RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10590
(344 letters)
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase,
polymorphism, rotamase, structural genomics, structural
genomics consortium, SGC; 1.80A {Homo sapiens}
Length = 102
Score = 138 bits (349), Expect = 5e-41
Identities = 49/74 (66%), Positives = 54/74 (72%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G + D ++QPF F+LG GQVIKGWDQGL MC GEKRKL IP L YG+RGA IP
Sbjct: 23 GTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIP 82
Query: 246 GGATLTFEVELLSI 259
GGATL FEVELL I
Sbjct: 83 GGATLVFEVELLKI 96
Score = 86.4 bits (215), Expect = 2e-21
Identities = 30/41 (73%), Positives = 31/41 (75%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
MC GEKRKL IP L YG+RGA IPGGATL FEVELL I
Sbjct: 56 MCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI 96
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae}
SCOP: d.26.1.1
Length = 113
Score = 134 bits (339), Expect = 3e-39
Identities = 40/74 (54%), Positives = 49/74 (66%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR PF +GVGQVIKGWD G+ ++ VGEK +LTIP AYG RG +IP
Sbjct: 39 GQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIP 98
Query: 246 GGATLTFEVELLSI 259
+TL F+VELL +
Sbjct: 99 PNSTLVFDVELLKV 112
Score = 83.8 bits (208), Expect = 3e-20
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
+ VGEK +LTIP AYG RG +IP +TL F+VELL +
Sbjct: 72 LSVGEKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112
>2ppn_A FK506-binding protein 1A; high resolution protein structure,
isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB:
1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A*
1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A*
1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Length = 107
Score = 133 bits (337), Expect = 3e-39
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR++PF F LG +VI+GW++G+ +M VG++ KLTI P AYG G +IP
Sbjct: 33 GKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIP 92
Query: 246 GGATLTFEVELLSI 259
ATL F+VELL +
Sbjct: 93 PHATLVFDVELLKL 106
Score = 83.4 bits (207), Expect = 4e-20
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG++ KLTI P AYG G +IP ATL F+VELL +
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5;
2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A*
3ni6_A 3pa7_A
Length = 129
Score = 133 bits (336), Expect = 1e-38
Identities = 34/75 (45%), Positives = 42/75 (56%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G D DR+ PF F L G+VIKGWD ++ M EK + I YGD G G I
Sbjct: 51 TGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGESI 110
Query: 245 PGGATLTFEVELLSI 259
PG + L FE+ELLS
Sbjct: 111 PGNSVLLFEIELLSF 125
Score = 83.1 bits (206), Expect = 7e-20
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M EK + I YGD G G IPG + L FE+ELLS
Sbjct: 85 MRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSF 125
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET:
SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A
2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Length = 133
Score = 133 bits (336), Expect = 1e-38
Identities = 46/74 (62%), Positives = 51/74 (68%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG RGAG VIP
Sbjct: 60 GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIP 119
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 120 PNATLVFEVELLDV 133
Score = 84.2 bits (209), Expect = 3e-20
Identities = 28/41 (68%), Positives = 30/41 (73%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG RGAG VIP ATL FEVELL +
Sbjct: 93 MKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura
genomics, seattle structural genomics center for
infectious; NMR {Giardia lamblia}
Length = 130
Score = 132 bits (334), Expect = 2e-38
Identities = 43/74 (58%), Positives = 51/74 (68%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G + D R +PF FTLG G+VIKGWDQG+ M +GEK TIP LAYG+RG VIP
Sbjct: 57 GKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPPVIP 116
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL++
Sbjct: 117 PKATLVFEVELLAV 130
Score = 83.1 bits (206), Expect = 1e-19
Identities = 25/41 (60%), Positives = 29/41 (70%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M +GEK TIP LAYG+RG VIP ATL FEVELL++
Sbjct: 90 MTLGEKALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain,
HSP90 cochaperone, immunophiline, PEP prolyl isomerase;
0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A
3o5r_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Length = 128
Score = 131 bits (332), Expect = 3e-38
Identities = 38/74 (51%), Positives = 44/74 (59%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D HDR++PF F+LG GQVIK WD G+ M GE L P AYG G+ IP
Sbjct: 52 GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIP 111
Query: 246 GGATLTFEVELLSI 259
ATL FE+ELL
Sbjct: 112 SNATLFFEIELLDF 125
Score = 82.3 bits (204), Expect = 2e-19
Identities = 19/41 (46%), Positives = 21/41 (51%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M GE L P AYG G+ IP ATL FE+ELL
Sbjct: 85 MKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 125
>1r9h_A FKB-6, FK506 binding protein family; structural genomics,
peptidylprolyl isomerase, PSI, protein structure
initiative; 1.80A {Caenorhabditis elegans} SCOP:
d.26.1.1
Length = 135
Score = 132 bits (333), Expect = 4e-38
Identities = 42/97 (43%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR F+F LG G VIKGWD G+ M GE + TI YGD G+ IP
Sbjct: 47 GTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIP 106
Query: 246 GGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSR 282
GGATL FEVEL ++I D D + R
Sbjct: 107 GGATLIFEVELFEWSA--------EDISPDRDGTILR 135
Score = 82.7 bits (205), Expect = 1e-19
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADK 60
M GE + TI YGD G+ IPGGATL FEVEL ++I D D
Sbjct: 80 MTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSA--------EDISPDRDG 131
Query: 61 QLSR 64
+ R
Sbjct: 132 TILR 135
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics,
structural genomics consortium, SGC, PE prolyl CIS-trans
isomerase; 1.82A {Homo sapiens}
Length = 125
Score = 130 bits (330), Expect = 7e-38
Identities = 40/67 (59%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 193 HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTF 252
H+ QP FTLG+ + +KGWDQGL MCVGEKRKL IPPAL YG G G IP +TL F
Sbjct: 56 HNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGKGK-IPPESTLIF 114
Query: 253 EVELLSI 259
++LL I
Sbjct: 115 NIDLLEI 121
Score = 83.1 bits (206), Expect = 7e-20
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
MCVGEKRKL IPPAL YG G G IP +TL F ++LL I
Sbjct: 82 MCVGEKRKLIIPPALGYGKEGKGK-IPPESTLIFNIDLLEI 121
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat,
williams-beuren syndrome, structural genomics
consortium, SGC; 2.10A {Homo sapiens}
Length = 134
Score = 128 bits (325), Expect = 5e-37
Identities = 25/77 (32%), Positives = 32/77 (41%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
D + R P LG + G + GL M GE + P AYG G +I
Sbjct: 58 MDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPPLI 117
Query: 245 PGGATLTFEVELLSIGD 261
P T+ FE+ELL D
Sbjct: 118 PPNTTVLFEIELLDFLD 134
Score = 81.5 bits (202), Expect = 3e-19
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGD 43
M GE + P AYG G +IP T+ FE+ELL D
Sbjct: 92 MRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFLD 134
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain,
HSP90 cochaperone, immunophiline, PEP prolyl isomerase;
1.60A {Homo sapiens} PDB: 3o5f_A
Length = 144
Score = 128 bits (323), Expect = 1e-36
Identities = 38/74 (51%), Positives = 44/74 (59%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D HDR++PF F+LG GQVIK WD G+ M GE L P AYG G+ IP
Sbjct: 68 GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIP 127
Query: 246 GGATLTFEVELLSI 259
ATL FE+ELL
Sbjct: 128 SNATLFFEIELLDF 141
Score = 80.1 bits (198), Expect = 2e-18
Identities = 19/41 (46%), Positives = 21/41 (51%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M GE L P AYG G+ IP ATL FE+ELL
Sbjct: 101 MKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 141
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus,
phosphoprotein, R isomerase-inhibitor complex; HET: RAP;
1.95A {Mus musculus} PDB: 1pbk_A*
Length = 119
Score = 124 bits (314), Expect = 1e-35
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG-AGNV 243
+ + +P +F +GVG+VI+GWD+ L M GEK +L I P AYG +G
Sbjct: 43 NIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAK 102
Query: 244 IPGGATLTFEVELLSI 259
IP L FEVEL+ I
Sbjct: 103 IPPNTKLIFEVELVDI 118
Score = 74.6 bits (184), Expect = 8e-17
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRG-AGNVIPGGATLTFEVELLSI 41
M GEK +L I P AYG +G IP L FEVEL+ I
Sbjct: 77 MSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor,
SHH signalling antagonist, structural genomics
consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Length = 118
Score = 124 bits (313), Expect = 2e-35
Identities = 23/68 (33%), Positives = 29/68 (42%)
Query: 194 DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFE 253
+ FTLG VI+ D + M VGE +T YG +G IP A L E
Sbjct: 51 QEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLE 110
Query: 254 VELLSIGD 261
V L + D
Sbjct: 111 VTLKTAVD 118
Score = 80.0 bits (198), Expect = 9e-19
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGD 43
M VGE +T YG +G IP A L EV L + D
Sbjct: 76 MDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAVD 118
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase;
ssgcid, seattle structural genomics center for in
disease; HET: FK5; 1.50A {Burkholderia pseudomallei}
PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A*
1euv_B 3v60_A 3v61_A 3v62_A*
Length = 209
Score = 126 bits (317), Expect = 5e-35
Identities = 45/74 (60%), Positives = 50/74 (67%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR+ PF F LG G VIKGWD+G+ M VG R+LTIPP L YG RGA VIP
Sbjct: 136 GQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIP 195
Query: 246 GGATLTFEVELLSI 259
ATL FEVELL +
Sbjct: 196 PNATLVFEVELLDV 209
Score = 79.9 bits (197), Expect = 9e-18
Identities = 27/41 (65%), Positives = 29/41 (70%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M VG R+LTIPP L YG RGA VIP ATL FEVELL +
Sbjct: 169 MKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506
binding protein; 1.85A {Arabidopsis thaliana} SCOP:
d.26.1.1 PDB: 1y0o_A
Length = 129
Score = 122 bits (309), Expect = 8e-35
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 11/85 (12%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLT------EMCVGEKRKLTIPPALAYGDRG 239
G D ++R +P TF +GVG+VIKGWDQG+ M G KR L IPP LAYGDRG
Sbjct: 44 GKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRG 103
Query: 240 AG-----NVIPGGATLTFEVELLSI 259
AG +IP + L F++E +
Sbjct: 104 AGCKGGSCLIPPASVLLFDIEYIGK 128
Score = 78.2 bits (193), Expect = 5e-18
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAG-----NVIPGGATLTFEVELLSI 41
M G KR L IPP LAYGDRGAG +IP + L F++E +
Sbjct: 83 MLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain
five-stranded anti-parallel beta-sheet alpha-helix
crossing THis sheet; 2.08A {Triticum aestivum} PDB:
3jym_A
Length = 356
Score = 126 bits (318), Expect = 1e-33
Identities = 43/74 (58%), Positives = 47/74 (63%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DRD F F LG GQVIKGWDQG+ M GE TIPP LAYG+ G+ IP
Sbjct: 44 GKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIP 103
Query: 246 GGATLTFEVELLSI 259
ATL F+VELLS
Sbjct: 104 ANATLQFDVELLSW 117
Score = 117 bits (296), Expect = 2e-30
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 190 DELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGN--VIPGG 247
+ HD +PF F VI+G D+ + M GE +TIPP AYG + ++P
Sbjct: 282 KKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPN 341
Query: 248 ATLTFEVELLSI 259
+T+ +EVEL+S
Sbjct: 342 STVIYEVELVSF 353
Score = 103 bits (259), Expect = 3e-25
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 194 DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRG-----AGNVIPGGA 248
+ + FT+ G + + + M GEK L + P +G+ G G +P A
Sbjct: 164 SKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNA 223
Query: 249 TLTFEVELLSIGDQVTTTN 267
+L ++EL+S +
Sbjct: 224 SLVIDLELVSWKTVTEIGD 242
Score = 78.3 bits (193), Expect = 2e-16
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M GE TIPP LAYG+ G+ IP ATL F+VELLS
Sbjct: 77 MKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSW 117
Score = 73.3 bits (180), Expect = 1e-14
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGN--VIPGGATLTFEVELLSI 41
M GE +TIPP AYG + ++P +T+ +EVEL+S
Sbjct: 311 MKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSF 353
Score = 66.8 bits (163), Expect = 2e-12
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 1 MCVGEKRKLTIPPALAYGDRG-----AGNVIPGGATLTFEVELLSIGDQVTTTN 49
M GEK L + P +G+ G G +P A+L ++EL+S +
Sbjct: 189 MKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGD 242
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein,
phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP:
d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Length = 280
Score = 121 bits (304), Expect = 2e-32
Identities = 37/94 (39%), Positives = 44/94 (46%)
Query: 186 GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIP 245
G K D DR F+F LG G+VIK WD + M VGE +T P AYG G+ IP
Sbjct: 84 GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIP 143
Query: 246 GGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQ 279
ATL FEVEL + T I +
Sbjct: 144 PNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTR 177
Score = 98.0 bits (244), Expect = 9e-24
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 198 PFTFTLGVGQVIK---GWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV-IPGGATLTFE 253
F +G G+ + G ++ + M GE + + P+ A+G G IP A L +E
Sbjct: 207 ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYE 266
Query: 254 VELLSI 259
+ L S
Sbjct: 267 LHLKSF 272
Score = 74.5 bits (183), Expect = 2e-15
Identities = 22/61 (36%), Positives = 26/61 (42%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADK 60
M VGE +T P AYG G+ IP ATL FEVEL + T I
Sbjct: 117 MKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQT 176
Query: 61 Q 61
+
Sbjct: 177 R 177
Score = 71.8 bits (176), Expect = 2e-14
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNV-IPGGATLTFEVELLSI 41
M GE + + P+ A+G G IP A L +E+ L S
Sbjct: 231 MEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSF 272
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 135
Score = 114 bits (288), Expect = 1e-31
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 194 DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGN-VIPGGATLTF 252
+ FTLG VI+ D + M VGE +T YG +G+ + IP A L
Sbjct: 55 QEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCL 114
Query: 253 EVELLSIGD 261
EV L + D
Sbjct: 115 EVTLKTAVD 123
Score = 71.2 bits (175), Expect = 2e-15
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGN-VIPGGATLTFEVELLSIGD 43
M VGE +T YG +G+ + IP A L EV L + D
Sbjct: 80 MDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVD 123
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel,
central helix, with flexible N-terminal extension,
isomerase; NMR {Homo sapiens}
Length = 157
Score = 113 bits (284), Expect = 8e-31
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 194 DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA-GNVIPGGATLTF 252
+ FTLG VI+ D + M VGE +T YG +G+ IP A L
Sbjct: 81 QEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCL 140
Query: 253 EVELLSIGD 261
EV L + D
Sbjct: 141 EVTLKTAVD 149
Score = 71.0 bits (174), Expect = 4e-15
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRGA-GNVIPGGATLTFEVELLSIGD 43
M VGE +T YG +G+ IP A L EV L + D
Sbjct: 106 MDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVD 149
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase,
isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Length = 167
Score = 106 bits (267), Expect = 4e-28
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 194 DRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFE 253
+R +P TF +VIKGW + L M G++ +L IP LAYG G G +IP + L F+
Sbjct: 78 ERGKPTTF--RPNEVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGGMIPPYSPLEFD 135
Query: 254 VELLSIGDQVTTTNVFKEIDSDADKQLSREE 284
VEL+SI D +E+D K E
Sbjct: 136 VELISIKDGGKGRTA-EEVDEILRKAEEDRE 165
Score = 74.0 bits (182), Expect = 4e-16
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADK 60
M G++ +L IP LAYG G G +IP + L F+VEL+SI D +E+D K
Sbjct: 101 MREGDRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGGKGRTA-EEVDEILRK 159
Query: 61 QLSREE 66
E
Sbjct: 160 AEEDRE 165
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A
{Arabidopsis thaliana}
Length = 180
Score = 106 bits (267), Expect = 5e-28
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 12/95 (12%)
Query: 193 HDRDQPFTFTLGV-GQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV--IPGGAT 249
QP LG + + G G+ M GE+ + + LAYG G + +P A
Sbjct: 89 WHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMAD 148
Query: 250 LTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREE 284
L +EVE++ + + A ++ EE
Sbjct: 149 LLYEVEVIGFD---------ETKEGKARSDMTVEE 174
Score = 68.3 bits (167), Expect = 5e-14
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNV--IPGGATLTFEVELLSIGDQVTTTNVFKEIDSDA 58
M GE+ + + LAYG G + +P A L +EVE++ + + A
Sbjct: 116 MKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFD---------ETKEGKA 166
Query: 59 DKQLSREE 66
++ EE
Sbjct: 167 RSDMTVEE 174
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain,
long alpha helix, dimerisation VIA helical INTE
isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1
PDB: 2uz5_A 2vcd_A*
Length = 213
Score = 102 bits (255), Expect = 7e-26
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 190 DELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGAT 249
D +P TF V QVI GW + L M G ++ +P LAYG R G I T
Sbjct: 142 DSTEKTGKPATF--QVSQVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPNET 199
Query: 250 LTFEVELLSI 259
L F++ L+S+
Sbjct: 200 LIFKIHLISV 209
Score = 70.9 bits (174), Expect = 1e-14
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
M G ++ +P LAYG R G I TL F++ L+S+
Sbjct: 169 MPAGSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISV 209
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR
SRT; 1.60A {Pseudomonas syringae PV}
Length = 219
Score = 98.6 bits (246), Expect = 1e-24
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 197 QPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVEL 256
QP F + VI GW L M G K +L IP AYG GAG++I L FE+EL
Sbjct: 157 QPQWF--RLDSVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIEL 214
Query: 257 LSIG 260
+++
Sbjct: 215 IAVS 218
Score = 71.3 bits (175), Expect = 9e-15
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIG 42
M G K +L IP AYG GAG++I L FE+EL+++
Sbjct: 177 MPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone,
peptidyl-prolyl isomerase, heat shock protein, FK
family; HET: MSE; 1.97A {Escherichia coli} SCOP:
d.26.1.1 PDB: 1q6i_A* 1q6u_A
Length = 224
Score = 94.4 bits (235), Expect = 5e-23
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 190 DELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGAT 249
D + R +P +F + VI GW +GL + G K KL IPP LAYG G IP +T
Sbjct: 157 DNSYTRGEPLSF--RLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPG-IPPNST 213
Query: 250 LTFEVELLSI 259
L F+VELL +
Sbjct: 214 LVFDVELLDV 223
Score = 64.8 bits (158), Expect = 2e-12
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSI 41
+ G K KL IPP LAYG G IP +TL F+VELL +
Sbjct: 184 IKKGGKIKLVIPPELAYGKAGVPG-IPPNSTLVFDVELLDV 223
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR
repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1
d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Length = 457
Score = 91.7 bits (227), Expect = 1e-20
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 185 SGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
+G K D HDR++PF F+LG GQVIK WD G+ M GE L P AYG G+ I
Sbjct: 63 NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGSLPKI 122
Query: 245 PGGATLTFEVELLSIGDQVTTTNVFKEIDSD 275
P ATL FE+ELL + + +
Sbjct: 123 PSNATLFFEIELLDFKGEDLFEDGGIIRRTK 153
Score = 73.6 bits (180), Expect = 1e-14
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Query: 196 DQPFTFTLGVGQ---VIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV-IPGGATLT 251
+ FT+G G+ + G D+ L +M E+ L + P +G+ G I A L
Sbjct: 183 CRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELI 242
Query: 252 FEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQ 292
+EV L S + + + + + +E+ + Y K
Sbjct: 243 YEVTLKSFEKAKESWEMDTKEKLEQAAIV-KEKGTVYFKGG 282
Score = 51.2 bits (122), Expect = 2e-07
Identities = 19/57 (33%), Positives = 24/57 (42%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSD 57
M GE L P AYG G+ IP ATL FE+ELL + + +
Sbjct: 97 MKRGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTK 153
Score = 48.9 bits (116), Expect = 1e-06
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNV-IPGGATLTFEVELLSIGDQVTTTNVFKEIDSDAD 59
M E+ L + P +G+ G I A L +EV L S + + + +
Sbjct: 209 MQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQA 268
Query: 60 KQLSREEVSEYLKKQ 74
+ +E+ + Y K
Sbjct: 269 AIV-KEKGTVYFKGG 282
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 78.6 bits (194), Expect = 3e-16
Identities = 32/162 (19%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 30 ATLTFEVELLSIGDQVTT-TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVK 88
A L + L+ D+ T +F+++D++ D L R+E+ + + +G + ++
Sbjct: 315 AALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHE-FMRLKGVDSNSLIQ 373
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPK-HDELGLPNVFKEIDSDADKQ 142
+ + ++ + D D +G I + EF + FK D D +
Sbjct: 374 NEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGK 433
Query: 143 LSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+S +E+ + + + + E+E I + D +K+G + +EF
Sbjct: 434 ISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEF 475
Score = 47.8 bits (114), Expect = 3e-06
Identities = 18/90 (20%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 248 ATLTFEVELLSIGDQVTT-TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVK 306
A L + L+ D+ T +F+++D++ D L R+E+ + + +G + ++
Sbjct: 315 AALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHE-FMRLKGVDSNSLIQ 373
Query: 307 HMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ + ++ + D D +G I + EF
Sbjct: 374 NEGSTIEDQIDSLMPLLDMDGSGSIEYSEF 403
Score = 38.1 bits (89), Expect = 0.003
Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 41/195 (21%)
Query: 152 LKK---QMVAAEGSEVEEI------FQHEDKDKNGFISHDEF-SGPKHDELHDRDQPFTF 201
L + +A++ + ++E F+ D + +G + DE G +
Sbjct: 312 LAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSL 371
Query: 202 TLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGD 261
G I+ + L + D I + ++ +
Sbjct: 372 IQNEGSTIED-----------QIDSL-----MPLLDMDGSGSIEYSEFIASAIDRTILLS 415
Query: 262 QVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQ 321
+ FK D D ++S +E L K A+ S E+++ ++E+ D
Sbjct: 416 RERMERAFKMFDKDGSGKISTKE----LFKLFSQADSSIQMEELESIIEQVDN------- 464
Query: 322 HEDKDKNGFISHDEF 336
+K+G + +EF
Sbjct: 465 ----NKDGEVDFNEF 475
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 72.5 bits (178), Expect = 2e-15
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 16/149 (10%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F D D + L R + + + A GA +V+ + L + + +
Sbjct: 12 RFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGS 71
Query: 110 NGFISHDEF--------------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQ 155
+G ++ ++F S + + + D +AD Q++ +E + +L
Sbjct: 72 DGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA- 130
Query: 156 MVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ +E E F D + NG +S DE
Sbjct: 131 -LGMSKAEAAEAFNQVDTNGNGELSLDEL 158
Score = 53.6 bits (129), Expect = 8e-09
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 17/120 (14%)
Query: 35 EVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEH 94
EV+ L + KE +D L+ E+ + + + + ++
Sbjct: 48 EVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVV--- 104
Query: 95 DKLVEEIFQHEDKDKNGFISHDEFSGPKH--DELGLPN-----VFKEIDSDADKQLSREE 147
+ I DK+ +G I+ DEF LG+ F ++D++ + +LS +E
Sbjct: 105 ----KGIVGMCDKNADGQINADEF---AAWLTALGMSKAEAAEAFNQVDTNGNGELSLDE 157
Score = 50.5 bits (121), Expect = 8e-08
Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 30/122 (24%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF---------------SGPKHDEL------GLPN 130
D+L ++ F D D NG + +F + L
Sbjct: 4 IASDRL-KKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDY 62
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMV--------AAEGSEVEEIFQHEDKDKNGFISHD 182
+ KE +D L+ E+ + + G V+ I DK+ +G I+ D
Sbjct: 63 LAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINAD 122
Query: 183 EF 184
EF
Sbjct: 123 EF 124
Score = 46.3 bits (110), Expect = 3e-06
Identities = 12/69 (17%), Positives = 27/69 (39%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
F D D + L R + + + A GA +V+ + L + + +
Sbjct: 12 RFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGS 71
Query: 328 NGFISHDEF 336
+G ++ ++F
Sbjct: 72 DGSLTEEQF 80
Score = 44.4 bits (105), Expect = 1e-05
Identities = 22/175 (12%), Positives = 46/175 (26%), Gaps = 57/175 (32%)
Query: 162 SEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCV 221
+++ F D D NG + +F + + + +
Sbjct: 7 DRLKKRFDRWDFDGNGALERADF-----------------EKEAQHIAEAFGKDAGAA-- 47
Query: 222 GEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLS 281
EV+ L + KE +D L+
Sbjct: 48 -------------------------------EVQTLKNAFGGLFDYLAKEAGVGSDGSLT 76
Query: 282 REEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
E+ + + + + +++ I DK+ +G I+ DEF
Sbjct: 77 EEQFIRVTENLIFEQGEASFNRVLGPVVKG-------IVGMCDKNADGQINADEF 124
Score = 28.6 bits (64), Expect = 2.1
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 310 EEHDKLVEEIFQHEDKDKNGFISHDEFS 337
D+L ++ F D D NG + +F
Sbjct: 4 IASDRL-KKRFDRWDFDGNGALERADFE 30
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 75.1 bits (185), Expect = 3e-15
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 13/162 (8%)
Query: 30 ATLTFEVELLSIGDQVTT-TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVK 88
A L + L+ D+ T +F ++D + D QL R E+ E K+ M D
Sbjct: 319 AALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 378
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPK-HDELGLPNVFKEIDSDADKQ 142
+ E V+++ D DKNG+I + EF L F+ DSD +
Sbjct: 379 AVEHE----VDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGK 434
Query: 143 LSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+S E++ V +E + + DK+ +G + DEF
Sbjct: 435 ISSTELATIFGVSDVDSE--TWKSVLSEVDKNNDGEVDFDEF 474
Score = 47.4 bits (113), Expect = 4e-06
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 248 ATLTFEVELLSIGDQVTT-TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVK 306
A L + L+ D+ T +F ++D + D QL R E+ E K+ M D
Sbjct: 319 AALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDAS 378
Query: 307 HMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ E V+++ D DKNG+I + EF
Sbjct: 379 AVEHE----VDQVLDAVDFDKNGYIEYSEF 404
Score = 35.4 bits (82), Expect = 0.026
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 17/69 (24%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
F+ DSD ++S E++ V + + + DK+
Sbjct: 423 AFRMFDSDNSGKISSTELATIFGVSDVD-----------------SETWKSVLSEVDKNN 465
Query: 328 NGFISHDEF 336
+G + DEF
Sbjct: 466 DGEVDFDEF 474
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 71.4 bits (175), Expect = 6e-15
Identities = 17/151 (11%), Positives = 48/151 (31%), Gaps = 18/151 (11%)
Query: 50 VFKEI-DSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
VF D + D + ++ +KK + + + + ++ D++
Sbjct: 17 VFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADEN 76
Query: 109 KNGFISHDEF---------------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLK 153
++ ++ +E+ S P+ + +F D+ D + + E S
Sbjct: 77 EDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYM 136
Query: 154 KQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ + + F ++ + F
Sbjct: 137 SYGIPKS--DCDAAFDTLSDGGKTMVTREIF 165
Score = 51.0 bits (122), Expect = 7e-08
Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 14/109 (12%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
K D + D+Q+++EE + + + + E E + E K + +F D +
Sbjct: 70 RKYADENEDEQVTKEEWLKMWAECVKSVEKGE------SLPEWLTKYMNFMFDVNDTSGD 123
Query: 111 GFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEYLK 153
I E+S G + F + ++RE +
Sbjct: 124 NIIDKHEYSTVYMSYGIPKSDCD--AAFDTLSDGGKTMVTREIFARLWT 170
Score = 42.9 bits (101), Expect = 4e-05
