BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10603
(407 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 151/271 (55%), Gaps = 10/271 (3%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY + +A+KEI + D+R+ + + E+ + + + KN+V+Y G
Sbjct: 31 GKGTYGIVYAGRDLSNQVRIAIKEIP---ERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLP--EVLVRRYTKQLVDAISALHENTIVHRD 128
+ +FME G+L +L++S L E + YTKQ+++ + LH+N IVHRD
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
IK N+ + LK+ DFG++ +++ F GT YMAPE+ +D G+G
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEI-IDKGPRGYG 203
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGET-PTIPESLSDEGQAFAELCL 247
+A DIWSLGC ++EM++GK P+ E MFKVGM + P IPES+S E +AF C
Sbjct: 204 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCF 263
Query: 248 RHDPAQRATIFELLQHPFLIVSCEEDVCNPR 278
DP +RA +LL FL VS ++ P+
Sbjct: 264 EPDPDKRACANDLLVDEFLKVSSKKKKTQPK 294
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + LK+ DFG++ +++ F GT YMAPE+ +D G+G+A D
Sbjct: 152 NVLINTYSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEI-IDKGPRGYGKAAD 207
Query: 370 IWSLGCVLVEMSSGK 384
IWSLGC ++EM++GK
Sbjct: 208 IWSLGCTIIEMATGK 222
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 145/259 (55%), Gaps = 10/259 (3%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY + +A+KEI + D+R+ + + E+ + + + KN+V+Y G
Sbjct: 17 GKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLP--EVLVRRYTKQLVDAISALHENTIVHRD 128
+ +FME G+L +L++S L E + YTKQ+++ + LH+N IVHRD
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
IK N+ + LK+ DFG++ +++ F GT YMAPE+ +D G+G
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEI-IDKGPRGYG 189
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGET-PTIPESLSDEGQAFAELCL 247
+A DIWSLGC ++EM++GK P+ E MFKVGM + P IPES+S E +AF C
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCF 249
Query: 248 RHDPAQRATIFELLQHPFL 266
DP +RA +LL FL
Sbjct: 250 EPDPDKRACANDLLVDEFL 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + LK+ DFG++ +++ F GT YMAPE+ +D G+G+A D
Sbjct: 138 NVLINTYSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEI-IDKGPRGYGKAAD 193
Query: 370 IWSLGCVLVEMSSGK 384
IWSLGC ++EM++GK
Sbjct: 194 IWSLGCTIIEMATGK 208
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 143/263 (54%), Gaps = 12/263 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FGKVY A N ET L A K I + + ++D +VE+ IL + N+VK
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE---LEDYMVEIDILASCDHPNIVKLLDA 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +E C G +++++ E L E ++ KQ +DA++ LH+N I+HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHG 188
+ NI T +G+ +KL DFG + K +T + F+GT +MAPEV M +T+K +
Sbjct: 163 AGNILFTLDGD-IKLADFGVSAK---NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELC 246
D+WSLG L+EM+ + P E + +++ K+ E PT+ P S + F + C
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHELNP-MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKC 277
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L + R T +LLQHPF+ V
Sbjct: 278 LEKNVDARWTTSQLLQHPFVTVD 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHGRA 367
NI T +G+ +KL DFG + K +T + F+GT +MAPEV M +T+K +
Sbjct: 165 NILFTLDGD-IKLADFGVSAK---NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 368 VDIWSLGCVLVEMS 381
D+WSLG L+EM+
Sbjct: 221 ADVWSLGITLIEMA 234
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 143/263 (54%), Gaps = 12/263 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FGKVY A N ET L A K I + + ++D +VE+ IL + N+VK
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE---LEDYMVEIDILASCDHPNIVKLLDA 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +E C G +++++ E L E ++ KQ +DA++ LH+N I+HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHG 188
+ NI T +G+ +KL DFG + K +T + F+GT +MAPEV M +T+K +
Sbjct: 163 AGNILFTLDGD-IKLADFGVSAK---NTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELC 246
D+WSLG L+EM+ + P E + +++ K+ E PT+ P S + F + C
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHELNP-MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKC 277
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L + R T +LLQHPF+ V
