BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy106
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55EH8|ABCGN_DICDI ABC transporter G family member 23 OS=Dictyostelium discoideum
GN=abcG23 PE=3 SV=2
Length = 701
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 139/239 (58%), Gaps = 12/239 (5%)
Query: 3 LKDKCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVL 62
+ D I + N + + + V++KL T+ K TI SL+G+SG GKTT+L I G+
Sbjct: 1 MGDNIVINLNNVSRSYGNV--KVIEKLNFTINKGTINSLIGSSGSGKTTILKTILGKLKQ 58
Query: 63 NGGNIHL---------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEK 113
+ G + + S +G+ PQ + LY E TI+E + ++ I+ M + +K
Sbjct: 59 DDGIVQVFGKEPCGKGSEIPGSSVGYAPQDVCLYNEITIEETLSFFASIHRMPKDEYIKK 118
Query: 114 AEYLQALLHLNHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWN 173
+ L +L L + LSGGQQRRVSLA L+H P+LLILDEPT G+ P+++ +IW
Sbjct: 119 RDSLVEILELPSLSKIISELSGGQQRRVSLATALIHSPKLLILDEPTVGVCPLVSSKIWE 178
Query: 174 HLLYLAES-GRTILITTHYIDEAKKSHMIGLMRKGILLEESPPKVLLEKYNMKSLEDVF 231
HL++L ++ G TI+ITTHY+ E + I L+R G +LE PP LL KY LEDV+
Sbjct: 179 HLIFLTKNFGVTIIITTHYLQECRSCDNIFLLRNGRILESGPPNYLLSKYECSLLEDVY 237
>sp|Q8T674|ABCGK_DICDI ABC transporter G family member 20 OS=Dictyostelium discoideum
GN=abcG20 PE=3 SV=1
Length = 730
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 146/253 (57%), Gaps = 11/253 (4%)
Query: 6 KCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGG 65
K AI ++N + + + V+D L + ++ TI L+GASG GKTT+L I G+ + + G
Sbjct: 12 KLAISLKNVCRGYGNT--KVIDNLNLQIKSGTINCLIGASGSGKTTILRTILGRLIPDSG 69
Query: 66 NI--------HLSITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYL 117
+ + GF PQ+ +LY + T+D + ++ ++ + + + K +
Sbjct: 70 EVLVFGKRPHDIGGVPGSICGFCPQEGALYYDLTLDHTLNFFSNVHQIPKDKFESKKNEI 129
Query: 118 QALLHLNHFK-RKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLL 176
LL L R G LSGGQ++RVSLA+ LLH P+LLILDEPT GID +A IW++L
Sbjct: 130 IKLLDLPQINSRSVGLLSGGQKKRVSLAVALLHSPKLLILDEPTVGIDMEVASNIWSYLR 189
Query: 177 YLAESGRTILITTHYIDEAKKSHMIGLMRKGILLEESPPKVLLEKYNMKSLEDVFLLLSS 236
LA SG TI+ITTHYI+EA S + L+R G +LE P L+E+Y ++LE+VFL L
Sbjct: 190 SLANSGVTIIITTHYINEAVGSDNVFLLRDGKILENGAPNYLIERYESQTLEEVFLKLCK 249
Query: 237 KQQHDRIEQRRKS 249
+ I +K+
Sbjct: 250 RDNAQSIVDSKKN 262
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 251 LWPIQAIQEHTRYLANFLPLTYPIDSFRSIVFRGFDIFHWQVYYGFLSSTGWIVGLTLVC 310
LWP+Q++ + N LP T+ ++ R I+ +G + + +V+ FL W++ L +
Sbjct: 651 LWPLQSLPNWFVWFPNILPATHAGNAMRDIMLKGVGLHYKEVWVAFLVVLSWLIFLIFIA 710
Query: 311 WILLRYKN 318
+ L K+
Sbjct: 711 VLALNEKD 718
>sp|P72335|NODI_RHIS3 Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
N33) GN=nodI PE=3 SV=1
Length = 304
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 129/230 (56%), Gaps = 18/230 (7%)
Query: 6 KCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGG 65
K AI + K KL V++ L TV + LLG +G GK+T+ + G V + G
Sbjct: 3 KVAIDLAGVKKSFGDKL--VVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAG 60
Query: 66 NIHL--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYL 117
I + S ++K +G +PQ +L EFT+ E + +G +GMS ++IKE +
Sbjct: 61 KITVLGEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKE---VI 117
Query: 118 QALLHLNHFKRKC----GSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWN 173
+LL + K G LSGG +RR++LA L++DP+LL++DEPT+G+DP IW
Sbjct: 118 PSLLEFARLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWE 177
Query: 174 HLLYLAESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEKY 222
L +L G+TI++TTH+++EA++ + ++ G L E P L+E++
Sbjct: 178 RLRFLLARGKTIILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHALIEEH 227
>sp|Q39GT7|NODI_BURS3 Nod factor export ATP-binding protein I OS=Burkholderia sp. (strain
383) GN=nodI PE=3 SV=2
Length = 304
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 123/222 (55%), Gaps = 12/222 (5%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH 68
I N KR KL V++ L TVQ Y LLG +G GKTT L + G + G I
Sbjct: 6 IDFRNVEKRFGDKL--VVNGLSFTVQAGECYGLLGPNGAGKTTTLKMLLGLTHPDAGTIS 63
Query: 69 L--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQAL 120
L + +++++G +PQ +L P+FT+ E + +G +GMS Q + L
Sbjct: 64 LCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGMSAQAAHALVKPLLEF 123
Query: 121 LHL-NHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L N K G LSGG +RR++LA L++DP++L+LDEPT+G+DP +W L L
Sbjct: 124 AKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLL 183
Query: 180 ESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLE 220
G+TILITTH+++EA++ + ++ +G + E P L+E
Sbjct: 184 ARGKTILITTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 225
>sp|Q1BWI2|NODI_BURCA Nod factor export ATP-binding protein I OS=Burkholderia cenocepacia
(strain AU 1054) GN=nodI PE=3 SV=1
Length = 304
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 12/222 (5%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH 68
I N KR+ KL V++ L +V+ Y LLG +G GKTT L + G + G I
Sbjct: 6 IDFRNVEKRYGDKL--VVNGLSFSVKVGECYGLLGPNGAGKTTTLKMLLGLAHPDAGTIS 63
Query: 69 L--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQAL 120
L + +++++G +PQ +L P+FT+ E + + +GMS Q + L
Sbjct: 64 LCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFSRYFGMSAQAARALVAPLLEF 123
Query: 121 LHL-NHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L N K G LSGG +RR++LA L++DP++L+LDEPT+G+DP +W L L
Sbjct: 124 AKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLL 183
Query: 180 ESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLE 220
G+TILITTH+++EA++ + ++ +G + E P L+E
Sbjct: 184 ARGKTILITTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 225
>sp|Q2SVP3|NODI_BURTA Nod factor export ATP-binding protein I OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=nodI PE=3 SV=2
Length = 304
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 125/222 (56%), Gaps = 12/222 (5%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH 68
I + KR+ KL V+D L VQ + LLG +G GKTT L + G + G+I
Sbjct: 6 IDFQQVEKRYDDKL--VVDGLSFHVQPGECFGLLGPNGAGKTTALKMLLGITHPDAGSIS 63
Query: 69 L--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQAL 120
L + +++++G +PQ +L P+FT+ E + + +G++ + + L
Sbjct: 64 LCGEPVPSRARHARRRVGVVPQFDNLDPDFTVRENLLVFARYFGLAAHEARALVPPLLEF 123
Query: 121 LHL-NHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L N K G LSGG +RR++LA L+++P++L+LDEPT+G+DP +W L L
Sbjct: 124 AKLENKADAKVGELSGGMKRRLTLARALVNNPDVLVLDEPTTGLDPQARHLMWERLRSLL 183
Query: 180 ESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLE 220
G+TIL+TTH+++EA++ H + ++ +G + E P+ L+E
Sbjct: 184 VRGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRTLIE 225
>sp|Q3JSQ0|NODI_BURP1 Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain 1710b) GN=nodI PE=3 SV=2
Length = 304
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 125/222 (56%), Gaps = 12/222 (5%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH 68
I + KR+ KL V+D L VQ + LLG +G GKTT L + G + G+I
Sbjct: 6 IDFQQVEKRYDDKL--VVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSIS 63
Query: 69 L--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQAL 120
L + +++++G +PQ +L P+FT+ E + + +G++ + L
Sbjct: 64 LCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEF 123
Query: 121 LHL-NHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L + K G LSGG +RR++LA L++DP++L+LDEPT+G+DP +W L L
Sbjct: 124 AKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLL 183
Query: 180 ESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLE 220
G+TIL+TTH+++EA++ H + ++ +G + E P++L+E
Sbjct: 184 ARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRMLIE 225
>sp|Q62K72|NODI_BURMA Nod factor export ATP-binding protein I OS=Burkholderia mallei
(strain ATCC 23344) GN=nodI PE=3 SV=2
Length = 304
