Query psy10598
Match_columns 119
No_of_seqs 188 out of 1042
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 22:27:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10598.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10598hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00201 UDPGT: UDP-glucoronos 99.9 9.5E-29 2.1E-33 194.0 5.6 106 8-119 308-415 (500)
2 PHA03392 egt ecdysteroid UDP-g 99.9 2E-27 4.3E-32 188.1 8.7 106 8-119 330-438 (507)
3 PLN02670 transferase, transfer 99.9 1.3E-24 2.9E-29 170.7 8.3 105 8-118 309-437 (472)
4 PLN03004 UDP-glycosyltransfera 99.9 2E-24 4.2E-29 169.0 8.0 93 21-119 334-430 (451)
5 PLN02554 UDP-glycosyltransfera 99.9 1.2E-24 2.6E-29 171.4 5.8 94 20-119 341-447 (481)
6 PLN02562 UDP-glycosyltransfera 99.9 4.2E-24 9.1E-29 167.1 8.4 93 19-119 326-419 (448)
7 PLN02208 glycosyltransferase f 99.9 5.3E-24 1.1E-28 166.3 8.6 89 21-115 311-403 (442)
8 COG1819 Glycosyl transferases, 99.9 9.2E-24 2E-28 163.5 8.0 96 15-118 278-373 (406)
9 PLN02207 UDP-glycosyltransfera 99.9 1.7E-23 3.7E-28 164.3 7.8 95 19-119 330-434 (468)
10 PLN02410 UDP-glucoronosyl/UDP- 99.9 3.3E-23 7.2E-28 162.2 8.4 89 19-114 322-411 (451)
11 KOG1192|consensus 99.9 6.6E-23 1.4E-27 160.5 8.0 107 6-118 310-427 (496)
12 PLN02167 UDP-glycosyltransfera 99.9 3.6E-23 7.9E-28 162.8 6.4 90 23-118 342-440 (475)
13 PLN02210 UDP-glucosyl transfer 99.9 1.3E-22 2.8E-27 159.1 8.3 90 20-115 323-417 (456)
14 PLN02992 coniferyl-alcohol glu 99.9 2.4E-22 5.2E-27 158.3 9.8 87 22-114 339-428 (481)
15 PLN02152 indole-3-acetate beta 99.9 1.3E-22 2.7E-27 159.0 7.4 91 19-115 325-419 (455)
16 PLN02173 UDP-glucosyl transfer 99.9 1.9E-22 4.2E-27 157.7 8.3 90 20-115 316-410 (449)
17 PLN03007 UDP-glucosyltransfera 99.9 2.6E-22 5.5E-27 158.2 7.8 93 20-118 344-448 (482)
18 PLN00164 glucosyltransferase; 99.9 4.4E-22 9.6E-27 156.8 9.0 88 23-116 341-434 (480)
19 PLN02448 UDP-glycosyltransfera 99.9 3.5E-22 7.5E-27 156.7 8.0 102 7-114 304-416 (459)
20 PLN02555 limonoid glucosyltran 99.9 6.3E-22 1.4E-26 155.9 8.6 89 20-114 336-430 (480)
21 PLN02764 glycosyltransferase f 99.9 3.3E-22 7.2E-27 156.4 7.0 87 22-114 318-408 (453)
22 PLN00414 glycosyltransferase f 99.9 3.6E-22 7.9E-27 156.1 6.5 86 23-114 314-403 (446)
23 PLN02863 UDP-glucoronosyl/UDP- 99.9 5E-22 1.1E-26 156.4 7.3 91 22-118 344-439 (477)
24 PLN03015 UDP-glucosyl transfer 99.8 1.9E-21 4.2E-26 152.7 7.6 84 23-112 337-425 (470)
25 cd03784 GT1_Gtf_like This fami 99.8 1.3E-21 2.7E-26 149.6 6.0 92 18-117 285-376 (401)
26 TIGR01426 MGT glycosyltransfer 99.8 9.7E-21 2.1E-25 144.8 8.0 94 17-118 271-364 (392)
27 PLN02534 UDP-glycosyltransfera 99.8 1.2E-19 2.6E-24 143.3 7.4 87 20-112 343-443 (491)
28 PF04101 Glyco_tran_28_C: Glyc 99.7 7.1E-19 1.5E-23 120.7 1.9 90 20-116 54-147 (167)
29 TIGR00661 MJ1255 conserved hyp 99.7 3.1E-16 6.8E-21 117.6 8.9 91 17-117 225-318 (321)
30 PF13528 Glyco_trans_1_3: Glyc 99.7 4.4E-16 9.4E-21 115.7 8.5 86 18-110 229-317 (318)
31 PRK12446 undecaprenyldiphospho 99.6 1.9E-15 4E-20 115.2 6.8 87 22-115 235-327 (352)
32 COG0707 MurG UDP-N-acetylgluco 99.6 4.3E-15 9.3E-20 113.6 7.5 85 23-114 237-325 (357)
33 PRK00726 murG undecaprenyldiph 99.4 5.3E-13 1.2E-17 100.7 7.2 89 22-117 236-328 (357)
34 cd03785 GT1_MurG MurG is an N- 99.3 1.4E-11 3E-16 92.3 7.0 91 20-117 234-328 (350)
35 COG4671 Predicted glycosyl tra 99.2 2E-11 4.3E-16 92.5 6.8 89 21-116 277-368 (400)
36 PRK13608 diacylglycerol glucos 99.2 2.1E-11 4.5E-16 93.9 6.6 86 20-116 255-341 (391)
37 PRK13609 diacylglycerol glucos 99.1 1.2E-10 2.6E-15 88.7 6.9 88 19-117 254-342 (380)
38 PLN02605 monogalactosyldiacylg 99.1 1.8E-10 3.9E-15 88.2 6.1 85 20-115 264-350 (382)
39 TIGR01133 murG undecaprenyldip 99.1 2.4E-10 5.2E-15 85.5 6.5 76 40-117 247-325 (348)
40 KOG3349|consensus 98.9 1.8E-09 3.9E-14 73.2 5.0 66 23-95 65-134 (170)
41 TIGR03590 PseG pseudaminic aci 98.9 6.3E-10 1.4E-14 82.5 3.0 57 20-84 223-279 (279)
42 TIGR03492 conserved hypothetic 98.8 5.9E-09 1.3E-13 80.8 6.0 84 22-116 280-367 (396)
43 TIGR00215 lpxB lipid-A-disacch 98.5 3.3E-08 7.2E-13 76.2 1.8 72 40-114 264-348 (385)
44 PRK00025 lpxB lipid-A-disaccha 98.3 4.3E-07 9.4E-12 69.0 2.6 76 40-118 258-346 (380)
45 COG5017 Uncharacterized conser 98.3 5.2E-06 1.1E-10 55.8 7.2 66 23-95 48-123 (161)
46 COG3980 spsG Spore coat polysa 98.3 1.4E-06 3.1E-11 64.8 4.9 90 20-118 209-298 (318)
47 cd03814 GT1_like_2 This family 98.1 4.8E-06 1E-10 61.2 5.6 89 18-117 244-336 (364)
48 PRK05749 3-deoxy-D-manno-octul 98.1 5.4E-06 1.2E-10 64.2 5.8 85 22-117 303-392 (425)
49 PF00534 Glycos_transf_1: Glyc 98.0 4E-06 8.7E-11 56.7 2.7 87 18-117 70-162 (172)
50 cd05844 GT1_like_7 Glycosyltra 98.0 1E-05 2.2E-10 60.5 4.5 86 19-115 243-338 (367)
51 cd03801 GT1_YqgM_like This fam 97.9 1.3E-05 2.9E-10 58.1 4.6 88 18-116 253-344 (374)
52 cd03795 GT1_like_4 This family 97.9 2.2E-05 4.8E-10 58.1 5.5 90 18-117 241-336 (357)
53 cd03786 GT1_UDP-GlcNAc_2-Epime 97.9 3.2E-05 7E-10 58.2 6.2 85 20-117 257-341 (363)
54 TIGR00236 wecB UDP-N-acetylglu 97.9 2.6E-05 5.7E-10 59.2 5.8 86 19-117 253-338 (365)
55 cd03823 GT1_ExpE7_like This fa 97.9 3.4E-05 7.3E-10 56.5 5.8 87 19-116 241-332 (359)
56 cd03808 GT1_cap1E_like This fa 97.9 3.9E-05 8.4E-10 55.8 5.9 85 19-116 244-332 (359)
57 cd03800 GT1_Sucrose_synthase T 97.8 3.1E-05 6.8E-10 58.3 5.3 87 19-116 281-371 (398)
58 cd03820 GT1_amsD_like This fam 97.8 3.9E-05 8.4E-10 55.5 5.4 86 19-117 233-323 (348)
59 cd03812 GT1_CapH_like This fam 97.8 4.2E-05 9.1E-10 56.8 5.6 87 18-118 246-336 (358)
60 cd03798 GT1_wlbH_like This fam 97.7 0.00014 3.1E-09 52.9 6.7 87 18-115 256-346 (377)
61 cd03794 GT1_wbuB_like This fam 97.7 5.9E-05 1.3E-09 55.4 4.6 87 20-117 274-369 (394)
62 COG1519 KdtA 3-deoxy-D-manno-o 97.7 0.00011 2.3E-09 57.5 6.0 88 18-117 297-390 (419)
63 PRK15427 colanic acid biosynth 97.7 8.3E-05 1.8E-09 57.7 5.5 88 18-116 276-374 (406)
64 cd04962 GT1_like_5 This family 97.7 7.2E-05 1.5E-09 56.0 4.8 85 19-116 251-339 (371)
65 PRK09922 UDP-D-galactose:(gluc 97.7 0.00016 3.4E-09 54.8 6.6 89 18-116 233-327 (359)
66 cd03817 GT1_UGDG_like This fam 97.7 5.3E-05 1.2E-09 55.6 3.8 87 18-116 256-346 (374)
67 cd03821 GT1_Bme6_like This fam 97.6 6E-05 1.3E-09 55.2 3.8 85 18-115 259-347 (375)
68 cd03807 GT1_WbnK_like This fam 97.6 0.00011 2.4E-09 53.6 5.0 83 18-115 248-334 (365)
69 cd04946 GT1_AmsK_like This fam 97.6 0.00011 2.4E-09 56.9 4.9 90 20-117 288-381 (407)
70 TIGR03087 stp1 sugar transfera 97.6 9.6E-05 2.1E-09 56.7 4.5 82 20-116 279-365 (397)
71 cd03799 GT1_amsK_like This is 97.6 9.9E-05 2.1E-09 54.5 4.3 86 19-115 234-329 (355)
72 cd03804 GT1_wbaZ_like This fam 97.5 0.00011 2.4E-09 55.1 4.1 86 18-114 239-327 (351)
73 PRK15484 lipopolysaccharide 1, 97.5 0.0002 4.3E-09 55.0 5.6 89 18-116 254-347 (380)
74 TIGR03088 stp2 sugar transfera 97.5 0.0002 4.4E-09 54.1 5.5 84 19-115 253-340 (374)
75 TIGR03449 mycothiol_MshA UDP-N 97.5 0.00014 3.1E-09 55.5 4.7 88 18-116 280-371 (405)
76 cd03811 GT1_WabH_like This fam 97.5 0.00024 5.3E-09 51.3 5.4 85 18-115 243-334 (353)
77 cd04951 GT1_WbdM_like This fam 97.5 8.9E-05 1.9E-09 54.9 3.0 80 18-112 242-325 (360)
78 cd03825 GT1_wcfI_like This fam 97.5 0.00012 2.6E-09 54.3 3.5 87 19-115 242-332 (365)
79 cd03818 GT1_ExpC_like This fam 97.4 0.00011 2.4E-09 56.3 3.1 86 20-116 280-369 (396)
80 cd03822 GT1_ecORF704_like This 97.4 0.00024 5.3E-09 52.3 4.7 85 19-115 245-336 (366)
81 cd03805 GT1_ALG2_like This fam 97.4 0.00021 4.5E-09 54.1 4.3 87 18-116 277-367 (392)
82 cd03819 GT1_WavL_like This fam 97.4 0.00035 7.5E-09 51.8 5.2 82 18-112 243-329 (355)
83 cd04949 GT1_gtfA_like This fam 97.4 0.00033 7.2E-09 52.8 5.1 86 18-115 258-347 (372)
84 PRK14089 ipid-A-disaccharide s 97.3 0.00011 2.4E-09 56.4 2.0 67 40-109 232-315 (347)
85 TIGR02472 sucr_P_syn_N sucrose 97.3 0.0002 4.3E-09 56.0 3.3 87 19-116 315-409 (439)
86 PLN02871 UDP-sulfoquinovose:DA 97.3 0.00036 7.7E-09 54.9 4.1 86 21-117 312-404 (465)
87 PF13692 Glyco_trans_1_4: Glyc 97.2 0.00019 4.2E-09 46.6 2.1 79 20-113 52-135 (135)
88 cd03813 GT1_like_3 This family 97.2 0.00038 8.2E-09 55.0 4.1 85 19-117 352-446 (475)
89 PLN02275 transferase, transfer 97.1 0.0018 3.9E-08 49.5 6.3 78 21-111 286-371 (371)
90 PRK15179 Vi polysaccharide bio 97.1 0.0017 3.6E-08 54.1 6.4 84 18-112 571-658 (694)
91 cd03816 GT1_ALG1_like This fam 97.1 0.00084 1.8E-08 52.2 4.3 80 21-113 294-381 (415)
92 cd03809 GT1_mtfB_like This fam 96.9 0.00021 4.6E-09 52.6 -0.3 87 18-117 250-340 (365)
93 TIGR02149 glgA_Coryne glycogen 96.7 0.0036 7.7E-08 47.3 5.2 71 40-116 277-355 (388)
94 PRK10307 putative glycosyl tra 96.7 0.0039 8.5E-08 47.9 5.3 85 21-116 284-376 (412)
95 cd03802 GT1_AviGT4_like This f 96.7 0.0027 5.8E-08 46.6 4.1 81 19-112 222-307 (335)
96 cd03792 GT1_Trehalose_phosphor 96.6 0.0017 3.7E-08 49.2 3.0 85 19-116 250-340 (372)
97 cd03796 GT1_PIG-A_like This fa 96.3 0.013 2.8E-07 45.0 6.2 83 19-114 248-334 (398)
98 PRK09814 beta-1,6-galactofuran 96.3 0.0086 1.9E-07 45.2 5.1 79 18-110 204-297 (333)
99 PF13844 Glyco_transf_41: Glyc 96.3 0.0016 3.4E-08 51.9 0.9 70 20-94 341-414 (468)
100 cd04955 GT1_like_6 This family 96.2 0.0038 8.2E-08 46.3 2.7 83 18-115 245-332 (363)
101 TIGR02918 accessory Sec system 96.1 0.0067 1.5E-07 48.7 3.5 85 19-114 374-468 (500)
102 cd01635 Glycosyltransferase_GT 95.9 0.0079 1.7E-07 41.2 2.8 54 18-75 158-215 (229)
103 TIGR02468 sucrsPsyn_pln sucros 95.8 0.0063 1.4E-07 52.7 2.6 88 19-117 546-641 (1050)
104 PRK15490 Vi polysaccharide bio 95.6 0.021 4.6E-07 46.6 4.6 67 19-96 453-523 (578)
105 PF13524 Glyco_trans_1_2: Glyc 95.6 0.033 7.2E-07 33.9 4.6 59 52-118 9-67 (92)
106 TIGR03713 acc_sec_asp1 accesso 95.6 0.0094 2E-07 48.1 2.5 76 21-114 409-489 (519)
107 cd04950 GT1_like_1 Glycosyltra 95.5 0.045 9.7E-07 41.8 6.1 79 21-114 254-341 (373)
108 cd03806 GT1_ALG11_like This fa 95.4 0.02 4.3E-07 44.7 4.0 86 18-115 302-394 (419)
109 PF04007 DUF354: Protein of un 95.2 0.083 1.8E-06 40.5 6.5 65 40-112 245-309 (335)
110 TIGR02095 glgA glycogen/starch 95.2 0.017 3.6E-07 45.5 2.8 83 19-112 344-436 (473)
111 PLN02501 digalactosyldiacylgly 94.8 0.046 1E-06 45.9 4.5 78 22-115 602-683 (794)
112 PHA01633 putative glycosyl tra 94.7 0.076 1.7E-06 40.7 5.2 89 18-113 198-307 (335)
113 PLN02949 transferase, transfer 94.5 0.019 4.1E-07 45.7 1.6 84 18-113 332-422 (463)
114 PLN02846 digalactosyldiacylgly 94.3 0.08 1.7E-06 42.3 4.6 64 40-114 297-364 (462)
115 PRK14098 glycogen synthase; Pr 93.9 0.087 1.9E-06 42.2 4.1 84 19-111 360-449 (489)
116 PLN00142 sucrose synthase 93.8 0.1 2.2E-06 44.4 4.4 66 45-116 666-739 (815)
117 COG0381 WecB UDP-N-acetylgluco 92.8 0.079 1.7E-06 41.3 2.2 80 22-117 263-345 (383)
118 TIGR02470 sucr_synth sucrose s 92.7 0.14 2.9E-06 43.5 3.6 84 19-111 617-707 (784)
119 PHA01630 putative group 1 glyc 92.6 0.1 2.2E-06 39.7 2.6 67 44-113 208-294 (331)
120 PF02350 Epimerase_2: UDP-N-ac 92.6 0.14 3E-06 39.3 3.2 77 21-113 239-318 (346)
121 PRK01021 lpxB lipid-A-disaccha 92.5 0.24 5.2E-06 40.9 4.7 74 40-117 485-575 (608)
122 cd03791 GT1_Glycogen_synthase_ 92.5 0.13 2.7E-06 40.4 3.1 86 20-112 350-441 (476)
123 PF02684 LpxB: Lipid-A-disacch 92.5 0.25 5.5E-06 38.4 4.6 74 40-116 257-343 (373)
124 TIGR03568 NeuC_NnaA UDP-N-acet 92.3 0.15 3.2E-06 39.3 3.1 77 20-112 261-338 (365)
125 PRK10125 putative glycosyl tra 92.1 0.68 1.5E-05 36.1 6.7 77 20-107 285-365 (405)
126 PRK00654 glgA glycogen synthas 92.0 0.11 2.4E-06 41.0 2.2 69 40-112 353-427 (466)
127 PLN02939 transferase, transfer 91.3 0.29 6.4E-06 42.4 4.1 87 19-112 835-930 (977)
128 PRK10017 colanic acid biosynth 91.1 0.86 1.9E-05 36.1 6.3 69 40-114 324-393 (426)
129 COG0438 RfaG Glycosyltransfera 90.3 0.75 1.6E-05 32.5 5.0 84 20-114 256-343 (381)
130 PRK14099 glycogen synthase; Pr 90.1 0.28 6.1E-06 39.2 2.8 70 44-115 368-449 (485)
131 TIGR02400 trehalose_OtsA alpha 89.8 1.2 2.5E-05 35.5 6.1 62 44-114 354-423 (456)
132 PRK04885 ppnK inorganic polyph 89.7 1.2 2.5E-05 33.2 5.7 29 44-72 34-68 (265)
133 TIGR02919 accessory Sec system 89.5 0.33 7.1E-06 38.6 2.8 80 21-115 328-413 (438)
134 PLN02316 synthase/transferase 88.8 0.84 1.8E-05 40.0 4.9 85 19-113 898-998 (1036)
135 PRK02649 ppnK inorganic polyph 88.2 1.8 3.8E-05 32.9 5.8 54 44-113 67-124 (305)
136 cd03793 GT1_Glycogen_synthase_ 87.9 1.6 3.6E-05 36.0 5.8 69 44-113 473-552 (590)
137 PRK14077 pnk inorganic polypho 87.1 2.4 5.2E-05 31.9 5.9 54 44-113 63-120 (287)
138 PRK02155 ppnK NAD(+)/NADH kina 86.9 2.6 5.6E-05 31.7 6.1 29 44-72 62-94 (291)
139 PRK03372 ppnK inorganic polyph 85.7 2.6 5.7E-05 32.0 5.6 54 44-113 71-128 (306)
140 PF05159 Capsule_synth: Capsul 85.7 0.67 1.5E-05 33.9 2.3 41 22-71 184-224 (269)
141 COG3660 Predicted nucleoside-d 85.7 3.1 6.7E-05 31.4 5.7 76 28-111 235-326 (329)
142 PRK01911 ppnK inorganic polyph 85.5 2.9 6.4E-05 31.5 5.7 54 44-113 63-120 (292)
143 PRK02231 ppnK inorganic polyph 85.4 3.1 6.8E-05 31.0 5.8 53 44-112 41-97 (272)
144 PRK04539 ppnK inorganic polyph 84.7 5.3 0.00011 30.2 6.8 54 44-113 67-124 (296)
145 PRK03501 ppnK inorganic polyph 83.8 4.2 9.2E-05 30.2 5.8 55 44-113 38-97 (264)
146 PRK01185 ppnK inorganic polyph 83.8 3.7 8E-05 30.6 5.5 53 45-113 52-105 (271)
147 PRK03708 ppnK inorganic polyph 83.1 3.2 6.8E-05 31.0 5.0 29 45-73 57-88 (277)
148 PRK03378 ppnK inorganic polyph 82.6 4.2 9E-05 30.6 5.5 54 44-113 62-119 (292)
149 PRK14075 pnk inorganic polypho 82.3 5.4 0.00012 29.4 5.9 54 44-113 40-94 (256)
150 COG4370 Uncharacterized protei 82.2 5.1 0.00011 31.0 5.7 83 25-116 281-382 (412)
151 PRK01231 ppnK inorganic polyph 81.3 6.2 0.00013 29.7 6.0 54 44-113 61-118 (295)
152 PLN02929 NADH kinase 81.2 4.8 0.0001 30.6 5.3 66 44-113 63-137 (301)
153 cd03788 GT1_TPS Trehalose-6-Ph 79.5 1.8 3.9E-05 34.4 2.7 64 40-114 357-428 (460)
154 PRK14076 pnk inorganic polypho 79.4 6.1 0.00013 32.5 5.8 53 45-113 348-404 (569)
155 KOG0853|consensus 79.3 0.34 7.4E-06 39.1 -1.4 58 56-117 380-437 (495)
156 KOG4626|consensus 77.8 1.8 3.8E-05 36.4 2.2 74 20-95 815-889 (966)
157 PLN02935 Bifunctional NADH kin 77.7 7.8 0.00017 31.6 5.8 54 44-113 261-318 (508)
158 PF06506 PrpR_N: Propionate ca 76.3 1.6 3.5E-05 30.0 1.5 32 43-75 32-63 (176)
159 PF06258 Mito_fiss_Elm1: Mitoc 75.8 3.7 8E-05 31.2 3.4 54 40-95 225-282 (311)
160 PF07429 Glyco_transf_56: 4-al 74.9 12 0.00027 29.1 6.0 83 21-112 245-332 (360)
161 COG3914 Spy Predicted O-linked 74.9 4.8 0.0001 33.3 3.9 67 21-94 489-561 (620)
162 PF09547 Spore_IV_A: Stage IV 73.6 31 0.00066 28.0 8.0 74 41-114 142-236 (492)
163 PF04464 Glyphos_transf: CDP-G 70.5 1 2.2E-05 34.3 -0.8 83 19-114 250-337 (369)
164 PLN02727 NAD kinase 70.0 16 0.00034 32.1 6.0 53 44-112 742-798 (986)
165 PF11071 DUF2872: Protein of u 69.9 12 0.00026 25.2 4.3 63 40-111 69-140 (141)
166 PLN03063 alpha,alpha-trehalose 66.4 7.8 0.00017 33.2 3.6 63 40-112 372-442 (797)
167 PRK04761 ppnK inorganic polyph 65.6 9.2 0.0002 28.2 3.5 30 44-73 24-57 (246)
168 PRK02797 4-alpha-L-fucosyltran 65.0 24 0.00051 27.2 5.6 66 40-111 223-292 (322)
169 COG1817 Uncharacterized protei 64.0 27 0.00058 27.0 5.7 66 40-114 249-315 (346)
170 COG0763 LpxB Lipid A disacchar 63.7 7.6 0.00017 30.5 2.8 70 44-114 263-345 (381)
171 PRK02645 ppnK inorganic polyph 60.4 13 0.00029 28.0 3.6 30 44-73 56-89 (305)
172 TIGR00421 ubiX_pad polyprenyl 60.2 55 0.0012 22.8 6.6 33 61-93 108-144 (181)
173 TIGR02113 coaC_strep phosphopa 60.0 53 0.0012 22.8 6.3 45 65-109 112-175 (177)
174 PF03641 Lysine_decarbox: Poss 57.1 15 0.00033 24.1 3.1 45 44-88 52-110 (133)
175 KOG4180|consensus 56.4 6 0.00013 30.6 1.1 28 44-71 104-135 (395)
176 TIGR02193 heptsyl_trn_I lipopo 55.8 22 0.00048 26.3 4.1 65 40-111 251-319 (319)
177 TIGR00730 conserved hypothetic 53.1 20 0.00043 25.0 3.2 45 44-88 95-152 (178)
178 COG2327 WcaK Polysaccharide py 53.0 80 0.0017 25.0 6.8 68 40-113 282-350 (385)
179 TIGR00725 conserved hypothetic 52.2 14 0.0003 25.2 2.3 31 44-74 90-124 (159)
180 PRK14116 gpmA phosphoglyceromu 52.1 11 0.00024 26.9 2.0 23 45-67 175-197 (228)
181 TIGR03646 YtoQ_fam YtoQ family 51.8 20 0.00043 24.1 2.9 30 40-71 72-109 (144)
182 PRK06270 homoserine dehydrogen 51.7 58 0.0013 24.9 5.9 74 40-113 84-169 (341)
183 TIGR00732 dprA DNA protecting 51.1 47 0.001 23.9 5.0 46 55-105 171-218 (220)
184 PRK15424 propionate catabolism 50.9 63 0.0014 26.6 6.2 43 43-86 62-105 (538)
185 TIGR02398 gluc_glyc_Psyn gluco 50.4 17 0.00037 29.5 2.9 78 23-114 364-449 (487)
186 PRK14119 gpmA phosphoglyceromu 49.7 15 0.00032 26.3 2.2 23 45-67 175-197 (228)
187 COG0061 nadF NAD kinase [Coenz 49.4 68 0.0015 23.9 5.8 53 44-112 54-110 (281)
188 TIGR03848 MSMEG_4193 probable 49.1 20 0.00043 24.9 2.8 23 46-68 146-168 (204)
189 PRK13463 phosphatase PhoE; Pro 49.1 15 0.00033 25.6 2.2 24 45-68 144-167 (203)
190 PRK00561 ppnK inorganic polyph 48.8 26 0.00057 26.0 3.5 30 44-73 32-65 (259)
191 PRK11475 DNA-binding transcrip 48.1 96 0.0021 21.9 7.9 52 64-116 67-118 (207)
192 PF00282 Pyridoxal_deC: Pyrido 47.7 1.2E+02 0.0026 23.5 7.1 68 45-113 103-191 (373)
193 TIGR02329 propionate_PrpR prop 47.5 84 0.0018 25.7 6.4 43 43-86 52-95 (526)
194 PLN02496 probable phosphopanto 47.3 1.1E+02 0.0023 22.1 6.7 50 64-113 131-199 (209)
195 TIGR00661 MJ1255 conserved hyp 47.1 26 0.00056 26.1 3.3 28 44-71 92-119 (321)
196 PF12689 Acid_PPase: Acid Phos 47.1 38 0.00083 23.4 3.9 47 64-110 120-166 (169)
197 PF01513 NAD_kinase: ATP-NAD k 47.0 26 0.00057 26.0 3.3 30 44-73 75-108 (285)
198 PRK05579 bifunctional phosphop 46.8 1.1E+02 0.0024 24.1 6.8 72 44-116 81-186 (399)
199 PRK14118 gpmA phosphoglyceromu 46.7 17 0.00036 26.1 2.1 23 46-68 175-197 (227)
200 PRK12446 undecaprenyldiphospho 46.3 27 0.00059 26.7 3.3 31 41-71 87-120 (352)
201 PRK13057 putative lipid kinase 46.2 28 0.0006 25.7 3.3 30 44-73 49-82 (287)
202 TIGR03162 ribazole_cobC alpha- 45.5 18 0.00039 24.3 2.1 23 45-67 138-160 (177)
203 TIGR02836 spore_IV_A stage IV 44.6 1.7E+02 0.0038 23.8 7.6 72 43-114 144-236 (492)
204 PRK14117 gpmA phosphoglyceromu 44.4 19 0.00041 25.8 2.1 23 45-67 175-197 (230)
205 smart00046 DAGKc Diacylglycero 43.1 31 0.00068 22.2 2.8 31 44-74 48-87 (124)
206 PTZ00122 phosphoglycerate muta 42.3 27 0.00059 26.3 2.8 23 46-68 234-256 (299)
207 PRK11914 diacylglycerol kinase 42.2 31 0.00067 25.7 3.0 30 44-73 63-96 (306)
208 PRK07313 phosphopantothenoylcy 42.2 1.2E+02 0.0025 21.1 6.1 48 65-112 113-179 (182)
209 PRK13059 putative lipid kinase 41.9 29 0.00064 25.8 2.9 30 44-73 55-90 (295)
210 cd07039 TPP_PYR_POX Pyrimidine 41.6 1.1E+02 0.0024 20.7 7.1 29 44-72 62-96 (164)
211 PRK15004 alpha-ribazole phosph 40.9 22 0.00048 24.6 2.0 24 45-68 142-165 (199)
212 TIGR02482 PFKA_ATP 6-phosphofr 40.6 45 0.00098 25.3 3.7 31 44-74 90-124 (301)
213 PRK03482 phosphoglycerate muta 40.5 26 0.00057 24.5 2.3 23 46-68 144-166 (215)
214 cd07037 TPP_PYR_MenD Pyrimidin 40.2 54 0.0012 22.4 3.8 30 44-73 59-94 (162)
215 PRK01112 phosphoglyceromutase; 40.0 24 0.00052 25.4 2.1 24 45-68 174-197 (228)
216 COG3199 Predicted inorganic po 39.4 1.3E+02 0.0028 23.5 6.0 30 44-73 99-131 (355)
217 cd07038 TPP_PYR_PDC_IPDC_like 39.4 1.2E+02 0.0026 20.4 5.7 27 46-72 60-92 (162)
218 PTZ00123 phosphoglycerate muta 38.8 26 0.00056 25.3 2.1 22 46-67 163-184 (236)
219 PRK05920 aromatic acid decarbo 38.7 58 0.0012 23.3 3.8 33 60-92 125-161 (204)
220 PRK01295 phosphoglyceromutase; 38.7 25 0.00054 24.7 2.0 24 45-68 151-174 (206)
221 cd07035 TPP_PYR_POX_like Pyrim 38.5 1.1E+02 0.0024 19.9 8.1 29 45-73 59-93 (155)
222 PRK13054 lipid kinase; Reviewe 37.8 49 0.0011 24.6 3.5 30 44-73 55-92 (300)
223 TIGR00147 lipid kinase, YegS/R 37.4 45 0.00098 24.5 3.3 30 44-73 56-91 (293)
224 cd08549 G1PDH_related Glycerol 36.6 50 0.0011 25.1 3.4 30 45-75 80-114 (332)
225 PF12146 Hydrolase_4: Putative 35.5 56 0.0012 19.4 2.9 46 22-93 3-48 (79)
226 cd08171 GlyDH-like2 Glycerol d 35.5 53 0.0011 25.0 3.4 30 44-74 77-111 (345)
227 cd07766 DHQ_Fe-ADH Dehydroquin 35.4 52 0.0011 24.7 3.4 30 44-74 77-113 (332)
228 PRK14501 putative bifunctional 35.1 11 0.00024 31.8 -0.3 63 44-114 360-429 (726)
229 TIGR01258 pgm_1 phosphoglycera 34.9 31 0.00068 25.1 2.0 23 45-67 174-196 (245)
230 PRK03202 6-phosphofructokinase 34.7 66 0.0014 24.6 3.8 31 44-74 92-125 (320)
231 PRK10100 DNA-binding transcrip 34.6 1.7E+02 0.0036 20.8 7.2 51 64-116 80-130 (216)
232 PF01372 Melittin: Melittin; 33.9 4 8.7E-05 19.2 -1.8 17 54-70 1-17 (26)
233 PF04230 PS_pyruv_trans: Polys 33.9 1.6E+02 0.0034 20.3 6.1 31 45-75 63-109 (286)
234 PF12496 BNIP2: Bcl2-/adenovir 33.6 19 0.0004 24.0 0.6 8 48-55 116-123 (127)
235 PRK13840 sucrose phosphorylase 33.3 52 0.0011 26.8 3.2 44 64-107 371-414 (495)
236 PF12894 Apc4_WD40: Anaphase-p 33.2 42 0.00091 18.0 1.9 17 17-33 8-24 (47)
237 PRK15118 universal stress glob 33.1 72 0.0016 20.4 3.4 30 45-74 103-140 (144)
238 PRK14115 gpmA phosphoglyceromu 33.0 38 0.00081 24.7 2.2 23 45-67 174-196 (247)
239 PF09139 Mmp37: Mitochondrial 33.0 41 0.00088 26.0 2.4 90 19-117 85-184 (330)
240 COG1618 Predicted nucleotide k 32.8 1.7E+02 0.0037 20.6 5.2 57 56-114 121-178 (179)
241 PRK13695 putative NTPase; Prov 32.5 1.6E+02 0.0034 19.7 5.6 56 56-111 117-172 (174)
242 cd03789 GT1_LPS_heptosyltransf 32.5 42 0.00091 24.3 2.4 29 40-71 195-223 (279)
243 COG0406 phoE Broad specificity 32.1 42 0.00091 23.2 2.3 23 46-68 147-169 (208)
244 PRK11761 cysM cysteine synthas 32.1 2.1E+02 0.0047 21.2 7.3 62 48-110 66-131 (296)
245 PF05693 Glycogen_syn: Glycoge 31.4 98 0.0021 26.1 4.5 66 44-111 468-541 (633)
246 PF02481 DNA_processg_A: DNA r 31.0 77 0.0017 22.6 3.5 39 54-93 170-210 (212)
247 PRK14120 gpmA phosphoglyceromu 30.8 40 0.00086 24.7 2.0 23 46-68 177-199 (249)
248 PRK13462 acid phosphatase; Pro 30.7 51 0.0011 23.1 2.5 22 46-67 141-162 (203)
249 TIGR02483 PFK_mixed phosphofru 30.6 82 0.0018 24.1 3.8 31 44-74 93-126 (324)
250 COG0496 SurE Predicted acid ph 30.3 94 0.002 23.1 3.9 24 51-74 103-126 (252)
251 PRK13337 putative lipid kinase 30.3 75 0.0016 23.6 3.5 30 44-73 56-91 (304)
252 KOG2986|consensus 30.2 24 0.00053 26.6 0.8 63 55-117 124-189 (313)
253 PRK13055 putative lipid kinase 29.8 77 0.0017 24.0 3.5 30 44-73 58-93 (334)
254 cd08181 PPD-like 1,3-propanedi 29.5 73 0.0016 24.4 3.3 31 43-74 81-133 (357)
255 PLN00011 cysteine synthase 29.4 2.5E+02 0.0054 21.2 7.0 51 46-97 69-124 (323)
256 cd08177 MAR Maleylacetate redu 29.2 77 0.0017 24.0 3.4 31 44-75 76-111 (337)
257 TIGR02478 6PF1K_euk 6-phosphof 29.1 2.8E+02 0.0062 23.9 7.0 61 51-111 195-272 (745)
258 TIGR02699 archaeo_AfpA archaeo 29.0 1.5E+02 0.0032 20.7 4.5 17 58-74 108-124 (174)
259 cd08550 GlyDH-like Glycerol_de 28.8 79 0.0017 24.1 3.4 30 44-74 76-110 (349)
260 PF00391 PEP-utilizers: PEP-ut 28.3 75 0.0016 18.8 2.6 29 44-72 29-60 (80)
261 PRK14071 6-phosphofructokinase 28.1 94 0.002 24.2 3.7 31 44-74 106-140 (360)
262 PF14350 Beta_protein: Beta pr 27.5 97 0.0021 23.5 3.7 63 50-112 77-147 (347)
263 PRK10964 ADP-heptose:LPS hepto 27.5 68 0.0015 23.8 2.8 67 39-112 249-321 (322)
264 PRK00861 putative lipid kinase 27.2 86 0.0019 23.2 3.3 30 44-73 56-89 (300)
265 PRK06276 acetolactate synthase 26.7 3.6E+02 0.0078 22.1 7.3 29 44-72 62-96 (586)
266 COG1560 HtrB Lauroyl/myristoyl 26.3 2.9E+02 0.0063 21.0 6.1 41 50-90 107-148 (308)
267 PF00072 Response_reg: Respons 25.5 1.5E+02 0.0033 17.4 5.1 43 64-108 70-112 (112)
268 PRK13982 bifunctional SbtC-lik 25.4 3.7E+02 0.0081 21.9 6.9 69 44-112 145-247 (475)
269 PF05690 ThiG: Thiazole biosyn 25.4 1.4E+02 0.003 22.2 3.9 29 66-94 122-150 (247)
270 cd01451 vWA_Magnesium_chelatas 25.3 2.2E+02 0.0047 19.1 5.4 46 63-108 130-177 (178)
271 cd08187 BDH Butanol dehydrogen 24.6 1E+02 0.0023 23.8 3.5 30 44-74 85-137 (382)
272 PRK10736 hypothetical protein; 24.2 2.5E+02 0.0055 22.1 5.5 59 44-107 219-283 (374)
273 COG2022 ThiG Uncharacterized e 24.2 78 0.0017 23.5 2.5 45 65-109 128-180 (262)
274 COG2230 Cfa Cyclopropane fatty 24.1 42 0.00091 25.3 1.1 47 44-90 72-121 (283)
275 PF02776 TPP_enzyme_N: Thiamin 23.7 1.5E+02 0.0032 20.0 3.7 29 44-72 63-97 (172)
276 PF07128 DUF1380: Protein of u 23.7 45 0.00097 22.5 1.1 68 45-112 63-138 (139)
277 cd08180 PDD 1,3-propanediol de 23.5 1.1E+02 0.0024 23.1 3.4 30 44-74 77-118 (332)
278 PRK07525 sulfoacetaldehyde ace 23.5 3.9E+02 0.0085 21.9 6.7 29 44-72 67-101 (588)
279 PRK06555 pyrophosphate--fructo 23.4 1.2E+02 0.0025 24.2 3.5 34 41-74 108-150 (403)
280 PF00365 PFK: Phosphofructokin 23.3 74 0.0016 23.8 2.3 31 44-74 91-125 (282)
281 PF12965 DUF3854: Domain of un 23.2 1.2E+02 0.0025 20.0 3.0 33 40-73 5-37 (130)
282 PRK13932 stationary phase surv 22.8 89 0.0019 23.2 2.6 23 51-73 111-133 (257)
283 PF01075 Glyco_transf_9: Glyco 22.8 78 0.0017 22.3 2.3 30 39-71 179-208 (247)
284 PRK07238 bifunctional RNase H/ 22.8 73 0.0016 24.4 2.3 24 45-68 313-336 (372)
285 COG0297 GlgA Glycogen synthase 22.7 1.6E+02 0.0034 24.1 4.1 83 19-111 347-440 (487)
286 TIGR01139 cysK cysteine syntha 22.6 3.2E+02 0.007 20.1 7.0 50 48-98 60-113 (298)
287 PRK07710 acetolactate synthase 22.4 2.6E+02 0.0055 22.9 5.4 29 44-72 77-111 (571)
288 CHL00162 thiG thiamin biosynth 22.2 86 0.0019 23.5 2.4 30 65-94 135-164 (267)
289 PF09884 DUF2111: Uncharacteri 22.2 38 0.00083 20.8 0.5 17 59-75 52-68 (84)
290 TIGR02638 lactal_redase lactal 22.1 1E+02 0.0022 23.8 3.0 30 44-74 85-139 (379)
291 cd08176 LPO Lactadehyde:propan 22.0 1.3E+02 0.0028 23.2 3.5 30 44-74 84-136 (377)
292 TIGR00087 surE 5'/3'-nucleotid 21.9 93 0.002 22.8 2.6 24 50-73 105-128 (244)
293 cd08174 G1PDH-like Glycerol-1- 21.8 1.3E+02 0.0028 22.7 3.4 29 45-74 75-108 (331)
294 cd08191 HHD 6-hydroxyhexanoate 21.8 1.3E+02 0.0027 23.4 3.4 30 44-74 78-130 (386)
295 COG3195 Uncharacterized protei 21.8 2.5E+02 0.0054 19.7 4.4 38 77-114 110-147 (176)
296 PF09989 DUF2229: CoA enzyme a 21.6 2.5E+02 0.0054 20.1 4.7 38 75-113 12-49 (221)
297 PF12000 Glyco_trans_4_3: Gkyc 21.5 54 0.0012 22.8 1.2 28 46-73 67-96 (171)
298 COG0379 NadA Quinolinate synth 21.4 3.4E+02 0.0074 21.0 5.5 45 21-72 122-166 (324)
299 PRK06112 acetolactate synthase 21.4 1.2E+02 0.0026 24.8 3.4 29 44-72 73-107 (578)
300 cd08193 HVD 5-hydroxyvalerate 21.3 1.3E+02 0.0029 23.1 3.4 30 44-74 82-134 (376)
301 cd01141 TroA_d Periplasmic bin 21.2 1.9E+02 0.0042 19.3 4.0 33 40-73 65-100 (186)
302 cd00363 PFK Phosphofructokinas 21.2 1.5E+02 0.0034 22.7 3.8 31 44-74 91-130 (338)
303 cd08169 DHQ-like Dehydroquinat 20.9 1.6E+02 0.0034 22.6 3.8 30 44-74 82-118 (344)
304 COG5310 Homospermidine synthas 20.6 74 0.0016 25.1 1.9 31 20-60 278-308 (481)
305 TIGR03852 sucrose_gtfA sucrose 20.6 1.1E+02 0.0023 24.9 2.8 45 64-108 361-405 (470)
306 PRK14072 6-phosphofructokinase 20.6 1.5E+02 0.0032 23.6 3.6 31 44-74 102-141 (416)
307 PRK11864 2-ketoisovalerate fer 20.5 3.4E+02 0.0074 20.7 5.4 64 51-114 105-197 (300)
308 PRK12361 hypothetical protein; 20.4 1.2E+02 0.0025 24.8 3.1 31 44-74 296-330 (547)
309 cd08551 Fe-ADH iron-containing 20.3 1.4E+02 0.0031 22.8 3.4 30 44-74 79-131 (370)
310 PF04558 tRNA_synt_1c_R1: Glut 20.2 1E+02 0.0022 21.3 2.3 24 85-113 109-132 (164)
311 COG2099 CobK Precorrin-6x redu 20.2 1.2E+02 0.0026 22.6 2.8 32 40-71 191-228 (257)
312 cd00764 Eukaryotic_PFK Phospho 20.1 5.3E+02 0.011 22.5 6.9 61 51-111 198-275 (762)
313 cd07067 HP_PGM_like Histidine 20.0 1E+02 0.0022 19.9 2.3 23 45-67 100-122 (153)
No 1
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=99.95 E-value=9.5e-29 Score=194.02 Aligned_cols=106 Identities=39% Similarity=0.695 Sum_probs=92.2
Q ss_pred eeeeecCC--CCCCCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHH
Q psy10598 8 LFLAFLTS--PGCHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAE 85 (119)
Q Consensus 8 ~~~~~~~~--~~~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~ 85 (119)
.++|+.+. +..+|+|+.+.+|+||.+ +|+||++++||||||+||+.||+++|+|+|++|+++||..||++++
T Consensus 308 ~~iW~~~~~~~~~l~~n~~~~~W~PQ~~------lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~ 381 (500)
T PF00201_consen 308 RFIWKYEGEPPENLPKNVLIVKWLPQND------LLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVE 381 (500)
T ss_dssp EEEEEETCSHGCHHHTTEEEESS--HHH------HHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHH
T ss_pred cccccccccccccccceEEEeccccchh------hhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEE
Confidence 57788775 356889999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HcCceeEecCCCCCHHHHHHHHHHHhcCcccccC
Q psy10598 86 EEGYGLMVDFDVFDYEELRRKVHQVLYEPKYVGN 119 (119)
Q Consensus 86 ~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~ 119 (119)
+.|+|+.++..+++.++|.++|+++++|++|++|
T Consensus 382 ~~G~g~~l~~~~~~~~~l~~ai~~vl~~~~y~~~ 415 (500)
T PF00201_consen 382 EKGVGVVLDKNDLTEEELRAAIREVLENPSYKEN 415 (500)
T ss_dssp HTTSEEEEGGGC-SHHHHHHHHHHHHHSHHHHHH
T ss_pred EEeeEEEEEecCCcHHHHHHHHHHHHhhhHHHHH
Confidence 9999999999999999999999999999999864
No 2
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=99.94 E-value=2e-27 Score=188.13 Aligned_cols=106 Identities=31% Similarity=0.371 Sum_probs=98.4
Q ss_pred eeeeecCC--CC-CCCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHH
Q psy10598 8 LFLAFLTS--PG-CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKA 84 (119)
Q Consensus 8 ~~~~~~~~--~~-~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~ 84 (119)
.++|+.+. .. ++|+|+.+.+|+||.+ +|+||++++||||||.||+.||+++|+|+|++|.++||..||+++
T Consensus 330 ~viw~~~~~~~~~~~p~Nv~i~~w~Pq~~------lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv 403 (507)
T PHA03392 330 NVLWKYDGEVEAINLPANVLTQKWFPQRA------VLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKY 403 (507)
T ss_pred eEEEEECCCcCcccCCCceEEecCCCHHH------HhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHH
Confidence 46677753 22 6899999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHcCceeEecCCCCCHHHHHHHHHHHhcCcccccC
Q psy10598 85 EEEGYGLMVDFDVFDYEELRRKVHQVLYEPKYVGN 119 (119)
Q Consensus 85 ~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~ 119 (119)
++.|+|+.++..+++.++|.++|+++++|++|+++
T Consensus 404 ~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~y~~~ 438 (507)
T PHA03392 404 VELGIGRALDTVTVSAAQLVLAIVDVIENPKYRKN 438 (507)
T ss_pred HHcCcEEEeccCCcCHHHHHHHHHHHhCCHHHHHH
Confidence 99999999998899999999999999999999864
No 3
>PLN02670 transferase, transferring glycosyl groups
Probab=99.91 E-value=1.3e-24 Score=170.70 Aligned_cols=105 Identities=19% Similarity=0.278 Sum_probs=91.7
Q ss_pred eeeeecCCCC--------CCCCC---------EEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEE
Q psy10598 8 LFLAFLTSPG--------CHGYN---------ILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVI 70 (119)
Q Consensus 8 ~~~~~~~~~~--------~l~~n---------v~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~ 70 (119)
.|+|....+. .+|+| +.+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|+
T Consensus 309 ~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~------IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~ 382 (472)
T PLN02670 309 PFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVK------ILSHESVGGFLTHCGWNSVVEGLGFGRVLIL 382 (472)
T ss_pred CEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHH------HhcCcccceeeecCCcchHHHHHHcCCCEEe
Confidence 5788876532 24544 77789999999 9999999999999999999999999999999
Q ss_pred ccCcccHHHHHHHHHHcCceeEecCC----CCCHHHHHHHHHHHhcCc---cccc
Q psy10598 71 VPLFADQKQNGQKAEEEGYGLMVDFD----VFDYEELRRKVHQVLYEP---KYVG 118 (119)
Q Consensus 71 ~P~~~dQ~~na~~~~~~G~g~~l~~~----~~~~~~l~~~i~~~l~~~---~~~~ 118 (119)
+|+++||..||+++++.|+|+.+... .++.+++.++|++++.++ +||+
T Consensus 383 ~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~ 437 (472)
T PLN02670 383 FPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRD 437 (472)
T ss_pred CcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHH
Confidence 99999999999999999999998642 378999999999999775 5765
No 4
>PLN03004 UDP-glycosyltransferase
Probab=99.91 E-value=2e-24 Score=168.98 Aligned_cols=93 Identities=23% Similarity=0.318 Sum_probs=86.3
Q ss_pred CCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHH-cCceeEecCC---
Q psy10598 21 YNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEE-EGYGLMVDFD--- 96 (119)
Q Consensus 21 ~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~-~G~g~~l~~~--- 96 (119)
.|+.+.+|+||.+ +|+|+++++||||||+||++|++++|||+|++|++.||..||+++++ .|+|+.++.+
T Consensus 334 ~g~~v~~W~PQ~~------iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~ 407 (451)
T PLN03004 334 KGMVVKSWAPQVP------VLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETG 407 (451)
T ss_pred CcEEEEeeCCHHH------HhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCC
Confidence 6899999999999 99999999999999999999999999999999999999999999975 7999999743
Q ss_pred CCCHHHHHHHHHHHhcCcccccC
Q psy10598 97 VFDYEELRRKVHQVLYEPKYVGN 119 (119)
Q Consensus 97 ~~~~~~l~~~i~~~l~~~~~~~~ 119 (119)
.++.++|.++|++++.+++||++
T Consensus 408 ~~~~e~l~~av~~vm~~~~~r~~ 430 (451)
T PLN03004 408 FVSSTEVEKRVQEIIGECPVRER 430 (451)
T ss_pred ccCHHHHHHHHHHHhcCHHHHHH
Confidence 46999999999999998888763
No 5
>PLN02554 UDP-glycosyltransferase family protein
Probab=99.90 E-value=1.2e-24 Score=171.43 Aligned_cols=94 Identities=28% Similarity=0.378 Sum_probs=84.5
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHH-HHHHcCceeEecC---
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQ-KAEEEGYGLMVDF--- 95 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~-~~~~~G~g~~l~~--- 95 (119)
++|+.+.+|+||.+ +|+|+++++||||||+||++|++++|+|||++|+++||+.||+ .++++|+|+.+..