Identities = 8/70 (11%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 268 VFKEI-DSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 326
VF D + D + ++ +KK + + + + ++ D++
Sbjct: 17 VFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADEN 76
Query: 327 KNGFISHDEF 336
++ ++ +E+
Sbjct: 77 EDEQVTKEEW 86
Score = 41.0 bits (96), Expect = 2e-04
Identities = 11/107 (10%), Positives = 36/107 (33%), Gaps = 15/107 (14%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
+ +K++ D + +G I D+F E+ L
Sbjct: 9 FQRNKILRVFNTFYDCNHDGVIEWDDF---------------ELAIKKICNLHSWPTDGK 53
Query: 152 LKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQP 198
+ A + + ++ D++++ ++ +E+ + + ++
Sbjct: 54 KHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKG 100
Score = 40.2 bits (94), Expect = 3e-04
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
K D + D+Q+++EE + + + + E E + E K + +F D +
Sbjct: 70 RKYADENEDEQVTKEEWLKMWAECVKSVEKGE------SLPEWLTKYMNFMFDVNDTSGD 123
Query: 329 GFISHDEF 336
I E+
Sbjct: 124 NIIDKHEY 131
Score = 38.7 bits (90), Expect = 0.001
Identities = 21/198 (10%), Positives = 52/198 (26%), Gaps = 37/198 (18%)
Query: 143 LSREEVSEYLKKQMVAAEGSEVEEIF-QHEDKDKNGFISHDEFSGPKH---DELHDRDQP 198
++ ++S++ + ++ +F D + +G I D+F +
Sbjct: 1 MAAHQLSDFQRN--------KILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDG 52
Query: 199 FTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLS 258
+ WD E ++T L +V G + + + ++
Sbjct: 53 KKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMN 112
Query: 259 IGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEE 318
+F D+ D + + E S +
Sbjct: 113 F--------MFDVNDTSGDNIIDKHEYSTVYMS-----------------YGIPKSDCDA 147
Query: 319 IFQHEDKDKNGFISHDEF 336
F ++ + F
Sbjct: 148 AFDTLSDGGKTMVTREIF 165
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 70.5 bits (173), Expect = 8e-15
Identities = 22/148 (14%), Positives = 48/148 (32%), Gaps = 15/148 (10%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F D D + + R + S K + + ++ + + + L + + D+D
Sbjct: 9 RFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDG 68
Query: 110 NGFISHDEF-------------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQM 156
+ I+ +EF + L D+D D ++ + + L
Sbjct: 69 DQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG 128
Query: 157 VAAEGSEVEEIFQHEDKDKNGFISHDEF 184
V + + D D +G + E
Sbjct: 129 VPED--LARQAAAALDTDGDGKVGETEI 154
Score = 48.6 bits (116), Expect = 3e-07
Identities = 19/120 (15%), Positives = 38/120 (31%), Gaps = 28/120 (23%)
Query: 93 EHDKLVEEIFQHEDKDKNGFISHDEF---------------SGPKHDEL------GLPNV 131
E+++ + F D+D NG I +F + L +
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60
Query: 132 FKEIDSDADKQLSREEVSEYLKKQMV-------AAEGSEVEEIFQHEDKDKNGFISHDEF 184
D D D++++REE K++ + D D +G ++ +
Sbjct: 61 AGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120
Score = 43.6 bits (103), Expect = 2e-05
Identities = 12/69 (17%), Positives = 28/69 (40%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
F D D + + R + S K + + ++ + + + L + + D+D
Sbjct: 9 RFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDG 68
Query: 328 NGFISHDEF 336
+ I+ +EF
Sbjct: 69 DQRITREEF 77
Score = 39.7 bits (93), Expect = 3e-04
Identities = 21/174 (12%), Positives = 40/174 (22%), Gaps = 58/174 (33%)
Query: 163 EVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVG 222
+ F D+D NG I +F K
Sbjct: 5 RIAARFTTFDQDGNGHIDRSDF---------------------SGAAKAMLAEFGVAARS 43
Query: 223 EKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSR 282
++ + A A + D D D++++R
Sbjct: 44 DRGQALYGGAEALWQ-----------------------------GLAGIADRDGDQRITR 74
Query: 283 EEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
EE K++ + E + D D +G ++ +
Sbjct: 75 EEFVTGAVKRL--------RDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120
Score = 28.9 bits (65), Expect = 1.3
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 311 EHDKLVEEIFQHEDKDKNGFISHDEF 336
E+++ + F D+D NG I +F
Sbjct: 1 EYERRIAARFTTFDQDGNGHIDRSDF 26
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 73.2 bits (180), Expect = 2e-14
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 15/143 (10%)
Query: 48 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 107
T++F+ ID + D QL R+E+ + K E E + V+ I D
Sbjct: 349 TDIFRHIDKNGDGQLDRQELIDGYSKL-----SGEEVAVFDLPQIESE--VDAILGAADF 401
Query: 108 DKNGFISHDEF-----SGPK-HDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEG 161
D+NG+I + EF + L + F++ D D + ++S +E++ + E
Sbjct: 402 DRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHL--ES 459
Query: 162 SEVEEIFQHEDKDKNGFISHDEF 184
+E+ D + +G + +EF
Sbjct: 460 KTWKEMISGIDSNNDGDVDFEEF 482
Score = 47.4 bits (113), Expect = 4e-06
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 127 GLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEG--------SEVEEIFQHEDKDKNGF 178
L ++F+ ID + D QL R+E+ + K SEV+ I D D+NG+
Sbjct: 347 ELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGY 406
Query: 179 ISHDEF 184
I + EF
Sbjct: 407 IDYSEF 412
Score = 46.2 bits (110), Expect = 1e-05
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 266 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 325
T++F+ ID + D QL R+E+ + K E E + V+ I D
Sbjct: 349 TDIFRHIDKNGDGQLDRQELIDGYSKL-----SGEEVAVFDLPQIESE--VDAILGAADF 401
Query: 326 DKNGFISHDEF 336
D+NG+I + EF
Sbjct: 402 DRNGYIDYSEF 412
Score = 35.1 bits (81), Expect = 0.034
Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 17/68 (25%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F++ D D + ++S +E++ + K +E+ D + +
Sbjct: 432 FQKFDQDGNGKISVDELASVFGLDHLE-----------------SKTWKEMISGIDSNND 474
Query: 329 GFISHDEF 336
G + +EF
Sbjct: 475 GDVDFEEF 482
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 72.8 bits (179), Expect = 2e-14
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 30 ATLTFEVELLSIGDQVTT-TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVK 88
A + F L+ ++ T++FK++D + D QL ++E+ E
Sbjct: 339 AAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGE----- 393
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPK-HDELGLPNVFKEIDSDADKQ 142
L+ ++ V+ I + D DKNG+I + EF E L F D+D +
Sbjct: 394 --LKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGK 451
Query: 143 LSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+++EE++ ++ + ++ D++K+ I DEF
Sbjct: 452 ITKEELANLFGLTSISEK--TWNDVLGEADQNKDNMIDFDEF 491
Score = 44.7 bits (106), Expect = 2e-05
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 248 ATLTFEVELLSIGDQVTT-TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVK 306
A + F L+ ++ T++FK++D + D QL ++E+ E
Sbjct: 339 AAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGE----- 393
Query: 307 HMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
L+ ++ V+ I + D DKNG+I + EF
Sbjct: 394 --LKNVEEEVDNILKEVDFDKNGYIEYSEF 421
Score = 39.7 bits (93), Expect = 0.001
Identities = 38/267 (14%), Positives = 85/267 (31%), Gaps = 61/267 (22%)
Query: 81 SEGAED-VKHMLEEHDKL---VEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEID 136
S+ A++ +K ML EE +I + K D+ L +
Sbjct: 275 SDEAKELIKLMLTYDYNKRCTAEEALNSR------WIKKYANNINKSDQKTLCGALSNMR 328
Query: 137 SDADKQLSREEVSEYLKKQMV-AAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDR 195
Q + ++ ++ E E+ +IF+ DK+ +G + E
Sbjct: 329 KFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKEL----------- 377
Query: 196 DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFE-- 253
+ V++ + L E+ E+ I + + G + +
Sbjct: 378 -------IEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNG---------YIEYSEF 421
Query: 254 ----VELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHML 309
++ + + F D+D ++++EE++ +
Sbjct: 422 ISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSI--------------- 466
Query: 310 EEHDKLVEEIFQHEDKDKNGFISHDEF 336
+K ++ D++K+ I DEF
Sbjct: 467 --SEKTWNDVLGEADQNKDNMIDFDEF 491
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 68.8 bits (168), Expect = 5e-14
Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 18/151 (11%)
Query: 50 VFKEI-DSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
F D + D + + + + + +GS D K M + ++ D +
Sbjct: 13 TFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADIN 72
Query: 109 KNGFISHDEF---------------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLK 153
K+ +S +E+ P + +P +FK +D D + EE Y K
Sbjct: 73 KDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCK 132
Query: 154 KQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ +V ++ + +
Sbjct: 133 NFQLQCA--DVPAVYNVITDGGKVTFDLNRY 161
Score = 49.1 bits (117), Expect = 3e-07
Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 12/110 (10%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
++ D + D +S EE +K + + V + + +F+ D
Sbjct: 64 DLKGRADINKDDVVSWEEYLAMWEKTI------ATCKSVADLPAWCQNRIPFLFKGMDVS 117
Query: 109 KNGFISHDEFSGPKHDELGLPN-----VFKEIDSDADKQLSREEVSEYLK 153
+G + +EF L V+ I E
Sbjct: 118 GDGIVDLEEFQN-YCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166
Score = 40.3 bits (94), Expect = 3e-04
Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 268 VFKEI-DSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 326
F D + D + + + + + +GS D K M + ++ D +
Sbjct: 13 TFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADIN 72
Query: 327 KNGFISHDEF 336
K+ +S +E+
Sbjct: 73 KDDVVSWEEY 82
Score = 38.0 bits (88), Expect = 0.002
Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 326
++ D + D +S EE +K + + V + + +F+ D
Sbjct: 64 DLKGRADINKDDVVSWEEYLAMWEKTI------ATCKSVADLPAWCQNRIPFLFKGMDVS 117
Query: 327 KNGFISHDEF 336
+G + +EF
Sbjct: 118 GDGIVDLEEF 127
Score = 35.7 bits (82), Expect = 0.010
Identities = 19/178 (10%), Positives = 48/178 (26%), Gaps = 29/178 (16%)
Query: 163 EVEEIFQH-EDKDKNGFISHDEFS--GPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEM 219
+++ F D + +G I ++F ++ E++ + ++ + L
Sbjct: 9 KIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGR 68
Query: 220 CVGEK-RKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADK 278
K ++ LA ++ + + +FK +D D
Sbjct: 69 ADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPF--------LFKGMDVSGDG 120
Query: 279 QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ EE Y K + V ++ + +
Sbjct: 121 IVDLEEFQNYCKN-----------------FQLQCADVPAVYNVITDGGKVTFDLNRY 161
Score = 34.9 bits (80), Expect = 0.016
Identities = 16/108 (14%), Positives = 39/108 (36%), Gaps = 16/108 (14%)
Query: 92 EEHDKLVEEIFQH-EDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSE 150
+ + ++ F D + +G I ++F E K++++ +S+
Sbjct: 4 DFQKQKIKFTFDFFLDMNHDGSIQDNDF---------------EDMMTRYKEVNKGSLSD 48
Query: 151 YLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQP 198
K M A+ E ++ D +K+ +S +E+ +
Sbjct: 49 ADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSV 96
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 67.4 bits (165), Expect = 1e-13
Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 17/146 (11%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F ID D D ++R + ++ A E AE K +++ + +
Sbjct: 11 YFNRIDFDKDGAITRMDFESMAER--FAKESEMKAEHAKVLMDSLTGVWDNFLT--AVAG 66
Query: 110 NGFISHDEF-----------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVA 158
I F E LP F+ +D++ D +SR+E + M+
Sbjct: 67 GKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFG--MLG 124
Query: 159 AEGSEVEEIFQHEDKDKNGFISHDEF 184
+ + F D + +G +S +EF
Sbjct: 125 LDKTMAPASFDAIDTNNDGLLSLEEF 150
Score = 46.6 bits (111), Expect = 2e-06
Identities = 20/115 (17%), Positives = 36/115 (31%), Gaps = 23/115 (20%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF-------------SGPKHDEL--GLPNVFKEID 136
K+ + F D DK+G I+ +F L L V+
Sbjct: 3 LWVQKM-KTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61
Query: 137 SDADK--QLSREEVSEYLKKQMVAAEGSEV-----EEIFQHEDKDKNGFISHDEF 184
+ + +K+ + E V F+ D +++ IS DE+
Sbjct: 62 TAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEY 116
Score = 38.2 bits (89), Expect = 0.001
Identities = 26/186 (13%), Positives = 55/186 (29%), Gaps = 52/186 (27%)
Query: 162 SEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCV 221
+++ F D DK+G I+ +F + + + +
Sbjct: 6 QKMKTYFNRIDFDKDGAITRMDF---------------------ESMAERFAKESEMKAE 44
Query: 222 GEKRKLTIPPALAYGDRGAGNVIPGGATLTFE------VELLSIGD-----QVTTTNVFK 270
K + + A GG + E++ + + F+
Sbjct: 45 HAKVLMDSLTGVWDNFLTAVA---GGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFR 101
Query: 271 EIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGF 330
+D++ D +SR+E + ML + F D + +G
Sbjct: 102 AVDTNEDNNISRDEYGIFFG-----------------MLGLDKTMAPASFDAIDTNNDGL 144
Query: 331 ISHDEF 336
+S +EF
Sbjct: 145 LSLEEF 150
Score = 27.4 bits (61), Expect = 4.8
Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 310 EEHDKLVEEIFQHEDKDKNGFISHDEF 336
K+ + F D DK+G I+ +F
Sbjct: 3 LWVQKM-KTYFNRIDFDKDGAITRMDF 28
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 66.7 bits (163), Expect = 2e-13
Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 19/148 (12%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+ +D D +SRE+ + +A AE + +E ++ +++
Sbjct: 19 RMQRVDVTGDGFISREDYELIAVR--IAKIAKLSAEKAEETRQEFLRVADQL----GLAP 72
Query: 110 NGFISHDEF-------------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQM 156
IS +E + ++ ID+D D +S E +L+
Sbjct: 73 GVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVG 132
Query: 157 VAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ F D +KNG IS DEF
Sbjct: 133 PDLTDDKAITCFNTLDFNKNGQISRDEF 160
Score = 38.2 bits (89), Expect = 0.001
Identities = 28/184 (15%), Positives = 49/184 (26%), Gaps = 48/184 (26%)
Query: 163 EVEEIFQHEDKDKNGFISHDEFSG----PKHDELHDRDQPFTFTLGVGQVIKGWDQG--- 215
+++ Q D +GFIS +++ ++ +V
Sbjct: 15 KMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGV 74
Query: 216 ---LTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEI 272
+ E V L + + ++ I
Sbjct: 75 RISVEEAAVNATDSLLKMKGEE-----------------------KAMAVIQSLIMYDCI 111
Query: 273 DSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFIS 332
D+D D +S E +L+ + D F D +KNG IS
Sbjct: 112 DTDKDGYVSLPEFKAFLQA---------------VGPDLTDDKAITCFNTLDFNKNGQIS 156
Query: 333 HDEF 336
DEF
Sbjct: 157 RDEF 160
Score = 38.2 bits (89), Expect = 0.001
Identities = 15/110 (13%), Positives = 26/110 (23%), Gaps = 22/110 (20%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
K+ + Q D +GFIS +++ + R
Sbjct: 11 YHLRKM-KTRMQRVDVTGDGFISREDY---------------------ELIAVRIAKIAK 48
Query: 152 LKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTF 201
L + E + IS +E + D L
Sbjct: 49 LSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKA 98
Score = 28.6 bits (64), Expect = 2.4
Identities = 7/27 (25%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 310 EEHDKLVEEIFQHEDKDKNGFISHDEF 336
K+ + Q D +GFIS +++
Sbjct: 11 YHLRKM-KTRMQRVDVTGDGFISREDY 36
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling
protein; 2.85A {Arabidopsis thaliana}
Length = 338
Score = 68.9 bits (168), Expect = 2e-13
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 190 DELHDRDQPFTFTLGV-GQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAG--NVIPG 246
++ QP LG + + G G+ M GE+ + + LAYG G +P
Sbjct: 86 EDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPP 145
Query: 247 GATLTFEVEL 256
A L +EVE+
Sbjct: 146 MADLLYEVEV 155
Score = 41.2 bits (96), Expect = 3e-04
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAG--NVIPGGATLTFEVEL 38
M GE+ + + LAYG G +P A L +EVE+
Sbjct: 116 MKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEV 155
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent
kinase, structural genomics, structural GE consortium,
SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 66.2 bits (162), Expect = 5e-13
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 30 ATLTFEVELLSIGDQVTT-TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVK 88
A + F L+ ++ T +F+++D++ D QL R+E+ E +K M + D
Sbjct: 24 AAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSS 83
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEF---SGPKHDELG---LPNVFKEIDSDADKQ 142
+ E D +++ + D D+NG+I + EF K L L F++ DSD +
Sbjct: 84 QIEAEVDHILQSV----DFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGK 139
Query: 143 LSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
++ EE+ V E ++ Q DK+ +G + +EF
Sbjct: 140 ITNEELGRLFGVTEVDDE--TWHQVLQECDKNNDGEVDFEEF 179
Score = 41.1 bits (97), Expect = 1e-04
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 248 ATLTFEVELLSIGDQVTT-TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVK 306
A + F L+ ++ T +F+++D++ D QL R+E+ E +K M + D
Sbjct: 24 AAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSS 83
Query: 307 HMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ E D +++ + D D+NG+I + EF
Sbjct: 84 QIEAEVDHILQSV----DFDRNGYIEYSEF 109
Score = 31.1 bits (71), Expect = 0.38
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 17/68 (25%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F++ DSD +++ EE+ + E +L+E DK + +
Sbjct: 129 FQQFDSDGSGKITNEEL------GRLFGVTEVDDETWHQVLQECDK-----------NND 171
Query: 329 GFISHDEF 336
G + +EF
Sbjct: 172 GEVDFEEF 179
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 66.4 bits (162), Expect = 2e-12
Identities = 24/136 (17%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
+F + S +++ + L K + E ++++F + D
Sbjct: 126 QLFLSSAVSGSGKFSFQDLKQVLAK-------------YADTIPEGP--LKKLFVMVEND 170
Query: 109 KNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIF 168
G +S+ +D L F++ID++++ LSR+E E+ + + S + +F
Sbjct: 171 TKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKK-SVQDALF 229
Query: 169 QHEDKDKNGFISHDEF 184
++ D+D++ + E+
Sbjct: 230 RYADEDESDDVGFSEY 245
Score = 60.2 bits (146), Expect = 2e-10
Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
F++ID++++ LSR+E E+ + + + + + +F++ D+D
Sbjct: 192 ADFRKIDTNSNGTLSRKEFREHFVR----------------LGFDKKSVQDALFRYADED 235
Query: 109 KNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKK-QMVAAEGSEVEEI 167
++ + E+ L L ++ D D QLS+EEV + L+ + + + E
Sbjct: 236 ESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQ 295
Query: 168 FQHEDKDKNGFISHDEF 184
F D D + +S+ EF
Sbjct: 296 FSVVDVDDSKSLSYQEF 312
Score = 52.5 bits (126), Expect = 6e-08
Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 14/137 (10%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
E D + E +++ AA G AE + + + + + D
Sbjct: 56 KLAEYDQKVQNEFDARER---AEREREAARGDAAAEKQR---------LASLLKDLEDDA 103
Query: 110 NGFISHDEFSG--PKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEI 167
+G+ + D L +F + S +++ + L K ++++
Sbjct: 104 SGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKL 163
Query: 168 FQHEDKDKNGFISHDEF 184
F + D G +S+
Sbjct: 164 FVMVENDTKGRMSYITL 180
Score = 47.5 bits (113), Expect = 2e-06
Identities = 38/305 (12%), Positives = 103/305 (33%), Gaps = 67/305 (21%)
Query: 52 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 111
E + K+L + + + A+ ++ ++ K L E+D+ V+ F ++ +
Sbjct: 18 HENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAER- 76
Query: 112 FISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHE 171
++ L ++ K+++ DA L ++ + + + ++F
Sbjct: 77 -EREAARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLSEE----DTNILRQLFLSS 131
Query: 172 DKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPP 231
+G S + QV+ + + E + +
Sbjct: 132 AVSGSGKFSFQDL---------------------KQVLAKYADTIPEGPLKK-------- 162
Query: 232 ALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTT-TNVFKEIDSDADKQLSREEVSEYLK 290
+ +++ L+++ + + F++ID++++ LSR+E E+
Sbjct: 163 LFVMVEND------TKGRMSYI-TLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFV 215
Query: 291 KQMVAAEGSEGAEDVKHMLEEHDK-------------------LVEEIFQHEDKDKNGFI 331
+ G + + D+ ++ ++ D DK+G +
Sbjct: 216 RL-----GFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQL 270
Query: 332 SHDEF 336
S +E
Sbjct: 271 SKEEV 275
Score = 34.0 bits (78), Expect = 0.064
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 14/71 (19%)
Query: 48 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 107
++ D D QLS+EEV + L+ H+ E K E F D
Sbjct: 256 RILYAFADFDKSGQLSKEEVQKVLEDA--------------HIPESARKKFEHQFSVVDV 301
Query: 108 DKNGFISHDEF 118
D + +S+ EF
Sbjct: 302 DDSKSLSYQEF 312
Score = 34.0 bits (78), Expect = 0.064
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 14/71 (19%)
Query: 266 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 325
++ D D QLS+EEV + L+ H+ E K E F D
Sbjct: 256 RILYAFADFDKSGQLSKEEVQKVLEDA--------------HIPESARKKFEHQFSVVDV 301
Query: 326 DKNGFISHDEF 336
D + +S+ EF
Sbjct: 302 DDSKSLSYQEF 312
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 62.1 bits (151), Expect = 1e-11
Identities = 27/152 (17%), Positives = 53/152 (34%), Gaps = 25/152 (16%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F D D+D ++ +EV + + + + E V+ M + V F H+ +
Sbjct: 41 RFDTFDLDSDGKMEMDEVLYWPDR--MRQLVNATDEQVEKMRDA----VRVFFLHKGVEP 94
Query: 110 NGFISHDEF-----------------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYL 152
+ +++ P L + + +D D D + +E+ +
Sbjct: 95 VNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMM 154
Query: 153 KKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K V E F+ D DK+G + E
Sbjct: 155 KAFDVPQE--AAYTFFEKADTDKSGKLERTEL 184
Score = 48.7 bits (116), Expect = 5e-07
Identities = 18/139 (12%), Positives = 43/139 (30%), Gaps = 26/139 (18%)
Query: 72 KKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFS----------GP 121
+ + + G++ +V+ + + + + F D D +G + DE
Sbjct: 12 SYRYLRSVGNQWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNA 71
Query: 122 KHDEL-----GLPNVFKEIDSDADKQLSREE-----------VSEYLKKQMVAAEGSEVE 165
+++ + F + L RE+ E ++ +
Sbjct: 72 TDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSN 131
Query: 166 EIFQHEDKDKNGFISHDEF 184
+ D D +G + DE
Sbjct: 132 SYYDVLDDDGDGTVDVDEL 150
Score = 39.4 bits (92), Expect = 6e-04
Identities = 12/69 (17%), Positives = 21/69 (30%), Gaps = 4/69 (5%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
F + L RE+ E + +E + + L + D D
Sbjct: 86 FFLHKGVEPVNGLLREDWVEANRVFA----EAERERERRGEPSLIALLSNSYYDVLDDDG 141
Query: 328 NGFISHDEF 336
+G + DE
Sbjct: 142 DGTVDVDEL 150
Score = 37.9 bits (88), Expect = 0.002
Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
F D D+D ++ +EV + + + + E V+ M + V F H+ +
Sbjct: 41 RFDTFDLDSDGKMEMDEVLYWPDR--MRQLVNATDEQVEKMRDA----VRVFFLHKGVEP 94
Query: 328 NGFISHDEF 336
+ +++
Sbjct: 95 VNGLLREDW 103
Score = 36.0 bits (83), Expect = 0.009
Identities = 24/175 (13%), Positives = 48/175 (27%), Gaps = 26/175 (14%)
Query: 162 SEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCV 221
S + + F D D +G + DE + + ++ + V
Sbjct: 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPV 95
Query: 222 GEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLS 281
L D N + A E + + + + +D D D +
Sbjct: 96 NG---------LLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVD 146
Query: 282 REEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+E+ +K + + F+ D DK+G + E
Sbjct: 147 VDELKTMMK-----------------AFDVPQEAAYTFFEKADTDKSGKLERTEL 184
Score = 27.5 bits (61), Expect = 4.8
Identities = 8/47 (17%), Positives = 21/47 (44%)
Query: 290 KKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ + + G++ +V+ + + + + F D D +G + DE
Sbjct: 12 SYRYLRSVGNQWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEV 58
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 59.5 bits (144), Expect = 1e-10
Identities = 28/153 (18%), Positives = 56/153 (36%), Gaps = 12/153 (7%)
Query: 39 LSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLV 98
+ + +FK+ D + +L +EV + + E V+ + +
Sbjct: 42 KTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEF---TSRVRDITKR--AFD 96
Query: 99 EEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEYL 152
+ + G EF +D L +F EID+ + + EE +
Sbjct: 97 KSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAV 156
Query: 153 KK-QMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K + A+ + +F+ DK+ G ++ DEF
Sbjct: 157 PKLEAWGAKVEDPAALFKELDKNGTGSVTFDEF 189
Score = 44.5 bits (105), Expect = 2e-05
Identities = 37/204 (18%), Positives = 69/204 (33%), Gaps = 33/204 (16%)
Query: 133 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHDEL 192
K+ D++ + E + + + ++ A E+F+ DK++ G + +DE + L
Sbjct: 19 KDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVL 78
Query: 193 HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTF 252
D+ + + KR L G+ L F
Sbjct: 79 ------------------KLDEFTSRVRDITKRAFDKSRTLGSKLENKGS-EDFVEFLEF 119
Query: 253 EVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEH 312
+ L I D T +F EID+ + + EE + K
Sbjct: 120 RLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLE--------------AWGAK 165
Query: 313 DKLVEEIFQHEDKDKNGFISHDEF 336
+ +F+ DK+ G ++ DEF
Sbjct: 166 VEDPAALFKELDKNGTGSVTFDEF 189
Score = 41.4 bits (97), Expect = 2e-04
Identities = 21/149 (14%), Positives = 45/149 (30%), Gaps = 31/149 (20%)
Query: 52 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 111
K+ D++ + E + + + ++ A E+F+ DK++ G
Sbjct: 19 KDGKKAKDRKEAWERIRQAIPREKTAEAKQR---------------RIELFKKFDKNETG 63
Query: 112 FISHDEFSGPKHDELGLPNVFKEI----------------DSDADKQLSREEVSEYLKKQ 155
+ +DE + L L + + E E+
Sbjct: 64 KLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLML 123
Query: 156 MVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ E+ +F D N + +EF
Sbjct: 124 CYIYDFFELTVMFDEIDASGNMLVDEEEF 152
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 56.9 bits (138), Expect = 6e-10
Identities = 28/145 (19%), Positives = 60/145 (41%), Gaps = 26/145 (17%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F +D D +++E++ + L+K G + + +L++ D D
Sbjct: 57 TFLVLDEDGKGYITKEQLKKGLEKD-----GLKLPYNFDLLLDQ-----------IDSDG 100
Query: 110 NGFISHDEF-----SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYL-----KKQMVAA 159
+G I + EF + + + F+ D D D +++ E++ L K +
Sbjct: 101 SGKIDYTEFIAAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQR 160
Query: 160 EGSEVEEIFQHEDKDKNGFISHDEF 184
+ + V+ + + DK+ +G I EF
Sbjct: 161 DVNRVKRMIRDVDKNNDGKIDFHEF 185
Score = 37.6 bits (88), Expect = 0.002
Identities = 16/93 (17%), Positives = 35/93 (37%), Gaps = 29/93 (31%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHD-------------- 313
F +D D +++E++ + L+K G + + +L++ D
Sbjct: 57 TFLVLDEDGKGYITKEQLKKGLEKD-----GLKLPYNFDLLLDQIDSDGSGKIDYTEFIA 111
Query: 314 ------KLVEE----IFQHEDKDKNGFISHDEF 336
+L ++ F+ D D +G I+ E
Sbjct: 112 AALDRKQLSKKLIYCAFRVFDVDNDGEITTAEL 144
Score = 32.2 bits (74), Expect = 0.15
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 10/68 (14%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F+ D D D +++ E++ L ++ + V+ + + DK+ +
Sbjct: 128 FRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNR----------VKRMIRDVDKNND 177
Query: 329 GFISHDEF 336
G I EF
Sbjct: 178 GKIDFHEF 185
Score = 28.8 bits (65), Expect = 2.2
Identities = 7/44 (15%), Positives = 17/44 (38%), Gaps = 13/44 (29%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+Q + +V + + F D+D G+I+ ++
Sbjct: 44 QQSNDYDVEKL-------------KSTFLVLDEDGKGYITKEQL 74
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF
domain, chaperone, peptidyl-prolyl isomerase isomerase;
1.35A {Escherichia coli}
Length = 169
Score = 56.5 bits (137), Expect = 6e-10
Identities = 16/78 (20%), Positives = 30/78 (38%)
Query: 190 DELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGAT 249
+ + +P F LG + +G +Q L + VG+K ++ P A+G +
Sbjct: 46 ESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRR 105
Query: 250 LTFEVELLSIGDQVTTTN 267
+ IG + T
Sbjct: 106 EFMDAGEPEIGAIMLFTA 123
Score = 31.9 bits (73), Expect = 0.17
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTN 49
+ VG+K ++ P A+G + + IG + T
Sbjct: 75 LKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTA 123
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 56.2 bits (136), Expect = 1e-09
Identities = 27/149 (18%), Positives = 52/149 (34%), Gaps = 32/149 (21%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
+F ++D++ + LS E+ L + + I Q D +
Sbjct: 43 ELFYKLDTNHNGSLSHREIYTVLASVGIK-----------------KWDINRILQALDIN 85
Query: 109 KNGFISHDEF-----SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE 163
G I++ EF + L F +ID D D +S+ ++ + +++ +
Sbjct: 86 DRGNITYTEFMAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNN--D 143
Query: 164 VEEIFQHEDKDKNGF--------ISHDEF 184
++ F K G IS EF
Sbjct: 144 IDNFFLSVHSIKKGIPREHIINKISFQEF 172
Score = 47.7 bits (114), Expect = 9e-07
Identities = 21/102 (20%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 90 MLEEHDKLVEEIFQHEDKDKNGFISHDEF------SGPKHDELGLPNVFKEIDSDADKQL 143
++ H K + E+F D + NG +SH E G K ++ + + +D + +
Sbjct: 33 VINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWDIN--RILQALDINDRGNI 90
Query: 144 SREE-VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ E ++ + + + + ++ F DKD++G+IS +
Sbjct: 91 TYTEFMAGCYRWKNIEST--FLKAAFNKIDKDEDGYISKSDI 130
Score = 36.1 bits (84), Expect = 0.006
Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 30/94 (31%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHD------------- 313