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 125/222 (56%), Gaps = 12/222 (5%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH 68
I + KR+ KL V+D L VQ + LLG +G GKTT L + G + G+I
Sbjct: 6 IDFQQVEKRYDDKL--VVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSIS 63
Query: 69 L--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQAL 120
L + +++++G +PQ +L P+FT+ E + + +G++ + L
Sbjct: 64 LCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEF 123
Query: 121 LHL-NHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L + K G LSGG +RR++LA L++DP++L+LDEPT+G+DP +W L L
Sbjct: 124 AKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLL 183
Query: 180 ESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLE 220
G+TIL+TTH+++EA++ H + ++ +G + E P++L+E
Sbjct: 184 ARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRMLIE 225
>sp|Q63TX3|NODI_BURPS Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain K96243) GN=nodI PE=3 SV=2
Length = 304
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 125/222 (56%), Gaps = 12/222 (5%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH 68
I + KR+ KL V+D L VQ + LLG +G GKTT L + G + G+I
Sbjct: 6 IDFQQVEKRYDDKL--VVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSIS 63
Query: 69 L--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQAL 120
L + +++++G +PQ +L P+FT+ E + + +G++ + L
Sbjct: 64 LCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEF 123
Query: 121 LHL-NHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L + K G LSGG +RR++LA L++DP++L+LDEPT+G+DP +W L L
Sbjct: 124 AKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLL 183
Query: 180 ESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLE 220
G+TIL+TTH+++EA++ H + ++ +G + E P++L+E
Sbjct: 184 ARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRMLIE 225
>sp|P37624|YHIH_ECOLI Uncharacterized ABC transporter ATP-binding protein YhiH
OS=Escherichia coli (strain K12) GN=yhiH PE=3 SV=3
Length = 911
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 121/218 (55%), Gaps = 10/218 (4%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL--------SITSKKQ 76
+D + + + I+ LG++GCGK+T + +TG + G L I ++++
Sbjct: 291 AVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTRRR 350
Query: 77 LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHFKRKCG-SLSG 135
+G+M Q SLY E T+ + + + ++ + +I + + LN + SL
Sbjct: 351 VGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPL 410
Query: 136 GQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGR-TILITTHYIDE 194
G ++R+SLA+ ++H PE+LILDEPTSG+DPV + W ++ L+ + TI I+TH+++E
Sbjct: 411 GIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNE 470
Query: 195 AKKSHMIGLMRKGILLEESPPKVLLEKYNMKSLEDVFL 232
A++ I LM G +L P+ L+EK SLE+ F+
Sbjct: 471 AERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFI 508
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 145/292 (49%), Gaps = 21/292 (7%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL---SITSKK------ 75
L+ + + + + L+G G GK++LLS I+G V+ GN+ + + K
Sbjct: 27 ALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVC 86
Query: 76 -QLGFMPQQI--SLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHFK-RKCG 131
++ +MPQ + +LY ++ E + ++ ++G + + + L L F+ R G
Sbjct: 87 PRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAG 146
Query: 132 SLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHL--LYLAESGRTILITT 189
LSGG ++++ L L+HDPELLILDEPT+G+DP+ + W+ + + +S ++L+ T
Sbjct: 147 KLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSVLVAT 206
Query: 190 HYIDEAKKSHMIGLMRKGILLEESPPKVLLEKYNMKSLEDVFLLLSSKQQHDRIEQRRKS 249
Y++EA++ + M G +L + L ++ +LE+ F+ L + Q + +
Sbjct: 207 AYMEEAERFDWLVAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQR---QAHQAV 263
Query: 250 FLWPIQAIQEHTRYLANFLPLTYPIDSFRSIVFRGFDIFHWQVYYGFLSSTG 301
+ P Q E+ LT SF ++ F I ++ +GFL S G
Sbjct: 264 VIPPYQP--ENAEIAIEARDLTMRFGSFVAVDHVNFRIPRGEI-FGFLGSNG 312
>sp|Q8XXY9|NODI_RALSO Nod factor export ATP-binding protein I OS=Ralstonia solanacearum
(strain GMI1000) GN=nodI PE=3 SV=1
Length = 321
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 118/199 (59%), Gaps = 17/199 (8%)
Query: 11 VENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL- 69
VE KR+ + V+D L +V++ + LLG +G GKTT L + G + + G + L
Sbjct: 19 VEGLRKRYGEQ--TVVDGLSFSVRRGQCFGLLGPNGAGKTTTLRMLLGMTMPDAGTLQLC 76
Query: 70 -------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLH 122
+ ++ ++G +PQ +L P+FT+ E + +G +G+ I+++ + LL
Sbjct: 77 GETIPGHAHRARMRVGVVPQFDNLDPDFTVSENLQIFGRYFGLPAATIRKR---MPGLLE 133
Query: 123 LNHFKRKCGS----LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYL 178
++K + LSGG +RR+++A +L++DP++L++DEPT+G+DP IW L L
Sbjct: 134 FARLEQKADAPVRALSGGMRRRLTVARSLINDPDVLVMDEPTTGLDPQARHLIWERLRSL 193
Query: 179 AESGRTILITTHYIDEAKK 197
SG+TIL+TTH+++EA++
Sbjct: 194 LASGKTILLTTHFMEEAER 212
>sp|Q9FLT5|AB9A_ARATH ABC transporter A family member 9 OS=Arabidopsis thaliana GN=ABCA9
PE=3 SV=1
Length = 950
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 13/198 (6%)
Query: 24 YVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL---SITS------- 73
+ + L M + K ++ LLG +G GKTT +SC+TG N + GG+ + SI S
Sbjct: 547 HAVKGLWMNIAKDQLFCLLGPNGAGKTTTISCLTGINPVTGGDAKIYGNSIRSSVGMSNI 606
Query: 74 KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLN-HFKRKCGS 132
+K +G PQ L+ + +E + + I G+ IK AE L + L K + GS
Sbjct: 607 RKMIGVCPQFDILWDALSSEEHLHLFASIKGLPPSSIKSIAEKLLVDVKLTGSAKIRAGS 666
Query: 133 LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYI 192
SGG +RR+S+AI L+ DP+L+ LDEPT+G+DP+ +W+ ++ ++ GR I++TTH +
Sbjct: 667 YSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWD-IIQESKKGRAIILTTHSM 725
Query: 193 DEAKK-SHMIGLMRKGIL 209
+EA S IG+M KG L
Sbjct: 726 EEADILSDRIGIMAKGRL 743
>sp|Q9FKF2|AB11A_ARATH ABC transporter A family member 11 OS=Arabidopsis thaliana
GN=ABCA11 PE=3 SV=1
Length = 953
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 116/198 (58%), Gaps = 13/198 (6%)
Query: 24 YVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL---SITS------- 73
+ + L M + K ++ LLG +G GKTT +SC+TG N + GG+ + SI S
Sbjct: 546 HAVKGLWMNIAKDQLFCLLGPNGAGKTTTISCLTGINPVTGGDALIYGDSIRSSVGISNI 605
Query: 74 KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLN-HFKRKCGS 132
+K +G PQ L+ + ++ + + I G+ IK AE L A + L K + GS
Sbjct: 606 RKMIGVCPQFDILWDALSSEQHLHLFASIKGLPPASIKSTAEKLLADVKLTGAAKVRAGS 665
Query: 133 LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYI 192
SGG +RR+S+A+ L+ DP+L+ LDEPT+G+DP+ +W+ ++ ++ GR I++TTH +
Sbjct: 666 YSGGMKRRLSVAVALIGDPKLVFLDEPTTGMDPITRRHVWD-IIQESKKGRAIILTTHSM 724
Query: 193 DEAKK-SHMIGLMRKGIL 209
+EA S IG+M KG L
Sbjct: 725 EEADILSDRIGIMAKGRL 742
>sp|P94440|YFIL_BACSU Uncharacterized ABC transporter ATP-binding protein YfiL
OS=Bacillus subtilis (strain 168) GN=yfiL PE=3 SV=2
Length = 311
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 116/197 (58%), Gaps = 11/197 (5%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH 68
++ EN K + K ++ + +++K + LLG +G GK+T +S I+G + GNI
Sbjct: 2 LQAENIKKAYGKK--TIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNIT 59
Query: 69 L--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKA-EYLQA 119
+ + +K+++G +PQ+I+LYP T E + ++G +YG++ + K++A E L+
Sbjct: 60 VGGYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHGEAKKRAAEVLEY 119
Query: 120 LLHLNHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
+ K K + SGG +RR+++ L+H PELLI+DEPT GIDP I + L
Sbjct: 120 VGLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLN 179
Query: 180 ESGRTILITTHYIDEAK 196
E+G T++ T+HY++E +
Sbjct: 180 ETGMTVIYTSHYMEEVE 196
>sp|P0A9U2|YBHF_SHIFL Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Shigella flexneri GN=ybhF PE=3 SV=1
Length = 578