T Consensus 341 ~~~g~v~~W~PQ~~------iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~ 414 (481)
T PLN02554 341 KDIGKVIGWAPQVA------VLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWR 414 (481)
T ss_pred ccCceEEeeCCHHH------HhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecccc
Confidence 45788899999999 9999999999999999999999999999999999999999995 5788999999853
Q ss_pred --------CCCCHHHHHHHHHHHhc-CcccccC
Q psy10598 96 --------DVFDYEELRRKVHQVLY-EPKYVGN 119 (119)
Q Consensus 96 --------~~~~~~~l~~~i~~~l~-~~~~~~~ 119 (119)
..++.+++.++|++++. +++||++
T Consensus 415 ~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~ 447 (481)
T PLN02554 415 GDLLAGEMETVTAEEIERGIRCLMEQDSDVRKR 447 (481)
T ss_pred ccccccccCeEcHHHHHHHHHHHhcCCHHHHHH
Confidence 35789999999999996 6777753
No 6
>PLN02562 UDP-glycosyltransferase
Probab=99.90 E-value=4.2e-24 Score=167.09 Aligned_cols=93 Identities=18% Similarity=0.197 Sum_probs=85.9
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHH-cCceeEecCCC
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEE-EGYGLMVDFDV 97 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~-~G~g~~l~~~~ 97 (119)
.++|+.+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|+++||+.||+++++ .|+|+.+. +
T Consensus 326 ~~~~~~v~~w~PQ~~------iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~ 397 (448)
T PLN02562 326 VSKQGKVVSWAPQLE------VLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--G 397 (448)
T ss_pred hccCEEEEecCCHHH------HhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC--C
Confidence 457999999999999 99999999999999999999999999999999999999999999976 69888774 5
Q ss_pred CCHHHHHHHHHHHhcCcccccC
Q psy10598 98 FDYEELRRKVHQVLYEPKYVGN 119 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~~~~~~~~ 119 (119)
++.+++.++|++++.+++||++
T Consensus 398 ~~~~~l~~~v~~~l~~~~~r~~ 419 (448)
T PLN02562 398 FGQKEVEEGLRKVMEDSGMGER 419 (448)
T ss_pred CCHHHHHHHHHHHhCCHHHHHH
Confidence 7899999999999998888764
No 7
>PLN02208 glycosyltransferase family protein
Probab=99.90 E-value=5.3e-24 Score=166.27 Aligned_cols=89 Identities=21% Similarity=0.305 Sum_probs=82.4
Q ss_pred CCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHH-cCceeEecCCC--
Q psy10598 21 YNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEE-EGYGLMVDFDV-- 97 (119)
Q Consensus 21 ~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~-~G~g~~l~~~~-- 97 (119)
.|+.+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|+++||..||+++.+ .|+|+.+..++
T Consensus 311 ~g~~v~~W~PQ~~------iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~ 384 (442)
T PLN02208 311 RGVVWGGWVQQPL------ILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTG 384 (442)
T ss_pred CCcEeeccCCHHH------HhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCC
Confidence 6888889999999 99999999999999999999999999999999999999999998766 89999997544
Q ss_pred -CCHHHHHHHHHHHhcCcc
Q psy10598 98 -FDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 98 -~~~~~l~~~i~~~l~~~~ 115 (119)
++.+++.++|++++.+++
T Consensus 385 ~~~~~~l~~ai~~~m~~~~ 403 (442)
T PLN02208 385 WFSKESLSNAIKSVMDKDS 403 (442)
T ss_pred cCcHHHHHHHHHHHhcCCc
Confidence 899999999999997653
No 8
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.90 E-value=9.2e-24 Score=163.45 Aligned_cols=96 Identities=31% Similarity=0.499 Sum_probs=92.2
Q ss_pred CCCCCCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 15 SPGCHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 15 ~~~~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
...++|.|+.+.+|+||.. ++ +++|+||||||+||++|++++|+|+|++|...||+.||.++++.|+|+.+.
T Consensus 278 ~~~~~p~n~~v~~~~p~~~------~l--~~ad~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~ 349 (406)
T COG1819 278 TLVNVPDNVIVADYVPQLE------LL--PRADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALP 349 (406)
T ss_pred ccccCCCceEEecCCCHHH------Hh--hhcCEEEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecC
Confidence 3577899999999999999 99 999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhcCccccc
Q psy10598 95 FDVFDYEELRRKVHQVLYEPKYVG 118 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~~~~~ 118 (119)
.+.++.+.|+++|+++|+++.|++
T Consensus 350 ~~~l~~~~l~~av~~vL~~~~~~~ 373 (406)
T COG1819 350 FEELTEERLRAAVNEVLADDSYRR 373 (406)
T ss_pred cccCCHHHHHHHHHHHhcCHHHHH
Confidence 989999999999999999998876
No 9
>PLN02207 UDP-glycosyltransferase
Probab=99.89 E-value=1.7e-23 Score=164.30 Aligned_cols=95 Identities=19% Similarity=0.295 Sum_probs=83.7
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHH-cCceeEec---
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEE-EGYGLMVD--- 94 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~-~G~g~~l~--- 94 (119)
.++|..+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|+++||+.||+++++ +|+|+.+.
T Consensus 330 ~~~~g~i~~W~PQ~~------IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~ 403 (468)
T PLN02207 330 VSGRGMICGWSPQVE------ILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDY 403 (468)
T ss_pred cCCCeEEEEeCCHHH------HhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccc
Confidence 457888999999999 99999999999999999999999999999999999999999998876 89998663
Q ss_pred ---C-CCCCHHHHHHHHHHHhc--CcccccC
Q psy10598 95 ---F-DVFDYEELRRKVHQVLY--EPKYVGN 119 (119)
Q Consensus 95 ---~-~~~~~~~l~~~i~~~l~--~~~~~~~ 119 (119)
. ..++.++|.++|++++. +++||++
T Consensus 404 ~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~ 434 (468)
T PLN02207 404 RVHSDEIVNANEIETAIRCVMNKDNNVVRKR 434 (468)
T ss_pred ccccCCcccHHHHHHHHHHHHhcchHHHHHH
Confidence 1 23589999999999996 4566653
No 10
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.89 E-value=3.3e-23 Score=162.15 Aligned_cols=89 Identities=28% Similarity=0.362 Sum_probs=83.2
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHc-CceeEecCCC
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVDFDV 97 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~-G~g~~l~~~~ 97 (119)
.++|..+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|++.||+.||+++++. |+|+.+. +.
T Consensus 322 ~~~~g~v~~w~PQ~~------iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~ 394 (451)
T PLN02410 322 ISGRGYIVKWAPQKE------VLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GD 394 (451)
T ss_pred ccCCeEEEccCCHHH------HhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-Cc
Confidence 347889999999999 999999999999999999999999999999999999999999999875 9999987 67
Q ss_pred CCHHHHHHHHHHHhcCc
Q psy10598 98 FDYEELRRKVHQVLYEP 114 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~~~ 114 (119)
++.+++.++|++++.++
T Consensus 395 ~~~~~v~~av~~lm~~~ 411 (451)
T PLN02410 395 LDRGAVERAVKRLMVEE 411 (451)
T ss_pred ccHHHHHHHHHHHHcCC
Confidence 89999999999999775
No 11
>KOG1192|consensus
Probab=99.88 E-value=6.6e-23 Score=160.49 Aligned_cols=107 Identities=33% Similarity=0.435 Sum_probs=94.0
Q ss_pred eeeeeeecCCC------CCCC----CCEEEEeeccCCcccccccc-ccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCc
Q psy10598 6 AFLFLAFLTSP------GCHG----YNILVFGVFPFTSHFRKCYY-IPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLF 74 (119)
Q Consensus 6 ~~~~~~~~~~~------~~l~----~nv~~~~~~p~~~~~~~~~l-l~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~ 74 (119)
...|+|+.+.. ...+ +||...+|+||.+ + +.|+++++||||||+||++|++++|+|++++|++
T Consensus 310 ~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~------lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf 383 (496)
T KOG1192|consen 310 GVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQND------LLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLF 383 (496)
T ss_pred CceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHH------HhcCCCcCcEEEECCcccHHHHHHhcCCceecCCcc
Confidence 45689999863 3443 4899999999999 6 6999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCccccc
Q psy10598 75 ADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEPKYVG 118 (119)
Q Consensus 75 ~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~ 118 (119)
+||..||+++++.|.+.++...+.+...+.+++.+++.+++|++
T Consensus 384 ~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~~~y~~ 427 (496)
T KOG1192|consen 384 GDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILENEEYKE 427 (496)
T ss_pred ccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcChHHHH
Confidence 99999999999999888888777766669999999999888865
No 12
>PLN02167 UDP-glycosyltransferase family protein
Probab=99.88 E-value=3.6e-23 Score=162.79 Aligned_cols=90 Identities=23% Similarity=0.387 Sum_probs=80.3
Q ss_pred EEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHH-HHHcCceeEecC------
Q psy10598 23 ILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQK-AEEEGYGLMVDF------ 95 (119)
Q Consensus 23 v~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~-~~~~G~g~~l~~------ 95 (119)
..+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|+++||+.||++ ++++|+|+.+..
T Consensus 342 g~v~~w~PQ~~------iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 415 (475)
T PLN02167 342 GLVCGWAPQVE------ILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY 415 (475)
T ss_pred eeeeccCCHHH------HhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc
Confidence 36889999999 99999999999999999999999999999999999999999986 678999998853
Q ss_pred -CCCCHHHHHHHHHHHhcCc-cccc
Q psy10598 96 -DVFDYEELRRKVHQVLYEP-KYVG 118 (119)
Q Consensus 96 -~~~~~~~l~~~i~~~l~~~-~~~~ 118 (119)
..++.+++.++|++++.++ .||+
T Consensus 416 ~~~~~~~~l~~av~~~m~~~~~~r~ 440 (475)
T PLN02167 416 GEIVKADEIAGAVRSLMDGEDVPRK 440 (475)
T ss_pred CCcccHHHHHHHHHHHhcCCHHHHH
Confidence 2468999999999999754 5554
No 13
>PLN02210 UDP-glucosyl transferase
Probab=99.88 E-value=1.3e-22 Score=159.06 Aligned_cols=90 Identities=24% Similarity=0.335 Sum_probs=82.3
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHH-cCceeEecC---
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEE-EGYGLMVDF--- 95 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~-~G~g~~l~~--- 95 (119)
+++..+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|+++||+.||+++++ .|+|+.+..
T Consensus 323 ~~~g~v~~w~PQ~~------iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~ 396 (456)
T PLN02210 323 EGQGVVLEWSPQEK------ILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAV 396 (456)
T ss_pred CCCeEEEecCCHHH------HhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEecccc
Confidence 36667899999999 99999999999999999999999999999999999999999999987 899999863
Q ss_pred -CCCCHHHHHHHHHHHhcCcc
Q psy10598 96 -DVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 96 -~~~~~~~l~~~i~~~l~~~~ 115 (119)
..++.++|.++|++++.+++
T Consensus 397 ~~~~~~~~l~~av~~~m~~~~ 417 (456)
T PLN02210 397 DGELKVEEVERCIEAVTEGPA 417 (456)
T ss_pred CCcCCHHHHHHHHHHHhcCch
Confidence 25799999999999997754
No 14
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=99.88 E-value=2.4e-22 Score=158.26 Aligned_cols=87 Identities=30% Similarity=0.426 Sum_probs=81.1
Q ss_pred CEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHH-HHcCceeEecC--CCC
Q psy10598 22 NILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKA-EEEGYGLMVDF--DVF 98 (119)
Q Consensus 22 nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~-~~~G~g~~l~~--~~~ 98 (119)
++.+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|+++||+.||+++ +++|+|+.++. ..+
T Consensus 339 g~vv~~W~PQ~~------iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~ 412 (481)
T PLN02992 339 GFVVPSWAPQAE------ILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVI 412 (481)
T ss_pred CEEEeecCCHHH------HhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcc
Confidence 488899999999 999999999999999999999999999999999999999999999 48999999975 348
Q ss_pred CHHHHHHHHHHHhcCc
Q psy10598 99 DYEELRRKVHQVLYEP 114 (119)
Q Consensus 99 ~~~~l~~~i~~~l~~~ 114 (119)
+.+++.++|++++.++
T Consensus 413 ~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 413 SRSKIEALVRKVMVEE 428 (481)
T ss_pred cHHHHHHHHHHHhcCC
Confidence 9999999999999764
No 15
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=99.87 E-value=1.3e-22 Score=158.97 Aligned_cols=91 Identities=26% Similarity=0.352 Sum_probs=80.4
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHH-cCceeEec--C
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEE-EGYGLMVD--F 95 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~-~G~g~~l~--~ 95 (119)
.++|..+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|+++||..||+++++ +|+|+.+. .
T Consensus 325 ~~~~g~v~~W~PQ~~------iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~ 398 (455)
T PLN02152 325 LEEVGMIVSWCSQIE------VLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENS 398 (455)
T ss_pred ccCCeEEEeeCCHHH------HhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCc
Confidence 457889999999999 99999999999999999999999999999999999999999999987 46665553 2
Q ss_pred C-CCCHHHHHHHHHHHhcCcc
Q psy10598 96 D-VFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 96 ~-~~~~~~l~~~i~~~l~~~~ 115 (119)
+ ..+.++|.++|++++++++
T Consensus 399 ~~~~~~e~l~~av~~vm~~~~ 419 (455)
T PLN02152 399 EGLVERGEIRRCLEAVMEEKS 419 (455)
T ss_pred CCcCcHHHHHHHHHHHHhhhH
Confidence 3 3589999999999997654
No 16
>PLN02173 UDP-glucosyl transferase family protein
Probab=99.87 E-value=1.9e-22 Score=157.70 Aligned_cols=90 Identities=26% Similarity=0.361 Sum_probs=81.9
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHc-CceeEecCC--
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVDFD-- 96 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~-G~g~~l~~~-- 96 (119)
++|+.+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|+++||..||+++++. |+|+.+..+
T Consensus 316 ~~~~~i~~W~PQ~~------iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~ 389 (449)
T PLN02173 316 KDKSLVLKWSPQLQ------VLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKE 389 (449)
T ss_pred CCceEEeCCCCHHH------HhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeeccc
Confidence 57899999999999 999999999999999999999999999999999999999999999874 999887532
Q ss_pred --CCCHHHHHHHHHHHhcCcc
Q psy10598 97 --VFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 97 --~~~~~~l~~~i~~~l~~~~ 115 (119)
.++.+++.+++++++.+++
T Consensus 390 ~~~~~~e~v~~av~~vm~~~~ 410 (449)
T PLN02173 390 SGIAKREEIEFSIKEVMEGEK 410 (449)
T ss_pred CCcccHHHHHHHHHHHhcCCh
Confidence 2589999999999997754
No 17
>PLN03007 UDP-glucosyltransferase family protein
Probab=99.87 E-value=2.6e-22 Score=158.24 Aligned_cols=93 Identities=25% Similarity=0.312 Sum_probs=80.4
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHH-cCceeEe-----
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEE-EGYGLMV----- 93 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~-~G~g~~l----- 93 (119)
+.|+.+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|+++||..||+++++ .++|+.+
T Consensus 344 ~~g~~v~~w~PQ~~------iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~ 417 (482)
T PLN03007 344 GKGLIIRGWAPQVL------ILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKL 417 (482)
T ss_pred cCCEEEecCCCHHH------HhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccc
Confidence 45889999999999 99999999999999999999999999999999999999999998863 3444433
Q ss_pred ---cCCCCCHHHHHHHHHHHhcCc---cccc
Q psy10598 94 ---DFDVFDYEELRRKVHQVLYEP---KYVG 118 (119)
Q Consensus 94 ---~~~~~~~~~l~~~i~~~l~~~---~~~~ 118 (119)
+...++.++|.++|++++.++ +||+
T Consensus 418 ~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~ 448 (482)
T PLN03007 418 VKVKGDFISREKVEKAVREVIVGEEAEERRL 448 (482)
T ss_pred cccccCcccHHHHHHHHHHHhcCcHHHHHHH
Confidence 334579999999999999887 5654
No 18
>PLN00164 glucosyltransferase; Provisional
Probab=99.87 E-value=4.4e-22 Score=156.84 Aligned_cols=88 Identities=27% Similarity=0.410 Sum_probs=79.1
Q ss_pred EEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHH-HcCceeEecCC-----
Q psy10598 23 ILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAE-EEGYGLMVDFD----- 96 (119)
Q Consensus 23 v~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~-~~G~g~~l~~~----- 96 (119)
+.+.+|+||.+ +|+|+++.+||||||+||++|++++|+|+|++|+++||+.||+++. .+|+|+.+..+
T Consensus 341 ~~v~~w~PQ~~------iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~ 414 (480)
T PLN00164 341 LVWPTWAPQKE------ILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDN 414 (480)
T ss_pred eEEeecCCHHH------HhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCC
Confidence 67779999999 9999999999999999999999999999999999999999999875 58999988532
Q ss_pred CCCHHHHHHHHHHHhcCccc
Q psy10598 97 VFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 97 ~~~~~~l~~~i~~~l~~~~~ 116 (119)
.++.++|.++|++++.++++
T Consensus 415 ~~~~e~l~~av~~vm~~~~~ 434 (480)
T PLN00164 415 FVEAAELERAVRSLMGGGEE 434 (480)
T ss_pred cCcHHHHHHHHHHHhcCCch
Confidence 36899999999999977543
No 19
>PLN02448 UDP-glycosyltransferase family protein
Probab=99.87 E-value=3.5e-22 Score=156.65 Aligned_cols=102 Identities=26% Similarity=0.256 Sum_probs=86.6
Q ss_pred eeeeeecCCC----CC-CCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHH
Q psy10598 7 FLFLAFLTSP----GC-HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNG 81 (119)
Q Consensus 7 ~~~~~~~~~~----~~-l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na 81 (119)
..|+|..... .+ .++|+.+.+|+||.+ +|.|+++++||||||+||++|++++|+|+|++|.+.||+.||
T Consensus 304 ~~~lw~~~~~~~~~~~~~~~~~~v~~w~pQ~~------iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na 377 (459)
T PLN02448 304 VRFLWVARGEASRLKEICGDMGLVVPWCDQLK------VLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNS 377 (459)
T ss_pred CCEEEEEcCchhhHhHhccCCEEEeccCCHHH------HhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhH
Confidence 3566754322 12 236899999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHH-cCceeEecC-----CCCCHHHHHHHHHHHhcCc
Q psy10598 82 QKAEE-EGYGLMVDF-----DVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 82 ~~~~~-~G~g~~l~~-----~~~~~~~l~~~i~~~l~~~ 114 (119)
+++++ +|+|+.+.. ..++.++|.+++++++.++
T Consensus 378 ~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~ 416 (459)
T PLN02448 378 KLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLE 416 (459)
T ss_pred HHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCC
Confidence 99987 688887742 2468999999999999764
No 20
>PLN02555 limonoid glucosyltransferase
Probab=99.86 E-value=6.3e-22 Score=155.92 Aligned_cols=89 Identities=21% Similarity=0.300 Sum_probs=81.9
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHc-CceeEec----
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVD---- 94 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~-G~g~~l~---- 94 (119)
++|+.+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|+++||..|++++++. |+|+.+.
T Consensus 336 ~~~g~v~~W~PQ~~------iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~ 409 (480)
T PLN02555 336 GDKGKIVQWCPQEK------VLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEA 409 (480)
T ss_pred CCceEEEecCCHHH------HhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcc
Confidence 46889999999999 999999999999999999999999999999999999999999999875 9999993
Q ss_pred -CCCCCHHHHHHHHHHHhcCc
Q psy10598 95 -FDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 95 -~~~~~~~~l~~~i~~~l~~~ 114 (119)
...++.+++.++|++++.++
T Consensus 410 ~~~~v~~~~v~~~v~~vm~~~ 430 (480)
T PLN02555 410 ENKLITREEVAECLLEATVGE 430 (480)
T ss_pred ccCcCcHHHHHHHHHHHhcCc
Confidence 34578999999999999654
No 21
>PLN02764 glycosyltransferase family protein
Probab=99.86 E-value=3.3e-22 Score=156.42 Aligned_cols=87 Identities=25% Similarity=0.363 Sum_probs=78.8
Q ss_pred CEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHH-HcCceeEecCC---C
Q psy10598 22 NILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAE-EEGYGLMVDFD---V 97 (119)
Q Consensus 22 nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~-~~G~g~~l~~~---~ 97 (119)
++.+.+|+||.+ +|+|+++++||||||+||++|++++|+|+|++|++.||+.||++++ ..|+|+.+..+ .
T Consensus 318 G~v~~~W~PQ~~------vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~ 391 (453)
T PLN02764 318 GVVWGGWVQQPL------ILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGW 391 (453)
T ss_pred CcEEeCCCCHHH------HhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCc
Confidence 345669999999 9999999999999999999999999999999999999999999996 58999887533 4
Q ss_pred CCHHHHHHHHHHHhcCc
Q psy10598 98 FDYEELRRKVHQVLYEP 114 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~~~ 114 (119)
++.+++.+++++++.++
T Consensus 392 ~~~e~i~~av~~vm~~~ 408 (453)
T PLN02764 392 FSKESLRDAINSVMKRD 408 (453)
T ss_pred cCHHHHHHHHHHHhcCC
Confidence 79999999999999764
No 22
>PLN00414 glycosyltransferase family protein
Probab=99.86 E-value=3.6e-22 Score=156.12 Aligned_cols=86 Identities=27% Similarity=0.347 Sum_probs=78.3
Q ss_pred EEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHH-HcCceeEecCC---CC
Q psy10598 23 ILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAE-EEGYGLMVDFD---VF 98 (119)
Q Consensus 23 v~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~-~~G~g~~l~~~---~~ 98 (119)
..+.+|+||.. +|+|+++++||||||+||++|++++|+|+|++|++.||..||++++ +.|+|+.+..+ .+
T Consensus 314 ~vv~~w~PQ~~------vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~ 387 (446)
T PLN00414 314 IVWEGWVEQPL------ILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWF 387 (446)
T ss_pred eEEeccCCHHH------HhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCcc
Confidence 34559999999 9999999999999999999999999999999999999999999995 68999998643 37
Q ss_pred CHHHHHHHHHHHhcCc
Q psy10598 99 DYEELRRKVHQVLYEP 114 (119)
Q Consensus 99 ~~~~l~~~i~~~l~~~ 114 (119)
+.+++.+++++++.++
T Consensus 388 ~~~~i~~~v~~~m~~~ 403 (446)
T PLN00414 388 SKESLRDTVKSVMDKD 403 (446)
T ss_pred CHHHHHHHHHHHhcCC
Confidence 9999999999999764
No 23
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.86 E-value=5e-22 Score=156.45 Aligned_cols=91 Identities=26% Similarity=0.286 Sum_probs=80.7
Q ss_pred CEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHH-HcCceeEecC---CC
Q psy10598 22 NILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAE-EEGYGLMVDF---DV 97 (119)
Q Consensus 22 nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~-~~G~g~~l~~---~~ 97 (119)
|+++.+|+||.+ +|.|+++++||||||+||++|++++|+|+|++|++.||..||+++. ++|+|+.+.. ..
T Consensus 344 g~~v~~w~PQ~~------vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~ 417 (477)
T PLN02863 344 GLVIRGWAPQVA------ILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTV 417 (477)
T ss_pred CEEecCCCCHHH------HhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCC
Confidence 577889999999 9999999999999999999999999999999999999999999975 5799998843 23
Q ss_pred CCHHHHHHHHHHHh-cCccccc
Q psy10598 98 FDYEELRRKVHQVL-YEPKYVG 118 (119)
Q Consensus 98 ~~~~~l~~~i~~~l-~~~~~~~ 118 (119)
.+.+++.+++++++ ++++||+
T Consensus 418 ~~~~~v~~~v~~~m~~~~~~r~ 439 (477)
T PLN02863 418 PDSDELARVFMESVSENQVERE 439 (477)
T ss_pred cCHHHHHHHHHHHhhccHHHHH
Confidence 57899999999988 5666665
No 24
>PLN03015 UDP-glucosyl transferase
Probab=99.85 E-value=1.9e-21 Score=152.70 Aligned_cols=84 Identities=29% Similarity=0.385 Sum_probs=77.9
Q ss_pred EEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHH-HHcCceeEec----CCC
Q psy10598 23 ILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKA-EEEGYGLMVD----FDV 97 (119)
Q Consensus 23 v~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~-~~~G~g~~l~----~~~ 97 (119)
+.+.+|+||.+ +|+|+++++||||||+||++|++++|+|++++|++.||..||+++ +..|+|+.+. .+.
T Consensus 337 l~v~~W~PQ~~------vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~ 410 (470)
T PLN03015 337 LVVTQWAPQVE------ILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKV 410 (470)
T ss_pred eEEEecCCHHH------HhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCc
Confidence 67889999999 999999999999999999999999999999999999999999998 6789999985 235
Q ss_pred CCHHHHHHHHHHHhc
Q psy10598 98 FDYEELRRKVHQVLY 112 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~ 112 (119)
++.+++.++|++++.
T Consensus 411 v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 411 IGREEVASLVRKIVA 425 (470)
T ss_pred cCHHHHHHHHHHHHc
Confidence 789999999999995
No 25
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.85 E-value=1.3e-21 Score=149.63 Aligned_cols=92 Identities=25% Similarity=0.412 Sum_probs=85.6
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCC
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDV 97 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~ 97 (119)
..++|+.+.+|+|+.. +| +.||++|||||+||++|++++|+|+|++|...||..||+++++.|+|+.+...+
T Consensus 285 ~~~~~v~~~~~~p~~~------ll--~~~d~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~ 356 (401)
T cd03784 285 DLPDNVRVVDFVPHDW------LL--PRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE 356 (401)
T ss_pred CCCCceEEeCCCCHHH------Hh--hhhheeeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCccc
Confidence 5689999999999999 99 889999999999999999999999999999999999999999999999998877
Q ss_pred CCHHHHHHHHHHHhcCcccc
Q psy10598 98 FDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~~~~~~ 117 (119)
++.++|.++++++++++.++
T Consensus 357 ~~~~~l~~al~~~l~~~~~~ 376 (401)
T cd03784 357 LTAERLAAALRRLLDPPSRR 376 (401)
T ss_pred CCHHHHHHHHHHHhCHHHHH
Confidence 89999999999999865443
No 26
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.83 E-value=9.7e-21 Score=144.84 Aligned_cols=94 Identities=35% Similarity=0.501 Sum_probs=88.1
Q ss_pred CCCCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCC
Q psy10598 17 GCHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFD 96 (119)
Q Consensus 17 ~~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~ 96 (119)
..+++|+.+.+|+|+.+ ++ +.++++|||||.||++|++++|+|+|++|...||..|++++++.|+|+.+...
T Consensus 271 ~~~~~~v~~~~~~p~~~------ll--~~~~~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~ 342 (392)
T TIGR01426 271 GELPPNVEVRQWVPQLE------IL--KKADAFITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPE 342 (392)
T ss_pred ccCCCCeEEeCCCCHHH------HH--hhCCEEEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccc
Confidence 35789999999999988 89 78999999999999999999999999999999999999999999999999888
Q ss_pred CCCHHHHHHHHHHHhcCccccc
Q psy10598 97 VFDYEELRRKVHQVLYEPKYVG 118 (119)
Q Consensus 97 ~~~~~~l~~~i~~~l~~~~~~~ 118 (119)
+++.+++.++|++++.|++|++
T Consensus 343 ~~~~~~l~~ai~~~l~~~~~~~ 364 (392)
T TIGR01426 343 EVTAEKLREAVLAVLSDPRYAE 364 (392)
T ss_pred cCCHHHHHHHHHHHhcCHHHHH
Confidence 8899999999999999987764
No 27
>PLN02534 UDP-glycosyltransferase
Probab=99.80 E-value=1.2e-19 Score=143.31 Aligned_cols=87 Identities=30% Similarity=0.445 Sum_probs=78.0
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHH-HcCceeEecC---
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAE-EEGYGLMVDF--- 95 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~-~~G~g~~l~~--- 95 (119)
+.|+.+.+|+||.. +|.|+++.+||||||+||++|++++|+|+|++|.+.||..||++++ .+|+|+.+..
T Consensus 343 ~~g~~v~~w~pq~~------iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~ 416 (491)
T PLN02534 343 GRGLLIKGWAPQVL------ILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVP 416 (491)
T ss_pred cCCeeccCCCCHHH------HhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccccc
Confidence 45777889999999 9999999999999999999999999999999999999999999986 5799887731
Q ss_pred ---------C-CCCHHHHHHHHHHHhc
Q psy10598 96 ---------D-VFDYEELRRKVHQVLY 112 (119)
Q Consensus 96 ---------~-~~~~~~l~~~i~~~l~ 112 (119)
. ..+.+++.++|++++.
T Consensus 417 ~~~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 417 VRWGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred ccccccccccCccCHHHHHHHHHHHhc
Confidence 0 2689999999999995
No 28
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.73 E-value=7.1e-19 Score=120.66 Aligned_cols=90 Identities=24% Similarity=0.457 Sum_probs=75.8
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcc----cHHHHHHHHHHcCceeEecC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFA----DQKQNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~----dQ~~na~~~~~~G~g~~l~~ 95 (119)
+.|+.+.+|.+++.. ++ ..+|++|||||.+|++|++++|+|+|++|... +|..|+..+++.|+|..+..
T Consensus 54 ~~~v~~~~~~~~m~~-----~m--~~aDlvIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~ 126 (167)
T PF04101_consen 54 NPNVKVFGFVDNMAE-----LM--AAADLVISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDE 126 (167)
T ss_dssp TCCCEEECSSSSHHH-----HH--HHHSEEEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSEC
T ss_pred CCcEEEEechhhHHH-----HH--HHcCEEEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCc
Confidence 378999999997764 77 89999999999999999999999999999987 99999999999999999988
Q ss_pred CCCCHHHHHHHHHHHhcCccc
Q psy10598 96 DVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 96 ~~~~~~~l~~~i~~~l~~~~~ 116 (119)
...+.++|.++|.+++.++.+
T Consensus 127 ~~~~~~~L~~~i~~l~~~~~~ 147 (167)
T PF04101_consen 127 SELNPEELAEAIEELLSDPEK 147 (167)
T ss_dssp CC-SCCCHHHHHHCHCCCHH-
T ss_pred ccCCHHHHHHHHHHHHcCcHH
Confidence 777788999999999877654
No 29
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.67 E-value=3.1e-16 Score=117.61 Aligned_cols=91 Identities=21% Similarity=0.371 Sum_probs=78.3
Q ss_pred CCCCCCEEEEeecc-CCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcc--cHHHHHHHHHHcCceeEe
Q psy10598 17 GCHGYNILVFGVFP-FTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFA--DQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 17 ~~l~~nv~~~~~~p-~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~--dQ~~na~~~~~~G~g~~l 93 (119)
..+++|+.+.+|.| +... +| +.||++|||||++|++|++++|+|++++|... ||..||+.+++.|+|+.+
T Consensus 225 ~~~~~~v~~~~~~~~~~~~-----~l--~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 225 NSYNENVEIRRITTDNFKE-----LI--KNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred cccCCCEEEEECChHHHHH-----HH--HhCCEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 35678999999997 3432 66 89999999999999999999999999999854 899999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
+.+++ ++.+++.++++++.|.
T Consensus 298 ~~~~~---~~~~~~~~~~~~~~~~ 318 (321)
T TIGR00661 298 EYKEL---RLLEAILDIRNMKRYK 318 (321)
T ss_pred ChhhH---HHHHHHHhcccccccc
Confidence 87655 6777888888888775
No 30
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.66 E-value=4.4e-16 Score=115.73 Aligned_cols=86 Identities=23% Similarity=0.317 Sum_probs=77.6
Q ss_pred CCCCCEEEEeec-cCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccC--cccHHHHHHHHHHcCceeEec
Q psy10598 18 CHGYNILVFGVF-PFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPL--FADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 18 ~l~~nv~~~~~~-p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~--~~dQ~~na~~~~~~G~g~~l~ 94 (119)
..++|+.+.+|. +.... +| +.||++|||||.+|++|++++|+|++++|. ..||..||+.+++.|+|+.++
T Consensus 229 ~~~~ni~~~~~~~~~~~~-----~m--~~ad~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~ 301 (318)
T PF13528_consen 229 PRPGNIHVRPFSTPDFAE-----LM--AAADLVISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLS 301 (318)
T ss_pred ccCCCEEEeecChHHHHH-----HH--HhCCEEEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcc
Confidence 347899999987 54443 78 899999999999999999999999999999 689999999999999999999
Q ss_pred CCCCCHHHHHHHHHHH
Q psy10598 95 FDVFDYEELRRKVHQV 110 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~ 110 (119)
.++++++.|.++|+++
T Consensus 302 ~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 302 QEDLTPERLAEFLERL 317 (318)
T ss_pred cccCCHHHHHHHHhcC
Confidence 8999999999998764
No 31
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.60 E-value=1.9e-15 Score=115.22 Aligned_cols=87 Identities=20% Similarity=0.293 Sum_probs=77.4
Q ss_pred CEEEEeec-cCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCc-----ccHHHHHHHHHHcCceeEecC
Q psy10598 22 NILVFGVF-PFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLF-----ADQKQNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 22 nv~~~~~~-p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~-----~dQ~~na~~~~~~G~g~~l~~ 95 (119)
++.+.+|+ +++.. ++ ..+|++|||||++|+.|++++|+|+|++|+. .||..||+.+++.|+|..+..
T Consensus 235 ~~~~~~f~~~~m~~-----~~--~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~ 307 (352)
T PRK12446 235 GYRQFEYVHGELPD-----IL--AITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYE 307 (352)
T ss_pred CcEEecchhhhHHH-----HH--HhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcch
Confidence 55677887 56654 77 8999999999999999999999999999985 589999999999999999988
Q ss_pred CCCCHHHHHHHHHHHhcCcc
Q psy10598 96 DVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 96 ~~~~~~~l~~~i~~~l~~~~ 115 (119)
++++++.|.+++.+++.|++
T Consensus 308 ~~~~~~~l~~~l~~ll~~~~ 327 (352)
T PRK12446 308 EDVTVNSLIKHVEELSHNNE 327 (352)
T ss_pred hcCCHHHHHHHHHHHHcCHH
Confidence 89999999999999997753
No 32
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.58 E-value=4.3e-15 Score=113.59 Aligned_cols=85 Identities=21% Similarity=0.316 Sum_probs=79.3
Q ss_pred EEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCc----ccHHHHHHHHHHcCceeEecCCCC
Q psy10598 23 ILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLF----ADQKQNGQKAEEEGYGLMVDFDVF 98 (119)
Q Consensus 23 v~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~----~dQ~~na~~~~~~G~g~~l~~~~~ 98 (119)
+.+.+|++++.. ++ .++|++||++|++|+.|.++.|+|+|++|.. .||..||+.+++.|+|.++...++
T Consensus 237 ~~v~~f~~dm~~-----~~--~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~l 309 (357)
T COG0707 237 VRVLPFIDDMAA-----LL--AAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSEL 309 (357)
T ss_pred EEEeeHHhhHHH-----HH--HhccEEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccC
Confidence 899999999875 77 8999999999999999999999999999874 589999999999999999999999
Q ss_pred CHHHHHHHHHHHhcCc
Q psy10598 99 DYEELRRKVHQVLYEP 114 (119)
Q Consensus 99 ~~~~l~~~i~~~l~~~ 114 (119)
+++++.+.|.++++++
T Consensus 310 t~~~l~~~i~~l~~~~ 325 (357)
T COG0707 310 TPEKLAELILRLLSNP 325 (357)
T ss_pred CHHHHHHHHHHHhcCH
Confidence 9999999999999874
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.41 E-value=5.3e-13 Score=100.69 Aligned_cols=89 Identities=21% Similarity=0.291 Sum_probs=79.1
Q ss_pred CEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccC----cccHHHHHHHHHHcCceeEecCCC
Q psy10598 22 NILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPL----FADQKQNGQKAEEEGYGLMVDFDV 97 (119)
Q Consensus 22 nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~----~~dQ~~na~~~~~~G~g~~l~~~~ 97 (119)
++.+.+|.++... ++ +.+|++|+|+|.++++|++++|+|+|++|. .++|..|++.+.+.|.|..+..++
T Consensus 236 ~v~~~g~~~~~~~-----~~--~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~ 308 (357)
T PRK00726 236 NAEVVPFIDDMAA-----AY--AAADLVICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSD 308 (357)
T ss_pred cEEEeehHhhHHH-----HH--HhCCEEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEccc
Confidence 4888999865443 78 899999999999999999999999999986 368999999999999999998877
Q ss_pred CCHHHHHHHHHHHhcCcccc
Q psy10598 98 FDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~~~~~~ 117 (119)
+++++|.++|.++++|++++
T Consensus 309 ~~~~~l~~~i~~ll~~~~~~ 328 (357)
T PRK00726 309 LTPEKLAEKLLELLSDPERL 328 (357)
T ss_pred CCHHHHHHHHHHHHcCHHHH
Confidence 88999999999999987764
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.26 E-value=1.4e-11 Score=92.25 Aligned_cols=91 Identities=20% Similarity=0.311 Sum_probs=78.4
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccC----cccHHHHHHHHHHcCceeEecC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPL----FADQKQNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~----~~dQ~~na~~~~~~G~g~~l~~ 95 (119)
.+|+.+.+|...... ++ ..+|++|+++|.+|++||+++|+|+|++|. ..+|..|++.+.+.|.|..+..
T Consensus 234 ~~~v~~~g~~~~~~~-----~l--~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~ 306 (350)
T cd03785 234 GVNYEVFPFIDDMAA-----AY--AAADLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQ 306 (350)
T ss_pred CCCeEEeehhhhHHH-----HH--HhcCEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEec
Confidence 468999999855443 77 899999999999999999999999999985 4689999999999999999987
Q ss_pred CCCCHHHHHHHHHHHhcCcccc
Q psy10598 96 DVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 96 ~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
.+.+.+++.+++.+++.+++.+
T Consensus 307 ~~~~~~~l~~~i~~ll~~~~~~ 328 (350)
T cd03785 307 EELTPERLAAALLELLSDPERL 328 (350)
T ss_pred CCCCHHHHHHHHHHHhcCHHHH
Confidence 6678999999999999876543
No 35
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.24 E-value=2e-11 Score=92.52 Aligned_cols=89 Identities=21% Similarity=0.254 Sum_probs=81.3
Q ss_pred CCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCc---ccHHHHHHHHHHcCceeEecCCC
Q psy10598 21 YNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLF---ADQKQNGQKAEEEGYGLMVDFDV 97 (119)
Q Consensus 21 ~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~---~dQ~~na~~~~~~G~g~~l~~~~ 97 (119)
+++.+..|..+... ++ ..++.+|+.||+||++|-+++|+|.+++|.. .||.-.|++++++|+.-++.+++
T Consensus 277 p~i~I~~f~~~~~~-----ll--~gA~~vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~ 349 (400)
T COG4671 277 PHISIFEFRNDFES-----LL--AGARLVVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPEN 349 (400)
T ss_pred CCeEEEEhhhhHHH-----HH--HhhheeeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCccc
Confidence 68999999988764 77 7999999999999999999999999999985 58999999999999999999999
Q ss_pred CCHHHHHHHHHHHhcCccc
Q psy10598 98 FDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~~~~~ 116 (119)
++++.|+++|...+..|+.
T Consensus 350 lt~~~La~al~~~l~~P~~ 368 (400)
T COG4671 350 LTPQNLADALKAALARPSP 368 (400)
T ss_pred CChHHHHHHHHhcccCCCC
Confidence 9999999999998875543
No 36
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.23 E-value=2.1e-11 Score=93.89 Aligned_cols=86 Identities=23% Similarity=0.383 Sum_probs=75.6
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEc-cCcccHHHHHHHHHHcCceeEecCCCC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIV-PLFADQKQNGQKAEEEGYGLMVDFDVF 98 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~-P~~~dQ~~na~~~~~~G~g~~l~~~~~ 98 (119)
.+|+.+.+|.++... ++ ..+|++|+.+|..|+.||+++|+|+|+. |..++|..|+..+.+.|+|+...
T Consensus 255 ~~~v~~~G~~~~~~~-----~~--~~aDl~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~---- 323 (391)
T PRK13608 255 NENVLILGYTKHMNE-----WM--ASSQLMITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD---- 323 (391)
T ss_pred CCCeEEEeccchHHH-----HH--HhhhEEEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC----
Confidence 468999999987654 77 8999999999999999999999999998 77788889999999999998865
Q ss_pred CHHHHHHHHHHHhcCccc
Q psy10598 99 DYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 99 ~~~~l~~~i~~~l~~~~~ 116 (119)
+.+++.++|.++++|++.
T Consensus 324 ~~~~l~~~i~~ll~~~~~ 341 (391)
T PRK13608 324 TPEEAIKIVASLTNGNEQ 341 (391)
T ss_pred CHHHHHHHHHHHhcCHHH
Confidence 788999999999987654
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.14 E-value=1.2e-10 Score=88.74 Aligned_cols=88 Identities=22% Similarity=0.279 Sum_probs=75.2
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEc-cCcccHHHHHHHHHHcCceeEecCCC
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIV-PLFADQKQNGQKAEEEGYGLMVDFDV 97 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~-P~~~dQ~~na~~~~~~G~g~~l~~~~ 97 (119)
.++|+.+.+|+++... ++ ..+|++|+.+|..|+.||+++|+|+|+. |..+++..|+..+.+.|+++...
T Consensus 254 ~~~~v~~~g~~~~~~~-----l~--~~aD~~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~--- 323 (380)
T PRK13609 254 NPDALKVFGYVENIDE-----LF--RVTSCMITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIR--- 323 (380)
T ss_pred CCCcEEEEechhhHHH-----HH--HhccEEEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEEC---
Confidence 4568999999987643 77 7899999999999999999999999985 77778889999999999998754
Q ss_pred CCHHHHHHHHHHHhcCcccc
Q psy10598 98 FDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~~~~~~ 117 (119)
+.+++.++|.++++|++.+
T Consensus 324 -~~~~l~~~i~~ll~~~~~~ 342 (380)
T PRK13609 324 -DDEEVFAKTEALLQDDMKL 342 (380)
T ss_pred -CHHHHHHHHHHHHCCHHHH
Confidence 6889999999999886543
No 38
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.09 E-value=1.8e-10 Score=88.24 Aligned_cols=85 Identities=16% Similarity=0.330 Sum_probs=72.7
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCc-ccHHHHHHHHHHcCceeEecCCCC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLF-ADQKQNGQKAEEEGYGLMVDFDVF 98 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~-~dQ~~na~~~~~~G~g~~l~~~~~ 98 (119)
..++.+.+|+++... ++ ..+|++|+.+|.+|+.||+++|+|+|+.+.. +.+..|+..+.+.|.|+.+.
T Consensus 264 ~~~v~~~G~~~~~~~-----l~--~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~---- 332 (382)
T PLN02605 264 KIPVKVRGFVTNMEE-----WM--GACDCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFSE---- 332 (382)
T ss_pred cCCeEEEeccccHHH-----HH--HhCCEEEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeecC----
Confidence 357899999998775 77 8999999999999999999999999998654 54567999999999998763
Q ss_pred CHHHHHHHHHHHhcC-cc
Q psy10598 99 DYEELRRKVHQVLYE-PK 115 (119)
Q Consensus 99 ~~~~l~~~i~~~l~~-~~ 115 (119)
+++++.++|.+++.+ ++
T Consensus 333 ~~~~la~~i~~ll~~~~~ 350 (382)
T PLN02605 333 SPKEIARIVAEWFGDKSD 350 (382)
T ss_pred CHHHHHHHHHHHHcCCHH
Confidence 789999999999987 54
No 39
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.09 E-value=2.4e-10 Score=85.47 Aligned_cols=76 Identities=24% Similarity=0.341 Sum_probs=67.7
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCc---ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCccc
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLF---ADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~---~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
++ +.+|++|+++|.++++|++++|+|+|++|.. .+|..|++.+.+.+.|..+..++.++++|.+++.++++|+++
T Consensus 247 ~l--~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~ 324 (348)
T TIGR01133 247 AY--AAADLVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPAN 324 (348)
T ss_pred HH--HhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHH
Confidence 67 8999999999989999999999999999863 578889999999999999887777899999999999988765
Q ss_pred c
Q psy10598 117 V 117 (119)
Q Consensus 117 ~ 117 (119)
+
T Consensus 325 ~ 325 (348)
T TIGR01133 325 L 325 (348)
T ss_pred H
Confidence 4
No 40
>KOG3349|consensus
Probab=98.93 E-value=1.8e-09 Score=73.25 Aligned_cols=66 Identities=24% Similarity=0.304 Sum_probs=54.2
Q ss_pred EEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccC----cccHHHHHHHHHHcCceeEecC
Q psy10598 23 ILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPL----FADQKQNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 23 v~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~----~~dQ~~na~~~~~~G~g~~l~~ 95 (119)
+...+|-|...+ .+ ..+|++|+|+|+||++|.+..|+|.|+++- .++|.+-|..+++.|.=..-.+
T Consensus 65 id~y~f~psl~e-----~I--~~AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~p 134 (170)
T KOG3349|consen 65 IDGYDFSPSLTE-----DI--RSADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTP 134 (170)
T ss_pred EEEEecCccHHH-----HH--hhccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeec
Confidence 445566676432 55 679999999999999999999999999985 4899999999999997665443
No 41
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.92 E-value=6.3e-10 Score=82.47 Aligned_cols=57 Identities=21% Similarity=0.277 Sum_probs=51.8
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHH
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKA 84 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~ 84 (119)
.+|+.+..|.+++.. +| +.+|++||+|| +|++|+++.|+|+|++|...+|..||+.+
T Consensus 223 ~~~i~~~~~~~~m~~-----lm--~~aDl~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~~ 279 (279)
T TIGR03590 223 YPNIILFIDVENMAE-----LM--NEADLAIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQL 279 (279)
T ss_pred CCCEEEEeCHHHHHH-----HH--HHCCEEEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhhC
Confidence 458999999999864 78 89999999999 99999999999999999999999999853
No 42
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.84 E-value=5.9e-09 Score=80.79 Aligned_cols=84 Identities=18% Similarity=0.122 Sum_probs=67.3
Q ss_pred CEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHc----CceeEecCCC
Q psy10598 22 NILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE----GYGLMVDFDV 97 (119)
Q Consensus 22 nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~----G~g~~l~~~~ 97 (119)
++.+..|..++.. ++ ..+|++|+.+|..| .|++..|+|+|++|...+|. |+..+++. |.++.+..
