Your job contains 1 sequence.
>psy10593
MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN
NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPIENGDIVHHFQEIGE
QQAKPYRDLTLHLLNKEEGNKVKAEIEQILDKKYISFLKQQNSWPFTEDSAEDKAKSNCE
DSDDEMLNGNLNRRNNVMTEFSNRTKSGQFSTVIWYWYLRYIKHRCNKKFLELEIFYGHP
KCEVEVITKSHQFITDDRTASTRVHGLFSLIRAEN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10593
(275 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|J9NXA5 - symbol:EIF1AD "Uncharacterized protein... 291 1.1e-25 1
UNIPROTKB|F1RU32 - symbol:LOC100623051 "Uncharacterized p... 290 1.4e-25 1
UNIPROTKB|Q58CY2 - symbol:EIF1AD "Probable RNA-binding pr... 288 2.2e-25 1
UNIPROTKB|E9PLI6 - symbol:EIF1AD "Probable RNA-binding pr... 288 2.2e-25 1
UNIPROTKB|E9PRR8 - symbol:EIF1AD "Probable RNA-binding pr... 288 2.2e-25 1
UNIPROTKB|E9PS76 - symbol:EIF1AD "Probable RNA-binding pr... 288 2.2e-25 1
UNIPROTKB|Q8N9N8 - symbol:EIF1AD "Probable RNA-binding pr... 288 2.2e-25 1
RGD|1304686 - symbol:Eif1ad "eukaryotic translation initi... 287 2.9e-25 1
MGI|MGI:1917110 - symbol:Eif1ad "eukaryotic translation i... 286 3.6e-25 1
ZFIN|ZDB-GENE-040426-1199 - symbol:eif1ad "eukaryotic tra... 274 6.8e-24 1
UNIPROTKB|Q6K1L7 - symbol:eif1ad "Probable RNA-binding pr... 266 4.8e-23 1
UNIPROTKB|Q29MZ0 - symbol:GA16587 "Probable RNA-binding p... 253 1.1e-21 1
UNIPROTKB|E9PS30 - symbol:EIF1AD "Probable RNA-binding pr... 246 6.3e-21 1
FB|FBgn0051957 - symbol:CG31957 species:7227 "Drosophila ... 241 2.1e-20 1
WB|WBGene00014112 - symbol:ZK856.11 species:6239 "Caenorh... 239 3.5e-20 1
DICTYBASE|DDB_G0292138 - symbol:DDB_G0292138 "Probable RN... 150 2.0e-10 1
UNIPROTKB|E9PNH5 - symbol:EIF1AD "Probable RNA-binding pr... 148 3.4e-10 1
UNIPROTKB|E9PQD0 - symbol:EIF1AD "Probable RNA-binding pr... 132 2.2e-08 1
ASPGD|ASPL0000052694 - symbol:AN0105 species:162425 "Emer... 117 1.0e-06 1
POMBASE|SPBC146.08c - symbol:SPBC146.08c "translation ini... 113 2.8e-06 1
TAIR|locus:2064864 - symbol:AT2G40780 species:3702 "Arabi... 114 3.5e-05 1
>UNIPROTKB|J9NXA5 [details] [associations]
symbol:EIF1AD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR001253 InterPro:IPR006196
Pfam:PF01176 PROSITE:PS50832 SMART:SM00652 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 CTD:84285
GeneTree:ENSGT00390000011180 KO:K15025 OMA:AEPQLSG
EMBL:AAEX03011631 RefSeq:XP_533226.1 ProteinModelPortal:J9NXA5
Ensembl:ENSCAFT00000044182 GeneID:476017 KEGG:cfa:476017
Uniprot:J9NXA5
Length = 166
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 59/125 (47%), Positives = 82/125 (65%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+ATKRKHV KE+L E+ VP D IV++ + GNNLH++E G+++ VSMP K+R
Sbjct: 1 MSQATKRKHVVKEVLG-EHMVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRK 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPIENGDIVHHFQEIGE 120
NIWIK GDF+IV PIEEG KVKAEI +L K ++ L+++ L P ++
Sbjct: 60 NIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKE-GLWPEAFSEVAEKHNNNRN 118
Query: 121 QQAKP 125
+Q +P
Sbjct: 119 RQTQP 123
>UNIPROTKB|F1RU32 [details] [associations]