Sbjct: 278 LEKNVDARWTTSQLLQHPFVTVD 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHGRA 367
NI T +G+ +KL DFG + K +T + F+GT +MAPEV M +T+K +
Sbjct: 165 NILFTLDGD-IKLADFGVSAK---NTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 368 VDIWSLGCVLVEMS 381
D+WSLG L+EM+
Sbjct: 221 ADVWSLGITLIEMA 234
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 143/263 (54%), Gaps = 12/263 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FGKVY A N ET L A K I + + ++D +VE+ IL + N+VK
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE---LEDYMVEIDILASCDHPNIVKLLDA 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +E C G +++++ E L E ++ KQ +DA++ LH+N I+HRD+K
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHG 188
+ NI T +G+ +KL DFG + K +T + F+GT +MAPEV M +T+K +
Sbjct: 163 AGNILFTLDGD-IKLADFGVSAK---NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELC 246
D+WSLG L+EM+ + P E + +++ K+ E PT+ P S + F + C
Sbjct: 219 YKADVWSLGITLIEMAEIEPPHHELNP-MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKC 277
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L + R T +LLQHPF+ V
Sbjct: 278 LEKNVDARWTTSQLLQHPFVTVD 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHGRA 367
NI T +G+ +KL DFG + K +T + F+GT +MAPEV M +T+K +
Sbjct: 165 NILFTLDGD-IKLADFGVSAK---NTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 368 VDIWSLGCVLVEMS 381
D+WSLG L+EM+
Sbjct: 221 ADVWSLGITLIEMA 234
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 141/258 (54%), Gaps = 15/258 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A++ ETG++VA+K++ + +++++ E+ I++ + ++VKYYG
Sbjct: 38 GEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++ + ME C G++ +++ L E + + + + LH +HRDIK
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIK 152
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
+ NI L EG++ KL DFG A ++ T + N +GT +MAPEV + +G+
Sbjct: 153 AGNILLNTEGHA-KLADFGVAGQL---TDXMAKRNXVIGTPFWMAPEVIQE---IGYNCV 205
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELCLR 248
DIWSLG +EM+ GK P+A+ + +F + PT PE SD F + CL
Sbjct: 206 ADIWSLGITAIEMAEGKPPYADIHP-MRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLV 264
Query: 249 HDPAQRATIFELLQHPFL 266
P QRAT +LLQHPF+
Sbjct: 265 KSPEQRATATQLLQHPFV 282
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 282 ASVLQDYLKLGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL 341
A++LQ LK L M + + A NI L EG++ KL DFG A ++ T +
Sbjct: 128 ATILQSTLKGLEYLHFMRKIHRDIKA-GNILLNTEGHA-KLADFGVAGQL---TDXMAKR 182
Query: 342 NGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKTNLSGVVVSAEVF 397
N +GT +MAPEV + +G+ DIWSLG +EM+ GK + + +F
Sbjct: 183 NXVIGTPFWMAPEVIQE---IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF 235
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 147/260 (56%), Gaps = 12/260 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FGKVY A N ETG L A K I+ + + ++D +VE+ IL + +VK G
Sbjct: 20 GDGAFGKVYKAKNKETGALAAAKVIETKSEEE---LEDYIVEIEILATCDHPYIVKLLGA 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
H ++ + +E C G +++++ + GL E ++ +Q+++A++ LH I+HRD+K
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 136
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHG 188
+ N+ +T EG+ ++L DFG + K + + + F+GT +MAPEV M +T K +
Sbjct: 137 AGNVLMTLEGD-IRLADFGVSAK---NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 192
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELC 246
DIWSLG L+EM+ + P E + +++ K+ + PT+ P S E + F ++
Sbjct: 193 YKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIA 251
Query: 247 LRHDPAQRATIFELLQHPFL 266
L +P R + +LL+HPF+
Sbjct: 252 LDKNPETRPSAAQLLEHPFV 271
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHGRA 367
N+ +T EG+ ++L DFG + K + + + F+GT +MAPEV M +T K +
Sbjct: 139 NVLMTLEGD-IRLADFGVSAK---NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYK 194
Query: 368 VDIWSLGCVLVEMSS 382
DIWSLG L+EM+
Sbjct: 195 ADIWSLGITLIEMAQ 209
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 147/260 (56%), Gaps = 12/260 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FGKVY A N ETG L A K I+ + + ++D +VE+ IL + +VK G
Sbjct: 28 GDGAFGKVYKAKNKETGALAAAKVIETKSEEE---LEDYIVEIEILATCDHPYIVKLLGA 84
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
H ++ + +E C G +++++ + GL E ++ +Q+++A++ LH I+HRD+K