T Consensus 280 ~~~v~~~~~~~~~-----~l--~~ADlvI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~-- 348 (396)
T TIGR03492 280 TLEVLLGRGAFAE-----IL--HWADLGIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLAS-- 348 (396)
T ss_pred ceEEEechHhHHH-----HH--HhCCEEEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCC--
Confidence 3566666655543 67 89999999999877 99999999999999888887 99887774 76766653
Q ss_pred CCHHHHHHHHHHHhcCccc
Q psy10598 98 FDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~~~~~ 116 (119)
.+.+.+.+++.++++|++.
T Consensus 349 ~~~~~l~~~l~~ll~d~~~ 367 (396)
T TIGR03492 349 KNPEQAAQVVRQLLADPEL 367 (396)
T ss_pred CCHHHHHHHHHHHHcCHHH
Confidence 3568999999999988654
No 43
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.53 E-value=3.3e-08 Score=76.24 Aligned_cols=72 Identities=14% Similarity=0.001 Sum_probs=64.1
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEc----cCcc---------cHHHHHHHHHHcCceeEecCCCCCHHHHHHH
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIV----PLFA---------DQKQNGQKAEEEGYGLMVDFDVFDYEELRRK 106 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~----P~~~---------dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~ 106 (119)
++ ..+|++|+.+|..|+ |++++|+|+|++ |+.. .|..|+..+++.++...+..++++++.|.+.
T Consensus 264 ~l--~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~ 340 (385)
T TIGR00215 264 AM--FAADAALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIA 340 (385)
T ss_pred HH--HhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHH
Confidence 66 789999999999988 999999999999 7641 3778999999999988777788999999999
Q ss_pred HHHHhcCc
Q psy10598 107 VHQVLYEP 114 (119)
Q Consensus 107 i~~~l~~~ 114 (119)
+.+++.|+
T Consensus 341 ~~~ll~~~ 348 (385)
T TIGR00215 341 LLLLLENG 348 (385)
T ss_pred HHHHhcCC
Confidence 99999887
No 44
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.28 E-value=4.3e-07 Score=68.98 Aligned_cols=76 Identities=13% Similarity=0.014 Sum_probs=54.0
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcc--------cHHHH-----HHHHHHcCceeEecCCCCCHHHHHHH
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFA--------DQKQN-----GQKAEEEGYGLMVDFDVFDYEELRRK 106 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~--------dQ~~n-----a~~~~~~G~g~~l~~~~~~~~~l~~~ 106 (119)
++ ..+|++|+.+|.+++ |++++|+|+|++|... +|..| ++.+++.+++..+.....+++++.++
T Consensus 258 ~~--~~aDl~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 334 (380)
T PRK00025 258 AM--AAADAALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARA 334 (380)
T ss_pred HH--HhCCEEEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHH
Confidence 66 899999999999888 9999999999995432 22222 22233333333344456789999999
Q ss_pred HHHHhcCccccc
Q psy10598 107 VHQVLYEPKYVG 118 (119)
Q Consensus 107 i~~~l~~~~~~~ 118 (119)
+.++++|++.++
T Consensus 335 i~~ll~~~~~~~ 346 (380)
T PRK00025 335 LLPLLADGARRQ 346 (380)
T ss_pred HHHHhcCHHHHH
Confidence 999999886553
No 45
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=98.27 E-value=5.2e-06 Score=55.77 Aligned_cols=66 Identities=23% Similarity=0.285 Sum_probs=52.8
Q ss_pred EEEEeec--cCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCc--------ccHHHHHHHHHHcCceeE
Q psy10598 23 ILVFGVF--PFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLF--------ADQKQNGQKAEEEGYGLM 92 (119)
Q Consensus 23 v~~~~~~--p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~--------~dQ~~na~~~~~~G~g~~ 92 (119)
.++.+|. +.... +. ..++++|+|+|.||++.++..++|.|++|.. .+|.+-|..+++.++=+.
T Consensus 48 l~v~~F~~~~kiQs-----li--~darIVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~ 120 (161)
T COG5017 48 LRVYGFDKEEKIQS-----LI--HDARIVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVA 120 (161)
T ss_pred cEEEeechHHHHHH-----Hh--hcceEEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEE
Confidence 4566653 43332 44 4677999999999999999999999999974 589999999999998777
Q ss_pred ecC
Q psy10598 93 VDF 95 (119)
Q Consensus 93 l~~ 95 (119)
..+
T Consensus 121 ~sp 123 (161)
T COG5017 121 CSP 123 (161)
T ss_pred EcC
Confidence 664
No 46
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.27 E-value=1.4e-06 Score=64.76 Aligned_cols=90 Identities=16% Similarity=0.173 Sum_probs=74.3
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFD 99 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~ 99 (119)
.+|+.+......+.. ++ ..||+.|+.|| .|++|++..|+|.+++|+...|...|+.++..|+...+... +.
T Consensus 209 ~~~i~~~~~~~dma~-----LM--ke~d~aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~-l~ 279 (318)
T COG3980 209 YPNINLYIDTNDMAE-----LM--KEADLAISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYH-LK 279 (318)
T ss_pred CCCeeeEecchhHHH-----HH--Hhcchheeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCC-Cc
Confidence 367888888887775 77 89999999998 68999999999999999999999999999999988776544 55
Q ss_pred HHHHHHHHHHHhcCccccc
Q psy10598 100 YEELRRKVHQVLYEPKYVG 118 (119)
Q Consensus 100 ~~~l~~~i~~~l~~~~~~~ 118 (119)
.......+.++.+|...|.
T Consensus 280 ~~~~~~~~~~i~~d~~~rk 298 (318)
T COG3980 280 DLAKDYEILQIQKDYARRK 298 (318)
T ss_pred hHHHHHHHHHhhhCHHHhh
Confidence 6666777777777766554
No 47
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.15 E-value=4.8e-06 Score=61.24 Aligned_cols=89 Identities=15% Similarity=0.177 Sum_probs=66.5
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
...+|+.+.+|+++.+. ..++ ..+|+++..+. .++++||+++|+|+|+.+..+ +...+++.+.|..+
T Consensus 244 ~~~~~v~~~g~~~~~~~---~~~~--~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~~~g~~~ 314 (364)
T cd03814 244 ARYPNVHFLGFLDGEEL---AAAY--ASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDGENGLLV 314 (364)
T ss_pred ccCCcEEEEeccCHHHH---HHHH--HhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCCcceEEc
Confidence 35678999999875430 1156 78999996654 488999999999999987654 44556667888887
Q ss_pred cCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
... +.+++.++|.+++.+++.+
T Consensus 315 ~~~--~~~~l~~~i~~l~~~~~~~ 336 (364)
T cd03814 315 EPG--DAEAFAAALAALLADPELR 336 (364)
T ss_pred CCC--CHHHHHHHHHHHHcCHHHH
Confidence 643 6788999999999887543
No 48
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.13 E-value=5.4e-06 Score=64.19 Aligned_cols=85 Identities=19% Similarity=0.235 Sum_probs=63.4
Q ss_pred CEEEEeeccCCccccccccccCCCeeEEEEc-----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCC
Q psy10598 22 NILVFGVFPFTSHFRKCYYIPHPKCRLFITH-----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFD 96 (119)
Q Consensus 22 nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h-----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~ 96 (119)
++.+.+...+... ++ ..+|+++.. +|..+++|++++|+|+|..|...++....+.+.+.|+++...
T Consensus 303 ~v~l~~~~~el~~-----~y--~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~-- 373 (425)
T PRK05749 303 DVLLGDTMGELGL-----LY--AIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVE-- 373 (425)
T ss_pred cEEEEecHHHHHH-----HH--HhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEEC--
Confidence 5666555444432 56 789985432 345568999999999999998888888878777778776654
Q ss_pred CCCHHHHHHHHHHHhcCcccc
Q psy10598 97 VFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 97 ~~~~~~l~~~i~~~l~~~~~~ 117 (119)
+.++|.+++.++++|++.+
T Consensus 374 --d~~~La~~l~~ll~~~~~~ 392 (425)
T PRK05749 374 --DAEDLAKAVTYLLTDPDAR 392 (425)
T ss_pred --CHHHHHHHHHHHhcCHHHH
Confidence 6899999999999887544
No 49
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.01 E-value=4e-06 Score=56.74 Aligned_cols=87 Identities=21% Similarity=0.322 Sum_probs=65.7
Q ss_pred CCCCCEEEEeecc--CCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCcee
Q psy10598 18 CHGYNILVFGVFP--FTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGL 91 (119)
Q Consensus 18 ~l~~nv~~~~~~p--~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~ 91 (119)
.+++++.+.++.+ +... ++ ..++++++. |...++.||+++|+|+|+.. ...+...+.+.+.|.
T Consensus 70 ~~~~~i~~~~~~~~~~l~~-----~~--~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~~~g~ 138 (172)
T PF00534_consen 70 NLKENIIFLGYVPDDELDE-----LY--KSSDIFVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDGVNGF 138 (172)
T ss_dssp TCGTTEEEEESHSHHHHHH-----HH--HHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTTTSEE
T ss_pred ccccccccccccccccccc-----cc--ccceeccccccccccccccccccccccceeecc----ccCCceeeccccceE
Confidence 4678999999998 3332 66 678998876 56689999999999999843 445556677777898
Q ss_pred EecCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 92 MVDFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 92 ~l~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
.++.. +.+++.++|.+++.+++++
T Consensus 139 ~~~~~--~~~~l~~~i~~~l~~~~~~ 162 (172)
T PF00534_consen 139 LFDPN--DIEELADAIEKLLNDPELR 162 (172)
T ss_dssp EESTT--SHHHHHHHHHHHHHHHHHH
T ss_pred EeCCC--CHHHHHHHHHHHHCCHHHH
Confidence 88755 8899999999999887544
No 50
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.97 E-value=1e-05 Score=60.48 Aligned_cols=86 Identities=21% Similarity=0.283 Sum_probs=64.2
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEc----------CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcC
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----------GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEG 88 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----------gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G 88 (119)
+++++.+.+++|..+. ..++ ..+|++|.- |-.+++.||+++|+|+|..+..+ +.+.+.+.+
T Consensus 243 ~~~~v~~~g~~~~~~l---~~~~--~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~~ 313 (367)
T cd05844 243 LGGRVTFLGAQPHAEV---RELM--RRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDGE 313 (367)
T ss_pred CCCeEEECCCCCHHHH---HHHH--HhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecCC
Confidence 5678999999875430 0156 778888742 23589999999999999976643 556666777
Q ss_pred ceeEecCCCCCHHHHHHHHHHHhcCcc
Q psy10598 89 YGLMVDFDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 89 ~g~~l~~~~~~~~~l~~~i~~~l~~~~ 115 (119)
.|..++.. +.+++.++|.+++++++
T Consensus 314 ~g~~~~~~--d~~~l~~~i~~l~~~~~ 338 (367)
T cd05844 314 TGLLVPEG--DVAALAAALGRLLADPD 338 (367)
T ss_pred eeEEECCC--CHHHHHHHHHHHHcCHH
Confidence 88887643 67899999999998765
No 51
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.95 E-value=1.3e-05 Score=58.06 Aligned_cols=88 Identities=19% Similarity=0.254 Sum_probs=64.6
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEE----cCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFIT----HGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~----hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
..++|+.+.++++..+. ..++ ..+|++|. -|..++++||+++|+|+|+.+. ......+.+.+.|..+
T Consensus 253 ~~~~~v~~~g~~~~~~~---~~~~--~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~~~g~~~ 323 (374)
T cd03801 253 GLGDRVTFLGFVPDEDL---PALY--AAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDGETGLLV 323 (374)
T ss_pred CCCcceEEEeccChhhH---HHHH--HhcCEEEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCCcceEEe
Confidence 36789999999964330 1156 67888884 3456899999999999999765 2344555556778877
Q ss_pred cCCCCCHHHHHHHHHHHhcCccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
+.. +++++.+++.+++.+++.
T Consensus 324 ~~~--~~~~l~~~i~~~~~~~~~ 344 (374)
T cd03801 324 PPG--DPEALAEAILRLLDDPEL 344 (374)
T ss_pred CCC--CHHHHHHHHHHHHcChHH
Confidence 653 589999999999887654
No 52
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.92 E-value=2.2e-05 Score=58.05 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=62.7
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEE-----cCC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCcee
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFIT-----HGG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGL 91 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~-----hgG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~ 91 (119)
...+||.+.+|+|+.+. ..++ ..+|+++. +.| ..++.||+++|+|+|+....+....... ..+.|.
T Consensus 241 ~~~~~V~~~g~v~~~~~---~~~~--~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~~~g~ 312 (357)
T cd03795 241 GLLDRVRFLGRLDDEEK---AALL--AACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HGVTGL 312 (357)
T ss_pred CCcceEEEcCCCCHHHH---HHHH--HhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CCCceE
Confidence 45679999999996420 1155 67888772 223 4689999999999999765544432222 256787
Q ss_pred EecCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 92 MVDFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 92 ~l~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
..+.+ +.+++.++|.+++++++.+
T Consensus 313 ~~~~~--d~~~~~~~i~~l~~~~~~~ 336 (357)
T cd03795 313 VVPPG--DPAALAEAIRRLLEDPELR 336 (357)
T ss_pred EeCCC--CHHHHHHHHHHHHHCHHHH
Confidence 77643 6899999999999887543
No 53
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.91 E-value=3.2e-05 Score=58.16 Aligned_cols=85 Identities=16% Similarity=0.226 Sum_probs=60.6
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFD 99 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~ 99 (119)
.+|+.+.++.+..+. ..++ ..||++|+..| +.+.|+++.|+|+|.++.. |. +..+.+.|+++.+.. +
T Consensus 257 ~~~v~~~~~~~~~~~---~~l~--~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~g~~~~~~~---~ 323 (363)
T cd03786 257 HPNVLLISPLGYLYF---LLLL--KNADLVLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVESGTNVLVGT---D 323 (363)
T ss_pred CCCEEEECCcCHHHH---HHHH--HcCcEEEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhheeeEEecCC---C
Confidence 467887765543220 0145 78999999998 7788999999999998643 22 345566787766642 5
Q ss_pred HHHHHHHHHHHhcCcccc
Q psy10598 100 YEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 100 ~~~l~~~i~~~l~~~~~~ 117 (119)
.+++.+++.++++++..+
T Consensus 324 ~~~i~~~i~~ll~~~~~~ 341 (363)
T cd03786 324 PEAILAAIEKLLSDEFAY 341 (363)
T ss_pred HHHHHHHHHHHhcCchhh
Confidence 889999999999876543
No 54
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.91 E-value=2.6e-05 Score=59.16 Aligned_cols=86 Identities=14% Similarity=0.230 Sum_probs=60.6
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCC
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVF 98 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~ 98 (119)
..+|+.+.+.++..+. -+++ ..++++|+-.|.. +.||+++|+|+|.++..+++.+ +.+.|.+..+. .
T Consensus 253 ~~~~v~~~~~~~~~~~---~~~l--~~ad~vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e----~~~~g~~~lv~---~ 319 (365)
T TIGR00236 253 DSKRVHLIEPLEYLDF---LNLA--ANSHLILTDSGGV-QEEAPSLGKPVLVLRDTTERPE----TVEAGTNKLVG---T 319 (365)
T ss_pred CCCCEEEECCCChHHH---HHHH--HhCCEEEECChhH-HHHHHHcCCCEEECCCCCCChH----HHhcCceEEeC---C
Confidence 3468888876665321 0145 7899999977644 6999999999999865544432 33457776664 2
Q ss_pred CHHHHHHHHHHHhcCcccc
Q psy10598 99 DYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 99 ~~~~l~~~i~~~l~~~~~~ 117 (119)
+++++.+++.+++++++.+
T Consensus 320 d~~~i~~ai~~ll~~~~~~ 338 (365)
T TIGR00236 320 DKENITKAAKRLLTDPDEY 338 (365)
T ss_pred CHHHHHHHHHHHHhChHHH
Confidence 7899999999999877543
No 55
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.88 E-value=3.4e-05 Score=56.55 Aligned_cols=87 Identities=13% Similarity=0.197 Sum_probs=62.8
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEc-----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH-----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h-----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
..+|+.+.+|+++.+. ..++ .++|++|.. |...++.||+++|+|+|+.+.. ...+.+.+.+.|..+
T Consensus 241 ~~~~v~~~g~~~~~~~---~~~~--~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~ 311 (359)
T cd03823 241 GDPRVEFLGAYPQEEI---DDFY--AEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDGVNGLLF 311 (359)
T ss_pred CCCeEEEeCCCCHHHH---HHHH--HhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCCCcEEEE
Confidence 3578999999964320 0156 788888842 3346899999999999997653 344556666678887
Q ss_pred cCCCCCHHHHHHHHHHHhcCccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
... +.+++.+++.+++++++.
T Consensus 312 ~~~--d~~~l~~~i~~l~~~~~~ 332 (359)
T cd03823 312 PPG--DAEDLAAALERLIDDPDL 332 (359)
T ss_pred CCC--CHHHHHHHHHHHHhChHH
Confidence 754 588999999999987643
No 56
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.87 E-value=3.9e-05 Score=55.78 Aligned_cols=85 Identities=12% Similarity=0.177 Sum_probs=62.4
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
...++.+.++..+... ++ ..+|++|.... .++++||+++|+|+|+.+..+ ....+.+.+.|..++
T Consensus 244 ~~~~v~~~g~~~~~~~-----~~--~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~~~g~~~~ 312 (359)
T cd03808 244 LEGRVEFLGFRDDVPE-----LL--AAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDGVNGFLVP 312 (359)
T ss_pred CcceEEEeeccccHHH-----HH--HhccEEEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcCcceEEEC
Confidence 3468888888655443 66 78899886443 589999999999999976543 334555567788776
Q ss_pred CCCCCHHHHHHHHHHHhcCccc
Q psy10598 95 FDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
.+ +.+++.+++.+++.+++.
T Consensus 313 ~~--~~~~~~~~i~~l~~~~~~ 332 (359)
T cd03808 313 PG--DAEALADAIERLIEDPEL 332 (359)
T ss_pred CC--CHHHHHHHHHHHHhCHHH
Confidence 43 688999999998877643
No 57
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.85 E-value=3.1e-05 Score=58.27 Aligned_cols=87 Identities=17% Similarity=0.135 Sum_probs=63.9
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
+.+|+.+.+|+|+.+. ..++ ..+|+++.. |-..++.||+++|+|+|+.+..+ ..+.+++.+.|..++
T Consensus 281 ~~~~v~~~g~~~~~~~---~~~~--~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~~~g~~~~ 351 (398)
T cd03800 281 VIDRVDFPGRVSREDL---PALY--RAADVFVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDGVTGLLVD 351 (398)
T ss_pred CCceEEEeccCCHHHH---HHHH--HhCCEEEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCCCCeEEeC
Confidence 4578999999986540 0146 679998854 22478999999999999876533 445566667888876
Q ss_pred CCCCCHHHHHHHHHHHhcCccc
Q psy10598 95 FDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
.. +.+++.++|.+++++++.
T Consensus 352 ~~--~~~~l~~~i~~l~~~~~~ 371 (398)
T cd03800 352 PR--DPEALAAALRRLLTDPAL 371 (398)
T ss_pred CC--CHHHHHHHHHHHHhCHHH
Confidence 54 689999999999987643
No 58
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.83 E-value=3.9e-05 Score=55.54 Aligned_cols=86 Identities=16% Similarity=0.287 Sum_probs=61.0
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcC-ceeEe
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEG-YGLMV 93 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G-~g~~l 93 (119)
++.++.+.++.+.... ++ ..+|++|.-.. .++++||+++|+|+|+.+..+.+. .+.+.+ .|..+
T Consensus 233 ~~~~v~~~g~~~~~~~-----~~--~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~~~~g~~~ 301 (348)
T cd03820 233 LEDRVILLGFTKNIEE-----YY--AKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIEDGVNGLLV 301 (348)
T ss_pred CCCeEEEcCCcchHHH-----HH--HhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhccCcceEEe
Confidence 4567888887444332 66 67888886542 578999999999999876544332 233344 78777
Q ss_pred cCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
+.. +.+++.++|.+++++++.+
T Consensus 302 ~~~--~~~~~~~~i~~ll~~~~~~ 323 (348)
T cd03820 302 PNG--DVEALAEALLRLMEDEELR 323 (348)
T ss_pred CCC--CHHHHHHHHHHHHcCHHHH
Confidence 643 5789999999999887654
No 59
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.82 E-value=4.2e-05 Score=56.79 Aligned_cols=87 Identities=9% Similarity=0.063 Sum_probs=62.1
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
.+++++.+.++..+... ++ ..+|++|.- |-..+++||+++|+|+|+....+ ....+.+ +.+...
T Consensus 246 ~~~~~v~~~g~~~~~~~-----~~--~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~-~~~~~~ 313 (358)
T cd03812 246 GLEDKVIFLGVRNDVPE-----LL--QAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD-LVKFLS 313 (358)
T ss_pred CCCCcEEEecccCCHHH-----HH--HhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc-CccEEe
Confidence 45688999998555443 66 788888854 34689999999999999965543 2233444 455554
Q ss_pred cCCCCCHHHHHHHHHHHhcCccccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKYVG 118 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~~~ 118 (119)
... ++++++++|.+++.+++.++
T Consensus 314 ~~~--~~~~~a~~i~~l~~~~~~~~ 336 (358)
T cd03812 314 LDE--SPEIWAEEILKLKSEDRRER 336 (358)
T ss_pred CCC--CHHHHHHHHHHHHhCcchhh
Confidence 322 57999999999999987654
No 60
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=97.70 E-value=0.00014 Score=52.93 Aligned_cols=87 Identities=18% Similarity=0.233 Sum_probs=63.3
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEE----cCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFIT----HGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~----hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
.+.+|+.+.+++++.+. ..++ .++|+++. -|..+++.||+++|+|+|+-+..+ ....+.+.+.|..+
T Consensus 256 ~~~~~v~~~g~~~~~~~---~~~~--~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~~~g~~~ 326 (377)
T cd03798 256 GLEDRVTFLGAVPHEEV---PAYY--AAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDGENGLLV 326 (377)
T ss_pred CCcceEEEeCCCCHHHH---HHHH--HhcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCCcceeEE
Confidence 35679999999986430 0056 67888873 345688999999999999876543 34456666667777
Q ss_pred cCCCCCHHHHHHHHHHHhcCcc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~ 115 (119)
+.. +.+++.+++.++++++.
T Consensus 327 ~~~--~~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 327 PPG--DPEALAEAILRLLADPW 346 (377)
T ss_pred CCC--CHHHHHHHHHHHhcCcH
Confidence 643 78899999999998765
No 61
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.70 E-value=5.9e-05 Score=55.40 Aligned_cols=87 Identities=20% Similarity=0.166 Sum_probs=61.1
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCC---------hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCce
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG---------VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYG 90 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG---------~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g 90 (119)
.+|+.+.+++++.+. ..++ ..+|++|.... .+++.||+++|+|+|+.+..+.+.. +.+.+.|
T Consensus 274 ~~~v~~~g~~~~~~~---~~~~--~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~~~~g 344 (394)
T cd03794 274 LDNVTFLGRVPKEEL---PELL--AAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEEAGAG 344 (394)
T ss_pred CCcEEEeCCCChHHH---HHHH--HhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hccCCcc
Confidence 468999998875430 0155 67888884322 3458999999999999877654432 3333677
Q ss_pred eEecCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 91 LMVDFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 91 ~~l~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
..++.. +.+++.++|.+++.|++.+
T Consensus 345 ~~~~~~--~~~~l~~~i~~~~~~~~~~ 369 (394)
T cd03794 345 LVVPPG--DPEALAAAILELLDDPEER 369 (394)
T ss_pred eEeCCC--CHHHHHHHHHHHHhChHHH
Confidence 777644 6889999999999776543
No 62
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.69 E-value=0.00011 Score=57.45 Aligned_cols=88 Identities=16% Similarity=0.218 Sum_probs=67.3
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeE------EEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCcee
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRL------FITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGL 91 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~------~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~ 91 (119)
....+|.+.+-+-.+.. ++ .-+|+ ++.+||+|-+ |++++|+|+|.-|+...|.+-++.+.+.|+++
T Consensus 297 ~~~tdV~l~DtmGEL~l-----~y--~~adiAFVGGSlv~~GGHN~L-Epa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~ 368 (419)
T COG1519 297 FSDTDVLLGDTMGELGL-----LY--GIADIAFVGGSLVPIGGHNPL-EPAAFGTPVIFGPYTFNFSDIAERLLQAGAGL 368 (419)
T ss_pred CCCCcEEEEecHhHHHH-----HH--hhccEEEECCcccCCCCCChh-hHHHcCCCEEeCCccccHHHHHHHHHhcCCeE
Confidence 33457777776554431 33 55555 3468898765 99999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 92 MVDFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 92 ~l~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
.++ +.+.|.+++..++.|++.+
T Consensus 369 ~v~----~~~~l~~~v~~l~~~~~~r 390 (419)
T COG1519 369 QVE----DADLLAKAVELLLADEDKR 390 (419)
T ss_pred EEC----CHHHHHHHHHHhcCCHHHH
Confidence 998 4677888888777765543
No 63
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.69 E-value=8.3e-05 Score=57.72 Aligned_cols=88 Identities=14% Similarity=0.146 Sum_probs=63.6
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEc---------CCh-hHHHHHHHhCCCEEEccCcccHHHHHHHHHHc
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH---------GGV-HSAFESIYHAVPMVIVPLFADQKQNGQKAEEE 87 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h---------gG~-~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~ 87 (119)
.+.++|.+.+|+|+.+. ..++ ..+|++|.- -|. .+++||+++|+|+|.....+ ..+.+++.
T Consensus 276 ~l~~~V~~~G~~~~~el---~~~l--~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~ 346 (406)
T PRK15427 276 QLEDVVEMPGFKPSHEV---KAML--DDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEAD 346 (406)
T ss_pred CCCCeEEEeCCCCHHHH---HHHH--HhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCC
Confidence 35678999999986530 0156 788988852 243 77999999999999975432 33445555
Q ss_pred CceeEecCCCCCHHHHHHHHHHHhc-Cccc
Q psy10598 88 GYGLMVDFDVFDYEELRRKVHQVLY-EPKY 116 (119)
Q Consensus 88 G~g~~l~~~~~~~~~l~~~i~~~l~-~~~~ 116 (119)
..|..++.. +.+++.++|.++++ |++.
T Consensus 347 ~~G~lv~~~--d~~~la~ai~~l~~~d~~~ 374 (406)
T PRK15427 347 KSGWLVPEN--DAQALAQRLAAFSQLDTDE 374 (406)
T ss_pred CceEEeCCC--CHHHHHHHHHHHHhCCHHH
Confidence 678887654 68999999999998 7653
No 64
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.67 E-value=7.2e-05 Score=55.98 Aligned_cols=85 Identities=18% Similarity=0.206 Sum_probs=62.3
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
+.+++.+.++.++... ++ ..+|++|.- |...++.||+++|+|+|+.+.. ...+.+.+...|..++
T Consensus 251 ~~~~v~~~g~~~~~~~-----~~--~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~~~G~~~~ 319 (371)
T cd04962 251 LQDDVLFLGKQDHVEE-----LL--SIADLFLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHGETGFLVD 319 (371)
T ss_pred CCceEEEecCcccHHH-----HH--HhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCCCceEEcC
Confidence 4578999998776553 67 788998833 3357999999999999996543 2445555556787766
Q ss_pred CCCCCHHHHHHHHHHHhcCccc
Q psy10598 95 FDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
.. +.+++.+++.+++++++.
T Consensus 320 ~~--~~~~l~~~i~~l~~~~~~ 339 (371)
T cd04962 320 VG--DVEAMAEYALSLLEDDEL 339 (371)
T ss_pred CC--CHHHHHHHHHHHHhCHHH
Confidence 43 678899999999877643
No 65
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.67 E-value=0.00016 Score=54.85 Aligned_cols=89 Identities=11% Similarity=0.047 Sum_probs=61.8
Q ss_pred CCCCCEEEEeeccCCccccc-cccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEcc-CcccHHHHHHHHHHcCcee
Q psy10598 18 CHGYNILVFGVFPFTSHFRK-CYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVP-LFADQKQNGQKAEEEGYGL 91 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~-~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P-~~~dQ~~na~~~~~~G~g~ 91 (119)
.+++||.+.+|.++... . ...+ ..+|++|.. |-..++.||+++|+|+|+.. ..+ ..+.+++...|.
T Consensus 233 ~l~~~v~f~G~~~~~~~--~~~~~~--~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~~~G~ 304 (359)
T PRK09922 233 GIEQRIIWHGWQSQPWE--VVQQKI--KNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPGLNGE 304 (359)
T ss_pred CCCCeEEEecccCCcHH--HHHHHH--hcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCCCceE
Confidence 46789999999865311 0 0023 457888753 32589999999999999874 322 223455555787
Q ss_pred EecCCCCCHHHHHHHHHHHhcCccc
Q psy10598 92 MVDFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 92 ~l~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
.++.. +.+++.++|.+++++++.
T Consensus 305 lv~~~--d~~~la~~i~~l~~~~~~ 327 (359)
T PRK09922 305 LYTPG--NIDEFVGKLNKVISGEVK 327 (359)
T ss_pred EECCC--CHHHHHHHHHHHHhCccc
Confidence 77643 789999999999988864
No 66
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.66 E-value=5.3e-05 Score=55.57 Aligned_cols=87 Identities=15% Similarity=0.164 Sum_probs=62.5
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
.+.+|+.+.+++|+.+. ..++ ..+|+++.. +...++.||+++|+|+|+.+.. ..+..+.+.+.|..+
T Consensus 256 ~~~~~v~~~g~~~~~~~---~~~~--~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~~~~g~~~ 326 (374)
T cd03817 256 GLADRVIFTGFVPREEL---PDYY--KAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVADGENGFLF 326 (374)
T ss_pred CCCCcEEEeccCChHHH---HHHH--HHcCEEEecccccCcChHHHHHHHcCCcEEEeCCC----ChhhheecCceeEEe
Confidence 45689999999986530 1145 678888844 3347899999999999997543 244556666778888
Q ss_pred cCCCCCHHHHHHHHHHHhcCccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
+..+ . ++.+++.+++++++.
T Consensus 327 ~~~~--~-~~~~~i~~l~~~~~~ 346 (374)
T cd03817 327 PPGD--E-ALAEALLRLLQDPEL 346 (374)
T ss_pred CCCC--H-HHHHHHHHHHhChHH
Confidence 7543 2 899999999987653
No 67
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.63 E-value=6e-05 Score=55.22 Aligned_cols=85 Identities=18% Similarity=0.160 Sum_probs=59.9
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEcC----ChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHG----GVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hg----G~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
.+++|+.+.+|+++.+. ..++ ..+|++|.-. -..++.||+++|+|+|+.+..+ ....+.. +.|...
T Consensus 259 ~~~~~v~~~g~~~~~~~---~~~~--~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~-~~~~~~ 328 (375)
T cd03821 259 GLEDRVTFTGMLYGEDK---AAAL--ADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY-GCGWVV 328 (375)
T ss_pred CccceEEEcCCCChHHH---HHHH--hhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc-CceEEe
Confidence 35689999999985430 0146 6788887533 2578999999999999976433 2333444 777776
Q ss_pred cCCCCCHHHHHHHHHHHhcCcc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~ 115 (119)
.. +.+++.++|.+++++++
T Consensus 329 ~~---~~~~~~~~i~~l~~~~~ 347 (375)
T cd03821 329 DD---DVDALAAALRRALELPQ 347 (375)
T ss_pred CC---ChHHHHHHHHHHHhCHH
Confidence 54 45889999999998754
No 68
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.62 E-value=0.00011 Score=53.65 Aligned_cols=83 Identities=16% Similarity=0.237 Sum_probs=58.2
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
.+++++.+.+..+.... ++ ..+|+++.... .+++.||+++|+|+|+....+ +...+.+ .|..+
T Consensus 248 ~~~~~v~~~g~~~~~~~-----~~--~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~----~~e~~~~--~g~~~ 314 (365)
T cd03807 248 GLEDKVILLGERSDVPA-----LL--NALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGD----NAELVGD--TGFLV 314 (365)
T ss_pred CCCceEEEccccccHHH-----HH--HhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCC----hHHHhhc--CCEEe
Confidence 34567777776555432 66 78899886544 489999999999999965432 3344444 55566
Q ss_pred cCCCCCHHHHHHHHHHHhcCcc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~ 115 (119)
..+ +.+++.+++.+++++++
T Consensus 315 ~~~--~~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 315 PPG--DPEALAEAIEALLADPA 334 (365)
T ss_pred CCC--CHHHHHHHHHHHHhChH
Confidence 543 68899999999998754
No 69
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.59 E-value=0.00011 Score=56.87 Aligned_cols=90 Identities=11% Similarity=0.148 Sum_probs=62.0
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~ 95 (119)
.++|.+.+|+++.+. ..++....+++++...- ..+++||+++|+|+|+....+ ..+.+.+.+.|..+..
T Consensus 288 ~~~V~f~G~v~~~e~---~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~~~G~l~~~ 360 (407)
T cd04946 288 NISVNFTGELSNSEV---YKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNGGNGLLLSK 360 (407)
T ss_pred CceEEEecCCChHHH---HHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCCCcEEEeCC
Confidence 467999999987540 00443345777774432 478999999999999865432 3455555557887764
Q ss_pred CCCCHHHHHHHHHHHhcCcccc
Q psy10598 96 DVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 96 ~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
.-+.+++.++|.++++|++.+
T Consensus 361 -~~~~~~la~~I~~ll~~~~~~ 381 (407)
T cd04946 361 -DPTPNELVSSLSKFIDNEEEY 381 (407)
T ss_pred -CCCHHHHHHHHHHHHhCHHHH
Confidence 336899999999999876543
No 70
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.59 E-value=9.6e-05 Score=56.70 Aligned_cols=82 Identities=20% Similarity=0.260 Sum_probs=59.2
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEE--Ec--CCh-hHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFI--TH--GGV-HSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I--~h--gG~-~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
.+||.+.+++++... ++ ..+|++| ++ .|. +.+.||+++|+|+|+.+...+.. ....|.|..+.
T Consensus 279 ~~~V~~~G~v~~~~~-----~~--~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv~ 346 (397)
T TIGR03087 279 LPGVTVTGSVADVRP-----YL--AHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLVA 346 (397)
T ss_pred CCCeEEeeecCCHHH-----HH--HhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEeC
Confidence 468999999987553 66 6788887 32 343 57999999999999987532211 12345676664
Q ss_pred CCCCCHHHHHHHHHHHhcCccc
Q psy10598 95 FDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
-+.+++.++|.++++|++.
T Consensus 347 ---~~~~~la~ai~~ll~~~~~ 365 (397)
T TIGR03087 347 ---ADPADFAAAILALLANPAE 365 (397)
T ss_pred ---CCHHHHHHHHHHHHcCHHH
Confidence 2789999999999988654
No 71
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.57 E-value=9.9e-05 Score=54.54 Aligned_cols=86 Identities=17% Similarity=0.237 Sum_probs=61.6
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEE----------cCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcC
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFIT----------HGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEG 88 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~----------hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G 88 (119)
+++|+.+.+++|..+. ..++ .++|+++. -|..++++|++++|+|+|+.+..+ ....+.+..
T Consensus 234 ~~~~v~~~g~~~~~~l---~~~~--~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~ 304 (355)
T cd03799 234 LEDRVTLLGAKSQEEV---RELL--RAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDGE 304 (355)
T ss_pred CCCeEEECCcCChHHH---HHHH--HhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCCC
Confidence 5689999999974320 1155 67888876 344589999999999999976532 223444444
Q ss_pred ceeEecCCCCCHHHHHHHHHHHhcCcc
Q psy10598 89 YGLMVDFDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 89 ~g~~l~~~~~~~~~l~~~i~~~l~~~~ 115 (119)
.|..+..+ +.+++.++|.++++++.
T Consensus 305 ~g~~~~~~--~~~~l~~~i~~~~~~~~ 329 (355)
T cd03799 305 TGLLVPPG--DPEALADAIERLLDDPE 329 (355)
T ss_pred ceEEeCCC--CHHHHHHHHHHHHhCHH
Confidence 78777643 68899999999988764
No 72
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.54 E-value=0.00011 Score=55.06 Aligned_cols=86 Identities=13% Similarity=0.095 Sum_probs=61.6
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEc--CC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH--GG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h--gG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
..++||.+.+++|+.+. ..++ ..+|+++.- -| ..++.||+++|+|+|.....+ ..+.+.+...|..++
T Consensus 239 ~~~~~V~~~g~~~~~~~---~~~~--~~ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~~~G~~~~ 309 (351)
T cd03804 239 KAGPNVTFLGRVSDEEL---RDLY--ARARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDGVTGILFE 309 (351)
T ss_pred hcCCCEEEecCCCHHHH---HHHH--HhCCEEEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCCCCEEEeC
Confidence 35689999999987320 0056 678887742 23 356789999999999975433 233455556788876
Q ss_pred CCCCCHHHHHHHHHHHhcCc
Q psy10598 95 FDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~ 114 (119)
.+ +.+++.++|.++++++
T Consensus 310 ~~--~~~~la~~i~~l~~~~ 327 (351)
T cd03804 310 EQ--TVESLAAAVERFEKNE 327 (351)
T ss_pred CC--CHHHHHHHHHHHHhCc
Confidence 54 6888999999999876
No 73
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.53 E-value=0.0002 Score=54.96 Aligned_cols=89 Identities=15% Similarity=0.152 Sum_probs=61.4
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEc----CC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeE
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLM 92 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~ 92 (119)
.++.++.+.+++|..+. ..++ ..+|++|.. .| ..+++||+++|+|+|+.... .+.+.+.+...|..
T Consensus 254 ~l~~~v~~~G~~~~~~l---~~~~--~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~~~~G~~ 324 (380)
T PRK15484 254 RIGDRCIMLGGQPPEKM---HNYY--PLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLEGITGYH 324 (380)
T ss_pred hcCCcEEEeCCCCHHHH---HHHH--HhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhcccCCceEE
Confidence 34678889999874320 0156 788998853 33 26889999999999997653 23445555567764
Q ss_pred ecCCCCCHHHHHHHHHHHhcCccc
Q psy10598 93 VDFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 93 l~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
+.. ..+.+++.++|.++++|++.
T Consensus 325 l~~-~~d~~~la~~I~~ll~d~~~ 347 (380)
T PRK15484 325 LAE-PMTSDSIISDINRTLADPEL 347 (380)
T ss_pred EeC-CCCHHHHHHHHHHHHcCHHH
Confidence 421 23689999999999988753
No 74
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.53 E-value=0.0002 Score=54.05 Aligned_cols=84 Identities=15% Similarity=0.190 Sum_probs=59.6
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
+.+++.+.++..+... ++ ..+|++|.- |-..+++||+++|+|+|+....+ +.+.+++...|..++
T Consensus 253 ~~~~v~~~g~~~~~~~-----~~--~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~~~g~~~~ 321 (374)
T TIGR03088 253 LAHLVWLPGERDDVPA-----LM--QALDLFVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHGVTGALVP 321 (374)
T ss_pred CcceEEEcCCcCCHHH-----HH--HhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCCCceEEeC
Confidence 4456777665544432 67 788998832 33589999999999999976533 344555556687776
Q ss_pred CCCCCHHHHHHHHHHHhcCcc
Q psy10598 95 FDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~~ 115 (119)
.. +.+++.+++.+++++++
T Consensus 322 ~~--d~~~la~~i~~l~~~~~ 340 (374)
T TIGR03088 322 PG--DAVALARALQPYVSDPA 340 (374)
T ss_pred CC--CHHHHHHHHHHHHhCHH
Confidence 43 68899999999987764
No 75
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.52 E-value=0.00014 Score=55.49 Aligned_cols=88 Identities=14% Similarity=0.064 Sum_probs=62.1
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
++.+|+.+.+++|..+. ..++ ..+|+++.- |...+++||+++|+|+|+....+ ....+.+...|..+
T Consensus 280 ~l~~~v~~~g~~~~~~~---~~~l--~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~~~g~~~ 350 (405)
T TIGR03449 280 GIADRVRFLPPRPPEEL---VHVY--RAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADGETGLLV 350 (405)
T ss_pred CCCceEEECCCCCHHHH---HHHH--HhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccCCceEEC
Confidence 34578999999875420 1156 788888742 33468999999999999975532 23345555678877
Q ss_pred cCCCCCHHHHHHHHHHHhcCccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
+.. +.+++.++|.+++++++.
T Consensus 351 ~~~--d~~~la~~i~~~l~~~~~ 371 (405)
T TIGR03449 351 DGH--DPADWADALARLLDDPRT 371 (405)
T ss_pred CCC--CHHHHHHHHHHHHhCHHH
Confidence 643 688999999999987653
No 76
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.50 E-value=0.00024 Score=51.33 Aligned_cols=85 Identities=19% Similarity=0.254 Sum_probs=59.5
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
.+.+++.+.++.+.... ++ ..+|++|.- |..+++.||+++|+|+|+.... ...+.+.+.+.|...
T Consensus 243 ~~~~~v~~~g~~~~~~~-----~~--~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~~~g~~~ 311 (353)
T cd03811 243 GLADRVHFLGFQSNPYP-----YL--KAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDGENGLLV 311 (353)
T ss_pred CCCccEEEecccCCHHH-----HH--HhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCCCceEEE
Confidence 34678999998776543 66 678888843 3357899999999999986543 445667777788887
Q ss_pred cCCCCCHHHH---HHHHHHHhcCcc
Q psy10598 94 DFDVFDYEEL---RRKVHQVLYEPK 115 (119)
Q Consensus 94 ~~~~~~~~~l---~~~i~~~l~~~~ 115 (119)
+.. +.+.+ .+.+.+...+++
T Consensus 312 ~~~--~~~~~~~~~~~i~~~~~~~~ 334 (353)
T cd03811 312 PVG--DEAALAAAALALLDLLLDPE 334 (353)
T ss_pred CCC--CHHHHHHHHHHHHhccCChH
Confidence 654 56666 555555555543
No 77
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.48 E-value=8.9e-05 Score=54.89 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=56.2
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
.+.+|+.+.++..+... ++ ..+|+++.-.. .+++.||+++|+|+|+... ......+++. |..+
T Consensus 242 ~~~~~v~~~g~~~~~~~-----~~--~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~--g~~~ 308 (360)
T cd04951 242 GLSNRVKLLGLRDDIAA-----YY--NAADLFVLSSAWEGFGLVVAEAMACELPVVATDA----GGVREVVGDS--GLIV 308 (360)
T ss_pred CCCCcEEEecccccHHH-----HH--HhhceEEecccccCCChHHHHHHHcCCCEEEecC----CChhhEecCC--ceEe
Confidence 35678999998766543 67 77888886432 5789999999999998543 2344445443 4444
Q ss_pred cCCCCCHHHHHHHHHHHhc
Q psy10598 94 DFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~ 112 (119)
.. -+.+++.+++.++++
T Consensus 309 ~~--~~~~~~~~~i~~ll~ 325 (360)
T cd04951 309 PI--SDPEALANKIDEILK 325 (360)
T ss_pred CC--CCHHHHHHHHHHHHh
Confidence 43 278899999999984
No 78
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.47 E-value=0.00012 Score=54.31 Aligned_cols=87 Identities=14% Similarity=0.190 Sum_probs=59.6
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcC----ChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHG----GVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hg----G~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
+..++.+.+|++.... -..++ ..+|+++... ...+++||+++|+|+|+....+ ....+.+.+.|..++
T Consensus 242 ~~~~v~~~g~~~~~~~--~~~~~--~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~~~g~~~~ 313 (365)
T cd03825 242 LPFPVHYLGSLNDDES--LALIY--SAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHGVTGYLAK 313 (365)
T ss_pred CCCceEecCCcCCHHH--HHHHH--HhCCEEEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCCCceEEeC
Confidence 5668889999883210 00056 7889998753 3589999999999999865432 122333445677665
Q ss_pred CCCCCHHHHHHHHHHHhcCcc
Q psy10598 95 FDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~~ 115 (119)
.. +.+++.+++.+++++++
T Consensus 314 ~~--~~~~~~~~l~~l~~~~~ 332 (365)
T cd03825 314 PG--DPEDLAEGIEWLLADPD 332 (365)
T ss_pred CC--CHHHHHHHHHHHHhCHH
Confidence 43 68899999999998765
No 79
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.45 E-value=0.00011 Score=56.34 Aligned_cols=86 Identities=17% Similarity=0.162 Sum_probs=60.7
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEE---cCC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFIT---HGG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~---hgG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~ 95 (119)
.++|.+.+++|+.+. ..++ ..+|+++. ..| ..+++||+++|+|+|..... ...+.+.+...|..++.
T Consensus 280 ~~~V~f~G~v~~~~~---~~~l--~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~----g~~e~i~~~~~G~lv~~ 350 (396)
T cd03818 280 LSRVHFLGRVPYDQY---LALL--QVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTA----PVREVITDGENGLLVDF 350 (396)
T ss_pred cceEEEeCCCCHHHH---HHHH--HhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCC----CchhhcccCCceEEcCC
Confidence 468999999986530 0145 67788774 222 35899999999999996442 34455555557887765
Q ss_pred CCCCHHHHHHHHHHHhcCccc
Q psy10598 96 DVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 96 ~~~~~~~l~~~i~~~l~~~~~ 116 (119)
. +++++.++|.+++++++.