symbol:LOC100623051 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR001253 InterPro:IPR006196 Pfam:PF01176
PROSITE:PS50832 SMART:SM00652 GO:GO:0003743 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GeneTree:ENSGT00390000011180
KO:K15025 OMA:AEPQLSG EMBL:CU928325 EMBL:CU694743
RefSeq:XP_003122556.1 RefSeq:XP_003122557.1 RefSeq:XP_003353821.1
RefSeq:XP_003353822.1 UniGene:Ssc.51901 Ensembl:ENSSSCT00000014168
Ensembl:ENSSSCT00000023081 GeneID:100522537 GeneID:100623051
KEGG:ssc:100522537 KEGG:ssc:100623051 Uniprot:F1RU32
Length = 166
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+ATKRKHV KE+L E+ VP D IV++ + GNNLH++E G+ + VSMP K+R
Sbjct: 1 MSQATKRKHVVKEVLG-EHMVPSDRQQIVRVLRTPGNNLHEVETAQGQHFLVSMPSKYRK 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPIENGDIVHHFQEIGE 120
NIWIK GDF+IV PIEEG KVKAEI +L + ++ L+++ L P ++ +
Sbjct: 60 NIWIKRGDFLIVDPIEEGEKVKAEISFVLCRNHVRALQKE-GLWPQAFSEVAEKHDDNSN 118
Query: 121 QQAKP 125
+Q +P
Sbjct: 119 RQTQP 123
>UNIPROTKB|Q58CY2 [details] [associations]
symbol:EIF1AD "Probable RNA-binding protein EIF1AD"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
InterPro:IPR001253 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
SMART:SM00652 GO:GO:0005634 GO:GO:0003743 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:BT021815 EMBL:BC120113
EMBL:DQ404153 IPI:IPI00710577 RefSeq:NP_001069861.1 UniGene:Bt.1633
ProteinModelPortal:Q58CY2 SMR:Q58CY2 PRIDE:Q58CY2
Ensembl:ENSBTAT00000026889 GeneID:615726 KEGG:bta:615726 CTD:84285
eggNOG:NOG316136 GeneTree:ENSGT00390000011180 HOGENOM:HOG000007486
HOVERGEN:HBG097893 InParanoid:Q58CY2 KO:K15025 OMA:AEPQLSG
OrthoDB:EOG44QT26 NextBio:20899760 Uniprot:Q58CY2
Length = 166
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 55/99 (55%), Positives = 73/99 (73%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+ATKRKHV KE+L E+ VP D IV++ + GNNLH++E G+++ VSMP K+R
Sbjct: 1 MSQATKRKHVVKEVLG-EHMVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRK 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQ 99
NIWIK GDF+IV PIEEG KVKAEI +L K ++ L++
Sbjct: 60 NIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQK 98
>UNIPROTKB|E9PLI6 [details] [associations]
symbol:EIF1AD "Probable RNA-binding protein EIF1AD"
species:9606 "Homo sapiens" [GO:0003743 "translation initiation
factor activity" evidence=IEA] InterPro:IPR001253
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 SMART:SM00652
GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AP006287 HGNC:HGNC:28147 IPI:IPI00978664
ProteinModelPortal:E9PLI6 SMR:E9PLI6 Ensembl:ENST00000532707
ArrayExpress:E9PLI6 Bgee:E9PLI6 Uniprot:E9PLI6
Length = 113
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 55/100 (55%), Positives = 74/100 (74%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+ATKRKHV KE+L E+ VP D IV++ + GNNLH++E G+++ VSMP K+R
Sbjct: 1 MSQATKRKHVVKEVLG-EHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRK 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQ 100
NIWIK GDF+IV PIEEG KVKAEI +L K ++ L+++
Sbjct: 60 NIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKE 99
>UNIPROTKB|E9PRR8 [details] [associations]
