RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10598
(119 letters)
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
29760]}
Length = 450
Score = 74.8 bits (182), Expect = 1e-17
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 43 HPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVDFDVFDYE 101
H F+TH G +S +ES+ VP++ P F DQ+ NG+ E+ G+ ++ VF
Sbjct: 335 HEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKS 394
Query: 102 ELRRKVHQVLYEPKY 116
L Q+L + K
Sbjct: 395 GLMSCFDQILSQEKG 409
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 70.1 bits (170), Expect = 6e-16
Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 5/87 (5%)
Query: 34 HFRKCYYIPHP----KCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGY 89
+ + I HG + + VP +++P DQ + G
Sbjct: 287 DCFAIDEVNFQALFRRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGI 346
Query: 90 GLMVDFDVFDYEELRRKVHQVLYEPKY 116
G+ D +E L + VL P+
Sbjct: 347 GVAHDGPTPTFESLSAALTTVL-APET 372
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 401
Score = 69.7 bits (169), Expect = 7e-16
Identities = 19/102 (18%), Positives = 33/102 (32%), Gaps = 9/102 (8%)
Query: 15 SPGCHGYNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLF 74
G + G F + I HGG + + P +++P
Sbjct: 279 VLPDDGADCFAIGEVNHQVLF--------GRVAAVIHHGGAGTTHVAARAGAPQILLPQM 330
Query: 75 ADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEPKY 116
ADQ + E G G+ D + ++ L + L P+
Sbjct: 331 ADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATAL-TPET 371
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase
{Medicago truncatula [TaxId: 3880]}
Length = 473
Score = 66.0 bits (159), Expect = 2e-14
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 43 HPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVDFDVFDYE 101
HP F+TH G +S ESI VPM+ P FADQ + + E G+ +D +V E
Sbjct: 362 HPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNV-KRE 420
Query: 102 ELRRKVHQVLYEPKY 116
EL + +++V+ K
Sbjct: 421 ELAKLINEVIAGDKG 435
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase
UGT71G1 {Medicago truncatula [TaxId: 3880]}
Length = 461
Score = 63.2 bits (152), Expect = 2e-13
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 43 HPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVDFD----- 96
H F++H G +S ES++ VP++ P++A+Q+ N + +E G GL + D
Sbjct: 346 HKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGS 405
Query: 97 -VFDYEELRRKVHQVLYEPKYV 117
V EE+ + + ++ + V
Sbjct: 406 DVVAAEEIEKGLKDLMDKDSIV 427
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 60.5 bits (145), Expect = 1e-12
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 43 HPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVDFD---VF 98
HP F+TH G +S ES+ +P++ PL+A+QK N E+ L +
Sbjct: 350 HPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLV 409
Query: 99 DYEELRRKVHQVLYEPK 115
EE+ R V ++ +
Sbjct: 410 RREEVARVVKGLMEGEE 426
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 391
Score = 57.4 bits (137), Expect = 2e-11
Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 9/92 (9%)
Query: 33 SHFRKCYYIPHP----KCRLFITHGGVHSAFESIYHAVPMVIVPLFAD----QKQNGQKA 84
+ + + I H + ++ +P ++V D Q + +
Sbjct: 270 ADCFVVGEVNLQELFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRV 329
Query: 85 EEEGYGLMVDFDVFDYEELRRKVHQVLYEPKY 116
E G G+ VD V + L + L P+
Sbjct: 330 AELGVGVAVDGPVPTIDSLSAALDTAL-APEI 360
>d2exha1 b.29.1.23 (A:325-535) Beta-D-xylosidase C-terminal domain
{Geobacillus stearothermophilus [TaxId: 1422]}
Length = 211
Score = 25.8 bits (56), Expect = 1.5
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 87 EGYGLMVDFDVFDYEEL 103
G DFD F Y+EL
Sbjct: 195 SGQNNYADFDYFLYKEL 211
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 123
Score = 25.2 bits (55), Expect = 1.9
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
Query: 61 SIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDV--FDYEELRRKVHQVL 111
+ + P VI+ Q+ +KA E G F + FD E L + QV
Sbjct: 71 AGFEHQPNVIMLTAFGQEDVTKKAVELG---ASYFILKPFDMENLAHHIRQVY 120
>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 290
Score = 25.1 bits (55), Expect = 2.5