T Consensus 351 ~--d~~~la~~i~~ll~~~~~ 369 (396)
T cd03818 351 F--DPDALAAAVIELLDDPAR 369 (396)
T ss_pred C--CHHHHHHHHHHHHhCHHH
Confidence 4 689999999999988754
No 80
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.43 E-value=0.00024 Score=52.31 Aligned_cols=85 Identities=14% Similarity=0.197 Sum_probs=60.0
Q ss_pred CCCCEEEEee-ccCCccccccccccCCCeeEEEEc------CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCcee
Q psy10598 19 HGYNILVFGV-FPFTSHFRKCYYIPHPKCRLFITH------GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGL 91 (119)
Q Consensus 19 l~~nv~~~~~-~p~~~~~~~~~ll~~~~~~~~I~h------gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~ 91 (119)
+.+|+.+.+. +|..+. ..++ ..+|+++.- |..++++||+++|+|+|..+..+ ...+...+.|.
T Consensus 245 ~~~~v~~~~~~~~~~~~---~~~~--~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~~~g~ 314 (366)
T cd03822 245 LADRVIFINRYLPDEEL---PELF--SAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDGGTGL 314 (366)
T ss_pred CCCcEEEecCcCCHHHH---HHHH--hhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeCCCcE
Confidence 5578888865 775320 1156 778888832 33578999999999999987654 23355567787
Q ss_pred EecCCCCCHHHHHHHHHHHhcCcc
Q psy10598 92 MVDFDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 92 ~l~~~~~~~~~l~~~i~~~l~~~~ 115 (119)
.+... +.+++.+++.+++++++
T Consensus 315 ~~~~~--d~~~~~~~l~~l~~~~~ 336 (366)
T cd03822 315 LVPPG--DPAALAEAIRRLLADPE 336 (366)
T ss_pred EEcCC--CHHHHHHHHHHHHcChH
Confidence 77654 58899999999998754
No 81
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.41 E-value=0.00021 Score=54.09 Aligned_cols=87 Identities=9% Similarity=0.146 Sum_probs=61.5
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
.+.+||.+.+++|.... ..++ ..+|+++.... ..+++||+++|+|+|..-..+ ..+.+.+.+.|..+
T Consensus 277 ~l~~~V~f~g~~~~~~~---~~~l--~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~~~g~~~ 347 (392)
T cd03805 277 LLEDQVIFLPSISDSQK---ELLL--SSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDGETGFLC 347 (392)
T ss_pred CCCceEEEeCCCChHHH---HHHH--hhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccCCceEEe
Confidence 45689999999987530 0156 78888884321 367899999999999974432 22345555678776
Q ss_pred cCCCCCHHHHHHHHHHHhcCccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
.. +.+++.++|.+++++++.
T Consensus 348 ~~---~~~~~a~~i~~l~~~~~~ 367 (392)
T cd03805 348 EP---TPEEFAEAMLKLANDPDL 367 (392)
T ss_pred CC---CHHHHHHHHHHHHhChHH
Confidence 53 689999999999988753
No 82
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=97.39 E-value=0.00035 Score=51.80 Aligned_cols=82 Identities=15% Similarity=0.096 Sum_probs=58.0
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEcC-----ChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeE
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHG-----GVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLM 92 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hg-----G~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~ 92 (119)
.+.+||.+.+|.+.... ++ .++|++|.-. ..++++||+++|+|+|+....+ ....+.+.+.|..
T Consensus 243 ~~~~~v~~~g~~~~~~~-----~l--~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~~~~g~~ 311 (355)
T cd03819 243 GLQDRVTFVGHCSDMPA-----AY--ALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRPGETGLL 311 (355)
T ss_pred CCcceEEEcCCcccHHH-----HH--HhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhCCCceEE
Confidence 34678999999655543 66 7788888543 2479999999999999865432 3345555557887
Q ss_pred ecCCCCCHHHHHHHHHHHhc
Q psy10598 93 VDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 93 l~~~~~~~~~l~~~i~~~l~ 112 (119)
+..+ +.+++.++|...+.
T Consensus 312 ~~~~--~~~~l~~~i~~~~~ 329 (355)
T cd03819 312 VPPG--DAEALAQALDQILS 329 (355)
T ss_pred eCCC--CHHHHHHHHHHHHh
Confidence 7644 78889999965553
No 83
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.38 E-value=0.00033 Score=52.77 Aligned_cols=86 Identities=20% Similarity=0.227 Sum_probs=62.0
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEE--c--CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFIT--H--GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~--h--gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
.+++++.+.++.++... ++ ..++++|. + |...+++||+++|+|+|+..... .....+.+...|..+
T Consensus 258 ~~~~~v~~~g~~~~~~~-----~~--~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~~~G~lv 327 (372)
T cd04949 258 GLEDYVFLKGYTRDLDE-----VY--QKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDGENGYLV 327 (372)
T ss_pred CCcceEEEcCCCCCHHH-----HH--hhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccCCCceEe
Confidence 45678888887666543 66 67888774 2 33578999999999999964321 133445556678887
Q ss_pred cCCCCCHHHHHHHHHHHhcCcc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~ 115 (119)
+.. +.+++.++|.+++.+++
T Consensus 328 ~~~--d~~~la~~i~~ll~~~~ 347 (372)
T cd04949 328 PKG--DIEALAEAIIELLNDPK 347 (372)
T ss_pred CCC--cHHHHHHHHHHHHcCHH
Confidence 643 68899999999998864
No 84
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.34 E-value=0.00011 Score=56.35 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=54.0
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEc-cCcccHHHHHHHHH---HcCceeEe-------------cCCCCCHHH
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIV-PLFADQKQNGQKAE---EEGYGLMV-------------DFDVFDYEE 102 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~-P~~~dQ~~na~~~~---~~G~g~~l-------------~~~~~~~~~ 102 (119)
++ ..||++|+..|..|+ |++..|+|+|+. ....-|..||+++. ..|+.-.+ ..++++++.
T Consensus 232 ~m--~~aDlal~~SGT~TL-E~al~g~P~Vv~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~ 308 (347)
T PRK14089 232 AL--LEAEFAFICSGTATL-EAALIGTPFVLAYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVEN 308 (347)
T ss_pred HH--HhhhHHHhcCcHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHH
Confidence 66 789999999999999 999999999994 34578899999998 45655333 235688899
Q ss_pred HHHHHHH
Q psy10598 103 LRRKVHQ 109 (119)
Q Consensus 103 l~~~i~~ 109 (119)
+.+.+.+
T Consensus 309 la~~i~~ 315 (347)
T PRK14089 309 LLKAYKE 315 (347)
T ss_pred HHHHHHH
Confidence 9888865
No 85
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=97.32 E-value=0.0002 Score=55.97 Aligned_cols=87 Identities=13% Similarity=0.025 Sum_probs=59.8
Q ss_pred CCCCEEEEeeccCCccccccccccCCC----eeEEEEcC---C-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCce
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPK----CRLFITHG---G-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYG 90 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~----~~~~I~hg---G-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g 90 (119)
+.++|.+.+++++.+. ..++ .. +|++|... | ..+++||+++|+|+|+....+ ..+.+.+...|
T Consensus 315 l~~~V~f~g~~~~~~~---~~~~--~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~~~G 385 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDV---PELY--RLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANCRNG 385 (439)
T ss_pred CCceEEecCCCCHHHH---HHHH--HHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCCCcE
Confidence 4577888887775440 0034 33 38887542 3 479999999999999975432 33445555578
Q ss_pred eEecCCCCCHHHHHHHHHHHhcCccc
Q psy10598 91 LMVDFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 91 ~~l~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
..+.+. +++++.++|.+++++++.
T Consensus 386 ~lv~~~--d~~~la~~i~~ll~~~~~ 409 (439)
T TIGR02472 386 LLVDVL--DLEAIASALEDALSDSSQ 409 (439)
T ss_pred EEeCCC--CHHHHHHHHHHHHhCHHH
Confidence 887654 688999999999987653
No 86
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.25 E-value=0.00036 Score=54.90 Aligned_cols=86 Identities=13% Similarity=0.134 Sum_probs=61.3
Q ss_pred CCEEEEeeccCCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHH---cCceeEe
Q psy10598 21 YNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEE---EGYGLMV 93 (119)
Q Consensus 21 ~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~---~G~g~~l 93 (119)
.|+.+.+|+|..+. ..++ ..+|++|.-.. ..+++||+++|+|+|+....+ ..+.+++ .+.|..+
T Consensus 312 ~~V~f~G~v~~~ev---~~~~--~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv 382 (465)
T PLN02871 312 TPTVFTGMLQGDEL---SQAY--ASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLY 382 (465)
T ss_pred CCeEEeccCCHHHH---HHHH--HHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEe
Confidence 47899999874320 1156 78999995433 467999999999999875432 2234444 5778888
Q ss_pred cCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
+.. +.+++.++|.++++|++.+
T Consensus 383 ~~~--d~~~la~~i~~ll~~~~~~ 404 (465)
T PLN02871 383 TPG--DVDDCVEKLETLLADPELR 404 (465)
T ss_pred CCC--CHHHHHHHHHHHHhCHHHH
Confidence 654 6889999999999887543
No 87
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.25 E-value=0.00019 Score=46.60 Aligned_cols=79 Identities=19% Similarity=0.278 Sum_probs=48.3
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEc-----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH-----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h-----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
.+|+.+.+|++.... ++ ..+|+.+.- +-.+++.|++++|+|+|+.+. ......+..+.|..+.
T Consensus 52 ~~~v~~~g~~~e~~~-----~l--~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~~~~~~~~ 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPE-----IL--AAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEEDGCGVLVA 119 (135)
T ss_dssp HCTEEEE-S-HHHHH-----HH--HC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS---SEEEE-T
T ss_pred CCCEEEcCCHHHHHH-----HH--HhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheeecCCeEEEC
Confidence 469999999965443 66 567777752 224899999999999999754 1223344467777663
Q ss_pred CCCCCHHHHHHHHHHHhcC
Q psy10598 95 FDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~ 113 (119)
. +++++.++|.++++|
T Consensus 120 -~--~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 120 -N--DPEELAEAIERLLND 135 (135)
T ss_dssp -T---HHHHHHHHHHHHH-
T ss_pred -C--CHHHHHHHHHHHhcC
Confidence 2 899999999999865
No 88
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.24 E-value=0.00038 Score=55.03 Aligned_cols=85 Identities=21% Similarity=0.281 Sum_probs=59.5
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHc------C
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE------G 88 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~------G 88 (119)
+.+||.+.+...-.. ++ +++|+++.- |-..+++||+++|+|+|.-... .....+++. .
T Consensus 352 l~~~V~f~G~~~v~~------~l--~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~~~elv~~~~~~~~g~ 419 (475)
T cd03813 352 LEDNVKFTGFQNVKE------YL--PKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVG----SCRELIEGADDEALGP 419 (475)
T ss_pred CCCeEEEcCCccHHH------HH--HhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCC----ChHHHhcCCcccccCC
Confidence 567898888433334 67 788888744 3348999999999999995432 233444442 2
Q ss_pred ceeEecCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 89 YGLMVDFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 89 ~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
.|..+... +.+++.++|.++++|++.+
T Consensus 420 ~G~lv~~~--d~~~la~ai~~ll~~~~~~ 446 (475)
T cd03813 420 AGEVVPPA--DPEALARAILRLLKDPELR 446 (475)
T ss_pred ceEEECCC--CHHHHHHHHHHHhcCHHHH
Confidence 67777643 6899999999999887543
No 89
>PLN02275 transferase, transferring glycosyl groups
Probab=97.08 E-value=0.0018 Score=49.52 Aligned_cols=78 Identities=12% Similarity=0.110 Sum_probs=54.4
Q ss_pred CCEEEEe-eccCCccccccccccCCCeeEEEE----c--CC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeE
Q psy10598 21 YNILVFG-VFPFTSHFRKCYYIPHPKCRLFIT----H--GG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLM 92 (119)
Q Consensus 21 ~nv~~~~-~~p~~~~~~~~~ll~~~~~~~~I~----h--gG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~ 92 (119)
+|+.+.+ |+|..+. ..++ ..+|+++. . -| .++++||+++|+|+|..... .+.+.+++.+.|..
T Consensus 286 ~~v~~~~~~~~~~~~---~~~l--~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~g~~G~l 356 (371)
T PLN02275 286 RHVAFRTMWLEAEDY---PLLL--GSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKDGKNGLL 356 (371)
T ss_pred CceEEEcCCCCHHHH---HHHH--HhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccCCCCeEE
Confidence 4567655 6765430 0146 78999884 1 12 36899999999999996532 25566677778988
Q ss_pred ecCCCCCHHHHHHHHHHHh
Q psy10598 93 VDFDVFDYEELRRKVHQVL 111 (119)
Q Consensus 93 l~~~~~~~~~l~~~i~~~l 111 (119)
++ +.+++.++|.+++
T Consensus 357 v~----~~~~la~~i~~l~ 371 (371)
T PLN02275 357 FS----SSSELADQLLELL 371 (371)
T ss_pred EC----CHHHHHHHHHHhC
Confidence 75 4889999998764
No 90
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.07 E-value=0.0017 Score=54.10 Aligned_cols=84 Identities=18% Similarity=0.249 Sum_probs=61.8
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEE---cCC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFIT---HGG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~---hgG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
.+.++|.+.+|.++... ++ ..+|++|. +.| .++++||+++|+|+|..... ...+.+.+...|..+
T Consensus 571 gL~~~V~flG~~~dv~~-----ll--~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg~~GlLv 639 (694)
T PRK15179 571 GMGERILFTGLSRRVGY-----WL--TQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEGVTGLTL 639 (694)
T ss_pred CCCCcEEEcCCcchHHH-----HH--HhcCEEEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCCCCEEEe
Confidence 35688999999876553 67 78888885 444 48999999999999997543 234455555678888
Q ss_pred cCCCCCHHHHHHHHHHHhc
Q psy10598 94 DFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~ 112 (119)
...+.+.+++.+++.+++.
T Consensus 640 ~~~d~~~~~La~aL~~ll~ 658 (694)
T PRK15179 640 PADTVTAPDVAEALARIHD 658 (694)
T ss_pred CCCCCChHHHHHHHHHHHh
Confidence 8776667778777776654
No 91
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.05 E-value=0.00084 Score=52.17 Aligned_cols=80 Identities=11% Similarity=0.097 Sum_probs=56.6
Q ss_pred CCEEEE-eeccCCccccccccccCCCeeEEEE----cC---ChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeE
Q psy10598 21 YNILVF-GVFPFTSHFRKCYYIPHPKCRLFIT----HG---GVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLM 92 (119)
Q Consensus 21 ~nv~~~-~~~p~~~~~~~~~ll~~~~~~~~I~----hg---G~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~ 92 (119)
+|+.+. +|+|..+. ..++ ..+|+++. .- -.++++|++++|+|+|+.... ...+.+++.+.|..
T Consensus 294 ~~~~~~~g~~~~~~~---~~~l--~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~~~~G~l 364 (415)
T cd03816 294 KKVTIRTPWLSAEDY---PKLL--ASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKHGENGLV 364 (415)
T ss_pred CcEEEEcCcCCHHHH---HHHH--HhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcCCCCEEE
Confidence 366655 57764430 1156 78899884 11 246899999999999996432 34456677778888
Q ss_pred ecCCCCCHHHHHHHHHHHhcC
Q psy10598 93 VDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 93 l~~~~~~~~~l~~~i~~~l~~ 113 (119)
+. +.++++++|.++++|
T Consensus 365 v~----d~~~la~~i~~ll~~ 381 (415)
T cd03816 365 FG----DSEELAEQLIDLLSN 381 (415)
T ss_pred EC----CHHHHHHHHHHHHhc
Confidence 73 789999999999987
No 92
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=96.88 E-value=0.00021 Score=52.60 Aligned_cols=87 Identities=17% Similarity=0.166 Sum_probs=57.7
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
..++|+.+.+++|+.+. ..++ ..+|+++.- |...+++||+++|+|+|+....+ ..+.+. ..|..+
T Consensus 250 ~~~~~v~~~g~~~~~~~---~~~~--~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~--~~~~~~ 318 (365)
T cd03809 250 GLGDRVRFLGYVSDEEL---AALY--RGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAG--DAALYF 318 (365)
T ss_pred CCCCeEEECCCCChhHH---HHHH--hhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceec--Cceeee
Confidence 46789999999976530 0145 677877633 33468999999999999865421 111122 235555
Q ss_pred cCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
... +.+++.++|.+++.|++.+
T Consensus 319 ~~~--~~~~~~~~i~~l~~~~~~~ 340 (365)
T cd03809 319 DPL--DPEALAAAIERLLEDPALR 340 (365)
T ss_pred CCC--CHHHHHHHHHHHhcCHHHH
Confidence 433 7899999999998887643
No 93
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=96.71 E-value=0.0036 Score=47.30 Aligned_cols=71 Identities=17% Similarity=0.213 Sum_probs=50.8
Q ss_pred cccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCC----HHHHHHHHHHHh
Q psy10598 40 YIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFD----YEELRRKVHQVL 111 (119)
Q Consensus 40 ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~----~~~l~~~i~~~l 111 (119)
++ ..+|++|.- |...+++||+++|+|+|+.... ...+.+++.+.|..++..+.+ .+++.++|.+++
T Consensus 277 ~~--~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~ 350 (388)
T TIGR02149 277 LL--SNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL 350 (388)
T ss_pred HH--HhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH
Confidence 56 789998853 2246789999999999997543 244556666678888754322 278999999988
Q ss_pred cCccc
Q psy10598 112 YEPKY 116 (119)
Q Consensus 112 ~~~~~ 116 (119)
.+++.
T Consensus 351 ~~~~~ 355 (388)
T TIGR02149 351 ADPEL 355 (388)
T ss_pred hCHHH
Confidence 77643
No 94
>PRK10307 putative glycosyl transferase; Provisional
Probab=96.67 E-value=0.0039 Score=47.93 Aligned_cols=85 Identities=13% Similarity=0.136 Sum_probs=56.3
Q ss_pred CCEEEEeeccCCccccccccccCCCeeEEE--EcC-C-----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeE
Q psy10598 21 YNILVFGVFPFTSHFRKCYYIPHPKCRLFI--THG-G-----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLM 92 (119)
Q Consensus 21 ~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I--~hg-G-----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~ 92 (119)
+|+.+.+|+|..+. ..++ ..+|+++ +.. + .+.+.|++++|+|+|+....+.. ....+. +.|..
T Consensus 284 ~~v~f~G~~~~~~~---~~~~--~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~--~~G~~ 354 (412)
T PRK10307 284 PNVHFLPLQPYDRL---PALL--KMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE--GIGVC 354 (412)
T ss_pred CceEEeCCCCHHHH---HHHH--HhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh--CCcEE
Confidence 48999999875420 1156 6677755 232 2 24578999999999998654321 112223 67888
Q ss_pred ecCCCCCHHHHHHHHHHHhcCccc
Q psy10598 93 VDFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 93 l~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
++.. +.+++.++|.+++++++.
T Consensus 355 ~~~~--d~~~la~~i~~l~~~~~~ 376 (412)
T PRK10307 355 VEPE--SVEALVAAIAALARQALL 376 (412)
T ss_pred eCCC--CHHHHHHHHHHHHhCHHH
Confidence 7654 688999999999877643
No 95
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.65 E-value=0.0027 Score=46.64 Aligned_cols=81 Identities=19% Similarity=0.145 Sum_probs=56.0
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEc----CC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
+.+++.+.+++++.+. ..++ ..+|+++.- .| ..+++||+++|+|+|+....+ ..+.+.+...|..+
T Consensus 222 ~~~~v~~~G~~~~~~~---~~~~--~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~~~~g~l~ 292 (335)
T cd03802 222 DGPDIEYLGEVGGAEK---AELL--GNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVEDGVTGFLV 292 (335)
T ss_pred cCCcEEEeCCCCHHHH---HHHH--HhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeCCCcEEEe
Confidence 4689999999987530 0045 677887732 23 468999999999999875532 22344444468777
Q ss_pred cCCCCCHHHHHHHHHHHhc
Q psy10598 94 DFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~ 112 (119)
+. .+++.+++.+++.
T Consensus 293 ~~----~~~l~~~l~~l~~ 307 (335)
T cd03802 293 DS----VEELAAAVARADR 307 (335)
T ss_pred CC----HHHHHHHHHHHhc
Confidence 63 8889999988764
No 96
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.64 E-value=0.0017 Score=49.25 Aligned_cols=85 Identities=16% Similarity=0.204 Sum_probs=57.1
Q ss_pred CCCCEEEEeecc--CCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeE
Q psy10598 19 HGYNILVFGVFP--FTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLM 92 (119)
Q Consensus 19 l~~nv~~~~~~p--~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~ 92 (119)
+.+++.+.++.+ ... -..++ ..+|+++.... ..+++||+++|+|+|+....+ ....+.+...|..
T Consensus 250 ~~~~v~~~~~~~~~~~~---~~~~~--~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~~~g~~ 320 (372)
T cd03792 250 GDPDIHVLTLPPVSDLE---VNALQ--RASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDGETGFL 320 (372)
T ss_pred CCCCeEEEecCCCCHHH---HHHHH--HhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccCCceEE
Confidence 456788888863 221 01156 78999985432 469999999999999975432 2234555566776
Q ss_pred ecCCCCCHHHHHHHHHHHhcCccc
Q psy10598 93 VDFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 93 l~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
++ +.+++..+|.+++.+++.
T Consensus 321 ~~----~~~~~a~~i~~ll~~~~~ 340 (372)
T cd03792 321 VD----TVEEAAVRILYLLRDPEL 340 (372)
T ss_pred eC----CcHHHHHHHHHHHcCHHH
Confidence 65 456788889888887654
No 97
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=96.32 E-value=0.013 Score=44.95 Aligned_cols=83 Identities=12% Similarity=0.112 Sum_probs=55.1
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcC---Ch-hHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHG---GV-HSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hg---G~-~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
+.+++.+.+|+|+.+. ..++ +.+|+++.-. |. .++.||+++|+|+|+.+..+- .+.+.+ |.+....
T Consensus 248 l~~~v~~~G~~~~~~~---~~~l--~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~----~e~i~~-~~~~~~~ 317 (398)
T cd03796 248 LQDRVELLGAVPHERV---RDVL--VQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI----PEVLPP-DMILLAE 317 (398)
T ss_pred CCCeEEEeCCCCHHHH---HHHH--HhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCc----hhheeC-CceeecC
Confidence 4578999999875320 1156 7789887432 32 599999999999999766432 223333 3343333
Q ss_pred CCCCCHHHHHHHHHHHhcCc
Q psy10598 95 FDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~ 114 (119)
. +.+++.+++.+++.+.
T Consensus 318 ~---~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 318 P---DVESIVRKLEEAISIL 334 (398)
T ss_pred C---CHHHHHHHHHHHHhCh
Confidence 2 6788999999988653
No 98
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.31 E-value=0.0086 Score=45.22 Aligned_cols=79 Identities=20% Similarity=0.226 Sum_probs=54.0
Q ss_pred CCCCCEEEEeeccCCccccccccccC-CCeeEEEEcC--------C------hhHHHHHHHhCCCEEEccCcccHHHHHH
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPH-PKCRLFITHG--------G------VHSAFESIYHAVPMVIVPLFADQKQNGQ 82 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~-~~~~~~I~hg--------G------~~t~~eal~~g~P~i~~P~~~dQ~~na~ 82 (119)
...+||.+.+|+|..+ +..+ ...-.+|.-+ . .+-+.+.+++|+|+|+.+ ....++
T Consensus 204 ~~~~~V~f~G~~~~ee------l~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~ 273 (333)
T PRK09814 204 ENSANISYKGWFDPEE------LPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIAD 273 (333)
T ss_pred ccCCCeEEecCCCHHH------HHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHH
Confidence 4567999999999765 3211 2211122211 1 134778899999999954 456778
Q ss_pred HHHHcCceeEecCCCCCHHHHHHHHHHH
Q psy10598 83 KAEEEGYGLMVDFDVFDYEELRRKVHQV 110 (119)
Q Consensus 83 ~~~~~G~g~~l~~~~~~~~~l~~~i~~~ 110 (119)
.+++.++|+.++ +.+++.+++.++
T Consensus 274 ~V~~~~~G~~v~----~~~el~~~l~~~ 297 (333)
T PRK09814 274 FIVENGLGFVVD----SLEELPEIIDNI 297 (333)
T ss_pred HHHhCCceEEeC----CHHHHHHHHHhc
Confidence 899999999987 567788888765
No 99
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=96.28 E-value=0.0016 Score=51.92 Aligned_cols=70 Identities=14% Similarity=0.196 Sum_probs=38.6
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEE---EcCChhHHHHHHHhCCCEEEccCcccH-HHHHHHHHHcCceeEec
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFI---THGGVHSAFESIYHAVPMVIVPLFADQ-KQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I---~hgG~~t~~eal~~g~P~i~~P~~~dQ-~~na~~~~~~G~g~~l~ 94 (119)
++.+.+.++.|..+. +-.+..+|+++ ..+|.+|.+||++.|+|+|..|-..-. ..-+..+...|+.-.+.
T Consensus 341 ~~Ri~f~~~~~~~eh-----l~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 341 PDRIIFSPVAPREEH-----LRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp GGGEEEEE---HHHH-----HHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred hhhEEEcCCCCHHHH-----HHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 467888777765441 33446788887 457889999999999999999864322 33445567778775554
No 100
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.23 E-value=0.0038 Score=46.27 Aligned_cols=83 Identities=13% Similarity=0.167 Sum_probs=52.3
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEcCC-----hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeE
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG-----VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLM 92 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG-----~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~ 92 (119)
...++|.+.+++|+.+. -.++ .++|+++.+.- ..++.||+++|+|+|+....+. .+.+.. .|..
T Consensus 245 ~~~~~V~~~g~~~~~~~---~~~~--~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~--~g~~ 313 (363)
T cd04955 245 AADPRIIFVGPIYDQEL---LELL--RYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGD--KAIY 313 (363)
T ss_pred CCCCcEEEccccChHHH---HHHH--HhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecC--CeeE
Confidence 35679999999987530 0044 56777765432 2689999999999999754321 112222 3444
Q ss_pred ecCCCCCHHHHHHHHHHHhcCcc
Q psy10598 93 VDFDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 93 l~~~~~~~~~l~~~i~~~l~~~~ 115 (119)
+... +.+.+++.+++++++
T Consensus 314 ~~~~----~~l~~~i~~l~~~~~ 332 (363)
T cd04955 314 FKVG----DDLASLLEELEADPE 332 (363)
T ss_pred ecCc----hHHHHHHHHHHhCHH
Confidence 4432 228888888887753
No 101
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=96.05 E-value=0.0067 Score=48.66 Aligned_cols=85 Identities=15% Similarity=0.160 Sum_probs=58.0
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEc---CC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH---GG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h---gG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
+.++|.+.++.+... ++ ..++++|.- -| ..+++||+++|+|+|...... .+...+++...|..+.
T Consensus 374 l~~~V~f~G~~~~~~------~~--~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g~nG~lv~ 442 (500)
T TIGR02918 374 AQDYIHLKGHRNLSE------VY--KDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDNKNGYLIP 442 (500)
T ss_pred CCCeEEEcCCCCHHH------HH--HhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCCCCEEEEe
Confidence 456788888876555 77 678888852 33 489999999999999965421 1334455555787776
Q ss_pred CC--CCC----HHHHHHHHHHHhcCc
Q psy10598 95 FD--VFD----YEELRRKVHQVLYEP 114 (119)
Q Consensus 95 ~~--~~~----~~~l~~~i~~~l~~~ 114 (119)
.. .-+ .++++++|.+++.++
T Consensus 443 ~~~~~~d~~~~~~~la~~I~~ll~~~ 468 (500)
T TIGR02918 443 IDEEEDDEDQIITALAEKIVEYFNSN 468 (500)
T ss_pred CCccccchhHHHHHHHHHHHHHhChH
Confidence 31 122 678999999988543
No 102
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=95.85 E-value=0.0079 Score=41.17 Aligned_cols=54 Identities=7% Similarity=0.082 Sum_probs=39.5
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcc
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFA 75 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~ 75 (119)
....|+.+.++++..+ +...++ ..+|++++-.. .++++||+++|+|+|+.+...
T Consensus 158 ~~~~~v~~~~~~~~~~--~~~~~~--~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 158 LLLDRVIFLGGLDPEE--LLALLL--AAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred CCcccEEEeCCCCcHH--HHHHHh--hcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 3567999999974322 012244 45999998776 699999999999999986643
No 103
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=95.84 E-value=0.0063 Score=52.68 Aligned_cols=88 Identities=14% Similarity=0.036 Sum_probs=60.2
Q ss_pred CCCCEEEEeeccCCccccccccccCCCe----eEEEEc---CC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCce
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKC----RLFITH---GG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYG 90 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~----~~~I~h---gG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g 90 (119)
+.++|.+.+|+++.+. ..++ ..+ |+||.- -| ..+++||+++|+|+|.-...+ ....+.....|
T Consensus 546 L~g~V~FlG~v~~edv---p~lY--r~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g~nG 616 (1050)
T TIGR02468 546 LYGQVAYPKHHKQSDV---PDIY--RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVLDNG 616 (1050)
T ss_pred CCCeEEecCCCCHHHH---HHHH--HHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccCCcE
Confidence 4577888888776540 0033 333 688764 23 489999999999999975432 22333444568
Q ss_pred eEecCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 91 LMVDFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 91 ~~l~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
..+++. ++++++++|.+++.++..+
T Consensus 617 lLVdP~--D~eaLA~AL~~LL~Dpelr 641 (1050)
T TIGR02468 617 LLVDPH--DQQAIADALLKLVADKQLW 641 (1050)
T ss_pred EEECCC--CHHHHHHHHHHHhhCHHHH
Confidence 888754 6889999999999887654
No 104
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.58 E-value=0.021 Score=46.64 Aligned_cols=67 Identities=21% Similarity=0.208 Sum_probs=49.0
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEc---CC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH---GG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h---gG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
+.++|.+.+|.++... ++ ..+|++|.. -| .++++||+++|+|+|..... .+.+.+.+...|..++
T Consensus 453 L~d~V~FlG~~~Dv~~-----~L--aaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG~nG~LVp 521 (578)
T PRK15490 453 ILERILFVGASRDVGY-----WL--QKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEGVSGFILD 521 (578)
T ss_pred CCCcEEECCChhhHHH-----HH--HhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccCCcEEEEC
Confidence 5688999998765543 67 789999853 34 58999999999999986542 3445555666788776
Q ss_pred CC
Q psy10598 95 FD 96 (119)
Q Consensus 95 ~~ 96 (119)
..
T Consensus 522 ~~ 523 (578)
T PRK15490 522 DA 523 (578)
T ss_pred CC
Confidence 54
No 105
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=95.57 E-value=0.033 Score=33.94 Aligned_cols=59 Identities=20% Similarity=0.197 Sum_probs=41.1
Q ss_pred cCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCccccc
Q psy10598 52 HGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEPKYVG 118 (119)
Q Consensus 52 hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~ 118 (119)
.|-...++|++++|+|+|.-+. ......+.+---++..+ +.+++.+++..+++|++.++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~~~~~~~~~----~~~el~~~i~~ll~~~~~~~ 67 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFEDGEHIITYN----DPEELAEKIEYLLENPEERR 67 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCCCCeEEEEC----CHHHHHHHHHHHHCCHHHHH
Confidence 4455789999999999999643 33333332222444544 89999999999999886553
No 106
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.57 E-value=0.0094 Score=48.12 Aligned_cols=76 Identities=20% Similarity=0.224 Sum_probs=57.6
Q ss_pred CCEEEEeecc--CCccccccccccCCCeeEEEEcC---ChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecC
Q psy10598 21 YNILVFGVFP--FTSHFRKCYYIPHPKCRLFITHG---GVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 21 ~nv~~~~~~p--~~~~~~~~~ll~~~~~~~~I~hg---G~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~ 95 (119)
..|.+.++.+ +... .+ ..++++|.-+ |.++.+||+.+|+|+| .......+.+..-|.++.
T Consensus 409 ~~v~f~gy~~e~dl~~-----~~--~~arl~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li~- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLIS-----AL--DKLRLIIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYIID- 473 (519)
T ss_pred cEEEEEecCCHHHHHH-----HH--hhheEEEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEeC-
Confidence 5788888877 3322 56 7889998654 6789999999999999 233445666666787774
Q ss_pred CCCCHHHHHHHHHHHhcCc
Q psy10598 96 DVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 96 ~~~~~~~l~~~i~~~l~~~ 114 (119)
+..+|.+++...|.++
T Consensus 474 ---d~~~l~~al~~~L~~~ 489 (519)
T TIGR03713 474 ---DISELLKALDYYLDNL 489 (519)
T ss_pred ---CHHHHHHHHHHHHhCH
Confidence 7889999999999875
No 107
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.53 E-value=0.045 Score=41.82 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=51.1
Q ss_pred CCEEEEeeccCCccccccccccCCCeeEEEE--------cCC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCcee
Q psy10598 21 YNILVFGVFPFTSHFRKCYYIPHPKCRLFIT--------HGG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGL 91 (119)
Q Consensus 21 ~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~--------hgG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~ 91 (119)
+||.+.+++|..+. -.++ ..+|++|. .++ .+.++|++++|+|+|..+.. ...+..+.+.
T Consensus 254 ~nV~~~G~~~~~~l---~~~l--~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~-------~~~~~~~~~~ 321 (373)
T cd04950 254 PNVHYLGPKPYKEL---PAYL--AGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP-------EVRRYEDEVV 321 (373)
T ss_pred CCEEEeCCCCHHHH---HHHH--HhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcH-------HHHhhcCcEE
Confidence 79999999975430 0145 56777663 222 25699999999999987641 1222233233
Q ss_pred EecCCCCCHHHHHHHHHHHhcCc
Q psy10598 92 MVDFDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 92 ~l~~~~~~~~~l~~~i~~~l~~~ 114 (119)
... . +.+++.++|.+++.++
T Consensus 322 ~~~-~--d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 322 LIA-D--DPEEFVAAIEKALLED 341 (373)
T ss_pred EeC-C--CHHHHHHHHHHHHhcC
Confidence 333 2 7899999999976543
No 108
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=95.45 E-value=0.02 Score=44.66 Aligned_cols=86 Identities=8% Similarity=-0.047 Sum_probs=57.5
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEcC---C-hhHHHHHHHhCCCEEEccCcccHHHHHHHHH---HcCce
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHG---G-VHSAFESIYHAVPMVIVPLFADQKQNGQKAE---EEGYG 90 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hg---G-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~---~~G~g 90 (119)
.+.++|.+.+++|..+. ..++ ..++++|+-. | ..++.||+++|+|.|+....+.- ...++ +...|
T Consensus 302 ~l~~~V~f~g~v~~~~l---~~~l--~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~g~~G 373 (419)
T cd03806 302 GLEDKVEFVVNAPFEEL---LEEL--STASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPL---LDIVVPWDGGPTG 373 (419)
T ss_pred CCCCeEEEecCCCHHHH---HHHH--HhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCc---hheeeccCCCCce
Confidence 35689999999875430 1166 6788877422 2 36889999999999986432211 11122 34567
Q ss_pred eEecCCCCCHHHHHHHHHHHhcCcc
Q psy10598 91 LMVDFDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 91 ~~l~~~~~~~~~l~~~i~~~l~~~~ 115 (119)
.... ++++++++|.+++++++
T Consensus 374 ~l~~----d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 374 FLAS----TAEEYAEAIEKILSLSE 394 (419)
T ss_pred EEeC----CHHHHHHHHHHHHhCCH
Confidence 7653 78999999999998653
No 109
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=95.21 E-value=0.083 Score=40.51 Aligned_cols=65 Identities=20% Similarity=0.148 Sum_probs=45.7
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 112 (119)
++ ..|+++|+-|| ....||...|+|.|.+ +.++-...-+.+.+.|.-.... +++++.+.+++.+.
T Consensus 245 Ll--~~a~l~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~Gll~~~~----~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 245 LL--YYADLVIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEKGLLYHST----DPDEIVEYVRKNLG 309 (335)
T ss_pred HH--HhcCEEEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHCCCeEecC----CHHHHHHHHHHhhh
Confidence 77 67999999888 6777999999999986 2233334446677787633332 67777777666553
No 110
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.18 E-value=0.017 Score=45.54 Aligned_cols=83 Identities=8% Similarity=-0.007 Sum_probs=53.8
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcC---C-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHc------C
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHG---G-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE------G 88 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hg---G-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~------G 88 (119)
.+.|+.+...++.... ..++ ..+|+++.-. | ..+.+||+++|+|.|+....+ ....+.+. +
T Consensus 344 ~~~~v~~~~~~~~~~~---~~~~--~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~ 414 (473)
T TIGR02095 344 YPGNVRVIIGYDEALA---HLIY--AGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESG 414 (473)
T ss_pred CCCcEEEEEcCCHHHH---HHHH--HhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCC
Confidence 4567776665554310 0155 7899988532 3 358899999999999865431 11222222 6
Q ss_pred ceeEecCCCCCHHHHHHHHHHHhc
Q psy10598 89 YGLMVDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 89 ~g~~l~~~~~~~~~l~~~i~~~l~ 112 (119)
.|..+... +++++.++|.+++.
T Consensus 415 ~G~l~~~~--d~~~la~~i~~~l~ 436 (473)
T TIGR02095 415 TGFLFEEY--DPGALLAALSRALR 436 (473)
T ss_pred ceEEeCCC--CHHHHHHHHHHHHH
Confidence 78887654 68889999988876
No 111
>PLN02501 digalactosyldiacylglycerol synthase
Probab=94.83 E-value=0.046 Score=45.93 Aligned_cols=78 Identities=13% Similarity=0.040 Sum_probs=51.0
Q ss_pred CEEEEeeccCCccccccccccCCCeeEEEEc---CC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCC
Q psy10598 22 NILVFGVFPFTSHFRKCYYIPHPKCRLFITH---GG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDV 97 (119)
Q Consensus 22 nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h---gG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~ 97 (119)
++.+.++.+.... ++ ..+|+||.- -| ..+++||+++|+|+|.....+... +...+.|...
T Consensus 602 ~V~FLG~~dd~~~-----ly--asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g~nGll~---- 665 (794)
T PLN02501 602 NLNFLKGRDHADD-----SL--HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSFPNCLTY---- 665 (794)
T ss_pred EEEecCCCCCHHH-----HH--HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----EeecCCeEec----
Confidence 3555555443321 56 788998853 22 488999999999999986544221 2222334332
Q ss_pred CCHHHHHHHHHHHhcCcc
Q psy10598 98 FDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~~~~ 115 (119)
-+.+++.++|.+++.++.
T Consensus 666 ~D~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 666 KTSEDFVAKVKEALANEP 683 (794)
T ss_pred CCHHHHHHHHHHHHhCch
Confidence 268999999999998764
No 112
>PHA01633 putative glycosyl transferase group 1
Probab=94.72 E-value=0.076 Score=40.69 Aligned_cols=89 Identities=13% Similarity=0.080 Sum_probs=56.0
Q ss_pred CCCCCEEEEeec---cCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccC------cccH------H
Q psy10598 18 CHGYNILVFGVF---PFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPL------FADQ------K 78 (119)
Q Consensus 18 ~l~~nv~~~~~~---p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~------~~dQ------~ 78 (119)
.+++++.+.+++ +..+ -..++ ..+|+++.- |-..+++||+++|+|+|.--. .+++ .
T Consensus 198 ~l~~~V~f~g~~G~~~~~d---l~~~y--~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~ 272 (335)
T PHA01633 198 EVPANVHFVAEFGHNSREY---IFAFY--GAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKS 272 (335)
T ss_pred CCCCcEEEEecCCCCCHHH---HHHHH--HhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCC
Confidence 467889988554 3221 00155 788998863 224789999999999998622 1222 1
Q ss_pred HHHHHHH--HcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 79 QNGQKAE--EEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 79 ~na~~~~--~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
.+..... +.|.|..++ ..++++++++|.+++..
T Consensus 273 ~~v~~~~~~~~g~g~~~~--~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 273 SKVEEYYDKEHGQKWKIH--KFQIEDMANAIILAFEL 307 (335)
T ss_pred CCHHHhcCcccCceeeec--CCCHHHHHHHHHHHHhc
Confidence 2222222 246666654 45899999999988533
No 113
>PLN02949 transferase, transferring glycosyl groups
Probab=94.55 E-value=0.019 Score=45.67 Aligned_cols=84 Identities=10% Similarity=0.016 Sum_probs=53.6
Q ss_pred CCCCCEEEEeeccCCccccccccccCCCeeEEEEc---CCh-hHHHHHHHhCCCEEEccCcc---cHHHHHHHHHHcCce
Q psy10598 18 CHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH---GGV-HSAFESIYHAVPMVIVPLFA---DQKQNGQKAEEEGYG 90 (119)
Q Consensus 18 ~l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h---gG~-~t~~eal~~g~P~i~~P~~~---dQ~~na~~~~~~G~g 90 (119)
.+.++|.+.+++|..+ ...++ .++++++.- -|. .++.||+++|+|.|+....+ |...+. .....|
T Consensus 332 ~L~~~V~f~g~v~~~e---l~~ll--~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~---~~g~tG 403 (463)
T PLN02949 332 GLDGDVEFHKNVSYRD---LVRLL--GGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE---DGQQTG 403 (463)
T ss_pred CCCCcEEEeCCCCHHH---HHHHH--HhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC---CCCccc
Confidence 3578899999987543 11156 678888732 232 57999999999999975432 111100 001134
Q ss_pred eEecCCCCCHHHHHHHHHHHhcC
Q psy10598 91 LMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 91 ~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
...+ +.++++++|.+++++
T Consensus 404 ~l~~----~~~~la~ai~~ll~~ 422 (463)
T PLN02949 404 FLAT----TVEEYADAILEVLRM 422 (463)
T ss_pred ccCC----CHHHHHHHHHHHHhC
Confidence 4432 788999999999874
No 114
>PLN02846 digalactosyldiacylglycerol synthase
Probab=94.30 E-value=0.08 Score=42.29 Aligned_cols=64 Identities=14% Similarity=0.073 Sum_probs=45.6
Q ss_pred cccCCCeeEEEEcC----ChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCc
Q psy10598 40 YIPHPKCRLFITHG----GVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 40 ll~~~~~~~~I~hg----G~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 114 (119)
++ ..+|+||.-+ =..+++||+++|+|+|...... + ..+.+.+.|...+ +.+++.+++.+++.++
T Consensus 297 ~~--~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~~ng~~~~----~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 297 LF--HDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQFPNCRTYD----DGKGFVRATLKALAEE 364 (462)
T ss_pred HH--HhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecCCceEecC----CHHHHHHHHHHHHccC
Confidence 66 6789999663 3488999999999999975432 1 3344455565543 6788888888888653
No 115
>PRK14098 glycogen synthase; Provisional
Probab=93.89 E-value=0.087 Score=42.15 Aligned_cols=84 Identities=15% Similarity=0.080 Sum_probs=54.6
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcCC----hhHHHHHHHhCCCEEEccCcc--cHHHHHHHHHHcCceeE
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGG----VHSAFESIYHAVPMVIVPLFA--DQKQNGQKAEEEGYGLM 92 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG----~~t~~eal~~g~P~i~~P~~~--dQ~~na~~~~~~G~g~~ 92 (119)
+++++.+.++++.... ..++ +.+|+++.-.= ..+.+||+++|+|.|+....+ |...+ ..++.+.|..
T Consensus 360 ~~~~V~~~g~~~~~~~---~~~~--a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~~~G~l 432 (489)
T PRK14098 360 HPEQVSVQTEFTDAFF---HLAI--AGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDKGSGFI 432 (489)
T ss_pred CCCCEEEEEecCHHHH---HHHH--HhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCCCceeE
Confidence 5678999988876310 0056 78999985432 367889999999988865422 21110 1112467887
Q ss_pred ecCCCCCHHHHHHHHHHHh
Q psy10598 93 VDFDVFDYEELRRKVHQVL 111 (119)
Q Consensus 93 l~~~~~~~~~l~~~i~~~l 111 (119)
+... +++++.++|.+++
T Consensus 433 ~~~~--d~~~la~ai~~~l 449 (489)
T PRK14098 433 FHDY--TPEALVAKLGEAL 449 (489)
T ss_pred eCCC--CHHHHHHHHHHHH
Confidence 7643 6888999988764
No 116
>PLN00142 sucrose synthase
Probab=93.75 E-value=0.1 Score=44.41 Aligned_cols=66 Identities=14% Similarity=0.135 Sum_probs=45.2
Q ss_pred CeeEEEEc---CC-hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHH----hcCccc
Q psy10598 45 KCRLFITH---GG-VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQV----LYEPKY 116 (119)
Q Consensus 45 ~~~~~I~h---gG-~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~----l~~~~~ 116 (119)
.+|+||.- -| ..++.||+++|+|+|+....+ ....+++-..|..+++. ++++++++|.++ +.|++.
T Consensus 666 aaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG~tG~LV~P~--D~eaLA~aI~~lLekLl~Dp~l 739 (815)
T PLN00142 666 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDGVSGFHIDPY--HGDEAANKIADFFEKCKEDPSY 739 (815)
T ss_pred hCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEeCCC--CHHHHHHHHHHHHHHhcCCHHH
Confidence 45787753 33 368999999999999865433 34455555678888764 677888887654 356544
No 117
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=92.81 E-value=0.079 Score=41.31 Aligned_cols=80 Identities=15% Similarity=0.280 Sum_probs=58.4
Q ss_pred CEEEEe---eccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCC
Q psy10598 22 NILVFG---VFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVF 98 (119)
Q Consensus 22 nv~~~~---~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~ 98 (119)
|+.+.+ |.+... ++ ..|.+++|-.| |-.-||-..|+|.+++-...++++ ..+.|.-+.+..
T Consensus 263 ~v~li~pl~~~~f~~------L~--~~a~~iltDSG-giqEEAp~lg~Pvl~lR~~TERPE----~v~agt~~lvg~--- 326 (383)
T COG0381 263 RVKLIDPLGYLDFHN------LM--KNAFLILTDSG-GIQEEAPSLGKPVLVLRDTTERPE----GVEAGTNILVGT--- 326 (383)
T ss_pred cEEEeCCcchHHHHH------HH--HhceEEEecCC-chhhhHHhcCCcEEeeccCCCCcc----ceecCceEEeCc---
Confidence 455544 556666 77 67889998887 455699999999999977777776 344555555543
Q ss_pred CHHHHHHHHHHHhcCcccc
Q psy10598 99 DYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 99 ~~~~l~~~i~~~l~~~~~~ 117 (119)
+.+.+.+++.+++++++..
T Consensus 327 ~~~~i~~~~~~ll~~~~~~ 345 (383)
T COG0381 327 DEENILDAATELLEDEEFY 345 (383)
T ss_pred cHHHHHHHHHHHhhChHHH
Confidence 6788999999999886544
No 118
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=92.71 E-value=0.14 Score=43.54 Aligned_cols=84 Identities=12% Similarity=0.013 Sum_probs=54.3
Q ss_pred CCCCEEEEeec-cCCcccccccccc--CCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCcee
Q psy10598 19 HGYNILVFGVF-PFTSHFRKCYYIP--HPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGL 91 (119)
Q Consensus 19 l~~nv~~~~~~-p~~~~~~~~~ll~--~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~ 91 (119)
+.++|.+.++. +..+ .. .++. ...+|+||.- +-..+++||+++|+|+|+.... .....+.+-..|.