symbol:EIF1AD "Probable RNA-binding protein EIF1AD"
species:9606 "Homo sapiens" [GO:0003743 "translation initiation
factor activity" evidence=IEA] InterPro:IPR001253
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 SMART:SM00652
GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AP006287 HGNC:HGNC:28147 IPI:IPI00980832
ProteinModelPortal:E9PRR8 SMR:E9PRR8 Ensembl:ENST00000529964
ArrayExpress:E9PRR8 Bgee:E9PRR8 Uniprot:E9PRR8
Length = 146
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 55/100 (55%), Positives = 74/100 (74%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+ATKRKHV KE+L E+ VP D IV++ + GNNLH++E G+++ VSMP K+R
Sbjct: 1 MSQATKRKHVVKEVLG-EHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRK 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQ 100
NIWIK GDF+IV PIEEG KVKAEI +L K ++ L+++
Sbjct: 60 NIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKE 99
>UNIPROTKB|E9PS76 [details] [associations]
symbol:EIF1AD "Probable RNA-binding protein EIF1AD"
species:9606 "Homo sapiens" [GO:0003743 "translation initiation
factor activity" evidence=IEA] InterPro:IPR001253
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 SMART:SM00652
GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AP006287 HGNC:HGNC:28147 IPI:IPI00981348
ProteinModelPortal:E9PS76 SMR:E9PS76 Ensembl:ENST00000530462
ArrayExpress:E9PS76 Bgee:E9PS76 Uniprot:E9PS76
Length = 114
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 55/100 (55%), Positives = 74/100 (74%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+ATKRKHV KE+L E+ VP D IV++ + GNNLH++E G+++ VSMP K+R
Sbjct: 1 MSQATKRKHVVKEVLG-EHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRK 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQ 100
NIWIK GDF+IV PIEEG KVKAEI +L K ++ L+++
Sbjct: 60 NIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKE 99
>UNIPROTKB|Q8N9N8 [details] [associations]
symbol:EIF1AD "Probable RNA-binding protein EIF1AD"
species:9606 "Homo sapiens" [GO:0003743 "translation initiation
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001253 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
SMART:SM00652 GO:GO:0005634 EMBL:CH471076 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 CTD:84285
eggNOG:NOG316136 HOGENOM:HOG000007486 HOVERGEN:HBG097893 KO:K15025
OMA:AEPQLSG OrthoDB:EOG44QT26 EMBL:AK094129 EMBL:AK311891
EMBL:BC005131 IPI:IPI00298618 RefSeq:NP_001229410.1
RefSeq:NP_001229411.1 RefSeq:NP_001229412.1 RefSeq:NP_001229413.1
RefSeq:NP_001229414.1 RefSeq:NP_001229415.1 RefSeq:NP_115701.2
UniGene:Hs.425178 PDB:2DGY PDBsum:2DGY ProteinModelPortal:Q8N9N8
SMR:Q8N9N8 IntAct:Q8N9N8 MINT:MINT-1479911 STRING:Q8N9N8
PhosphoSite:Q8N9N8 DMDM:74729733 PaxDb:Q8N9N8 PeptideAtlas:Q8N9N8
PRIDE:Q8N9N8 DNASU:84285 Ensembl:ENST00000312234
Ensembl:ENST00000526451 Ensembl:ENST00000527249
Ensembl:ENST00000533544 GeneID:84285 KEGG:hsa:84285 UCSC:uc001ogm.2
GeneCards:GC11M065764 HGNC:HGNC:28147 neXtProt:NX_Q8N9N8
PharmGKB:PA162384553 InParanoid:Q8N9N8 PhylomeDB:Q8N9N8
EvolutionaryTrace:Q8N9N8 GenomeRNAi:84285 NextBio:73898
ArrayExpress:Q8N9N8 Bgee:Q8N9N8 CleanEx:HS_EIF1AD