+F ++D++ + LS E+ L + D+ +L+ D
Sbjct: 43 ELFYKLDTNHNGSLSHREIYTVLASVGIKKW------DINRILQALDINDRGNITYTEFM 96
Query: 314 -----------KLVEEIFQHEDKDKNGFISHDEF 336
++ F DKD++G+IS +
Sbjct: 97 AGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDI 130
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 57.2 bits (138), Expect = 1e-09
Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 28/155 (18%)
Query: 52 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 111
+ D ++ E L + E + + + + ++ D D +G
Sbjct: 65 DQYGQRDDGKIGIVE----LAHVLPTEENFLLLFRCQQLKSCEE--FMKTWRKYDTDHSG 118
Query: 112 FISHDEF--------------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQM- 156
FI +E + K DS+ D +L E++ L Q
Sbjct: 119 FIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQEN 178
Query: 157 -------VAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ G E + F+ D+D NG+I +E
Sbjct: 179 FLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENEL 213
Score = 47.6 bits (113), Expect = 2e-06
Identities = 17/135 (12%), Positives = 41/135 (30%), Gaps = 30/135 (22%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
++ D+D L +E+ ++ + + E V++ +
Sbjct: 21 IWLHFDADGSGYLEGKELQNLIQ-----ELLQARKKAGLELSPEMKTFVDQY----GQRD 71
Query: 110 NGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQ 169
+G I E + E +F+ + ++ + ++
Sbjct: 72 DGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEF---------------------MKTWR 110
Query: 170 HEDKDKNGFISHDEF 184
D D +GFI +E
Sbjct: 111 KYDTDHSGFIETEEL 125
Score = 43.3 bits (102), Expect = 5e-05
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 32/138 (23%)
Query: 47 TTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHED 106
T + K DS+ D +L E++ L Q +G + + F+ D
Sbjct: 149 TDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEF-------NKAFELYD 201
Query: 107 KDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEE 166
+D NG+I +E L + K++ ++L +S Y K M
Sbjct: 202 QDGNGYIDENE----------LDALLKDLCEKNKQELDINNISTYKKNIM---------- 241
Query: 167 IFQHEDKDKNGFISHDEF 184
G + +
Sbjct: 242 -----ALSDGGKLYRTDL 254
Score = 38.7 bits (90), Expect = 0.001
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 265 TTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHED 324
T + K DS+ D +L E++ L Q +G + + F+ D
Sbjct: 149 TDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNK-------AFELYD 201
Query: 325 KDKNGFISHDEF 336
+D NG+I +E
Sbjct: 202 QDGNGYIDENEL 213
Score = 34.5 bits (79), Expect = 0.033
Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 6/67 (8%)
Query: 270 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 329
+ D ++ E L + E + + + + ++ D D +G
Sbjct: 65 DQYGQRDDGKIGIVE----LAHVLPTEENFLLLFRCQQLKSCEE--FMKTWRKYDTDHSG 118
Query: 330 FISHDEF 336
FI +E
Sbjct: 119 FIETEEL 125
Score = 34.1 bits (78), Expect = 0.043
Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 37/183 (20%)
Query: 162 SEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCV 221
S+ EI+ H D D +G++ E +I+ Q + +
Sbjct: 16 SQFFEIWLHFDADGSGYLEGKEL---------------------QNLIQELLQARKKAGL 54
Query: 222 GEKRKLTIPPALAYGDRGAG--------NVIPGGATLTFEVELLSIGDQVTTTNVFKEID 273
++ YG R G +V+P + +++ D
Sbjct: 55 ELSPEM-KTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYD 113
Query: 274 SDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISH 333
+D + EE+ +LK + E + D + E D +++ D + +G +
Sbjct: 114 TDHSGFIETEELKNFLKDLL---EKANKTVDDTKLAEYTDLMLKLF----DSNNDGKLEL 166
Query: 334 DEF 336
E
Sbjct: 167 TEM 169
>1ix5_A FKBP; ppiase, isomerase; NMR
{Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Length = 151
Score = 55.1 bits (133), Expect = 1e-09
Identities = 19/89 (21%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 157 VAAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHD--ELHDRDQPFTFTLGVGQVIKGWDQ 214
+ +G +++ + + + + F + E + +P F +G GQ+I+G+++
Sbjct: 1 MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEE 60
Query: 215 GLTEMCVGEKRKLTIPPALAYGDRGAGNV 243
+ +M VG+++ + IP AYG+R +
Sbjct: 61 AVLDMEVGDEKTVKIPAEKAYGNRNEMLI 89
Score = 31.6 bits (72), Expect = 0.18
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNV 25
M VG+++ + IP AYG+R +
Sbjct: 65 MEVGDEKTVKIPAEKAYGNRNEMLI 89
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 58.1 bits (140), Expect = 2e-09
Identities = 50/283 (17%), Positives = 92/283 (32%), Gaps = 81/283 (28%)
Query: 90 M-LEEHDK--LVEEIFQHEDK---DKNGF-ISHDEFSGPKHDELGLPNVFKEIDSDADKQ 142
M ++ + ++++ D D GF I + P + L F K+
Sbjct: 1631 MGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVN----LTIHFGGEKG---KR 1683
Query: 143 LSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRD--QP-- 198
+ RE S + + +V + + E+IF+ ++ + F K L QP
Sbjct: 1684 I-RENYSAMIFETIVDGK-LKTEKIFKEINEHSTSYT----FRSEK-GLLSATQFTQPAL 1736
Query: 199 FTFTLGVGQVIKGWDQGLTEMC-------VGE---------------------KRKLTIP 230
+ +K GL +GE R +T+
Sbjct: 1737 TLMEKAAFEDLKSK--GLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQ 1794
Query: 231 PALAYGDRGAGN-----VIPGGATLTFEVE-LLSIGDQV-TTTNVFKEI----------- 272
A+ + G N + PG +F E L + ++V T EI
Sbjct: 1795 VAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYV 1854
Query: 273 ---DSDADKQLSREEVSEYLKKQ---MVAAEGSEGAEDVKHML 309
D A ++ V ++K Q ++ + S E+V+ L
Sbjct: 1855 AAGDLRALDTVT--NVLNFIKLQKIDIIELQKSLSLEEVEGHL 1895
Score = 39.3 bits (91), Expect = 0.002
Identities = 45/262 (17%), Positives = 71/262 (27%), Gaps = 89/262 (33%)
Query: 77 AAEGSEGAEDVKHML-------EEHDKLVEEIFQHEDKDKNGFIS----HDEF--SGPKH 123
+ E +EG ML E+ V + H K IS SGP
Sbjct: 327 SLENNEGVPS--PMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQ 384
Query: 124 DELGLPNVFKEIDSDADKQLSREEVSE-------------------YLKKQMVAAEGSEV 164
GL ++ + + SR SE L
Sbjct: 385 SLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLV---------PA 435
Query: 165 EEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTE---MCV 221
++ + N + + P +D TF G ++ ++E C+
Sbjct: 436 SDLINKDLVKNNVSFNAKDIQIPVYD---------TFD---GSDLRVLSGSISERIVDCI 483
Query: 222 GEKR----KLTIPPA---LAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNV----FK 270
T A L +G PGGA+ +G +T N +
Sbjct: 484 IRLPVKWETTTQFKATHILDFG--------PGGAS--------GLGV-LTHRNKDGTGVR 526
Query: 271 EIDSDADKQLSREEVSEYLKKQ 292
I + L +Y KQ
Sbjct: 527 VIVAGT---LDINPDDDYGFKQ 545
Score = 36.2 bits (83), Expect = 0.017
Identities = 33/239 (13%), Positives = 75/239 (31%), Gaps = 71/239 (29%)
Query: 7 RKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTT--NVFKEIDSDADKQLSR 64
R LT L++G ++P F L +Q + +D D+ +
Sbjct: 7 RPLT----LSHGSLEHVLLVP--TASFFIASQLQ--EQFNKILPEPTEGFAAD-DEPTTP 57
Query: 65 EE-VSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQH-EDKDKNGFISHDEFSGPK 122
E V ++L V++ + D+++ E+ ++ ++
Sbjct: 58 AELVGKFL--GYVSSLVEPSKVG------QFDQVLNLCLTEFENC----YLEGNDI---- 101
Query: 123 HDELGLPNVFKEIDSDADKQL--SREEVSEYLKKQMVAAEGSEVEE---IFQHEDKDKNG 177
H + ++ + D L ++E + Y+ +++A + + +F+ +
Sbjct: 102 HA------LAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQ 155
Query: 178 FISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKL--TIPPALA 234
++ F G QG T+ E R L T +
Sbjct: 156 LVA--IFGG---------------------------QGNTDDYFEELRDLYQTYHVLVG 185
Score = 35.8 bits (82), Expect = 0.021
Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 26/110 (23%)
Query: 6 KRKLTIPPALAYGDRGAGN-----VIPGGATLTFEVE-LLSIGDQV-TTTNVFKEI---- 54
R +T+ A+ + G N + PG +F E L + ++V T EI
Sbjct: 1788 YRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYN 1847
Query: 55 ----------DSDADKQLSREEVSEYLKKQ---MVAAEGSEGAEDVKHML 91
D A ++ V ++K Q ++ + S E+V+ L
Sbjct: 1848 VENQQYVAAGDLRALDTVT--NVLNFIKLQKIDIIELQKSLSLEEVEGHL 1895
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 56.6 bits (136), Expect = 2e-09
Identities = 41/290 (14%), Positives = 87/290 (30%), Gaps = 46/290 (15%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+++ D+D + + +E+ ++ + + K E ++ + D
Sbjct: 16 IWQHFDADDNGYIEGKELDDFFRHM-----LKKLQPKDKITDERVQQIKKSFMSAYDATF 70
Query: 110 NGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQ 169
+G + +E + E +++ E +I++
Sbjct: 71 DGRLQIEELA-------------------NMILPQEENFLLIFRREAPLDNSVEFMKIWR 111
Query: 170 HEDKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTI 229
D D +G+IS E + L D + ++ + D + + +L +
Sbjct: 112 KYDADSSGYISAAEL----KNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDL 167
Query: 230 ---PPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVS 286
LA + ++ +F D L EV
Sbjct: 168 NDLARILALQENFLLQFKMDASSQVERKRDFE--------KIFAHYDVSRTGALEGPEVD 219
Query: 287 EYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
++K M S D+ DK E + H D +K+G I E
Sbjct: 220 GFVKDMMELVRPSISGGDL-------DKFRECLLTHCDMNKDGKIQKSEL 262
Score = 40.8 bits (95), Expect = 4e-04
Identities = 29/184 (15%), Positives = 66/184 (35%), Gaps = 29/184 (15%)
Query: 160 EGSEVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEM 219
+ + +I+QH D D NG+I E F + + ++ D+ E
Sbjct: 9 DAAGFLQIWQHFDADDNGYIEGKELD--------------DFFRHMLKKLQPKDKITDER 54
Query: 220 CVGEKRKLTIPPALAYGDR-------GAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEI 272
V + +K + A D + L + + V ++++
Sbjct: 55 -VQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKY 113
Query: 273 DSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFIS 332
D+D+ +S E+ +LK + + + D+ + + + DK+K+G +
Sbjct: 114 DADSSGYISAAELKNFLKDLFLQHKKKIPPNKL-------DEYTDAMMKIFDKNKDGRLD 166
Query: 333 HDEF 336
++
Sbjct: 167 LNDL 170
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major} SCOP:
a.39.1.8
Length = 191
Score = 55.4 bits (134), Expect = 2e-09
Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 15/136 (11%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
F+ +D+D +S E L + +A + +L +DK +
Sbjct: 31 EWFRAVDTDGSGAISVPE----LNAALSSAGVPFSLATTEKLLHMYDK-----------N 75
Query: 109 KNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIF 168
+G I+ DEF H L + F++ DS D +L EV L + +
Sbjct: 76 HSGEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALM 135
Query: 169 QHEDKDKNGFISHDEF 184
+ D+ + G + D++
Sbjct: 136 RKFDRQRRGSLGFDDY 151
Score = 42.7 bits (101), Expect = 5e-05
Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 16/101 (15%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQL 143
++ + E F+ D D +G IS E + D + ++
Sbjct: 23 MNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEK--LLHMYDKNHSGEI 80
Query: 144 SREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ +E + + + E F+ D +G + +E
Sbjct: 81 TFDEFKDLHHFIL------SMREGFRKRDSSGDGRLDSNEV 115
Score = 37.7 bits (88), Expect = 0.003
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 23/89 (25%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDK------------ 314
F+ +D+D +S E L + +A + +L +DK
Sbjct: 31 EWFRAVDTDGSGAISVPE----LNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
Query: 315 -------LVEEIFQHEDKDKNGFISHDEF 336
+ E F+ D +G + +E
Sbjct: 87 DLHHFILSMREGFRKRDSSGDGRLDSNEV 115
Score = 27.3 bits (61), Expect = 5.4
Identities = 13/91 (14%), Positives = 33/91 (36%), Gaps = 25/91 (27%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHD------------- 95
F++ DS D +L E ++ ++++ + + ++ + D
Sbjct: 97 EGFRKRDSSGDGRLDSNE----VRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYV 152
Query: 96 ------KLVEEIFQHEDKDKNGFIS--HDEF 118
V +F D+++ G ++ D F
Sbjct: 153 ELSIFVCRVRNVFAFYDRERTGQVTFTFDTF 183
Score = 27.3 bits (61), Expect = 5.4
Identities = 13/91 (14%), Positives = 33/91 (36%), Gaps = 25/91 (27%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHD------------- 313
F++ DS D +L E ++ ++++ + + ++ + D
Sbjct: 97 EGFRKRDSSGDGRLDSNE----VRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYV 152
Query: 314 ------KLVEEIFQHEDKDKNGFIS--HDEF 336
V +F D+++ G ++ D F
Sbjct: 153 ELSIFVCRVRNVFAFYDRERTGQVTFTFDTF 183
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 51.8 bits (125), Expect = 3e-09
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+FKEID + D +S EEV ++ K+ ++ IF+ D D NG I +EF
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Score = 41.8 bits (99), Expect = 1e-05
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 15/69 (21%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+FKEID + D +S EEV ++ K+ ++ IF+ D D
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQL---------------LQLIFKSIDADG 49
Query: 110 NGFISHDEF 118
NG I +EF
Sbjct: 50 NGEIDQNEF 58
Score = 41.8 bits (99), Expect = 1e-05
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 15/69 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+FKEID + D +S EEV ++ K+ ++ IF+ D D
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQL---------------LQLIFKSIDADG 49
Query: 328 NGFISHDEF 336
NG I +EF
Sbjct: 50 NGEIDQNEF 58
Score = 30.2 bits (69), Expect = 0.14
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 315 LVEEIFQHEDKDKNGFISHDEF 336
+ E +F+ D + +G +S++E
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEV 22
Score = 29.1 bits (66), Expect = 0.36
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 164 VEEIFQHEDKDKNGFISHDEF 184
E +F+ D + +G +S++E
Sbjct: 2 AEALFKEIDVNGDGAVSYEEV 22
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens}
SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Length = 336
Score = 54.5 bits (131), Expect = 1e-08
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 184 FSGPKHDELHDRDQPFTFTLGVGQ---VIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGA 240
G D+L D + F +G G+ + G ++ + M GE + + P+ A+G G
Sbjct: 51 LEGYYKDKLFD-QRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGK 109
Query: 241 -GNVIPGGATLTFEVELLSIGDQ 262
IP A L +E+ L S
Sbjct: 110 EKFQIPPNAELKYELHLKSFEKA 132
Score = 36.4 bits (84), Expect = 0.010
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 1 MCVGEKRKLTIPPALAYGDRGA-GNVIPGGATLTFEVELLSIGDQ 44
M GE + + P+ A+G G IP A L +E+ L S
Sbjct: 88 MEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKA 132
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein,
rotamase; NMR {Helicobacter pylori}
Length = 151
Score = 52.3 bits (126), Expect = 1e-08
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 190 DELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV 243
+ + +P F +G Q+I G ++ + + +GE ++ I P AYG + +
Sbjct: 28 LDSNISKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYESSYL 81
Score = 30.3 bits (69), Expect = 0.50
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNV 25
+GE ++ I P AYG + +
Sbjct: 57 AQIGEWEEVVIAPEEAYGVYESSYL 81
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 52.5 bits (126), Expect = 2e-08
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 22/152 (14%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+F +D + + ++S +E+ ++ G+ + + H VE F
Sbjct: 21 MFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQA-----KRHKDAVEAFFGGAGMKY 75
Query: 110 NGFISHDEF-----------------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYL 152
+ + P + +F +D D + ++ +E Y
Sbjct: 76 GVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYT 135
Query: 153 KKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K + + EE F+ D D++G + DE
Sbjct: 136 KAAGIIQSSEDCEETFRVCDIDESGQLDVDEM 167
Score = 32.5 bits (74), Expect = 0.12
Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 271 EIDSDADKQLSREEVS--EYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
E E Y++ E + K+ + +F DKD+N
Sbjct: 65 EAFFGGAGMKYGVETDWPAYIE-GWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQN 123
Query: 329 GFISHDEF 336
G I+ DE+
Sbjct: 124 GAITLDEW 131
Score = 32.5 bits (74), Expect = 0.12
Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 39/182 (21%)
Query: 163 EVEEIFQHEDKDKNGFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVG 222
+ +F D + NG IS DE VI +
Sbjct: 17 RHKHMFNFLDVNHNGKISLDEMV----------------YKASDIVINNLGATPEQAKRH 60
Query: 223 EKRK--------LTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDS 274
+ + + G L + ++ +F +D
Sbjct: 61 KDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDK 120
Query: 275 DADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHD 334
D + ++ +E K AA + +ED EE F+ D D++G + D
Sbjct: 121 DQNGAITLDE----WKAYTKAAGIIQSSEDC-----------EETFRVCDIDESGQLDVD 165
Query: 335 EF 336
E
Sbjct: 166 EM 167
Score = 27.5 bits (61), Expect = 6.0
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 310 EEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ + +F D + NG IS DE
Sbjct: 13 RWIGRH-KHMFNFLDVNHNGKISLDEM 38
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 51.8 bits (125), Expect = 3e-08
Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 49/181 (27%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAE-DVKHMLEEHDK------------ 96
+FK ID+D ++ +E+ + LK+ GSE E ++K +++ D
Sbjct: 15 LFKMIDTDNSGTITFDELKDGLKRV-----GSELMESEIKDLMDAADIDKSGTIDYGEFI 69
Query: 97 ----------LVEEI---FQHEDKDKNGFISHDEFSGPKH--DELGLP-----NVFKEID 136
E + F + DKD +G+I+ DE + + GL ++ KEID
Sbjct: 70 AATVHLNKLEREENLVSAFSYFDKDGSGYITLDEI---QQACKDFGLDDIHIDDMIKEID 126
Query: 137 SDADKQLSREEVSEYLKKQMVAAEGSE--------VEEIFQHEDKDKNGFISHDEFSGPK 188
D D Q+ E + ++K+ + + D N I
Sbjct: 127 QDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIEGYFKHHHH 186
Query: 189 H 189
H
Sbjct: 187 H 187
Score = 40.7 bits (96), Expect = 2e-04
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 10/104 (9%)
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSDA 139
+ + EE ++E+F+ D D +G I+ DE S E + ++ D D
Sbjct: 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESE--IKDLMDAADIDK 59
Query: 140 DKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
+ E + F + DKD +G+I+ DE
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDE 103
Score = 33.7 bits (78), Expect = 0.048
Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 7/73 (9%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
KEID D D Q+ E + ++K+ ++ L + + D N
Sbjct: 122 IKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGR--RTMRKTLN-----LRDALGLVDNGSN 174
Query: 329 GFISHDEFSGPKH 341
I H
Sbjct: 175 QVIEGYFKHHHHH 187
Score = 29.9 bits (68), Expect = 0.76
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 31/94 (32%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAE-DVKHMLEEHDK------------ 314
+FK ID+D ++ +E+ + LK+ GSE E ++K +++ D
Sbjct: 15 LFKMIDTDNSGTITFDELKDGLKRV-----GSELMESEIKDLMDAADIDKSGTIDYGEFI 69
Query: 315 ----------LVEEI---FQHEDKDKNGFISHDE 335
E + F + DKD +G+I+ DE
Sbjct: 70 AATVHLNKLEREENLVSAFSYFDKDGSGYITLDE 103
Score = 28.0 bits (63), Expect = 4.0
Identities = 7/38 (18%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 302 AEDVKHMLEEH---DKLVEEIFQHEDKDKNGFISHDEF 336
++++ ++ D ++++ + D+D +G I + EF
Sbjct: 101 LDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEF 138
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein,
chaperone; 1.95A {Methanocaldococcus jannaschii} PDB:
3pra_A
Length = 157
Score = 51.2 bits (123), Expect = 4e-08
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 191 ELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV 243
P G GQV+ G D+ + EM VGE+R++ +PP A+G R +
Sbjct: 36 NPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDPSKI 88
Score = 30.4 bits (69), Expect = 0.48
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNV 25
M VGE+R++ +PP A+G R +
Sbjct: 64 MDVGEEREVVLPPEKAFGKRDPSKI 88
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 51.3 bits (123), Expect = 5e-08
Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 22/152 (14%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+F +D + + +++ +E+ + A + + + H VE F+ +
Sbjct: 25 MFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQT-----KRHQVCVEAFFRGCGMEY 79
Query: 110 NGFISHDEF-----------------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYL 152
I+ +F + P VF D D ++ +E Y
Sbjct: 80 GKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG 139
Query: 153 KKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K ++ + E F+H D D G + DE
Sbjct: 140 KISGISPSQEDCEATFRHCDLDNAGDLDVDEM 171
Score = 32.4 bits (74), Expect = 0.12
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 270 KEIDSDADKQLSREEV--SEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
E +E+ ++L SE + ++ + + +F DKD
Sbjct: 68 VEAFFRGCGMEYGKEIAFPQFLD-GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDG 126
Query: 328 NGFISHDEF 336
+G I+ DE+
Sbjct: 127 SGTITLDEW 135
Score = 31.3 bits (71), Expect = 0.34
Identities = 10/69 (14%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+F +D + + +++ +E+ + A + + + H VE F+ +
Sbjct: 25 MFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQT-----KRHQVCVEAFFRGCGMEY 79
Query: 328 NGFISHDEF 336
I+ +F
Sbjct: 80 GKEIAFPQF 88
Score = 29.7 bits (67), Expect = 1.1
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Query: 302 AEDVKHMLEEH-----DKLVEEIFQHEDKDKNGFISHDEF 336
++ K + + E F+H D D G + DE
Sbjct: 132 LDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEM 171
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two
domain P rotamase; 2.41A {Thermus thermophilus} PDB:
3cgn_A 3luo_A*
Length = 158
Score = 50.3 bits (121), Expect = 8e-08
Identities = 14/72 (19%), Positives = 24/72 (33%)
Query: 196 DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVE 255
++ G +I G ++ L GE + +P AYG V + E
Sbjct: 24 QGELSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDA 83
Query: 256 LLSIGDQVTTTN 267
+ G Q +
Sbjct: 84 EVVPGAQFYAQD 95
Score = 31.5 bits (72), Expect = 0.23
Identities = 10/49 (20%), Positives = 15/49 (30%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTN 49
GE + +P AYG V + E + G Q +
Sbjct: 47 REEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQD 95
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 49.5 bits (119), Expect = 1e-07
Identities = 17/98 (17%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 97 LVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQLSREEV 148
+ E +F+ D + +G +S++E + L +FK ID+D + ++ + E
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQL--LQLIFKSIDADGNGEIDQNEF 58
Query: 149 SEYLKKQMVAAEGSEVEEI---FQHEDKDKNGFISHDE 183
+++ + + ++ D D +G ++ +E
Sbjct: 59 AKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 43.3 bits (103), Expect = 1e-05
Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 58/159 (36%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKK-----------QMVAAEGSEG-------------AE 85
+FKEID + D +S EEV ++ K + + ++G
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 86 DVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSR 145
L + ++ +++ D D +G ++ +E + + FK+ +
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE----------VTSFFKKHGIE------- 107
Query: 146 EEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+V E D + +G+I+ +EF
Sbjct: 108 -----------------KVAEQVMKADANGDGYITLEEF 129
Score = 34.4 bits (80), Expect = 0.014
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 24/92 (26%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKK-----------QMVAAEGSEG-------------AE 303
+FKEID + D +S EEV ++ K + + ++G
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 304 DVKHMLEEHDKLVEEIFQHEDKDKNGFISHDE 335
L + ++ +++ D D +G ++ +E
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEE 96
Score = 30.2 bits (69), Expect = 0.37
Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 302 AEDVKHMLEEH-DKLVEEIFQHEDKDKNGFISHDEF 336
E+V ++H + V E D + +G+I+ +EF
Sbjct: 94 KEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEF 129
Score = 27.9 bits (63), Expect = 2.9
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 315 LVEEIFQHEDKDKNGFISHDE 335
+ E +F+ D + +G +S++E
Sbjct: 1 MAEALFKEIDVNGDGAVSYEE 21
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone,
rotamase; NMR {Escherichia coli}
Length = 171
Score = 50.0 bits (120), Expect = 1e-07
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 196 DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVI 244
P + G G +I G + L VG+K + + AYG V
Sbjct: 29 SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLVQ 77
Score = 29.6 bits (67), Expect = 0.94
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVI 26
VG+K + + AYG V
Sbjct: 52 HEVGDKFDVAVGANDAYGQYDENLVQ 77
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein,
cobalt, copper, cytoplasm, metal- binding, nickel,
rotamase, zinc; NMR {Escherichia coli}
Length = 196
Score = 50.5 bits (121), Expect = 1e-07
Identities = 16/72 (22%), Positives = 26/72 (36%)
Query: 196 DQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVE 255
P + G G +I G + L VG+K + + AYG V + V+
Sbjct: 29 SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVD 88
Query: 256 LLSIGDQVTTTN 267
L +G +
Sbjct: 89 ELQVGMRFLAET 100
Score = 30.0 bits (68), Expect = 0.66
Identities = 10/49 (20%), Positives = 17/49 (34%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNVIPGGATLTFEVELLSIGDQVTTTN 49
VG+K + + AYG V + V+ L +G +
Sbjct: 52 HEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAET 100
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 50.2 bits (120), Expect = 2e-07
Identities = 22/148 (14%), Positives = 49/148 (33%), Gaps = 32/148 (21%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F + E L Q + ++ +K +++++ D +K+
Sbjct: 28 FMMEYPSG--LQTLHEFKTLLGLQG--------------LNQKANKHIDQVYNTFDTNKD 71
Query: 111 GFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS 162
GF+ EF +L FK D+D + + + E+ +
Sbjct: 72 GFVDFLEFIAAVNLIMQEKMEQKLKW--YFKLYDADGNGSIDKNELLDMFMAVQALNGQQ 129
Query: 163 E------VEEIFQHEDKDKNGFISHDEF 184
+ +F D + +G ++ +EF
Sbjct: 130 TLSPEEFINLVFHKIDINNDGELTLEEF 157
Score = 38.6 bits (90), Expect = 0.001
Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
FK D+D + + + E+ M A + + ++ + +F D + +
Sbjct: 99 FKLYDADGNGSIDKNEL-----LDMFMAVQALNGQQ----TLSPEEFINLVFHKIDINND 149
Query: 111 GFISHDEF-SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS 162
G ++ +EF +G D+ L V+K D ++ ++ +
Sbjct: 150 GELTLEEFINGMAKDQDLLEIVYKSFDFSNVLRVICNGKQPDMETDSSKSPDK 202
Score = 38.2 bits (89), Expect = 0.002
Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
FK D+D + + + E+ M A + + ++ + +F D + +
Sbjct: 99 FKLYDADGNGSIDKNEL-----LDMFMAVQALNGQQ----TLSPEEFINLVFHKIDINND 149
Query: 329 GFISHDEF 336
G ++ +EF
Sbjct: 150 GELTLEEF 157
Score = 29.8 bits (67), Expect = 1.1
Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 15/69 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
V+ D++ D + E + + + KL + F+ D D
Sbjct: 62 VYNTFDTNKDGFVDFLEFIAAVN--------------LIMQEKMEQKL-KWYFKLYDADG 106
Query: 328 NGFISHDEF 336
NG I +E
Sbjct: 107 NGSIDKNEL 115
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 49.8 bits (119), Expect = 2e-07
Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 37/153 (24%)
Query: 51 FKEIDSDA--DKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
FK++ S D + +EE L + + IF D
Sbjct: 43 FKKLSSSIIDDGLIHKEEFQLALFRNRNRRN----------------LFADRIFDVFDVK 86
Query: 109 KNGFISHDEF---------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAA 159
+NG I EF S P H+++ FK D + REE+ E + + +
Sbjct: 87 RNGVIEFGEFVRSLGVFHPSAPVHEKVKF--AFKLYDLRQTGFIEREELKEMVVALLHES 144
Query: 160 EGSE--------VEEIFQHEDKDKNGFISHDEF 184
E V++ F D+ +G I DE+
Sbjct: 145 ELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
Score = 40.1 bits (94), Expect = 4e-04
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
FK D + REE+ K+MV A E + + + +V++ F D+ +
Sbjct: 117 FKLYDLRQTGFIEREEL-----KEMVVALLHESELVLSE--DMIEVMVDKAFVQADRKND 169
Query: 329 GFISHDEF 336
G I DE+
Sbjct: 170 GKIDIDEW 177
Score = 29.0 bits (65), Expect = 2.0
Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 49/175 (28%)
Query: 132 FKEIDSDA--DKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF----- 184
FK++ S D + +EE L + + IF D +NG I EF
Sbjct: 43 FKKLSSSIIDDGLIHKEEFQLALFRNRNRRN-LFADRIFDVFDVKRNGVIEFGEFVRSLG 101
Query: 185 ----SGPKHDELHDRDQPFTFTL----GVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYG 236
S P H+++ F F L G + + + + + E
Sbjct: 102 VFHPSAPVHEKVK-----FAFKLYDLRQTGFIEREELKEMVVALLHES------------ 144
Query: 237 DRGAGNVIPGGATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKK 291
E+ L +V F + D D ++ +E +++
Sbjct: 145 ----------------ELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL 183
Score = 27.4 bits (61), Expect = 5.0
Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 18/70 (25%)
Query: 269 FKEIDSDA--DKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 326
FK++ S D + +EE L + + IF D
Sbjct: 43 FKKLSSSIIDDGLIHKEEFQLALFRNRNRRN----------------LFADRIFDVFDVK 86
Query: 327 KNGFISHDEF 336
+NG I EF
Sbjct: 87 RNGVIEFGEF 96
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 50.4 bits (120), Expect = 2e-07
Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 25/149 (16%)
Query: 61 QLSREEVSEYLKK-QMVAAEGSEGAEDVKHMLE------EHDKLVEEIFQHEDKDKNGFI 113
+ +++E+ + + G + K + + +F D D NG I
Sbjct: 87 KFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAI 146
Query: 114 SHDEFSG------PKHDELGLPNVFKEIDSDADKQLSREEVSEYLK--KQMVAAEGSE-- 163
++F L F D + D +++EE+ +K M+
Sbjct: 147 HFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPIL 206
