS +EF
Sbjct: 113 TQLQQIVDKTIINADKDGDGRISFEEFCA 141
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 24/147 (16%)
Query: 43 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 102
DQ NVF+ +D D +S E+ + L S G + V I
Sbjct: 24 DQSFLWNVFQRVDKDRSGVISDNELQQAL---------SNGT-----WTPFNPVTVRSII 69
Query: 103 QHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS 162
D++ ++ EF+G NVF+ D D + + E+ KQ ++ G
Sbjct: 70 SMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNEL-----KQALSGFGY 124
Query: 163 EVEEIF-----QHEDKDKNGFISHDEF 184
+ + F + D+ G I+ D+F
Sbjct: 125 RLSDQFHDILIRKFDRQGRGQIAFDDF 151
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 141 KQLSREEVSEYLKKQ--MVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K+L+ EE+ Y K Q ++ G + +I DKD+NG IS DE+
Sbjct: 89 KRLASEELKRYSKNQITLIRLWGDALFDII---DKDQNGAISLDEW 131
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 98 VEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
++E F+ DKD NGFIS E G K + + + +E D D D Q++ EE +
Sbjct: 82 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 141
Query: 152 L 152
+
Sbjct: 142 M 142
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 27/88 (30%)
Query: 98 VEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMV 157
V+++F DKDK+GFI DE L ++ K SDA LS +E K ++
Sbjct: 43 VKKVFHILDKDKSGFIEEDE----------LGSILKGFSSDA-ADLSAKET-----KTLM 86
Query: 158 AAEGSEVEEIFQHEDKDKNGFISHDEFS 185
AA DKD +G I +EFS
Sbjct: 87 AA-----------GDKDGDGKIGVEEFS 103
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 24/148 (16%)
Query: 42 GDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEI 101
DQ NVF+ +D D +S E+ + L S G + V I
Sbjct: 1 ADQSFLWNVFQRVDKDRSGVISDTELQQAL---------SNGT-----WTPFNPVTVRSI 46
Query: 102 FQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEG 161
D++ ++ EF+G NVF+ D D + + E+ KQ ++ G
Sbjct: 47 ISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNEL-----KQALSGFG 101
Query: 162 SEVEEIF-----QHEDKDKNGFISHDEF 184
+ + F + D+ G I+ D+F
Sbjct: 102 YRLSDQFHDILIRKFDRQGRGQIAFDDF 129
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 54 IDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLE-EHDKLVEEIFQHEDKDKNGF 112
D+D K+L + KK + GS E+ + E + + LV+ + D D NG
Sbjct: 14 FDADEIKRLGKR-----FKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGE 68
Query: 113 ISHDEF-------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE-- 163
+ EF S E L F+ D D D +S E+ + LK MV +
Sbjct: 69 VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLK-MMVGNNLKDTQ 127
Query: 164 ----VEEIFQHEDKDKNGFISHDEFSG 186
V++ + DKD +G IS +EF
Sbjct: 128 LQQIVDKTIINADKDGDGRISFEEFCA 154
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 106 DKDKNGFISHDEFSG-------PKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVA 158
D+D NG + EF G +E + F+ D D + +S E+ + +
Sbjct: 56 DRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEK 115
Query: 159 AEGSEVEEIFQHEDKDKNGFISHDEF 184
EV+E+ + D D +G ++++EF
Sbjct: 116 LSDEEVDEMIRAADTDGDGQVNYEEF 141
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 24/149 (16%)
Query: 54 IDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLE-EHDKLVEEIFQHEDKDKNGF 112
D+D K+L + KK + GS E+ + E + + LV+ + D D NG
Sbjct: 15 FDADEIKRLGKR-----FKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGE 69
Query: 113 ISHDEF---------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE 163
+ EF G K +L F+ D D D +S E+ + LK MV +
Sbjct: 70 VDFKEFIEGVSQFSVKGDKEQKLRFA--FRIYDMDKDGYISNGELFQVLK-MMVGNNLKD 126
Query: 164 ------VEEIFQHEDKDKNGFISHDEFSG 186
V++ + DKD +G IS +EF
Sbjct: 127 TQLQQIVDKTIINADKDGDGRISFEEFCA 155
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 24/147 (16%)
Query: 43 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 102
DQ NVF+ +D D +S E+ + L + M
Sbjct: 1 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMF----------- 49
Query: 103 QHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS 162
D++ ++ EF+G NVF+ D D + + E+ KQ ++ G
Sbjct: 50 ---DRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNEL-----KQALSGFGY 101
Query: 163 EVEEIF-----QHEDKDKNGFISHDEF 184
+ + F + D+ G I+ D+F
Sbjct: 102 RLSDQFHDILIRKFDRQGRGQIAFDDF 128
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 24/147 (16%)
Query: 43 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIF 102