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 144
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHG 188
+ N+ +T EG+ ++L DFG + K + + + F+GT +MAPEV M +T K +
Sbjct: 145 AGNVLMTLEGD-IRLADFGVSAK---NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELC 246
DIWSLG L+EM+ + P E + +++ K+ + PT+ P S E + F ++
Sbjct: 201 YKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIA 259
Query: 247 LRHDPAQRATIFELLQHPFL 266
L +P R + +LL+HPF+
Sbjct: 260 LDKNPETRPSAAQLLEHPFV 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHGRA 367
N+ +T EG+ ++L DFG + K + + + F+GT +MAPEV M +T K +
Sbjct: 147 NVLMTLEGD-IRLADFGVSAK---NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYK 202
Query: 368 VDIWSLGCVLVEMSS 382
DIWSLG L+EM+
Sbjct: 203 ADIWSLGITLIEMAQ 217
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 142/261 (54%), Gaps = 11/261 (4%)
Query: 13 GRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGVEI 72
G FGKVY A N ET L A K I + + ++D +VE+ IL + N+VK
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEE---LEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 73 HREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIKSA 132
+ + + +E C G +++++ E L E ++ KQ +DA++ LH+N I+HRD+K+
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 133 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHGRA 190
NI T +G+ +KL DFG + K + T + F+GT +MAPEV M +T+K +
Sbjct: 138 NILFTLDGD-IKLADFGVSAKNT--RTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELCLR 248
D+WSLG L+EM+ + P E + +++ K+ E PT+ P S + F + CL
Sbjct: 195 ADVWSLGITLIEMAEIEPPHHELNP-MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE 253
Query: 249 HDPAQRATIFELLQHPFLIVS 269
+ R T +LLQHPF+ V
Sbjct: 254 KNVDARWTTSQLLQHPFVTVD 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNK-VGHGRA 367
NI T +G+ +KL DFG + K + T + F+GT +MAPEV M +T+K +
Sbjct: 138 NILFTLDGD-IKLADFGVSAKNT--RTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 368 VDIWSLGCVLVEMS 381
D+WSLG L+EM+
Sbjct: 195 ADVWSLGITLIEMA 208
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 136/252 (53%), Gaps = 12/252 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+F +VY A G VA+K++Q+ DA+ D + E+ +L+ +N N++KYY
Sbjct: 41 GRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYAS 100
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDG---LPEVLVRRYTKQLVDAISALHENTIVHR 127
I E+ + +EL G L +++ + +PE V +Y QL A+ +H ++HR
Sbjct: 101 FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHR 160
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK AN+F+TA G +KLGD G S+ TT L VGT YM+PE + G+
Sbjct: 161 DIKPANVFITATG-VVKLGDLGLGRFFSSKTTAAHSL---VGTPYYMSPERIHEN---GY 213
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMFKVGMGETPTIP-ESLSDEGQAFAEL 245
DIWSLGC+L EM++ + P+ N Y + K+ + P +P + S+E + +
Sbjct: 214 NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNM 273
Query: 246 CLRHDPAQRATI 257
C+ DP +R +
Sbjct: 274 CINPDPEKRPDV 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+F+TA G +KLGD G S+ TT L VGT YM+PE + G+
Sbjct: 165 ANVFITATG-VVKLGDLGLGRFFSSKTTAAHSL---VGTPYYMSPERIHEN---GYNFKS 217
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWSLGC+L EM++ ++ G
Sbjct: 218 DIWSLGCLLYEMAALQSPFYG 238
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 140/261 (53%), Gaps = 15/261 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG G VYTA++ TG+ VA++++ L +Q + + E+ ++ N+V Y
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLDS 85
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G+L +V TE + E + ++ + A+ LH N ++HRDIK
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S NI L +G S+KL DFG +I+ + E+ VGT +MAPEV + +G
Sbjct: 144 SDNILLGMDG-SVKLTDFGFCAQITPEQSKRSEM---VGTPYWMAPEV---VTRKAYGPK 196
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELCLR 248
VDIWSLG + +EM G+ P+ ++ + ++ + TP + PE LS + F CL
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLD 255
Query: 249 HDPAQRATIFELLQHPFLIVS 269
D +R + ELLQH FL ++
Sbjct: 256 MDVEKRGSAKELLQHQFLKIA 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L +G S+KL DFG +I+ + E+ VGT +MAPEV + +G VD
Sbjct: 146 NILLGMDG-SVKLTDFGFCAQITPEQSKRSEM---VGTPYWMAPEV---VTRKAYGPKVD 198
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG + +EM G+