Query: 164 --------VEEIFQHEDKDKNGFISHDEF 184
VE FQ D++++G ++ DEF
Sbjct: 207 REDAPLEHVERFFQKMDRNQDGVVTIDEF 235
Score = 42.7 bits (100), Expect = 7e-05
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F D + D +++EE+ +K + EH VE FQ D++++
Sbjct: 171 FNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEH---VERFFQKMDRNQD 227
Query: 111 GFISHDEF 118
G ++ DEF
Sbjct: 228 GVVTIDEF 235
Score = 42.7 bits (100), Expect = 7e-05
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F D + D +++EE+ +K + EH VE FQ D++++
Sbjct: 171 FNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEH---VERFFQKMDRNQD 227
Query: 329 GFISHDEF 336
G ++ DEF
Sbjct: 228 GVVTIDEF 235
Score = 29.6 bits (66), Expect = 1.2
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 15/69 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+F D+D + + E+ L + H+KL + F D +K
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGL--------------SILLRGTVHEKL-KWAFNLYDINK 178
Query: 328 NGFISHDEF 336
+G I+ +E
Sbjct: 179 DGCITKEEM 187
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 48.8 bits (117), Expect = 3e-07
Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 38/164 (23%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAED-VKHMLEEHD------------ 95
NVF+ +D D +S E L++ + + V+ ++ D
Sbjct: 11 NVFQRVDKDRSGVISDTE----LQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 66
Query: 96 -------KLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQ 142
+ +F+ D+D +G I +E G + + + ++ D Q
Sbjct: 67 TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQ 126
Query: 143 LSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFIS--HDEF 184
++ ++ + + +IF+ D D++G+I ++++
Sbjct: 127 IAFDDFIQGCIVLQ------RLTDIFRRYDTDQDGWIQVSYEQY 164
Score = 41.8 bits (99), Expect = 8e-05
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 18/103 (17%)
Query: 91 LEEHDKLVEEIFQHEDKDKNGFISHDE---------FSGPKHDELGLPNVFKEIDSDADK 141
L + L +FQ DKD++G IS E ++ + + D +
Sbjct: 3 LPDQSFL-WNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRS--IISMFDRENKA 59
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
++ E + K + + +F+ D+D +G I +E
Sbjct: 60 GVNFSEFTGVWKYIT------DWQNVFRTYDRDNSGMIDKNEL 96
Score = 36.1 bits (84), Expect = 0.007
Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 24/90 (26%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAED-VKHMLEEHD------------ 313
NVF+ +D D +S E L++ + + V+ ++ D
Sbjct: 11 NVFQRVDKDRSGVISDTE----LQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 66
Query: 314 -------KLVEEIFQHEDKDKNGFISHDEF 336
+ +F+ D+D +G I +E
Sbjct: 67 TGVWKYITDWQNVFRTYDRDNSGMIDKNEL 96
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 48.9 bits (117), Expect = 4e-07
Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 25/141 (17%)
Query: 52 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 111
+ S D + E L+ Q + S GA ++ + F+ D+D +
Sbjct: 8 GPLGSHMDAV---DATMEKLRAQCL----SRGASGIQGL--------ARFFRQLDRDGSR 52
Query: 112 FISHDEF--------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE 163
+ DEF E V ++ D + L EE L+ M A +
Sbjct: 53 SLDADEFRQGLAKLGLVLDQAEAE--GVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAV 110
Query: 164 VEEIFQHEDKDKNGFISHDEF 184
+ F D+ +G ++ D+
Sbjct: 111 IAAAFAKLDRSGDGVVTVDDL 131
Score = 35.4 bits (82), Expect = 0.015
Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 23/91 (25%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKK-----------QMVAA---EGSEGAED--------V 305
F+++D D + L +E + L K + GS G D
Sbjct: 42 FFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGS-GTLDLEEFLRALR 100
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
M + + ++ F D+ +G ++ D+
Sbjct: 101 PPMSQAREAVIAAAFAKLDRSGDGVVTVDDL 131
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A
{Methanocaldococcus jannaschii} PDB: 3prd_A
Length = 231
Score = 49.0 bits (117), Expect = 5e-07
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 191 ELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNV 243
P G GQV+ G D+ + EM VGE+R++ +PP A+G R +
Sbjct: 36 NPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDPSKI 88
Score = 29.0 bits (65), Expect = 1.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 1 MCVGEKRKLTIPPALAYGDRGAGNV 25
M VGE+R++ +PP A+G R +
Sbjct: 64 MDVGEEREVVLPPEKAFGKRDPSKI 88
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 48.6 bits (116), Expect = 5e-07
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 17/105 (16%)
Query: 95 DKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQLSRE 146
+K VE++F+ D +K+G+I E+ G +L FK D D + + R
Sbjct: 51 NKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKL--RWYFKLYDVDGNGCIDRG 108
Query: 147 EVSEYLKKQMVAAEGSE-------VEEIFQHEDKDKNGFISHDEF 184
E+ +K +E +F D + +G +S +EF
Sbjct: 109 ELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
Score = 41.7 bits (98), Expect = 1e-04
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 18/110 (16%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
FK D D + + R E+ ++ A + + EE +F D + +
Sbjct: 94 FKLYDVDGNGCIDRGEL-----LNIIKAIRAINRCNEAMTAEEF---TNMVFDKIDINGD 145
Query: 111 GFISHDEF-SGPKHDE---------LGLPNVFKEIDSDADKQLSREEVSE 150
G +S +EF G + DE L L ++ K I +D + EE E
Sbjct: 146 GELSLEEFMEGVQKDEVLLDILTRSLDLTHIVKLIQNDGKNPHAPEEAEE 195
Score = 39.8 bits (93), Expect = 5e-04
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 8/68 (11%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
FK D D + + R E+ ++ A + + EE +F D + +
Sbjct: 94 FKLYDVDGNGCIDRGEL-----LNIIKAIRAINRCNEAMTAEEF---TNMVFDKIDINGD 145
Query: 329 GFISHDEF 336
G +S +EF
Sbjct: 146 GELSLEEF 153
Score = 34.8 bits (80), Expect = 0.019
Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 28/118 (23%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+F+ D + D + E L + + KL F+ D D
Sbjct: 57 MFETFDFNKDGYIDFMEYVAAL--------------SLVLKGKVDQKL-RWYFKLYDVDG 101
Query: 110 NGFISHDEF---------SGPKHDELGLP----NVFKEIDSDADKQLSREEVSEYLKK 154
NG I E ++ + VF +ID + D +LS EE E ++K
Sbjct: 102 NGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159
Score = 27.8 bits (62), Expect = 4.1
Identities = 14/69 (20%), Positives = 21/69 (30%), Gaps = 15/69 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+F+ D + D + E L + + KL F+ D D
Sbjct: 57 MFETFDFNKDGYIDFMEYVAAL--------------SLVLKGKVDQKL-RWYFKLYDVDG 101
Query: 328 NGFISHDEF 336
NG I E
Sbjct: 102 NGCIDRGEL 110
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 46.5 bits (110), Expect = 6e-07
Identities = 15/77 (19%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 43 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAE-DVKHMLEEHDKLVEEI 101
++ F D ++D L +E+ K++ + E D++ M EE ++ E +
Sbjct: 18 NRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHV 77
Query: 102 FQHEDKDKNGFISHDEF 118
++ D +++ ++ +EF
Sbjct: 78 MKNVDTNQDRLVTLEEF 94
Score = 46.5 bits (110), Expect = 6e-07
Identities = 15/77 (19%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 261 DQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAE-DVKHMLEEHDKLVEEI 319
++ F D ++D L +E+ K++ + E D++ M EE ++ E +
Sbjct: 18 NRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHV 77
Query: 320 FQHEDKDKNGFISHDEF 336
++ D +++ ++ +EF
Sbjct: 78 MKNVDTNQDRLVTLEEF 94
Score = 38.0 bits (88), Expect = 5e-04
Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 20/108 (18%)
Query: 83 GAEDVKHMLEEHDKLVEE------IFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEID 136
G+ +K + EE D L F D + +G + E EL V+ +
Sbjct: 1 GSHMLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEK--VYDPKN 58
Query: 137 SDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ D + EE E + ++ D +++ ++ +EF
Sbjct: 59 EEDDMREMEEERLRM------------REHVMKNVDTNQDRLVTLEEF 94
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 48.7 bits (116), Expect = 7e-07
Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 38/154 (24%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
FK ++ E E + +G +F D D N
Sbjct: 73 FKNECPS--GVVNEETFKEIYSQFF-----PQGDST---------TYAHFLFNAFDTDHN 116
Query: 111 GFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLK--KQMVAAE 160
G +S ++F G ++L F D + D +++EE+ + +K M+
Sbjct: 117 GAVSFEDFIKGLSILLRGTVQEKLNW--AFNLYDINKDGYITKEEMLDIMKAIYDMMGKC 174
Query: 161 GSE----------VEEIFQHEDKDKNGFISHDEF 184
VE FQ DK+K+G ++ DEF
Sbjct: 175 TYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
Score = 41.4 bits (97), Expect = 1e-04
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F D + D +++EE+ + +K + +H VE FQ DK+K+
Sbjct: 144 FNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQH---VETFFQKMDKNKD 200
Query: 329 GFISHDEF 336
G ++ DEF
Sbjct: 201 GVVTIDEF 208
Score = 34.1 bits (78), Expect = 0.042
Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 33/123 (26%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+F D+D + +S E+ + L + +KL F D +K
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGL--------------SILLRGTVQEKL-NWAFNLYDINK 151
Query: 110 NGFISHDEF---------SGPKHDELGLP---------NVFKEIDSDADKQLSREEVSEY 151
+G+I+ +E K L F+++D + D ++ +E E
Sbjct: 152 DGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIES 211
Query: 152 LKK 154
+K
Sbjct: 212 CQK 214
Score = 27.2 bits (60), Expect = 7.9
Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 15/69 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+F D+D + +S E+ + L + +KL F D +K
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGL--------------SILLRGTVQEKL-NWAFNLYDINK 151
Query: 328 NGFISHDEF 336
+G+I+ +E
Sbjct: 152 DGYITKEEM 160
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 47.9 bits (114), Expect = 7e-07
Identities = 34/154 (22%), Positives = 56/154 (36%), Gaps = 38/154 (24%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F + L++ E + K+ + E +F D DKN
Sbjct: 34 FFKDCPSG--HLNKSEFQKIYKQFF--------------PFGDPSAFAEYVFNVFDADKN 77
Query: 111 GFISHDEFS--------GPKHDELGLPNVFKEIDSDADKQLSREEVSEYLK------KQM 156
G+I EF G +D+L F+ D D + +S +E+ + M
Sbjct: 78 GYIDFKEFICALSVTSRGELNDKLIW--AFQLYDLDNNGLISYDEMLRIVDAIYKMVGSM 135
Query: 157 VAAEGSE------VEEIFQHEDKDKNGFISHDEF 184
V E V +IF DK+K+G ++ +EF
Sbjct: 136 VKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
Score = 42.9 bits (101), Expect = 4e-05
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F+ D D + +S +E+ + + + E+ V +IF DK+K+
Sbjct: 105 FQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKR---VNKIFNMMDKNKD 161
Query: 329 GFISHDEF 336
G ++ +EF
Sbjct: 162 GQLTLEEF 169
Score = 34.0 bits (78), Expect = 0.041
Identities = 32/123 (26%), Positives = 43/123 (34%), Gaps = 33/123 (26%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
VF D+D + + +E L V E +DKL FQ D D
Sbjct: 68 VFNVFDADKNGYIDFKEFICAL--------------SVTSRGELNDKL-IWAFQLYDLDN 112
Query: 110 NGFISHDEF--------------SGPKHDELGLP----NVFKEIDSDADKQLSREEVSEY 151
NG IS+DE DE +F +D + D QL+ EE E
Sbjct: 113 NGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEG 172
Query: 152 LKK 154
K+
Sbjct: 173 SKR 175
Score = 27.1 bits (60), Expect = 7.0
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 132 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSE-VEEIFQHEDKDKNGFISHDEFS 185
F + L++ E + K+ + S E +F D DKNG+I EF
Sbjct: 34 FFKDCPSG--HLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFI 86
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 48.4 bits (115), Expect = 7e-07
Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 18/108 (16%)
Query: 95 DKLVEEIFQHEDKDKNGFISHDEFSG------PKHDELGLPNVFKEIDSDADKQLSREEV 148
+F D + G + ++F L F D + D +++EE+
Sbjct: 88 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 147
Query: 149 SEYLK--KQMVAAEGSE----------VEEIFQHEDKDKNGFISHDEF 184
+ +K M+ V+ FQ DK+K+G ++ DEF
Sbjct: 148 MDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
Score = 42.3 bits (99), Expect = 9e-05
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F D + D +++EE+ + +K + +H V+ FQ DK+K+
Sbjct: 131 FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQH---VDVFFQKMDKNKD 187
Query: 111 GFISHDEF 118
G ++ DEF
Sbjct: 188 GIVTLDEF 195
Score = 42.3 bits (99), Expect = 9e-05
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F D + D +++EE+ + +K + +H V+ FQ DK+K+
Sbjct: 131 FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQH---VDVFFQKMDKNKD 187
Query: 329 GFISHDEF 336
G ++ DEF
Sbjct: 188 GIVTLDEF 195
Score = 34.2 bits (78), Expect = 0.041
Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 33/123 (26%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+F D+ + E+ L + H+KL F D +K
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTAL--------------SILLRGTVHEKL-RWTFNLYDINK 138
Query: 110 NGFISHDEF---------SGPKHDELGLP---------NVFKEIDSDADKQLSREEVSEY 151
+G+I+ +E K+ L F+++D + D ++ +E E
Sbjct: 139 DGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLES 198
Query: 152 LKK 154
++
Sbjct: 199 CQE 201
Score = 33.8 bits (77), Expect = 0.056
Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Query: 106 DKDKNGFISHDEFSGPKHDELGLPN-------VFKEIDSDADKQLSREEVSEYLKKQMVA 158
++ +G ++ + F + +F D+ + E+ L +
Sbjct: 62 NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRG 121
Query: 159 AEGSEVEEIFQHEDKDKNGFISHDEF 184
++ F D +K+G+I+ +E
Sbjct: 122 TVHEKLRWTFNLYDINKDGYINKEEM 147
Score = 28.4 bits (63), Expect = 3.0
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 15/69 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+F D+ + E+ L + H+KL F D +K
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTAL--------------SILLRGTVHEKL-RWTFNLYDINK 138
Query: 328 NGFISHDEF 336
+G+I+ +E
Sbjct: 139 DGYINKEEM 147
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 47.9 bits (114), Expect = 1e-06
Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 37/153 (24%)
Query: 51 FKEIDSDA--DKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
FK+I S D +++EE L K + +F D
Sbjct: 54 FKKISSAVIDDGLINKEEFQLALFKTNKKE----------------SLFADRVFDLFDTK 97
Query: 109 KNGFISHDEF---------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKK--QMV 157
NG + +EF + P D++ F+ D + R+EV + +
Sbjct: 98 HNGILGFEEFARALSVFHPNAPIDDKIHF--SFQLYDLKQQGFIERQEVKQMVVATLAES 155
Query: 158 AAEGSE------VEEIFQHEDKDKNGFISHDEF 184
+ +++ F+ D +G I +E+
Sbjct: 156 GMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEW 188
Score = 38.3 bits (89), Expect = 0.002
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F+ D + R+EV KQMV A +E ++K + ++++ F+ D +
Sbjct: 128 FQLYDLKQQGFIERQEV-----KQMVVATLAESGMNLKD--TVIEDIIDKTFEEADTKHD 180
Query: 329 GFISHDEF 336
G I +E+
Sbjct: 181 GKIDKEEW 188
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 47.1 bits (112), Expect = 1e-06
Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 18/108 (16%)
Query: 95 DKLVEEIFQHEDKDKNGFISHDEFSG------PKHDELGLPNVFKEIDSDADKQLSREEV 148
+F D + G + ++F L F D + D +++EE+
Sbjct: 55 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 114
Query: 149 SEYLK--KQMVAAEGSE----------VEEIFQHEDKDKNGFISHDEF 184
+ +K M+ V+ FQ DK+K+G ++ DEF
Sbjct: 115 MDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
Score = 40.6 bits (95), Expect = 2e-04
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F D + D +++EE+ + +K + +H V+ FQ DK+K+
Sbjct: 98 FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQH---VDVFFQKMDKNKD 154
Query: 111 GFISHDEF 118
G ++ DEF
Sbjct: 155 GIVTLDEF 162
Score = 40.6 bits (95), Expect = 2e-04
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F D + D +++EE+ + +K + +H V+ FQ DK+K+
Sbjct: 98 FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQH---VDVFFQKMDKNKD 154
Query: 329 GFISHDEF 336
G ++ DEF
Sbjct: 155 GIVTLDEF 162
Score = 37.9 bits (88), Expect = 0.002
Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Query: 106 DKDKNGFISHDEFSGPKHDELGLPN-------VFKEIDSDADKQLSREEVSEYLKKQMVA 158
++ +G ++ + F + +F D+ + E+ L +
Sbjct: 29 NEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRG 88
Query: 159 AEGSEVEEIFQHEDKDKNGFISHDEF 184
++ F D +K+G+I+ +E
Sbjct: 89 TVHEKLRWTFNLYDINKDGYINKEEM 114
Score = 29.8 bits (67), Expect = 0.92
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 15/69 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+F D+ + E+ L + H+KL F D +K
Sbjct: 61 LFNAFDTTQTGSVKFEDFVTAL--------------SILLRGTVHEKL-RWTFNLYDINK 105
Query: 328 NGFISHDEF 336
+G+I+ +E
Sbjct: 106 DGYINKEEM 114
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR
{Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 45.6 bits (109), Expect = 2e-06
Identities = 21/96 (21%), Positives = 31/96 (32%), Gaps = 17/96 (17%)
Query: 100 EIFQHEDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
+ F D+ G I P E+ EI+S ++ E+ +
Sbjct: 9 QAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEI------TEIESTLPAEVDMEQFLQV 62
Query: 152 LKKQMVAAEGSEVEEI---FQHEDKDKNGFISHDEF 184
L + + EE FQ DKD G I E
Sbjct: 63 LNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGEL 98
Score = 29.4 bits (67), Expect = 0.88
Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 12/67 (17%)
Query: 270 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 329
EI+S ++ E+ + L + E+ + FQ DKD G
Sbjct: 44 TEIESTLPAEVDMEQFLQVLNRPNGFDM-PGDPEEFV-----------KGFQVFDKDATG 91
Query: 330 FISHDEF 336
I E
Sbjct: 92 MIGVGEL 98
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 46.7 bits (111), Expect = 2e-06
Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 28/135 (20%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+F+ D++ D + E L + KL + F+ DKD+
Sbjct: 64 MFRAFDTNGDNTIDFLEYVAALN--------------LVLRGTLEHKL-KWTFKIYDKDR 108
Query: 110 NGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQ 169
NG I E L ++ + I E + K V+ IF
Sbjct: 109 NGCIDRQE----------LLDIVESIYKLKKACSVEVEAEQQGKLLTPEEV---VDRIFL 155
Query: 170 HEDKDKNGFISHDEF 184
D++ +G +S +EF
Sbjct: 156 LVDENGDGQLSLNEF 170
Score = 46.3 bits (110), Expect = 3e-06
Identities = 20/110 (18%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 82 EGAEDVKHMLEEHDKLVEEIFQH-EDKDKNGFISHDEF------SGPKHDELGLPNVFKE 134
E AE+ + ++E ++ ++ +G + EF + + +F+
Sbjct: 8 EEAEENGAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRA 67
Query: 135 IDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
D++ D + E L + +++ F+ DKD+NG I E
Sbjct: 68 FDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQEL 117
Score = 42.9 bits (101), Expect = 4e-05
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 269 FKEIDSDADKQLSREEVSEYLK--KQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 326
FK D D + + R+E+ + ++ ++ A E + + L +++V+ IF D++
Sbjct: 101 FKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDEN 160
Query: 327 KNGFISHDEF 336
+G +S +EF
Sbjct: 161 GDGQLSLNEF 170
Score = 32.1 bits (73), Expect = 0.17
Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 28/165 (16%)
Query: 135 IDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF--------SG 186
++ L E + K VE +F+ D + + I E+ G
Sbjct: 32 LEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRG 91
Query: 187 PKHDELHDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIPPALAYGDRGAGNVIPG 246
+L +TF K +D+ C+ + L I ++ + +
Sbjct: 92 TLEHKLK-----WTF--------KIYDKDRNG-CIDRQELLDIVESIYKLKKACSVEVEA 137
Query: 247 GATLTFEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKK 291
E + + + +F +D + D QLS E E ++
Sbjct: 138 ------EQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 176
Score = 29.4 bits (66), Expect = 1.3
Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 15/69 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+F+ D++ D + E L + KL + F+ DKD+
Sbjct: 64 MFRAFDTNGDNTIDFLEYVAALN--------------LVLRGTLEHKL-KWTFKIYDKDR 108
Query: 328 NGFISHDEF 336
NG I E
Sbjct: 109 NGCIDRQEL 117
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 46.0 bits (110), Expect = 3e-06
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 15/106 (14%)
Query: 88 KHMLEEHDKLVEEI---FQHEDKDKNGFISHDEF------SGPKHDELGLPNVFKEIDSD 138
+ M + + EEI F+ DKD NG+IS E G K + + + +E D D
Sbjct: 75 RKMKDTDSE--EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 139 ADKQLSREEVSEYLKKQMVAAEGSEVEE----IFQHEDKDKNGFIS 180
D Q++ EE + + + + +E + K F
Sbjct: 133 GDGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSV 178
Score = 41.4 bits (98), Expect = 1e-04
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDADKQL 143
EE +E F DKD +G I+ E P EL ++ E+D+D + +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTI 64
Query: 144 SREEVSEYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
E + ++M + E+ E F+ DKD NG+IS E
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 106
Score = 31.0 bits (71), Expect = 0.31
Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 14/80 (17%)
Query: 256 LLSIGDQVTTTNV---FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEH 312
+ ++G+++T V +E D D D Q++ EE + + + + E ++
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVIR------ 163
Query: 313 DKLVEEIFQHEDKDKNGFIS 332
+ K F
Sbjct: 164 -----NKIRAIGKMARVFSV 178
Score = 26.7 bits (60), Expect = 9.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 306 KHMLEEHDKLVEEI---FQHEDKDKNGFISHDEF 336
+ M + + EEI F+ DKD NG+IS E
Sbjct: 75 RKMKDTDSE--EEIREAFRVFDKDGNGYISAAEL 106
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural
genomics, seattle S genomics center for infectious
disease, ssgcid; 1.90A {Entamoeba histolytica} PDB:
3sia_A 3sib_A
Length = 220
Score = 46.7 bits (111), Expect = 3e-06
Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 12/99 (12%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSR 145
+ + + F D+D++G + +E G + + + D+D + +S
Sbjct: 47 LDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISF 106
Query: 146 EEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
E K +F + ++G + E
Sbjct: 107 YEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEI 139
Score = 42.1 bits (99), Expect = 1e-04
Identities = 12/152 (7%), Positives = 34/152 (22%), Gaps = 48/152 (31%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLK-----------KQMVAA-----EGSEGAEDVKHMLE 92
F +D D L E+ +M+ G + M +
Sbjct: 55 QWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYK 114
Query: 93 EHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYL 152
+ +F + ++G + E + +++ +++
Sbjct: 115 FMELA-YNLFVMNARARSGTLEPHE----------ILPALQQL---------GFYINQRT 154
Query: 153 KKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ F + +
Sbjct: 155 SLLLHRL------------FARGMAFCDLNCW 174
Score = 39.8 bits (93), Expect = 5e-04
Identities = 11/86 (12%), Positives = 23/86 (26%), Gaps = 17/86 (19%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLK-----------KQMVAA-----EGSEGAEDVKHMLE 310
F +D D L E+ +M+ G + M +
Sbjct: 55 QWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYK 114
Query: 311 EHDKLVEEIFQHEDKDKNGFISHDEF 336
+ +F + ++G + E
Sbjct: 115 FMELA-YNLFVMNARARSGTLEPHEI 139
Score = 37.1 bits (86), Expect = 0.004
Identities = 14/64 (21%), Positives = 20/64 (31%)
Query: 121 PKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFIS 180
P + F +D D L E+ + + + D D NG IS
Sbjct: 46 PLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHIS 105
Query: 181 HDEF 184
EF
Sbjct: 106 FYEF 109
Score = 28.6 bits (64), Expect = 2.5
Identities = 5/26 (19%), Positives = 14/26 (53%)
Query: 160 EGSEVEEIFQHEDKDKNGFISHDEFS 185
+ + + + F D+D++G + +E
Sbjct: 49 QYTRIYQWFMGVDRDRSGTLEINELM 74
Score = 28.2 bits (63), Expect = 3.3
Identities = 5/28 (17%), Positives = 13/28 (46%)
Query: 310 EEHDKLVEEIFQHEDKDKNGFISHDEFS 337
+ + + F D+D++G + +E
Sbjct: 47 LDQYTRIYQWFMGVDRDRSGTLEINELM 74
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 46.0 bits (109), Expect = 4e-06
Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 38/154 (24%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F LS EE + G K E +F+ D + +
Sbjct: 34 FLRDCPS--GHLSMEEFKKIYGNF-----FPYGDAS---------KFAEHVFRTFDANGD 77
Query: 111 GFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS 162
G I EF G +L F D D + +S+ E+ E ++
Sbjct: 78 GTIDFREFIIALSVTSRGKLEQKLKW--AFSMYDLDGNGYISKAEMLEIVQAIYKMVSSV 135
Query: 163 E------------VEEIFQHEDKDKNGFISHDEF 184
E+IF+ D +++G +S +EF
Sbjct: 136 MKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
Score = 41.0 bits (96), Expect = 2e-04
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F D D + +S+ E+ E ++ + + E+ E+IF+ D ++
Sbjct: 104 AFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKR---TEKIFRQMDTNR 160
Query: 110 NGFISHDEF 118
+G +S +EF
Sbjct: 161 DGKLSLEEF 169
Score = 41.0 bits (96), Expect = 2e-04
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
F D D + +S+ E+ E ++ + + E+ E+IF+ D ++
Sbjct: 104 AFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKR---TEKIFRQMDTNR 160
Query: 328 NGFISHDEF 336
+G +S +EF
Sbjct: 161 DGKLSLEEF 169
Score = 31.4 bits (71), Expect = 0.25
Identities = 27/123 (21%), Positives = 41/123 (33%), Gaps = 33/123 (26%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
VF+ D++ D + E L V + KL + F D D
Sbjct: 68 VFRTFDANGDGTIDFREFIIAL--------------SVTSRGKLEQKL-KWAFSMYDLDG 112
Query: 110 NGFISHDEF--------------SGPKHDELGLP----NVFKEIDSDADKQLSREEVSEY 151
NG+IS E DE +F+++D++ D +LS EE
Sbjct: 113 NGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRG 172
Query: 152 LKK 154
K
Sbjct: 173 AKS 175
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 45.3 bits (108), Expect = 4e-06
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 100 EIFQHEDKDKNGFISHDEFS--GPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMV 157
+ F+ D D +G +S +EF + V D+D + ++ +E E + + V
Sbjct: 10 KRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSV 69
Query: 158 AAEGSE-VEEIFQHEDKDKNGFISHDEF 184
+ + + F+ D DK+G+IS+ E
Sbjct: 70 KGDKEQKLRFAFRIYDMDKDGYISNGEL 97
Score = 40.7 bits (96), Expect = 1e-04
Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 43/152 (28%)
Query: 51 FKEIDSDADKQLSREEV-------SEYLKKQMVAAEGSEGAEDV-----------KHMLE 92
FK++D D LS EE L ++++ ++G +V +
Sbjct: 12 FKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG 71
Query: 93 EHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYL 152
+ ++ + F+ D DK+G+IS+ E L V K + + +
Sbjct: 72 DKEQKLRFAFRIYDMDKDGYISNGE----------LFQVLKM--------MVGNNLKDTQ 113
Query: 153 KKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+Q+ V++ + DKD +G IS +EF
Sbjct: 114 LQQI-------VDKTIINADKDGDGRISFEEF 138
Score = 33.7 bits (78), Expect = 0.034
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F+ D D D +S E+ Q++ +D + ++V++ + DKD +
Sbjct: 81 FRIYDMDKDGYISNGEL-----FQVLKMMVGNNLKD-----TQLQQIVDKTIINADKDGD 130
Query: 329 GFISHDEF 336
G IS +EF
Sbjct: 131 GRISFEEF 138
Score = 32.2 bits (74), Expect = 0.11
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 18/86 (20%)
Query: 269 FKEIDSDADKQLSREEV-------SEYLKKQMVAAEGSEGAEDV-----------KHMLE 310
FK++D D LS EE L ++++ ++G +V +
Sbjct: 12 FKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG 71
Query: 311 EHDKLVEEIFQHEDKDKNGFISHDEF 336
+ ++ + F+ D DK+G+IS+ E
Sbjct: 72 DKEQKLRFAFRIYDMDKDGYISNGEL 97
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 45.3 bits (108), Expect = 6e-06
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 10/106 (9%)
Query: 87 VKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSD 138
KH+ + + IF D D +G +S E ++ V ++IDS+
Sbjct: 48 AKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIH--QVLRDIDSN 105
Query: 139 ADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
A Q+ + + + F+ D D NG IS +E
Sbjct: 106 ASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEEL 151
Score = 42.6 bits (101), Expect = 5e-05
Identities = 29/156 (18%), Positives = 49/156 (31%), Gaps = 51/156 (32%)
Query: 51 FKEIDSDADKQLSREEVSEYLKK-----------QMVAA---EGSEGAED--------VK 88
F +D D LS +E+ + LKK Q++ S G +
Sbjct: 63 FIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNAS-GQIHYTDFLAATID 121
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEV 148
++ F+ D D NG IS +E L +F D + +
Sbjct: 122 KQTYLKKEVCLIPFKFFDIDGNGKISVEE----------LKRIFGRDDIE-------NPL 164
Query: 149 SEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ ++ + Q D + +G I EF
Sbjct: 165 ID-----------KAIDSLLQEVDLNGDGEIDFHEF 189
Score = 34.1 bits (79), Expect = 0.037
Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 23/90 (25%)
Query: 269 FKEIDSDADKQLSREEVSEYLKK-----------QMVAA---EGSEGAED--------VK 306
F +D D LS +E+ + LKK Q++ S G +
Sbjct: 63 FIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNAS-GQIHYTDFLAATID 121
Query: 307 HMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
++ F+ D D NG IS +E
Sbjct: 122 KQTYLKKEVCLIPFKFFDIDGNGKISVEEL 151
Score = 32.9 bits (76), Expect = 0.088
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 13/68 (19%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
FK D D + ++S EE LK+ + D + ++ + Q D + +
Sbjct: 135 FKFFDIDGNGKISVEE----LKRIFGRDDIENPLID-----KA----IDSLLQEVDLNGD 181
Query: 329 GFISHDEF 336
G I EF
Sbjct: 182 GEIDFHEF 189
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 45.2 bits (107), Expect = 7e-06
Identities = 32/154 (20%), Positives = 52/154 (33%), Gaps = 38/154 (24%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F + QL + K+ + K +F D++K+