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 9/201 (4%)
Query: 27 DKLCMTVQKSTIYSLLGASGCGKTT-------LLSCITGQNVLNGGNIHLSITSKKQ-LG 78
D + V++ I+ LLG +G GK+T LL +GQ ++ G ++ S +Q LG
Sbjct: 346 DHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQHLG 405
Query: 79 FMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHF-KRKCGSLSGGQ 137
+M Q+ SLY T+++ + ++ +YG+ + EK + L L G
Sbjct: 406 YMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGF 465
Query: 138 QRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYIDEAKK 197
++R++LA +L+H+P++L LDEPTSG+DP+ E W H+ + E G T+++TTH++DEA+
Sbjct: 466 KQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEAEY 525
Query: 198 SHMIGLMRKGILLEESPPKVL 218
IGL+ +G L+ P L
Sbjct: 526 CDRIGLVYRGKLIASGTPDDL 546
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 25/257 (9%)
Query: 5 DKCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITG------ 58
+ I + KR + L T+ + L+G G GKTTL+ + G
Sbjct: 2 NDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDS 61
Query: 59 --------QNVLNGGNIHLSITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQI 110
+ N G +H LG+MPQ+ LY + T+ E + Y + ++ +
Sbjct: 62 GSATVIGFDPIKNDGALHAV------LGYMPQKFGLYEDLTVMENLNLYADLRSVTGEAR 115
Query: 111 KEKAEYLQALLHLNHFK-RKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAE 169
K+ L L F R G LSGG ++++ LA TL+ +P++L+LDEP G+DP+
Sbjct: 116 KQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRR 175
Query: 170 EIWNHLLYLAESGRTILITTHYIDEAKKSHMIGLMRKGILLEESPPKVLLEKYNMKSLED 229
E+W + LA G IL +T Y+DEA++ + LM +G LL + PK L + +S
Sbjct: 176 ELWQMVHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRS--- 232
Query: 230 VFLLLSSKQQHDRIEQR 246
FL+ S + + ++ QR
Sbjct: 233 -FLMTSPHEGNRKLLQR 248
>sp|P0A9U1|YBHF_ECOLI Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Escherichia coli (strain K12) GN=ybhF PE=1 SV=1
Length = 578
Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 9/201 (4%)
Query: 27 DKLCMTVQKSTIYSLLGASGCGKTT-------LLSCITGQNVLNGGNIHLSITSKKQ-LG 78
D + V++ I+ LLG +G GK+T LL +GQ ++ G ++ S +Q LG
Sbjct: 346 DHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQHLG 405
Query: 79 FMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHF-KRKCGSLSGGQ 137
+M Q+ SLY T+++ + ++ +YG+ + EK + L L G
Sbjct: 406 YMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGF 465
Query: 138 QRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYIDEAKK 197
++R++LA +L+H+P++L LDEPTSG+DP+ E W H+ + E G T+++TTH++DEA+
Sbjct: 466 KQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEAEY 525
Query: 198 SHMIGLMRKGILLEESPPKVL 218
IGL+ +G L+ P L
Sbjct: 526 CDRIGLVYRGKLIASGTPDDL 546
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 25/257 (9%)
Query: 5 DKCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITG------ 58
+ I + KR + L T+ + L+G G GKTTL+ + G
Sbjct: 2 NDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDS 61
Query: 59 --------QNVLNGGNIHLSITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQI 110
+ N G +H LG+MPQ+ LY + T+ E + Y + ++ +
Sbjct: 62 GSATVIGFDPIKNDGALHAV------LGYMPQKFGLYEDLTVMENLNLYADLRSVTGEAR 115
Query: 111 KEKAEYLQALLHLNHFK-RKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAE 169
K+ L L F R G LSGG ++++ LA TL+ +P++L+LDEP G+DP+
Sbjct: 116 KQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRR 175
Query: 170 EIWNHLLYLAESGRTILITTHYIDEAKKSHMIGLMRKGILLEESPPKVLLEKYNMKSLED 229
E+W + LA G IL +T Y+DEA++ + LM +G LL + PK L + +S
Sbjct: 176 ELWQMVHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRS--- 232
Query: 230 VFLLLSSKQQHDRIEQR 246
FL+ S + + ++ QR
Sbjct: 233 -FLMTSPHEGNRKLLQR 248
>sp|Q1LKJ2|NODI_RALME Nod factor export ATP-binding protein I OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=nodI PE=3 SV=1
Length = 303
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 106/182 (58%), Gaps = 9/182 (4%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL--------SITSKKQ 76
V+D L + VQ + LLG +G GKTT L + G G + L + ++ +
Sbjct: 19 VVDNLDLEVQPGQCFGLLGPNGAGKTTTLRMLLGLTTPASGTLMLCGEPIPQRAPQARMR 78
Query: 77 LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHL-NHFKRKCGSLSG 135
+G +PQ +L P+F++ E + +G +G+S QI E+ L L + + LSG
Sbjct: 79 VGVVPQFDNLDPDFSVIENLRIFGRYFGLSSAQIAERVPKLLEFARLESRADAQVRDLSG 138
Query: 136 GQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYIDEA 195
G +RR+++A L++DP+LLI+DEPT+G+DP IW L L +G+TIL+TTH+++EA
Sbjct: 139 GMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLLSAGKTILLTTHFMEEA 198
Query: 196 KK 197
++
Sbjct: 199 ER 200
>sp|P23703|NODI_RHILO Nod factor export ATP-binding protein I OS=Rhizobium loti (strain
MAFF303099) GN=nodI PE=3 SV=2
Length = 340
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 129/234 (55%), Gaps = 18/234 (7%)
Query: 2 DLKDKCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNV 61
D A+ K + +K+ V+D+L +V + LLG +G GK+T+ + G
Sbjct: 35 DSASTVAVDFAGVTKSYGNKI--VVDELSFSVASGECFGLLGPNGAGKSTIARMLLGMTC 92
Query: 62 LNGGNIHL--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEK 113
+ G I + + +++ +G +PQ +L EFT+ E + +G +GMS +Q +
Sbjct: 93 PDAGTITVLGVPVPARARLARRGIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRQSEA- 151
Query: 114 AEYLQALLHLNHFKRKCGS----LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAE 169
+ +LL +RK + LSGG +R +++A L++DP+L+++DEPT+G+DP
Sbjct: 152 --VIPSLLEFARLERKADARVSELSGGMKRCLTMARALINDPQLIVMDEPTTGLDPHARH 209
Query: 170 EIWNHLLYLAESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEKY 222
IW L L G+TI++TTH+++EA++ + ++ KG + E P+ L++++
Sbjct: 210 LIWERLRALLARGKTIILTTHFMEEAERLCDRLCVLEKGRNIAEGGPQALIDEH 263
>sp|Q13ZJ1|NODI_BURXL Nod factor export ATP-binding protein I OS=Burkholderia xenovorans
(strain LB400) GN=nodI PE=3 SV=1
Length = 304
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 120/224 (53%), Gaps = 12/224 (5%)
Query: 6 KCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGG 65
+ AI + K + K V+D L V + LLG +G GKTT L + G + G
Sbjct: 3 EAAIEFDKVKKSYGEK--TVVDGLSFHVAPGECFGLLGPNGAGKTTTLRMLLGIAAPDAG 60
Query: 66 NIHL--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYL 117
I L + ++ ++G +PQ +L P+FT+ E + +G +GMS Q + L
Sbjct: 61 TIRLCGEPIPRRARVARARVGVVPQFDNLDPDFTVRENLLVFGRYFGMSAAQCRAMVPPL 120
Query: 118 QALLHL-NHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLL 176
L + + LSGG +RR++LA L++DP++LI+DEPT+G+DP IW L
Sbjct: 121 LEFARLESKADARVSELSGGMKRRLTLARALVNDPDVLIMDEPTTGLDPQARHLIWERLR 180
Query: 177 YLAESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLL 219
L G+TIL+TTH+++EA++ H + ++ +G + E P L+
Sbjct: 181 SLLARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPSALI 224
>sp|Q8KLG1|NODI_RHIEC Nod factor export ATP-binding protein I OS=Rhizobium etli (strain
CFN 42 / ATCC 51251) GN=nodI PE=3 SV=3
Length = 316
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 111/202 (54%), Gaps = 17/202 (8%)
Query: 8 AIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNI 67
AI + K + K V+ L V + LLG +G GK+T+ I G + G I
Sbjct: 17 AIDFSDVSKTYGDK--AVVSALSFRVSPGECFGLLGPNGAGKSTIARMILGMTAPDAGKI 74
Query: 68 HL--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQA 119
+ + ++K +G +PQ +L PEFT+ E + Y +GM+ ++++ + +
Sbjct: 75 TVLGVPVPAQARLARKGIGVVPQFDNLEPEFTVRENLLVYSRYFGMNTRKVEA---VMSS 131
Query: 120 LLHLNHFKRKCGS----LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHL 175
LL + K + LSGG +RR++LA L++DP+LL++DEPT+G+DP IW L
Sbjct: 132 LLEFARLESKVNARVSELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERL 191
Query: 176 LYLAESGRTILITTHYIDEAKK 197
L G+TI++TTH+++EA++
Sbjct: 192 RSLLTRGKTIILTTHFMEEAER 213
>sp|P50332|NODI_RHIGA Nod factor export ATP-binding protein I OS=Rhizobium galegae
GN=nodI PE=3 SV=1
Length = 347
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 16/209 (7%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH---LSITSKKQL---- 77