Sbjct: 199 IWSLGIMAIEMIEGE 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 140/261 (53%), Gaps = 15/261 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG G VYTA++ TG+ VA++++ L +Q + + E+ ++ N+V Y
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLDS 85
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G+L +V TE + E + ++ + A+ LH N ++HRDIK
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S NI L +G S+KL DFG +I+ + + + VGT +MAPEV + +G
Sbjct: 144 SDNILLGMDG-SVKLTDFGFCAQITPEQS---KRSXMVGTPYWMAPEV---VTRKAYGPK 196
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELCLR 248
VDIWSLG + +EM G+ P+ ++ + ++ + TP + PE LS + F CL
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE 255
Query: 249 HDPAQRATIFELLQHPFLIVS 269
D +R + ELLQH FL ++
Sbjct: 256 MDVEKRGSAKELLQHQFLKIA 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L +G S+KL DFG +I+ + + + VGT +MAPEV + +G VD
Sbjct: 146 NILLGMDG-SVKLTDFGFCAQITPEQS---KRSXMVGTPYWMAPEV---VTRKAYGPKVD 198
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG + +EM G+
Sbjct: 199 IWSLGIMAIEMIEGE 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 140/261 (53%), Gaps = 15/261 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG G VYTA++ TG+ VA++++ L +Q + + E+ ++ N+V Y
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLDS 85
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G+L +V TE + E + ++ + A+ LH N ++HRDIK
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S NI L +G S+KL DFG +I+ + + + VGT +MAPEV + +G
Sbjct: 144 SDNILLGMDG-SVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEV---VTRKAYGPK 196
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELCLR 248
VDIWSLG + +EM G+ P+ ++ + ++ + TP + PE LS + F CL
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLD 255
Query: 249 HDPAQRATIFELLQHPFLIVS 269
D +R + ELLQH FL ++
Sbjct: 256 MDVEKRGSAKELLQHQFLKIA 276
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L +G S+KL DFG +I+ + + + VGT +MAPEV + +G VD
Sbjct: 146 NILLGMDG-SVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEV---VTRKAYGPKVD 198
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG + +EM G+
Sbjct: 199 IWSLGIMAIEMIEGE 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 141/281 (50%), Gaps = 21/281 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG VY A + E+VA+K++ + +D++ E+R L+ + N ++Y G
Sbjct: 63 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC 122
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L ME C G+ L++ + L EV + T + ++ LH + ++HRD+K
Sbjct: 123 YLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 181
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
+ NI L+ G +KLGDFGSA ++ N FVGT +MAPEV + ++ +
Sbjct: 182 AGNILLSEPG-LVKLGDFGSA-------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE-SLSDEGQAFAELCLRH 249
VD+WSLG +E++ K P ++ ++ + E+P + S+ + F + CL+
Sbjct: 234 VDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 292
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLK 290
P R T LL+H F++ R P +V+ D ++
Sbjct: 293 IPQDRPTSEVLLKHRFVL----------RERPPTVIMDLIQ 323
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 308 RANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
+A L +E +KLGDFGSA ++ N FVGT +MAPEV + ++ +
Sbjct: 181 KAGNILLSEPGLVKLGDFGSA-------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 368 VDIWSLGCVLVEMSSGKTNL 387
VD+WSLG +E++ K L
Sbjct: 234 VDVWSLGITCIELAERKPPL 253
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 140/261 (53%), Gaps = 15/261 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG G VYTA++ TG+ VA++++ L +Q + + E+ ++ N+V Y
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLDS 86
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G+L +V TE + E + ++ + A+ LH N ++HRDIK
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 144
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S NI L +G S+KL DFG +I+ + + + VGT +MAPEV + +G
Sbjct: 145 SDNILLGMDG-SVKLTDFGFCAQITPEQS---KRSXMVGTPYWMAPEV---VTRKAYGPK 197
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELCLR 248
VDIWSLG + +EM G+ P+ ++ + ++ + TP + PE LS + F CL
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE 256
Query: 249 HDPAQRATIFELLQHPFLIVS 269
D +R + EL+QH FL ++