Sbjct: 34 FIKDCPSG--QLDAAGFQKIYKQFF--------------PFGDPTKFATFVFNVFDENKD 77
Query: 111 GFISHDEFS--------GPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKK--QMVAAE 160
G I EF G ++L FK D D D ++R E+ + + QMV
Sbjct: 78 GRIEFSEFIQALSVTSRGTLDEKLRW--AFKLYDLDNDGYITRNEMLDIVDAIYQMVGNT 135
Query: 161 GSE----------VEEIFQHEDKDKNGFISHDEF 184
V+ IF DK+ +G ++ EF
Sbjct: 136 VELPEEENTPEKRVDRIFAMMDKNADGKLTLQEF 169
Score = 40.6 bits (95), Expect = 2e-04
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
FK D D D ++R E+ + + + + ++ E+ V+ IF DK+ +
Sbjct: 105 FKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKR---VDRIFAMMDKNAD 161
Query: 329 GFISHDEF 336
G ++ EF
Sbjct: 162 GKLTLQEF 169
Score = 29.8 bits (67), Expect = 0.97
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 33/123 (26%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
VF D + D ++ E + L V +KL F+ D D
Sbjct: 68 VFNVFDENKDGRIEFSEFIQAL--------------SVTSRGTLDEKL-RWAFKLYDLDN 112
Query: 110 NGFISHDEF--------------SGPKHDELGLP----NVFKEIDSDADKQLSREEVSEY 151
+G+I+ +E +E +F +D +AD +L+ +E E
Sbjct: 113 DGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEG 172
Query: 152 LKK 154
K
Sbjct: 173 SKA 175
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 44.8 bits (106), Expect = 1e-05
Identities = 28/162 (17%), Positives = 49/162 (30%), Gaps = 48/162 (29%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F +D + LSRE+ + + + L + I +
Sbjct: 35 FTSLDKGENGTLSREDFQRIPELAI-------------------NPLGDRIINAFFSEGE 75
Query: 111 GFISHDEF----------------------SGPKHDELGLPNVFKEIDSDADKQLSREEV 148
++ F L F+ D D D ++SR+E+
Sbjct: 76 DQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDEL 135
Query: 149 SEYLKKQMVAAEGSE------VEEIFQHEDKDKNGFISHDEF 184
+ L+ MV S+ + Q D+D + IS EF
Sbjct: 136 LQVLR-MMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176
Score = 38.6 bits (90), Expect = 0.001
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F+ D D D ++SR+E+ + L+ MV S+ E+ + + Q D+D +
Sbjct: 119 FRLYDLDKDDKISRDELLQVLR-MMVGVNISD---------EQLGSIADRTIQEADQDGD 168
Query: 329 GFISHDEF 336
IS EF
Sbjct: 169 SAISFTEF 176
Score = 32.1 bits (73), Expect = 0.19
Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 7/93 (7%)
Query: 249 TLTFEVELLSI---GDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAA--EGSEGAE 303
TL+ E + I + S+ + Q++ L E S+
Sbjct: 45 TLSRE-DFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVN 103
Query: 304 DVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ + +KL F+ D DK+ IS DE
Sbjct: 104 GPEPLNSRSNKL-HFAFRLYDLDKDDKISRDEL 135
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 42.9 bits (102), Expect = 1e-05
Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 7/87 (8%)
Query: 105 EDKDKNGFISHDEF---SGPKHD-ELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAE 160
G + F G K + + VF+ +D D + EE+ LK
Sbjct: 16 SAFKDPGTFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR 75
Query: 161 G---SEVEEIFQHEDKDKNGFISHDEF 184
+E + + D D +G I DEF
Sbjct: 76 DLNDTETKALLAAGDSDHDGKIGADEF 102
Score = 30.2 bits (69), Expect = 0.27
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDE 335
K + V+E+F+ DKD++GFI +E
Sbjct: 36 KGKTDAQ---VKEVFEILDKDQSGFIEEEE 62
Score = 29.1 bits (66), Expect = 0.71
Identities = 16/69 (23%), Positives = 23/69 (33%), Gaps = 12/69 (17%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
VF+ +D D + EE+ LK E + + D D
Sbjct: 46 VFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTE------------TKALLAAGDSDH 93
Query: 328 NGFISHDEF 336
+G I DEF
Sbjct: 94 DGKIGADEF 102
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 43.4 bits (103), Expect = 1e-05
Identities = 26/140 (18%), Positives = 45/140 (32%), Gaps = 43/140 (30%)
Query: 54 IDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFI 113
++S AD Q E+V E + +K G I
Sbjct: 1 MESVADIQQLEEKVDES----------------------------DVRIYFNEKSSGGKI 32
Query: 114 SHDEFSG--------PKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEG-SEV 164
S D S P + K+I L+ E+ EYL + + E+
Sbjct: 33 SIDNASYNARKLGLAPSSIDE------KKIKELYGDNLTYEQYLEYLSICVHDKDNVEEL 86
Query: 165 EEIFQHEDKDKNGFISHDEF 184
++F H D + G+++ +
Sbjct: 87 IKMFAHFDNNCTGYLTKSQM 106
Score = 28.3 bits (64), Expect = 2.0
Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 14/67 (20%)
Query: 270 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 329
K+I L+ E+ EYL + +++ + + ++F H D + G
Sbjct: 54 KKIKELYGDNLTYEQYLEYLSICVHD--------------KDNVEELIKMFAHFDNNCTG 99
Query: 330 FISHDEF 336
+++ +
Sbjct: 100 YLTKSQM 106
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 44.1 bits (104), Expect = 2e-05
Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 34/152 (22%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F QL+RE+ + K+ + +F DKD N
Sbjct: 34 FLRDCPS--GQLAREDFVKIYKQFF--------------PFGSPEDFANHLFTVFDKDNN 77
Query: 111 GFISHDEFS------GPKHDELGLPNVFKEIDSDADKQLSREEVSEYLK------KQMVA 158
GFI +EF E L F+ D + D ++ +E+ + MV
Sbjct: 78 GFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVT 137
Query: 159 AEGSE------VEEIFQHEDKDKNGFISHDEF 184
E V++IF+ DK+++G+I+ DEF
Sbjct: 138 LNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 41.8 bits (98), Expect = 1e-04
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
F+ D + D ++ +E+ + + + E V++IF+ DK+
Sbjct: 103 WAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMR---VKKIFKLMDKN 159
Query: 109 KNGFISHDEF 118
++G+I+ DEF
Sbjct: 160 EDGYITLDEF 169
Score = 41.8 bits (98), Expect = 1e-04
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 326
F+ D + D ++ +E+ + + + E V++IF+ DK+
Sbjct: 103 WAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMR---VKKIFKLMDKN 159
Query: 327 KNGFISHDEF 336
++G+I+ DEF
Sbjct: 160 EDGYITLDEF 169
Score = 31.7 bits (72), Expect = 0.20
Identities = 23/123 (18%), Positives = 38/123 (30%), Gaps = 33/123 (26%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+F D D + + EE L +KL F+ D +
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVL--------------STTSRGTLEEKL-SWAFELYDLNH 112
Query: 110 NGFISHDEF--------------SGPKHDELGLP----NVFKEIDSDADKQLSREEVSEY 151
+G+I+ DE DE +FK +D + D ++ +E E
Sbjct: 113 DGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREG 172
Query: 152 LKK 154
K
Sbjct: 173 SKV 175
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural
genomics, protein structure initiative; NMR {Arabidopsis
thaliana} SCOP: a.39.1.5
Length = 67
Score = 40.9 bits (97), Expect = 2e-05
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
VF++ D + D +LS +E E ++ + F+ D D NG ++ DEF
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
Score = 31.7 bits (73), Expect = 0.039
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 15/69 (21%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
VF++ D + D +LS +E E + E+ K EEI D D
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAF-----SPYFTQ------EDIVKFFEEI----DVDG 50
Query: 110 NGFISHDEF 118
NG ++ DEF
Sbjct: 51 NGELNADEF 59
Score = 31.7 bits (73), Expect = 0.039
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 15/69 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
VF++ D + D +LS +E E + E+ K EEI D D
Sbjct: 6 VFEKFDKNKDGKLSLDEFREVALAF-----SPYFTQ------EDIVKFFEEI----DVDG 50
Query: 328 NGFISHDEF 336
NG ++ DEF
Sbjct: 51 NGELNADEF 59
Score = 30.9 bits (71), Expect = 0.072
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 162 SEVEEIFQHEDKDKNGFISHDEF 184
S + +F+ DK+K+G +S DEF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEF 23
Score = 27.5 bits (62), Expect = 1.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 317 EEIFQHEDKDKNGFISHDEF 336
+ +F+ DK+K+G +S DEF
Sbjct: 4 KRVFEKFDKNKDGKLSLDEF 23
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A;
EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 42.1 bits (99), Expect = 2e-05
Identities = 8/61 (13%), Positives = 23/61 (37%)
Query: 124 DELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
+ F+ D+ +SREE +++ + + ++ + G + + +
Sbjct: 22 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPD 81
Query: 184 F 184
F
Sbjct: 82 F 82
Score = 32.8 bits (75), Expect = 0.034
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 305 VKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+ + H + + F++ D K IS +EF
Sbjct: 15 LHKAVTSHYHAITQEFENFDTMKTNTISREEF 46
Score = 32.5 bits (74), Expect = 0.042
Identities = 9/70 (12%), Positives = 22/70 (31%), Gaps = 15/70 (21%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
F+ D+ +SREE + + D+ + ++ +
Sbjct: 28 QEFENFDTMKTNTISREEFRAICN---------------RRVQILTDEQFDRLWNEMPVN 72
Query: 109 KNGFISHDEF 118
G + + +F
Sbjct: 73 AKGRLKYPDF 82
Score = 32.5 bits (74), Expect = 0.042
Identities = 9/70 (12%), Positives = 22/70 (31%), Gaps = 15/70 (21%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 326
F+ D+ +SREE + + D+ + ++ +
Sbjct: 28 QEFENFDTMKTNTISREEFRAICNR---------------RVQILTDEQFDRLWNEMPVN 72
Query: 327 KNGFISHDEF 336
G + + +F
Sbjct: 73 AKGRLKYPDF 82
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 41.6 bits (98), Expect = 2e-05
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 103 QHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS 162
H +N + + G + L +VF D++ +L REE + + +
Sbjct: 6 HHSSGRENLYFQGADGDGEELARLR--SVFAACDANRSGRLEREEFRALCTE--LRVRPA 61
Query: 163 EVEEIFQHEDKDKNGFISHDEF 184
+ E +FQ D D++G I+ EF
Sbjct: 62 DAEAVFQRLDADRDGAITFQEF 83
Score = 41.6 bits (98), Expect = 2e-05
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLP-----NVFKEIDSDADKQLSRE 146
E + +F D +++G + +EF EL + VF+ +D+D D ++ +
Sbjct: 23 GEELARLRSVFAACDANRSGRLEREEF-RALCTELRVRPADAEAVFQRLDADRDGAITFQ 81
Query: 147 EVSEYLKKQM 156
E + +
Sbjct: 82 EFARGFLGSL 91
Score = 35.0 bits (81), Expect = 0.004
Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 17/69 (24%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
VF D++ +L REE + L E +FQ D D+
Sbjct: 32 VFAACDANRSGRLEREEFRALCTE-----------------LRVRPADAEAVFQRLDADR 74
Query: 110 NGFISHDEF 118
+G I+ EF
Sbjct: 75 DGAITFQEF 83
Score = 35.0 bits (81), Expect = 0.004
Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 17/69 (24%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
VF D++ +L REE + L E +FQ D D+
Sbjct: 32 VFAACDANRSGRLEREEFRALCTE-----------------LRVRPADAEAVFQRLDADR 74
Query: 328 NGFISHDEF 336
+G I+ EF
Sbjct: 75 DGAITFQEF 83
Score = 30.4 bits (69), Expect = 0.19
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 310 EEHDKLVEEIFQHEDKDKNGFISHDEF 336
E + +F D +++G + +EF
Sbjct: 23 GEELARLRSVFAACDANRSGRLEREEF 49
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 145
Score = 42.9 bits (102), Expect = 2e-05
Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 15/95 (15%)
Query: 100 EIFQHEDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
E FQ DKD +G +S +E P + EL + ++++ +
Sbjct: 9 ECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAEL--NTIKGQLNAK---EFDLATFKTV 63
Query: 152 LKKQMVAAEGSEVE--EIFQHEDKDKNGFISHDEF 184
+K + E + F+ DK+ NG I E
Sbjct: 64 YRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAEL 98
Score = 34.4 bits (80), Expect = 0.017
Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 32/99 (32%)
Query: 88 KHMLEEHDKLVE--EIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSR 145
K + ++ E + F+ DK+ NG I E L + +
Sbjct: 66 KPIKTPTEQSKEMLDAFRALDKEGNGTIQEAE----------LRQLLLNLG--------- 106
Query: 146 EEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ ++ SEVEE+ + +G I+++ F
Sbjct: 107 DALTS-----------SEVEELMKEVSVSGDGAINYESF 134
Score = 27.5 bits (62), Expect = 4.1
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 306 KHMLEEHDKLVE--EIFQHEDKDKNGFISHDEF 336
K + ++ E + F+ DK+ NG I E
Sbjct: 66 KPIKTPTEQSKEMLDAFRALDKEGNGTIQEAEL 98
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 42.9 bits (102), Expect = 3e-05
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
Query: 87 VKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSD 138
+ + EE ++E+F D DK+G I+ +E + K E+ ++ + D D
Sbjct: 18 AESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEIL--DLMQAADVD 75
Query: 139 ADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
+ +E + F + DKD +G+I+ DE
Sbjct: 76 NSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Score = 39.4 bits (93), Expect = 5e-04
Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 63/161 (39%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAE-DVKHMLEEHDK------------ 96
+F ID+D Q++ EE+ LK+ G+ E ++ +++ D
Sbjct: 32 MFNMIDADKSGQITFEELKAGLKRV-----GANLKESEILDLMQAADVDNSGTIDYKEFI 86
Query: 97 -------------LVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQL 143
+ F + DKD +G+I+ DE L +E +
Sbjct: 87 AATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE----------LQQACEEFGVEDV--- 133
Query: 144 SREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+EE+ + D+D +G I ++EF
Sbjct: 134 -------------------RIEELMRDVDQDNDGRIDYNEF 155
Score = 37.9 bits (89), Expect = 0.002
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 127 GLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
GL +F ID+D Q++ EE+ LK+ + SE+ ++ Q D D +G I + EF
Sbjct: 28 GLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEF 85
Score = 30.9 bits (71), Expect = 0.28
Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 31/94 (32%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAE-DVKHMLEEHDK------------ 314
+F ID+D Q++ EE+ LK+ G+ E ++ +++ D
Sbjct: 32 MFNMIDADKSGQITFEELKAGLKRV-----GANLKESEILDLMQAADVDNSGTIDYKEFI 86
Query: 315 -------------LVEEIFQHEDKDKNGFISHDE 335
+ F + DKD +G+I+ DE
Sbjct: 87 AATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Score = 29.0 bits (66), Expect = 1.4
Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 302 AEDVKHMLEEH---DKLVEEIFQHEDKDKNGFISHDEF 336
++++ EE D +EE+ + D+D +G I ++EF
Sbjct: 118 PDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEF 155
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 42.9 bits (101), Expect = 4e-05
Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 22/125 (17%)
Query: 80 GSEGAEDVKHMLE-EHDKLVEEIFQHEDKDK-NGFISHDEF---------SGPKHDELGL 128
E + + E + + E I + +S ++F + +
Sbjct: 74 AQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHY 133
Query: 129 PNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE---------VEEIFQHEDKDKNGFI 179
F+ D D D L+RE++S + E + ++ I + D D++G I
Sbjct: 134 --AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTI 191
Query: 180 SHDEF 184
+ EF
Sbjct: 192 NLSEF 196
Score = 41.8 bits (98), Expect = 1e-04
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F+ D D D L+RE++S + + E +L++ I + D D++
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNC-LTGEGEDTRLSA-----SEMKQLIDNILEESDIDRD 188
Query: 111 GFISHDEF 118
G I+ EF
Sbjct: 189 GTINLSEF 196
Score = 41.8 bits (98), Expect = 1e-04
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F+ D D D L+RE++S + + E +L++ I + D D++
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNC-LTGEGEDTRLSA-----SEMKQLIDNILEESDIDRD 188
Query: 329 GFISHDEF 336
G I+ EF
Sbjct: 189 GTINLSEF 196
Score = 29.1 bits (65), Expect = 1.5
Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 15/72 (20%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-----------SGPKHDELGLP----NVFKEIDSDADKQ 142
F+ D D +G ++ ++ + + N+ +E D D D
Sbjct: 131 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 190
Query: 143 LSREEVSEYLKK 154
++ E + +
Sbjct: 191 INLSEFQHVISR 202
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 42.4 bits (100), Expect = 5e-05
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 21/108 (19%)
Query: 96 KLVEEIFQHEDKDK-NGFISHDEF---------SGPKHDELGLPNVFKEIDSDADKQLSR 145
E I + +S ++F + + F+ D D D L+R
Sbjct: 60 PFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHY--AFRIFDFDDDGTLNR 117
Query: 146 EEVSEYLKKQMVAAEGSE---------VEEIFQHEDKDKNGFISHDEF 184
E++S + E + ++ I + D D++G I+ EF
Sbjct: 118 EDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 165
Score = 40.9 bits (96), Expect = 2e-04
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F+ D D D L+RE++S + + E +L++ I + D D++
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVN-CLTGEGEDTRLSA-----SEMKQLIDNILEESDIDRD 157
Query: 111 GFISHDEF 118
G I+ EF
Sbjct: 158 GTINLSEF 165
Score = 40.9 bits (96), Expect = 2e-04
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F+ D D D L+RE++S + + E +L++ I + D D++
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVN-CLTGEGEDTRLSA-----SEMKQLIDNILEESDIDRD 157
Query: 329 GFISHDEF 336
G I+ EF
Sbjct: 158 GTINLSEF 165
Score = 32.0 bits (73), Expect = 0.14
Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 16/75 (21%)
Query: 95 DKLVEEIFQHEDKDKNGFISHDEF-----------SGPKHDELGLP----NVFKEIDSDA 139
K F+ D D +G ++ ++ + + N+ +E D D
Sbjct: 98 IKS-HYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDR 156
Query: 140 DKQLSREEVSEYLKK 154
D ++ E + +
Sbjct: 157 DGTINLSEFQHVISR 171
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 41.1 bits (97), Expect = 5e-05
Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 27/96 (28%)
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEV 148
M ++ ++EIF+ D D++GFI DE L + +S A +
Sbjct: 34 GMSKKSSSQLKEIFRILDNDQSGFIEEDE----------LKYFLQRFESGA------RVL 77
Query: 149 SEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ SE + D D +G I +EF
Sbjct: 78 TA-----------SETKTFLAAADHDGDGKIGAEEF 102
Score = 32.2 bits (74), Expect = 0.063
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 307 HMLEEHDKLVEEIFQHEDKDKNGFISHDE 335
M ++ ++EIF+ D D++GFI DE
Sbjct: 34 GMSKKSSSQLKEIFRILDNDQSGFIEEDE 62
Score = 30.3 bits (69), Expect = 0.24
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 12/69 (17%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+F+ +D+D + +E+ +L++ A A + K L D D
Sbjct: 46 IFRILDNDQSGFIEEDELKYFLQRFESGARVLT-ASETKTFLAAADH-----------DG 93
Query: 328 NGFISHDEF 336
+G I +EF
Sbjct: 94 DGKIGAEEF 102
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 42.7 bits (100), Expect = 5e-05
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F D D + +S+ EV E + + E + + +K E+I+++ K+ +
Sbjct: 113 FSLYDVDGNGTISKNEVLE-IVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDD 171
Query: 111 GFISHDEF 118
++ EF
Sbjct: 172 DKLTEKEF 179
Score = 42.7 bits (100), Expect = 5e-05
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F D D + +S+ EV E + + E + + +K E+I+++ K+ +
Sbjct: 113 FSLYDVDGNGTISKNEVLE-IVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDD 171
Query: 329 GFISHDEF 336
++ EF
Sbjct: 172 DKLTEKEF 179
Score = 41.5 bits (97), Expect = 1e-04
Identities = 18/150 (12%), Positives = 45/150 (30%), Gaps = 34/150 (22%)
Query: 55 DSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFIS 114
++++++ K + + +F+ D + +G +
Sbjct: 44 KDCPTGRITQQQFQSIYAKFF--------------PDTDPKAYAQHVFRSFDSNLDGTLD 89
Query: 115 HDEFSG------PKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE----- 163
E+ L F D D + +S+ EV E + +
Sbjct: 90 FKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLP 149
Query: 164 ---------VEEIFQHEDKDKNGFISHDEF 184
E+I+++ K+ + ++ EF
Sbjct: 150 DDENTPEKRAEKIWKYFGKNDDDKLTEKEF 179
Score = 31.1 bits (70), Expect = 0.37
Identities = 27/125 (21%), Positives = 40/125 (32%), Gaps = 35/125 (28%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
VF+ DS+ D L +E L + + + KL E F D D
Sbjct: 76 VFRSFDSNLDGTLDFKEYVIAL--------------HMTTAGKTNQKL-EWAFSLYDVDG 120
Query: 110 NGFISHDEF---------SGPKHDELGLP-----------NVFKEIDSDADKQLSREEVS 149
NG IS +E D LP ++K + D +L+ +E
Sbjct: 121 NGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFI 180
Query: 150 EYLKK 154
E
Sbjct: 181 EGTLA 185
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 40.3 bits (95), Expect = 1e-04
Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 28/98 (28%)
Query: 87 VKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSRE 146
V + D++ +++F D+DK+GFI +E L K S A L+
Sbjct: 34 VGLSSKTPDQI-KKVFGILDQDKSGFIEEEE----------LQLFLKNFSSSARV-LTSA 81
Query: 147 EVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
E + D D +G I +EF
Sbjct: 82 ----------------ETKAFLAAGDTDGDGKIGVEEF 103
Score = 32.6 bits (75), Expect = 0.043
Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 132 FKEIDSDADKQLSREEVS--------EYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHD 182
+I S D + + + ++++ +++++F D+DK+GFI +
Sbjct: 3 ITDILSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEE 62
Query: 183 E 183
E
Sbjct: 63 E 63
Score = 31.5 bits (72), Expect = 0.12
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 305 VKHMLEEHDKLVEEIFQHEDKDKNGFISHDE 335
V + D++ +++F D+DK+GFI +E
Sbjct: 34 VGLSSKTPDQI-KKVFGILDQDKSGFIEEEE 63
Score = 30.3 bits (69), Expect = 0.27
Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 12/69 (17%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
VF +D D + EE+ Q+ S A + + D D
Sbjct: 47 VFGILDQDKSGFIEEEEL------QLFLKNFSSSARVLT------SAETKAFLAAGDTDG 94
Query: 328 NGFISHDEF 336
+G I +EF
Sbjct: 95 DGKIGVEEF 103
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A
{Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A
Length = 147
Score = 40.9 bits (97), Expect = 1e-04
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 11/102 (10%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQL 143
EE +E F DKD +G IS E P E+ ++ EID D + +
Sbjct: 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEV--ADLMNEIDVDGNHAI 64
Query: 144 SREEVSEYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
E + +Q+ + E+ E F+ DK+ +G IS E
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAEL 106
Score = 30.9 bits (71), Expect = 0.29
Identities = 31/141 (21%), Positives = 50/141 (35%), Gaps = 23/141 (16%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F D D +S E++ ++ + SE +V ++ E D D N
Sbjct: 17 FALFDKDNSGSISASELATVMR--SLGLSPSE--AEVADLMNEIDV-----------DGN 61
Query: 111 GFISHDEF-------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE 163
I EF E L FK D + D +S E+ L +E
Sbjct: 62 HAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 121
Query: 164 VEEIFQHEDKDKNGFISHDEF 184
V+E+ + D +G I+ +F
Sbjct: 122 VDEMLREVS-DGSGEINIKQF 141
Score = 27.0 bits (61), Expect = 5.3
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 306 KHMLEEHDKLVEEI---FQHEDKDKNGFISHDEF 336
+ + + +E+ F+ DK+ +G IS E
Sbjct: 75 RQLKCNDSE--QELLEAFKVFDKNGDGLISAAEL 106
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP:
a.39.1.4
Length = 109
Score = 39.9 bits (94), Expect = 1e-04
Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 34/128 (26%)
Query: 61 QLSREEVSEYLKKQMVAAEGS----EGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHD 116
L+ +V+ LK A S V + D + ++ F D+DK+GFI D
Sbjct: 6 ILADADVAAALKA--CEAADSFNYKAFFAKVGLTAKSADDI-KKAFFVIDQDKSGFIEED 62
Query: 117 EFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKN 176
E L + + A L+ E + + D D +
Sbjct: 63 E----------LKLFLQVFSAGARA-LTDA----------------ETKAFLKAGDSDGD 95
Query: 177 GFISHDEF 184
G I DE+
Sbjct: 96 GAIGVDEW 103
Score = 31.5 bits (72), Expect = 0.12
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 279 QLSREEVSEYLKKQMVAAEGS----EGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHD 334
L+ +V+ LK A S V + D + ++ F D+DK+GFI D
Sbjct: 6 ILADADVAAALKA--CEAADSFNYKAFFAKVGLTAKSADDI-KKAFFVIDQDKSGFIEED 62
Query: 335 E 335
E
Sbjct: 63 E 63
Score = 28.8 bits (65), Expect = 0.98
Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 12/69 (17%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
F ID D + +E+ +L+ A D + + D D
Sbjct: 47 AFFVIDQDKSGFIEEDELKLFLQVFSAGAR------------ALTDAETKAFLKAGDSDG 94
Query: 328 NGFISHDEF 336
+G I DE+
Sbjct: 95 DGAIGVDEW 103
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 40.6 bits (96), Expect = 1e-04
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 15/106 (14%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQL 143
E + + E F+ DKDK+G+I+ + P EL + ++I+ + +
Sbjct: 7 PEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMEL--IELSQQINMNLGGHV 64
Query: 144 SREEVSEYLKKQMVA--AEGSEVEEI---FQHEDKDKNGFISHDEF 184
++ E + +++A A+ V+E+ F+ D + +G IS E
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 110
Score = 39.4 bits (93), Expect = 4e-04
Identities = 30/151 (19%), Positives = 63/151 (41%), Gaps = 35/151 (23%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F+E D D D ++ ++ ++ + +E ++ + ++ + +
Sbjct: 16 AFREFDKDKDGYINCRDLGNCMR--TMGYMPTE--MELIELSQQINM-----------NL 60
Query: 110 NGFISHDEFS---GPKHDELG--------LPNVFKEIDSDADKQLSREEVSEYLKKQMVA 158
G + D+F GPK L + F+E D++ D ++S E L++ M A
Sbjct: 61 GGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSE----LREAMRA 116
Query: 159 AEG-----SEVEEIFQHEDKDKNGFISHDEF 184
G ++EEI + D + +G + +EF
Sbjct: 117 LLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 147
Score = 27.9 bits (63), Expect = 2.9
Identities = 10/67 (14%), Positives = 28/67 (41%), Gaps = 10/67 (14%)
Query: 270 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 329
++I+ + + ++ E + +++A E + + + + F+ D + +G
Sbjct: 54 QQINMNLGGHVDFDDFVELMGPKLLA-------ETADMIGVKE---LRDAFREFDTNGDG 103
Query: 330 FISHDEF 336
IS E
Sbjct: 104 EISTSEL 110
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 41.3 bits (97), Expect = 1e-04
Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 27/149 (18%)
Query: 38 LLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKL 97
+ ++ + + D +++ L + +D K + +
Sbjct: 54 IGALAVNPLGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRR 113
Query: 98 VE--EIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQ 155
+ FQ D D++G IS E + V + + Q++ E++
Sbjct: 114 NKLHYAFQLYDLDRDGKISRHE----------MLQVLRLM---VGVQVTEEQLEN----- 155
Query: 156 MVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ Q D+D +G +S EF
Sbjct: 156 -------IADRTVQEADEDGDGAVSFVEF 177
Score = 40.9 bits (96), Expect = 2e-04
Identities = 18/134 (13%), Positives = 46/134 (34%), Gaps = 32/134 (23%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F+ +D + LSR ++ + + + L + I + D +
Sbjct: 35 FRALDRNKKGYLSRMDLQQIGALAV-------------------NPLGDRIIESFFPDGS 75
Query: 111 GFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQH 170
+ F + + F+ ++ + + ++ ++ +++ FQ
Sbjct: 76 QRVDFPGF-------VRVLAHFRPVEDEDTETQDPKKPEPLNSRR------NKLHYAFQL 122
Query: 171 EDKDKNGFISHDEF 184
D D++G IS E
Sbjct: 123 YDLDRDGKISRHEM 136
Score = 34.7 bits (80), Expect = 0.024
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F+ D D D ++SR E+ Q++ + E+ + + + Q D+D +
Sbjct: 120 FQLYDLDRDGKISRHEM-----LQVLRLMVGVQVTE-----EQLENIADRTVQEADEDGD 169
Query: 329 GFISHDEF 336
G +S EF
Sbjct: 170 GAVSFVEF 177
Score = 34.3 bits (79), Expect = 0.031
Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 2/83 (2%)
Query: 256 LLSIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKL 315
+ ++ + + D +++ L + +D K + +
Sbjct: 54 IGALAVNPLGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRR 113
Query: 316 VE--EIFQHEDKDKNGFISHDEF 336
+ FQ D D++G IS E
Sbjct: 114 NKLHYAFQLYDLDRDGKISRHEM 136
Score = 27.0 bits (60), Expect = 8.4
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 19/68 (27%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F+ +D + LSR ++ + + + L + I + D +
Sbjct: 35 FRALDRNKKGYLSRMDLQQIGALAV-------------------NPLGDRIIESFFPDGS 75
Query: 329 GFISHDEF 336
+ F
Sbjct: 76 QRVDFPGF 83
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 40.3 bits (95), Expect = 2e-04
Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 100 EIFQHEDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
+IF DK G I+ D P + + + + L+ ++++
Sbjct: 8 DIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLV-QDIINADSSLRDASSLTLDQITGL 66
Query: 152 LKKQMVAAEGS------EVEEIFQHEDKDKNGFISHDEF 184
++ + + + + FQ DK+ G +S +
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDL 105
Score = 36.8 bits (86), Expect = 0.003
Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 39/133 (29%)
Query: 52 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 111
+ L+ ++++ ++ D + D + FQ DK+ G
Sbjct: 48 ADSSLRDASSLTLDQITGLIEVNE-------KELDATTKAKTED--FVKAFQVFDKESTG 98
Query: 112 FISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHE 171
+S + L + + E++++ +EV+E+ +
Sbjct: 99 KVSVGD----------LRYMLTGLG---------EKLTD-----------AEVDELLKGV 128
Query: 172 DKDKNGFISHDEF 184
+ D NG I + +F
Sbjct: 129 EVDSNGEIDYKKF 141
Score = 29.5 bits (67), Expect = 0.77
Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 9/67 (13%)
Query: 270 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 329
+ L+ ++++ ++ D + D + FQ DK+ G
Sbjct: 48 ADSSLRDASSLTLDQITGLIEVNE-------KELDATTKAKTED--FVKAFQVFDKESTG 98
Query: 330 FISHDEF 336
+S +
Sbjct: 99 KVSVGDL 105
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 40.6 bits (96), Expect = 2e-04
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 15/119 (12%)
Query: 78 AEGSEGAEDVKHML-EEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGL 128
A ++ + + L EE + F D D G IS E P +EL
Sbjct: 1 ASMTDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEEL-- 58