T Consensus 617 L~g~V~flG~~~~~~~-~~--elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~dg~tGf 689 (784)
T TIGR02470 617 LHGQIRWIGAQLNRVR-NG--ELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQDGVSGF 689 (784)
T ss_pred CCCeEEEccCcCCccc-HH--HHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcCCCcEE
Confidence 45778887764 3211 00 0221 1245677743 2247999999999999996543 3445566666798
Q ss_pred EecCCCCCHHHHHHHHHHHh
Q psy10598 92 MVDFDVFDYEELRRKVHQVL 111 (119)
Q Consensus 92 ~l~~~~~~~~~l~~~i~~~l 111 (119)
.+++. ++++++++|.+++
T Consensus 690 LVdp~--D~eaLA~aL~~ll 707 (784)
T TIGR02470 690 HIDPY--HGEEAAEKIVDFF 707 (784)
T ss_pred EeCCC--CHHHHHHHHHHHH
Confidence 88765 6788999988775
No 119
>PHA01630 putative group 1 glycosyl transferase
Probab=92.63 E-value=0.1 Score=39.67 Aligned_cols=67 Identities=16% Similarity=0.200 Sum_probs=41.4
Q ss_pred CCeeEEEE---cCC-hhHHHHHHHhCCCEEEccCcc--cHHHHH---HHHH-----------HcCceeEecCCCCCHHHH
Q psy10598 44 PKCRLFIT---HGG-VHSAFESIYHAVPMVIVPLFA--DQKQNG---QKAE-----------EEGYGLMVDFDVFDYEEL 103 (119)
Q Consensus 44 ~~~~~~I~---hgG-~~t~~eal~~g~P~i~~P~~~--dQ~~na---~~~~-----------~~G~g~~l~~~~~~~~~l 103 (119)
..+|+++. ..| ..+++||+++|+|+|+....+ |...+. -.+. ..++|..+++ +.+++
T Consensus 208 ~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~---~~~~~ 284 (331)
T PHA01630 208 AGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP---DIEDA 284 (331)
T ss_pred HhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC---CHHHH
Confidence 78888883 222 578999999999999975432 322211 0000 0234555443 56778
Q ss_pred HHHHHHHhcC
Q psy10598 104 RRKVHQVLYE 113 (119)
Q Consensus 104 ~~~i~~~l~~ 113 (119)
.+++.+++.+
T Consensus 285 ~~~ii~~l~~ 294 (331)
T PHA01630 285 YQKLLEALAN 294 (331)
T ss_pred HHHHHHHHhC
Confidence 8888787766
No 120
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=92.56 E-value=0.14 Score=39.28 Aligned_cols=77 Identities=16% Similarity=0.237 Sum_probs=50.5
Q ss_pred CCEEEEeeccC---CccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCC
Q psy10598 21 YNILVFGVFPF---TSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDV 97 (119)
Q Consensus 21 ~nv~~~~~~p~---~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~ 97 (119)
+|+.+.+-++. .. +| ..|+++|+-.| |-.-||.++|+|.|.+=..++... ....|..+.+.
T Consensus 239 ~~v~~~~~l~~~~~l~------ll--~~a~~vvgdSs-GI~eEa~~lg~P~v~iR~~geRqe----~r~~~~nvlv~--- 302 (346)
T PF02350_consen 239 DNVRLIEPLGYEEYLS------LL--KNADLVVGDSS-GIQEEAPSLGKPVVNIRDSGERQE----GRERGSNVLVG--- 302 (346)
T ss_dssp TTEEEE----HHHHHH------HH--HHESEEEESSH-HHHHHGGGGT--EEECSSS-S-HH----HHHTTSEEEET---
T ss_pred CCEEEECCCCHHHHHH------HH--hcceEEEEcCc-cHHHHHHHhCCeEEEecCCCCCHH----HHhhcceEEeC---
Confidence 48888876654 34 66 78999999998 444499999999999943333322 33456666654
Q ss_pred CCHHHHHHHHHHHhcC
Q psy10598 98 FDYEELRRKVHQVLYE 113 (119)
Q Consensus 98 ~~~~~l~~~i~~~l~~ 113 (119)
.+.+++.+++++++++
T Consensus 303 ~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 303 TDPEAIIQAIEKALSD 318 (346)
T ss_dssp SSHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHHHHhC
Confidence 4799999999999976
No 121
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=92.53 E-value=0.24 Score=40.89 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=49.0
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEcc-CcccHHHHHHHHHHc-----C-----ceeE-----ec-CCCCCHHH
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIVP-LFADQKQNGQKAEEE-----G-----YGLM-----VD-FDVFDYEE 102 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P-~~~dQ~~na~~~~~~-----G-----~g~~-----l~-~~~~~~~~ 102 (119)
++ ..||+.+.-.|.-|+ |++..|+|++++= ...=-..-++++.+. + +|.. +. .+++++++
T Consensus 485 ~m--~aaD~aLaaSGTaTL-EaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~ 561 (608)
T PRK01021 485 LM--RECDCALAKCGTIVL-ETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEE 561 (608)
T ss_pred HH--HhcCeeeecCCHHHH-HHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHH
Confidence 66 789999999996555 9999999999972 222223345555541 1 1222 21 24678999
Q ss_pred HHHHHHHHhcCcccc
Q psy10598 103 LRRKVHQVLYEPKYV 117 (119)
Q Consensus 103 l~~~i~~~l~~~~~~ 117 (119)
+.+++ +++.|++++
T Consensus 562 La~~l-~lL~d~~~r 575 (608)
T PRK01021 562 VAAAL-DILKTSQSK 575 (608)
T ss_pred HHHHH-HHhcCHHHH
Confidence 99996 777777554
No 122
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=92.49 E-value=0.13 Score=40.36 Aligned_cols=86 Identities=10% Similarity=0.039 Sum_probs=52.9
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCc--ccHHHHHHHHHHcCceeEe
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLF--ADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~--~dQ~~na~~~~~~G~g~~l 93 (119)
++|+.+....+.... ..++ ..+|+++.- |-..+.+||+++|+|.|+.... .|...+.....+.|.|..+
T Consensus 350 ~~~v~~~~~~~~~~~---~~~~--~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~ 424 (476)
T cd03791 350 PGRVAVLIGYDEALA---HLIY--AGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF 424 (476)
T ss_pred CCcEEEEEeCCHHHH---HHHH--HhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe
Confidence 677776554443210 0145 678998843 2236789999999999986543 2211111111134578888
Q ss_pred cCCCCCHHHHHHHHHHHhc
Q psy10598 94 DFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~ 112 (119)
... +++++.+++.+++.
T Consensus 425 ~~~--~~~~l~~~i~~~l~ 441 (476)
T cd03791 425 EGY--NADALLAALRRALA 441 (476)
T ss_pred CCC--CHHHHHHHHHHHHH
Confidence 754 68889999988764
No 123
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=92.47 E-value=0.25 Score=38.43 Aligned_cols=74 Identities=16% Similarity=0.186 Sum_probs=51.3
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEc-cCcccHHHHHHHHHHcCc--------eeEe----cCCCCCHHHHHHH
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIV-PLFADQKQNGQKAEEEGY--------GLMV----DFDVFDYEELRRK 106 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~-P~~~dQ~~na~~~~~~G~--------g~~l----~~~~~~~~~l~~~ 106 (119)
++ ..||+.+.-.|.- ++|+...|+|++++ -...=...-++++.+... |..+ -.++++++.+.++
T Consensus 257 ~m--~~ad~al~~SGTa-TLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~ 333 (373)
T PF02684_consen 257 AM--AAADAALAASGTA-TLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAE 333 (373)
T ss_pred HH--HhCcchhhcCCHH-HHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHH
Confidence 56 6899988888854 45999999999997 333334456666655432 1111 1256789999999
Q ss_pred HHHHhcCccc
Q psy10598 107 VHQVLYEPKY 116 (119)
Q Consensus 107 i~~~l~~~~~ 116 (119)
+.+++.|++.
T Consensus 334 ~~~ll~~~~~ 343 (373)
T PF02684_consen 334 LLELLENPEK 343 (373)
T ss_pred HHHHhcCHHH
Confidence 9999988754
No 124
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=92.26 E-value=0.15 Score=39.30 Aligned_cols=77 Identities=18% Similarity=0.204 Sum_probs=49.7
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeE-ecCCCC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLM-VDFDVF 98 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~-l~~~~~ 98 (119)
.+|+.+.+-++..+. -.++ ..|+++|+-++.+. .||.+.|+|.|.+- +. ....+.|..+. +. .
T Consensus 261 ~~~v~l~~~l~~~~~---l~Ll--~~a~~vitdSSggi-~EA~~lg~Pvv~l~---~R----~e~~~~g~nvl~vg---~ 324 (365)
T TIGR03568 261 HPNFRLFKSLGQERY---LSLL--KNADAVIGNSSSGI-IEAPSFGVPTINIG---TR----QKGRLRADSVIDVD---P 324 (365)
T ss_pred CCCEEEECCCChHHH---HHHH--HhCCEEEEcChhHH-HhhhhcCCCEEeec---CC----chhhhhcCeEEEeC---C
Confidence 357888775543320 0156 78999999876555 89999999999873 21 11223344433 43 3
Q ss_pred CHHHHHHHHHHHhc
Q psy10598 99 DYEELRRKVHQVLY 112 (119)
Q Consensus 99 ~~~~l~~~i~~~l~ 112 (119)
+++++.+++.+++.
T Consensus 325 ~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 325 DKEEIVKAIEKLLD 338 (365)
T ss_pred CHHHHHHHHHHHhC
Confidence 68899999998553
No 125
>PRK10125 putative glycosyl transferase; Provisional
Probab=92.13 E-value=0.68 Score=36.11 Aligned_cols=77 Identities=12% Similarity=0.031 Sum_probs=47.3
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcC----ChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHG----GVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hg----G~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~ 95 (119)
+.++...++.+.... -..++ .++|+||.-. -..+++||+++|+|+|.....+ ..+.+. .+.|..+++
T Consensus 285 ~~~v~~~g~~~~~~~--l~~~y--~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv~-~~~G~lv~~ 355 (405)
T PRK10125 285 AGNVVNHGFETDKRK--LMSAL--NQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDA----AREVLQ-KSGGKTVSE 355 (405)
T ss_pred ccceEEecCcCCHHH--HHHHH--HhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHHhEe-CCcEEEECC
Confidence 456666666543210 01144 6789988533 2488999999999999987654 122232 246888876
Q ss_pred CCCCHHHHHHHH
Q psy10598 96 DVFDYEELRRKV 107 (119)
Q Consensus 96 ~~~~~~~l~~~i 107 (119)
. +.++|++.+
T Consensus 356 ~--d~~~La~~~ 365 (405)
T PRK10125 356 E--EVLQLAQLS 365 (405)
T ss_pred C--CHHHHHhcc
Confidence 5 456666544
No 126
>PRK00654 glgA glycogen synthase; Provisional
Probab=91.97 E-value=0.11 Score=41.00 Aligned_cols=69 Identities=14% Similarity=0.118 Sum_probs=45.4
Q ss_pred cccCCCeeEEEEc---CC-hhHHHHHHHhCCCEEEccCc--ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10598 40 YIPHPKCRLFITH---GG-VHSAFESIYHAVPMVIVPLF--ADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 40 ll~~~~~~~~I~h---gG-~~t~~eal~~g~P~i~~P~~--~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 112 (119)
++ ..+|+++.- -| ..+.+||+++|+|.|+.... .|...+...-.+.+.|..+++. +++++.++|.+++.
T Consensus 353 ~~--~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~--d~~~la~~i~~~l~ 427 (466)
T PRK00654 353 IY--AGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDF--NAEDLLRALRRALE 427 (466)
T ss_pred HH--hhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCC--CHHHHHHHHHHHHH
Confidence 55 789999853 23 36899999999999986432 2211111001223678888754 67889999988765
No 127
>PLN02939 transferase, transferring glycosyl groups
Probab=91.34 E-value=0.29 Score=42.39 Aligned_cols=87 Identities=10% Similarity=0.016 Sum_probs=55.5
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCcc--cHHHH--HHHH-HHcCc
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLFA--DQKQN--GQKA-EEEGY 89 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~~--dQ~~n--a~~~-~~~G~ 89 (119)
++++|.+.++++.... ..++ +.+|+|+.- +-..+.+||+++|+|.|+....+ |...+ ...+ ...+.
T Consensus 835 l~drV~FlG~~de~la---h~IY--AaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~N 909 (977)
T PLN02939 835 SNNNIRLILKYDEALS---HSIY--AASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRN 909 (977)
T ss_pred CCCeEEEEeccCHHHH---HHHH--HhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCc
Confidence 3568988888775310 0056 789999953 22478999999999999875532 22211 1111 12356
Q ss_pred eeEecCCCCCHHHHHHHHHHHhc
Q psy10598 90 GLMVDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 90 g~~l~~~~~~~~~l~~~i~~~l~ 112 (119)
|..+... +++++.++|.+++.
T Consensus 910 GfLf~~~--D~eaLa~AL~rAL~ 930 (977)
T PLN02939 910 GFTFLTP--DEQGLNSALERAFN 930 (977)
T ss_pred eEEecCC--CHHHHHHHHHHHHH
Confidence 8777643 78888888887764
No 128
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=91.09 E-value=0.86 Score=36.07 Aligned_cols=69 Identities=16% Similarity=0.198 Sum_probs=52.3
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeE-ecCCCCCHHHHHHHHHHHhcCc
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLM-VDFDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~~i~~~l~~~ 114 (119)
++ .++|++|..==+. +.-|+..|+|.+.+++ | +.....+++.|.... ++.++++.++|.+.+.+++++.
T Consensus 324 iI--s~~dl~ig~RlHa-~I~a~~~gvP~i~i~Y--~-~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r 393 (426)
T PRK10017 324 IL--GACELTVGTRLHS-AIISMNFGTPAIAINY--E-HKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQL 393 (426)
T ss_pred HH--hhCCEEEEecchH-HHHHHHcCCCEEEeee--h-HHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCH
Confidence 66 7889999764444 4467889999999987 2 444455688887755 6778888999999999998763
No 129
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=90.34 E-value=0.75 Score=32.46 Aligned_cols=84 Identities=21% Similarity=0.309 Sum_probs=51.6
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEc---CCh-hHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITH---GGV-HSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~h---gG~-~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~ 95 (119)
.+++.+.+++|.... ..++ ..+++++.- .|. .++.|++++|+|+|..... ...+.+.+.+.|.....
T Consensus 256 ~~~v~~~g~~~~~~~---~~~~--~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~~~~g~~~~~ 326 (381)
T COG0438 256 EDNVKFLGYVPDEEL---AELL--ASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVEDGETGLLVPP 326 (381)
T ss_pred CCcEEEecccCHHHH---HHHH--HhCCEEEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcCCCceEecCC
Confidence 467888888882210 0044 556777755 244 4569999999999886543 22223333324553332
Q ss_pred CCCCHHHHHHHHHHHhcCc
Q psy10598 96 DVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 96 ~~~~~~~l~~~i~~~l~~~ 114 (119)
. +.+++.+++..+++++
T Consensus 327 ~--~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 327 G--DVEELADALEQLLEDP 343 (381)
T ss_pred C--CHHHHHHHHHHHhcCH
Confidence 2 6788999998888765
No 130
>PRK14099 glycogen synthase; Provisional
Probab=90.07 E-value=0.28 Score=39.20 Aligned_cols=70 Identities=10% Similarity=0.080 Sum_probs=43.0
Q ss_pred CCeeEEEEc---CC-hhHHHHHHHhCCCEEEccCc--ccHHHHHHH-HHH--cCceeEecCCCCCHHHHHHHHHH---Hh
Q psy10598 44 PKCRLFITH---GG-VHSAFESIYHAVPMVIVPLF--ADQKQNGQK-AEE--EGYGLMVDFDVFDYEELRRKVHQ---VL 111 (119)
Q Consensus 44 ~~~~~~I~h---gG-~~t~~eal~~g~P~i~~P~~--~dQ~~na~~-~~~--~G~g~~l~~~~~~~~~l~~~i~~---~l 111 (119)
+.+|+|+.- -| ..+.+||+++|+|.|+.... .|...+... .+. .+.|..+++. ++++|.++|.+ ++
T Consensus 368 a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~--d~~~La~ai~~a~~l~ 445 (485)
T PRK14099 368 AGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPV--TADALAAALRKTAALF 445 (485)
T ss_pred hcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCC--CHHHHHHHHHHHHHHh
Confidence 468998852 23 46889999999877765432 232222111 111 1568887754 68899999987 45
Q ss_pred cCcc
Q psy10598 112 YEPK 115 (119)
Q Consensus 112 ~~~~ 115 (119)
.|++
T Consensus 446 ~d~~ 449 (485)
T PRK14099 446 ADPV 449 (485)
T ss_pred cCHH
Confidence 5543
No 131
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=89.80 E-value=1.2 Score=35.53 Aligned_cols=62 Identities=16% Similarity=0.222 Sum_probs=44.3
Q ss_pred CCeeEEEE---cCCh-hHHHHHHHhCCC----EEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCc
Q psy10598 44 PKCRLFIT---HGGV-HSAFESIYHAVP----MVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 44 ~~~~~~I~---hgG~-~t~~eal~~g~P----~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 114 (119)
..+|+++. +-|. .++.|++++|+| +|+--..+-. ..+ +.|..+++. +.++++++|.++++.+
T Consensus 354 ~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l---~~gllVnP~--d~~~lA~aI~~aL~~~ 423 (456)
T TIGR02400 354 RAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL---NGALLVNPY--DIDGMADAIARALTMP 423 (456)
T ss_pred HhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh---CCcEEECCC--CHHHHHHHHHHHHcCC
Confidence 78999985 4454 788899999999 6665443322 122 247777764 6889999999998754
No 132
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=89.70 E-value=1.2 Score=33.15 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=24.5
Q ss_pred CCeeEEEEcCChhHHHHHHH------hCCCEEEcc
Q psy10598 44 PKCRLFITHGGVHSAFESIY------HAVPMVIVP 72 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~------~g~P~i~~P 72 (119)
..+|++|+-||=||++.++. .++|++.+-
T Consensus 34 ~~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN 68 (265)
T PRK04885 34 KNPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVH 68 (265)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEe
Confidence 35799999999999999986 478888874
No 133
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=89.47 E-value=0.33 Score=38.55 Aligned_cols=80 Identities=14% Similarity=0.222 Sum_probs=50.0
Q ss_pred CCEEE-Eeecc-CCccccccccccCCCeeE--EEEcCC--hhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 21 YNILV-FGVFP-FTSHFRKCYYIPHPKCRL--FITHGG--VHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 21 ~nv~~-~~~~p-~~~~~~~~~ll~~~~~~~--~I~hgG--~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
+|+.+ .++.+ .... ++ ..|++ -|+||. ..++.||+.+|+|++..=... .+...+.. |-++.
T Consensus 328 ~nvvly~~~~~~~l~~-----ly--~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~---~~~~~i~~---g~l~~ 394 (438)
T TIGR02919 328 DNVKLYPNITTQKIQE-----LY--QTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETA---HNRDFIAS---ENIFE 394 (438)
T ss_pred CCcEEECCcChHHHHH-----HH--HhccEEEEccccccHHHHHHHHHHcCCcEEEEeccc---CCcccccC---Cceec
Confidence 44444 44456 3332 67 45555 457766 499999999999999963321 11122222 44444
Q ss_pred CCCCCHHHHHHHHHHHhcCcc
Q psy10598 95 FDVFDYEELRRKVHQVLYEPK 115 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~~ 115 (119)
.. +.+++.++|.++|.+++
T Consensus 395 ~~--~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 395 HN--EVDQLISKLKDLLNDPN 413 (438)
T ss_pred CC--CHHHHHHHHHHHhcCHH
Confidence 33 68899999999998863
No 134
>PLN02316 synthase/transferase
Probab=88.81 E-value=0.84 Score=40.05 Aligned_cols=85 Identities=9% Similarity=-0.029 Sum_probs=54.3
Q ss_pred CCCCEEEEeeccCC---ccccccccccCCCeeEEEEc----CChhHHHHHHHhCCCEEEccCc--ccHHHHH-------H
Q psy10598 19 HGYNILVFGVFPFT---SHFRKCYYIPHPKCRLFITH----GGVHSAFESIYHAVPMVIVPLF--ADQKQNG-------Q 82 (119)
Q Consensus 19 l~~nv~~~~~~p~~---~~~~~~~ll~~~~~~~~I~h----gG~~t~~eal~~g~P~i~~P~~--~dQ~~na-------~ 82 (119)
.++++.+...++.. . ++ +.+|+|+.- +-..+.+||+++|+|.|+-... .|..... +
T Consensus 898 ~~~rV~f~g~~de~lah~------iy--aaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~ 969 (1036)
T PLN02316 898 HHDRARLCLTYDEPLSHL------IY--AGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQ 969 (1036)
T ss_pred CCCeEEEEecCCHHHHHH------HH--HhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccccc
Confidence 35677776655443 2 55 889999943 3347899999999998886443 2222211 1
Q ss_pred HHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 83 KAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 83 ~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
.....+.|..+... +++.|..+|.+++.+
T Consensus 970 ~~g~~~tGflf~~~--d~~aLa~AL~raL~~ 998 (1036)
T PLN02316 970 AQGLEPNGFSFDGA--DAAGVDYALNRAISA 998 (1036)
T ss_pred ccccCCceEEeCCC--CHHHHHHHHHHHHhh
Confidence 00112568877643 688899999888764
No 135
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=88.17 E-value=1.8 Score=32.87 Aligned_cols=54 Identities=17% Similarity=0.293 Sum_probs=37.3
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+=||=||++.++.. ++|++.+-.. .+|.. .+.+++++.+++.+++++
T Consensus 67 ~~~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~G-------------~lGFL---t~~~~~~~~~~l~~l~~g 124 (305)
T PRK02649 67 SSMKFAIVLGGDGTVLSAARQLAPCGIPLLTINTG-------------HLGFL---TEAYLNQLDEAIDQVLAG 124 (305)
T ss_pred cCcCEEEEEeCcHHHHHHHHHhcCCCCcEEEEeCC-------------CCccc---ccCCHHHHHHHHHHHHcC
Confidence 368999999999999999864 7798887431 12322 233566677777777644
No 136
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=87.91 E-value=1.6 Score=35.99 Aligned_cols=69 Identities=13% Similarity=0.112 Sum_probs=41.9
Q ss_pred CCeeEEEE---cCC-hhHHHHHHHhCCCEEEccCcc-cHHHHHHHHHHc-CceeEecCCC-----CCHHHHHHHHHHHhc
Q psy10598 44 PKCRLFIT---HGG-VHSAFESIYHAVPMVIVPLFA-DQKQNGQKAEEE-GYGLMVDFDV-----FDYEELRRKVHQVLY 112 (119)
Q Consensus 44 ~~~~~~I~---hgG-~~t~~eal~~g~P~i~~P~~~-dQ~~na~~~~~~-G~g~~l~~~~-----~~~~~l~~~i~~~l~ 112 (119)
..||++|. +-| .-+++||+++|+|+|.....+ ..... +.+... ..|+.+...+ -+.++|.+++.+++.
T Consensus 473 ~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~ 551 (590)
T cd03793 473 RGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQ 551 (590)
T ss_pred hhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhC
Confidence 78999886 334 479999999999999976531 11111 122222 2566664211 135677777777774
Q ss_pred C
Q psy10598 113 E 113 (119)
Q Consensus 113 ~ 113 (119)
.
T Consensus 552 ~ 552 (590)
T cd03793 552 L 552 (590)
T ss_pred C
Confidence 3
No 137
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=87.14 E-value=2.4 Score=31.87 Aligned_cols=54 Identities=9% Similarity=0.080 Sum_probs=36.1
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+-||=||++.++.. ++|++.+-... +|.. .+.+++++.+++.++++.
T Consensus 63 ~~~Dlvi~iGGDGT~L~aa~~~~~~~~PilGIN~G~-------------lGFL---t~~~~~~~~~~l~~i~~g 120 (287)
T PRK14077 63 KISDFLISLGGDGTLISLCRKAAEYDKFVLGIHAGH-------------LGFL---TDITVDEAEKFFQAFFQG 120 (287)
T ss_pred cCCCEEEEECCCHHHHHHHHHhcCCCCcEEEEeCCC-------------cccC---CcCCHHHHHHHHHHHHcC
Confidence 468999999999999988753 67888774310 2322 233566666677666643
No 138
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=86.92 E-value=2.6 Score=31.68 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=24.2
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEcc
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVP 72 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P 72 (119)
..+|++|+-||=||+++++.. ++|++.+-
T Consensus 62 ~~~d~vi~~GGDGt~l~~~~~~~~~~~pilGIn 94 (291)
T PRK02155 62 ARADLAVVLGGDGTMLGIGRQLAPYGVPLIGIN 94 (291)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEc
Confidence 358999999999999999863 67888764
No 139
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=85.70 E-value=2.6 Score=31.97 Aligned_cols=54 Identities=24% Similarity=0.354 Sum_probs=38.1
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+=||=||++.+... ++|++.+... .+|... +.+++++.+++.++++.
T Consensus 71 ~~~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G-------------~lGFL~---~~~~~~~~~~l~~i~~g 128 (306)
T PRK03372 71 DGCELVLVLGGDGTILRAAELARAADVPVLGVNLG-------------HVGFLA---EAEAEDLDEAVERVVDR 128 (306)
T ss_pred cCCCEEEEEcCCHHHHHHHHHhccCCCcEEEEecC-------------CCceec---cCCHHHHHHHHHHHHcC
Confidence 468999999999999999764 7898888541 133332 23566777777777644
No 140
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=85.68 E-value=0.67 Score=33.90 Aligned_cols=41 Identities=10% Similarity=0.286 Sum_probs=31.7
Q ss_pred CEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEc
Q psy10598 22 NILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIV 71 (119)
Q Consensus 22 nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~ 71 (119)
.+.+.+-.+-.+ ++ ..|+.+||-.+. +-+||+.+|+|++++
T Consensus 184 ~~~~~~~~~~~~------Ll--~~s~~VvtinSt-vGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 184 VVIIDDDVNLYE------LL--EQSDAVVTINST-VGLEALLHGKPVIVF 224 (269)
T ss_pred eEEECCCCCHHH------HH--HhCCEEEEECCH-HHHHHHHcCCceEEe
Confidence 344444455556 88 889999999874 667999999999997
No 141
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=85.66 E-value=3.1 Score=31.43 Aligned_cols=76 Identities=13% Similarity=0.218 Sum_probs=46.7
Q ss_pred eccCCccccccccccCCCeeEEEEcC-ChhHHHHHHHhCCCEEEc--cCc-ccH-HHHHHHHHHcCceeEecCCC-----
Q psy10598 28 VFPFTSHFRKCYYIPHPKCRLFITHG-GVHSAFESIYHAVPMVIV--PLF-ADQ-KQNGQKAEEEGYGLMVDFDV----- 97 (119)
Q Consensus 28 ~~p~~~~~~~~~ll~~~~~~~~I~hg-G~~t~~eal~~g~P~i~~--P~~-~dQ-~~na~~~~~~G~g~~l~~~~----- 97 (119)
+=|..+ +| +++|.+|+-. ..+.+.||++.|+|+.+. |.+ .+. ..--+.+++.++++..+.+.
T Consensus 235 ~NPY~~------~L--a~Adyii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~~~~~~~e~ 306 (329)
T COG3660 235 YNPYID------ML--AAADYIISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVEQKIARPFEGSNLALEE 306 (329)
T ss_pred CCchHH------HH--hhcceEEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHHhhhccccCcchhhhcc
Confidence 335666 77 7888877555 468899999999999876 443 222 22334455566666554321
Q ss_pred -----C-CHHHHHHHHHHHh
Q psy10598 98 -----F-DYEELRRKVHQVL 111 (119)
Q Consensus 98 -----~-~~~~l~~~i~~~l 111 (119)
+ ..+++++.|+..+
T Consensus 307 ysy~PLnEt~RiA~~Ira~l 326 (329)
T COG3660 307 YSYKPLNETERIAEEIRAEL 326 (329)
T ss_pred cccCCchHHHHHHHHHHHHh
Confidence 1 1456666666554
No 142
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=85.52 E-value=2.9 Score=31.47 Aligned_cols=54 Identities=15% Similarity=0.289 Sum_probs=37.4
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+=||=||++.++.. ++|++.+-... +|.. .+.+++++.+++.+++++
T Consensus 63 ~~~dlvi~lGGDGT~L~aa~~~~~~~~PilGIN~G~-------------lGFL---t~~~~~~~~~~l~~i~~g 120 (292)
T PRK01911 63 GSADMVISIGGDGTFLRTATYVGNSNIPILGINTGR-------------LGFL---ATVSKEEIEETIDELLNG 120 (292)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEecCC-------------CCcc---cccCHHHHHHHHHHHHcC
Confidence 368999999999999999873 77888874311 2322 234566777777777644
No 143
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=85.39 E-value=3.1 Score=31.04 Aligned_cols=53 Identities=15% Similarity=0.227 Sum_probs=36.1
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 112 (119)
..+|++|+=||=||++.++.. ++|++.+-.. ..|... +.+++++.+.+.+++.
T Consensus 41 ~~~d~vi~iGGDGT~L~aa~~~~~~~~PilgIn~G-------------~lGFL~---~~~~~~~~~~l~~~~~ 97 (272)
T PRK02231 41 QRAQLAIVIGGDGNMLGRARVLAKYDIPLIGINRG-------------NLGFLT---DIDPKNAYEQLEACLE 97 (272)
T ss_pred cCCCEEEEECCcHHHHHHHHHhccCCCcEEEEeCC-------------CCcccc---cCCHHHHHHHHHHHHh
Confidence 468999999999999988653 6788877431 133332 2356666677776665
No 144
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=84.71 E-value=5.3 Score=30.18 Aligned_cols=54 Identities=22% Similarity=0.275 Sum_probs=37.0
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+=||=||++.++.. ++|++.+-.. .+|... +.+++++.+++.+++++
T Consensus 67 ~~~D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G-------------~lGFL~---~~~~~~~~~~l~~i~~g 124 (296)
T PRK04539 67 QYCDLVAVLGGDGTFLSVAREIAPRAVPIIGINQG-------------HLGFLT---QIPREYMTDKLLPVLEG 124 (296)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcccCCCEEEEecC-------------CCeEee---ccCHHHHHHHHHHHHcC
Confidence 368999999999999999753 7898887431 134332 23566677777766643
No 145
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=83.80 E-value=4.2 Score=30.21 Aligned_cols=55 Identities=11% Similarity=0.239 Sum_probs=37.0
Q ss_pred CCeeEEEEcCChhHHHHHHHh-----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH-----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~-----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+=||=||++.++.. .+|++.+-..+ ..|.. .+.+.+++.+++.+++++
T Consensus 38 ~~~D~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G------------~lGFL---~~~~~~~~~~~l~~i~~g 97 (264)
T PRK03501 38 KNANIIVSIGGDGTFLQAVRKTGFREDCLYAGISTKD------------QLGFY---CDFHIDDLDKMIQAITKE 97 (264)
T ss_pred CCccEEEEECCcHHHHHHHHHhcccCCCeEEeEecCC------------CCeEc---ccCCHHHHHHHHHHHHcC
Confidence 457999999999999999874 55666654311 23433 234667777777777643
No 146
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=83.77 E-value=3.7 Score=30.63 Aligned_cols=53 Identities=15% Similarity=0.376 Sum_probs=37.4
Q ss_pred CeeEEEEcCChhHHHHHHHh-CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 45 KCRLFITHGGVHSAFESIYH-AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~-g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
.+|++|+=||-||++.++.. ..|++.+-.. ..|.. .+.+++++.+++.+++++
T Consensus 52 ~~D~vi~lGGDGT~L~a~~~~~~PilGIN~G-------------~lGFL---~~~~~~~~~~~l~~i~~g 105 (271)
T PRK01185 52 NADVIITIGGDGTILRTLQRAKGPILGINMG-------------GLGFL---TEIEIDEVGSAIKKLIRG 105 (271)
T ss_pred CCCEEEEEcCcHHHHHHHHHcCCCEEEEECC-------------CCccC---cccCHHHHHHHHHHHHcC
Confidence 58999999999999999873 5677766321 12332 234677888888888754
No 147
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=83.13 E-value=3.2 Score=31.01 Aligned_cols=29 Identities=14% Similarity=0.308 Sum_probs=24.3
Q ss_pred CeeEEEEcCChhHHHHHHHh---CCCEEEccC
Q psy10598 45 KCRLFITHGGVHSAFESIYH---AVPMVIVPL 73 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~---g~P~i~~P~ 73 (119)
.+|++|+-||-||+++++.. ++|++.+|.
T Consensus 57 ~~d~vi~iGGDGTlL~a~~~~~~~~pi~gIn~ 88 (277)
T PRK03708 57 DVDFIIAIGGDGTILRIEHKTKKDIPILGINM 88 (277)
T ss_pred CCCEEEEEeCcHHHHHHHHhcCCCCeEEEEeC
Confidence 68999999999999999843 568888875
No 148
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=82.64 E-value=4.2 Score=30.64 Aligned_cols=54 Identities=15% Similarity=0.191 Sum_probs=36.8
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+=||=||++.++.. ++|++.+-... +|.. .+++++++.++++++++.
T Consensus 62 ~~~d~vi~lGGDGT~L~aa~~~~~~~~Pilgin~G~-------------lGFl---~~~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 62 QQADLAIVVGGDGNMLGAARVLARYDIKVIGINRGN-------------LGFL---TDLDPDNALQQLSDVLEG 119 (292)
T ss_pred CCCCEEEEECCcHHHHHHHHHhcCCCCeEEEEECCC-------------CCcc---cccCHHHHHHHHHHHHcC
Confidence 468999999999999999852 67877764311 2332 233567777777777643
No 149
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=82.34 E-value=5.4 Score=29.40 Aligned_cols=54 Identities=19% Similarity=0.251 Sum_probs=37.5
Q ss_pred CCeeEEEEcCChhHHHHHHH-hCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIY-HAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~-~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+=||=||++.++. .++|++.+-... .|... +.+.+++.+++.++++.
T Consensus 40 ~~~d~vi~iGGDGT~L~a~~~~~~Pilgin~G~-------------lGfl~---~~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 40 VTADLIIVVGGDGTVLKAAKKVGTPLVGFKAGR-------------LGFLS---SYTLEEIDRFLEDLKNW 94 (256)
T ss_pred CCCCEEEEECCcHHHHHHHHHcCCCEEEEeCCC-------------Ccccc---ccCHHHHHHHHHHHHcC
Confidence 57899999999999999985 578887764211 33332 34567777777776643
No 150
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.19 E-value=5.1 Score=30.97 Aligned_cols=83 Identities=14% Similarity=0.213 Sum_probs=50.0
Q ss_pred EEeeccCCccccccccccCCCeeEEEEcCChhHHHH---------------HHHhCCCEEEccCcccHHH--HHHHHHH-
Q psy10598 25 VFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFE---------------SIYHAVPMVIVPLFADQKQ--NGQKAEE- 86 (119)
Q Consensus 25 ~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~e---------------al~~g~P~i~~P~~~dQ~~--na~~~~~- 86 (119)
..+|-|..+ ++....|.+..+.-..++++. ++-.|+|+|.+|-.+-|+. -|++-.+
T Consensus 281 ~~gWq~~ad------~~~kdnc~l~lsqqsfadiLH~adaalgmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rL 354 (412)
T COG4370 281 RQGWQPLAD------RFGKDNCSLWLSQQSFADILHAADAALGMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRL 354 (412)
T ss_pred hcCcchhhh------hhccCceEEEEeHHHHHHHHHHHHHHHHhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHH
Confidence 456666665 554446666666554444433 3456999999999888864 4444443
Q ss_pred cCceeEecCCCCCHHHHHHHHHH-HhcCccc
Q psy10598 87 EGYGLMVDFDVFDYEELRRKVHQ-VLYEPKY 116 (119)
Q Consensus 87 ~G~g~~l~~~~~~~~~l~~~i~~-~l~~~~~ 116 (119)
.|..+.+..+ +....+.+.+ ++.|+.+
T Consensus 355 LG~sltlv~~---~aq~a~~~~q~ll~dp~r 382 (412)
T COG4370 355 LGASLTLVRP---EAQAAAQAVQELLGDPQR 382 (412)
T ss_pred hcceeeecCC---chhhHHHHHHHHhcChHH
Confidence 6888776543 2333444444 7777654
No 151
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=81.28 E-value=6.2 Score=29.74 Aligned_cols=54 Identities=26% Similarity=0.314 Sum_probs=39.0
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+=||=||+++++.. ++|++.+... ..|.. .+.+++++.+++.++++.
T Consensus 61 ~~~d~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G-------------~lGFl---~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 61 EVCDLVIVVGGDGSLLGAARALARHNVPVLGINRG-------------RLGFL---TDIRPDELEFKLAEVLDG 118 (295)
T ss_pred cCCCEEEEEeCcHHHHHHHHHhcCCCCCEEEEeCC-------------ccccc---ccCCHHHHHHHHHHHHcC
Confidence 358999999999999999753 6788887541 13322 245678888888888754
No 152
>PLN02929 NADH kinase
Probab=81.23 E-value=4.8 Score=30.58 Aligned_cols=66 Identities=14% Similarity=0.249 Sum_probs=43.9
Q ss_pred CCeeEEEEcCChhHHHHHHHh---CCCEEEccCcc------cHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH---AVPMVIVPLFA------DQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~---g~P~i~~P~~~------dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+-||=||++.+... ++|++.+-... .+..|.-. +....|.... .+.+++.+.+.++++.
T Consensus 63 ~~~Dlvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~r~lGfL~~---~~~~~~~~~L~~il~g 137 (301)
T PLN02929 63 RDVDLVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFD-ARRSTGHLCA---ATAEDFEQVLDDVLFG 137 (301)
T ss_pred CCCCEEEEECCcHHHHHHHHHcCCCCcEEEEECCCcccccccccccccc-cccCcccccc---CCHHHHHHHHHHHHcC
Confidence 678999999999999998653 68998884421 12222211 2223555433 3678888999988854
No 153
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=79.47 E-value=1.8 Score=34.38 Aligned_cols=64 Identities=16% Similarity=0.221 Sum_probs=43.0
Q ss_pred cccCCCeeEEEE---cCCh-hHHHHHHHhCCC----EEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10598 40 YIPHPKCRLFIT---HGGV-HSAFESIYHAVP----MVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVL 111 (119)
Q Consensus 40 ll~~~~~~~~I~---hgG~-~t~~eal~~g~P----~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l 111 (119)
++ ..+|+++. +-|. .++.||+++|+| +|+--..+-... ...|..+++. +.++++++|.+++
T Consensus 357 ~y--~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-------~~~g~lv~p~--d~~~la~ai~~~l 425 (460)
T cd03788 357 LY--RAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-------LSGALLVNPY--DIDEVADAIHRAL 425 (460)
T ss_pred HH--HhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-------cCCCEEECCC--CHHHHHHHHHHHH
Confidence 45 78899884 3453 678999999999 444322221111 2346777654 6889999999999
Q ss_pred cCc
Q psy10598 112 YEP 114 (119)
Q Consensus 112 ~~~ 114 (119)
+++
T Consensus 426 ~~~ 428 (460)
T cd03788 426 TMP 428 (460)
T ss_pred cCC
Confidence 765
No 154
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=79.39 E-value=6.1 Score=32.46 Aligned_cols=53 Identities=15% Similarity=0.353 Sum_probs=37.5
Q ss_pred CeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 45 KCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
.+|++|+-||=||++.+... ++|++.+-... +|.. .+.+++++.+++.++++.
T Consensus 348 ~~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G~-------------lGFL---~~~~~~~~~~~l~~~~~g 404 (569)
T PRK14076 348 EISHIISIGGDGTVLRASKLVNGEEIPIICINMGT-------------VGFL---TEFSKEEIFKAIDSIISG 404 (569)
T ss_pred CCCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCCC-------------CCcC---cccCHHHHHHHHHHHHcC
Confidence 57999999999999999764 77888874311 2322 234667777777777654
No 155
>KOG0853|consensus
Probab=79.32 E-value=0.34 Score=39.08 Aligned_cols=58 Identities=16% Similarity=0.133 Sum_probs=38.7
Q ss_pred hHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 56 HSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 56 ~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
-+..||+++|+|++..--. .-++-+...-.|..+++..-....+++++.++..|++++
T Consensus 380 iv~IEAMa~glPvvAt~~G----GP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~l~ 437 (495)
T KOG0853|consen 380 IVPIEAMACGLPVVATNNG----GPAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPELW 437 (495)
T ss_pred ceeHHHHhcCCCEEEecCC----CceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHHHH
Confidence 5778999999999997322 112223333467777763333446899999888888764
No 156
>KOG4626|consensus
Probab=77.84 E-value=1.8 Score=36.45 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=44.1
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHH-HHHHHHHcCceeEecC
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQ-NGQKAEEEGYGLMVDF 95 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~-na~~~~~~G~g~~l~~ 95 (119)
|+.|.+.+-.+..+.+++..+. .=..|-..+. |..|-++.++.|+|+|.+|...--.. -+..+...|+|-.+..
T Consensus 815 p~riifs~va~k~eHvrr~~La-Dv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak 889 (966)
T KOG4626|consen 815 PDRIIFSPVAAKEEHVRRGQLA-DVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK 889 (966)
T ss_pred ccceeeccccchHHHHHhhhhh-hhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh
Confidence 4566666655554433332222 1112334444 67888999999999999998543333 3344567888876543
No 157
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=77.73 E-value=7.8 Score=31.58 Aligned_cols=54 Identities=26% Similarity=0.332 Sum_probs=35.9
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
..+|++|+=||=||++.+... ++|++.+-.. .+|.. .+++++++.++|.+++..
T Consensus 261 ~~~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~G-------------~LGFL---t~i~~~e~~~~Le~il~G 318 (508)
T PLN02935 261 TKVDLVITLGGDGTVLWAASMFKGPVPPVVPFSMG-------------SLGFM---TPFHSEQYRDCLDAILKG 318 (508)
T ss_pred cCCCEEEEECCcHHHHHHHHHhccCCCcEEEEeCC-------------Cccee---cccCHHHHHHHHHHHHcC
Confidence 468999999999999999864 4677766210 13332 234566677777776643
No 158
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=76.26 E-value=1.6 Score=30.05 Aligned_cols=32 Identities=19% Similarity=0.451 Sum_probs=22.3
Q ss_pred CCCeeEEEEcCChhHHHHHHHhCCCEEEccCcc
Q psy10598 43 HPKCRLFITHGGVHSAFESIYHAVPMVIVPLFA 75 (119)
Q Consensus 43 ~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~ 75 (119)
...+|++|++||......... ++|++-+|..+
T Consensus 32 ~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 32 SEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred hcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 478999999999887777766 99999998864
No 159
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=75.78 E-value=3.7 Score=31.17 Aligned_cols=54 Identities=19% Similarity=0.190 Sum_probs=37.3
Q ss_pred cccCCCeeE-EEEcCChhHHHHHHHhCCCEEEccCcccHH---HHHHHHHHcCceeEecC
Q psy10598 40 YIPHPKCRL-FITHGGVHSAFESIYHAVPMVIVPLFADQK---QNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 40 ll~~~~~~~-~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~---~na~~~~~~G~g~~l~~ 95 (119)
+| ..+|. +||--..+.+.||+..|+|+.++|...-.. .-.+.+++.|+-..++.
T Consensus 225 ~L--a~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~~~ 282 (311)
T PF06258_consen 225 FL--AAADAIVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEERGAVRPFTG 282 (311)
T ss_pred HH--HhCCEEEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHCCCEEECCC
Confidence 56 55665 556666799999999999999998765211 13345667787766653
No 160
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=74.94 E-value=12 Score=29.07 Aligned_cols=83 Identities=17% Similarity=0.194 Sum_probs=60.0
Q ss_pred CCEEE-EeeccCCccccccccccCCCeeEEEE----cCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecC
Q psy10598 21 YNILV-FGVFPFTSHFRKCYYIPHPKCRLFIT----HGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDF 95 (119)
Q Consensus 21 ~nv~~-~~~~p~~~~~~~~~ll~~~~~~~~I~----hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~ 95 (119)
+|+.+ .+++|..+= -.+| .+||+.|- .=|.|+++-.+..|+|+++- .+..--+.+.+.|+-+....
T Consensus 245 ~~~~iL~e~mpf~eY---l~lL--~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~~ipVlf~~ 315 (360)
T PF07429_consen 245 ENFQILTEFMPFDEY---LALL--SRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQGIPVLFYG 315 (360)
T ss_pred cceeEhhhhCCHHHH---HHHH--HhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhCCCeEEecc
Confidence 46654 467775430 1156 78888763 45789999999999999984 33334466777888888887
Q ss_pred CCCCHHHHHHHHHHHhc
Q psy10598 96 DVFDYEELRRKVHQVLY 112 (119)
Q Consensus 96 ~~~~~~~l~~~i~~~l~ 112 (119)
++++...++++=+++..