V+D L V+ + LLG +G GK+T+ + G + G I L + K +L
Sbjct: 63 VVDSLSFGVRAGECFGLLGPNGAGKSTITRMLLGMATPSAGKISVLGLPVPGKARLARAS 122
Query: 78 -GFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHFKRKC----GS 132
G + Q +L EFT+ E + +G + MS + I++ + +LL + K
Sbjct: 123 IGVVSQFDNLDMEFTVRENLLVFGRYFQMSTRAIEK---LIPSLLEFAQLEAKADVRVSD 179
Query: 133 LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYI 192
LSGG +RR++LA L++DP+LLILDEPT+G+DP +IW L L G+TIL+TTH +
Sbjct: 180 LSGGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLIRGKTILLTTHMM 239
Query: 193 DEAKK-SHMIGLMRKGILLEESPPKVLLE 220
DEA++ + ++ G ++ E PP L+E
Sbjct: 240 DEAERMCDRLCVLEGGRMIAEGPPLSLIE 268
>sp|P26050|NODI_BRAJA Nod factor export ATP-binding protein I OS=Bradyrhizobium japonicum
(strain USDA 110) GN=nodI PE=3 SV=2
Length = 306
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 118/211 (55%), Gaps = 16/211 (7%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL--------SITSKKQ 76
+++ L +V + + LLG +G GK+T+ + G + G I + + ++ +
Sbjct: 22 IVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLDEPVPSRARAARVR 81
Query: 77 LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHFKRKCGS---- 132
+G +PQ +L PEFT+ E + +G +GMS + I+ + +LL + K
Sbjct: 82 VGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEA---VVPSLLEFARLESKADVRVSL 138
Query: 133 LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYI 192
LSGG +RR++LA L++DP LL++DEPT+G+DP IW L L G+TIL+TTH++
Sbjct: 139 LSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARGKTILLTTHFM 198
Query: 193 DEAKK-SHMIGLMRKGILLEESPPKVLLEKY 222
+EA++ + ++ G + E P L++++
Sbjct: 199 EEAERLCDRLCVLESGCKIAEGKPDALIDEH 229
>sp|Q8GNH6|NODI_RHIML Nod factor export ATP-binding protein I OS=Rhizobium meliloti
GN=nodI PE=3 SV=1
Length = 335
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 120/224 (53%), Gaps = 12/224 (5%)
Query: 8 AIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNI 67
AI + + K + K V+D L TV + LLG +G GK+T+ I G G I
Sbjct: 36 AIDLASVTKSYGDK--PVVDGLSFTVAAGECFGLLGPNGAGKSTITRMILGMTTPATGVI 93
Query: 68 ---HLSITSKKQL-----GFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQA 119
+ + S+ +L G +PQ +L EFT+ E + +G + MS ++I+ L
Sbjct: 94 TVLGVPVPSRARLARMGIGVVPQFDNLDSEFTVRENLLVFGRYFRMSTREIEAVIPSLLE 153
Query: 120 LLHL-NHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYL 178
L N + LSGG +RR++LA L++DP+LLILDEPT+G+DP IW L L
Sbjct: 154 FARLENKVDARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSL 213
Query: 179 AESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEK 221
G+TIL+TTH ++EA++ + ++ G + E P VL+++
Sbjct: 214 LARGKTILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHVLIDE 257
>sp|P55476|NODI_RHISN Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
NGR234) GN=nodI PE=3 SV=1
Length = 343
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 122/231 (52%), Gaps = 18/231 (7%)
Query: 4 KDKCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLN 63
K AI + N K + K+ V+D+L T+ + LLG +G GK+T+ + G +
Sbjct: 40 KSDVAIELTNVSKSYGDKV--VVDQLSFTITSGECFGLLGPNGAGKSTVSRLVLGLAPPD 97
Query: 64 GGNIHL--------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAE 115
G I + + ++ ++G +PQ +L EFT E + +G +G+ +E E
Sbjct: 98 EGTITVLGEPVPARARLARSRIGVVPQFDTLDREFTARENLLVFGRYFGL---HTRELEE 154
Query: 116 YLQALLHLNHFKRKC----GSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEI 171
+ LL + K LSGG QRR++LA L++DP+LLILDEPT+G+DP I
Sbjct: 155 AIPPLLDFARLESKADVPVAQLSGGMQRRLTLACALINDPQLLILDEPTTGLDPHARHLI 214
Query: 172 WNHLLYLAESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEK 221
W L L G+TIL+TTH+++EA + + ++ G + E P L+++
Sbjct: 215 WERLRSLLALGKTILLTTHFMEEADRLCDRLCVIEHGRKIVEGRPHALIDE 265
>sp|O52618|NODI_RHIME Nod factor export ATP-binding protein I OS=Rhizobium meliloti
(strain 1021) GN=nodI PE=3 SV=3
Length = 335
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 121/228 (53%), Gaps = 12/228 (5%)
Query: 4 KDKCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLN 63
K AI V + K + K V++ L TV + LLG +G GK+T+ I G
Sbjct: 32 KPTVAIDVASVTKSYGDK--PVINGLSFTVAAGECFGLLGPNGAGKSTITRMILGMTTPG 89
Query: 64 GGNI---HLSITSKKQL-----GFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAE 115
G I + + S+ +L G +PQ +L EFT+ E + +G + MS ++I+
Sbjct: 90 TGEITVLGVPVPSRARLARMRIGVVPQFDNLDLEFTVRENLLVFGRYFRMSTREIEAVIP 149
Query: 116 YLQALLHL-NHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNH 174
L L N + LSGG +RR++LA L++DP+LLILDEPT+G+DP IW
Sbjct: 150 SLLEFARLENKADARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWER 209
Query: 175 LLYLAESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEK 221
L L G+TIL+TTH ++EA++ + ++ G + E P +L+++
Sbjct: 210 LRSLLARGKTILLTTHIMEEAERLCDRLCVLEAGHKIAEGRPHMLIDE 257
>sp|P36879|YADG_ECOLI Uncharacterized ABC transporter ATP-binding protein YadG
OS=Escherichia coli (strain K12) GN=yadG PE=3 SV=1
Length = 308
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 115/207 (55%), Gaps = 10/207 (4%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL--------SITSKKQ 76
L + + V+ Y+LLG +G GK+T + I+ G + + + +K+Q
Sbjct: 20 ALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQ 79
Query: 77 LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAE-YLQALLHLNHFKRKCGSLSG 135
LG +PQ+ + P T+ +++ YG+ ++ ++E YL+ L + LSG
Sbjct: 80 LGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSG 139
Query: 136 GQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYIDEA 195
G +RR+ +A L+H+P+LLILDEPT+G+D + +W L L + G TI++TTHY++EA
Sbjct: 140 GMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEA 199
Query: 196 KK-SHMIGLMRKGILLEESPPKVLLEK 221
+ IG+++ G L+E + K LL K
Sbjct: 200 EMLCRNIGIIQHGELVENTSMKALLAK 226
>sp|Q9Z3I3|NODI_BRASS Nod factor export ATP-binding protein I OS=Bradyrhizobium sp.
(strain SNU001) GN=nodI PE=3 SV=1
Length = 305
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 15/210 (7%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL-------SITSKKQL 77
+++ L +V + + LLG +G GK+T+ + G + G I + +++ +
Sbjct: 22 IVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMIWPDRGKITVLDEPVPSRARARRGV 81
Query: 78 GFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHFKRKCGS----L 133
G +PQ +L PEFT+ E + +G +GMS + I+ + +LL + K L
Sbjct: 82 GVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEA---VVPSLLEFARLESKADVRVSLL 138
Query: 134 SGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYID 193
GG +RR++LA L++DP LL++DEPT+G+DP IW L L G+TIL+TTH+++
Sbjct: 139 GGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARGKTILLTTHFME 198
Query: 194 EAKK-SHMIGLMRKGILLEESPPKVLLEKY 222
EA++ + ++ G + E P L++++
Sbjct: 199 EAERLCDPLCVLESGCKIAEGEPDALIDEH 228
>sp|Q84K47|AB2A_ARATH ABC transporter A family member 2 OS=Arabidopsis thaliana GN=ABCA2
PE=2 SV=1
Length = 983
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 13/198 (6%)
Query: 24 YVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL---SITS------- 73
+ L L M + K ++ LLG +G GKTT ++C+TG + GG+ + SI S
Sbjct: 545 HALKGLWMNIAKDQLFCLLGPNGAGKTTTINCLTGLFPVTGGDALIYGNSIRSSVGMSNI 604
Query: 74 KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHF-KRKCGS 132
+K +G PQ L+ + +E + + I G+ I E A + L K + GS
Sbjct: 605 RKMIGVCPQFDILWDALSGEEHLKLFASIKGLPPSSINSMVEKSLAEVKLTEAGKIRAGS 664
Query: 133 LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYI 192
SGG +RR+S+A++L+ DP+L+ LDEPT+G+DP+ +W+ ++ + GR I++TTH +
Sbjct: 665 YSGGMKRRLSVAVSLIGDPKLVFLDEPTTGMDPITRRHVWD-IIQETKKGRAIILTTHSM 723
Query: 193 DEAKK-SHMIGLMRKGIL 209
+EA S IG+M KG L
Sbjct: 724 EEADILSDRIGIMAKGRL 741
>sp|O95477|ABCA1_HUMAN ATP-binding cassette sub-family A member 1 OS=Homo sapiens GN=ABCA1
PE=1 SV=3
Length = 2261
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 KCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITG------- 58