Query: 129 PNVFKEIDSDADKQLSREE----VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
+ +E+D D + EE + +K+ E+ F+ DK+ +GFI +E
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEE 117
Score = 38.7 bits (91), Expect = 6e-04
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 25/145 (17%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F D+D +S +E+ ++ M+ ++ E++ ++EE D+ D
Sbjct: 25 AFDMFDADGGGDISTKELGTVMR--MLGQNPTK--EELDAIIEEVDE-----------DG 69
Query: 110 NGFISHDEF----------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAA 159
+G I +EF E L N F+ D +AD + EE+ E L+
Sbjct: 70 SGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHV 129
Query: 160 EGSEVEEIFQHEDKDKNGFISHDEF 184
++E++ + DK+ +G I DEF
Sbjct: 130 TEEDIEDLMKDSDKNNDGRIDFDEF 154
Score = 27.9 bits (63), Expect = 3.2
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 11/66 (16%)
Query: 270 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 329
+E+D D + EE + +QM + E++ F+ DK+ +G
Sbjct: 63 EEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELA-----------NCFRIFDKNADG 111
Query: 330 FISHDE 335
FI +E
Sbjct: 112 FIDIEE 117
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 40.1 bits (95), Expect = 2e-04
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQL 143
EE + + E F D D G I E PK +E+ + EID + ++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEI--KKMISEIDKEGTGKM 59
Query: 144 SREEVSEYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
+ + + ++M + E+ + F+ D D+ G IS
Sbjct: 60 NFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNL 101
Score = 37.1 bits (87), Expect = 0.002
Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 22/142 (15%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F D+D + +E+ ++ + E + E++K M+ E DK +
Sbjct: 11 AFDLFDADGTGTIDVKELKVAMR--ALGFEPKK--EEIKKMISEIDK-----------EG 55
Query: 110 NGFISHDEFS---GPKHDELG----LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS 162
G ++ +F K E + FK D D ++S + + K+
Sbjct: 56 TGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 163 EVEEIFQHEDKDKNGFISHDEF 184
E++E+ D+D +G +S EF
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEF 137
Score = 26.7 bits (60), Expect = 7.7
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 306 KHMLEEHDKLVEEI---FQHEDKDKNGFISHDEF 336
+ M E+ K EEI F+ D D+ G IS
Sbjct: 70 QKMSEKDTK--EEILKAFKLFDDDETGKISFKNL 101
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 40.6 bits (96), Expect = 2e-04
Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 21/117 (17%)
Query: 81 SEGAEDVKHML-EEHDKLVEEIFQHEDKDKNGFISHDE---------FSGPKHDELGLPN 130
+EG+ +V M E + +E F D++ +G I D+ K++EL
Sbjct: 9 AEGSSNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEEL---- 64
Query: 131 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEI---FQHEDKDKNGFISHDEF 184
+ +A ++ +++ + I F+ D D G I
Sbjct: 65 --DAMIKEASGPINFTVFLTMFGEKL--KGADPEDVIMGAFKVLDPDGKGSIKKSFL 117
Score = 35.6 bits (83), Expect = 0.008
Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 7/93 (7%)
Query: 99 EEIFQHEDKDKNGFISHDEFS---GPKHDELG----LPNVFKEIDSDADKQLSREEVSEY 151
E K+ +G I+ F G K + FK +D D + + + E
Sbjct: 61 NEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEEL 120
Query: 152 LKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
L E++ ++ D G + +
Sbjct: 121 LTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNI 153
Score = 29.5 bits (67), Expect = 0.94
Identities = 11/126 (8%), Positives = 33/126 (26%), Gaps = 26/126 (20%)
Query: 40 SIGDQVTTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVE 99
++G + +A ++ +++ G++ + +
Sbjct: 53 AMGRLNVKNEELDAMIKEASGPINFTVFLTMFGEKLK---GADPEDVIM----------- 98
Query: 100 EIFQHEDKDKNGFISHDEFSGPKH--DELG-------LPNVFKEIDSDADKQLSREEVSE 150
F+ D D G I + G + N++ D + + +
Sbjct: 99 GAFKVLDPDGKGSIKKSFL---EELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICY 155
Query: 151 YLKKQM 156
+
Sbjct: 156 VITHGE 161
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 39.2 bits (92), Expect = 2e-04
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 27/96 (28%)
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEV 148
+ + V++IF+ D D++G++ DE L ++ SDA + L+ E
Sbjct: 34 GLSKMSASQVKDIFRFIDNDQSGYLDGDE----------LKYFLQKFQSDARE-LTESET 82
Query: 149 SEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K ++ A D D +G I DEF
Sbjct: 83 -----KSLMDA-----------ADNDGDGKIGADEF 102
Score = 31.1 bits (71), Expect = 0.13
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 307 HMLEEHDKLVEEIFQHEDKDKNGFISHDE 335
+ + V++IF+ D D++G++ DE
Sbjct: 34 GLSKMSASQVKDIFRFIDNDQSGYLDGDE 62
Score = 29.6 bits (67), Expect = 0.52
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+F+ ID+D L +E+ +L+K A + K +++ D D
Sbjct: 46 IFRFIDNDQSGYLDGDELKYFLQKFQSDAR-ELTESETKSLMDAA-----------DNDG 93
Query: 110 NGFISHDEF 118
+G I DEF
Sbjct: 94 DGKIGADEF 102
Score = 29.6 bits (67), Expect = 0.52
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+F+ ID+D L +E+ +L+K A +E K +++ D D
Sbjct: 46 IFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESE-TKSLMDAADN-----------DG 93
Query: 328 NGFISHDEF 336
+G I DEF
Sbjct: 94 DGKIGADEF 102
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A
1rk9_A 1g33_A
Length = 109
Score = 39.2 bits (92), Expect = 2e-04
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 32/126 (25%)
Query: 62 LSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEI---FQHEDKDKNGFISHDEF 118
LS E++ + + A S + M+ K +++ F DKDK+GFI DE
Sbjct: 6 LSAEDIKKAIGA--FTAADSFDHKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDE- 62
Query: 119 SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGF 178
L ++ K SDA ++S E + + DKD +G
Sbjct: 63 ---------LGSILKGFSSDA------RDLSA-----------KETKTLMAAGDKDGDGK 96
Query: 179 ISHDEF 184
I +EF
Sbjct: 97 IGVEEF 102
Score = 31.5 bits (72), Expect = 0.11
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 280 LSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEI---FQHEDKDKNGFISHDE 335
LS E++ + + A S + M+ K +++ F DKDK+GFI DE
Sbjct: 6 LSAEDIKKAIGA--FTAADSFDHKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDE 62
Score = 31.1 bits (71), Expect = 0.17
Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 12/69 (17%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
VF +D D + +E+ LK A A++ K ++ DKD
Sbjct: 46 VFHILDKDKSGFIEEDELGSILKGFSSDAR-DLSAKETKTLMAAG-----------DKDG 93
Query: 110 NGFISHDEF 118
+G I +EF
Sbjct: 94 DGKIGVEEF 102
Score = 31.1 bits (71), Expect = 0.17
Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 12/69 (17%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
VF +D D + +E+ LK A A++ K ++ DK D
Sbjct: 46 VFHILDKDKSGFIEEDELGSILKGFSSDAR-DLSAKETKTLMAAGDK-----------DG 93
Query: 328 NGFISHDEF 336
+G I +EF
Sbjct: 94 DGKIGVEEF 102
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D*
2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A
1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 40.2 bits (95), Expect = 2e-04
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDADKQL 143
EE +E F DKD +G I+ E P EL ++ E+D+D + +
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGNGTI 63
Query: 144 SREEVSEYLKKQMVAAEGSEVE--EIFQHEDKDKNGFISHDEF 184
E + ++M + SE E E F+ D+D NG IS E
Sbjct: 64 DFPEFLSLMARKM-KEQDSEEELIEAFKVFDRDGNGLISAAEL 105
Score = 35.9 bits (84), Expect = 0.006
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 98 VEEIFQHEDKDKNGFISHDEFS---GPKHDELG----LPNVFKEIDSDADKQLSREEVSE 150
++++ D D NG I EF K E L FK D D + +S E+
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH 107
Query: 151 YLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ EV+E+ + D D +G I+++EF
Sbjct: 108 VMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
Score = 26.7 bits (60), Expect = 6.7
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 306 KHMLEEHDKLVEEI---FQHEDKDKNGFISHDEF 336
+ M E+ + EE+ F+ D+D NG IS E
Sbjct: 74 RKMKEQDSE--EELIEAFKVFDRDGNGLISAAEL 105
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule 2,
metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B
2vtg_A
Length = 150
Score = 39.8 bits (93), Expect = 3e-04
Identities = 16/109 (14%), Positives = 31/109 (28%), Gaps = 11/109 (10%)
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADK 141
+ L E +E + D + G I G L + + E+
Sbjct: 42 EENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSD 101
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHD 190
+S + M+ + S V ++ + N P+ D
Sbjct: 102 TISYRDF-----VNMMLGKRSAVLKLVMMFEGKANESSPKPVGPPPERD 145
Score = 29.8 bits (67), Expect = 0.68
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDE 335
+ L E +E + D + G I
Sbjct: 42 EENLPEKLTAFKEKYMEFDLNNEGEIDLMS 71
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 142
Score = 39.8 bits (94), Expect = 3e-04
Identities = 15/102 (14%), Positives = 37/102 (36%), Gaps = 11/102 (10%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDADKQL 143
++ +E F+ D ++ GFI+ + + +F E D+ + ++
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFN--EMFNEADATGNGKI 59
Query: 144 SREEVSEYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
E + ++M + + F+ D + G+I
Sbjct: 60 QFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAAL 101
Score = 27.1 bits (61), Expect = 5.9
Identities = 5/34 (14%), Positives = 13/34 (38%), Gaps = 5/34 (14%)
Query: 306 KHMLEEHDKLVEEI---FQHEDKDKNGFISHDEF 336
+ M + + + + F+ D + G+I
Sbjct: 70 RRMKQTTSE--DILRQAFRTFDPEGTGYIPKAAL 101
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 38.7 bits (91), Expect = 3e-04
Identities = 22/97 (22%), Positives = 31/97 (31%), Gaps = 30/97 (30%)
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREE 147
+ V++ F D+DK+GFI DE L + A L+
Sbjct: 36 ASKSLDD---VKKAFYVIDQDKSGFIEEDE----------LKLFLQNFSPSARA-LTDA- 80
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
E + DKD +G I DEF
Sbjct: 81 ---------------ETKAFLADGDKDGDGMIGVDEF 102
Score = 29.8 bits (68), Expect = 0.43
Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 12/69 (17%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
F ID D + +E+ ++ S A + D + DKD
Sbjct: 46 AFYVIDQDKSGFIEEDEL------KLFLQNFSPSARAL------TDAETKAFLADGDKDG 93
Query: 328 NGFISHDEF 336
+G I DEF
Sbjct: 94 DGMIGVDEF 102
Score = 29.8 bits (68), Expect = 0.45
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDE 335
+ V++ F D+DK+GFI DE
Sbjct: 36 ASKSLDD---VKKAFYVIDQDKSGFIEEDE 62
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 39.4 bits (93), Expect = 3e-04
Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 15/94 (15%)
Query: 100 EIFQHEDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
E F D++++GFI ++ P + L + + S+A ++
Sbjct: 11 EAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYL------EGMMSEAPGPINFTMFLTM 64
Query: 152 LKKQMVAAE-GSEVEEIFQHEDKDKNGFISHDEF 184
+++ + + F D++ +GFI D
Sbjct: 65 FGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHL 98
Score = 32.8 bits (76), Expect = 0.051
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Query: 99 EEIFQHEDKDKNGFISHDEFS---GPKHDELG----LPNVFKEIDSDADKQLSREEVSEY 151
+E + + G I+ F G K + + N F D +A + + + E
Sbjct: 42 DEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLREL 101
Query: 152 LKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
L EV+E+++ DK G ++ EF
Sbjct: 102 LTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEF 134
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4
PDB: 2pas_A 3pat_A
Length = 110
Score = 38.7 bits (91), Expect = 3e-04
Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 29/97 (29%)
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREE 147
+ +D V+++F+ D D +GFI +E L V K +D L+
Sbjct: 36 LKAMSAND--VKKVFKAIDADASGFIEEEE----------LKFVLKSFAADGRD-LTDA- 81
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
E + + DKD +G I DEF
Sbjct: 82 ---------------ETKAFLKAADKDGDGKIGIDEF 103
Score = 29.5 bits (67), Expect = 0.61
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
VFK ID+DA + EE+ + V + D+ D + + DKD
Sbjct: 47 VFKAIDADASGFIEEEEL------KFVLKSFAADGRDL------TDAETKAFLKAADKDG 94
Query: 328 NGFISHDEF 336
+G I DEF
Sbjct: 95 DGKIGIDEF 103
Score = 29.1 bits (66), Expect = 0.83
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 306 KHMLEEHDKLVEEIFQHEDKDKNGFISHDE 335
+ +D V+++F+ D D +GFI +E
Sbjct: 36 LKAMSAND--VKKVFKAIDADASGFIEEEE 63
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 41.1 bits (97), Expect = 3e-04
Identities = 13/103 (12%), Positives = 32/103 (31%), Gaps = 15/103 (14%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAA--EGSEGAE---------DVKHMLEEHDKLVE 99
E S+ D + + + A EG + ++ H +
Sbjct: 327 LIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTI-L 385
Query: 100 EIFQHEDKDKNGFISHDEFSGPKH-DELGLPNVFKEIDSDADK 141
H D++ I++ + ++ D G+P + ++
Sbjct: 386 NPHIHLMGDESACIAYIRIT--QYLDAGGIPRTAQSEETRVWH 426
Score = 35.7 bits (83), Expect = 0.019
Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 12/78 (15%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAA--EGSEGAE---------DVKHMLEEHDKLVE 317
E S+ D + + + A EG + ++ H +
Sbjct: 327 LIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTI-L 385
Query: 318 EIFQHEDKDKNGFISHDE 335
H D++ I++
Sbjct: 386 NPHIHLMGDESACIAYIR 403
Score = 35.4 bits (82), Expect = 0.023
Identities = 14/97 (14%), Positives = 32/97 (32%), Gaps = 5/97 (5%)
Query: 88 KHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREE 147
++ ++++ Q + NG D S K + G+ E + + L
Sbjct: 311 RNFSVRKQEIIKVTEQLIEAISNG----DFESYTKMCDPGMTAFEPEALGNLVEGLDFHR 366
Query: 148 -VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
E L + + + H D++ I++
Sbjct: 367 FYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIR 403
Score = 33.4 bits (77), Expect = 0.11
Identities = 12/132 (9%), Positives = 32/132 (24%), Gaps = 12/132 (9%)
Query: 60 KQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF- 118
+ S + + + K + D + + D + + + F
Sbjct: 311 RNFSVRK--QEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFY 368
Query: 119 ------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHED 172
K + N + D ++ +++YL +
Sbjct: 369 FENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAG---GIPRTAQSEETRVW 425
Query: 173 KDKNGFISHDEF 184
++G F
Sbjct: 426 HRRDGKWQIVHF 437
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding,
ME binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 39.9 bits (94), Expect = 3e-04
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQL 143
EE + + E F D D +G I E PK +E+ + EID D +
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEI--KKMISEIDKDGSGTI 81
Query: 144 SREEVSEYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
EE + +M + E+ + F+ D D +G I+ +
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDL 123
Score = 36.8 bits (86), Expect = 0.003
Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 22/142 (15%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F D+D + +E+ ++ + E + E++K M+ E DK D
Sbjct: 33 AFDLFDTDGSGTIDAKELKVAMR--ALGFEPKK--EEIKKMISEIDK-----------DG 77
Query: 110 NGFISHDEF-------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS 162
+G I +EF G + + F+ D D ++ +++ K+
Sbjct: 78 SGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEE 137
Query: 163 EVEEIFQHEDKDKNGFISHDEF 184
E++E+ D++ + I DEF
Sbjct: 138 ELQEMIAEADRNDDNEIDEDEF 159
Score = 27.5 bits (62), Expect = 4.0
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 306 KHMLEEHDKLVEEI---FQHEDKDKNGFISHDEF 336
M E + EEI F+ D D +G I+ +
Sbjct: 92 AKMGERDSR--EEILKAFRLFDDDNSGTITIKDL 123
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 38.1 bits (89), Expect = 4e-04
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 130 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+F + D D D +S EV E K + + + I+ D G +S D+F
Sbjct: 14 EIFLKTDKDMDGFVSGLEVREIFLKTGLPST--LLAHIWSLCDTKDCGKLSKDQF 66
Score = 34.7 bits (80), Expect = 0.007
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 99 EEIFQHEDKDKNGFISHDEFSGPKHDELGLPN-----VFKEIDSDADKQLSREE 147
+EIF DKD +GF+S E + GLP+ ++ D+ +LS+++
Sbjct: 13 DEIFLKTDKDMDGFVSGLEVR-EIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQ 65
Score = 32.4 bits (74), Expect = 0.047
Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 17/71 (23%)
Query: 48 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 107
+F + D D D +S EV E K L+ I+ D
Sbjct: 13 DEIFLKTDKDMDGFVSGLEVREIFLK-----------------TGLPSTLLAHIWSLCDT 55
Query: 108 DKNGFISHDEF 118
G +S D+F
Sbjct: 56 KDCGKLSKDQF 66
Score = 32.4 bits (74), Expect = 0.047
Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 17/71 (23%)
Query: 266 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 325
+F + D D D +S EV E K L+ I+ D
Sbjct: 13 DEIFLKTDKDMDGFVSGLEVREIFLK-----------------TGLPSTLLAHIWSLCDT 55
Query: 326 DKNGFISHDEF 336
G +S D+F
Sbjct: 56 KDCGKLSKDQF 66
Score = 28.1 bits (63), Expect = 1.2
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 13/41 (31%)
Query: 143 LSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
+S E ++Y +EIF DKD +GF+S E
Sbjct: 4 VSPAEKAKY-------------DEIFLKTDKDMDGFVSGLE 31
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 39.5 bits (93), Expect = 4e-04
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 12/120 (10%)
Query: 75 MVAAEGSEGAEDVKHML-EEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDE 125
M S + + L EE + + E F D + +GF+ + E E
Sbjct: 1 MSKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60
Query: 126 LGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
+ ++ E DS+ + ++ + ++++ + E++ FQ D D G IS
Sbjct: 61 IL--DLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNL 118
Score = 38.3 bits (90), Expect = 0.001
Identities = 23/142 (16%), Positives = 52/142 (36%), Gaps = 22/142 (15%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F D + D L E+ +K + E + ++ +++E+D +
Sbjct: 28 AFSLFDMNNDGFLDYHELKVAMK--ALGFELPK--REILDLIDEYDS-----------EG 72
Query: 110 NGFISHDEF-------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGS 162
+ +D+F + + F+ D D ++S + + K+
Sbjct: 73 RHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDE 132
Query: 163 EVEEIFQHEDKDKNGFISHDEF 184
E+ + + D D +G I+ +EF
Sbjct: 133 ELRAMIEEFDLDGDGEINENEF 154
Score = 26.4 bits (59), Expect = 9.8
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 5/34 (14%)
Query: 306 KHMLEEHDKLVEEI---FQHEDKDKNGFISHDEF 336
+ +L+ +EI FQ D D G IS
Sbjct: 87 EKILKRDPL--DEIKRAFQLFDDDHTGKISIKNL 118
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1;
phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 41.0 bits (95), Expect = 4e-04
Identities = 9/56 (16%), Positives = 28/56 (50%)
Query: 130 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
+ ++ D + D +++ +E+ ++LK+ + + +IF+ D + + +E
Sbjct: 15 SCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIE 70
Score = 36.8 bits (84), Expect = 0.010
Identities = 26/174 (14%), Positives = 64/174 (36%), Gaps = 39/174 (22%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 108
+ ++ D + D +++ +E+ ++LK+ + + D +IF+ D
Sbjct: 15 SCLRKADKNKDNKMNFKELKDFLKELNIQVD---------------DGYARKIFRECDHS 59
Query: 109 KNGFISHDEFSG----PKHDELGLPNVFKEIDSDADKQLSREEVSEYLK---KQMVAAEG 161
+ + +E + F+E + + + LS E + +L+ ++ A
Sbjct: 60 QTDSLEDEEIETFYKMLTQRAE-IDRAFEEA-AGSAETLSVERLVTFLQHQQREEEAGPA 117
Query: 162 SEVEEIFQHEDKD---KNGFISHDEFS-----------GPKHDELH-DRDQPFT 200
+ I ++E + ++ D F H ++ D DQP +
Sbjct: 118 LALSLIERYEPSETAKAQRQMTKDGFLMYLLSADGNAFSLAHRRVYQDMDQPLS 171
Score = 32.6 bits (73), Expect = 0.22
Identities = 10/71 (14%), Positives = 29/71 (40%), Gaps = 15/71 (21%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKD 326
+ ++ D + D +++ +E+ ++LK+ + + D +IF+ D
Sbjct: 15 SCLRKADKNKDNKMNFKELKDFLKELNIQVD---------------DGYARKIFRECDHS 59
Query: 327 KNGFISHDEFS 337
+ + +E
Sbjct: 60 QTDSLEDEEIE 70
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 39.2 bits (91), Expect = 4e-04
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHM-LEEHDKLVEEIFQHEDKDK 109
FK D D + L E L + EG+E M +E +++ + + +DK+
Sbjct: 74 FKMHDYDGNNLLDGLE----LSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNN 129
Query: 110 NGFISHDEF 118
+G+I + EF
Sbjct: 130 DGYIDYAEF 138
Score = 39.2 bits (91), Expect = 4e-04
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHM-LEEHDKLVEEIFQHEDKDK 327
FK D D + L E L + EG+E M +E +++ + + +DK+
Sbjct: 74 FKMHDYDGNNLLDGLE----LSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNN 129
Query: 328 NGFISHDEF 336
+G+I + EF
Sbjct: 130 DGYIDYAEF 138
Score = 38.8 bits (90), Expect = 6e-04
Identities = 19/106 (17%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 85 EDVKHMLEEHD------KLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSD 138
E ++ ++ + + +L F+ D D N + E + +V KE S+
Sbjct: 51 EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLEL------STAITHVHKEEGSE 104
Query: 139 ADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+S +E+ ++ + + +DK+ +G+I + EF
Sbjct: 105 QAPLMSEDELIN------------IIDGVLRDDDKNNDGYIDYAEF 138
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z
1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z
3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z
2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Length = 156
Score = 39.4 bits (93), Expect = 4e-04
Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 13/90 (14%)
Query: 105 EDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQM 156
++G + + P+++++ +K L EE + M
Sbjct: 20 FWDGRDGAVDAFKLGDVCRCLGINPRNEDV---FAVGGTHKMGEKSLPFEEFLPAYEGLM 76
Query: 157 VAAEGSEVE--EIFQHEDKDKNGFISHDEF 184
+G+ + E F+ D++ GFIS E
Sbjct: 77 DCEQGTFADYMEAFKTFDREGQGFISGAEL 106
Score = 34.1 bits (79), Expect = 0.023
Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 45/134 (33%)
Query: 53 EIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGF 112
+K L EE + M +G+ D E F+ D++ GF
Sbjct: 54 GTHKMGEKSLPFEEFLPAYEGLMDCEQGTF--ADYM-----------EAFKTFDREGQGF 100
Query: 113 ISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHED 172
IS E +H V + E +S+ +V+EI + D
Sbjct: 101 ISGAEL---RH-------VLTALG---------ERLSD-----------EDVDEIIKLTD 130
Query: 173 --KDKNGFISHDEF 184
+D G + +++F
Sbjct: 131 LQEDLEGNVKYEDF 144
Score = 31.0 bits (71), Expect = 0.33
Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 13/66 (19%)
Query: 271 EIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGF 330
+K L EE + M +G+ D E F+ D++ GF
Sbjct: 54 GTHKMGEKSLPFEEFLPAYEGLMDCEQGTF--ADYM-----------EAFKTFDREGQGF 100
Query: 331 ISHDEF 336
IS E
Sbjct: 101 ISGAEL 106
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 37.5 bits (88), Expect = 6e-04
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 108 DKNGFISHDEFSGPKH---DEL-GLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE 163
+G I D+ + +E+ GL +FK ID+D ++ +E+ + LK+ SE
Sbjct: 1 HSSGHIDDDDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESE 60
Query: 164 VEEIFQHEDKDKNGFISHDEF 184
++++ D DK+G I + EF
Sbjct: 61 IKDLMDAADIDKSGTIDYGEF 81
Score = 27.9 bits (63), Expect = 1.4
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+FK ID+D ++ +E+ + LK+ GSE E E L++ D DK
Sbjct: 28 LFKMIDTDNSGTITFDELKDGLKRV-----GSELME------SEIKDLMDAA----DIDK 72
Query: 110 NGFISHDEF 118
+G I + EF
Sbjct: 73 SGTIDYGEF 81
Score = 27.9 bits (63), Expect = 1.4
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 15/69 (21%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+FK ID+D ++ +E+ + LK+ GSE E E L++ D DK
Sbjct: 28 LFKMIDTDNSGTITFDELKDGLKRV-----GSELME------SEIKDLMDAA----DIDK 72
Query: 328 NGFISHDEF 336
+G I + EF
Sbjct: 73 SGTIDYGEF 81
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 38.7 bits (91), Expect = 6e-04
Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 15/98 (15%)
Query: 100 EIFQHEDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDA--DKQLSREEVS 149
E F D+ + I+ + P + E+ + + ++ EE
Sbjct: 12 EAFLLFDRTGDAKITASQVGDIARALGQNPTNAEIN--KILGNPSKEEMNAAAITFEEFL 69
Query: 150 EYLKKQMVAAEGSEVEEI---FQHEDKDKNGFISHDEF 184
L+ + E+ + DK+ NG + E
Sbjct: 70 PMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAEL 107
Score = 32.1 bits (74), Expect = 0.12
Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 34/100 (34%)
Query: 88 KHMLEEHDKLVEEI---FQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLS 144
+ E+ + DK+ NG + E +H V +
Sbjct: 74 AAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAEL---RH-------VLATLG-------- 115
Query: 145 REEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
E+++E EVEE+ + +D NG I+++ F
Sbjct: 116 -EKMTE-----------EEVEELMK-GQEDSNGCINYEAF 142
Score = 26.3 bits (59), Expect = 9.3
Identities = 6/34 (17%), Positives = 11/34 (32%), Gaps = 3/34 (8%)
Query: 306 KHMLEEHDKLVEEI---FQHEDKDKNGFISHDEF 336
+ E+ + DK+ NG + E
Sbjct: 74 AAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAEL 107
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal
binding Pro; NMR {Glycine max}
Length = 92
Score = 37.2 bits (87), Expect = 8e-04
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 89 HMLEEHDKLVEEIFQHEDKDKNGFISHDEFS------GPKHDELGLPNVFKEIDSDADKQ 142
HM + ++ ++E F+ DKD+NG+IS E G K + + + KE D D D Q
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 143 LSREEVSEYLKKQMVAAEGSEVEEI 167
++ EE + + G+ +
Sbjct: 62 VNYEEFVKMMMTVRGGGGGNGWSRL 86
Score = 27.6 bits (62), Expect = 1.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 163 EVEEIFQHEDKDKNGFISHDE 183
E++E F+ DKD+NG+IS E
Sbjct: 10 ELKEAFKVFDKDQNGYISASE 30
Score = 27.6 bits (62), Expect = 2.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 307 HMLEEHDKLVEEIFQHEDKDKNGFISHDE 335
HM + ++ ++E F+ DKD+NG+IS E
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASE 30
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 38.4 bits (89), Expect = 8e-04
Identities = 15/116 (12%), Positives = 42/116 (36%), Gaps = 12/116 (10%)
Query: 72 KKQMVAAEGSEGAEDVKHM----LEEHDKLVEEIFQHEDKDKNGFISHDEFS------GP 121
+++ + + +D K+ L + + + D + NG I G
Sbjct: 20 QEERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGV 79
Query: 122 KHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNG 177
L L + +E+ S +++ S + + + A + +++ ++K+
Sbjct: 80 PKTHLELKRLIREVSSGSEETFSYSDFLRMMLGKRSAIL--RMILMYEEKNKEHKR 133
Score = 36.8 bits (85), Expect = 0.002
Identities = 11/92 (11%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Query: 97 LVEEIFQHEDKDKNGFISHDEFSGPKHDE---LGLPNVFKEIDSDADKQLSREEVSEYLK 153
L + + + F+ ++S + + E D + + + + L+
Sbjct: 16 LKAQQEERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLE 75
Query: 154 KQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
K V E++ + + S+ +F
Sbjct: 76 KLGVPKTHLELKRLIREVSSGSEETFSYSDFL 107
Score = 31.4 bits (71), Expect = 0.21
Identities = 9/70 (12%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 114 SHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDK 173
+ G K L + ++ + L + Y + + ++ + + D
Sbjct: 3 QSRDLQGGKAFGLLKAQQEERLEGINKQFLDDPK---YSNDEDLPSKLEAFKVKYMEFDL 59
Query: 174 DKNGFISHDE 183
+ NG I
Sbjct: 60 NGNGDIDIMS 69
Score = 28.7 bits (64), Expect = 1.4
Identities = 7/50 (14%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Query: 290 KKQMVAAEGSEGAEDVKHM----LEEHDKLVEEIFQHEDKDKNGFISHDE 335
+++ + + +D K+ L + + + D + NG I
Sbjct: 20 QEERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMS 69
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 37.4 bits (87), Expect = 0.001
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 99 EEIFQHEDKDKNGFISHDE----FSGPKHDELGLPNVFKEIDSDADKQLSREE 147
++F DK +G ++ + + L +++ D D D +L+ EE
Sbjct: 17 RQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEE 69
Score = 36.7 bits (85), Expect = 0.002
Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 116 DEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDK 175
E++ P+ L +F D L+ + L + + ++ I+ D D+
Sbjct: 4 AEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQA--QLASIWNLSDIDQ 61
Query: 176 NGFISHDEF 184
+G ++ +EF
Sbjct: 62 DGKLTAEEF 70
Score = 30.9 bits (70), Expect = 0.21
Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 17/71 (23%)
Query: 48 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 107
+F D L+ + L + S + + I+ D
Sbjct: 17 RQLFNSHDKTMSGHLTGPQARTILMQ-------SSLPQAQ----------LASIWNLSDI 59
Query: 108 DKNGFISHDEF 118
D++G ++ +EF
Sbjct: 60 DQDGKLTAEEF 70
Score = 30.9 bits (70), Expect = 0.21
Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 17/71 (23%)
Query: 266 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 325
+F D L+ + L + S + + I+ D
Sbjct: 17 RQLFNSHDKTMSGHLTGPQARTILMQ-------SSLPQAQ----------LASIWNLSDI 59
Query: 326 DKNGFISHDEF 336
D++G ++ +EF
Sbjct: 60 DQDGKLTAEEF 70
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 39.8 bits (92), Expect = 0.001
Identities = 50/370 (13%), Positives = 110/370 (29%), Gaps = 115/370 (31%)
Query: 17 YGDRGAG-NVIPGGATLTFEVEL--------LSIGDQVTTTNVFKEIDSDADKQLSREEV 67
G G+G + L+++V+ L++ + + V + + ++L +
Sbjct: 156 DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML-----QKLLYQID 210
Query: 68 SEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKH-DEL 126