Identities = 19/88 (21%), Positives = 26/88 (29%), Gaps = 19/88 (21%)
Query: 21 YNILVFGVFP---FTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQ 77
+ L F VF + H +Y P P + VP++ P FA
Sbjct: 139 LSGLAFRVFHCTQYVRHSSDPFYTPEPDT------------CHELLGHVPLLAEPSFAQF 186
Query: 78 KQN----GQKAEEEGYGLMVDFDVFDYE 101
Q A EE + F E
Sbjct: 187 SQEIGLASLGASEEAVQKLATCYFFTVE 214
>d1y7ba1 b.29.1.23 (A:325-534) Beta-D-xylosidase C-terminal domain
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 210
Score = 25.0 bits (54), Expect = 2.7
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 88 GYGLMVDFDVFDYEE 102
G DFD F Y+E
Sbjct: 196 GNNKPADFDYFCYKE 210
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium
carotovorum [TaxId: 554]}
Length = 204
Score = 24.6 bits (53), Expect = 3.9
Identities = 9/46 (19%), Positives = 15/46 (32%)
Query: 70 IVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEPK 115
LF +Q + QK E E + +++ L E
Sbjct: 31 NGYLFIEQNGHYQKCEMERGTAYLIGSLYNRTFLIGLAGVWEGEAY 76
>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 336
Score = 24.4 bits (53), Expect = 4.3
Identities = 14/64 (21%), Positives = 19/64 (29%), Gaps = 9/64 (14%)
Query: 21 YNILVFGVFPFTSHFRKCYYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQN 80
L F VF T + R H + + VPM+ FA Q+
Sbjct: 139 LASLAFRVFQCTQYIR------HASSPMHSPEPDC---CHELLGHVPMLADRTFAQFSQD 189
Query: 81 GQKA 84
A
Sbjct: 190 IGLA 193
>d1yrza1 b.29.1.23 (A:1321-1525) Beta-D-xylosidase C-terminal domain
{Bacillus halodurans [TaxId: 86665]}
Length = 205
Score = 23.9 bits (51), Expect = 5.3
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 87 EGYGLMVDFDVFDYEE 102
G DFD F Y+E
Sbjct: 190 SGTKKPADFDYFRYKE 205
>d1u09a_ e.8.1.4 (A:) Viral RNA polymerase {Foot-and-mouth disease
virus [TaxId: 12110]}
Length = 476
Score = 24.1 bits (52), Expect = 6.1
Identities = 12/71 (16%), Positives = 19/71 (26%), Gaps = 3/71 (4%)
Query: 49 FITHGGVHSAFESIYHAV--PMVIVP-LFADQKQNGQKAEEEGYGLMVDFDVFDYEELRR 105
F+ Y V + L ++ Q+ GL V +Y L
Sbjct: 385 FLKRHFHMDYGTGFYKPVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFE 444
Query: 106 KVHQVLYEPKY 116
+ P Y
Sbjct: 445 PFQGLFEIPSY 455
>d1kfsa2 e.8.1.1 (A:519-928) DNA polymerase I (Klenow fragment)
{Escherichia coli [TaxId: 562]}
Length = 410
Score = 24.0 bits (51), Expect = 7.0
Identities = 12/59 (20%), Positives = 27/59 (45%)
Query: 56 HSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEP 114
H +++ + M +VP+ + ++NG K + + + EL +K H++ E
Sbjct: 1 HKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEE 59
>d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 184
Score = 23.5 bits (50), Expect = 7.9
Identities = 5/26 (19%), Positives = 10/26 (38%)
Query: 35 FRKCYYIPHPKCRLFITHGGVHSAFE 60
+R + R ++ GV S +
Sbjct: 82 YRTDLNVDDTSSRTYLDFSGVLSKAD 107
>d1yifa1 b.29.1.23 (A:325-533) Beta-D-xylosidase C-terminal domain
{Bacillus subtilis [TaxId: 1423]}
Length = 209
Score = 23.5 bits (50), Expect = 8.6
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 88 GYGLMVDFDVFDYEE 102
G + DF F Y+E
Sbjct: 194 GNHIPADFRYFRYKE 208
>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo
sapiens) [TaxId: 9606]}
Length = 307
Score = 23.6 bits (51), Expect = 8.9
Identities = 13/59 (22%), Positives = 16/59 (27%), Gaps = 15/59 (25%)
Query: 21 YNILVFGVFPFTSHFRKC---YYIPHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFAD 76
L F VF T + R Y P P + VP+ FA
Sbjct: 138 LGGLAFRVFHCTQYIRHGSKPMYTPEPDI------------CHELLGHVPLFSDRSFAQ 184
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.329 0.146 0.467
Gapped
Lambda K H
0.267 0.0593 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 485,684
Number of extensions: 21286
Number of successful extensions: 70
Number of sequences better than 10.0: 1
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 21
Length of query: 119
Length of database: 2,407,596
Length adjustment: 74
Effective length of query: 45
Effective length of database: 1,391,576
Effective search space: 62620920
Effective search space used: 62620920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 47 (22.2 bits)