Genevestigator:Q8N9N8 Uniprot:Q8N9N8
Length = 165
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 55/100 (55%), Positives = 74/100 (74%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+ATKRKHV KE+L E+ VP D IV++ + GNNLH++E G+++ VSMP K+R
Sbjct: 1 MSQATKRKHVVKEVLG-EHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRK 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQ 100
NIWIK GDF+IV PIEEG KVKAEI +L K ++ L+++
Sbjct: 60 NIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKE 99
>RGD|1304686 [details] [associations]
symbol:Eif1ad "eukaryotic translation initiation factor 1A
domain containing" species:10116 "Rattus norvegicus" [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001253 InterPro:IPR006196
Pfam:PF01176 PROSITE:PS50832 SMART:SM00652 RGD:1304686
GO:GO:0005634 GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 CTD:84285 eggNOG:NOG316136
GeneTree:ENSGT00390000011180 HOGENOM:HOG000007486
HOVERGEN:HBG097893 KO:K15025 OMA:AEPQLSG OrthoDB:EOG44QT26
EMBL:BC085818 IPI:IPI00371430 RefSeq:NP_001008306.1 UniGene:Rn.4163
ProteinModelPortal:Q5RKI6 SMR:Q5RKI6 Ensembl:ENSRNOT00000027753
GeneID:293673 KEGG:rno:293673 InParanoid:Q5RKI6 NextBio:636704
Genevestigator:Q5RKI6 Uniprot:Q5RKI6
Length = 167
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 60/128 (46%), Positives = 83/128 (64%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+A+KRKHV +E+L E+ VP D IVK+ + GNNLH++E G+++ VSMP K+R
Sbjct: 1 MSQASKRKHVVQEVLG-EHMVPSDQQQIVKVLRTPGNNLHEVETAQGQRFLVSMPSKYRK 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPIENGDIVHHFQEIGE 120
NIWIK GDF+IV PIEEG KVKAEI +L K ++ L+++ P F E+ E
Sbjct: 60 NIWIKRGDFLIVDPIEEGEKVKAEISFVLCKNHVRSLQKEGHWPEA--------FSEVAE 111
Query: 121 QQAKPYRD 128
+Q R+
Sbjct: 112 KQNNVNRE 119
>MGI|MGI:1917110 [details] [associations]
symbol:Eif1ad "eukaryotic translation initiation factor 1A
domain containing" species:10090 "Mus musculus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001253
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 SMART:SM00652
MGI:MGI:1917110 GO:GO:0005634 GO:GO:0003743 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 CTD:84285 eggNOG:NOG316136
GeneTree:ENSGT00390000011180 HOGENOM:HOG000007486
HOVERGEN:HBG097893 KO:K15025 OMA:AEPQLSG OrthoDB:EOG44QT26
EMBL:AK008070 EMBL:AK153194 EMBL:AK158977 EMBL:AK168598
EMBL:AK168102 EMBL:AK168253 EMBL:BC024640 IPI:IPI00169734
RefSeq:NP_081512.1 UniGene:Mm.299167 ProteinModelPortal:Q3THJ3
SMR:Q3THJ3 PhosphoSite:Q3THJ3 PaxDb:Q3THJ3 PRIDE:Q3THJ3
Ensembl:ENSMUST00000025759 GeneID:69860 KEGG:mmu:69860
UCSC:uc008gct.1 InParanoid:Q3THJ3 NextBio:330481 Bgee:Q3THJ3
Genevestigator:Q3THJ3 Uniprot:Q3THJ3
Length = 170
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 60/128 (46%), Positives = 83/128 (64%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+A+KRKHV +E+L E+ VP D IVK+ + GNNLH++E G+++ VSMP K+R
Sbjct: 1 MSQASKRKHVVQEVLG-EHMVPSDHQQIVKVLRTPGNNLHEVETAQGQRFLVSMPSKYRK 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPIENGDIVHHFQEIGE 120
NIWIK GDF+IV PIEEG KVKAEI +L K ++ L+++ P F E+ E