+ S+ + ++K + + + + + +N + K +
Sbjct: 211 PNW-------TSRSDHSSNIKLRIHSIQAELRRLLKSKPY-ENCLLVLLNVQNAKAWNAF 262
Query: 127 GL----------PNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKN 176
L V + + +S + S L EV+ +
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP-------DEVKSLLLK------ 309
Query: 177 GFISHDEFSGPKHDELHDRDQPFTFTLGVGQVIKG----WDQ----------GLTEMCV- 221
++ P+ E+ + P ++ + + I+ WD + E +
Sbjct: 310 -YLDCRPQDLPR--EVLTTN-PRRLSI-IAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 222 ----GEKRK----LTIPPALAYGDRGAGNV-IPGGATLTFEVELLSIGDQVTTTNVFKEI 272
E RK L++ P + IP LLS+ I
Sbjct: 365 VLEPAEYRKMFDRLSVFPP---------SAHIP--------TILLSL------------I 395
Query: 273 DSDADKQLSREEVSEYLKKQMVAAEGSEGA-------EDVKHMLEE----HDKLVEEIFQ 321
D K V++ K +V + E ++K LE H +V+
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNI 455
Query: 322 HEDKDKNGFI 331
+ D + I
Sbjct: 456 PKTFDSDDLI 465
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding
protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 36.4 bits (85), Expect = 0.001
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 24/95 (25%)
Query: 90 MLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVS 149
M + +E F+ D + +G+++ E L +D + + +S
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALE----------LQTFMVTLD-------AYKALS 43
Query: 150 EYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ K+ ++ + DK+ +G IS +EF
Sbjct: 44 KDKVKE-------ASAKLIKMADKNSDGKISKEEF 71
Score = 32.6 bits (75), Expect = 0.027
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
FK++D++ D ++ E+ ++ S+ E KL++ DK+
Sbjct: 12 AFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVK-----EASAKLIKMA----DKNS 62
Query: 328 NGFISHDEF 336
+G IS +EF
Sbjct: 63 DGKISKEEF 71
Score = 27.6 bits (62), Expect = 1.5
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 308 MLEEHDKLVEEIFQHEDKDKNGFISHDE 335
M + +E F+ D + +G+++ E
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALE 28
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis complex;
NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 36.6 bits (85), Expect = 0.001
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 130 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
N FK I D + + E+ K + E+ I++ D DK+G ++ DEF
Sbjct: 13 NQFKTIQPDLNGFIPGSAAKEFFTKSKLPIL--ELSHIWELSDFDKDGALTLDEF 65
Score = 34.3 bits (79), Expect = 0.008
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 99 EEIFQHEDKDKNGFISHDE----FSGPKHDELGLPNVFKEIDSDADKQLSREE 147
F+ D NGFI F+ K L L ++++ D D D L+ +E
Sbjct: 12 VNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDE 64
Score = 30.8 bits (70), Expect = 0.12
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 17/71 (23%)
Query: 48 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 107
N FK I D + + E+ K S+ + I++ D
Sbjct: 12 VNQFKTIQPDLNGFIPGSAAKEFFTK-------SKLPILE----------LSHIWELSDF 54
Query: 108 DKNGFISHDEF 118
DK+G ++ DEF
Sbjct: 55 DKDGALTLDEF 65
Score = 30.8 bits (70), Expect = 0.12
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 17/71 (23%)
Query: 266 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 325
N FK I D + + E+ K S+ + I++ D
Sbjct: 12 VNQFKTIQPDLNGFIPGSAAKEFFTK-------SKLPILE----------LSHIWELSDF 54
Query: 326 DKNGFISHDEF 336
DK+G ++ DEF
Sbjct: 55 DKDGALTLDEF 65
Score = 27.8 bits (62), Expect = 1.8
Identities = 6/28 (21%), Positives = 9/28 (32%)
Query: 156 MVAAEGSEVEEIFQHEDKDKNGFISHDE 183
+ + F+ D NGFI
Sbjct: 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSA 30
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin
V, chicken, molecular motor, ATPase, ELC, IQ motif,
muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens}
SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B*
1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Length = 151
Score = 37.6 bits (88), Expect = 0.002
Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 19/109 (17%)
Query: 85 EDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF-----SGPKHDELG----LPNVFKEI 135
+V +L D+ K+ + + F + K+ G F+
Sbjct: 46 AEVLKVLGNPKS---------DELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVF 96
Query: 136 DSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
D + + ++ E+ L EVE + +D NG I+++ F
Sbjct: 97 DKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINYEAF 144
Score = 37.2 bits (87), Expect = 0.002
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 15/106 (14%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDA--DK 141
++ + +E F+ D+ +G I + + P + E+ V SD +
Sbjct: 6 KDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVL--KVLGNPKSDELKSR 63
Query: 142 QLSREEVSEYLKKQMVAAEGSEVEEI---FQHEDKDKNGFISHDEF 184
++ E L+ E+ F+ DK+ NG + E
Sbjct: 64 RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAEL 109
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 37.4 bits (87), Expect = 0.002
Identities = 23/166 (13%), Positives = 47/166 (28%), Gaps = 41/166 (24%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE-GAEDVKHMLEEHD------------ 95
F + + D Q+ +E+ L + +A E + M+ D
Sbjct: 6 GYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEF 64
Query: 96 -------KLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEV 148
+ F D D++G + E L + + Q
Sbjct: 65 KELWAVLNGWRQHFISFDSDRSGTVDPQE----------LQKALTTMGFRLNPQTVNSIA 114
Query: 149 SEYLKKQMVAAEG--------SEVEEIFQHEDKDKNGFI--SHDEF 184
Y + + + + F+ D + G + S+D+F
Sbjct: 115 KRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDF 160
Score = 30.8 bits (70), Expect = 0.36
Identities = 15/100 (15%), Positives = 30/100 (30%), Gaps = 19/100 (19%)
Query: 98 VEEIFQ--HEDKDKNGFISHDE--------FSGPKHDELGLPNV---FKEIDSDADKQLS 144
++ ++ ++G I DE + L +D D +
Sbjct: 1 MDPLYGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMG 60
Query: 145 REEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
E E L + + + F D D++G + E
Sbjct: 61 FNEFKE-LWAVL-----NGWRQHFISFDSDRSGTVDPQEL 94
Score = 28.9 bits (65), Expect = 1.6
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 23/89 (25%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHD------------- 313
F DSD + +E L+K + + V + + +
Sbjct: 76 QHFISFDSDRSGTVDPQE----LQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIAC 131
Query: 314 ----KLVEEIFQHEDKDKNGFI--SHDEF 336
+ + + F+ D + G + S+D+F
Sbjct: 132 CVKLRALTDSFRRRDSAQQGMVNFSYDDF 160
Score = 27.7 bits (62), Expect = 4.1
Identities = 14/90 (15%), Positives = 27/90 (30%), Gaps = 21/90 (23%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE-GAEDVKHMLEEHD------------ 313
F + + D Q+ +E+ L + +A E + M+ D
Sbjct: 6 GYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEF 64
Query: 314 -------KLVEEIFQHEDKDKNGFISHDEF 336
+ F D D++G + E
Sbjct: 65 KELWAVLNGWRQHFISFDSDRSGTVDPQEL 94
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 37.2 bits (87), Expect = 0.003
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 98 VEEIFQHEDKDKNGFISHDEF----------SGPKHDELGLPNVFKEIDSDADKQLSREE 147
++E+ D+D +G + DEF E L ++F+ D +AD + EE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ L+ ++EE+ + DK+ +G I +DEF
Sbjct: 117 LKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 153
Score = 35.2 bits (82), Expect = 0.010
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 15/106 (14%)
Query: 92 EEHDKLVEEIFQHEDKD-KNGFISHDEF--------SGPKHDELGLPNVFKEIDSDADKQ 142
EE + F ++G IS E P +EL + E+D D
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGT 71
Query: 143 LSREEVSEYLKKQMVAAEGSEVEE----IFQHEDKDKNGFISHDEF 184
+ +E + + M + EE +F+ DK+ +G+I +E
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEEL 117
Score = 27.9 bits (63), Expect = 2.9
Identities = 12/67 (17%), Positives = 27/67 (40%), Gaps = 11/67 (16%)
Query: 270 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 329
E+D D + +E + + M + E++ ++F+ DK+ +G
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS-----------DLFRMFDKNADG 110
Query: 330 FISHDEF 336
+I +E
Sbjct: 111 YIDLEEL 117
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8
PDB: 1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 37.0 bits (86), Expect = 0.003
Identities = 25/160 (15%), Positives = 46/160 (28%), Gaps = 40/160 (25%)
Query: 55 DSDADKQLSREEVSEYLKKQMVAAEGSE-GAEDVKHMLEEHDK-------LVE------- 99
+ D ++ EE+ L + + S E + M+ D+
Sbjct: 9 VAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA 68
Query: 100 -----EIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKK 154
E F D+D +G + H E L + Q V Y K
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHE----------LRQAIGLMGYRLSPQTLTTIVKRYSKN 118
Query: 155 QMVAAEG--------SEVEEIFQHEDKDKNGFI--SHDEF 184
+ + + + F+ D + G +D+F
Sbjct: 119 GRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDF 158
Score = 28.1 bits (63), Expect = 2.8
Identities = 10/89 (11%), Positives = 28/89 (31%), Gaps = 23/89 (25%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHD------------- 313
F +D D + E L++ + + + +++ +
Sbjct: 74 ENFMTVDQDGSGTVEHHE----LRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVAC 129
Query: 314 ----KLVEEIFQHEDKDKNGFI--SHDEF 336
+ + + F+ D + G +D+F
Sbjct: 130 CVKLRALTDFFRKRDHLQQGSANFIYDDF 158
Score = 27.7 bits (62), Expect = 3.3
Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 20/84 (23%)
Query: 273 DSDADKQLSREEVSEYLKKQMVAAEGSE-GAEDVKHMLEEHDK-------LVE------- 317
+ D ++ EE+ L + + S E + M+ D+
Sbjct: 9 VAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA 68
Query: 318 -----EIFQHEDKDKNGFISHDEF 336
E F D+D +G + H E
Sbjct: 69 LNAWKENFMTVDQDGSGTVEHHEL 92
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Length = 153
Score = 36.7 bits (86), Expect = 0.003
Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 15/94 (15%)
Query: 100 EIFQHEDKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
E F D+D++GFI ++ P DEL + + QL+
Sbjct: 20 EAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDEL------NAMLKECPGQLNFTAFLTL 73
Query: 152 LKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
+++ + + F D+D GFI D
Sbjct: 74 FGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYL 107
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 36.4 bits (85), Expect = 0.005
Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-----------SGPKHDELGLPNVFKEIDSDADKQLSRE 146
+ ++ D NG I D F P+ + L F+ D + + +S +
Sbjct: 52 IRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTD 111
Query: 147 EVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ E L + +++ + D D +G + +EF
Sbjct: 112 VMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 149
Score = 34.8 bits (81), Expect = 0.013
Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 12/111 (10%)
Query: 86 DVKHMLEEHDKLVEEIFQHEDK-DKNGFISHDEFS------GPKHDELGLPNVFKEIDSD 138
DV + KL+E F+ + + +G +S D+ G + + + + E D
Sbjct: 3 DVSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPF 62
Query: 139 ADKQLSREEVSEYLKKQMVAAEGS-----EVEEIFQHEDKDKNGFISHDEF 184
+ + + + + E+ E F+ DK+ NG+IS D
Sbjct: 63 GNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVM 113
Score = 26.8 bits (60), Expect = 7.9
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 10/67 (14%)
Query: 270 KEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNG 329
E D + + + + + E + +E + E F+ DK+ NG
Sbjct: 57 DEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQ------QE----LREAFRLYDKEGNG 106
Query: 330 FISHDEF 336
+IS D
Sbjct: 107 YISTDVM 113
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 35.1 bits (81), Expect = 0.005
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Query: 110 NGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQ 169
N + + + N F+ + D +S + K ++ E+ I++
Sbjct: 6 NSSYPDEPWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIP--ELSYIWE 63
Query: 170 HEDKDKNGFISHDEFS 185
D D +G ++ EF
Sbjct: 64 LSDADCDGALTLPEFC 79
Score = 34.7 bits (80), Expect = 0.007
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 99 EEIFQHEDKDKNGFISHDE----FSGPKHDELGLPNVFKEIDSDADKQLSREE 147
F+ D + FIS F+ K L +++ D+D D L+ E
Sbjct: 25 VNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPE 77
Score = 30.1 bits (68), Expect = 0.30
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 17/72 (23%)
Query: 48 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 107
N F+ + D +S + K S+ + + I++ D
Sbjct: 25 VNQFRSLQPDPSSFISGSVAKNFFTK-------SKLSIPE----------LSYIWELSDA 67
Query: 108 DKNGFISHDEFS 119
D +G ++ EF
Sbjct: 68 DCDGALTLPEFC 79
Score = 30.1 bits (68), Expect = 0.30
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 17/72 (23%)
Query: 266 TNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDK 325
N F+ + D +S + K S+ + + I++ D
Sbjct: 25 VNQFRSLQPDPSSFISGSVAKNFFTK-------SKLSIPE----------LSYIWELSDA 67
Query: 326 DKNGFISHDEFS 337
D +G ++ EF
Sbjct: 68 DCDGALTLPEFC 79
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y
1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y
3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y
2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Length = 156
Score = 36.0 bits (84), Expect = 0.006
Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 16/109 (14%)
Query: 86 DVKHML-EEHDKLVEEIFQHEDKDKNGFISHDEF--------SGPKHDELGLPNVFKEID 136
V L ++ + ++E F D D++GF+S ++ P EL +
Sbjct: 7 GVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKEL------TAML 60
Query: 137 SDADKQLSREEVSEYLKKQMVAAEG-SEVEEIFQHEDKDKNGFISHDEF 184
+A L+ ++ + + F D+ + ++ +
Sbjct: 61 KEAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYI 109
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 36.3 bits (84), Expect = 0.006
Identities = 22/164 (13%), Positives = 46/164 (28%), Gaps = 40/164 (24%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSE-GAEDVKHMLEEHDK-------LVE--- 99
+ + D Q+ +E+ L + +A E + M+ D+ E
Sbjct: 38 YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKE 97
Query: 100 ---------EIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSE 150
+ F D D++G + E L + Q
Sbjct: 98 LWAVLNGWRQHFISFDTDRSGTVDPQE----------LQKALTTMGFRLSPQAVNSIAKR 147
Query: 151 YLKKQMVAAEG--------SEVEEIFQHEDKDKNGFI--SHDEF 184
Y + + + + F+ D + G + +D+F
Sbjct: 148 YSTNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDF 191
Score = 28.2 bits (63), Expect = 3.4
Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 20/88 (22%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSE-GAEDVKHMLEEHDK-------LVE--- 317
+ + D Q+ +E+ L + +A E + M+ D+ E
Sbjct: 38 YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKE 97
Query: 318 ---------EIFQHEDKDKNGFISHDEF 336
+ F D D++G + E
Sbjct: 98 LWAVLNGWRQHFISFDTDRSGTVDPQEL 125
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of
cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB:
1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S
3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 36.2 bits (84), Expect = 0.007
Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 39/167 (23%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGA----EDVKHMLEEHD--------- 95
+F ++ D D ++S E+ L K + + + + M+ D
Sbjct: 8 RLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGF 66
Query: 96 ----------KLVEEIFQHEDKDKNGFISHDEFSGP-KHDELGLPNVFKEI----DSDAD 140
K + I++ D D++G I E G + L + SD
Sbjct: 67 EEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEG 126
Query: 141 KQLSREE-VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFI--SHDEF 184
+ + +S ++ + F+ DKD G I + E+
Sbjct: 127 GNMDFDNFISCLVRLD-------AMFRAFKSLDKDGTGQIQVNIQEW 166
Score = 27.4 bits (61), Expect = 5.2
Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 24/93 (25%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGA----EDVKHMLEEHD--------- 313
+F ++ D D ++S E+ L K + + + + M+ D
Sbjct: 8 RLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGF 66
Query: 314 ----------KLVEEIFQHEDKDKNGFISHDEF 336
K + I++ D D++G I E
Sbjct: 67 EEFKYLWNNIKKWQAIYKQFDVDRSGTIGSSEL 99
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 37.2 bits (86), Expect = 0.007
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-------SGPKHDELGLPNVFKEIDSDADKQLSREEVSE 150
++++ D D NG I EF E + F+ D D + +S E+
Sbjct: 350 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 409
Query: 151 YLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ EV+E+ + D D +G ++++EF
Sbjct: 410 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 443
Score = 34.9 bits (80), Expect = 0.037
Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 10/136 (7%)
Query: 56 SDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHE-DKDKNGFIS 114
D K E + + +VK + LV I D ++G I
Sbjct: 238 HDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDT---LVNRIELKGIDFKEDGNIL 294
Query: 115 HDEFSGPKHDEL------GLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIF 168
+ D+L F D D D ++ +E+ ++ +E++++
Sbjct: 295 GHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMI 354
Query: 169 QHEDKDKNGFISHDEF 184
D D NG I EF
Sbjct: 355 NEVDADGNGTIDFPEF 370
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping,
EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB:
1h4b_A
Length = 86
Score = 34.2 bits (79), Expect = 0.008
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFSG-------PKHDELGLPNVFKEIDSDADKQLS 144
+ E IF+ D + +G IS E DE + + EID+D D +S
Sbjct: 7 PQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDE--VRRMMAEIDTDGDGFIS 64
Query: 145 REEVSEYLKKQMVAAEGSEVEEIF 168
+E +++ + + +V +IF
Sbjct: 65 FDEFTDFARANRGLVK--DVSKIF 86
Score = 30.3 bits (69), Expect = 0.22
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 16/69 (23%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+FK D++ D ++S E+ + LK GS ++V+ M+ E D D
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTL-----GSVTPDEVRRMMAE-----------IDTDG 59
Query: 110 NGFISHDEF 118
+GFIS DEF
Sbjct: 60 DGFISFDEF 68
Score = 30.3 bits (69), Expect = 0.22
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 16/69 (23%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+FK D++ D ++S E+ + LK GS ++V+ M+ E D D
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTL-----GSVTPDEVRRMMAE-----------IDTDG 59
Query: 328 NGFISHDEF 336
+GFIS DEF
Sbjct: 60 DGFISFDEF 68
Score = 28.4 bits (64), Expect = 0.80
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 154 KQMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
+ + ++ E IF+ D + +G IS E
Sbjct: 3 AEDTPQDIADRERIFKRFDTNGDGKISSSE 32
Score = 27.2 bits (61), Expect = 2.2
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 310 EEHDKLVEEIFQHEDKDKNGFISHDE 335
+ E IF+ D + +G IS E
Sbjct: 7 PQDIADRERIFKRFDTNGDGKISSSE 32
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 35.8 bits (82), Expect = 0.008
Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 19/112 (16%)
Query: 91 LEEHDKLVEEIFQHEDKDKN---GFISHDEF-------SGPKHDELGLPNVFKEIDSDAD 140
++ D+ ++F + + ++ DE + D L F +D +AD
Sbjct: 54 MDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDN-RLRTFFDMVDKNAD 112
Query: 141 KQLSREEVSEYLKKQMVAAEGSEVEE--------IFQHEDKDKNGFISHDEF 184
+L+ EEV E + A + S+++E I + D G+I ++
Sbjct: 113 GRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDL 164
Score = 33.5 bits (76), Expect = 0.058
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 51 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 110
F +D +AD +L+ EEV E + S A + + E D+ I + D
Sbjct: 104 FDMVDKNADGRLTAEEVKEIIAL-------SASANKLSKIKERADEYTALIMEELDPTNL 156
Query: 111 GFISHDEF 118
G+I ++
Sbjct: 157 GYIEMEDL 164
Score = 33.5 bits (76), Expect = 0.058
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 269 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKN 328
F +D +AD +L+ EEV E + S A + + E D+ I + D
Sbjct: 104 FDMVDKNADGRLTAEEVKEIIAL-------SASANKLSKIKERADEYTALIMEELDPTNL 156
Query: 329 GFISHDEF 336
G+I ++
Sbjct: 157 GYIEMEDL 164
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory
light chain LC-2, mantle muscle; rigor-like, squid,
contractIle protein; 2.60A {Todarodes pacificus} PDB:
2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 35.2 bits (82), Expect = 0.009
Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 14/90 (15%)
Query: 106 DKDKNGFISHDEFSG--------PKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMV 157
++G + + P ++ + +K EE+ ++
Sbjct: 21 WDGRDGDVDAAKVGDLLRCLGMNPTEAQV---HQHGGTKKMGEKAYKLEEILPIYEEMSS 77
Query: 158 AAEGSEVEEI---FQHEDKDKNGFISHDEF 184
G+ +E F+ D++ G IS E
Sbjct: 78 KDTGTAADEFMEAFKTFDREGQGLISSAEI 107
Score = 30.2 bits (69), Expect = 0.47
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 37/99 (37%)
Query: 100 EIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAA 159
E F+ D++ G IS E + NV K + E ++E
Sbjct: 89 EAFKTFDREGQGLISSAE----------IRNVLKMLG---------ERITE--------- 120
Query: 160 EGSEVEEIFQHED--KDKNGFISHDEF-----SGPKHDE 191
+ +IF D +D +G I +++ +GP D+
Sbjct: 121 --DQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGPFPDK 157
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 33.7 bits (78), Expect = 0.011
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 34/94 (36%)
Query: 91 LEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSE 150
+ + +E IF+ D + +G IS E L + + + S +EV
Sbjct: 1 MADD---MERIFKRFDTNGDGKISLSE----------LTDALRTLG-----STSADEV-- 40
Query: 151 YLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
++M+A E+ D D +GFI +EF
Sbjct: 41 ---QRMMA----EI-------DTDGDGFIDFNEF 60
Score = 31.4 bits (72), Expect = 0.058
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 16/69 (23%)
Query: 50 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
+FK D++ D ++S E+++ L+ GS A++V+ M+ E D D
Sbjct: 8 IFKRFDTNGDGKISLSELTDALRTL-----GSTSADEVQRMMAEI-----------DTDG 51
Query: 110 NGFISHDEF 118
+GFI +EF
Sbjct: 52 DGFIDFNEF 60
Score = 31.4 bits (72), Expect = 0.058
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 16/69 (23%)
Query: 268 VFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
+FK D++ D ++S E+++ L+ GS A++V+ M+ E D D
Sbjct: 8 IFKRFDTNGDGKISLSELTDALRTL-----GSTSADEVQRMMAEIDT-----------DG 51
Query: 328 NGFISHDEF 336
+GFI +EF
Sbjct: 52 DGFIDFNEF 60
Score = 26.8 bits (60), Expect = 2.5
Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 309 LEEHDKLVEEIFQHEDKDKNGFISHDE 335
+ + +E IF+ D + +G IS E
Sbjct: 1 MADD---MERIFKRFDTNGDGKISLSE 24
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE
calcium entry, signaling protein; NMR {Homo sapiens}
Length = 150
Score = 35.0 bits (80), Expect = 0.011
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 128 LPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
L + K++D D D + EE E++++ M + + EDK I+ ++
Sbjct: 17 LQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNKHSHLHREDK----HITIEDL 69
Score = 29.2 bits (65), Expect = 1.2
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEE 100
+ K++D D D + EE E++++ M + + L DK +
Sbjct: 19 TIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNK----HSHLHREDKHITI 66
Score = 29.2 bits (65), Expect = 1.2
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEE 318
+ K++D D D + EE E++++ M + + L DK +
Sbjct: 19 TIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNK----HSHLHREDKHITI 66
Score = 26.5 bits (58), Expect = 9.2
Identities = 11/59 (18%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 98 VEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDS--DADKQLSREEVSEYLKK 154
++ I + D DK+G I +E +++ + + DK ++ E++ + K
Sbjct: 17 LQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNKHSHLHREDKHITIEDLWKRWKT 75
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15,
EPS15; EH domain, EF-hand, solution structure, S100
protein; NMR {Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 34.0 bits (78), Expect = 0.011
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
Query: 91 LEEHDKLVEEIFQHEDKDKNGFISHDEF------SGPKHDELGLPNVFKEIDSDADKQLS 144
L + + E+ ++ + G + + SG LG ++ D+D LS
Sbjct: 6 LSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILG--KIWDLADTDGKGVLS 63
Query: 145 REE 147
++E
Sbjct: 64 KQE 66
Score = 32.1 bits (73), Expect = 0.054
Identities = 10/56 (17%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 130 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
++++++ ++ + + +LKK + + +I+ D D G +S EF
Sbjct: 15 KYYRQVEAGNTGRVLALDAAAFLKKSGLPDL--ILGKIWDLADTDGKGVLSKQEFF 68
Score = 27.1 bits (60), Expect = 2.9
Identities = 3/28 (10%), Positives = 11/28 (39%)
Query: 309 LEEHDKLVEEIFQHEDKDKNGFISHDEF 336
L + + E+ ++ + G + +
Sbjct: 6 LSSGNPVYEKYYRQVEAGNTGRVLALDA 33
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 33.7 bits (78), Expect = 0.012
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 29/93 (31%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
++ ++ + F+ D + +G I DE + +++ ++ L+
Sbjct: 4 QDDEEEILRAFKVFDANGDGVIDFDE----------FKFIMQKV---GEEPLTDA----- 45
Query: 152 LKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
EVEE + D+D NG I EF
Sbjct: 46 -----------EVEEAMKEADEDGNGVIDIPEF 67
Score = 27.9 bits (63), Expect = 1.2
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 310 EEHDKLVEEIFQHEDKDKNGFISHDEF 336
++ ++ + F+ D + +G I DEF
Sbjct: 4 QDDEEEILRAFKVFDANGDGVIDFDEF 30
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 34.2 bits (79), Expect = 0.019
Identities = 11/97 (11%), Positives = 30/97 (30%), Gaps = 12/97 (12%)
Query: 98 VEEIFQHEDKDKNGFISHDEF-------SGPKHDELGLPNVFKEIDSDADKQLSREE--- 147
+ + +++ + L F + ++ E
Sbjct: 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRR 64
Query: 148 VSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
S L + ++ E + + + + D D +G ++ EF
Sbjct: 65 NSGILGIEGMSKE--DAQGMVREGDLDGDGALNQTEF 99
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain,
EF-SAM, STIM1, store operated calcium entry regulator,
SOCE; NMR {Homo sapiens}
Length = 150
Score = 34.3 bits (78), Expect = 0.020
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 126 LGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ N+ K +D DA+ + EE E+L++ + + + F EDK IS ++
Sbjct: 15 EAVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVKHSTFHGEDK----LISVEDL 69
Score = 28.1 bits (62), Expect = 2.9
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 49 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEG 83
N+ K +D DA+ + EE E+L++ + + +
Sbjct: 19 NIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVK 53
Score = 28.1 bits (62), Expect = 2.9
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 267 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEG 301
N+ K +D DA+ + EE E+L++ + + +
Sbjct: 19 NIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVK 53
Score = 26.9 bits (59), Expect = 7.2
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 98 VEEIFQHEDKDKNGFISHDEFSGPKHDEL--GLPNVFKEIDSDADKQLSREEVSEYLKK 154
V I + D D NG + +E ++L P V DK +S E++ + K
Sbjct: 17 VRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVKHSTFHGEDKLISVEDLWKAWKS 75
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 32.5 bits (75), Expect = 0.022
Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 30/85 (35%)
Query: 100 EIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAA 159
F+ D+D +G I+ DE L + + + +
Sbjct: 10 VAFRAFDQDGDGHITVDE----------LRRAMAGLG---------QPLPQ--------- 41
Query: 160 EGSEVEEIFQHEDKDKNGFISHDEF 184
E++ + + D D++G ++++EF
Sbjct: 42 --EELDAMIREADVDQDGRVNYEEF 64
Score = 27.5 bits (62), Expect = 1.3
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 163 EVEEIFQHEDKDKNGFISHDE 183
+++ F+ D+D +G I+ DE
Sbjct: 7 DLQVAFRAFDQDGDGHITVDE 27
Score = 26.3 bits (59), Expect = 3.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 318 EIFQHEDKDKNGFISHDE 335
F+ D+D +G I+ DE
Sbjct: 10 VAFRAFDQDGDGHITVDE 27
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 31.7 bits (73), Expect = 0.049
Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 30/93 (32%)
Query: 92 EEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEY 151
EE + ++E F D +K G I + E L + + D K
Sbjct: 3 EEQKQEIKEAFDLFDTNKTGSIDYHE----------LKVAMRALGFDVKKP--------- 43
Query: 152 LKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
E+ E+ D++ NG+I D+F
Sbjct: 44 -----------EILELMNEYDREGNGYIGFDDF 65
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 31.9 bits (73), Expect = 0.053
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 30/85 (35%)
Query: 100 EIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAA 159
E F+ EDKD NG+IS E L +V + E++++
Sbjct: 33 EAFRVEDKDGNGYISAAE----------LRHVMTNLG---------EKLTD--------- 64
Query: 160 EGSEVEEIFQHEDKDKNGFISHDEF 184
EV+E+ + D D +G ++++EF
Sbjct: 65 --EEVDEMIREADIDGDGQVNYEEF 87
Score = 27.2 bits (61), Expect = 2.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 163 EVEEIFQHEDKDKNGFISHDEF 184
E+ E F+ EDKD NG+IS E
Sbjct: 30 EIREAFRVEDKDGNGYISAAEL 51
Score = 26.1 bits (58), Expect = 6.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 318 EIFQHEDKDKNGFISHDEF 336
E F+ EDKD NG+IS E
Sbjct: 33 EAFRVEDKDGNGYISAAEL 51
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 33.1 bits (76), Expect = 0.083
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 19/124 (15%)