K + ++N K + + +D L + + I S LG +G GKTT +S +TG
Sbjct: 896 KLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG 955
Query: 59 QNVLNGGNIHLSITSKKQ-LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAE-- 115
+ G +I +++ +Q LG PQ L+ T++E I +Y + G+S + +K + E
Sbjct: 956 TAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQM 1015
Query: 116 YLQALLHLNHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHL 175
L L + K K LSGG QR++S+A+ + +++ILDEPT+G+DP IW L
Sbjct: 1016 ALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELL 1075
Query: 176 LYLAESGRTILITTHYIDEA 195
L + GRTI+++TH++DEA
Sbjct: 1076 LKYRQ-GRTIILSTHHMDEA 1094
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 105/197 (53%), Gaps = 9/197 (4%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH 68
+ ++ K + K +D++C+ + + LLG +G GK++ +TG + G+
Sbjct: 1912 LEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAF 1971
Query: 69 LSITS--------KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQAL 120
L+ S + +G+ PQ ++ T E + ++ L+ G+ +++ + E+
Sbjct: 1972 LNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRK 2031
Query: 121 LHLNHFKRK-CGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L L + K G+ SGG +R++S A+ L+ P ++ LDEPT+G+DP +WN L +
Sbjct: 2032 LGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVV 2091
Query: 180 ESGRTILITTHYIDEAK 196
+ GR++++T+H ++E +
Sbjct: 2092 KEGRSVVLTSHSMEECE 2108
>sp|P78363|ABCA4_HUMAN Retinal-specific ATP-binding cassette transporter OS=Homo sapiens
GN=ABCA4 PE=1 SV=3
Length = 2273
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 10/180 (5%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITG------QNVLNGG-NIHLSITSKKQ- 76
+D+L +T ++ I + LG +G GKTT LS +TG VL GG +I S+ + +Q
Sbjct: 945 AVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGRDIETSLDAVRQS 1004
Query: 77 LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHFK-RKCGSLSG 135
LG PQ L+ T+ E + +Y + G S ++ + + E + L+H + + LSG
Sbjct: 1005 LGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTGLHHKRNEEAQDLSG 1064
Query: 136 GQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYIDEA 195
G QR++S+AI + D +++ILDEPTSG+DP IW+ LL SGRTI+++TH++DEA
Sbjct: 1065 GMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWD-LLLKYRSGRTIIMSTHHMDEA 1123
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHLSITS--------KKQ 76
+D+LC+ V+ + LLG +G GKTT +TG + G+ ++ S +
Sbjct: 1954 AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQN 2013
Query: 77 LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHFKRKC--GSLS 134
+G+ PQ ++ T E + Y + G+ ++I++ A + L L + C G+ S
Sbjct: 2014 MGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYA-DCLAGTYS 2072
Query: 135 GGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYIDE 194
GG +R++S AI L+ P L++LDEPT+G+DP +WN ++ + GR +++T+H ++E
Sbjct: 2073 GGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGRAVVLTSHSMEE 2132
Query: 195 AKK-SHMIGLMRKG 207
+ + +M KG
Sbjct: 2133 CEALCTRLAIMVKG 2146
>sp|P41233|ABCA1_MOUSE ATP-binding cassette sub-family A member 1 OS=Mus musculus GN=Abca1
PE=1 SV=4
Length = 2261
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 110/200 (55%), Gaps = 11/200 (5%)
Query: 6 KCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITG------- 58
+ + ++N K + + +D L + + I S LG +G GKTT +S +TG
Sbjct: 896 RLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG 955
Query: 59 QNVLNGGNIHLSITSKKQ-LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAE-- 115
+ G +I ++S +Q LG PQ L+ T++E I +Y + G+S + +K + E
Sbjct: 956 TAYILGKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQM 1015
Query: 116 YLQALLHLNHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHL 175
L L + K K LSGG QR++S+A+ + +++ILDEPT+G+DP IW L
Sbjct: 1016 ALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELL 1075
Query: 176 LYLAESGRTILITTHYIDEA 195
L + GRTI+++TH++DEA
Sbjct: 1076 LKYRQ-GRTIILSTHHMDEA 1094
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 104/197 (52%), Gaps = 9/197 (4%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH 68
+ ++ K + K +D++C+ + + LLG +G GK+T +TG + G+
Sbjct: 1912 LEIKELTKIYRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLTGDTPVTRGDAF 1971
Query: 69 LSITS--------KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQAL 120
L+ S + +G+ PQ ++ T E + ++ L+ G+ +++ + E+
Sbjct: 1972 LNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRK 2031
Query: 121 LHLNHFKRKCGS-LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L L + K S SGG +R++S A+ L+ P ++ LDEPT+G+DP +WN L +
Sbjct: 2032 LGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIV 2091
Query: 180 ESGRTILITTHYIDEAK 196
+ GR++++T+H ++E +
Sbjct: 2092 KEGRSVVLTSHSMEECE 2108
>sp|O35600|ABCA4_MOUSE Retinal-specific ATP-binding cassette transporter OS=Mus musculus
GN=Abca4 PE=2 SV=1
Length = 2310
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 112/197 (56%), Gaps = 10/197 (5%)
Query: 8 AIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITG------QNV 61
+ V+N K +D+L +T ++ I + LG +G GKTT LS +TG V
Sbjct: 928 GVCVKNLVKVFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTV 987
Query: 62 LNGG-NIHLSITSKKQ-LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQA 119
L GG +I ++ +Q LG PQ L+ T+ E I +Y + G S ++ + + E +
Sbjct: 988 LIGGKDIETNLDVVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLE 1047
Query: 120 LLHLNHFK-RKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYL 178
L+H + + LSGG QR++S+AI + D ++++LDEPTSG+DP IW+ LL
Sbjct: 1048 DTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWD-LLLK 1106
Query: 179 AESGRTILITTHYIDEA 195
SGRTI+++TH++DEA
Sbjct: 1107 YRSGRTIIMSTHHMDEA 1123
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 112/211 (53%), Gaps = 10/211 (4%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGN-- 66
+++ K +S +D+LC+ V+ + LLG +G GKTT +TG + G+
Sbjct: 1937 LKLNELTKVYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDAT 1996
Query: 67 -----IHLSITSKKQ-LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEY-LQA 119
I SI+ Q +G+ PQ ++ T E + Y + G+ ++I++ A + +Q+
Sbjct: 1997 VAGKSILTSISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQS 2056
Query: 120 LLHLNHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L + R G+ SGG +R++S AI L P LL+LDEPT+G+DP +WN ++ +
Sbjct: 2057 LGLSLYADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVSII 2116
Query: 180 ESGRTILITTHYIDEAKK-SHMIGLMRKGIL 209
GR +++T+H ++E + + +M KG
Sbjct: 2117 REGRAVVLTSHSMEECEALCTRLAIMVKGTF 2147
>sp|Q1M7W6|NODI_RHIL3 Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=nodI PE=3 SV=2
Length = 311
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 121/227 (53%), Gaps = 18/227 (7%)
Query: 8 AIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNI 67
AI + K + K+ V++ L T+ + LLG +G GK+T+ I G + G I
Sbjct: 12 AIDLAGVSKSYGGKI--VVNDLSFTIAAGECFGLLGPNGAGKSTITRMILGMTSPSVGKI 69
Query: 68 HLSIT--------SKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQA 119
+ ++ ++G + Q +L EFT+ E + YG + MS ++I+ + +
Sbjct: 70 TVLGAQEPGQVRLARAKIGIVSQFDNLDLEFTVRENLLVYGRYFRMSTREIET---VIPS 126
Query: 120 LLHLNHFKRKCGS----LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHL 175
LL + K + LSGG +RR++LA L++DP+LLILDEPT+G+DP IW L
Sbjct: 127 LLEFARLESKANTRVADLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERL 186
Query: 176 LYLAESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEK 221
L G+TIL+TTH ++EA++ + ++ G + E P L+E+
Sbjct: 187 RSLLARGKTILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHALIEE 233
>sp|P08720|NODI_RHILV Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum
bv. viciae GN=nodI PE=3 SV=1
Length = 311
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 121/227 (53%), Gaps = 18/227 (7%)