Sbjct: 257 MDVEKRGSAKELIQHQFLKIA 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L +G S+KL DFG +I+ + + + VGT +MAPEV + +G VD
Sbjct: 147 NILLGMDG-SVKLTDFGFCAQITPEQS---KRSXMVGTPYWMAPEV---VTRKAYGPKVD 199
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG + +EM G+
Sbjct: 200 IWSLGIMAIEMIEGE 214
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 141/281 (50%), Gaps = 21/281 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG VY A + E+VA+K++ + +D++ E+R L+ + N ++Y G
Sbjct: 24 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC 83
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L ME C G+ L++ + L EV + T + ++ LH + ++HRD+K
Sbjct: 84 YLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 142
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
+ NI L+ G +KLGDFGSA ++ N FVGT +MAPEV + ++ +
Sbjct: 143 AGNILLSEPG-LVKLGDFGSA-------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE-SLSDEGQAFAELCLRH 249
VD+WSLG +E++ K P ++ ++ + E+P + S+ + F + CL+
Sbjct: 195 VDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESPALQSGHWSEYFRNFVDSCLQK 253
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLK 290
P R T LL+H F++ R P +V+ D ++
Sbjct: 254 IPQDRPTSEVLLKHRFVL----------RERPPTVIMDLIQ 284
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 308 RANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
+A L +E +KLGDFGSA ++ N FVGT +MAPEV + ++ +
Sbjct: 142 KAGNILLSEPGLVKLGDFGSA-------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 368 VDIWSLGCVLVEMSSGKTNL 387
VD+WSLG +E++ K L
Sbjct: 195 VDVWSLGITCIELAERKPPL 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 140/261 (53%), Gaps = 15/261 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG G VYTA++ TG+ VA++++ L +Q + + E+ ++ N+V Y
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLDS 86
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G+L +V TE + E + ++ + A+ LH N ++HR+IK
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 144
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S NI L +G S+KL DFG +I+ + + + VGT +MAPEV + +G
Sbjct: 145 SDNILLGMDG-SVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEV---VTRKAYGPK 197
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTI--PESLSDEGQAFAELCLR 248
VDIWSLG + +EM G+ P+ ++ + ++ + TP + PE LS + F CL
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE 256
Query: 249 HDPAQRATIFELLQHPFLIVS 269
D +R + EL+QH FL ++
Sbjct: 257 MDVEKRGSAKELIQHQFLKIA 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L +G S+KL DFG +I+ + + + VGT +MAPEV + +G VD
Sbjct: 147 NILLGMDG-SVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEV---VTRKAYGPKVD 199
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG + +EM G+
Sbjct: 200 IWSLGIMAIEMIEGE 214
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 137/262 (52%), Gaps = 12/262 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V+ ++N T ++VA+K I L + D E+ +L + + KYYG
Sbjct: 32 GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSSYVTKYYGS 89
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ ++ + ME G+ L+++ E + K+++ + LH +HRDIK
Sbjct: 90 YLKGSKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
+AN+ L+ +G+ +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 148 AANVLLSEQGD-VKLADFGVAGQL---TDTQIKRNTFVGTPFWMAPEVIQQS---AYDSK 200
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
DIWSLG +E++ G+ P ++ +++F + PT+ + + F + CL D
Sbjct: 201 ADIWSLGITAIELAKGEPPNSDMHP-MRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKD 259
Query: 251 PAQRATIFELLQHPFLIVSCEE 272
P+ R T ELL+H F++ + ++
Sbjct: 260 PSFRPTAKELLKHKFIVKNSKK 281
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+ L+ +G+ +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 149 ANVLLSEQGD-VKLADFGVAGQL---TDTQIKRNTFVGTPFWMAPEVIQQS---AYDSKA 201
Query: 369 DIWSLGCVLVEMSSGK 384
DIWSLG +E++ G+
Sbjct: 202 DIWSLGITAIELAKGE 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 12/262 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V+ ++N T ++VA+K I L + D E+ +L + + KYYG
Sbjct: 31 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSPYVTKYYGS 88
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ ++ + ME G+ L++ L E + ++++ + LH +HRDIK
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