T Consensus 316 d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 316 DELDEALVREAQRQLAN 332 (360)
T ss_pred ccCCHHHHHHHHHHHhh
Confidence 89999999988887753
No 161
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=74.90 E-value=4.8 Score=33.31 Aligned_cols=67 Identities=19% Similarity=0.266 Sum_probs=44.3
Q ss_pred CCEEEEeeccCCccccccccccCCCeeEEE---EcCChhHHHHHHHhCCCEEEccCcccHHH--HHHHH-HHcCceeEec
Q psy10598 21 YNILVFGVFPFTSHFRKCYYIPHPKCRLFI---THGGVHSAFESIYHAVPMVIVPLFADQKQ--NGQKA-EEEGYGLMVD 94 (119)
Q Consensus 21 ~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I---~hgG~~t~~eal~~g~P~i~~P~~~dQ~~--na~~~-~~~G~g~~l~ 94 (119)
+.+++.+=.|.... .-.+.-+|+|. -.||+.|..|++..|+|++..+ ++|+. |+..+ ...|+-..+-
T Consensus 489 eRL~f~p~~~~~~h-----~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA 561 (620)
T COG3914 489 ERLRFLPPAPNEDH-----RARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA 561 (620)
T ss_pred hheeecCCCCCHHH-----HHhhchhheeeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc
Confidence 45555554444332 44557799988 5799999999999999999975 66653 44333 4456554443
No 162
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=73.57 E-value=31 Score=27.95 Aligned_cols=74 Identities=22% Similarity=0.330 Sum_probs=56.7
Q ss_pred ccCCCeeEEEEcCCh--------------hHHHHHHHhCCCEEEc-----cCcccHHHHHHHHH-HcCceeE-ecCCCCC
Q psy10598 41 IPHPKCRLFITHGGV--------------HSAFESIYHAVPMVIV-----PLFADQKQNGQKAE-EEGYGLM-VDFDVFD 99 (119)
Q Consensus 41 l~~~~~~~~I~hgG~--------------~t~~eal~~g~P~i~~-----P~~~dQ~~na~~~~-~~G~g~~-l~~~~~~ 99 (119)
--|....++||--|. .++.|.-..|+|.+++ |...+-..-+..++ +.++-+. ++-.+++
T Consensus 142 ~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpvnc~~l~ 221 (492)
T PF09547_consen 142 TDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPVNCEQLR 221 (492)
T ss_pred ccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEeehHHcC
Confidence 367889999998884 4677778889999997 55556666666664 4687754 5557789
Q ss_pred HHHHHHHHHHHhcCc
Q psy10598 100 YEELRRKVHQVLYEP 114 (119)
Q Consensus 100 ~~~l~~~i~~~l~~~ 114 (119)
.+++...++++|..-
T Consensus 222 ~~DI~~Il~~vLyEF 236 (492)
T PF09547_consen 222 EEDITRILEEVLYEF 236 (492)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998764
No 163
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=70.48 E-value=1 Score=34.31 Aligned_cols=83 Identities=17% Similarity=0.267 Sum_probs=47.8
Q ss_pred CCCCEEEEeecc-CCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHH----HHHcCceeEe
Q psy10598 19 HGYNILVFGVFP-FTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQK----AEEEGYGLMV 93 (119)
Q Consensus 19 l~~nv~~~~~~p-~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~----~~~~G~g~~l 93 (119)
..+|+.....-+ -.+ +| ..+|++||--. +.+.|.+..++|+|......|+....+- .++...|..+
T Consensus 250 ~~~~i~~~~~~~~~~~------ll--~~aDiLITDyS-Si~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~ 320 (369)
T PF04464_consen 250 DNSNIIFVSDNEDIYD------LL--AAADILITDYS-SIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIV 320 (369)
T ss_dssp -TTTEEE-TT-S-HHH------HH--HT-SEEEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE
T ss_pred cCCcEEECCCCCCHHH------HH--HhcCEEEEech-hHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCcee
Confidence 456666654433 334 78 78999999875 5888999999999988655554422110 1122334333
Q ss_pred cCCCCCHHHHHHHHHHHhcCc
Q psy10598 94 DFDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 94 ~~~~~~~~~l~~~i~~~l~~~ 114 (119)
. +.++|.++|.+++.++
T Consensus 321 ~----~~~eL~~~i~~~~~~~ 337 (369)
T PF04464_consen 321 Y----NFEELIEAIENIIENP 337 (369)
T ss_dssp S----SHHHHHHHHTTHHHHH
T ss_pred C----CHHHHHHHHHhhhhCC
Confidence 3 6889999998876543
No 164
>PLN02727 NAD kinase
Probab=70.03 E-value=16 Score=32.12 Aligned_cols=53 Identities=19% Similarity=0.319 Sum_probs=35.9
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 112 (119)
..+|++|+=||=||++.+... ++|++.+-.. .+|... +.+++++.+.|.+++.
T Consensus 742 ~~~DLVIvLGGDGTlLrAar~~~~~~iPILGINlG-------------rLGFLT---di~~ee~~~~L~~Il~ 798 (986)
T PLN02727 742 ERVDFVACLGGDGVILHASNLFRGAVPPVVSFNLG-------------SLGFLT---SHYFEDFRQDLRQVIH 798 (986)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEeCC-------------Cccccc---cCCHHHHHHHHHHHHc
Confidence 468999999999999999764 6788777431 122222 2356666666666664
No 165
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=69.87 E-value=12 Score=25.15 Aligned_cols=63 Identities=14% Similarity=0.246 Sum_probs=38.1
Q ss_pred cccCCCeeEEEEcCC-----hhHHHHH---HHhCCCEEEccCcccHHHHH-HHHHHcCceeEecCCCCCHHHHHHHHHHH
Q psy10598 40 YIPHPKCRLFITHGG-----VHSAFES---IYHAVPMVIVPLFADQKQNG-QKAEEEGYGLMVDFDVFDYEELRRKVHQV 110 (119)
Q Consensus 40 ll~~~~~~~~I~hgG-----~~t~~ea---l~~g~P~i~~P~~~dQ~~na-~~~~~~G~g~~l~~~~~~~~~l~~~i~~~ 110 (119)
++ .+||++|-+=| ||+.+.| ++.|+|.|++-- +....+ +.+. ..+-.+.. +++++.+.++.+
T Consensus 69 li--~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~--~~~~HpLKEvd-a~A~a~~e----t~~Qvv~iL~Yv 139 (141)
T PF11071_consen 69 LI--EKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHP--EELHHPLKEVD-AAALAVAE----TPEQVVEILRYV 139 (141)
T ss_pred HH--hhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecc--hhccccHHHHh-HhhHhhhC----CHHHHHHHHHHH
Confidence 55 78999998888 6777765 577999999721 111111 1111 11112222 688888888766
Q ss_pred h
Q psy10598 111 L 111 (119)
Q Consensus 111 l 111 (119)
+
T Consensus 140 ~ 140 (141)
T PF11071_consen 140 L 140 (141)
T ss_pred h
Confidence 5
No 166
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=66.37 E-value=7.8 Score=33.22 Aligned_cols=63 Identities=17% Similarity=0.294 Sum_probs=43.8
Q ss_pred cccCCCeeEEEEc---CCh-hHHHHHHHhCCC---EEEccCcccHHHHHHHHHHcC-ceeEecCCCCCHHHHHHHHHHHh
Q psy10598 40 YIPHPKCRLFITH---GGV-HSAFESIYHAVP---MVIVPLFADQKQNGQKAEEEG-YGLMVDFDVFDYEELRRKVHQVL 111 (119)
Q Consensus 40 ll~~~~~~~~I~h---gG~-~t~~eal~~g~P---~i~~P~~~dQ~~na~~~~~~G-~g~~l~~~~~~~~~l~~~i~~~l 111 (119)
++ ..+|+++.- -|. .+++|++++|.| +++++-+.- .+.. .| .|+.+++. +.++++++|.++|
T Consensus 372 ly--~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G---~~~~---l~~~allVnP~--D~~~lA~AI~~aL 441 (797)
T PLN03063 372 LY--AITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG---AGQS---LGAGALLVNPW--NITEVSSAIKEAL 441 (797)
T ss_pred HH--HhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcC---chhh---hcCCeEEECCC--CHHHHHHHHHHHH
Confidence 56 789998844 465 677899999999 444443211 1111 23 57888765 7889999999999
Q ss_pred c
Q psy10598 112 Y 112 (119)
Q Consensus 112 ~ 112 (119)
+
T Consensus 442 ~ 442 (797)
T PLN03063 442 N 442 (797)
T ss_pred h
Confidence 7
No 167
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=65.63 E-value=9.2 Score=28.16 Aligned_cols=30 Identities=10% Similarity=0.204 Sum_probs=24.8
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~ 73 (119)
..+|++|+-||=||++.++.. ++|++.+-.
T Consensus 24 ~~~Dlvi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 24 EEADVIVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred ccCCEEEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 568999999999999988764 678887753
No 168
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=65.03 E-value=24 Score=27.17 Aligned_cols=66 Identities=20% Similarity=0.217 Sum_probs=46.5
Q ss_pred cccCCCeeEEEE----cCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10598 40 YIPHPKCRLFIT----HGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVL 111 (119)
Q Consensus 40 ll~~~~~~~~I~----hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l 111 (119)
+| ..||+.|- .=|.||++-.+..|+|+++-.- -+.+ +-+.+.|+-+..+.+.++...+.++=+++.
T Consensus 223 lL--~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~---n~fw-qdl~e~gv~Vlf~~d~L~~~~v~e~~rql~ 292 (322)
T PRK02797 223 LL--RQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRD---NPFW-QDLTEQGLPVLFTGDDLDEDIVREAQRQLA 292 (322)
T ss_pred HH--HhCCEEEEeechhhHHhHHHHHHHCCCcEEEecC---CchH-HHHHhCCCeEEecCCcccHHHHHHHHHHHH
Confidence 66 67888663 3478999999999999998521 1222 236677888777778888887777655543
No 169
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=64.02 E-value=27 Score=27.01 Aligned_cols=66 Identities=18% Similarity=0.111 Sum_probs=37.6
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEc-cCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCc
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIV-PLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~-P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 114 (119)
++ -.|+++|+-||. .--||+..|+|.|.+ |- .-..-.+.+.+.|. .... .++.+..+...+.+.++
T Consensus 249 Ll--yya~lvig~ggT-MarEaAlLGtpaIs~~pG--kll~vdk~lie~G~--~~~s--~~~~~~~~~a~~~l~~~ 315 (346)
T COG1817 249 LL--YYATLVIGAGGT-MAREAALLGTPAISCYPG--KLLAVDKYLIEKGL--LYHS--TDEIAIVEYAVRNLKYR 315 (346)
T ss_pred HH--hhhheeecCCch-HHHHHHHhCCceEEecCC--ccccccHHHHhcCc--eeec--CCHHHHHHHHHHHhhch
Confidence 55 468888887764 455999999999997 43 12222244455553 3321 13334444444555443
No 170
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=63.71 E-value=7.6 Score=30.48 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=46.7
Q ss_pred CCeeEEEEcCChhHHHHHHHhCCCEEEccCc-ccHHHHHHHHHHcCc--------eeEec----CCCCCHHHHHHHHHHH
Q psy10598 44 PKCRLFITHGGVHSAFESIYHAVPMVIVPLF-ADQKQNGQKAEEEGY--------GLMVD----FDVFDYEELRRKVHQV 110 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~-~dQ~~na~~~~~~G~--------g~~l~----~~~~~~~~l~~~i~~~ 110 (119)
..||+.+.-.|..| +|+.-+|+|||+.=-. .=-..-++++..... |..+- .++++++.|.+++..+
T Consensus 263 ~~aD~al~aSGT~t-LE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~l 341 (381)
T COG0763 263 AAADAALAASGTAT-LEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEEL 341 (381)
T ss_pred HHhhHHHHhccHHH-HHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHH
Confidence 68899888888655 5999999999997221 112334455544432 21111 1567899999999999
Q ss_pred hcCc
Q psy10598 111 LYEP 114 (119)
Q Consensus 111 l~~~ 114 (119)
+.|+
T Consensus 342 l~~~ 345 (381)
T COG0763 342 LLNG 345 (381)
T ss_pred hcCh
Confidence 9876
No 171
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=60.42 E-value=13 Score=28.04 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=25.4
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~ 73 (119)
..+|++|+-||=||+++++.. ++|++.+..
T Consensus 56 ~~~d~vi~~GGDGT~l~~~~~~~~~~~pv~gin~ 89 (305)
T PRK02645 56 ELIDLAIVLGGDGTVLAAARHLAPHDIPILSVNV 89 (305)
T ss_pred cCcCEEEEECCcHHHHHHHHHhccCCCCEEEEec
Confidence 458999999999999999854 789888864
No 172
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=60.25 E-value=55 Score=22.77 Aligned_cols=33 Identities=15% Similarity=0.128 Sum_probs=25.7
Q ss_pred HHHhCCCEEEccCc----ccHHHHHHHHHHcCceeEe
Q psy10598 61 SIYHAVPMVIVPLF----ADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 61 al~~g~P~i~~P~~----~dQ~~na~~~~~~G~g~~l 93 (119)
++..++|.+++|.. .-+..|...+.+.|+-+.-
T Consensus 108 ~L~~~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~ 144 (181)
T TIGR00421 108 CLKERRKLVLVPRETPLNSIHLENMLRLSRMGAIILP 144 (181)
T ss_pred HHhcCCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEEC
Confidence 57789999999963 3457788899999877653
No 173
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=59.96 E-value=53 Score=22.78 Aligned_cols=45 Identities=16% Similarity=0.353 Sum_probs=28.5
Q ss_pred CCCEEEccCccc-------HHHHHHHHHHcCceeEecCC------------CCCHHHHHHHHHH
Q psy10598 65 AVPMVIVPLFAD-------QKQNGQKAEEEGYGLMVDFD------------VFDYEELRRKVHQ 109 (119)
Q Consensus 65 g~P~i~~P~~~d-------Q~~na~~~~~~G~g~~l~~~------------~~~~~~l~~~i~~ 109 (119)
++|.+++|-... -..|-+.+.+.|+-++-... -.+++++.+.+.+
T Consensus 112 ~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~g~la~g~~g~g~~~~~~~i~~~~~~ 175 (177)
T TIGR02113 112 ETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKESLLACGDYGRGALADLDDILQTIKE 175 (177)
T ss_pred CCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCcCcccCCCccccCCCCHHHHHHHHHH
Confidence 799999995422 24677888888875542211 1346677766654
No 174
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=57.10 E-value=15 Score=24.09 Aligned_cols=45 Identities=24% Similarity=0.358 Sum_probs=25.8
Q ss_pred CCeeEEE-EcCChhHHHHHHHh---------CC-CEEEccC--cccH-HHHHHHHHHcC
Q psy10598 44 PKCRLFI-THGGVHSAFESIYH---------AV-PMVIVPL--FADQ-KQNGQKAEEEG 88 (119)
Q Consensus 44 ~~~~~~I-~hgG~~t~~eal~~---------g~-P~i~~P~--~~dQ-~~na~~~~~~G 88 (119)
..+|+|| .-||.||+-|.... .+ |++++=. +.|. ...-+++.+.|
T Consensus 52 ~~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~~~g~w~~l~~~l~~~~~~g 110 (133)
T PF03641_consen 52 ESSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLNIDGFWDPLLEFLDRMIEEG 110 (133)
T ss_dssp HHESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEECGGCCHHHHHHHHHHHHTT
T ss_pred HhCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeCCcchHHHHHHHHHHHHHCC
Confidence 4666655 66778999887532 34 9888732 2232 23334555555
No 175
>KOG4180|consensus
Probab=56.37 E-value=6 Score=30.64 Aligned_cols=28 Identities=18% Similarity=0.227 Sum_probs=24.6
Q ss_pred CCeeEEEEcCChhHHHHHHH----hCCCEEEc
Q psy10598 44 PKCRLFITHGGVHSAFESIY----HAVPMVIV 71 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~----~g~P~i~~ 71 (119)
+.+|++|+-||-||++-|.. -.+|+|.+
T Consensus 104 ~waD~VisvGGDGTfL~Aasrv~~~~~PViGv 135 (395)
T KOG4180|consen 104 RWADMVISVGGDGTFLLAASRVIDDSKPVIGV 135 (395)
T ss_pred chhhEEEEecCccceeehhhhhhccCCceeee
Confidence 89999999999999987765 46899888
No 176
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=55.79 E-value=22 Score=26.33 Aligned_cols=65 Identities=8% Similarity=-0.010 Sum_probs=41.0
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEc--cCcccHHHHHHHHHHcCceeEe--cCCCCCHHHHHHHHHHHh
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIV--PLFADQKQNGQKAEEEGYGLMV--DFDVFDYEELRRKVHQVL 111 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~--P~~~dQ~~na~~~~~~G~g~~l--~~~~~~~~~l~~~i~~~l 111 (119)
++ ..|+++|+.-. |..+=|.+.|+|.|.+ |....+. +- -..+..++. ..+.++++++.+++.++|
T Consensus 251 li--~~a~l~I~~DS-gp~HlAaa~g~P~i~lfg~t~p~~~--~P--~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 251 LL--AGADAVVGVDT-GLTHLAAALDKPTVTLYGATDPGRT--GG--YGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HH--HcCCEEEeCCC-hHHHHHHHcCCCEEEEECCCCHhhc--cc--CCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 67 78999999765 6777788899999987 3321111 00 000111111 135789999999998764
No 177
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=53.12 E-value=20 Score=25.00 Aligned_cols=45 Identities=22% Similarity=0.293 Sum_probs=27.6
Q ss_pred CCeeEEEE-cCChhHHHHHHH---------hCCCEEEcc---CcccHHHHHHHHHHcC
Q psy10598 44 PKCRLFIT-HGGVHSAFESIY---------HAVPMVIVP---LFADQKQNGQKAEEEG 88 (119)
Q Consensus 44 ~~~~~~I~-hgG~~t~~eal~---------~g~P~i~~P---~~~dQ~~na~~~~~~G 88 (119)
..+|+||. -||.||+-|.+. +.+|++++= ++.+-...-+.+.+.|
T Consensus 95 ~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~g 152 (178)
T TIGR00730 95 ELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQEG 152 (178)
T ss_pred HhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHCC
Confidence 56777665 466799988753 489998873 2222223334555555
No 178
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=53.05 E-value=80 Score=24.96 Aligned_cols=68 Identities=22% Similarity=0.360 Sum_probs=47.8
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCce-eEecCCCCCHHHHHHHHHHHhcC
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYG-LMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g-~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
++ .+++++|.- =..++.=|+..|+|.|.+-+ |......+++.|.- ..++...++.+.+.+.+.+.+.+
T Consensus 282 ~l--~~~dl~Vg~-R~HsaI~al~~g~p~i~i~Y---~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~ 350 (385)
T COG2327 282 IL--AACDLIVGM-RLHSAIMALAFGVPAIAIAY---DPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLTK 350 (385)
T ss_pred Hh--ccCceEEee-hhHHHHHHHhcCCCeEEEee---cHHHHHHHHHcCCCcccccCCCCchHHHHHHHHHHHhc
Confidence 56 778888853 34566778999999999854 34455667777764 44555677888888887776643
No 179
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=52.25 E-value=14 Score=25.18 Aligned_cols=31 Identities=19% Similarity=0.294 Sum_probs=21.6
Q ss_pred CCeeEEEE-cCChhHHHH---HHHhCCCEEEccCc
Q psy10598 44 PKCRLFIT-HGGVHSAFE---SIYHAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~-hgG~~t~~e---al~~g~P~i~~P~~ 74 (119)
..+|++|. -||.||+-| ++.+++|+++++..
T Consensus 90 ~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~~ 124 (159)
T TIGR00725 90 RSADVVVSVGGGYGTAIEILGAYALGGPVVVLRGT 124 (159)
T ss_pred HHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEECC
Confidence 55666554 466677655 57889999998753
No 180
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=52.13 E-value=11 Score=26.95 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=18.7
Q ss_pred CeeEEEEcCChhHHHHHHHhCCC
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVP 67 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P 67 (119)
..-++|+|||...++-+...|.|
T Consensus 175 ~~vlvVsHg~vir~ll~~~~~~~ 197 (228)
T PRK14116 175 KNVIIAAHGNSLRALTKYIENIS 197 (228)
T ss_pred CeEEEEcChHHHHHHHHHHhCCC
Confidence 44579999999888888888866
No 181
>TIGR03646 YtoQ_fam YtoQ family protein. Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=51.80 E-value=20 Score=24.15 Aligned_cols=30 Identities=27% Similarity=0.434 Sum_probs=23.7
Q ss_pred cccCCCeeEEEEcCC-----hhHHHHH---HHhCCCEEEc
Q psy10598 40 YIPHPKCRLFITHGG-----VHSAFES---IYHAVPMVIV 71 (119)
Q Consensus 40 ll~~~~~~~~I~hgG-----~~t~~ea---l~~g~P~i~~ 71 (119)
++ ..||++|-+=| +|+.+.| ++.|+|.|++
T Consensus 72 li--~~aDvvVvrFGekYKQWNaAfDAg~aaAlgKplI~l 109 (144)
T TIGR03646 72 LI--EKADVVIALFGEKYKQWNAAFDAGYAAALGKPLIIL 109 (144)
T ss_pred HH--hhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEe
Confidence 45 78899998877 6777765 5679999997
No 182
>PRK06270 homoserine dehydrogenase; Provisional
Probab=51.65 E-value=58 Score=24.87 Aligned_cols=74 Identities=14% Similarity=0.120 Sum_probs=42.2
Q ss_pred cccCCCeeEEEE------cCC---hhHHHHHHHhCCCEEEc---cCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHH
Q psy10598 40 YIPHPKCRLFIT------HGG---VHSAFESIYHAVPMVIV---PLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKV 107 (119)
Q Consensus 40 ll~~~~~~~~I~------hgG---~~t~~eal~~g~P~i~~---P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i 107 (119)
++..+..|++|- |++ ..-+.+++.+|+++++- |....-..-.+..++.|............--+.+.+
T Consensus 84 ll~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~~g~~~~~ea~v~~glPii~~l 163 (341)
T PRK06270 84 VIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKKNGVRFRYEATVGGAMPIINLA 163 (341)
T ss_pred HhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHHcCCEEEEeeeeeechhHHHHH
Confidence 555567888775 443 45567899999999994 765433334444555676655432111111245555
Q ss_pred HHHhcC
Q psy10598 108 HQVLYE 113 (119)
Q Consensus 108 ~~~l~~ 113 (119)
++.+..
T Consensus 164 ~~~l~g 169 (341)
T PRK06270 164 KETLAG 169 (341)
T ss_pred Hhhccc
Confidence 555543
No 183
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=51.15 E-value=47 Score=23.87 Aligned_cols=46 Identities=13% Similarity=0.140 Sum_probs=30.4
Q ss_pred hhHHHHHHHhCCCEEEccCccc--HHHHHHHHHHcCceeEecCCCCCHHHHHH
Q psy10598 55 VHSAFESIYHAVPMVIVPLFAD--QKQNGQKAEEEGYGLMVDFDVFDYEELRR 105 (119)
Q Consensus 55 ~~t~~eal~~g~P~i~~P~~~d--Q~~na~~~~~~G~g~~l~~~~~~~~~l~~ 105 (119)
..|...|+..|+|+.++|-..+ +..=...+-+.|+..+. +.+++.+
T Consensus 171 l~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~GA~~i~-----~~~d~~~ 218 (220)
T TIGR00732 171 LITARYALEQGREVFAYPGDLNSPESDGCHKLIEQGAALIT-----SAKDILE 218 (220)
T ss_pred HHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCCCEEEC-----CHHHHHH
Confidence 5788888999999999987533 33334455567865443 4555544
No 184
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=50.91 E-value=63 Score=26.60 Aligned_cols=43 Identities=21% Similarity=0.325 Sum_probs=31.1
Q ss_pred CCCeeEEEEcCChhHHHHHHHhCCCEEEccCc-ccHHHHHHHHHH
Q psy10598 43 HPKCRLFITHGGVHSAFESIYHAVPMVIVPLF-ADQKQNGQKAEE 86 (119)
Q Consensus 43 ~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~-~dQ~~na~~~~~ 86 (119)
+..+|++|+.||....... ...+|+|-++.. .|=...-..+..
T Consensus 62 ~~~~dviIsrG~ta~~i~~-~~~iPVv~i~~s~~Dil~al~~a~~ 105 (538)
T PRK15424 62 TERCDAIIAAGSNGAYLKS-RLSVPVILIKPSGFDVMQALARARK 105 (538)
T ss_pred hCCCcEEEECchHHHHHHh-hCCCCEEEecCCHhHHHHHHHHHHh
Confidence 3578999999998888877 468999999876 454433333333
No 185
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=50.41 E-value=17 Score=29.48 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=48.7
Q ss_pred EEEEeeccCCccccccccccCCCeeEEE---EcCChhHH-HHHHHhCC----CEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 23 ILVFGVFPFTSHFRKCYYIPHPKCRLFI---THGGVHSA-FESIYHAV----PMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 23 v~~~~~~p~~~~~~~~~ll~~~~~~~~I---~hgG~~t~-~eal~~g~----P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
+.+.+.+|..+. .+++ ..+|+++ .+.|+|.+ .|.++++. |.|+--+. -..+...-++.++
T Consensus 364 ~~~~~~v~~~el---~alY--r~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa-------Gaa~~l~~AllVN 431 (487)
T TIGR02398 364 QFFTRSLPYEEV---SAWF--AMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA-------GAAVELKGALLTN 431 (487)
T ss_pred EEEcCCCCHHHH---HHHH--HhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccc-------cchhhcCCCEEEC
Confidence 344455554430 2244 7788887 45688654 59988877 44442221 1124444578888
Q ss_pred CCCCCHHHHHHHHHHHhcCc
Q psy10598 95 FDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 95 ~~~~~~~~l~~~i~~~l~~~ 114 (119)
+. +.++++++|.+.|+.+
T Consensus 432 P~--d~~~~A~ai~~AL~m~ 449 (487)
T TIGR02398 432 PY--DPVRMDETIYVALAMP 449 (487)
T ss_pred CC--CHHHHHHHHHHHHcCC
Confidence 75 7889999999998765
No 186
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=49.68 E-value=15 Score=26.28 Aligned_cols=23 Identities=22% Similarity=0.241 Sum_probs=18.2
Q ss_pred CeeEEEEcCChhHHHHHHHhCCC
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVP 67 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P 67 (119)
..-++|+|||...++-+...|.|
T Consensus 175 ~~vlvVsHg~vir~l~~~~~~~~ 197 (228)
T PRK14119 175 QTVLVSAHGNSIRALIKYLEDVS 197 (228)
T ss_pred CeEEEEeChHHHHHHHHHHhCCC
Confidence 34579999999888877777776
No 187
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=49.40 E-value=68 Score=23.86 Aligned_cols=53 Identities=23% Similarity=0.422 Sum_probs=35.4
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 112 (119)
..+++++.=||-||++.+... ++|++.+=.. .+|...+ +..+++.+.+.++++
T Consensus 54 ~~~d~ivvlGGDGtlL~~~~~~~~~~~pilgin~G-------------~lGFLt~---~~~~~~~~~~~~~~~ 110 (281)
T COG0061 54 EKADLIVVLGGDGTLLRAARLLARLDIPVLGINLG-------------HLGFLTD---FEPDELEKALDALLE 110 (281)
T ss_pred cCceEEEEeCCcHHHHHHHHHhccCCCCEEEEeCC-------------Ccccccc---cCHHHHHHHHHHHhc
Confidence 578999999999999998755 4577776221 1343333 346667777776665
No 188
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=49.12 E-value=20 Score=24.94 Aligned_cols=23 Identities=13% Similarity=0.114 Sum_probs=17.7
Q ss_pred eeEEEEcCChhHHHHHHHhCCCE
Q psy10598 46 CRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 46 ~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
.-++|+|||....+=+...|.|.
T Consensus 146 ~vliVsHg~~ir~ll~~~lg~~~ 168 (204)
T TIGR03848 146 VWVACSHGDVIKSVLADALGMHL 168 (204)
T ss_pred EEEEEeCChHHHHHHHHHhCCCH
Confidence 34799999988777777777665
No 189
>PRK13463 phosphatase PhoE; Provisional
Probab=49.11 E-value=15 Score=25.62 Aligned_cols=24 Identities=8% Similarity=0.306 Sum_probs=18.9
Q ss_pred CeeEEEEcCChhHHHHHHHhCCCE
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
..-++|+|||...++-+...|.|.
T Consensus 144 ~~vlvVsHg~~ir~~~~~~~~~~~ 167 (203)
T PRK13463 144 ESILIVSHAAAAKLLVGHFAGIEI 167 (203)
T ss_pred CEEEEEeChHHHHHHHHHHhCCCH
Confidence 345889999998888777777664
No 190
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=48.81 E-value=26 Score=26.00 Aligned_cols=30 Identities=10% Similarity=0.031 Sum_probs=24.7
Q ss_pred CCeeEEEEcCChhHHHHHHH----hCCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESIY----HAVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~----~g~P~i~~P~ 73 (119)
..+|++|+=||=||++.++. .++|++.+-.
T Consensus 32 ~~~D~vi~iGGDGT~L~a~~~~~~~~iPilGIN~ 65 (259)
T PRK00561 32 DGADYLFVLGGDGFFVSTAANYNCAGCKVVGINT 65 (259)
T ss_pred CCCCEEEEECCcHHHHHHHHHhcCCCCcEEEEec
Confidence 46899999999999999875 4678888753
No 191
>PRK11475 DNA-binding transcriptional activator BglJ; Provisional
Probab=48.08 E-value=96 Score=21.88 Aligned_cols=52 Identities=6% Similarity=-0.054 Sum_probs=34.0
Q ss_pred hCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCccc
Q psy10598 64 HAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 64 ~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
.+.|+|++....+.......+.+.|+.-.+. +..+.++|.++|+.++....|
T Consensus 67 p~~~iIvlt~~~~~~~~~~~~~~~Ga~gyl~-K~~~~~eL~~aI~~v~~G~~~ 118 (207)
T PRK11475 67 PRMRRLVIADDDIEARLIGSLSPSPLDGVLS-KASTLEILQQELFLSLNGVRQ 118 (207)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHcCCeEEEe-cCCCHHHHHHHHHHHHCCCcc
Confidence 3678888865444444444454677644444 355889999999999876543
No 192
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=47.68 E-value=1.2e+02 Score=23.47 Aligned_cols=68 Identities=19% Similarity=0.241 Sum_probs=45.6
Q ss_pred CeeEEEEcCChhHHHHHHHh-----------------CCCEEEccCcccHHHHHHHHHHcCceeEe---cC-CCCCHHHH
Q psy10598 45 KCRLFITHGGVHSAFESIYH-----------------AVPMVIVPLFADQKQNGQKAEEEGYGLMV---DF-DVFDYEEL 103 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~-----------------g~P~i~~P~~~dQ~~na~~~~~~G~g~~l---~~-~~~~~~~l 103 (119)
.++.++|.||..+.+.++.. +.|.++++-..+ .-..+.+.-.|+|++. +. ...+.++|
T Consensus 103 ~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH-~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L 181 (373)
T PF00282_consen 103 DAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAH-YSIEKAARILGLGVRKIPTDEDGRMDIEAL 181 (373)
T ss_dssp TSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHHHHTTSEEEEE-BBTTSSB-HHHH
T ss_pred CCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccc-cHHHHhcceeeeEEEEecCCcchhhhHHHh
Confidence 47889999998777766522 356777765443 5556666778998653 22 34678899
Q ss_pred HHHHHHHhcC
Q psy10598 104 RRKVHQVLYE 113 (119)
Q Consensus 104 ~~~i~~~l~~ 113 (119)
.++|.+...+
T Consensus 182 ~~~l~~~~~~ 191 (373)
T PF00282_consen 182 EKALEKDIAN 191 (373)
T ss_dssp HHHHHHHHHT
T ss_pred hhhhcccccc
Confidence 9999887654
No 193
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=47.46 E-value=84 Score=25.74 Aligned_cols=43 Identities=16% Similarity=0.314 Sum_probs=30.8
Q ss_pred CCCeeEEEEcCChhHHHHHHHhCCCEEEccCc-ccHHHHHHHHHH
Q psy10598 43 HPKCRLFITHGGVHSAFESIYHAVPMVIVPLF-ADQKQNGQKAEE 86 (119)
Q Consensus 43 ~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~-~dQ~~na~~~~~ 86 (119)
+..+|++|+.||....... ...+|+|-++.. .|=...-..+..
T Consensus 52 ~~~~dviIsrG~ta~~i~~-~~~iPVv~i~~s~~Dil~al~~a~~ 95 (526)
T TIGR02329 52 AERCDVVVAGGSNGAYLKS-RLSLPVIVIKPTGFDVMQALARARR 95 (526)
T ss_pred hCCCcEEEECchHHHHHHH-hCCCCEEEecCChhhHHHHHHHHHh
Confidence 3578999999998887776 457999999876 454443334443
No 194
>PLN02496 probable phosphopantothenoylcysteine decarboxylase
Probab=47.35 E-value=1.1e+02 Score=22.13 Aligned_cols=50 Identities=14% Similarity=0.224 Sum_probs=32.3
Q ss_pred hCCCEEEccCcc----c---HHHHHHHHHHcCceeEecC------------CCCCHHHHHHHHHHHhcC
Q psy10598 64 HAVPMVIVPLFA----D---QKQNGQKAEEEGYGLMVDF------------DVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 64 ~g~P~i~~P~~~----d---Q~~na~~~~~~G~g~~l~~------------~~~~~~~l~~~i~~~l~~ 113 (119)
.++|.+++|... + -..|-+.+.+.|+-++-.. .-.+++++...+.+.+..
T Consensus 131 ~~~Pv~iaPaMN~~Mw~~Pat~~nl~~L~~~G~~vi~P~~g~lAcg~~G~Grm~ep~~I~~~i~~~l~~ 199 (209)
T PLN02496 131 YSKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVTKRLACGDYGNGAMAEPSLIYSTVRLFLES 199 (209)
T ss_pred CCCCEEEEeCCCHHHHhCHHHHHHHHHHHHCCCEEECCCcCcccCCCcCCCCCCCHHHHHHHHHHHHhh
Confidence 479999999742 2 1346677777776543211 113578888888887755
No 195
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=47.09 E-value=26 Score=26.13 Aligned_cols=28 Identities=11% Similarity=0.165 Sum_probs=25.4
Q ss_pred CCeeEEEEcCChhHHHHHHHhCCCEEEc
Q psy10598 44 PKCRLFITHGGVHSAFESIYHAVPMVIV 71 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~g~P~i~~ 71 (119)
-+-|++|+.++..+..-|-..|+|.+.+
T Consensus 92 ~~pDlVi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 92 YNPDLIISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred cCCCEEEECCchHHHHHHHhcCCCEEEE
Confidence 4679999999999999999999999976
No 196
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=47.08 E-value=38 Score=23.44 Aligned_cols=47 Identities=17% Similarity=0.309 Sum_probs=29.6
Q ss_pred hCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHH
Q psy10598 64 HAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQV 110 (119)
Q Consensus 64 ~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~ 110 (119)
.|+|.--+=++.|+..|-+.+.+.|+-.+.-+..++.+.+.+.+++.
T Consensus 120 tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~gL~~~ 166 (169)
T PF12689_consen 120 TGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFERGLEKF 166 (169)
T ss_dssp H---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHHHHHHH
T ss_pred cCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHHHHHHH
Confidence 45543333346899999999888998877777889999999888754
No 197
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=47.04 E-value=26 Score=25.97 Aligned_cols=30 Identities=17% Similarity=0.262 Sum_probs=25.3
Q ss_pred CCeeEEEEcCChhHHHHHHHh----CCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----AVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g~P~i~~P~ 73 (119)
..+|++|+-||=||++.+... ++|++.++.
T Consensus 75 ~~~D~ii~lGGDGT~L~~~~~~~~~~~Pilgin~ 108 (285)
T PF01513_consen 75 EGVDLIIVLGGDGTFLRAARLFGDYDIPILGINT 108 (285)
T ss_dssp CCSSEEEEEESHHHHHHHHHHCTTST-EEEEEES
T ss_pred cCCCEEEEECCCHHHHHHHHHhccCCCcEEeecC
Confidence 789999999999999999854 678888874
No 198
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=46.75 E-value=1.1e+02 Score=24.12 Aligned_cols=72 Identities=11% Similarity=0.171 Sum_probs=45.6
Q ss_pred CCeeEEE-EcCChhHHHH-------------HHHhCCCEEEccCcc-------cHHHHHHHHHHcCceeEecC-------
Q psy10598 44 PKCRLFI-THGGVHSAFE-------------SIYHAVPMVIVPLFA-------DQKQNGQKAEEEGYGLMVDF------- 95 (119)
Q Consensus 44 ~~~~~~I-~hgG~~t~~e-------------al~~g~P~i~~P~~~-------dQ~~na~~~~~~G~g~~l~~------- 95 (119)
..+|++| .-+-+||+.. ++..++|++++|-.. --..|...+.+.|+-++ .+
T Consensus 81 ~~aD~~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii-~P~~g~la~ 159 (399)
T PRK05579 81 KWADLVLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATLRSRGVEII-GPASGRLAC 159 (399)
T ss_pred cccCEEEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEE-CCCCccccC
Confidence 4567654 4455555433 245589999999542 23568888888886654 33
Q ss_pred ------CCCCHHHHHHHHHHHhcCccc
Q psy10598 96 ------DVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 96 ------~~~~~~~l~~~i~~~l~~~~~ 116 (119)
+-.+++++...+.+.+...++
T Consensus 160 ~~~g~gr~~~~~~I~~~~~~~~~~~~l 186 (399)
T PRK05579 160 GDVGPGRMAEPEEIVAAAERALSPKDL 186 (399)
T ss_pred CCcCCCCCCCHHHHHHHHHHHhhhccc
Confidence 224588898888887753333
No 199
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=46.69 E-value=17 Score=26.06 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=17.6
Q ss_pred eeEEEEcCChhHHHHHHHhCCCE
Q psy10598 46 CRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 46 ~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
.-++|+|||...++=+...|.|.
T Consensus 175 ~vlvVsHggvir~ll~~~l~~~~ 197 (227)
T PRK14118 175 RVLVAAHGNSLRALAKHIEGISD 197 (227)
T ss_pred eEEEEeCHHHHHHHHHHHhCCCH
Confidence 45799999987777777777663
No 200
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=46.29 E-value=27 Score=26.68 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=25.7
Q ss_pred ccCCCeeEEEEcCChhH---HHHHHHhCCCEEEc
Q psy10598 41 IPHPKCRLFITHGGVHS---AFESIYHAVPMVIV 71 (119)
Q Consensus 41 l~~~~~~~~I~hgG~~t---~~eal~~g~P~i~~ 71 (119)
+..-+-|++|++||+-+ ++.|...|+|.++.
T Consensus 87 ~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 87 IRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 44456789999999976 88899999999875
No 201
>PRK13057 putative lipid kinase; Reviewed
Probab=46.19 E-value=28 Score=25.68 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=24.9
Q ss_pred CCeeEEEEcCChhHHHHHH----HhCCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESI----YHAVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal----~~g~P~i~~P~ 73 (119)
+..|.+|.-||=||+.|++ ..+.|+-++|.
T Consensus 49 ~~~d~iiv~GGDGTv~~v~~~l~~~~~~lgiiP~ 82 (287)
T PRK13057 49 DGVDLVIVGGGDGTLNAAAPALVETGLPLGILPL 82 (287)
T ss_pred cCCCEEEEECchHHHHHHHHHHhcCCCcEEEECC
Confidence 4578999999999998886 34688888996
No 202
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=45.50 E-value=18 Score=24.30 Aligned_cols=23 Identities=35% Similarity=0.523 Sum_probs=17.6
Q ss_pred CeeEEEEcCChhHHHHHHHhCCC
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVP 67 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P 67 (119)
..-++|+|||...++-+...|.|
T Consensus 138 ~~vlvVsHg~~i~~l~~~~~~~~ 160 (177)
T TIGR03162 138 DNVLIVTHGGVIRALLAHLLGLP 160 (177)
T ss_pred CeEEEEECHHHHHHHHHHHhCCC
Confidence 34578999998888777777765
No 203
>TIGR02836 spore_IV_A stage IV sporulation protein A. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis.
Probab=44.57 E-value=1.7e+02 Score=23.84 Aligned_cols=72 Identities=21% Similarity=0.294 Sum_probs=48.2
Q ss_pred CCCeeEEEEcCC---------h-----hHHHHHHHhCCCEEEc-----cCcccHHHHHHHHH-HcCce-eEecCCCCCHH
Q psy10598 43 HPKCRLFITHGG---------V-----HSAFESIYHAVPMVIV-----PLFADQKQNGQKAE-EEGYG-LMVDFDVFDYE 101 (119)
Q Consensus 43 ~~~~~~~I~hgG---------~-----~t~~eal~~g~P~i~~-----P~~~dQ~~na~~~~-~~G~g-~~l~~~~~~~~ 101 (119)
|....++|+-.| + ..+.|.-..|+|.+++ |...+....+..++ +.++- +.++-.+++.+
T Consensus 144 hstIgivVtTDgsi~dI~Re~y~~aEe~~i~eLk~~~kPfiivlN~~dp~~~et~~l~~~l~eky~vpvl~v~c~~l~~~ 223 (492)
T TIGR02836 144 HSTIGVVVTTDGTITDIPREDYVEAEERVIEELKELNKPFIILLNSTHPYHPETEALRQELEEKYDVPVLAMDVESMRES 223 (492)
T ss_pred cCcEEEEEEcCCCccccccccchHHHHHHHHHHHhcCCCEEEEEECcCCCCchhHHHHHHHHHHhCCceEEEEHHHcCHH
Confidence 777888888444 2 4566667789999998 33333333344453 34654 44555678899
Q ss_pred HHHHHHHHHhcCc
Q psy10598 102 ELRRKVHQVLYEP 114 (119)
Q Consensus 102 ~l~~~i~~~l~~~ 114 (119)
++.+.++++|..-
T Consensus 224 DI~~il~~vL~EF 236 (492)
T TIGR02836 224 DILSVLEEVLYEF 236 (492)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998764
No 204
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=44.40 E-value=19 Score=25.84 Aligned_cols=23 Identities=17% Similarity=0.150 Sum_probs=17.8
Q ss_pred CeeEEEEcCChhHHHHHHHhCCC
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVP 67 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P 67 (119)
..-++|+|||...++=+...|.|
T Consensus 175 ~~vlvVsHg~~ir~ll~~~lg~~ 197 (230)
T PRK14117 175 KNVFVGAHGNSIRALVKHIKGLS 197 (230)
T ss_pred CEEEEEeChHHHHHHHHHHhCcC
Confidence 34589999998877777777766
No 205
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=43.14 E-value=31 Score=22.16 Aligned_cols=31 Identities=23% Similarity=0.308 Sum_probs=23.7
Q ss_pred CCeeEEEEcCChhHHHHHHHh----C-----CCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESIYH----A-----VPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~----g-----~P~i~~P~~ 74 (119)
...|.+|.-||=||+.|.+-. + .|+-++|..
T Consensus 48 ~~~d~vvv~GGDGTi~~vvn~l~~~~~~~~~~plgiiP~G 87 (124)
T smart00046 48 PKFDRVLVCGGDGTVGWVLNALDKRELPLPEPPVAVLPLG 87 (124)
T ss_pred CcCCEEEEEccccHHHHHHHHHHhcccccCCCcEEEeCCC
Confidence 345789999999999988632 3 678888985
No 206
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=42.29 E-value=27 Score=26.32 Aligned_cols=23 Identities=17% Similarity=0.278 Sum_probs=18.6
Q ss_pred eeEEEEcCChhHHHHHHHhCCCE
Q psy10598 46 CRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 46 ~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
..++|+|||...++-+...|.|.
T Consensus 234 ~vLVVsHGgvIR~ll~~lLglp~ 256 (299)
T PTZ00122 234 VEIIVCHGNVIRYLVCRALQLPP 256 (299)
T ss_pred eEEEEeCChHHHHHHHHHhCcCH
Confidence 45899999998888887788663
No 207
>PRK11914 diacylglycerol kinase; Reviewed
Probab=42.21 E-value=31 Score=25.67 Aligned_cols=30 Identities=17% Similarity=0.308 Sum_probs=25.0
Q ss_pred CCeeEEEEcCChhHHHHHH----HhCCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESI----YHAVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal----~~g~P~i~~P~ 73 (119)
...|++|.-||=||+.|++ ..++|+-++|.
T Consensus 63 ~~~d~vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 63 KGTDALVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred cCCCEEEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 4568999999999999987 34688888996
No 208
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=42.20 E-value=1.2e+02 Score=21.15 Aligned_cols=48 Identities=19% Similarity=0.339 Sum_probs=32.6
Q ss_pred CCCEEEccCcc----c---HHHHHHHHHHcCceeEecCC------------CCCHHHHHHHHHHHhc
Q psy10598 65 AVPMVIVPLFA----D---QKQNGQKAEEEGYGLMVDFD------------VFDYEELRRKVHQVLY 112 (119)
Q Consensus 65 g~P~i~~P~~~----d---Q~~na~~~~~~G~g~~l~~~------------~~~~~~l~~~i~~~l~ 112 (119)
++|.+++|... . ..+|..++.+.|+-++-... -.+.+++.+.+.+.+.
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~~g~la~~~~g~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPKEGLLACGDEGYGALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCCCCccccCCccCCCCCCHHHHHHHHHHHhc
Confidence 89999999632 2 25678888888866543221 2357888888877664
No 209
>PRK13059 putative lipid kinase; Reviewed
Probab=41.87 E-value=29 Score=25.76 Aligned_cols=30 Identities=17% Similarity=0.361 Sum_probs=24.2
Q ss_pred CCeeEEEEcCChhHHHHHH---H---hCCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESI---Y---HAVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal---~---~g~P~i~~P~ 73 (119)
...|.+|.-||=||+.|.+ . .++|+-++|.
T Consensus 55 ~~~d~vi~~GGDGTv~evv~gl~~~~~~~~lgviP~ 90 (295)
T PRK13059 55 ESYKYILIAGGDGTVDNVVNAMKKLNIDLPIGILPV 90 (295)
T ss_pred cCCCEEEEECCccHHHHHHHHHHhcCCCCcEEEECC
Confidence 4678999999999988875 2 2478888997
No 210
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=41.61 E-value=1.1e+02 Score=20.67 Aligned_cols=29 Identities=10% Similarity=0.297 Sum_probs=22.4
Q ss_pred CCeeEEEEcCCh------hHHHHHHHhCCCEEEcc
Q psy10598 44 PKCRLFITHGGV------HSAFESIYHAVPMVIVP 72 (119)
Q Consensus 44 ~~~~~~I~hgG~------~t~~eal~~g~P~i~~P 72 (119)
.+..++++|.|. +.+.+|...++|+|++.
T Consensus 62 g~~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 62 GKLGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 345667777663 67889999999999995
No 211
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=40.93 E-value=22 Score=24.63 Aligned_cols=24 Identities=25% Similarity=0.367 Sum_probs=18.5
Q ss_pred CeeEEEEcCChhHHHHHHHhCCCE
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
..-++|+|||...++-+...|.|.
T Consensus 142 ~~iliVsHg~~i~~l~~~~~~~~~ 165 (199)
T PRK15004 142 QNLLIVSHQGVLSLLIARLLGMPA 165 (199)
T ss_pred CeEEEEcChHHHHHHHHHHhCCCH
Confidence 346799999988877777777664
No 212
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=40.58 E-value=45 Score=25.26 Aligned_cols=31 Identities=16% Similarity=0.112 Sum_probs=25.5
Q ss_pred CCeeEEEEcCChhHHHHHHH----hCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESIY----HAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~----~g~P~i~~P~~ 74 (119)
-..|.+|.=||-+|...+.. +++|++.+|-.
T Consensus 90 ~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkT 124 (301)
T TIGR02482 90 LGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGT 124 (301)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccc
Confidence 47899999999988866642 68999999974
No 213
>PRK03482 phosphoglycerate mutase; Provisional
Probab=40.45 E-value=26 Score=24.53 Aligned_cols=23 Identities=22% Similarity=0.335 Sum_probs=18.3
Q ss_pred eeEEEEcCChhHHHHHHHhCCCE
Q psy10598 46 CRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 46 ~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
.-++|+|||...++-+...|.|.
T Consensus 144 ~vliVsHg~~i~~l~~~l~~~~~ 166 (215)
T PRK03482 144 RPLLVSHGIALGCLVSTILGLPA 166 (215)
T ss_pred eEEEEeCcHHHHHHHHHHhCCCh
Confidence 45799999988887777788764
No 214
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=40.17 E-value=54 Score=22.35 Aligned_cols=30 Identities=17% Similarity=0.400 Sum_probs=23.1
Q ss_pred CCeeEEEEcCCh------hHHHHHHHhCCCEEEccC
Q psy10598 44 PKCRLFITHGGV------HSAFESIYHAVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~------~t~~eal~~g~P~i~~P~ 73 (119)
.+..++++|+|. +.+.||...+.|+|++.-
T Consensus 59 g~~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 59 GRPVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred CCCEEEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 355677788774 567799999999999943
No 215
>PRK01112 phosphoglyceromutase; Provisional
Probab=40.05 E-value=24 Score=25.36 Aligned_cols=24 Identities=13% Similarity=0.080 Sum_probs=18.8
Q ss_pred CeeEEEEcCChhHHHHHHHhCCCE
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
..-++|+|||...++-+...|.|.