Query: 8 AIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNI 67
AI + K + K+ V++ L T+ + LLG +G GK+T+ I G + G I
Sbjct: 12 AIDLAGVSKSYGGKI--VVNDLSFTIAAGECFGLLGPNGAGKSTITRMILGMTSPSVGKI 69
Query: 68 HLSIT--------SKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQA 119
+ ++ ++G + Q +L EFT+ E + YG + MS ++I+ + +
Sbjct: 70 TVLGAQEPGQVRLARAKIGIVSQFDNLDLEFTVRENLLVYGRYFRMSTREIET---VIPS 126
Query: 120 LLHLNHFKRKCGS----LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHL 175
LL + K + LSGG +RR++LA L++DP+LLILDEPT+G+DP IW L
Sbjct: 127 LLEFARLESKANTRVADLSGGMKRRLTLAGALINDPQLLILDEPTTGLDPHARHLIWERL 186
Query: 176 LYLAESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEK 221
L G+TIL+TTH ++EA++ + ++ G + E P L+E+
Sbjct: 187 RSLLARGKTILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHALIEE 233
>sp|Q9BZC7|ABCA2_HUMAN ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2
PE=1 SV=3
Length = 2435
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 12/204 (5%)
Query: 5 DKCAIRVENAYKRHSS-KLPYVL--DKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNV 61
D +++EN K + S K+ +L D+LC+ V+ + LLG +G GKT+ +TG
Sbjct: 2046 DNDMVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDES 2105
Query: 62 LNGGNIHLS--------ITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEK 113
GG ++ + ++ LG+ PQ +L+ E T E + Y + G+S +
Sbjct: 2106 TTGGEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARV 2165
Query: 114 AEYLQALLHLNHFKRK-CGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIW 172
++ L L + K G+ SGG +R++S AI L+ P + LDEPT+G+DP +W
Sbjct: 2166 VKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLW 2225
Query: 173 NHLLYLAESGRTILITTHYIDEAK 196
N +L L ++GR++++T+H ++E +
Sbjct: 2226 NLILDLIKTGRSVVLTSHSMEECE 2249
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 111/198 (56%), Gaps = 13/198 (6%)
Query: 7 CAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITG-------Q 59
C ++ YK KL L+KL + + ++ + S LG +G GKTT +S +TG
Sbjct: 991 CVDKLTKVYK-DDKKL--ALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGS 1047
Query: 60 NVLNGGNIHLSITS-KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQ 118
+ G +I + +K LG PQ L+ T++E + +Y + M+ ++I+ + + +
Sbjct: 1048 ATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMI 1107
Query: 119 ALLHLNHFKRK-CGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLY 177
L L++ + +LSGG +R++S+AI + +ILDEPT+G+DP IW+ +L
Sbjct: 1108 EDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILK 1167
Query: 178 LAESGRTILITTHYIDEA 195
+ GRTIL++TH++DEA
Sbjct: 1168 Y-KPGRTILLSTHHMDEA 1184
>sp|Q46YX6|NODI_CUPPJ Nod factor export ATP-binding protein I OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=nodI PE=3
SV=1
Length = 325
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL--------SITSKKQ 76
V++ L + V + + LLG +G GKTT L + G GG++ L + ++ +
Sbjct: 41 VVNDLDLQVHRGQCFGLLGPNGAGKTTTLRLLLGLTTPAGGSLTLCGEPIPERAPQARMR 100
Query: 77 LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHL-NHFKRKCGSLSG 135
+G +PQ +L P+F++ E + +G +G+S I+ + L L N + LSG
Sbjct: 101 VGVVPQFDNLDPDFSVIENLRIFGRYFGLSSAVIERRVPALLEFARLENRANAQVRDLSG 160
Query: 136 GQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYIDEA 195
G +RR+++A L++DP+LLI+DEPT+G+DP IW L L SG+TIL+TTH+++EA
Sbjct: 161 GMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLMASGKTILLTTHFMEEA 220
Query: 196 KK 197
++
Sbjct: 221 ER 222
>sp|Q3KBH4|POTA_PSEPF Spermidine/putrescine import ATP-binding protein PotA
OS=Pseudomonas fluorescens (strain Pf0-1) GN=potA PE=3
SV=1
Length = 361
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 121/226 (53%), Gaps = 12/226 (5%)
Query: 8 AIRVENAYKRHSSK--LPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGG 65
AI V N KR+S L LD + + + + ++LLG SGCGKTTLL I G ++ G
Sbjct: 6 AIEVRNVSKRYSDDPGLAPALDNVSVNIADNEFFTLLGPSGCGKTTLLRAIAGFEHVSDG 65
Query: 66 NIHLSITS-------KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQ 118
I L+ + K+++ + Q +L+P ++ + I + + G+ + I + + +
Sbjct: 66 EIRLAGETVNHLPPFKRRVNTVFQSYALFPHMSVAQNIAFGLEMQGLDRKTIPGRVDEML 125
Query: 119 ALLHLNHFK-RKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLY 177
AL+ + H RK LSGGQQ+RV+LA L P++L+LDEP S +D + +E+ L
Sbjct: 126 ALVQMEHLAGRKPAQLSGGQQQRVALARALAPKPKVLLLDEPLSALDLKLRKEMQVELKR 185
Query: 178 L-AESGRTILITTHYIDEA-KKSHMIGLMRKGILLEESPPKVLLEK 221
+ E+G T + TH +EA S I +M G +L+ P + E+
Sbjct: 186 VQQEAGITFIFVTHDQEEALTLSDRIAVMSAGKILQIGTPIDIYER 231
>sp|Q2YAD6|POTA_NITMU Spermidine/putrescine import ATP-binding protein PotA
OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849) GN=potA PE=3 SV=1
Length = 363
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 14/195 (7%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHLSITSKKQLGFMP--- 81
+D + + V+ ++LLG SGCGKTTLL I G ++ + G I L K +G P
Sbjct: 18 AVDNVSIDVEAGEFFTLLGPSGCGKTTLLRMIAGFDLPDSGQILLD--GKDMVGIPPEKR 75
Query: 82 ------QQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHF-KRKCGSLS 134
Q +L+P T+ + I + + G + Q+IK++ L +HL +F R LS
Sbjct: 76 PVHTVFQTYALFPHMTVADNIAFPLKMAGKAPQEIKKRVNELLERVHLPNFGNRFPHELS 135
Query: 135 GGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYL-AESGRTILITTHYID 193
GGQ++RV+ A L++ P LL+LDEP +D + EE+ L+ L E G T + TH D
Sbjct: 136 GGQKQRVAFARGLVNRPRLLLLDEPLGALDAKLREEMQIELINLQKEIGITFIFVTHAQD 195
Query: 194 EA-KKSHMIGLMRKG 207
EA SH I +M +G
Sbjct: 196 EALALSHRIAVMNRG 210
>sp|P41234|ABCA2_MOUSE ATP-binding cassette sub-family A member 2 OS=Mus musculus GN=Abca2
PE=1 SV=4
Length = 2434
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 111/204 (54%), Gaps = 12/204 (5%)
Query: 5 DKCAIRVENAYKRHSS-KLPYVL--DKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNV 61
D +++EN K + S K+ +L D+LC+ V+ + LLG +G GKT+ +TG
Sbjct: 2047 DNDMVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDES 2106
Query: 62 LNGGNIHLS--------ITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEK 113
GG ++ + ++ LG+ PQ +L+ E T E + Y + G+ + +
Sbjct: 2107 TTGGEAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQV 2166
Query: 114 AEYLQALLHLNHFKRK-CGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIW 172
++ L L + K G+ SGG +R++S AI L+ P + LDEPT+G+DP +W
Sbjct: 2167 VKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLW 2226
Query: 173 NHLLYLAESGRTILITTHYIDEAK 196
N +L L ++GR++++T+H ++E +
Sbjct: 2227 NLILDLIKTGRSVVLTSHSMEECE 2250
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 113/198 (57%), Gaps = 13/198 (6%)
Query: 7 CAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITG-------Q 59
C ++ YK + KL L+KL + + ++ + S LG +G GKTT +S +TG
Sbjct: 991 CVDKLTKVYK-NDKKL--ALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGS 1047
Query: 60 NVLNGGNIHLSITS-KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQ 118
+ G +I + +K LG PQ L+ T++E + +Y + M+ ++I+++ + +
Sbjct: 1048 ATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDKMI 1107
Query: 119 ALLHLNHFKRK-CGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLY 177
L L++ + +LSGG +R++S+AI + +ILDEPT+G+DP IW+ L+
Sbjct: 1108 EDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWD-LIL 1166
Query: 178 LAESGRTILITTHYIDEA 195
+ GRTIL++TH++DEA
Sbjct: 1167 KYKPGRTILLSTHHMDEA 1184
>sp|Q5SSE9|ABCAD_MOUSE ATP-binding cassette sub-family A member 13 OS=Mus musculus GN=Abca13
PE=2 SV=1
Length = 5034
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 21/228 (9%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCI-------TGQNV 61
I V Y+ H + +L +T + I +LLG +G GKTT++S + +G
Sbjct: 3813 ISVTKEYEDHK----VAVQELTLTFHRDQITALLGTNGAGKTTIISMLMGLFPPTSGTIT 3868
Query: 62 LNGGNIHLSITS-KKQLGFMPQQISLYPEFTIDEMICYYGLIYG-----MSLQQIKEKAE 115
+NG N+ ++ +++LG PQQ L T+ E + + I LQQ K
Sbjct: 3869 INGKNLQTDLSKVREELGVCPQQDVLLDNLTVREHLMLFASIKAPWWTTKELQQQVNKT- 3927