Query: 72 KKQMVAAEGSEGAEDVKHMLEEHDKLVE--EIFQHEDKDKNGFISHDEFSG--------P 121
K +V M + ++ E E FQ D+DK+GFIS ++
Sbjct: 32 KPPSQKRRAQRSGSNVFAMFTQ-HQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLC 90
Query: 122 KHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAA-EGSEVEEIFQHEDKDKNGFIS 180
EL + ++A ++ ++ E + F D + +G
Sbjct: 91 TEQEL------DSMVAEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCK 143
Query: 181 HDEF 184
+
Sbjct: 144 EETL 147
Score = 27.7 bits (62), Expect = 4.1
Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 8/85 (9%)
Query: 107 KDKNGFISHDEF-------SGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAA 159
+ G I+ F +E + N F D + D + E + L
Sbjct: 100 AEAPGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKF 158
Query: 160 EGSEVEEIFQHEDKDKNGFISHDEF 184
EV++ D NG I +F
Sbjct: 159 SQDEVDQALSEAPIDGNGLIDIKKF 183
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like
domain, actin binding protein, contractIle protein;
20.00A {Gallus gallus} SCOP: i.15.1.1
Length = 863
Score = 33.7 bits (76), Expect = 0.086
Identities = 22/126 (17%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 65 EEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFS----- 119
E++ + + + E D K + +E F H D+ K G + ++F
Sbjct: 694 EQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLIS 753
Query: 120 -GPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE-VEEIFQHEDKDKNG 177
G E + +D + ++ + +++ ++ + ++ V F+ DKN
Sbjct: 754 MGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKN- 812
Query: 178 FISHDE 183
+I+ DE
Sbjct: 813 YITVDE 818
Score = 29.9 bits (66), Expect = 1.6
Identities = 17/153 (11%), Positives = 52/153 (33%), Gaps = 16/153 (10%)
Query: 44 QVTTTNVFKEIDSDADKQLSR-EEVSEYLKKQMVAAEGS-----EGAEDVKHMLEEHDKL 97
Q + K+ + A+ + E + + + G+ + + +
Sbjct: 601 QQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNYKPK 660
Query: 98 VEEIFQHEDKDKNGFISHDEFSGPKHDEL-----GLPNVFKEIDSDADKQLSREEVSEYL 152
++++ + + I ++ + + + L ++ + Q+ +
Sbjct: 661 IDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGIS 720
Query: 153 KKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
++QM +E F H D+ K G + ++F
Sbjct: 721 QEQM-----NEFRASFNHFDRKKTGMMDCEDFR 748
Score = 27.9 bits (61), Expect = 5.5
Identities = 11/55 (20%), Positives = 22/55 (40%)
Query: 283 EEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFS 337
E++ + + + E D K + +E F H D+ K G + ++F
Sbjct: 694 EQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFR 748
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially
structured protein, CAM-like; NMR {Entamoeba
histolytica} PDB: 2lc5_A
Length = 85
Score = 31.1 bits (71), Expect = 0.088
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 30/101 (29%)
Query: 84 AEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQL 143
+E K + E + +E FQ DKD + ++ +E L V + + ++ KQ
Sbjct: 2 SEQKKVLTAEEQQEYKEAFQLFDKDNDNKLTAEE----------LGTVMRALGANPTKQ- 50
Query: 144 SREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
++ EI + DKD +G + F
Sbjct: 51 -------------------KISEIVKDYDKDNSGKFDQETF 72
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 30.7 bits (70), Expect = 0.16
Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 30/85 (35%)
Query: 100 EIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVAA 159
F D D G IS E L V + + + ++
Sbjct: 24 AAFDMFDADGGGDISTKE----------LGTVMRMLG---------QNPTK--------- 55
Query: 160 EGSEVEEIFQHEDKDKNGFISHDEF 184
E++ I + D+D +G I +EF
Sbjct: 56 --EELDAIIEEVDEDGSGTIDFEEF 78
Score = 29.5 bits (67), Expect = 0.43
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 13/48 (27%)
Query: 136 DSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
++A LS E ++E+ + F D D G IS E
Sbjct: 7 QAEARAFLSEEMIAEF-------------KAAFDMFDADGGGDISTKE 41
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 30.0 bits (68), Expect = 0.22
Identities = 15/59 (25%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 130 NVFKEIDS-DADK-QLSREEVSEYLKKQM--VAAEGSEVEEIFQHEDKDKNGFISHDEF 184
++F++ + + D QLS+EE+ + ++ + + ++++FQ DK+ +G +S +EF
Sbjct: 11 SIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEF 69
Score = 26.5 bits (59), Expect = 3.4
Identities = 15/75 (20%), Positives = 36/75 (48%), Gaps = 15/75 (20%)
Query: 46 TTTNVFKEIDS-DADK-QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQ 103
++F++ + + D QLS+EE+ + ++ + + ++++FQ
Sbjct: 8 ELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRT-------------LDDLFQ 54
Query: 104 HEDKDKNGFISHDEF 118
DK+ +G +S +EF
Sbjct: 55 ELDKNGDGEVSFEEF 69
Score = 26.5 bits (59), Expect = 3.4
Identities = 15/75 (20%), Positives = 36/75 (48%), Gaps = 15/75 (20%)
Query: 264 TTTNVFKEIDS-DADK-QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQ 321
++F++ + + D QLS+EE+ + ++ + + ++++FQ
Sbjct: 8 ELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRT-------------LDDLFQ 54
Query: 322 HEDKDKNGFISHDEF 336
DK+ +G +S +EF
Sbjct: 55 ELDKNGDGEVSFEEF 69
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 30.0 bits (68), Expect = 0.30
Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 10/101 (9%)
Query: 64 REEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFS---- 119
+EE + + KQ + ED+ LE +E + D + NG I
Sbjct: 4 QEERLDEINKQFLDDPKYSSDEDLPSKLEG----FKEKYMEFDLNGNGDIDIMSLKRMLE 59
Query: 120 --GPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKKQMVA 158
G L L + E+ S + + S + + + A
Sbjct: 60 KLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSA 100
Score = 28.1 bits (63), Expect = 1.6
Identities = 9/71 (12%), Positives = 18/71 (25%), Gaps = 21/71 (29%)
Query: 132 FKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSG----- 186
F + + + ++ + +E + D + NG I
Sbjct: 15 FLDDPKYSSDEDLPSKLEGF-------------KEKYMEFDLNGNGDIDIMSLKRMLEKL 61
Query: 187 ---PKHDELHD 194
H EL
Sbjct: 62 GVPKTHLELKK 72
Score = 26.2 bits (58), Expect = 7.8
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Query: 282 REEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDE 335
+EE + + KQ + ED+ LE +E + D + NG I
Sbjct: 4 QEERLDEINKQFLDDPKYSSDEDLPSKLEG----FKEKYMEFDLNGNGDIDIMS 53
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 31.5 bits (70), Expect = 0.35
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 55 DSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK-NGFI 113
+ D D L E+ +KK + E + + + V F D+ +G++
Sbjct: 114 ERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPEKNYNMYIFPVHWQFGQLDQHPIDGYL 173
Query: 114 SHDEFSGPKHD----ELGLPNVFKEIDSDADKQLSREE 147
SH E + + E F+ D D DK ++ +E
Sbjct: 174 SHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDE 211
Score = 31.1 bits (69), Expect = 0.41
Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Query: 103 QHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSD-ADKQLSREEVSEYLKKQMVAAEG 161
+ + +K + F ++D D LS E++ L+ ++ E
Sbjct: 132 KIHENEKRLEAGDHPEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAP-LRAPLIPMEH 190
Query: 162 SEVEEIFQHEDKDKNGFISHDEFSG 186
F+ D D + +I+ DE++G
Sbjct: 191 C-TTRFFETCDLDNDKYIALDEWAG 214
Score = 27.6 bits (60), Expect = 6.2
Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 18/71 (25%)
Query: 51 FKEIDSD-ADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 109
F ++D D LS E++ ++ L + F+ D D
Sbjct: 161 FGQLDQHPIDGYLSHTELA-----------------PLRAPLIPMEHCTTRFFETCDLDN 203
Query: 110 NGFISHDEFSG 120
+ +I+ DE++G
Sbjct: 204 DKYIALDEWAG 214
Score = 27.6 bits (60), Expect = 6.2
Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 18/71 (25%)
Query: 269 FKEIDSD-ADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDK 327
F ++D D LS E++ ++ L + F+ D D
Sbjct: 161 FGQLDQHPIDGYLSHTELA-----------------PLRAPLIPMEHCTTRFFETCDLDN 203
Query: 328 NGFISHDEFSG 338
+ +I+ DE++G
Sbjct: 204 DKYIALDEWAG 214
>2chu_A CEUE, enterochelin uptake periplasmic binding protein; iron, mecam,
SELF assembly, siderophore; HET: ECA; 2.40A
{Campylobacter jejuni} SCOP: c.92.2.4
Length = 296
Score = 31.2 bits (71), Expect = 0.38
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 12/79 (15%)
Query: 85 EDVKHMLEEHDKLVEEIFQHEDKDKNGFI-----------SHDEFSGPKHDELGLPNVFK 133
++ + + +E+ D+DK I G HD LG+ V +
Sbjct: 147 KEALEKISDIKNEIEKAKSIVDEDKKALIILTNSNKISAFGPQSRFGIIHDVLGINAVDE 206
Query: 134 EIDSDAD-KQLSREEVSEY 151
I K ++ E + E
Sbjct: 207 NIKVGTHGKSINSEFILEK 225
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 29.0 bits (65), Expect = 0.58
Identities = 10/60 (16%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 130 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSE-----VEEIFQHEDKDKNGFISHDEF 184
F + D L++E++ ++K+ ++ V++I + D+ ++G + F
Sbjct: 13 FTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSF 71
Score = 27.8 bits (62), Expect = 1.7
Identities = 11/73 (15%), Positives = 28/73 (38%), Gaps = 11/73 (15%)
Query: 264 TTTNVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHE 323
T F + D L++E++ ++K+ ++ V++I +
Sbjct: 10 TMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLA----------VDKIMKDL 58
Query: 324 DKDKNGFISHDEF 336
D+ ++G + F
Sbjct: 59 DQCRDGKVGFQSF 71
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1mr8_A
Length = 93
Score = 29.0 bits (65), Expect = 0.63
Identities = 7/46 (15%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 140 DKQLSREEVSEYLKKQMVAA-EGSEVEEIFQHEDKDKNGFISHDEF 184
+ R+++ + L+ + + F+ D + +G ++ EF
Sbjct: 26 FHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEF 71
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos
taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A
1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A
1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 28.3 bits (64), Expect = 0.66
Identities = 12/61 (19%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 128 LPNVFKEIDSDADKQ--LSREEVSEYLKK--QMVAAEGSEVEEIFQHEDKDKNGFISHDE 183
+ F+ + +S+EE+ ++ + S ++E+ + DK+ +G +S +E
Sbjct: 7 IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEE 66
Query: 184 F 184
F
Sbjct: 67 F 67
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 31.0 bits (70), Expect = 0.68
Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 35/146 (23%)
Query: 76 VAAEGSE--GAEDVKHMLEEHDKLVEEIFQHEDKDKNG--FISHDEFSG--PKHDELGLP 129
V ++ E +DVK E I +H +G I + F+G P+ E+
Sbjct: 877 VDSKTKEPVDDKDVKAKYETS------ILEH-----SGIRLIEPELFNGYNPEKKEM--- 922
Query: 130 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKN--GFISHDEFSGP 187
+E+ + D L E S+ +Q G +V+ IF+ + + + P
Sbjct: 923 --IQEVIVEED--LEPFEASKETAEQFKHQHGDKVD-IFEIPETGEYSVKLLKGATLYIP 977
Query: 188 KHDELHDRDQPFTFTLGVGQVIKGWD 213
K F + GQ+ GW+
Sbjct: 978 KALR-------FDRLVA-GQIPTGWN 995
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH
domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A
1f8h_A 1ff1_A
Length = 106
Score = 29.0 bits (65), Expect = 0.70
Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 130 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
+F + + LS ++V L + + + +++ D D +G + DEF+
Sbjct: 19 AIFDSLS-PVNGFLSGDKVKPVLLNSKLPVD--ILGRVWELSDIDHDGMLDRDEFA 71
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens}
PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 28.6 bits (64), Expect = 0.79
Identities = 7/44 (15%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K+L E+ +L K+ + + +++ + D +++ + E+
Sbjct: 35 KELLTRELPSFLGKRT---DEAAFQKLMSNLDSNRDNEVDFQEY 75
Score = 27.1 bits (60), Expect = 2.6
Identities = 8/58 (13%), Positives = 25/58 (43%), Gaps = 10/58 (17%)
Query: 279 QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+L++ E+ E L +++ + G E +++ + D +++ + E+
Sbjct: 28 KLNKSELKELLTRELPSFLGKRTDEAA----------FQKLMSNLDSNRDNEVDFQEY 75
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.5 bits (65), Expect = 0.91
Identities = 9/31 (29%), Positives = 10/31 (32%), Gaps = 12/31 (38%)
Query: 207 QVIKGWDQGLTEMCVGEKRKLTIP---PALA 234
Q +K L KL PALA
Sbjct: 20 QALKKLQASL---------KLYADDSAPALA 41
Score = 28.0 bits (61), Expect = 3.0
Identities = 8/24 (33%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
Query: 5 EKR---------KLTIP---PALA 16
EK+ KL PALA
Sbjct: 18 EKQALKKLQASLKLYADDSAPALA 41
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type
four-helix bundle, metal binding protein; NMR {Rattus
norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A
2l0p_A 2jpt_A
Length = 93
Score = 28.2 bits (63), Expect = 1.2
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K L + E+S +L Q + V++I + D++ +G + EF
Sbjct: 34 KDLLQTELSSFLDVQK---DADAVDKIMKELDENGDGEVDFQEF 74
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO,
EF-hand calcium binding proteins, S100 proteins, protein
dynamics, binding protein; 2.10A {Homo sapiens} PDB:
2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 28.2 bits (63), Expect = 1.2
Identities = 9/44 (20%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+++ ++E++ L +++ Q+ D + +G IS DE+
Sbjct: 37 REMLQKELNHMLSDTG---NRKAADKLIQNLDANHDGRISFDEY 77
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding
protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Length = 113
Score = 28.4 bits (63), Expect = 1.3
Identities = 7/44 (15%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K+L E+ +L K+ + + +++ + D +++ + E+
Sbjct: 47 KELLTRELPSFLGKRT---DEAAFQKLMSNLDSNRDNEVDFQEY 87
Score = 26.8 bits (59), Expect = 4.6
Identities = 8/59 (13%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 278 KQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+L++ E+ E L +++ + G E +++ + D +++ + E+
Sbjct: 39 FKLNKSELKELLTRELPSFLGKRTDEAA----------FQKLMSNLDSNRDNEVDFQEY 87
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100
proteins, EF-; 1.94A {Homo sapiens}
Length = 104
Score = 28.3 bits (63), Expect = 1.5
Identities = 7/44 (15%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K+L E+ +L K+ + + +++ + D +++ + E+
Sbjct: 38 KELLTRELPSWLGKRT---DEAAFQKLMSNLDSNRDNEVDFQEY 78
Score = 26.0 bits (57), Expect = 9.2
Identities = 8/58 (13%), Positives = 25/58 (43%), Gaps = 10/58 (17%)
Query: 279 QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+L++ E+ E L +++ + G E +++ + D +++ + E+
Sbjct: 31 KLNKSELKELLTRELPSWLGKRTDEAA----------FQKLMSNLDSNRDNEVDFQEY 78
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+)
requirement, hydrolase chimera; 2.80A {Rattus
norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Length = 900
Score = 29.7 bits (66), Expect = 1.5
Identities = 22/161 (13%), Positives = 49/161 (30%), Gaps = 29/161 (18%)
Query: 46 TTTNVFKEIDSDA--------DKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKL 97
+FK++D + LS + + +++ E ++
Sbjct: 673 ILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQ 732
Query: 98 VEEIFQHEDKDKNGFISHDEF------SGPKHDELGLPNVFKEI--------DSDADKQL 143
++F + +S E +H +L + DSD +L
Sbjct: 733 FRKLFVQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKL 791
Query: 144 SREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
EE + + I++ + D++G I +E
Sbjct: 792 GFEEFKYLWNNIK------KWQGIYKRFETDRSGTIGSNEL 826
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 28.3 bits (63), Expect = 1.7
Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 130 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
F + ++ ++ + + + + +I+ D + +G + EFS
Sbjct: 37 QQFHSLK-PISGFITGDQARNFFFQSGLPQP--VLAQIWALADMNNDGRMDQVEFS 89
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal
binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A
2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 27.4 bits (61), Expect = 2.0
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 142 QLSREEVSEYLKKQMVAAEGSE-----VEEIFQHEDKDKNGFISHDEF 184
LS+ E+ + L K++ + ++EIFQ D +++ + EF
Sbjct: 30 TLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEF 77
Score = 26.3 bits (58), Expect = 6.2
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 61 QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 118
LS+ E+ + L K++ + + V ++EIFQ D +++ + EF
Sbjct: 30 TLSKGELKQLLTKELANTIKNIKDKAV----------IDEIFQGLDANQDEQVDFQEF 77
Score = 26.3 bits (58), Expect = 6.2
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 279 QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
LS+ E+ + L K++ + + V ++EIFQ D +++ + EF
Sbjct: 30 TLSKGELKQLLTKELANTIKNIKDKAV----------IDEIFQGLDANQDEQVDFQEF 77
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 27.9 bits (62), Expect = 2.0
Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 142 QLSREEVSEYLKKQMVAAEGS-----EVEEIFQHEDKDKNGFISHDEF 184
+L + E+ E L+K++ + + + D +K+ + E+
Sbjct: 28 KLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEY 75
Score = 26.4 bits (58), Expect = 6.2
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 10/58 (17%)
Query: 61 QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 118
+L + E+ E L+K++ +E E + D +K+ + E+
Sbjct: 28 KLCQAELKELLQKELATWTPTEFRECD----------YNKFMSVLDTNKDCEVDFVEY 75
Score = 26.4 bits (58), Expect = 6.2
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 10/58 (17%)
Query: 279 QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+L + E+ E L+K++ +E E + D +K+ + E+
Sbjct: 28 KLCQAELKELLQKELATWTPTEFRECD----------YNKFMSVLDTNKDCEVDFVEY 75
>3nzj_F Proteasome component C1; ubiquitin, protein degradation, N-terminal
nucleophilic HYDR 19S regulatory particle; HET: TY5 TRO
MES; 2.40A {Saccharomyces cerevisiae} PDB: 1z7q_G*
3nzw_F* 3nzx_F* 3un4_F* 3un8_F* 3bdm_F* 1fnt_G* 2zcy_F*
Length = 288
Score = 28.9 bits (65), Expect = 2.5
Identities = 16/118 (13%), Positives = 40/118 (33%), Gaps = 7/118 (5%)
Query: 83 GAEDVKHMLEEHDKLVEEIFQHEDKDKNG----FISHDEFSGPKHDELGLPNVFKEIDSD 138
G + K LE+ E + K +++H++ + K EL + +
Sbjct: 168 GRQSAKAELEKLVDHHPEGLSAREAVKQAAKIIYLAHED-NKEKDFELEISWCSLSETNG 226
Query: 139 ADKQLSREEVSEYLK--KQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSGPKHDELHD 194
K + + + E + ++ + + E E+ + + + D+ D
Sbjct: 227 LHKFVKGDLLQEAIDFAQKEINGDDDEDEDDSDNVMSSDDENAPVATNANATTDQEGD 284
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium,
polymorphism, structural genomics, spine2, structural
proteomics in europe, spine; NMR {Homo sapiens} PDB:
2kay_A
Length = 92
Score = 27.4 bits (61), Expect = 2.5
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSE--VEEIFQHEDKDKNGFISHDEF 184
LSR+E+ E +KK++ E E ++++ + DK+ + I E+
Sbjct: 27 LTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEY 72
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein;
HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB:
1irj_A*
Length = 113
Score = 27.6 bits (61), Expect = 2.9
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K+L R+++ +LKK+ + +E I + D + + +S +EF
Sbjct: 37 KELVRKDLQNFLKKENKNEK--VIEHIMEDLDTNADKQLSFEEF 78
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding
protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A
1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X*
3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A*
3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Length = 92
Score = 27.1 bits (60), Expect = 3.0
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
K+L E+S +L++ E V+++ + D + +G EF
Sbjct: 34 KELINNELSHFLEEIK---EQEVVDKVMETLDSNGDGECDFQEF 74
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase,
chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1
d.241.2.1 d.26.1.1 PDB: 1l1p_A
Length = 392
Score = 28.8 bits (65), Expect = 3.0
Identities = 36/180 (20%), Positives = 66/180 (36%), Gaps = 35/180 (19%)
Query: 136 DSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDK---DKNGFISHDEFSGPKHDEL 192
D+D + L E L+KQ A EV+E ++ + D G I EF G K
Sbjct: 137 DADVAEML------ETLRKQQ--ATWKEVDEAAENGKRVSIDFVGSIDGVEFEGGK---- 184
Query: 193 HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIP-PALAYGDRGAGNVIPGGATLT 251
+ F +G G++I G++ G+ G + + + P D A N+ G
Sbjct: 185 ---AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPE----DYHAENLK--GKAAK 235
Query: 252 FEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVS-----EYLKKQMVAAEGSEGAEDVK 306
F +++ + + E++ + + E ++K M +K
Sbjct: 236 FAIKVNKVEARELP-----ELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIK 290
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100
protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB:
2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Length = 100
Score = 27.1 bits (60), Expect = 3.0
Identities = 8/63 (12%), Positives = 26/63 (41%), Gaps = 8/63 (12%)
Query: 56 SDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISH 115
+ D ++ + + +K+ + ++ + ++F+ +DK+++ I
Sbjct: 20 TRRDDKIDKPSLLTMMKENF--------PNFLSACDKKGTNYLADVFEKKDKNEDKKIDF 71
Query: 116 DEF 118
EF
Sbjct: 72 SEF 74
Score = 27.1 bits (60), Expect = 3.0
Identities = 8/63 (12%), Positives = 26/63 (41%), Gaps = 8/63 (12%)
Query: 274 SDADKQLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISH 333
+ D ++ + + +K+ + ++ + ++F+ +DK+++ I
Sbjct: 20 TRRDDKIDKPSLLTMMKENF--------PNFLSACDKKGTNYLADVFEKKDKNEDKKIDF 71
Query: 334 DEF 336
EF
Sbjct: 72 SEF 74
Score = 26.7 bits (59), Expect = 4.6
Identities = 8/55 (14%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 137 SDADKQLSREEVSEYLKKQM-------VAAEGSEVEEIFQHEDKDKNGFISHDEF 184
+ D ++ + + +K+ + + ++F+ +DK+++ I EF
Sbjct: 20 TRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEF 74
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein,
EF-hand, calcium regulation, oligomer neuronal
development, spine2; 2.03A {Danio rerio}
Length = 99
Score = 27.1 bits (60), Expect = 3.2
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSE-----VEEIFQHEDKDKNGFISHDEF 184
+LS+ E+ E L ++ S+ VE+I D +K+ + +EF
Sbjct: 27 YKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEF 75
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100
family, EF-hand protein, complex (ligand/annexin),
ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2
PDB: 1nsh_A
Length = 99
Score = 27.1 bits (60), Expect = 3.2
Identities = 7/44 (15%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 141 KQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEF 184
E++ + + Q + ++ + + D D +G + EF
Sbjct: 38 LIFMNTELAAFTQNQ---KDPGVLDRMMKKLDLDSDGQLDFQEF 78
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A
{Homo sapiens} SCOP: a.39.1.3
Length = 151
Score = 27.9 bits (61), Expect = 3.3
Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 8/117 (6%)
Query: 76 VAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNV---- 131
V E ED + E+ V++I ++E + + G + + +
Sbjct: 22 VLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNYNMYIFPVHW 81
Query: 132 -FKEIDSD-ADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFSG 186
F ++D D LS E++ L+ ++ E F+ D D + +I+ DE++G
Sbjct: 82 QFGQLDQHPIDGYLSHTELAP-LRAPLIPMEHC-TTRFFETCDLDNDKYIALDEWAG 136
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein;
2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A
2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Length = 106
Score = 27.1 bits (60), Expect = 3.8
Identities = 8/45 (17%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 142 QLSREEVSEYLKKQM--VAAEGSEVEEIFQHEDKDKNGFISHDEF 184
LS E E + +Q+ + + ++E + D +++ + +E+
Sbjct: 40 SLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEY 84
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 26.7 bits (59), Expect = 3.9
Identities = 8/48 (16%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 142 QLSREEVSEYLKKQMVAAEGS-----EVEEIFQHEDKDKNGFISHDEF 184
L++ E+ ++K++ S V+++ + D + + + EF
Sbjct: 27 TLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEF 74
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor
supressor, CAL binding protein; 1.30A {Homo sapiens}
PDB: 2rgi_A 4duq_A
Length = 98
Score = 26.7 bits (59), Expect = 3.9
Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 142 QLSREEVSEYLKKQMVAAEGS-----EVEEIFQHEDKDKNGFISHDEF 184
+LS+ E+ E L K++ + G ++++ D++ + + E+
Sbjct: 29 KLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEY 76
Score = 25.9 bits (57), Expect = 8.6
Identities = 10/58 (17%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 61 QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 118
+LS+ E+ E L K++ + G + E+ ++++ D++ + + E+
Sbjct: 29 KLSKGEMKELLHKELPSFVGEKVDEEG----------LKKLMGSLDENSDQQVDFQEY 76
Score = 25.9 bits (57), Expect = 8.6
Identities = 10/58 (17%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 279 QLSREEVSEYLKKQMVAAEGSEGAEDVKHMLEEHDKLVEEIFQHEDKDKNGFISHDEF 336
+LS+ E+ E L K++ + G + E+ ++++ D++ + + E+
Sbjct: 29 KLSKGEMKELLHKELPSFVGEKVDEEG----------LKKLMGSLDENSDQQVDFQEY 76
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free,
signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A
2cnp_A 2jtt_A
Length = 90
Score = 26.7 bits (59), Expect = 4.5
Identities = 9/46 (19%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 142 QLSREEVSEYLKKQM---VAAEGSEVEEIFQHEDKDKNGFISHDEF 184
LS++E+ E ++K++ + +E+ + + D++K+ ++ E+
Sbjct: 28 TLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEY 73
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo
sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Length = 139
Score = 27.2 bits (60), Expect = 4.9
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 130 NVFKEIDSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDKDKNGFISHDEFS 185
+F + + +++ + + K + + +I++ D DK+G + +EF+
Sbjct: 55 EIFYTLS-PVNGKITGANAKKEMVKSKLPNT--VLGKIWKLADVDKDGLLDDEEFA 107
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated
protein, nascent chain, cell division, isomerase; 2.7A
{Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1
PDB: 2vrh_A 1w2b_5
Length = 432
Score = 27.6 bits (62), Expect = 6.8
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 136 DSDADKQLSREEVSEYLKKQMVAAEGSEVEEIFQHEDK---DKNGFISHDEFSGPKHDEL 192
D+D D L + L+KQ A E + + ED+ D G + +EF G K
Sbjct: 134 DADVDGML------DTLRKQQ--ATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGK---- 181
Query: 193 HDRDQPFTFTLGVGQVIKGWDQGLTEMCVGEKRKLTIP-PALAYGDRGAGNVIPGGATLT 251
F +G G++I G++ G+ GE+ + + P + A N+ G
Sbjct: 182 ---ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPE----EYHAENLK--GKAAK 232
Query: 252 FEVELLSIGDQVTTTNVFKEIDSDADKQLSREEVS-EYLKKQMVAAEGSEGAEDVKHMLE 310
F + L + ++ E+ ++ K+ E+ S E L+ ++ E +++ ++
Sbjct: 233 FAINLKKVEERELP-----ELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVK 287
Query: 311 EH--DKLVE 317
+ LV+
Sbjct: 288 SQAIEGLVK 296
>3rj1_B Mediator of RNA polymerase II transcription subun; RNA polymeras
II, POL II, head module, head, regulator, helical
bundle; 4.30A {Saccharomyces cerevisiae}
Length = 583
Score = 27.6 bits (60), Expect = 7.0
Identities = 13/81 (16%), Positives = 24/81 (29%)
Query: 95 DKLVEEIFQHEDKDKNGFISHDEFSGPKHDELGLPNVFKEIDSDADKQLSREEVSEYLKK 154
+L EI Q +G S + + + + + F E+D + K
Sbjct: 25 KELQNEIKQLGSDSSDGHNSEKKDTDGADENVQIGEDFMEVDYEDKDNPVDSRNETDHKT 84
Query: 155 QMVAAEGSEVEEIFQHEDKDK 175
+E + E K
Sbjct: 85 NENGETDDNIETVMTQEQFVK 105
>3gfv_A Uncharacterized ABC transporter solute-binding protein YCLQ;
alpha-beta-sandwich, periplasmic binding protein fold
(PBP fold); 1.75A {Bacillus subtilis subsp}
Length = 303
Score = 27.4 bits (61), Expect = 8.0
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 13/80 (16%)
Query: 85 EDVKHMLEEHDKLVEEIFQ-HEDKDKNGFI-----------SHDEFSGPKHDELGLPNVF 132
+ VK L D + ++ + E +KNG + G HD G+
Sbjct: 147 DKVKDELANIDHSIADVKKTAEKLNKNGLVIMANDGKISAFGPKSRYGLIHDVFGVAPAD 206
Query: 133 KEIDSDAD-KQLSREEVSEY 151
+ I + + +S E +S+
Sbjct: 207 QNIKASTHGQSVSYEYISKT 226
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand,
cytosolic, calcium, coiled coil, disease mutation,
glycoprotein, ION transport; NMR {Homo sapiens} PDB:
2kle_A 2kq6_A 2y4q_A
Length = 123
Score = 26.2 bits (57), Expect = 9.6
Identities = 12/86 (13%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 37 ELLSIGDQVTTTNVFKEIDSDADKQLS-REEVSEYLKKQMVAAEGSEGAEDVKHMLEEH- 94
+L ++ +++ ++ A +L ++ + + + + G ++++ L+
Sbjct: 17 DLAQQKAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGGGKLNFDELRQDLKGKG 76
Query: 95 --DKLVEEIFQHEDKDKNGFISHDEF 118
D +E IF D+D + ++ E
Sbjct: 77 HTDAEIEAIFTKYDQDGDQELTEHEH 102
Score = 26.2 bits (57), Expect = 9.6
Identities = 12/86 (13%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 255 ELLSIGDQVTTTNVFKEIDSDADKQLS-REEVSEYLKKQMVAAEGSEGAEDVKHMLEEH- 312
+L ++ +++ ++ A +L ++ + + + + G ++++ L+
Sbjct: 17 DLAQQKAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGGGKLNFDELRQDLKGKG 76
Query: 313 --DKLVEEIFQHEDKDKNGFISHDEF 336
D +E IF D+D + ++ E
Sbjct: 77 HTDAEIEAIFTKYDQDGDQELTEHEH 102
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.311 0.133 0.373
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,283,139
Number of extensions: 338001
Number of successful extensions: 2704
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1873
Number of HSP's successfully gapped: 882
Length of query: 344
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 250
Effective length of database: 4,077,219
Effective search space: 1019304750
Effective search space used: 1019304750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.0 bits)