DQ NVF+ +D D +S E+ + L S G + V I
Sbjct: 23 DQSFLWNVFQRVDKDRSGVISDTELQQAL---------SNGT-----WTPFNPVTVRSII 68
Query: 103 QHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS 162
D++ ++ EF+G NVF+ D D + + E+ KQ ++ G
Sbjct: 69 SMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNEL-----KQALSGFGY 123
Query: 163 EVEEIF-----QHEDKDKNGFISHDEF 184
+ + F + D+ G I+ D+F
Sbjct: 124 RLSDQFHDILIRKFDRQGRGQIAFDDF 150
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 87 VKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDAD 140
+ + EE ++ F DK+ G I+ E G E L ++ E +++ +
Sbjct: 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNN 60
Query: 141 KQLSREEVSEYLKKQMVAAEGSE-VEEIFQHEDKDKNGFISHDEF 184
QL+ E + KQM + E + E F+ D+D +GFIS E
Sbjct: 61 GQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAEL 105
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 98 VEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
+ E F+ DKD NG+IS E G K + + + +E D D D Q++ EE +
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Query: 152 L 152
+
Sbjct: 143 M 143
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 22/104 (21%)
Query: 101 IFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYL 152
+F D D NG I ++F G H++L F D + D +++EE+ +
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKW--AFNLYDINKDGCITKEEMLAIM 191
Query: 153 KK--QMVA----------AEGSEVEEIFQHEDKDKNGFISHDEF 184
K M+ A VE FQ D++++G ++ DEF
Sbjct: 192 KSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEF 235
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 98 VEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
+ E F+ DKD NG+IS E G K + + + +E D D D Q++ EE +
Sbjct: 81 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 140
Query: 152 L 152
+
Sbjct: 141 M 141
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQ 142
++ EE +E F DKD NG IS E + G E + ++ EID D + Q
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 143 LSREEVSEYLKKQM 156
+ E + +Q+
Sbjct: 63 IEFSEFLALMSRQL 76
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 24/148 (16%)
Query: 55 DSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLE-EHDKLVEEIFQHEDKDKNGFI 113
D+D K+L + KK + GS E+ + E + + LV+ + D D NG +
Sbjct: 1 DADEIKRLGKR-----FKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEV 55
Query: 114 SHDEF---------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE- 163
EF G K +L F+ D D D +S E+ + LK MV +
Sbjct: 56 DFKEFIEGVSQFSVKGDKEQKLRFA--FRIYDMDKDGYISNGELFQVLK-MMVGNNLKDT 112
Query: 164 -----VEEIFQHEDKDKNGFISHDEFSG 186
V++ + DKD +G IS +EF
Sbjct: 113 QLQQIVDKTIINADKDGDGRISFEEFCA 140
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 98 VEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
+ E F+ DKD NG+IS E G K + + + +E D D D Q++ EE +
Sbjct: 82 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 141
Query: 152 L 152
+
Sbjct: 142 M 142
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
VF D D ++ +E Y + ++ + E+ FQH D D +G + DE +
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMT 172
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 98 VEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
+ E F+ DKD NG+IS E G K + + + +E D D D Q++ EE +
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
Query: 152 L 152
+
Sbjct: 64 M 64
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 98 VEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
+ E F+ DKD NG+IS E G K + + + +E D D D Q++ EE +
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
Query: 152 L 152
+
Sbjct: 67 M 67
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.311 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,967,944
Number of Sequences: 62578
Number of extensions: 492290
Number of successful extensions: 2513
Number of sequences better than 100.0: 275
Number of HSP's better than 100.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 1449
Number of HSP's gapped (non-prelim): 876
length of query: 344
length of database: 14,973,337
effective HSP length: 100
effective length of query: 244
effective length of database: 8,715,537
effective search space: 2126591028
effective search space used: 2126591028
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 52 (24.6 bits)