T Consensus 174 ~~ilVVsHg~vir~l~~~ll~~~~ 197 (228)
T PRK01112 174 KNVFVSAHGNSLRSLIMDLEKLSE 197 (228)
T ss_pred CeEEEEeCHHHHHHHHHHHhCCCH
Confidence 457788999988887787777664
No 216
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]
Probab=39.45 E-value=1.3e+02 Score=23.52 Aligned_cols=30 Identities=23% Similarity=0.323 Sum_probs=25.1
Q ss_pred CCeeEEEEcCChhHHHHHHHh---CCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH---AVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~---g~P~i~~P~ 73 (119)
..+|+++.-||-||.-..+.. .+|++.+|.
T Consensus 99 ~gVdlIvfaGGDGTarDVa~av~~~vPvLGipa 131 (355)
T COG3199 99 RGVDLIVFAGGDGTARDVAEAVGADVPVLGIPA 131 (355)
T ss_pred cCceEEEEeCCCccHHHHHhhccCCCceEeecc
Confidence 469999999998887666555 899999996
No 217
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=39.39 E-value=1.2e+02 Score=20.43 Aligned_cols=27 Identities=19% Similarity=0.231 Sum_probs=19.8
Q ss_pred eeEEEEcCC------hhHHHHHHHhCCCEEEcc
Q psy10598 46 CRLFITHGG------VHSAFESIYHAVPMVIVP 72 (119)
Q Consensus 46 ~~~~I~hgG------~~t~~eal~~g~P~i~~P 72 (119)
..+++++.| .+.+.+|...++|+|++.
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 445555555 366788899999999995
No 218
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=38.79 E-value=26 Score=25.25 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=17.5
Q ss_pred eeEEEEcCChhHHHHHHHhCCC
Q psy10598 46 CRLFITHGGVHSAFESIYHAVP 67 (119)
Q Consensus 46 ~~~~I~hgG~~t~~eal~~g~P 67 (119)
.-++|+|||...++=+...|.|
T Consensus 163 ~vliVsHG~vir~ll~~l~~~~ 184 (236)
T PTZ00123 163 KVLVAAHGNSLRALVKYLDKMS 184 (236)
T ss_pred eEEEEeCHHHHHHHHHHHhCCC
Confidence 4579999998887777777766
No 219
>PRK05920 aromatic acid decarboxylase; Validated
Probab=38.74 E-value=58 Score=23.29 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=24.8
Q ss_pred HHHHhCCCEEEccCc-cc---HHHHHHHHHHcCceeE
Q psy10598 60 ESIYHAVPMVIVPLF-AD---QKQNGQKAEEEGYGLM 92 (119)
Q Consensus 60 eal~~g~P~i~~P~~-~d---Q~~na~~~~~~G~g~~ 92 (119)
+++..+.|++++|.. .. ...|...+.+.|+-++
T Consensus 125 ~~L~~~~pvvi~P~~m~~~~~~~~nl~~L~~~G~~ii 161 (204)
T PRK05920 125 VVLKERRKLILVPRETPLSLIHLENMLKLAEAGAIIL 161 (204)
T ss_pred HHHhcCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEe
Confidence 457789999999973 22 3578888888887754
No 220
>PRK01295 phosphoglyceromutase; Provisional
Probab=38.68 E-value=25 Score=24.75 Aligned_cols=24 Identities=17% Similarity=0.216 Sum_probs=19.0
Q ss_pred CeeEEEEcCChhHHHHHHHhCCCE
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
..-++|+|||...++-+...|.|.
T Consensus 151 ~~vliVtHg~~ir~l~~~~l~~~~ 174 (206)
T PRK01295 151 ERVLVAAHGNSLRALVMVLDGLTP 174 (206)
T ss_pred CeEEEEcChHHHHHHHHHHhCCCH
Confidence 456899999988887777777774
No 221
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=38.54 E-value=1.1e+02 Score=19.93 Aligned_cols=29 Identities=14% Similarity=0.352 Sum_probs=21.5
Q ss_pred CeeEEEEcCC------hhHHHHHHHhCCCEEEccC
Q psy10598 45 KCRLFITHGG------VHSAFESIYHAVPMVIVPL 73 (119)
Q Consensus 45 ~~~~~I~hgG------~~t~~eal~~g~P~i~~P~ 73 (119)
+..++++|.| .+.+.++...++|+|++.-
T Consensus 59 ~~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 59 KPGVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CCEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 4556777755 3677888889999999953
No 222
>PRK13054 lipid kinase; Reviewed
Probab=37.78 E-value=49 Score=24.57 Aligned_cols=30 Identities=23% Similarity=0.210 Sum_probs=24.2
Q ss_pred CCeeEEEEcCChhHHHHHHHh------C--CCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH------A--VPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~------g--~P~i~~P~ 73 (119)
...|.+|.-||=||+.|.+.. + .|+-++|.
T Consensus 55 ~~~d~vvv~GGDGTl~evv~~l~~~~~~~~~~lgiiP~ 92 (300)
T PRK13054 55 LGVATVIAGGGDGTINEVATALAQLEGDARPALGILPL 92 (300)
T ss_pred cCCCEEEEECCccHHHHHHHHHHhhccCCCCcEEEEeC
Confidence 567899999999999998743 2 47888896
No 223
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=37.42 E-value=45 Score=24.50 Aligned_cols=30 Identities=23% Similarity=0.304 Sum_probs=22.3
Q ss_pred CCeeEEEEcCChhHHHHHHHh-----CCCEEE-ccC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH-----AVPMVI-VPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~-----g~P~i~-~P~ 73 (119)
...|++|.-||=||+.|++.. ..|.+. +|.
T Consensus 56 ~~~d~ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 56 FGVDTVIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred cCCCEEEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 357899999999999996632 345554 786
No 224
>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins. Bacterial and archeal glycerol-1-phosphate dehydrogenase-like oxidoreductases. The proteins have similarity with glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. It also contains archaeal Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) that plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids.
Probab=36.57 E-value=50 Score=25.09 Aligned_cols=30 Identities=13% Similarity=0.266 Sum_probs=22.5
Q ss_pred CeeEEEEcCChhHHHHH-----HHhCCCEEEccCcc
Q psy10598 45 KCRLFITHGGVHSAFES-----IYHAVPMVIVPLFA 75 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~ea-----l~~g~P~i~~P~~~ 75 (119)
.+|++|.=||. ++..+ ...|+|.|.+|...
T Consensus 80 ~~d~IIaiGGG-sv~D~aK~iA~~~gip~I~VPTT~ 114 (332)
T cd08549 80 DTEFLLGIGSG-TIIDLVKFVSFKVGKPFISVPTAP 114 (332)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCCEEEeCCCc
Confidence 78999999983 44343 34599999999863
No 225
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=35.55 E-value=56 Score=19.36 Aligned_cols=46 Identities=20% Similarity=0.272 Sum_probs=31.3
Q ss_pred CEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEe
Q psy10598 22 NILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 22 nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l 93 (119)
++....|.|... +++-++|.||-.-.. .--..-|+.+.+.|+.+..
T Consensus 3 ~L~~~~w~p~~~----------~k~~v~i~HG~~eh~----------------~ry~~~a~~L~~~G~~V~~ 48 (79)
T PF12146_consen 3 KLFYRRWKPENP----------PKAVVVIVHGFGEHS----------------GRYAHLAEFLAEQGYAVFA 48 (79)
T ss_pred EEEEEEecCCCC----------CCEEEEEeCCcHHHH----------------HHHHHHHHHHHhCCCEEEE
Confidence 456778888775 688999999863221 1124467888888888764
No 226
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=35.46 E-value=53 Score=25.03 Aligned_cols=30 Identities=17% Similarity=0.348 Sum_probs=22.5
Q ss_pred CCeeEEEEcCChhHHHHH-----HHhCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFES-----IYHAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~ea-----l~~g~P~i~~P~~ 74 (119)
.++|++|.=|| ||++.+ ...|+|.|.+|..
T Consensus 77 ~~~d~iiavGG-Gs~~D~aK~ia~~~~~p~i~VPTt 111 (345)
T cd08171 77 QEADMIFAVGG-GKAIDTVKVLADKLGKPVFTFPTI 111 (345)
T ss_pred cCCCEEEEeCC-cHHHHHHHHHHHHcCCCEEEecCc
Confidence 57899999988 455444 2348999999974
No 227
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH). Dehydroquinate synthase-like. This superfamily divides into two subgroups: the dehydroquinate synthase-like, and a large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. Dehydroquinate synthase-like group includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. The alcohol dehydrogenases in this superfamily contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alc
Probab=35.43 E-value=52 Score=24.71 Aligned_cols=30 Identities=27% Similarity=0.511 Sum_probs=21.8
Q ss_pred CCeeEEEEcCChhHHHHHH-----Hh--CCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESI-----YH--AVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal-----~~--g~P~i~~P~~ 74 (119)
.++|++|.=||. |++.+. .+ |+|.+.+|..
T Consensus 77 ~~~d~IIaiGGG-s~~D~aK~ia~~~~~~~p~i~iPTt 113 (332)
T cd07766 77 AEVDAVIAVGGG-STLDTAKAVAALLNRGLPIIIVPTT 113 (332)
T ss_pred cCcCEEEEeCCc-hHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 578999999884 443432 23 9999999975
No 228
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=35.06 E-value=11 Score=31.75 Aligned_cols=63 Identities=17% Similarity=0.223 Sum_probs=40.0
Q ss_pred CCeeEEEEc---CC-hhHHHHHHHhCCC---EEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCc
Q psy10598 44 PKCRLFITH---GG-VHSAFESIYHAVP---MVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 44 ~~~~~~I~h---gG-~~t~~eal~~g~P---~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 114 (119)
..+|+++.- -| ..++.|++++|+| .+++..+. .-+..+ .-|+.+++. +.++++++|.++++.+
T Consensus 360 ~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~---G~~~~l---~~~llv~P~--d~~~la~ai~~~l~~~ 429 (726)
T PRK14501 360 RAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMA---GAAAEL---AEALLVNPN--DIEGIAAAIKRALEMP 429 (726)
T ss_pred HhccEEEecccccccCcccceEEEEcCCCCceEEEeccc---chhHHh---CcCeEECCC--CHHHHHHHHHHHHcCC
Confidence 789998854 34 3678899999775 23332211 111111 237777765 6888999999998754
No 229
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=34.86 E-value=31 Score=25.07 Aligned_cols=23 Identities=22% Similarity=0.326 Sum_probs=18.1
Q ss_pred CeeEEEEcCChhHHHHHHHhCCC
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVP 67 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P 67 (119)
..-++|||||...++-+...|.|
T Consensus 174 ~~vlvVsHg~vir~l~~~l~~l~ 196 (245)
T TIGR01258 174 KRVLIVAHGNSLRALVKHLEGIS 196 (245)
T ss_pred CEEEEEcChHHHHHHHHHHHCcC
Confidence 35689999998888777777765
No 230
>PRK03202 6-phosphofructokinase; Provisional
Probab=34.67 E-value=66 Score=24.58 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=25.8
Q ss_pred CCeeEEEEcCChhHHHHHHH---hCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESIY---HAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~---~g~P~i~~P~~ 74 (119)
-..|.+|.=||-+|..-+.. +++|+|.+|-.
T Consensus 92 ~~Id~Li~IGGd~s~~~a~~L~e~~i~vigiPkT 125 (320)
T PRK03202 92 LGIDALVVIGGDGSYMGAKRLTEHGIPVIGLPGT 125 (320)
T ss_pred cCCCEEEEeCChHHHHHHHHHHhcCCcEEEeccc
Confidence 47899999999988876654 59999999974
No 231
>PRK10100 DNA-binding transcriptional regulator CsgD; Provisional
Probab=34.62 E-value=1.7e+02 Score=20.77 Aligned_cols=51 Identities=12% Similarity=0.062 Sum_probs=31.4
Q ss_pred hCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCccc
Q psy10598 64 HAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEPKY 116 (119)
Q Consensus 64 ~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~ 116 (119)
.+.|+|++-...+... .......|+.-.+. ++.+.++|.++|+.++....|
T Consensus 80 p~~~vvvlt~~~~~~~-~~~~~~~Ga~G~l~-K~~~~~~L~~aI~~v~~G~~~ 130 (216)
T PRK10100 80 NNIKILLLNTPEDYPY-REIENWPHINGVFY-AMEDQERVVNGLQGVLRGECY 130 (216)
T ss_pred CCCcEEEEECCchhHH-HHHHHhcCCeEEEE-CCCCHHHHHHHHHHHHcCCcc
Confidence 4677888766555332 21222247643443 355899999999999876544
No 232
>PF01372 Melittin: Melittin; InterPro: IPR002116 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an Arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 3. Melittin is the principal protein component of the venom of the honeybee, Apis mellifera. It inhibits protein kinase C, Ca2+/calmodulin-dependent protein kinase II, myosin light chain kinase and Na+/K+-ATPase (synaptosomal membrane) and is a cell membrane lytic factor. Melittin is a small peptide with no disulphide bridge; the N-terminal part of the molecule is predominantly hydrophobic and the C-terminal part is hydrophilic and strongly basic. The molecular mechanisms underlying the various effects of melittin on membranes have not been completely defined and much of the evidence indicates that different molecular mechanisms may underlie different actions of the peptide []. Extensive work with melittin has shown that the venom has multiple effects, probably, as a result of its interaction with negatively changed phospholipids. It inhibits well known transport pumps such as the Na+-K+-ATPase and the H+-K+-ATPase. Melittin increases the permeability of cell membranes to ions, particularly Na+ and indirectly Ca2+, because of the Na+-Ca2+-exchange. This effect results in marked morphological and functional changes, particularly in excitable tissues such as cardiac myocytes. In some other tissues, e.g., cornea, not only Na+ but Cl- permeability is also increased by melittin. Similar effects to melittin on H+-K+-ATPase have been found with the synthetic amphipathic polypeptide Trp-3 []. The study of melittin in model membranes has been useful for the development of methodology for determination of membrane protein structures. A molecular dynamics simulation of melittin in a hydrated dipalmitoylphosphatidylcholine (DPPC) bilayer was carried out. The effect of melittin on the surrounding membrane was localised to its immediate vicinity, and its asymmetry with respect to the two layers may be a result of the fact that it is not fully transmembranal. Melittin's hydrophilic C terminus anchors it at the extracellular interface, leaving the N terminus "loose" in the lower layer of the membrane [].; GO: 0004860 protein kinase inhibitor activity, 0005576 extracellular region; PDB: 3QRX_B 2MLT_A 1BH1_A.
Probab=33.93 E-value=4 Score=19.24 Aligned_cols=17 Identities=18% Similarity=0.514 Sum_probs=12.4
Q ss_pred ChhHHHHHHHhCCCEEE
Q psy10598 54 GVHSAFESIYHAVPMVI 70 (119)
Q Consensus 54 G~~t~~eal~~g~P~i~ 70 (119)
|.|+++..++.|.|.++
T Consensus 1 gIGa~Lkvla~~LP~lI 17 (26)
T PF01372_consen 1 GIGAILKVLATGLPTLI 17 (26)
T ss_dssp -HHHHHHHHHTHHHHHH
T ss_pred ChhHHHHHHHhcChHHH
Confidence 56788888888887654
No 233
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=33.90 E-value=1.6e+02 Score=20.29 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=23.5
Q ss_pred CeeEEEEcCC----------------hhHHHHHHHhCCCEEEccCcc
Q psy10598 45 KCRLFITHGG----------------VHSAFESIYHAVPMVIVPLFA 75 (119)
Q Consensus 45 ~~~~~I~hgG----------------~~t~~eal~~g~P~i~~P~~~ 75 (119)
.++.+|-.|| ......+...++|+++++...
T Consensus 63 ~~~~vii~GGg~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~g~g~ 109 (286)
T PF04230_consen 63 NADDVIIGGGGGSDNNFIDLWSLPIFLRWLFLAKKLGKPVIILGQGI 109 (286)
T ss_pred cCCeEEEECCcccccCCCcchhhHHHHHHHHHHHhcCCCeEEECceE
Confidence 4566777777 556677788999999987653
No 234
>PF12496 BNIP2: Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2; InterPro: IPR022181 This domain family is found in eukaryotes, and is typically between 119 and 133 amino acids in length. There is a conserved HGGY sequence motif. This family is Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2. It interacts with pro- and anti- apoptotic molecules in the cell.
Probab=33.62 E-value=19 Score=23.96 Aligned_cols=8 Identities=50% Similarity=0.895 Sum_probs=6.6
Q ss_pred EEEEcCCh
Q psy10598 48 LFITHGGV 55 (119)
Q Consensus 48 ~~I~hgG~ 55 (119)
=||+|||+
T Consensus 116 rViSHGGY 123 (127)
T PF12496_consen 116 RVISHGGY 123 (127)
T ss_pred eeeccCCc
Confidence 37999996
No 235
>PRK13840 sucrose phosphorylase; Provisional
Probab=33.32 E-value=52 Score=26.85 Aligned_cols=44 Identities=9% Similarity=0.117 Sum_probs=30.9
Q ss_pred hCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHH
Q psy10598 64 HAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKV 107 (119)
Q Consensus 64 ~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i 107 (119)
-|+|+|.+.-..-....-..+++.|-++.++...++.+++.+.+
T Consensus 371 ~GiP~iY~~~ll~~~ND~~~~~~t~~~R~inR~~~~~~~~~~~l 414 (495)
T PRK13840 371 PGIPQVYYVGLLAGPNDMELLARTNVGRDINRHYYSTAEIDEAL 414 (495)
T ss_pred CCcceeeechhhccCccHHHHHhcCCCcccCCCCCCHHHHHHHH
Confidence 48999987543223333355677899999998888887777665
No 236
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=33.25 E-value=42 Score=18.05 Aligned_cols=17 Identities=6% Similarity=-0.058 Sum_probs=14.8
Q ss_pred CCCCCCEEEEeeccCCc
Q psy10598 17 GCHGYNILVFGVFPFTS 33 (119)
Q Consensus 17 ~~l~~nv~~~~~~p~~~ 33 (119)
..++..|....|.|.++
T Consensus 8 k~l~~~v~~~~w~P~md 24 (47)
T PF12894_consen 8 KNLPSRVSCMSWCPTMD 24 (47)
T ss_pred cCCCCcEEEEEECCCCC
Confidence 45778899999999999
No 237
>PRK15118 universal stress global response regulator UspA; Provisional
Probab=33.14 E-value=72 Score=20.39 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=16.9
Q ss_pred CeeEEE--EcCCh----hHHHHHH--HhCCCEEEccCc
Q psy10598 45 KCRLFI--THGGV----HSAFESI--YHAVPMVIVPLF 74 (119)
Q Consensus 45 ~~~~~I--~hgG~----~t~~eal--~~g~P~i~~P~~ 74 (119)
.+|++| +||+. ||+.+.+ ...+|++++|..
T Consensus 103 ~~DLIV~Gs~~~~~~~lgSva~~v~~~a~~pVLvv~~~ 140 (144)
T PRK15118 103 DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLR 140 (144)
T ss_pred CCCEEEEeCcccHHHHHHHHHHHHHhhCCCCEEEecCC
Confidence 566665 55542 4455544 346677777653
No 238
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=33.00 E-value=38 Score=24.69 Aligned_cols=23 Identities=22% Similarity=0.280 Sum_probs=17.1
Q ss_pred CeeEEEEcCChhHHHHHHHhCCC
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVP 67 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P 67 (119)
..-++|||||...++=+...+.|
T Consensus 174 ~~vlvVtHggvir~l~~~ll~~~ 196 (247)
T PRK14115 174 KRVLIAAHGNSLRALVKYLDNIS 196 (247)
T ss_pred CeEEEEeChHHHHHHHHHHhCCC
Confidence 34579999998777766666665
No 239
>PF09139 Mmp37: Mitochondrial matrix Mmp37; InterPro: IPR015222 MMp37 is a mitochondrial matrix protein that functions in the translocation of proteins across the mitochondrial inner membrane [].
Probab=32.98 E-value=41 Score=25.98 Aligned_cols=90 Identities=13% Similarity=0.126 Sum_probs=54.5
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEEcC-------ChhHHHHHHHhCCCEEEccCcccHHHHHHH--H-HHcC
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHG-------GVHSAFESIYHAVPMVIVPLFADQKQNGQK--A-EEEG 88 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hg-------G~~t~~eal~~g~P~i~~P~~~dQ~~na~~--~-~~~G 88 (119)
.+..|..-.+++-.. .+ =+ -.+|+.- -|.+++=|=...+|+.++.-..++..+|.. + ...-
T Consensus 85 ~gagvyfN~~v~~~~------~~--iK-YGVis~~~l~~DL~~W~~lYlaGRl~KPV~~l~~~~~~~~~a~~~Nl~sA~~ 155 (330)
T PF09139_consen 85 FGAGVYFNPFVPWNG------RL--IK-YGVISTDDLCRDLLNWNSLYLAGRLQKPVKILRNDDPRLRLANQYNLRSALR 155 (330)
T ss_pred cCCCeeeeccEEeCC------ce--EE-EEEeEHHHHHHHHHhcchhhhcccccCCeeeccCCCHHHHHHHHHHHHHHHH
Confidence 456777777777665 22 11 2233322 134455555678999777533443333322 2 3345
Q ss_pred ceeEecCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 89 YGLMVDFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 89 ~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
+++.+-++.+|.++|..+|..+-+..++|
T Consensus 156 ~ALLlLPe~FtE~~Ly~~Ia~LSY~GD~R 184 (330)
T PF09139_consen 156 AALLLLPESFTEEDLYETIASLSYMGDFR 184 (330)
T ss_pred HHHHhCCcccCHHHHHHHHhccccccccc
Confidence 67777789999999999998876555544
No 240
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=32.82 E-value=1.7e+02 Score=20.62 Aligned_cols=57 Identities=11% Similarity=0.092 Sum_probs=38.1
Q ss_pred hHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeE-ecCCCCCHHHHHHHHHHHhcCc
Q psy10598 56 HSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLM-VDFDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 56 ~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~~i~~~l~~~ 114 (119)
-.+-|.+.+++|.|..=+-.+.....+.+.+.|--++ ++++ +.+.+...|..+|..+
T Consensus 121 ~~ve~vl~~~kpliatlHrrsr~P~v~~ik~~~~v~v~lt~~--NR~~i~~~Il~~L~~~ 178 (179)
T COG1618 121 EAVEEVLKSGKPLIATLHRRSRHPLVQRIKKLGGVYVFLTPE--NRNRILNEILSVLKGE 178 (179)
T ss_pred HHHHHHhcCCCcEEEEEecccCChHHHHhhhcCCEEEEEccc--hhhHHHHHHHHHhccC
Confidence 3455667899998887554555556677777775555 6655 4557777777777543
No 241
>PRK13695 putative NTPase; Provisional
Probab=32.46 E-value=1.6e+02 Score=19.74 Aligned_cols=56 Identities=11% Similarity=0.042 Sum_probs=29.9
Q ss_pred hHHHHHHHhCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10598 56 HSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVL 111 (119)
Q Consensus 56 ~t~~eal~~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l 111 (119)
..+.+++..|.|+|++-....-...+.++...-=|.+.....-+.+++.+.|.+.+
T Consensus 117 ~~l~~~~~~~~~~i~v~h~~~~~~~~~~i~~~~~~~i~~~~~~~r~~~~~~~~~~~ 172 (174)
T PRK13695 117 KAVEEVLDSEKPVIATLHRRSVHPFVQEIKSRPGGRVYELTPENRDSLPFEILNRL 172 (174)
T ss_pred HHHHHHHhCCCeEEEEECchhhHHHHHHHhccCCcEEEEEcchhhhhHHHHHHHHH
Confidence 33445567788888775432212334555543334444434446677777766544
No 242
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=32.45 E-value=42 Score=24.32 Aligned_cols=29 Identities=14% Similarity=0.242 Sum_probs=23.8
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEc
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIV 71 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~ 71 (119)
++ ..++++|+.-. |+++=|.+.|+|++.+
T Consensus 195 li--~~~~l~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 195 LL--ARADLVVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HH--HhCCEEEeeCC-HHHHHHHHcCCCEEEE
Confidence 66 78999999865 5666678899999987
No 243
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=32.10 E-value=42 Score=23.18 Aligned_cols=23 Identities=26% Similarity=0.430 Sum_probs=17.4
Q ss_pred eeEEEEcCChhHHHHHHHhCCCE
Q psy10598 46 CRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 46 ~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
.-++|+|||...++=+...|.|.
T Consensus 147 ~vlvVsHg~~ir~l~~~~~~~~~ 169 (208)
T COG0406 147 NVLVVSHGGVIRALLAYLLGLDL 169 (208)
T ss_pred eEEEEEChHHHHHHHHHhcCCCh
Confidence 46899999988776666666654
No 244
>PRK11761 cysM cysteine synthase B; Provisional
Probab=32.06 E-value=2.1e+02 Score=21.25 Aligned_cols=62 Identities=18% Similarity=0.137 Sum_probs=36.9
Q ss_pred EEEEcCChhH---HHHHHHhCCCEEEc-cCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHH
Q psy10598 48 LFITHGGVHS---AFESIYHAVPMVIV-PLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQV 110 (119)
Q Consensus 48 ~~I~hgG~~t---~~eal~~g~P~i~~-P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~ 110 (119)
++...+|... -+-|...|.|.+++ |-..++ .+.+.++..|+-+++....-+.++..+..+++
T Consensus 66 vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~-~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l 131 (296)
T PRK11761 66 LIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQ-ERRAAMRAYGAELILVPKEQGMEGARDLALQM 131 (296)
T ss_pred EEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCH-HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHH
Confidence 4455555332 33344679999775 876654 56778889998887665422344444444444
No 245
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=31.44 E-value=98 Score=26.13 Aligned_cols=66 Identities=23% Similarity=0.250 Sum_probs=34.6
Q ss_pred CCeeEEEEcC-----ChhHHHHHHHhCCCEEEccCc-ccHHHHHH--HHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10598 44 PKCRLFITHG-----GVHSAFESIYHAVPMVIVPLF-ADQKQNGQ--KAEEEGYGLMVDFDVFDYEELRRKVHQVL 111 (119)
Q Consensus 44 ~~~~~~I~hg-----G~~t~~eal~~g~P~i~~P~~-~dQ~~na~--~~~~~G~g~~l~~~~~~~~~l~~~i~~~l 111 (119)
..|++-|--. | =|-+|+.++|+|.|.--+. +-++.+-. .-...|+-+ ++...-+.++..+.|.+.+
T Consensus 468 ~GcdLgvFPSYYEPWG-YTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~V-vdR~~~n~~e~v~~la~~l 541 (633)
T PF05693_consen 468 RGCDLGVFPSYYEPWG-YTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYV-VDRRDKNYDESVNQLADFL 541 (633)
T ss_dssp HHSSEEEE--SSBSS--HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEE-E-SSSS-HHHHHHHHHHHH
T ss_pred ccCceeeecccccccc-CChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEE-EeCCCCCHHHHHHHHHHHH
Confidence 4566655443 3 4778999999999997653 22222211 112344443 4455667777777776655
No 246
>PF02481 DNA_processg_A: DNA recombination-mediator protein A; InterPro: IPR003488 The SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins. In Helicobacter pylori, dprA is required for natural chromosomal and plasmid transformation []. It has now been shown that DprA is found to bind cooperatively to single-stranded DNA (ssDNA) and to interact with RecA. In the process, DprA-RecA-ssDNA filaments are produced and these filaments catalyse the homology-dependent formation of joint molecules. While the Escherichia coli SSB protein limits access of RecA to ssDNA, DprA alleviates this barrier. It is proposed that DprA is a new member of the recombination-mediator protein family, dedicated to natural bacterial transformation [].; GO: 0009294 DNA mediated transformation; PDB: 3MAJ_A.
Probab=31.03 E-value=77 Score=22.57 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=22.3
Q ss_pred ChhHHHHHHHhCCCEEEccCcc--cHHHHHHHHHHcCceeEe
Q psy10598 54 GVHSAFESIYHAVPMVIVPLFA--DQKQNGQKAEEEGYGLMV 93 (119)
Q Consensus 54 G~~t~~eal~~g~P~i~~P~~~--dQ~~na~~~~~~G~g~~l 93 (119)
...|+-.|+..|+|+.++|... ++..-...+-+.| +..+
T Consensus 170 t~~ta~~A~~~gr~v~~vp~~~~~~~~~G~~~Li~~G-A~~v 210 (212)
T PF02481_consen 170 TLHTARFALEQGRPVFAVPGPIDDPNSEGNNELIKEG-AKLV 210 (212)
T ss_dssp HHHHHHHHHHHT--EEE----TT-GGGHHHHHHHHTT--EE-
T ss_pred HHHHHHHHHHcCCeEEEEeCCCCCcccHHHHHHHHcC-CEee
Confidence 3588889999999999998643 3445556677777 4443
No 247
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=30.75 E-value=40 Score=24.66 Aligned_cols=23 Identities=17% Similarity=0.205 Sum_probs=16.3
Q ss_pred eeEEEEcCChhHHHHHHHhCCCE
Q psy10598 46 CRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 46 ~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
.-++|||||...+.=+...|.|.
T Consensus 177 ~iliVsHggvir~l~~~~~~~~~ 199 (249)
T PRK14120 177 TVLIAAHGNSLRALVKHLDGISD 199 (249)
T ss_pred EEEEEeCHHHHHHHHHHHhCCCH
Confidence 45689999976666666666553
No 248
>PRK13462 acid phosphatase; Provisional
Probab=30.72 E-value=51 Score=23.10 Aligned_cols=22 Identities=23% Similarity=0.448 Sum_probs=16.1
Q ss_pred eeEEEEcCChhHHHHHHHhCCC
Q psy10598 46 CRLFITHGGVHSAFESIYHAVP 67 (119)
Q Consensus 46 ~~~~I~hgG~~t~~eal~~g~P 67 (119)
.-++|+|||....+=+-..|.|
T Consensus 141 ~vliVsHg~vir~ll~~~l~~~ 162 (203)
T PRK13462 141 DVVFVSHGHFSRAVITRWVELP 162 (203)
T ss_pred CEEEEeCCHHHHHHHHHHhCCC
Confidence 4579999997766666666765
No 249
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=30.60 E-value=82 Score=24.11 Aligned_cols=31 Identities=23% Similarity=0.151 Sum_probs=25.7
Q ss_pred CCeeEEEEcCChhHHHHHHH---hCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESIY---HAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~---~g~P~i~~P~~ 74 (119)
-..|.+|.=||-+|...+.. .|+|+|.+|-.
T Consensus 93 ~~Id~LivIGGdgS~~~a~~L~~~gi~vigiPkT 126 (324)
T TIGR02483 93 LGLDALIAIGGDGTLGIARRLADKGLPVVGVPKT 126 (324)
T ss_pred cCCCEEEEECCchHHHHHHHHHhcCCCEEeeccc
Confidence 47899999999988876644 59999999974
No 250
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=30.35 E-value=94 Score=23.10 Aligned_cols=24 Identities=25% Similarity=0.433 Sum_probs=20.0
Q ss_pred EcCChhHHHHHHHhCCCEEEccCc
Q psy10598 51 THGGVHSAFESIYHAVPMVIVPLF 74 (119)
Q Consensus 51 ~hgG~~t~~eal~~g~P~i~~P~~ 74 (119)
+.|-.+..+|+..+|+|.|.+...
T Consensus 103 ySGTVaaA~Ea~~~GipsIA~S~~ 126 (252)
T COG0496 103 YSGTVAAAMEAALLGIPAIAISLA 126 (252)
T ss_pred eeehHHHHHHHHHcCccceeeeeh
Confidence 336678899999999999999764
No 251
>PRK13337 putative lipid kinase; Reviewed
Probab=30.27 E-value=75 Score=23.63 Aligned_cols=30 Identities=27% Similarity=0.354 Sum_probs=23.6
Q ss_pred CCeeEEEEcCChhHHHHHHH--h----CCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESIY--H----AVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~--~----g~P~i~~P~ 73 (119)
...|.+|.-||=||+.|++. . ..|+-++|.
T Consensus 56 ~~~d~vvv~GGDGTl~~vv~gl~~~~~~~~lgiiP~ 91 (304)
T PRK13337 56 RKFDLVIAAGGDGTLNEVVNGIAEKENRPKLGIIPV 91 (304)
T ss_pred cCCCEEEEEcCCCHHHHHHHHHhhCCCCCcEEEECC
Confidence 45689999999999999875 2 346778896
No 252
>KOG2986|consensus
Probab=30.15 E-value=24 Score=26.63 Aligned_cols=63 Identities=14% Similarity=0.106 Sum_probs=42.8
Q ss_pred hhHHHHHHHhCCCEEEc-cCccc-HHHHHHHHHH-cCceeEecCCCCCHHHHHHHHHHHhcCcccc
Q psy10598 55 VHSAFESIYHAVPMVIV-PLFAD-QKQNGQKAEE-EGYGLMVDFDVFDYEELRRKVHQVLYEPKYV 117 (119)
Q Consensus 55 ~~t~~eal~~g~P~i~~-P~~~d-Q~~na~~~~~-~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 117 (119)
|++++=|=...+|+.++ --..| |..|...+.. .-++..+.++.++.++|...|..+-...++|
T Consensus 124 Wn~~YlaGRlqKPV~~l~~~~e~~~~~~s~N~~sAlh~aLLlLpe~Fte~dLy~~I~~LSY~GD~R 189 (313)
T KOG2986|consen 124 WNTFYLAGRLQKPVKILKNDLEDWQDNLSANLRSALHAALLLLPEKFTEFDLYKKIVSLSYAGDIR 189 (313)
T ss_pred hhhheeecccccchHhhhCcHHHHHHHHHHHHHHHHHHHHHhCcccCcHHHHHHHHHhhccccceE
Confidence 56666666788999554 22234 5555555543 4677777888999999999998776555443
No 253
>PRK13055 putative lipid kinase; Reviewed
Probab=29.79 E-value=77 Score=24.03 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=23.7
Q ss_pred CCeeEEEEcCChhHHHHHHHh------CCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESIYH------AVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~~------g~P~i~~P~ 73 (119)
...|++|.-||=||+.|++.. ..|+-++|.
T Consensus 58 ~~~d~vvv~GGDGTl~evvngl~~~~~~~~LgiiP~ 93 (334)
T PRK13055 58 AGFDLIIAAGGDGTINEVVNGIAPLEKRPKMAIIPA 93 (334)
T ss_pred cCCCEEEEECCCCHHHHHHHHHhhcCCCCcEEEECC
Confidence 456899999999999988742 356777896
No 254
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=29.45 E-value=73 Score=24.41 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=22.8
Q ss_pred CCCeeEEEEcCChhHHHHHHH----------------------hCCCEEEccCc
Q psy10598 43 HPKCRLFITHGGVHSAFESIY----------------------HAVPMVIVPLF 74 (119)
Q Consensus 43 ~~~~~~~I~hgG~~t~~eal~----------------------~g~P~i~~P~~ 74 (119)
...+|++|.=|| ||++.+.. .++|.|.+|..
T Consensus 81 ~~~~D~IIavGG-GSviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~P~i~VPTt 133 (357)
T cd08181 81 KFNADFVIGIGG-GSPLDAAKAIAVLIKNPDLKVELYFRSKYLKALPVVAIPTT 133 (357)
T ss_pred hcCCCEEEEeCC-chHHHHHHHHHHHHhCCCcHHHHhcccccCCCCCEEEEeCC
Confidence 357899999998 45555542 16899999975
No 255
>PLN00011 cysteine synthase
Probab=29.38 E-value=2.5e+02 Score=21.16 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=32.8
Q ss_pred eeEEEE-cCChhH---HHHHHHhCCCEEEc-cCcccHHHHHHHHHHcCceeEecCCC
Q psy10598 46 CRLFIT-HGGVHS---AFESIYHAVPMVIV-PLFADQKQNGQKAEEEGYGLMVDFDV 97 (119)
Q Consensus 46 ~~~~I~-hgG~~t---~~eal~~g~P~i~~-P~~~dQ~~na~~~~~~G~g~~l~~~~ 97 (119)
++-+|+ .+|... .+-|..+|.|..++ |...+ ..+.+.++..|+-+++....
T Consensus 69 ~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~-~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 69 KSTLIEATAGNTGIGLACIGAARGYKVILVMPSTMS-LERRIILRALGAEVHLTDQS 124 (323)
T ss_pred CcEEEEeCCChHHHHHHHHHHHcCCeEEEEeCCCCC-HHHHHHHHHcCCEEEEECCC
Confidence 444444 444322 33445679998775 87666 47888899999888765443
No 256
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes. Maleylacetate reductases (MAR) play an important role in the degradation of aromatic compounds in aerobic microbes. In fungi and yeasts, the enzymes are involved in the catabolism of compounds such as phenol, tyrosine, benzoate, 4-hydroxybenzoate and resorcinol. In bacteria, the enzymes contribute to the degradation of resorcinol, 2,4-dihydroxybenzoate ([beta]-resorcylate) and 2,6-dihydroxybenzoate ([gamma]-resorcylate) via hydroxyquinol and maleylacetate. Maleylacetate reductases catalyze NADH- or NADPH-dependent reduction, at the carbon-carbon double bond, of maleylacetate or 2-chloromaleylacetate to 3-oxoadipate. In the case of 2-chloromaleylacetate, Maleylacetate reductases initially catalyses the NAD(P)H-dependent dechlorination to maleylacetate, which is then reduced to 3-oxoadipate. This enzyme is a homodimer. It is inhibited by thiol-blocking reagents such as p-
Probab=29.22 E-value=77 Score=24.04 Aligned_cols=31 Identities=16% Similarity=0.340 Sum_probs=22.9
Q ss_pred CCeeEEEEcCChhHHHHHH-----HhCCCEEEccCcc
Q psy10598 44 PKCRLFITHGGVHSAFESI-----YHAVPMVIVPLFA 75 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal-----~~g~P~i~~P~~~ 75 (119)
..+|.+|.=|| ||++... ..++|.|.+|...
T Consensus 76 ~~~d~IIaiGG-Gs~iD~aK~ia~~~~~p~i~IPTta 111 (337)
T cd08177 76 AGADGIVAIGG-GSTIDLAKAIALRTGLPIIAIPTTL 111 (337)
T ss_pred cCCCEEEEeCC-cHHHHHHHHHHHHhcCCEEEEcCCc
Confidence 57899999988 4444442 3489999999863
No 257
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=29.12 E-value=2.8e+02 Score=23.93 Aligned_cols=61 Identities=15% Similarity=0.199 Sum_probs=39.4
Q ss_pred EcCChhHHHHHHHhCCCEEEccCc-cc---HHHHHHHHHHc-----CceeEecCCCC--------CHHHHHHHHHHHh
Q psy10598 51 THGGVHSAFESIYHAVPMVIVPLF-AD---QKQNGQKAEEE-----GYGLMVDFDVF--------DYEELRRKVHQVL 111 (119)
Q Consensus 51 ~hgG~~t~~eal~~g~P~i~~P~~-~d---Q~~na~~~~~~-----G~g~~l~~~~~--------~~~~l~~~i~~~l 111 (119)
-|+|+-++.-+++.|.-.+++|-. .+ ...-++.+.+. +.++++-.+.+ +.+.+.+.|++-+
T Consensus 195 R~~G~LAl~aalA~gad~iliPE~~~~~~~~~~i~~~l~~~~~~gk~~~iIvvaEG~~d~~g~~i~~~~l~~~l~~~~ 272 (745)
T TIGR02478 195 RHCGYLALMAAIATGADYVFIPERPPEEGWEDQLCHKLKRNRKAGKRKNIVIVAEGAIDRDLNPITSEDVKDVLVERL 272 (745)
T ss_pred ccccHHHHHHHhccCCCEEEecCCCCCchHHHHHHHHHHHHHHcCCCcEEEEEeCCcccccCCcccHHHHHHHHHHhc
Confidence 388999999999999999999864 33 33333444332 56666543333 4566777665544
No 258
>TIGR02699 archaeo_AfpA archaeoflavoprotein AfpA. The prototypical member of this archaeal protein family is AF1518 from Archaeoglobus fulgidus. This homodimer with two non-covalently bound FMN cofactors can receive electrons from ferredoxin, but not from a number of other electron donors such as NADH or rubredoxin. It can then donate electrons to various reductases.
Probab=28.95 E-value=1.5e+02 Score=20.68 Aligned_cols=17 Identities=24% Similarity=0.352 Sum_probs=12.5
Q ss_pred HHHHHHhCCCEEEccCc
Q psy10598 58 AFESIYHAVPMVIVPLF 74 (119)
Q Consensus 58 ~~eal~~g~P~i~~P~~ 74 (119)
+.+++..++|.+++|..
T Consensus 108 ~~~~lk~~~pvvi~P~m 124 (174)
T TIGR02699 108 VIQAAKAKVPVYIMPSD 124 (174)
T ss_pred HHHHhccCCCEEEEECc
Confidence 34445669999999984
No 259
>cd08550 GlyDH-like Glycerol_dehydrogenase-like. Families of proteins related to glycerol dehydrogenases. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site. Some subfamilies have not been characterized till now.
Probab=28.76 E-value=79 Score=24.06 Aligned_cols=30 Identities=27% Similarity=0.504 Sum_probs=22.2
Q ss_pred CCeeEEEEcCChhHHHHHH-----HhCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESI-----YHAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal-----~~g~P~i~~P~~ 74 (119)
.++|++|.=|| ||++.+. ..++|.|.+|..
T Consensus 76 ~~~d~IIavGG-Gs~~D~aK~ia~~~~~p~i~VPTt 110 (349)
T cd08550 76 QEADVIIGVGG-GKTLDTAKAVADRLDKPIVIVPTI 110 (349)
T ss_pred cCCCEEEEecC-cHHHHHHHHHHHHcCCCEEEeCCc
Confidence 57899999988 4444432 349999999974
No 260
>PF00391 PEP-utilizers: PEP-utilising enzyme, mobile domain; InterPro: IPR008279 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. This domain is a "swivelling" beta/beta/alpha domain which is thought to be mobile in all proteins known to contain it []. It is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2X0S_A 2OLS_A 2HRO_A 2E28_A 2WQD_A 3T05_D 3T0T_D 3T07_B 2DIK_A 2FM4_A ....
Probab=28.33 E-value=75 Score=18.76 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=17.6
Q ss_pred CCeeEEEEcCCh---hHHHHHHHhCCCEEEcc
Q psy10598 44 PKCRLFITHGGV---HSAFESIYHAVPMVIVP 72 (119)
Q Consensus 44 ~~~~~~I~hgG~---~t~~eal~~g~P~i~~P 72 (119)
.++..+|+-.|. .+..-|-.+|+|.++-.
T Consensus 29 ~~~~Giv~~~Gg~~SH~aIlAr~~giP~ivg~ 60 (80)
T PF00391_consen 29 QRVAGIVTEEGGPTSHAAILARELGIPAIVGV 60 (80)
T ss_dssp TTSSEEEESSSSTTSHHHHHHHHTT-EEEEST
T ss_pred hheEEEEEEcCCccchHHHHHHHcCCCEEEee
Confidence 556666655553 34445568899999863
No 261
>PRK14071 6-phosphofructokinase; Provisional
Probab=28.12 E-value=94 Score=24.16 Aligned_cols=31 Identities=19% Similarity=0.049 Sum_probs=24.7
Q ss_pred CCeeEEEEcCChhHHHHHHH----hCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESIY----HAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~----~g~P~i~~P~~ 74 (119)
-..|.+|.=||-+|..-+.. .|+|+|.+|-+
T Consensus 106 ~~Id~Li~IGGdgS~~~a~~L~~~~~i~vIgiPkT 140 (360)
T PRK14071 106 LGLDALIGIGGDGSLAILRRLAQQGGINLVGIPKT 140 (360)
T ss_pred cCCCEEEEECChhHHHHHHHHHHhcCCcEEEeccc
Confidence 47899999999988755532 39999999974
No 262
>PF14350 Beta_protein: Beta protein
Probab=27.47 E-value=97 Score=23.54 Aligned_cols=63 Identities=10% Similarity=0.090 Sum_probs=32.4
Q ss_pred EEcCChhH-HHHHH-HhCC---CEEEccCcccHHHHHHHHH---HcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10598 50 ITHGGVHS-AFESI-YHAV---PMVIVPLFADQKQNGQKAE---EEGYGLMVDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 50 I~hgG~~t-~~eal-~~g~---P~i~~P~~~dQ~~na~~~~---~~G~g~~l~~~~~~~~~l~~~i~~~l~ 112 (119)
....|.-. +.+.+ ..|. |++..-...+.......+. ..|+++++...++..+++...|.+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~iPVi~l~~~~~~~~~v~~~~~~~~~~iaiRl~~~~~~~~~~~~~i~~i~~ 147 (347)
T PF14350_consen 77 DSGNHPLNYWIDFLSRLGNQIIPVIGLDRSDDYLRAVRSIARRNGGGIAIRLRPDDLDDDDFPSEISRILA 147 (347)
T ss_pred cccchHHHHHHHHHHHcCCeEEEEEecCCcHHHHHHHHHHHHhcCCeEEEEeecccccchhHHHHHHHHHH
Confidence 33344433 44444 3455 4444433333333333333 356788887776666566666666653
No 263
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=27.46 E-value=68 Score=23.83 Aligned_cols=67 Identities=9% Similarity=0.104 Sum_probs=42.3
Q ss_pred ccccCCCeeEEEEcCChhHHHHHHHhCCCEEEc--cCcccHH----HHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10598 39 YYIPHPKCRLFITHGGVHSAFESIYHAVPMVIV--PLFADQK----QNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 39 ~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~--P~~~dQ~----~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 112 (119)
.++ ..|+++|+--. |..+=|.+.|+|.|.+ |...... .|...+.. . . -...+++++++.++++++|+
T Consensus 249 ali--~~a~l~I~nDS-Gp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~~-~-~--~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 249 RVL--AGAKAVVSVDT-GLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACRS-P-G--KSMADLSAETVFQKLETLIS 321 (322)
T ss_pred HHH--HhCCEEEecCC-cHHHHHHHhCCCEEEEECCCCcccccCCCCCceeecC-C-C--cccccCCHHHHHHHHHHHhh
Confidence 366 78999999765 6777788999999997 4321110 11111100 0 0 01346789999999998874
No 264
>PRK00861 putative lipid kinase; Reviewed
Probab=27.23 E-value=86 Score=23.19 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=24.2
Q ss_pred CCeeEEEEcCChhHHHHHHH----hCCCEEEccC
Q psy10598 44 PKCRLFITHGGVHSAFESIY----HAVPMVIVPL 73 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~----~g~P~i~~P~ 73 (119)
...|++|.-||=||+.|++- .+.|+-++|.
T Consensus 56 ~~~d~vv~~GGDGTl~evv~~l~~~~~~lgviP~ 89 (300)
T PRK00861 56 RGAELIIASGGDGTLSAVAGALIGTDIPLGIIPR 89 (300)
T ss_pred cCCCEEEEECChHHHHHHHHHHhcCCCcEEEEcC
Confidence 45689999999999999863 3677788897
No 265
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=26.65 E-value=3.6e+02 Score=22.12 Aligned_cols=29 Identities=14% Similarity=0.282 Sum_probs=22.7
Q ss_pred CCeeEEEEcCC------hhHHHHHHHhCCCEEEcc
Q psy10598 44 PKCRLFITHGG------VHSAFESIYHAVPMVIVP 72 (119)
Q Consensus 44 ~~~~~~I~hgG------~~t~~eal~~g~P~i~~P 72 (119)
.+..++++|.| .+.+.+|...++|+|++.