Sbjct: 60 NIWIKRGDFLIVDPIEEGEKVKAEISFVLCKNHVRSLQKEGHWPEA--------FSEVAE 111
Query: 121 QQAKPYRD 128
+Q R+
Sbjct: 112 KQNNMNRE 119
>ZFIN|ZDB-GENE-040426-1199 [details] [associations]
symbol:eif1ad "eukaryotic translation initiation
factor 1A domain containing" species:7955 "Danio rerio" [GO:0006413
"translational initiation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
ZFIN:ZDB-GENE-040426-1199 GO:GO:0005634 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 CTD:84285
eggNOG:NOG316136 HOGENOM:HOG000007486 HOVERGEN:HBG097893 KO:K15025
OrthoDB:EOG44QT26 EMBL:BC055173 IPI:IPI00481524 RefSeq:NP_956762.1
UniGene:Dr.95613 ProteinModelPortal:Q7SY07 SMR:Q7SY07 PRIDE:Q7SY07
GeneID:393440 KEGG:dre:393440 InParanoid:Q7SY07 NextBio:20814477
Uniprot:Q7SY07
Length = 172
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 72/182 (39%), Positives = 103/182 (56%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MSKATKRKHV KE+L ++Y P + I+++ ++GNNLH+ SGE++ +SMP KFR
Sbjct: 1 MSKATKRKHVVKEVL-EDYVTPTEDQQIMRVLGSNGNNLHEAVTGSGERFLLSMPTKFRK 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPIENGDIVHHFQE--- 117
NIWIK GDFVIV PI+EG KVK EI IL + +I L+ KL G FQE
Sbjct: 60 NIWIKRGDFVIVDPIKEGGKVKGEISFILYRDHIQHLR---KLGVWPEG-----FQEDRT 111
Query: 118 IGEQQAKPYRDLTLHLLNKEEGNKVKAEIEQIL--DKKYISFLKQQNSWPFTEDSAEDKA 175
GE+ ++ + +EEG+ + + L + + L ++ ED EDK
Sbjct: 112 SGERNEGTQKERSEEK-EEEEGDSESEDDDSDLFVNTNRATVLYSESEEETDEDEEEDKG 170
Query: 176 KS 177
++
Sbjct: 171 RA 172
>UNIPROTKB|Q6K1L7 [details] [associations]
symbol:eif1ad "Probable RNA-binding protein EIF1AD"
species:9031 "Gallus gallus" [GO:0003743 "translation initiation
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 GO:GO:0005634
GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
CTD:84285 HOVERGEN:HBG097893 KO:K15025 EMBL:AY103477
IPI:IPI00584105 RefSeq:NP_001001612.1 UniGene:Gga.1097
ProteinModelPortal:Q6K1L7 SMR:Q6K1L7 GeneID:414740 KEGG:gga:414740
NextBio:20818710 Uniprot:Q6K1L7
Length = 188
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 49/100 (49%), Positives = 74/100 (74%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+ATKRKHV +E+L +E+ VP IV++ + GNNLH++E G ++ SMP +FR+
Sbjct: 1 MSRATKRKHVTREVL-EEHVVPAPQQRIVRVLGSPGNNLHEVETADGSRFLASMPPRFRH 59
Query: 61 NIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQ 100
++WIK GDF++V PIEEG KVKAE+ +L + ++ FL++Q
Sbjct: 60 HVWIKRGDFLLVDPIEEGAKVKAEMALVLLRPHVRFLQRQ 99
>UNIPROTKB|Q29MZ0 [details] [associations]
symbol:GA16587 "Probable RNA-binding protein EIF1AD"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH379060
eggNOG:NOG316136 KO:K15025 OMA:AEPQLSG OrthoDB:EOG45X6CM
RefSeq:XP_001356489.1 ProteinModelPortal:Q29MZ0 SMR:Q29MZ0
GeneID:4817283 KEGG:dpo:Dpse_GA16587 FlyBase:FBgn0076602
InParanoid:Q29MZ0 Uniprot:Q29MZ0
Length = 163
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 43/92 (46%), Positives = 68/92 (73%)
Query: 5 TKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHS--GEKYFVSMPGKFRNNI 62
T+RKH+ KE++ +Y +P + IV++ ++ GNNLH++E + E + VSMP K+R N+
Sbjct: 9 TRRKHLIKEMMEDDYELPTEQQQIVRVVRSCGNNLHEVETATPESENFLVSMPNKYRKNM 68
