RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10599
(112 letters)
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
29760]}
Length = 450
Score = 73.6 bits (179), Expect = 3e-17
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 35 AHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVDFDVFDY 93
AH F+TH G +S +ES+ VP++ P F DQ+ NG+ E+ G+ ++ VF
Sbjct: 334 AHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTK 393
Query: 94 EELRRKVHQVLYEPKY 109
L Q+L + K
Sbjct: 394 SGLMSCFDQILSQEKG 409
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 68.9 bits (167), Expect = 1e-15
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 36 HPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEE 95
+ I HG + + VP +++P DQ + G G+ D +E
Sbjct: 300 FRRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFES 359
Query: 96 LRRKVHQVLYEPKY 109
L + VL P+
Sbjct: 360 LSAALTTVL-APET 372
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 401
Score = 67.8 bits (164), Expect = 3e-15
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 35 AHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDVFDYE 94
+ I HGG + + P +++P ADQ + E G G+ D + ++
Sbjct: 298 LFGRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFD 357
Query: 95 ELRRKVHQVLYEPKY 109
L + L P+
Sbjct: 358 SLSAALATAL-TPET 371
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase
{Medicago truncatula [TaxId: 3880]}
Length = 473
Score = 65.6 bits (158), Expect = 2e-14
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 35 AHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVDFDVFDY 93
HP F+TH G +S ESI VPM+ P FADQ + + E G+ +D +V
Sbjct: 361 NHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNV-KR 419
Query: 94 EELRRKVHQVLYEPKY 109
EEL + +++V+ K
Sbjct: 420 EELAKLINEVIAGDKG 435
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase
UGT71G1 {Medicago truncatula [TaxId: 3880]}
Length = 461
Score = 61.7 bits (148), Expect = 4e-13
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 35 AHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVDFD---- 89
AH F++H G +S ES++ VP++ P++A+Q+ N + +E G GL + D
Sbjct: 345 AHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKG 404
Query: 90 --VFDYEELRRKVHQVLYEPKYV 110
V EE+ + + ++ + V
Sbjct: 405 SDVVAAEEIEKGLKDLMDKDSIV 427
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 59.4 bits (142), Expect = 3e-12
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 35 AHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFADQKQNGQKAEEE-GYGLMVDFD---V 90
AHP F+TH G +S ES+ +P++ PL+A+QK N E+ L +
Sbjct: 349 AHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGL 408
Query: 91 FDYEELRRKVHQVLYEPK 108
EE+ R V ++ +
Sbjct: 409 VRREEVARVVKGLMEGEE 426
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 391
Score = 56.2 bits (134), Expect = 4e-11
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 5/79 (6%)
Query: 35 AHPKCRLFITHGGVHSAFESIYHAVPMVIVPLFAD----QKQNGQKAEEEGYGLMVDFDV 90
+ I H + ++ +P ++V D Q + + E G G+ VD V
Sbjct: 283 LFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPV 342
Query: 91 FDYEELRRKVHQVLYEPKY 109
+ L + L P+
Sbjct: 343 PTIDSLSAALDTAL-APEI 360
>d2exha1 b.29.1.23 (A:325-535) Beta-D-xylosidase C-terminal domain
{Geobacillus stearothermophilus [TaxId: 1422]}
Length = 211
Score = 25.4 bits (55), Expect = 1.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 80 EGYGLMVDFDVFDYEEL 96
G DFD F Y+EL
Sbjct: 195 SGQNNYADFDYFLYKEL 211
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 123
Score = 24.8 bits (54), Expect = 2.3
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
Query: 54 SIYHAVPMVIVPLFADQKQNGQKAEEEGYGLMVDFDV--FDYEELRRKVHQVL 104
+ + P VI+ Q+ +KA E G F + FD E L + QV
Sbjct: 71 AGFEHQPNVIMLTAFGQEDVTKKAVELG---ASYFILKPFDMENLAHHIRQVY 120
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium
carotovorum [TaxId: 554]}
Length = 204
Score = 24.9 bits (54), Expect = 2.6
Identities = 9/46 (19%), Positives = 15/46 (32%)
Query: 63 IVPLFADQKQNGQKAEEEGYGLMVDFDVFDYEELRRKVHQVLYEPK 108
LF +Q + QK E E + +++ L E
Sbjct: 31 NGYLFIEQNGHYQKCEMERGTAYLIGSLYNRTFLIGLAGVWEGEAY 76
>d1y7ba1 b.29.1.23 (A:325-534) Beta-D-xylosidase C-terminal domain
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 210
Score = 24.3 bits (52), Expect = 3.5
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 81 GYGLMVDFDVFDYEE 95
G DFD F Y+E
Sbjct: 196 GNNKPADFDYFCYKE 210
>d1yrza1 b.29.1.23 (A:1321-1525) Beta-D-xylosidase C-terminal domain
{Bacillus halodurans [TaxId: 86665]}
Length = 205
Score = 23.6 bits (50), Expect = 6.3
Identities = 7/16 (43%), Positives = 8/16 (50%)
Query: 80 EGYGLMVDFDVFDYEE 95
G DFD F Y+E
Sbjct: 190 SGTKKPADFDYFRYKE 205
>d1u09a_ e.8.1.4 (A:) Viral RNA polymerase {Foot-and-mouth disease
virus [TaxId: 12110]}
Length = 476
Score = 23.8 bits (51), Expect = 6.9
Identities = 12/71 (16%), Positives = 19/71 (26%), Gaps = 3/71 (4%)
Query: 42 FITHGGVHSAFESIYHAV--PMVIVP-LFADQKQNGQKAEEEGYGLMVDFDVFDYEELRR 98
F+ Y V + L ++ Q+ GL V +Y L
Sbjct: 385 FLKRHFHMDYGTGFYKPVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFE 444
Query: 99 KVHQVLYEPKY 109
+ P Y
Sbjct: 445 PFQGLFEIPSY 455
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.137 0.434
Gapped
Lambda K H
0.267 0.0389 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 451,272
Number of extensions: 18430
Number of successful extensions: 58
Number of sequences better than 10.0: 1
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 17
Length of query: 112
Length of database: 2,407,596
Length adjustment: 71
Effective length of query: 41
Effective length of database: 1,432,766
Effective search space: 58743406
Effective search space used: 58743406
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.8 bits)