T Consensus 62 g~~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 62 GKVGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 34567777766 367889999999999984
No 266
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane]
Probab=26.35 E-value=2.9e+02 Score=21.02 Aligned_cols=41 Identities=17% Similarity=0.351 Sum_probs=22.4
Q ss_pred EEcCChhHHHHHHHhCCCEEEc-cCcccHHHHHHHHHHcCce
Q psy10598 50 ITHGGVHSAFESIYHAVPMVIV-PLFADQKQNGQKAEEEGYG 90 (119)
Q Consensus 50 I~hgG~~t~~eal~~g~P~i~~-P~~~dQ~~na~~~~~~G~g 90 (119)
+.=-|.-.+.|++..|.|+|.+ |+++.=..-+..+.+.|-+
T Consensus 107 ~~v~g~e~l~e~l~~~~gvIl~~~H~gn~E~~~~~l~~~~~~ 148 (308)
T COG1560 107 VEVEGLEHLEEALANGRGVILVTPHFGNWELGGRALAQQGPK 148 (308)
T ss_pred eeecCHHHHHHHHHcCCCEEEEecCcchHHHHHHHHHHhCCC
Confidence 3344566666666666666665 5554444444444444433
No 267
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=25.48 E-value=1.5e+02 Score=17.43 Aligned_cols=43 Identities=21% Similarity=0.342 Sum_probs=25.6
Q ss_pred hCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHH
Q psy10598 64 HAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVH 108 (119)
Q Consensus 64 ~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~ 108 (119)
...|.|++--..+.....+.+ +.|+--.+. +.++.++|.++|+
T Consensus 70 ~~~~ii~~t~~~~~~~~~~~~-~~g~~~~l~-kp~~~~~l~~~i~ 112 (112)
T PF00072_consen 70 PSIPIIVVTDEDDSDEVQEAL-RAGADDYLS-KPFSPEELRAAIN 112 (112)
T ss_dssp TTSEEEEEESSTSHHHHHHHH-HTTESEEEE-SSSSHHHHHHHHH
T ss_pred ccccEEEecCCCCHHHHHHHH-HCCCCEEEE-CCCCHHHHHHhhC
Confidence 367777776555544444444 666554444 3457888887764
No 268
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=25.42 E-value=3.7e+02 Score=21.88 Aligned_cols=69 Identities=12% Similarity=0.225 Sum_probs=44.3
Q ss_pred CCeeEEE-EcCChhHHHH-------------HHHhCCCEEEccCcccH-------HHHHHHHHHcCceeEecCC------
Q psy10598 44 PKCRLFI-THGGVHSAFE-------------SIYHAVPMVIVPLFADQ-------KQNGQKAEEEGYGLMVDFD------ 96 (119)
Q Consensus 44 ~~~~~~I-~hgG~~t~~e-------------al~~g~P~i~~P~~~dQ-------~~na~~~~~~G~g~~l~~~------ 96 (119)
.++|++| .-+-+||+.. .+..+.|++++|-.... ..|-..+.+.|+-++-...
T Consensus 145 ~~aD~~vVAPATANTIAKiA~GiADnLlt~v~La~~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~g~lA~~ 224 (475)
T PRK13982 145 RDCDLIVVAPATADLMAKMANGLADDLASAILLAANRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNAGEMAER 224 (475)
T ss_pred hhcCEEEEeeCCHHHHHHHHccccCcHHHHHHHhcCCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCCCccccC
Confidence 4667654 4444444432 24568999999986443 4788888888876542211
Q ss_pred -------CCCHHHHHHHHHHHhc
Q psy10598 97 -------VFDYEELRRKVHQVLY 112 (119)
Q Consensus 97 -------~~~~~~l~~~i~~~l~ 112 (119)
-.+++++...+.+.+.
T Consensus 225 g~~G~Grm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 225 GEAGVGRMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHh
Confidence 1347889888888774
No 269
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=25.41 E-value=1.4e+02 Score=22.20 Aligned_cols=29 Identities=17% Similarity=0.369 Sum_probs=19.9
Q ss_pred CCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 66 VPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 66 ~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
--+.++|+..|-..-|+++++.|+..++.
T Consensus 122 eGF~VlPY~~~D~v~akrL~d~GcaavMP 150 (247)
T PF05690_consen 122 EGFVVLPYCTDDPVLAKRLEDAGCAAVMP 150 (247)
T ss_dssp TT-EEEEEE-S-HHHHHHHHHTT-SEBEE
T ss_pred CCCEEeecCCCCHHHHHHHHHCCCCEEEe
Confidence 34567788888899999999999887664
No 270
>cd01451 vWA_Magnesium_chelatase Magnesium chelatase: Mg-chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. Magnesium chelatase is a three sub-unit (BchI, BchD and BchH) enzyme with a novel arrangement of domains: the C-terminal helical domain is located behind the nucleotide binding site. The BchD domain contains a AAA domain at its N-terminus and a VWA domain at its C-terminus. The VWA domain has been speculated to be involved in mediating protein-protein interactions.
Probab=25.26 E-value=2.2e+02 Score=19.11 Aligned_cols=46 Identities=7% Similarity=0.092 Sum_probs=27.6
Q ss_pred HhCCCEEEccCccc--HHHHHHHHHHcCceeEecCCCCCHHHHHHHHH
Q psy10598 63 YHAVPMVIVPLFAD--QKQNGQKAEEEGYGLMVDFDVFDYEELRRKVH 108 (119)
Q Consensus 63 ~~g~P~i~~P~~~d--Q~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~ 108 (119)
..|++++.+....+ +..-.+.+++.+-|......+.+...+..+++
T Consensus 130 ~~gi~v~~I~~~~~~~~~~~l~~iA~~tgG~~~~~~d~~~~~~~~~~~ 177 (178)
T cd01451 130 ARGISALVIDTEGRPVRRGLAKDLARALGGQYVRLPDLSADAIASAVR 177 (178)
T ss_pred hcCCcEEEEeCCCCccCccHHHHHHHHcCCeEEEcCcCCHHHHHHHhh
Confidence 45777777765432 23344556666667766666667666666554
No 271
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction was 50-fold lower than that in the forward direction. The NADH-BDH had higher activity with longer chained aldehydes and was inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases.
Probab=24.61 E-value=1e+02 Score=23.76 Aligned_cols=30 Identities=27% Similarity=0.377 Sum_probs=21.4
Q ss_pred CCeeEEEEcCChhHHHHHH---H--------------------hCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESI---Y--------------------HAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal---~--------------------~g~P~i~~P~~ 74 (119)
..+|++|.=||. |++.+. + .++|+|.+|..
T Consensus 85 ~~~D~IIaiGGG-S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTT 137 (382)
T cd08187 85 EKVDFILAVGGG-SVIDSAKAIAAGAPYDGDVWDFFTGKAKIEKALPVGTVLTL 137 (382)
T ss_pred cCCCEEEEeCCh-HHHHHHHHHHhHhhCCCCHHHHhcccCCCCCCCCEEEEeCC
Confidence 578999999884 444432 1 26899999974
No 272
>PRK10736 hypothetical protein; Provisional
Probab=24.25 E-value=2.5e+02 Score=22.09 Aligned_cols=59 Identities=14% Similarity=0.135 Sum_probs=37.1
Q ss_pred CCeeEEEE---cCC-hhHHHHHHHhCCCEEEccCccc--HHHHHHHHHHcCceeEecCCCCCHHHHHHHH
Q psy10598 44 PKCRLFIT---HGG-VHSAFESIYHAVPMVIVPLFAD--QKQNGQKAEEEGYGLMVDFDVFDYEELRRKV 107 (119)
Q Consensus 44 ~~~~~~I~---hgG-~~t~~eal~~g~P~i~~P~~~d--Q~~na~~~~~~G~g~~l~~~~~~~~~l~~~i 107 (119)
..+-++|- ++| ..|.-.|+..|.++.++|-..+ +..=...+-+.|+. .+. +.+++.+.+
T Consensus 219 S~~viVvEA~~kSGsliTA~~Al~~gR~VfavPG~i~~~~s~G~n~LI~~GA~-lv~----~~~Di~~~l 283 (374)
T PRK10736 219 SKGVLVVEAALRSGSLVTARCALEQGRDVFALPGPIGNPGSEGPHWLIKQGAY-LVT----SPEDILENL 283 (374)
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHhCCeEEEEcCCCCCccchhHHHHHHCCCE-EeC----CHHHHHHHh
Confidence 44445554 445 5888899999999999996533 23333455566844 443 456666555
No 273
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=24.21 E-value=78 Score=23.52 Aligned_cols=45 Identities=16% Similarity=0.259 Sum_probs=32.8
Q ss_pred CCCEEEccCcccHHHHHHHHHHcCceeEecCC--------CCCHHHHHHHHHH
Q psy10598 65 AVPMVIVPLFADQKQNGQKAEEEGYGLMVDFD--------VFDYEELRRKVHQ 109 (119)
Q Consensus 65 g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~--------~~~~~~l~~~i~~ 109 (119)
.--++++|+..|-..-|+++++.|+..++... -.++..|.-.+.+
T Consensus 128 ~eGF~VlPY~~dD~v~arrLee~GcaavMPl~aPIGSg~G~~n~~~l~iiie~ 180 (262)
T COG2022 128 KEGFVVLPYTTDDPVLARRLEEAGCAAVMPLGAPIGSGLGLQNPYNLEIIIEE 180 (262)
T ss_pred hCCCEEeeccCCCHHHHHHHHhcCceEeccccccccCCcCcCCHHHHHHHHHh
Confidence 55678889999999999999999998876432 2345555544444
No 274
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=24.05 E-value=42 Score=25.35 Aligned_cols=47 Identities=21% Similarity=0.132 Sum_probs=34.3
Q ss_pred CCeeEEEEcCChhHHH--HHHHhCCCEEEccCcccHHHHHHH-HHHcCce
Q psy10598 44 PKCRLFITHGGVHSAF--ESIYHAVPMVIVPLFADQKQNGQK-AEEEGYG 90 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~--eal~~g~P~i~~P~~~dQ~~na~~-~~~~G~g 90 (119)
|.-.+.=--||+|+++ -|-.+|+-++.+-+..+|..+++. +.+.|..
T Consensus 72 ~G~~lLDiGCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 72 PGMTLLDIGCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CCCEEEEeCCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 4444444456665543 344569999999999999999987 7788987
No 275
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=23.73 E-value=1.5e+02 Score=19.96 Aligned_cols=29 Identities=10% Similarity=0.274 Sum_probs=21.8
Q ss_pred CCeeEEEEcCCh------hHHHHHHHhCCCEEEcc
Q psy10598 44 PKCRLFITHGGV------HSAFESIYHAVPMVIVP 72 (119)
Q Consensus 44 ~~~~~~I~hgG~------~t~~eal~~g~P~i~~P 72 (119)
.+..+++++.|. +.+.+|...+.|+|++.
T Consensus 63 g~~~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~ 97 (172)
T PF02776_consen 63 GRPGVVIVTSGPGATNALTGLANAYADRIPVLVIT 97 (172)
T ss_dssp SSEEEEEEETTHHHHTTHHHHHHHHHTT-EEEEEE
T ss_pred ccceEEEeecccchHHHHHHHhhcccceeeEEEEe
Confidence 456677777763 67788899999999985
No 276
>PF07128 DUF1380: Protein of unknown function (DUF1380); InterPro: IPR009811 This family consists of several hypothetical bacterial proteins of around 140 residues in length. Members of this family seem to be specific to Enterobacteria. The function of this family is unknown.
Probab=23.67 E-value=45 Score=22.54 Aligned_cols=68 Identities=19% Similarity=0.053 Sum_probs=39.2
Q ss_pred CeeEEEEcCChhHHHHHHHhCCCEEEccCc--------ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVPMVIVPLF--------ADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLY 112 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P~i~~P~~--------~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 112 (119)
.++.-|+++....+++-.....+++.+|-. .+|..|.+.-..+-.|....+.-.....-...++.+|+
T Consensus 63 ~~~~GVs~~~V~el~~~~r~~~R~VtVPA~lLe~vl~~A~~~L~~~~~~a~~~~~~~p~~v~~~~~~~~~~r~ll~ 138 (139)
T PF07128_consen 63 RHEEGVSSGTVMELIREVRRAARQVTVPADLLERVLRLAEQALWKREWAAWDAGRPVPESVTRRLADIAQVRALLK 138 (139)
T ss_pred chhccccHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHhhhhhhhcccCCCCCHHHHHHHHHHHHHHHHhc
Confidence 355566665555555555667799999952 67777777766666665544322122233334555554
No 277
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism. 1,3-propanediol dehydrogenase (PPD) plays a role in glycerol metabolism of some bacteria in anaerobic conditions. In this degradation pathway, glycerol is converted in a two-step process to 1,3-propanediol (1,3-PD) which is then excreted into the extracellular medium. The first reaction involves the transformation of glycerol into 3-hydroxypropionaldehyde (3-HPA) by a coenzyme B-12-dependent dehydratase. The second reaction involves the dismutation of the 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol by the NADH-linked 1,3-propanediol dehydrogenase (PPD). The enzyme require iron ion for its function. Because many genes in this pathway are present in the pdu (propanediol utilisation) operon, they are also named pdu genes. PPD is a member of the iron-containing alcohol dehydrogenase superfamily. The PPD structure has a dehydroquinat
Probab=23.46 E-value=1.1e+02 Score=23.06 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=21.4
Q ss_pred CCeeEEEEcCChhHHHHHHH------h------CCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESIY------H------AVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~------~------g~P~i~~P~~ 74 (119)
..+|++|.=|| ||++++.. . ++|+|.+|..
T Consensus 77 ~~~d~IiaiGG-Gs~~D~aKa~a~~~~~~~~~~~~p~i~VPTt 118 (332)
T cd08180 77 FKPDIVIALGG-GSAIDAAKAIIYFAKKLGKKKKPLFIAIPTT 118 (332)
T ss_pred cCCCEEEEECC-chHHHHHHHHHHHHhCCCCCCCCCEEEeCCC
Confidence 57899999888 44444432 1 4799999985
No 278
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=23.45 E-value=3.9e+02 Score=21.90 Aligned_cols=29 Identities=17% Similarity=0.366 Sum_probs=22.5
Q ss_pred CCeeEEEEcCCh------hHHHHHHHhCCCEEEcc
Q psy10598 44 PKCRLFITHGGV------HSAFESIYHAVPMVIVP 72 (119)
Q Consensus 44 ~~~~~~I~hgG~------~t~~eal~~g~P~i~~P 72 (119)
.+..++++|.|- +.+.+|...++|+|++.
T Consensus 67 g~~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 67 GRMGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CCCEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 445677787663 67788899999999995
No 279
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=23.43 E-value=1.2e+02 Score=24.20 Aligned_cols=34 Identities=15% Similarity=0.184 Sum_probs=25.9
Q ss_pred ccCCCeeEEEEcCChhHHHHHHH-------h--CCCEEEccCc
Q psy10598 41 IPHPKCRLFITHGGVHSAFESIY-------H--AVPMVIVPLF 74 (119)
Q Consensus 41 l~~~~~~~~I~hgG~~t~~eal~-------~--g~P~i~~P~~ 74 (119)
|..-..|.+|.=||-+|..-|.. . ++|+|.+|-+
T Consensus 108 L~~~~Id~Li~IGGdgS~~~a~~L~~~~~~~g~~i~vvgIPkT 150 (403)
T PRK06555 108 LAADGVDILHTIGGDDTNTTAADLAAYLAENGYDLTVVGLPKT 150 (403)
T ss_pred HHHcCCCEEEEECChhHHHHHHHHHHHHHHhCCCceEEEeeee
Confidence 33357899999999988766643 2 7999999964
No 280
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=23.28 E-value=74 Score=23.79 Aligned_cols=31 Identities=19% Similarity=0.202 Sum_probs=25.3
Q ss_pred CCeeEEEEcCChhHHHHHHH----hCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESIY----HAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~----~g~P~i~~P~~ 74 (119)
-..|.+|.=||-+|...+.. .++|++.+|-.
T Consensus 91 ~~Id~Li~IGG~gs~~~a~~L~~~~~i~vigiPkT 125 (282)
T PF00365_consen 91 LGIDALIVIGGDGSMKGAHKLSEEFGIPVIGIPKT 125 (282)
T ss_dssp TTESEEEEEESHHHHHHHHHHHHHHHSEEEEEEEE
T ss_pred hCCCEEEEecCCCHHHHHHHHHhcCceEEEEEecc
Confidence 47899999999988877753 46999999963
No 281
>PF12965 DUF3854: Domain of unknown function (DUF3854); InterPro: IPR024385 This is a family of uncharacterised proteins, found by clustering human gut metagenomic sequences [].
Probab=23.17 E-value=1.2e+02 Score=19.99 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=26.1
Q ss_pred cccCCCeeEEEEcCChhHHHHHHHhCCCEEEccC
Q psy10598 40 YIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPL 73 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P~ 73 (119)
++.||..-++||=|.--+ .-++..|.|.|.+|-
T Consensus 5 v~~~p~~pi~ItEG~kKA-~al~s~G~~aIalpG 37 (130)
T PF12965_consen 5 VLDDPNIPIWITEGAKKA-GALLSQGYPAIALPG 37 (130)
T ss_pred eecCCCccEEEEechHHH-HHHHcCCceEEEeCc
Confidence 557788999999988655 345678999999995
No 282
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=22.85 E-value=89 Score=23.22 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=19.1
Q ss_pred EcCChhHHHHHHHhCCCEEEccC
Q psy10598 51 THGGVHSAFESIYHAVPMVIVPL 73 (119)
Q Consensus 51 ~hgG~~t~~eal~~g~P~i~~P~ 73 (119)
+.|-.+..+|+..+|+|.|.+..
T Consensus 111 ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 111 YSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred cchhHHHHHHHHHcCCCeEEEEc
Confidence 34446889999999999999976
No 283
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=22.82 E-value=78 Score=22.28 Aligned_cols=30 Identities=17% Similarity=0.177 Sum_probs=22.9
Q ss_pred ccccCCCeeEEEEcCChhHHHHHHHhCCCEEEc
Q psy10598 39 YYIPHPKCRLFITHGGVHSAFESIYHAVPMVIV 71 (119)
Q Consensus 39 ~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~ 71 (119)
+++ ..++++|+--+ |.++=|.+.|+|+|.+
T Consensus 179 ali--~~a~~~I~~Dt-g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 179 ALI--SRADLVIGNDT-GPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHH--HTSSEEEEESS-HHHHHHHHTT--EEEE
T ss_pred HHH--hcCCEEEecCC-hHHHHHHHHhCCEEEE
Confidence 366 78999999865 6777788899999998
No 284
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=22.78 E-value=73 Score=24.45 Aligned_cols=24 Identities=8% Similarity=-0.031 Sum_probs=18.5
Q ss_pred CeeEEEEcCChhHHHHHHHhCCCE
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVPM 68 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P~ 68 (119)
..-++|+|||...++-+...|.|.
T Consensus 313 ~~vlvVtHg~~ir~ll~~~l~~~~ 336 (372)
T PRK07238 313 ATVLVVSHVTPIKTLLRLALDAGP 336 (372)
T ss_pred CeEEEEEChHHHHHHHHHHhCCCH
Confidence 356799999988777777777654
No 285
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=22.66 E-value=1.6e+02 Score=24.09 Aligned_cols=83 Identities=12% Similarity=0.100 Sum_probs=55.3
Q ss_pred CCCCEEEEeeccCCccccccccccCCCeeEEEE-----cCChhHHHHHHHhCCCEEEccCc--cc----HHHHHHHHHHc
Q psy10598 19 HGYNILVFGVFPFTSHFRKCYYIPHPKCRLFIT-----HGGVHSAFESIYHAVPMVIVPLF--AD----QKQNGQKAEEE 87 (119)
Q Consensus 19 l~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~-----hgG~~t~~eal~~g~P~i~~P~~--~d----Q~~na~~~~~~ 87 (119)
.|.++.+.-|++..-. .+-++.+|.++- -+|. |-++++++|.+-|+-|.. .| -..++ ....
T Consensus 347 ~~~~~~~~i~~~~~la-----~~i~agaD~~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~~ 418 (487)
T COG0297 347 HPGRVLVVIGYDEPLA-----HLIYAGADVILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQGV 418 (487)
T ss_pred cCceEEEEeeecHHHH-----HHHHhcCCEEEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchh--ccCc
Confidence 5667888777764211 233478888773 3454 566999999988887764 22 22222 4556
Q ss_pred CceeEecCCCCCHHHHHHHHHHHh
Q psy10598 88 GYGLMVDFDVFDYEELRRKVHQVL 111 (119)
Q Consensus 88 G~g~~l~~~~~~~~~l~~~i~~~l 111 (119)
|.|..+... +++++..++++.+
T Consensus 419 gtGf~f~~~--~~~~l~~al~rA~ 440 (487)
T COG0297 419 GTGFLFLQT--NPDHLANALRRAL 440 (487)
T ss_pred eeEEEEecC--CHHHHHHHHHHHH
Confidence 788887644 8999999998765
No 286
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=22.62 E-value=3.2e+02 Score=20.12 Aligned_cols=50 Identities=10% Similarity=0.098 Sum_probs=31.4
Q ss_pred EEEEcCChhH---HHHHHHhCCCEEEc-cCcccHHHHHHHHHHcCceeEecCCCC
Q psy10598 48 LFITHGGVHS---AFESIYHAVPMVIV-PLFADQKQNGQKAEEEGYGLMVDFDVF 98 (119)
Q Consensus 48 ~~I~hgG~~t---~~eal~~g~P~i~~-P~~~dQ~~na~~~~~~G~g~~l~~~~~ 98 (119)
++-..+|... -+-|-.+|.|..++ |-..++. ..+.++..|+-+++.....
T Consensus 60 vv~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~-k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 60 IVEPTSGNTGIALAMVAAARGYKLILTMPETMSIE-RRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred EEEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHH-HHHHHHHcCCEEEEECCCC
Confidence 4444455322 23334679998765 8776654 4677888998888765543
No 287
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=22.44 E-value=2.6e+02 Score=22.86 Aligned_cols=29 Identities=17% Similarity=0.363 Sum_probs=23.0
Q ss_pred CCeeEEEEcCCh------hHHHHHHHhCCCEEEcc
Q psy10598 44 PKCRLFITHGGV------HSAFESIYHAVPMVIVP 72 (119)
Q Consensus 44 ~~~~~~I~hgG~------~t~~eal~~g~P~i~~P 72 (119)
.+..++++|.|- +.+.+|...++|+|++.
T Consensus 77 g~~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 77 GKPGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CCCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 456677888774 46789999999999984
No 288
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=22.22 E-value=86 Score=23.50 Aligned_cols=30 Identities=10% Similarity=0.223 Sum_probs=24.3
Q ss_pred CCCEEEccCcccHHHHHHHHHHcCceeEec
Q psy10598 65 AVPMVIVPLFADQKQNGQKAEEEGYGLMVD 94 (119)
Q Consensus 65 g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~ 94 (119)
.--+.++|+..|-..-|+++++.|+..++.
T Consensus 135 ~eGF~VlPY~~~D~v~a~rLed~Gc~aVMP 164 (267)
T CHL00162 135 KKGFTVLPYINADPMLAKHLEDIGCATVMP 164 (267)
T ss_pred HCCCEEeecCCCCHHHHHHHHHcCCeEEee
Confidence 344577788889999999999999887764
No 289
>PF09884 DUF2111: Uncharacterized protein conserved in archaea (DUF2111); InterPro: IPR012029 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, members of PIRSF036667 from PIRSF possess a domain homologous to these proteins fused within a signal transduction sensor protein containing PAS/PAC and GAF domains. Therefore, it is possible that members of this family are involved in signal transduction (possibly as a sensor).
Probab=22.17 E-value=38 Score=20.81 Aligned_cols=17 Identities=29% Similarity=0.725 Sum_probs=13.4
Q ss_pred HHHHHhCCCEEEccCcc
Q psy10598 59 FESIYHAVPMVIVPLFA 75 (119)
Q Consensus 59 ~eal~~g~P~i~~P~~~ 75 (119)
.+.-|.|+|+++.|+..
T Consensus 52 ~~G~Y~G~PViV~PI~~ 68 (84)
T PF09884_consen 52 IEGPYKGVPVIVAPIKD 68 (84)
T ss_pred CCcccCCeeEEEEEEEc
Confidence 34568899999999853
No 290
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=22.06 E-value=1e+02 Score=23.82 Aligned_cols=30 Identities=23% Similarity=0.478 Sum_probs=21.8
Q ss_pred CCeeEEEEcCChhHHHHHH-------------------------HhCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESI-------------------------YHAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal-------------------------~~g~P~i~~P~~ 74 (119)
.++|++|.=|| ||++.+. ..++|+|.+|..
T Consensus 85 ~~~D~IiaiGG-GSviD~aKaia~~~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTT 139 (379)
T TIGR02638 85 SGADYLIAIGG-GSPIDTAKAIGIISNNPEFADVRSLEGVAPTKKPGVPIIAIPTT 139 (379)
T ss_pred cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHhhCCCccCCCCCCEEEECCC
Confidence 57899999988 4444444 125799999985
No 291
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. Lactadehyde:propanediol oxidoreductase (LPO) is a member of the group III iron-activated dehydrogenases which catalyze the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. L-Fucose and L-rhamnose is used by Escherichia coli through an inducible pathway mediated by the fucose regulon comprising four linked oeprons fucO, fucA, fucPIK, and fucR. The fucA-encoded aldolase catalyzes the formation of dihydroxyacetone phosphate and L-lactaldehyde. Under anaerobic conditions, with NADH as a cofactor, lactaldehyde is converted by a fucO-encoded Lactadehyde:propanediol oxidoreductase (LPO) to L-1,2-propanediol, which is excreted as a fermentation product. In mutant strains, E. coli adapted to grow on L-1,2-propanediol, FucO catalyzes the oxidation of the polyol to
Probab=21.98 E-value=1.3e+02 Score=23.24 Aligned_cols=30 Identities=30% Similarity=0.492 Sum_probs=21.5
Q ss_pred CCeeEEEEcCChhHHHHHH---H--------------------hCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESI---Y--------------------HAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal---~--------------------~g~P~i~~P~~ 74 (119)
..+|++|-=|| ||++.+. + .++|+|.+|..
T Consensus 84 ~~~D~IIavGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTt 136 (377)
T cd08176 84 EGCDFIISIGG-GSPHDCAKAIGIVATNGGDIRDYEGVAKSKKPAVPIVAINTT 136 (377)
T ss_pred cCCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhCcCccCCCCCCEEEeCCC
Confidence 47899999988 4444432 1 36899999975
No 292
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=21.85 E-value=93 Score=22.82 Aligned_cols=24 Identities=33% Similarity=0.552 Sum_probs=19.4
Q ss_pred EEcCChhHHHHHHHhCCCEEEccC
Q psy10598 50 ITHGGVHSAFESIYHAVPMVIVPL 73 (119)
Q Consensus 50 I~hgG~~t~~eal~~g~P~i~~P~ 73 (119)
...|-.+..+|+...|+|.|.+-.
T Consensus 105 ~ySGTVgAA~ea~~~GipaiA~S~ 128 (244)
T TIGR00087 105 TYSGTVGAAMEAAIHGVPAIAISL 128 (244)
T ss_pred ecchhHHHHHHHHHcCCCeEEEEe
Confidence 334446889999999999999876
No 293
>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like. Glycerol-1-phosphate dehydrogenase-like. The proteins of this family have not been characterized. The protein sequences have high similarity with that of glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. This family is bacteria specific.
Probab=21.81 E-value=1.3e+02 Score=22.67 Aligned_cols=29 Identities=10% Similarity=0.274 Sum_probs=21.5
Q ss_pred CeeEEEEcCChhHHHHHH-----HhCCCEEEccCc
Q psy10598 45 KCRLFITHGGVHSAFESI-----YHAVPMVIVPLF 74 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal-----~~g~P~i~~P~~ 74 (119)
.+|++|.=|| |++.... ..|+|.|.+|..
T Consensus 75 ~~d~iIaiGG-Gsv~D~aK~vA~~~~~p~i~vPTt 108 (331)
T cd08174 75 NVDAVVGIGG-GKVIDVAKYAAFLRGIPLSVPTTN 108 (331)
T ss_pred CCCEEEEeCC-cHHHHHHHHHHhhcCCCEEEecCc
Confidence 5899998888 4444433 459999999974
No 294
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. 6-hydroxyhexanoate dehydrogenase (HHD). The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. Some bacteria can grow on cyclic ketones, cyclohexylamine, and alcohols as sole carbon source. Cyclohexylamine is an insecticide and antiseptic in various industries and is considered a possible environmental pollutant. The degradation of these chemical compounds are through the cyclohexanol and cyclohexanone biological oxidation pathway. The intermediates of this pathway include cyclohexanol, cyclohexanone, e-caprolactone, 6-hydroxyhexanoate, 6-oxohexanoate and adipate. The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate.
Probab=21.80 E-value=1.3e+02 Score=23.38 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=21.5
Q ss_pred CCeeEEEEcCChhHHHHHH---H--h------------------CCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESI---Y--H------------------AVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal---~--~------------------g~P~i~~P~~ 74 (119)
.++|++|.=||. |++.+. + . ++|.|.+|..
T Consensus 78 ~~~D~IIaiGGG-S~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt 130 (386)
T cd08191 78 AGPDVIIGLGGG-SCIDLAKIAGLLLAHGGDVRDYYGEFKVPGPVLPLIAVPTT 130 (386)
T ss_pred cCCCEEEEeCCc-hHHHHHHHHHHHHhCCCCHHHHhCccccCCCCCCEEEEeCC
Confidence 578999999884 444432 1 1 7899999975
No 295
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.78 E-value=2.5e+02 Score=19.71 Aligned_cols=38 Identities=11% Similarity=0.133 Sum_probs=29.4
Q ss_pred HHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCc
Q psy10598 77 QKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEP 114 (119)
Q Consensus 77 Q~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 114 (119)
+..|+.+.++.|.=.++-.+..+.+++.++..+-|.|+
T Consensus 110 ~~LN~aY~~rFgfPfI~aVkg~~k~~Il~a~~~Rl~n~ 147 (176)
T COG3195 110 TELNAAYVERFGFPFIIAVKGNTKDTILAAFERRLDND 147 (176)
T ss_pred HHHHHHHHHhcCCceEEeecCCCHHHHHHHHHHHhccc
Confidence 34688999999987776666778888888888777664
No 296
>PF09989 DUF2229: CoA enzyme activase uncharacterised domain (DUF2229); InterPro: IPR018709 Proteins containing this domain include various bacterial hypothetical proteins, as well as CoA enzyme activases. The exact function of this domain has not, as yet, been defined.
Probab=21.57 E-value=2.5e+02 Score=20.12 Aligned_cols=38 Identities=16% Similarity=0.026 Sum_probs=26.6
Q ss_pred ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 75 ADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 75 ~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
.+.+.+...++++|+.+++.+. .+.+-+...++...++
T Consensus 12 ~~~p~W~~FF~~LG~~Vv~S~~-T~k~i~~~G~~~~~~e 49 (221)
T PF09989_consen 12 EYYPFWQTFFTELGFEVVLSPP-TNKEILDKGVKSAPSE 49 (221)
T ss_pred hhhHHHHHHHHHcCCEEEECCC-CcHHHHHHHhhhCCCC
Confidence 6778899999999999988753 3445555555555443
No 297
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=21.50 E-value=54 Score=22.79 Aligned_cols=28 Identities=14% Similarity=0.284 Sum_probs=21.2
Q ss_pred eeEEEEcCChhHH--HHHHHhCCCEEEccC
Q psy10598 46 CRLFITHGGVHSA--FESIYHAVPMVIVPL 73 (119)
Q Consensus 46 ~~~~I~hgG~~t~--~eal~~g~P~i~~P~ 73 (119)
=|++|.|.|+|-. +.-+.-+.|+|...-
T Consensus 67 PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 67 PDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred CCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 3899999999754 344667999998754
No 298
>COG0379 NadA Quinolinate synthase [Coenzyme metabolism]
Probab=21.42 E-value=3.4e+02 Score=21.01 Aligned_cols=45 Identities=11% Similarity=0.115 Sum_probs=36.6
Q ss_pred CCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHHHHHhCCCEEEcc
Q psy10598 21 YNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVP 72 (119)
Q Consensus 21 ~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~eal~~g~P~i~~P 72 (119)
++..++.|+.-+.. += +.+|.++|.+-+--+.|.+.-+.++|..|
T Consensus 122 P~~~vV~YvNtsA~-----vK--A~~Di~cTSsNAvkvVe~~~~~~~Iif~P 166 (324)
T COG0379 122 PDAPVVTYVNTSAE-----VK--AEADICCTSSNAVKVVESALDGDKILFLP 166 (324)
T ss_pred CCCceEEEeeChHH-----HH--hhcCeEEecchHHHHHHhccCCCcEEEcC
Confidence 37888999988764 44 78899999999999999885667777776
No 299
>PRK06112 acetolactate synthase catalytic subunit; Validated
Probab=21.37 E-value=1.2e+02 Score=24.76 Aligned_cols=29 Identities=21% Similarity=0.322 Sum_probs=23.5
Q ss_pred CCeeEEEEcCChhH------HHHHHHhCCCEEEcc
Q psy10598 44 PKCRLFITHGGVHS------AFESIYHAVPMVIVP 72 (119)
Q Consensus 44 ~~~~~~I~hgG~~t------~~eal~~g~P~i~~P 72 (119)
.+..+++++.|.|. +.||...++|+|++.
T Consensus 73 g~~gv~~~t~GpG~~N~~~gl~~A~~~~~Pvl~I~ 107 (578)
T PRK06112 73 GKVAVVTAQNGPAATLLVAPLAEALKASVPIVALV 107 (578)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 45667778888665 999999999999984
No 300
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=21.28 E-value=1.3e+02 Score=23.10 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=21.6
Q ss_pred CCeeEEEEcCChhHHHHHH---H--------------------hCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESI---Y--------------------HAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal---~--------------------~g~P~i~~P~~ 74 (119)
.++|++|.=||. |++.+. + .++|.|.+|..
T Consensus 82 ~~~D~IIaiGGG-s~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTT 134 (376)
T cd08193 82 AGADGVIGFGGG-SSMDVAKLVAVLAGSDQPLADMYGVDLVAGPRLPLILVPTT 134 (376)
T ss_pred cCCCEEEEeCCc-hHHHHHHHHHHHHHCCCCHHHHhCCCccCCCCCCEEEeCCC
Confidence 578999999984 444432 1 26899999975
No 301
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=21.24 E-value=1.9e+02 Score=19.30 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=21.2
Q ss_pred cccCCCeeEEEEcCChhH--HHHHH-HhCCCEEEccC
Q psy10598 40 YIPHPKCRLFITHGGVHS--AFESI-YHAVPMVIVPL 73 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t--~~eal-~~g~P~i~~P~ 73 (119)
+++ -+-|++|..++.+. ..+.+ ..|+|.+.++.
T Consensus 65 ll~-l~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~~ 100 (186)
T cd01141 65 IVA-LKPDLVILYGGFQAQTILDKLEQLGIPVLYVNE 100 (186)
T ss_pred Hhc-cCCCEEEEecCCCchhHHHHHHHcCCCEEEeCC
Confidence 443 57788877655432 44444 67889988875
No 302
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=21.23 E-value=1.5e+02 Score=22.70 Aligned_cols=31 Identities=13% Similarity=0.050 Sum_probs=24.5
Q ss_pred CCeeEEEEcCChhHHHHHHH---h------CCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESIY---H------AVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~---~------g~P~i~~P~~ 74 (119)
-..+.+|.=||-+|...+.. . ++|++.+|-.
T Consensus 91 ~~I~~Lv~IGGd~s~~~a~~L~e~~~~~~~~i~vigiPkT 130 (338)
T cd00363 91 HGIDALVVIGGDGSYTGADLLTEEWPSKYQGFNVIGLPGT 130 (338)
T ss_pred hCCCEEEEeCCHHHHHHHHHHHHHHHhcCCCccEEEeeec
Confidence 47889999999888766532 2 8999999974
No 303
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. Dehydroquinate synthase-like. This group contains dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. They exhibit the dehydroquinate synthase structural fold. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes ne
Probab=20.85 E-value=1.6e+02 Score=22.57 Aligned_cols=30 Identities=13% Similarity=0.348 Sum_probs=20.9
Q ss_pred CCeeEEEEcCChhHHHHH-------HHhCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFES-------IYHAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~ea-------l~~g~P~i~~P~~ 74 (119)
.++|++|.=||. ++... ...|+|.+.+|..
T Consensus 82 ~r~d~IIaiGGG-sv~D~ak~vA~~~~rgip~i~VPTT 118 (344)
T cd08169 82 NRRTAIVAVGGG-ATGDVAGFVASTLFRGIAFIRVPTT 118 (344)
T ss_pred CCCcEEEEECCc-HHHHHHHHHHHHhccCCcEEEecCC
Confidence 458999998884 22222 1349999999974
No 304
>COG5310 Homospermidine synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.64 E-value=74 Score=25.06 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=23.4
Q ss_pred CCCEEEEeeccCCccccccccccCCCeeEEEEcCChhHHHH
Q psy10598 20 GYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFE 60 (119)
Q Consensus 20 ~~nv~~~~~~p~~~~~~~~~ll~~~~~~~~I~hgG~~t~~e 60 (119)
..|.++..|+|..- ++..++|+|+-+-|+..
T Consensus 278 g~ntrvrswcp~~g----------~qyg~lvthneaisiad 308 (481)
T COG5310 278 GANTRVRSWCPTLG----------AQYGLLVTHNEAISIAD 308 (481)
T ss_pred CCCceeeeeCCCcc----------ceeeEEEecCceeeeee
Confidence 46899999999875 46788888886655543
No 305
>TIGR03852 sucrose_gtfA sucrose phosphorylase. In the forward direction, this enzyme uses phosphate to cleave sucrose into D-fructose + alpha-D-glucose 1-phosphate. Characterized representatives from Streptococcus mutans and Bifidobacterium adolescentis represent well-separated branches of a molecular phylogenetic tree. In S. mutans, the region including this gene has been associated with neighboring transporter genes and multiple sugar metabolism.
Probab=20.58 E-value=1.1e+02 Score=24.89 Aligned_cols=45 Identities=20% Similarity=0.231 Sum_probs=30.8
Q ss_pred hCCCEEEccCcccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHH
Q psy10598 64 HAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVH 108 (119)
Q Consensus 64 ~g~P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~~i~ 108 (119)
-|+|+|.+.-..--..+-..+++.|.++-++....+.+++..++.
T Consensus 361 pGiP~iYy~~llg~~nD~~~~~rt~~~R~Inr~~~~~~~i~~~l~ 405 (470)
T TIGR03852 361 PGIPQVYYVGLLAGKNDIELLEETKEGRNINRHYYTLEEIAEEVK 405 (470)
T ss_pred CCCceEEechhhcCCchHHHHHhcCCCCCCCCCCCCHHHHHHHHh
Confidence 489998875332223344667788888889888888777776553
No 306
>PRK14072 6-phosphofructokinase; Provisional
Probab=20.55 E-value=1.5e+02 Score=23.59 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=24.4
Q ss_pred CCeeEEEEcCChhHHHHHHH-------hC--CCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESIY-------HA--VPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~-------~g--~P~i~~P~~ 74 (119)
-..|.+|.=||-+|..-|.. .| +|+|.+|-+
T Consensus 102 ~~Id~LivIGGdgS~~~a~~L~e~~~~~g~~i~vIgIPkT 141 (416)
T PRK14072 102 HDIGYFFYNGGNDSMDTALKVSQLAKKMGYPIRCIGIPKT 141 (416)
T ss_pred cCCCEEEEECChHHHHHHHHHHHHHHHhCCCceEEEeeec
Confidence 57899999999988865532 45 999999974
No 307
>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional
Probab=20.55 E-value=3.4e+02 Score=20.65 Aligned_cols=64 Identities=9% Similarity=-0.028 Sum_probs=42.1
Q ss_pred EcCChhHHHHHHHhCCCEEEccCcc-------cH---------------------HH-HHHHHHHcCceeEecCCCCCHH
Q psy10598 51 THGGVHSAFESIYHAVPMVIVPLFA-------DQ---------------------KQ-NGQKAEEEGYGLMVDFDVFDYE 101 (119)
Q Consensus 51 ~hgG~~t~~eal~~g~P~i~~P~~~-------dQ---------------------~~-na~~~~~~G~g~~l~~~~~~~~ 101 (119)
.|+|...+..|+..+.|++++-..+ -| .. -...+...|+.-+....-.++.
T Consensus 105 ~~~g~~~l~~A~~~~~~v~~vv~dN~~~~~TGgQ~S~~Tp~ga~t~tsp~G~~~~kkdi~~i~~a~g~~yVA~~~~~~~~ 184 (300)
T PRK11864 105 ADIGFQALSGAAERNHDILYIMYDNEAYMNTGIQRSSSTPYGAWTTTTPGGKREHKKPVPDIMAAHKVPYVATASIAYPE 184 (300)
T ss_pred ccccHHHHHHHHHhCcCEEEEEECCeeeecCCCCCCCCCcCCCccccCCCCCcCCCCCHHHHHHHcCCCEEEEEeCCCHH
Confidence 6888899999999999998885421 11 11 2333455665443333335788
Q ss_pred HHHHHHHHHhcCc
Q psy10598 102 ELRRKVHQVLYEP 114 (119)
Q Consensus 102 ~l~~~i~~~l~~~ 114 (119)
++.+++++.++.+
T Consensus 185 ~~~~~i~~A~~~~ 197 (300)
T PRK11864 185 DFIRKLKKAKEIR 197 (300)
T ss_pred HHHHHHHHHHhCC
Confidence 8999999887543
No 308
>PRK12361 hypothetical protein; Provisional
Probab=20.37 E-value=1.2e+02 Score=24.75 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=24.7
Q ss_pred CCeeEEEEcCChhHHHHHHH----hCCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESIY----HAVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal~----~g~P~i~~P~~ 74 (119)
...|.+|.-||=||+.|.+. .++|+-++|..
T Consensus 296 ~~~d~Viv~GGDGTl~ev~~~l~~~~~~lgiiP~G 330 (547)
T PRK12361 296 AGADIVIACGGDGTVTEVASELVNTDITLGIIPLG 330 (547)
T ss_pred cCCCEEEEECCCcHHHHHHHHHhcCCCCEEEecCC
Confidence 45689999999999988873 36788888963
No 309
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=20.30 E-value=1.4e+02 Score=22.78 Aligned_cols=30 Identities=27% Similarity=0.543 Sum_probs=21.1
Q ss_pred CCeeEEEEcCChhHHHHHH-----Hh------------------CCCEEEccCc
Q psy10598 44 PKCRLFITHGGVHSAFESI-----YH------------------AVPMVIVPLF 74 (119)
Q Consensus 44 ~~~~~~I~hgG~~t~~eal-----~~------------------g~P~i~~P~~ 74 (119)
..+|++|.=||. |++... .. ++|.|.+|..
T Consensus 79 ~~~d~IiaiGGG-s~~D~AK~va~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTt 131 (370)
T cd08551 79 EGCDGVIAVGGG-SVLDTAKAIALLATNPGDIWDYEGGKPVIKPALPLIAIPTT 131 (370)
T ss_pred cCCCEEEEeCCc-hHHHHHHHHHHHHhCCCcHHHHhCcccccCCCCCEEEecCC
Confidence 478999999884 333321 22 7899999985
No 310
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=20.19 E-value=1e+02 Score=21.29 Aligned_cols=24 Identities=25% Similarity=0.409 Sum_probs=15.6
Q ss_pred HHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10598 85 EEEGYGLMVDFDVFDYEELRRKVHQVLYE 113 (119)
Q Consensus 85 ~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 113 (119)
++-|+|+.+ |++++.++|.+.+.+
T Consensus 109 ~~cGVGV~V-----T~E~I~~~V~~~i~~ 132 (164)
T PF04558_consen 109 KACGVGVVV-----TPEQIEAAVEKYIEE 132 (164)
T ss_dssp HTTTTT---------HHHHHHHHHHHHHH
T ss_pred HHcCCCeEE-----CHHHHHHHHHHHHHH
Confidence 445888887 689999999888753
No 311
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=20.15 E-value=1.2e+02 Score=22.62 Aligned_cols=32 Identities=6% Similarity=0.188 Sum_probs=22.4
Q ss_pred cccCCCeeEEEEcCChhH------HHHHHHhCCCEEEc
Q psy10598 40 YIPHPKCRLFITHGGVHS------AFESIYHAVPMVIV 71 (119)
Q Consensus 40 ll~~~~~~~~I~hgG~~t------~~eal~~g~P~i~~ 71 (119)
++..-++|++||.-..++ +.-|...|+|+|++
T Consensus 191 ll~q~~id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I 228 (257)
T COG2099 191 LLEQYRIDVVVTKNSGGAGGTYEKIEAARELGIPVIMI 228 (257)
T ss_pred HHHHhCCCEEEEccCCcccCcHHHHHHHHHcCCcEEEE
Confidence 343358999998643333 55577889999998
No 312
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=20.07 E-value=5.3e+02 Score=22.49 Aligned_cols=61 Identities=13% Similarity=0.233 Sum_probs=38.6
Q ss_pred EcCChhHHHHHHHhCCCEEEccCc-cc---HHHHHHHHHH-----cCceeEecCCC--------CCHHHHHHHHHHHh
Q psy10598 51 THGGVHSAFESIYHAVPMVIVPLF-AD---QKQNGQKAEE-----EGYGLMVDFDV--------FDYEELRRKVHQVL 111 (119)
Q Consensus 51 ~hgG~~t~~eal~~g~P~i~~P~~-~d---Q~~na~~~~~-----~G~g~~l~~~~--------~~~~~l~~~i~~~l 111 (119)
-|+|+-+++-+++.|.-.+++|-. .+ ...-.+.+.+ .+.++++-.+. .+.+.+.+.|.+.+
T Consensus 198 R~~G~LAl~aglA~gAd~ilIPE~p~~~~~~~~i~~~l~~~~~~gk~~~iIVVaEGa~d~~g~~i~~~~l~~~l~~~~ 275 (762)
T cd00764 198 RHCGYLALVSGLATGADWIFIPERPPEDGWEDQMCRRLSEHRSRGKRLNIIIVAEGAIDDQLKPITSEDVKDLVVERL 275 (762)
T ss_pred CCchHHHHHHHhccCCCEEEecCCCCchhHHHHHHHHHHHHHhcCCCcEEEEEeCCCccccCCCccHHHHHHHHHHhc
Confidence 489999999999999889999864 33 2333344433 25666554333 23456666665543
No 313
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=20.03 E-value=1e+02 Score=19.86 Aligned_cols=23 Identities=30% Similarity=0.469 Sum_probs=16.2
Q ss_pred CeeEEEEcCChhHHHHHHHhCCC
Q psy10598 45 KCRLFITHGGVHSAFESIYHAVP 67 (119)
Q Consensus 45 ~~~~~I~hgG~~t~~eal~~g~P 67 (119)
..-++|+|||.-..+-....|.|
T Consensus 100 ~~iliV~H~~~i~~~~~~l~~~~ 122 (153)
T cd07067 100 KNVLIVSHGGVLRALLAYLLGLS 122 (153)
T ss_pred CeEEEEeChHHHHHHHHHHhCCC
Confidence 45679999997666655555655
Done!