Query: 63 WIKPGDFVIVKPIEEGNKVKAEIEQILDKKYI 94
W+K GDF++V+PIEEG+KVKAEI +IL ++
Sbjct: 69 WVKRGDFLLVEPIEEGDKVKAEISKILTNDHV 100
>UNIPROTKB|E9PS30 [details] [associations]
symbol:EIF1AD "Probable RNA-binding protein EIF1AD"
species:9606 "Homo sapiens" [GO:0003743 "translation initiation
factor activity" evidence=IEA] InterPro:IPR006196 Pfam:PF01176
PROSITE:PS50832 GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AP006287 HGNC:HGNC:28147 IPI:IPI00976744
ProteinModelPortal:E9PS30 SMR:E9PS30 Ensembl:ENST00000527051
ArrayExpress:E9PS30 Bgee:E9PS30 Uniprot:E9PS30
Length = 78
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 46/78 (58%), Positives = 59/78 (75%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS+ATKRKHV KE+L E+ VP D IV++ + GNNLH++E G+++ VSMP K+R
Sbjct: 1 MSQATKRKHVVKEVLG-EHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRK 59
Query: 61 NIWIKPGDFVIVKPIEEG 78
NIWIK GDF+IV PIEEG
Sbjct: 60 NIWIKRGDFLIVDPIEEG 77
>FB|FBgn0051957 [details] [associations]
symbol:CG31957 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR006196
Pfam:PF01176 PROSITE:PS50832 EMBL:AE014134 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
eggNOG:NOG316136 GeneTree:ENSGT00390000011180 KO:K15025 OMA:AEPQLSG
EMBL:BT025911 RefSeq:NP_722949.1 UniGene:Dm.18349
ProteinModelPortal:Q8IQ13 SMR:Q8IQ13 MINT:MINT-283849 PRIDE:Q8IQ13
EnsemblMetazoa:FBtr0077514 GeneID:319046 KEGG:dme:Dmel_CG31957
UCSC:CG31957-RA FlyBase:FBgn0051957 InParanoid:Q8IQ13
OrthoDB:EOG45X6CM PhylomeDB:Q8IQ13 ChiTaRS:CG31957
GenomeRNAi:319046 NextBio:847066 Bgee:Q8IQ13 Uniprot:Q8IQ13
Length = 159
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 42/90 (46%), Positives = 66/90 (73%)
Query: 5 TKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRNNIWI 64
++RKH+ KE++ +Y +P + I ++ + GNNLH++E E + VSMP KFR ++W+
Sbjct: 9 SRRKHLMKEMMEDDYALPTETQQIARVISSRGNNLHEVETVD-ETFLVSMPNKFRKSMWV 67
Query: 65 KPGDFVIVKPIEEGNKVKAEIEQILDKKYI 94
K GDF++V+PIEEG+KVKAEI +IL ++I
Sbjct: 68 KRGDFLLVEPIEEGDKVKAEICKILTPEHI 97
>WB|WBGene00014112 [details] [associations]
symbol:ZK856.11 species:6239 "Caenorhabditis elegans"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001253 InterPro:IPR006196 Pfam:PF01176
PROSITE:PS50832 SMART:SM00652 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0000003
GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:Z70783 eggNOG:NOG316136 GeneTree:ENSGT00390000011180
HOGENOM:HOG000007486 KO:K15025 OMA:AEPQLSG PIR:T28050
RefSeq:NP_505624.1 ProteinModelPortal:Q23646 SMR:Q23646
DIP:DIP-27289N IntAct:Q23646 MINT:MINT-1052817 STRING:Q23646
PaxDb:Q23646 EnsemblMetazoa:ZK856.11 GeneID:179417
KEGG:cel:CELE_ZK856.11 UCSC:ZK856.11 CTD:179417 WormBase:ZK856.11
InParanoid:Q23646 NextBio:905298 Uniprot:Q23646
Length = 175
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 54/148 (36%), Positives = 89/148 (60%)
Query: 1 MSKATKRKHVQKELLSQEYR-VPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFR 59
MS ATK++++ ++ S+ Y V ED+ I ++ Q+ GNNLH++ + +G+ Y VSMP KFR
Sbjct: 1 MSAATKKRYITNKVGSEFYELVDEDI--IAQVRQSRGNNLHEVLDQNGDSYVVSMPTKFR 58
Query: 60 NNIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPI--ENGDIVHHFQE 117