Query: 116 YLQALLHLNHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHL 175
L + H + G LSGG +R++S+ I + + ++LDEP+SG+DP +W+ L
Sbjct: 3928 -LDEVELTQHQHKPAGVLSGGMKRKLSIGIAFMGMSKTVVLDEPSSGVDPCSRRSLWDIL 3986
Query: 176 LYLAESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEKY 222
L E GRTI+ TTH++DEA+ S + ++++G L +PP L E Y
Sbjct: 3987 LKYRE-GRTIIFTTHHLDEAEMLSDHVAVLQQGRLRCYAPPADLKETY 4033
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 29 LCMTVQKSTIYSLLGASGCGKTTLLSCITGQN----------VLNGGNIHLSITSKKQL- 77
+ + + + + LLG +G GK+T + G+ G + L+ K +
Sbjct: 4715 ISLGIPRGECFGLLGVNGAGKSTTFKILNGETPPSSGYTVIRTPQGDMVDLASAGKAGIL 4774
Query: 78 -GFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHL-NHFKRKCGSLSG 135
G+ PQQ +L T E + YY + G+ Q I E A L LHL +H + + SG
Sbjct: 4775 IGYCPQQDALDELLTGWEHLQYYCRLRGIPKQYIPEVAADLVRRLHLESHVDKPVATYSG 4834
Query: 136 GQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYIDEA 195
G +R++S A+ L+ P++L+LDEP+SG+DP +W + G ++T+H ++E
Sbjct: 4835 GTRRKLSTALALVGKPDILLLDEPSSGMDPCSKRYLWQTITQEVRDGCAAVLTSHSMEEC 4894
Query: 196 KK-SHMIGLMRKGILLEESPPKVLLEKY 222
+ + +M G PP+ + ++
Sbjct: 4895 EALCTRLAIMVDGSFRCLGPPQHIKNRF 4922
>sp|Q86UQ4|ABCAD_HUMAN ATP-binding cassette sub-family A member 13 OS=Homo sapiens GN=ABCA13
PE=2 SV=3
Length = 5058
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 17/226 (7%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQN-------V 61
+ V Y+ H + V+ L +T + I +LLG +G GKTT++S +TG + +
Sbjct: 3845 VSVTKEYEGHKA----VVQDLSLTFYRDQITALLGTNGAGKTTIISMLTGLHPPTSGTII 3900
Query: 62 LNGGNIHLSITS-KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQAL 120
+NG N+ ++ + +LG PQQ L T+ E + + I + + + Q L
Sbjct: 3901 INGKNLQTDLSRVRMELGVCPQQDILLDNLTVREHLLLFASIKAPQWTKKELHQQVNQTL 3960
Query: 121 LHLN---HFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLY 177
++ H ++ +LSGG +R++SL I + ++LDEPTSG+DP +W+ LL
Sbjct: 3961 QDVDLTQHQHKQTRALSGGLKRKLSLGIAFMGMSRTVVLDEPTSGVDPCSRHSLWDILLK 4020
Query: 178 LAESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEKY 222
E GRTI+ TTH++DEA+ S + +++ G L PP L E Y
Sbjct: 4021 YRE-GRTIIFTTHHLDEAEALSDRVAVLQHGRLRCCGPPFCLKEAY 4065
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 15 YKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGG--------- 65
Y+R + V D + + + K + LLG +G GK+T + G+ L G
Sbjct: 4727 YRRFFQNIIAVQD-ISLGIPKGECFGLLGVNGAGKSTTFKMLNGEVSLTSGHAIIRTPMG 4785
Query: 66 ---NIHLSITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLH 122
++ + T+ +G+ PQQ +L T E + YY + G+ Q I E A L LH
Sbjct: 4786 DAVDLSSAGTAGVLIGYCPQQDALDELLTGWEHLYYYCSLRGIPRQCIPEVAGDLIRRLH 4845
Query: 123 LN-HFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAES 181
L H + + SGG +R++S A+ L+ P++L+LDEP+SG+DP +W ++
Sbjct: 4846 LEAHADKPVATYSGGTKRKLSTALALVGKPDILLLDEPSSGMDPCSKRYLWQTIMKEVRE 4905
Query: 182 GRTILITTHYIDEAK 196
G ++T+H ++E +
Sbjct: 4906 GCAAVLTSHSMEECE 4920
>sp|O07016|YVFR_BACSU Uncharacterized ABC transporter ATP-binding protein YvfR
OS=Bacillus subtilis (strain 168) GN=yvfR PE=3 SV=1
Length = 301
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 14/239 (5%)
Query: 6 KCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGG 65
K A+ V N K K ++ + +++K I ++LG +G GKTT++S I G + G
Sbjct: 3 KEAVTVSNVTKHFQRK--TAVNNISFSIEKGEIAAILGPNGAGKTTVVSMILGLLKPSEG 60
Query: 66 NIHL------SITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQA 119
I L ++++G M Q++S+ P +DE++ + Y L +KE L A
Sbjct: 61 EIKLFNRVPDDQQVREKIGVMLQEVSVMPGLKVDEILELFRSYYPNPLS-MKELVS-LTA 118
Query: 120 LLHLNHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L + K + LSGGQ+RR+S A+ L +PELLILDEPT G+D W + L+
Sbjct: 119 LTKED-LKTRAEKLSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTIHGLS 177
Query: 180 ESGRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEKYNMKSLEDVFLLLSSK 237
+ G+TI+ +THY+ EA + I +G L+ + P + + +S+ F L SS+
Sbjct: 178 DQGKTIIFSTHYLQEADDAAQRILFFTEGQLVADGSPMQIRSRIQKQSVS--FTLHSSE 234
>sp|Q9ESR9|ABCA2_RAT ATP-binding cassette sub-family A member 2 OS=Rattus norvegicus
GN=Abca2 PE=1 SV=1
Length = 2434
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 109/204 (53%), Gaps = 12/204 (5%)
Query: 5 DKCAIRVENAYKRHSS-KLPYVL--DKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNV 61
D +++EN K + S K+ +L D+LC+ V+ + LLG +G GKT+ +TG
Sbjct: 2047 DNDMVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDES 2106
Query: 62 LNGGNIHLS--------ITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEK 113
GG ++ + ++ LG+ PQ +L+ E T E + Y + G+ + +
Sbjct: 2107 TTGGEAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQV 2166
Query: 114 AEYLQALLHLNHFKRK-CGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIW 172
+ L L K GS SGG +R++S AI L+ P + LDEPT+G+DP +W
Sbjct: 2167 VRWALEKLELTKCADKPAGSYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLW 2226
Query: 173 NHLLYLAESGRTILITTHYIDEAK 196
N +L L ++GR++++T+H ++E +
Sbjct: 2227 NLILDLIKTGRSVVLTSHSMEECE 2250
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 114/198 (57%), Gaps = 13/198 (6%)
Query: 7 CAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITG-------Q 59
C ++ YK + KL L+KL + + ++ + S LG +G GKTT +S +TG
Sbjct: 991 CVDKLTKVYK-NDKKL--ALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGS 1047
Query: 60 NVLNGGNIHLSITS-KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQ 118
+ G +I + +K LG PQ L+ + T++E + +Y + M+ ++I+++ + +
Sbjct: 1048 ATIYGHDIRTEMDEIRKNLGMCPQHNVLFDQLTVEEHLWFYSRLKSMAQEEIRKEMDKMI 1107
Query: 119 ALLHLNHFKRK-CGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLY 177
L L++ + +LSGG +R++S+AI + +ILDEPT+G+DP IW+ L+
Sbjct: 1108 EDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWD-LIL 1166
Query: 178 LAESGRTILITTHYIDEA 195
+ GRTIL++TH++DEA
Sbjct: 1167 KYKPGRTILLSTHHMDEA 1184
>sp|Q99758|ABCA3_HUMAN ATP-binding cassette sub-family A member 3 OS=Homo sapiens GN=ABCA3
PE=1 SV=2
Length = 1704
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 107/191 (56%), Gaps = 10/191 (5%)
Query: 16 KRHSSKLPYV-LDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHLS---I 71
K + ++P + +D+L + VQK + LLG +G GKTT +TG+ L G+ + I
Sbjct: 1388 KVYEQRVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESLTSGDAFVGGHRI 1447
Query: 72 TS-----KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAE-YLQALLHLNH 125
+S ++++G+ PQ +L T EM+ Y + G+ + I E L+ LL H
Sbjct: 1448 SSDVGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTLRGLLLEPH 1507
Query: 126 FKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTI 185
+ + SGG +R++S I L+ +P ++ LDEP++G+DPV +W+ + ESG+ I
Sbjct: 1508 ANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAI 1567
Query: 186 LITTHYIDEAK 196
+IT+H ++E +
Sbjct: 1568 IITSHSMEECE 1578
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 17/206 (8%)
Query: 17 RHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHLS------ 70
R +K + L + + + I LLG +G GKTT LS +TG G ++S
Sbjct: 540 RVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEISQ 599
Query: 71 --ITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHFKR 128
+ +K LG PQ L+ T+ E + +Y + G+S Q+ E+ ++ +LH+ +
Sbjct: 600 DMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCPEE---VKQMLHIIGLED 656
Query: 129 KCGS----LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRT 184
K S LSGG +R++S+ I L+ ++LILDEPTSG+D + IW+ LL +S RT
Sbjct: 657 KWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWD-LLQRQKSDRT 715
Query: 185 ILITTHYIDEAK-KSHMIGLMRKGIL 209
I++TTH++DEA I +M KG L
Sbjct: 716 IVLTTHFMDEADLLGDRIAIMAKGEL 741
>sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9
PE=1 SV=1
Length = 1624
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 14/203 (6%)
Query: 6 KCAIRVENAYKRHSSKLPYV--LDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLN 63