++W++ FV+V+PI EG+KVK EIE ILD+ + ++++ K P EN + +
Sbjct: 59 KSVWLRRDQFVVVRPITEGDKVKGEIEYILDQDNVLYIRELGKWPTCFEENALKMTREAK 118
Query: 118 IGEQQAKPYRDLTLHLLNKEEGNKVKAE 145
G+ K D L EE ++ + E
Sbjct: 119 RGQTSDKMIDDDMLPPSESEEEDESEGE 146
>DICTYBASE|DDB_G0292138 [details] [associations]
symbol:DDB_G0292138 "Probable RNA-binding protein
EIF1AD" species:44689 "Dictyostelium discoideum" [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
dictyBase:DDB_G0292138 EMBL:AAFI02000187 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
eggNOG:NOG316136 KO:K15025 RefSeq:XP_629853.1
ProteinModelPortal:Q54DL9 EnsemblProtists:DDB0184249 GeneID:8628534
KEGG:ddi:DDB_G0292138 InParanoid:Q54DL9 OMA:GESIMQV
ProtClustDB:CLSZ2429487 Uniprot:Q54DL9
Length = 183
Score = 150 (57.9 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/188 (26%), Positives = 86/188 (45%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRN 60
MS A RKHV + L+ ++ D NIVK+ G N+ +++ +G +P KF+N
Sbjct: 1 MSHA--RKHVTNQSLNSSLKLEND-QNIVKVIDMRGGNVVEVQYPNGSTVLAIIPSKFKN 57
Query: 61 NIWIKPGDFVIVKPIEEGNK---VKAEIEQILDKKYISFLKQQLKLPPIENGDIVHHFQE 117
+WIK G++ I+ +E +K VK + IL K+ + L + P + D+ Q
Sbjct: 58 ILWIKKGNYAIIDKEDESSKSSQVKCSVVHILSKENVKGLVKSRDWP--KEFDLEDKNQR 115
Query: 118 IGEQQAKPYRDLTLHLLNKEEGNKVKAEIEQILDKKYISFLKQQNSWPFTEDSAEDKAKS 177
+Q KP LT + E+G + KK+ + E+ E++ +
Sbjct: 116 --QQPQKPLL-LTAPTSDDEDGGLSDLGVNPNR-KKFGRVDSDEEDLSDEEEEEEEEEEE 171
Query: 178 NCEDSDDE 185
E+ ++E
Sbjct: 172 EEEEEEEE 179
>UNIPROTKB|E9PNH5 [details] [associations]
symbol:EIF1AD "Probable RNA-binding protein EIF1AD"
species:9606 "Homo sapiens" [GO:0003743 "translation initiation
factor activity" evidence=IEA] InterPro:IPR006196 Pfam:PF01176
PROSITE:PS50832 GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AP006287 HGNC:HGNC:28147 IPI:IPI00980002
ProteinModelPortal:E9PNH5 SMR:E9PNH5 Ensembl:ENST00000525767
ArrayExpress:E9PNH5 Bgee:E9PNH5 Uniprot:E9PNH5
Length = 113
Score = 148 (57.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 54 MPGKFRNNIWIKPGDFVIVKPIEEGNKVKAEIEQILDKKYISFLKQQ 100
MP K+R NIWIK GDF+IV PIEEG KVKAEI +L K ++ L+++
Sbjct: 1 MPSKYRKNIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKE 47
>UNIPROTKB|E9PQD0 [details] [associations]
symbol:EIF1AD "Probable RNA-binding protein EIF1AD"
species:9606 "Homo sapiens" [GO:0003743 "translation initiation
factor activity" evidence=IEA] InterPro:IPR006196 Pfam:PF01176
GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AP006287 HGNC:HGNC:28147 IPI:IPI00984067
ProteinModelPortal:E9PQD0 SMR:E9PQD0 Ensembl:ENST00000529973
ArrayExpress:E9PQD0 Bgee:E9PQD0 Uniprot:E9PQD0
Length = 64
Score = 132 (51.5 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 1 MSKATKRKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKY 50
MS+ATKRKHV KE+L E+ VP D IV++ + GNNLH++E G+++
Sbjct: 1 MSQATKRKHVVKEVLG-EHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRF 49
>ASPGD|ASPL0000052694 [details] [associations]
symbol:AN0105 species:162425 "Emericella nidulans"
[GO:0006413 "translational initiation" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 EMBL:BN001308
GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AACD01000004 eggNOG:NOG316136 KO:K15025 HOGENOM:HOG000176180
OMA:RFRNTIW OrthoDB:EOG4ZPJ4R RefSeq:XP_657709.1
ProteinModelPortal:Q5BH75 EnsemblFungi:CADANIAT00002644
GeneID:2875884 KEGG:ani:AN0105.2 Uniprot:Q5BH75
Length = 135
Score = 117 (46.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 22 PEDL---NNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRNNIWIKPGDFVIV--KPIE 76
P++L I ++ + +GNN++ ++ S + V +P KFR+ IW+K G FV+V +E
Sbjct: 19 PDELAQGQEIARVIKATGNNIYSVQFPSKKTALVELPAKFRSTIWMKRGSFVVVDTNALE 78
Query: 77 -EGNKVKAEIEQIL-DKK 92
NK++ EI I+ D+K
Sbjct: 79 TRDNKLEGEIVNIVRDEK 96
>POMBASE|SPBC146.08c [details] [associations]
symbol:SPBC146.08c "translation initiation factor
eIF1A-like (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002183 "cytoplasmic translational initiation" evidence=NAS]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001253 InterPro:IPR006196 Pfam:PF01176
PROSITE:PS01262 PROSITE:PS50832 SMART:SM00652 PomBase:SPBC146.08c
GO:GO:0005829 GO:GO:0005634 EMBL:CU329671 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0002183
eggNOG:NOG316136 KO:K15025 PIR:T39422 RefSeq:NP_595397.1
ProteinModelPortal:Q9Y803 EnsemblFungi:SPBC146.08c.1 GeneID:2539677
KEGG:spo:SPBC146.08c HOGENOM:HOG000176180 OMA:RFRNTIW
OrthoDB:EOG4ZPJ4R NextBio:20800831 Uniprot:Q9Y803
Length = 127
Score = 113 (44.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 28 IVKITQNSGNNLHQIENHSGEKYFVSMPGKFRNNIWIKPGDFVIVKP---IEEGNKVKAE 84
+ K+ Q G+ L + ++G++ V MP K+RN IW++ FVIV +E+ NK+
Sbjct: 23 VAKVVQLKGSALFMVVENNGQELLVEMPPKYRNKIWVRRNGFVIVDKSEFLEKDNKIDGT 82
Query: 85 IEQILDKKYISFLKQ 99
I ++ ++ KQ
Sbjct: 83 ILYVVQSPLKNWKKQ 97
>TAIR|locus:2064864 [details] [associations]
symbol:AT2G40780 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
InterPro:IPR001253 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
SMART:SM00652 EMBL:CP002685 GO:GO:0003743 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 UniGene:At.53090 KO:K15025
OMA:GESIMQV IPI:IPI00524954 RefSeq:NP_181610.1
ProteinModelPortal:F4II37 SMR:F4II37 PRIDE:F4II37
EnsemblPlants:AT2G40780.1 GeneID:818675 KEGG:ath:AT2G40780
Uniprot:F4II37
Length = 171
Score = 114 (45.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/106 (25%), Positives = 57/106 (53%)
Query: 7 RKHVQKELLSQEYRVPEDLNNIVKITQNSGNNLHQIENHSGEKYFVSMPGKFRNNIWIKP 66
R+++++ Q++ + E+ +I ++ G+N +I + GE P KFR ++WI+
Sbjct: 5 RRNLKQAASDQDFTL-EECQSIAQVVSLRGSNQIEIMDAKGENSLALFPAKFRESMWIRR 63
Query: 67 GDFVIV------KPIEEGNKVKAEIEQILDKKYISFLKQQLKLPPI 106
G FV++ K E G+KV + + ++L + + L++ + P I
Sbjct: 64 GSFVVIDHTGKEKAQESGSKVTSIVCKVLFFEQVRLLQKSPEWPEI 109
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 275 275 0.00079 115 3 11 22 0.39 34
33 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 607 (65 KB)
Total size of DFA: 213 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 29.38u 0.08s 29.46t Elapsed: 00:00:14
Total cpu time: 29.38u 0.08s 29.46t Elapsed: 00:00:16
Start: Thu Aug 15 14:23:37 2013 End: Thu Aug 15 14:23:53 2013