K AIR++N K ++ K V L + + + I +LLG SG GKTTLL+ ++G +V
Sbjct: 478 KEAIRIKNLKKEYAGKCERVEALKGVVFDIYEGQITALLGHSGAGKTTLLNILSGLSVPT 537
Query: 64 GGNIHLSITS----------KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEK 113
G++ + + K GF PQ + T+ E + + I G+ +++++
Sbjct: 538 SGSVTVYNHTLSRMADIENISKFTGFCPQSNVQFGFLTVKENLRLFAKIKGILPHEVEKE 597
Query: 114 AEYLQALLHLNHFKRKCG-SLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIW 172
+ + L + + + +LSGGQ R+++ I +L DP++L+LDEPT+G+DP+ IW
Sbjct: 598 VQRVVQELEMENIQDILAQNLSGGQNRKLTFGIAILGDPQVLLLDEPTAGLDPLSRHRIW 657
Query: 173 NHLLYLAESGRTILITTHYIDEA 195
N LL +S R IL +T +IDEA
Sbjct: 658 N-LLKEGKSDRVILFSTQFIDEA 679
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 3 LKDKCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVL 62
L+ + A + +N + + K+ C V+K + LLG +G GK+T + ITG
Sbjct: 1288 LRKEYAGKKKNCFSKRKKKIATRNVSFC--VKKGEVIGLLGHNGAGKSTTIKMITGDTKP 1345
Query: 63 NGGNIHLSITSKKQ----LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQ 118
G + L + + LG+ PQ+ +L+P T+ + + Y + G+ K + +
Sbjct: 1346 TAGQVILKGSGGGEPLGFLGYCPQENALWPNLTVRQHLEVYAAVKGL------RKGDAMI 1399
Query: 119 ALLHL-------NHFKRKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEI 171
A+ L + K +LS G +R++ +++L +P +++LDEP++G+DP +++
Sbjct: 1400 AITRLVDALKLQDQLKAPVKTLSEGIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQM 1459
Query: 172 WNHL-LYLAESGRTILITTHYIDEAK 196
W + + R L+TTHY+ EA+
Sbjct: 1460 WQVIRATFRNTERGALLTTHYMAEAE 1485
>sp|Q8RGC8|FBPC_FUSNN Fe(3+) ions import ATP-binding protein FbpC OS=Fusobacterium
nucleatum subsp. nucleatum (strain ATCC 25586 / CIP
101130 / JCM 8532 / LMG 13131) GN=fbpC PE=3 SV=1
Length = 371
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 124/223 (55%), Gaps = 12/223 (5%)
Query: 9 IRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIH 68
I++ENA KR+ + +++ L + +++ ++LLG SGCGKTTLL I G N + GN +
Sbjct: 5 IKIENAQKRYGDNI--IIENLSLDIKQGEFFTLLGPSGCGKTTLLRMIAGFNSIEKGNFY 62
Query: 69 LSIT-------SKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALL 121
+ +K+ +G + Q +++P T+++ + + +S +++K + + L+
Sbjct: 63 FNEKRINDLDPAKRNIGMVFQNYAIFPHLTVEQNVEFGLKNRKVSKEEMKIEIDKFLKLM 122
Query: 122 HLNHFK-RKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAE 180
++ +K R LSGGQQ+RV+LA L+ P++L++DEP S +D + E+ + +
Sbjct: 123 QIDEYKDRMPERLSGGQQQRVALARALVIKPDVLLMDEPLSNLDAKLRVEMRTAIKEIQN 182
Query: 181 S-GRTILITTHYIDEAKK-SHMIGLMRKGILLEESPPKVLLEK 221
S G T + TH +EA S I +M+ G + PK + ++
Sbjct: 183 SIGITTVYVTHDQEEAMAVSDRIAVMKDGEIQHLGQPKDIYQR 225
>sp|Q8R420|ABCA3_MOUSE ATP-binding cassette sub-family A member 3 OS=Mus musculus GN=Abca3
PE=2 SV=3
Length = 1704
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 102/181 (56%), Gaps = 9/181 (4%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHL---SITS-----KKQ 76
+D++ + VQK + LLG +G GKTT +TG+ + G+ + SI+S +++
Sbjct: 1398 AVDRISLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDAFVGGYSISSDIGKVRQR 1457
Query: 77 LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAE-YLQALLHLNHFKRKCGSLSG 135
+G+ PQ +L T EM+ Y + G+ + I E L+ LL H + + SG
Sbjct: 1458 MGYCPQFDALLDHMTGREMLVMYARLRGIPERLINACVENTLRGLLLEPHANKLVKTYSG 1517
Query: 136 GQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITTHYIDEA 195
G +R++S I L+ +P ++ LDEP++G+DPV +W+ + ESG+ I+IT+H ++E
Sbjct: 1518 GNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIVITSHSMEEC 1577
Query: 196 K 196
+
Sbjct: 1578 E 1578
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 20/211 (9%)
Query: 17 RHSSKLPYVLDK-------LCMTVQKSTIYSLLGASGCGKTTLLSCITG-------QNVL 62
+H SK+ V +K L + + + I LLG +G GKTT +S +TG +
Sbjct: 533 KHLSKVFQVGNKDKMGIRDLTLNLYEGQITVLLGHNGAGKTTTMSLLTGLFPPTSGHAYI 592
Query: 63 NGGNIHLSITS-KKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALL 121
+G I + +K LG PQ L+ T+ E + +Y + G+SLQ+ E+ + + +L
Sbjct: 593 HGYEISQDMAQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSLQKCPEEVKQMLHIL 652
Query: 122 HLNHFKRKCGS--LSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLA 179
L KR S LSGG +R++S+ I L+ ++L+LDEPTSG+D V IW+ LL
Sbjct: 653 SLED-KRDLRSKFLSGGMKRKLSIGIALIAGSKVLMLDEPTSGMDAVSRRAIWD-LLQQQ 710
Query: 180 ESGRTILITTHYIDEAK-KSHMIGLMRKGIL 209
+S RT+L+TTH++DEA I ++ KG L
Sbjct: 711 KSDRTVLLTTHFMDEADLLGDRIAILAKGEL 741
>sp|P54537|ARTM_BACSU Arginine transport ATP-binding protein ArtM OS=Bacillus subtilis
(strain 168) GN=artM PE=1 SV=1
Length = 240
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 124/237 (52%), Gaps = 30/237 (12%)
Query: 25 VLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHLSITS----------- 73
VL + T+ + + +++G SG GK+T L C+ NGG I + T
Sbjct: 16 VLKNISTTIAEGEVVAVIGPSGSGKSTFLRCLNLLEKPNGGTITIKDTEITKPKTNTLKV 75
Query: 74 KKQLGFMPQQISLYPEFTIDEMICYYGL-IYGMSLQQIKEKAEYLQALLHLNHFKRKC-- 130
++ +G + Q L+P T+ E I Y + + S Q +EKAE L L + F+++
Sbjct: 76 RENIGMVFQHFHLFPHKTVLENIMYAPVNVKKESKQAAQEKAEDL--LRKVGLFEKRNDY 133
Query: 131 -GSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRTILITT 189
LSGGQ++RV++A L +P++++ DEPTS +DP + +E+ + L E+G T++I T
Sbjct: 134 PNRLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEMVKEVLQVMKELVETGMTMVIVT 193
Query: 190 HYIDEAKK-SHMIGLMRKGILLEESPPKVLLEKYNMKSLEDVFLLLSSKQQHDRIEQ 245
H + AK+ + + M +G+++E+ PK + F+ SK+ D +E+
Sbjct: 194 HEMGFAKEVADRVLFMDQGMIVEDGNPK------------EFFMSPKSKRAQDFLEK 238
>sp|Q58429|Y1023_METJA Uncharacterized ABC transporter ATP-binding protein MJ1023
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1023
PE=3 SV=1
Length = 262
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 120/204 (58%), Gaps = 8/204 (3%)
Query: 6 KCAIRVENAYKRHSSKLPYVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGG 65
K I+VEN K K VLD++ V + I+ LLG +G GKTT L + G ++
Sbjct: 2 KPKIKVENLTKYFGDK--KVLDEISFEVYEGEIFGLLGHNGAGKTTTLRILAG--IIEEY 57
Query: 66 NIHLSITSKKQLGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNH 125
++ + K +G++P++ LY + + +++ ++G + GM ++I + +Y L +++
Sbjct: 58 TGYVEVNGK--IGYLPEERGLYRDEKVVDVLKFFGELAGMKKEEIAKSIDYWLNKLKISN 115
Query: 126 FK-RKCGSLSGGQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAESGRT 184
+K K LS G Q++V ++++H+P+++ILDEP SG+D V + + + L E G+T
Sbjct: 116 YKYSKIKELSKGNQQKVQFIVSVIHNPDIVILDEPFSGLDVVNVRLLRDIIFELKEEGKT 175
Query: 185 ILITTHYIDEAKK-SHMIGLMRKG 207
I+++TH +++ ++ + +++KG
Sbjct: 176 IILSTHQLEKIERLCDRVLILKKG 199
>sp|Q03ZQ0|POTA_LEUMM Spermidine/putrescine import ATP-binding protein PotA
OS=Leuconostoc mesenteroides subsp. mesenteroides
(strain ATCC 8293 / NCDO 523) GN=potA PE=3 SV=1
Length = 368
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 24 YVLDKLCMTVQKSTIYSLLGASGCGKTTLLSCITGQNVLNGGNIHLS-------ITSKKQ 76
+VL+ + + ++ Y+LLG SG GK+T+L I+GQ + G+I K++
Sbjct: 22 HVLNNVDLEIEAGKFYTLLGPSGSGKSTILKLISGQLTADSGDISFEGQRVNDVPAEKRK 81
Query: 77 LGFMPQQISLYPEFTIDEMICYYGLIYGMSLQQIKEKAEYLQALLHLNHF-KRKCGSLSG 135
+ + Q +L+P + + + + + GM+ +IK K + + L+ L+ F R+ LSG
Sbjct: 82 VNTVFQNYALFPNMNVFDNVAFGPTLKGMNKTEIKNKVKEMLNLVKLSDFVDREIDELSG 141
Query: 136 GQQRRVSLAITLLHDPELLILDEPTSGIDPVIAEEIWNHLLYLAES-GRTILITTHYIDE 194
GQQ+RV++A L +DPE+L+LDEP S +D + + + L + + G T + TH +E
Sbjct: 142 GQQQRVAIARALANDPEVLLLDEPLSALDYKLRKSMQYELREIQQRLGITFVFVTHDQEE 201
Query: 195 A-KKSHMIGLMRKGILLEESPPKVLLEK 221
A S I +M G++ + P+ + ++
Sbjct: 202 ALAMSDWIFVMNDGVIQQNGSPEDIYDE 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,548,175
Number of Sequences: 539616
Number of extensions: 4904497
Number of successful extensions: 25421
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3688
Number of HSP's successfully gapped in prelim test: 254
Number of HSP's that attempted gapping in prelim test: 15590
Number of HSP's gapped (non-prelim): 5249
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)