+AN+ L+ G +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 147 AANVLLSEHGE-VKLADFGVAGQL---TDTQIKRNXFVGTPFWMAPEVIKQS---AYDSK 199
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
DIWSLG +E++ G+ P +E +++F + PT+ + S + F E CL +
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHP-MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKE 258
Query: 251 PAQRATIFELLQHPFLIVSCEE 272
P+ R T ELL+H F++ + ++
Sbjct: 259 PSFRPTAKELLKHKFILRNAKK 280
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+ L+ G +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 148 ANVLLSEHGE-VKLADFGVAGQL---TDTQIKRNXFVGTPFWMAPEVIKQS---AYDSKA 200
Query: 369 DIWSLGCVLVEMSSGK 384
DIWSLG +E++ G+
Sbjct: 201 DIWSLGITAIELARGE 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 12/262 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V+ ++N T ++VA+K I L + D E+ +L + + KYYG
Sbjct: 36 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSPYVTKYYGS 93
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ ++ + ME G+ L++ L E + ++++ + LH +HRDIK
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
+AN+ L+ G +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 152 AANVLLSEHGE-VKLADFGVAGQL---TDTQIKRNTFVGTPFWMAPEVIKQS---AYDSK 204
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
DIWSLG +E++ G+ P +E +++F + PT+ + S + F E CL +
Sbjct: 205 ADIWSLGITAIELARGEPPHSELHP-MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKE 263
Query: 251 PAQRATIFELLQHPFLIVSCEE 272
P+ R T ELL+H F++ + ++
Sbjct: 264 PSFRPTAKELLKHKFILRNAKK 285
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+ L+ G +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 153 ANVLLSEHGE-VKLADFGVAGQL---TDTQIKRNTFVGTPFWMAPEVIKQS---AYDSKA 205
Query: 369 DIWSLGCVLVEMSSGK 384
DIWSLG +E++ G+
Sbjct: 206 DIWSLGITAIELARGE 221
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 135/258 (52%), Gaps = 15/258 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G G V A TG+ VA+K++ L KQ + E+ I+ + N+V Y
Sbjct: 54 GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRREL---LFNEVVIMRDYHHDNVVDMYSS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G L +V T + E + ++ A+S LH ++HRDIK
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S +I LT++G +KL DFG ++S VP VGT +MAPEV +++ +G
Sbjct: 169 SDSILLTSDGR-IKLSDFGFCAQVSKE--VPKR-KXLVGTPYWMAPEVI---SRLPYGTE 221
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAELCLR 248
VDIWSLG +++EM G+ P+ + Q M ++ P + + +S + F +L L
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFN-EPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLV 280
Query: 249 HDPAQRATIFELLQHPFL 266
+P+QRAT ELL HPFL
Sbjct: 281 REPSQRATAQELLGHPFL 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
+I LT++G +KL DFG ++S VP VGT +MAPEV +++ +G VD
Sbjct: 171 SILLTSDGR-IKLSDFGFCAQVSKE--VPKR-KXLVGTPYWMAPEVI---SRLPYGTEVD 223
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG +++EM G+
Sbjct: 224 IWSLGIMVIEMIDGE 238
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 132/256 (51%), Gaps = 12/256 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+VY ++N T E+VA+K I L + D E+ +L + + +Y+G
Sbjct: 28 GKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSPYITRYFGS 85
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ ++ + ME G+ L++ L E + ++++ + LH +HRDIK
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
+AN+ L+ +G+ +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 144 AANVLLSEQGD-VKLADFGVAGQL---TDTQIKRNXFVGTPFWMAPEVIKQS---AYDFK 196
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
DIWSLG +E++ G+ P ++ +++F + PT+ S + F E CL D
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHP-MRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKD 255
Query: 251 PAQRATIFELLQHPFL 266
P R T ELL+H F+
Sbjct: 256 PRFRPTAKELLKHKFI 271
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+ L+ +G+ +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 145 ANVLLSEQGD-VKLADFGVAGQL---TDTQIKRNXFVGTPFWMAPEVIKQS---AYDFKA 197
Query: 369 DIWSLGCVLVEMSSGK 384
DIWSLG +E++ G+
Sbjct: 198 DIWSLGITAIELAKGE 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 12/262 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V+ ++N T ++VA+K I L + D E+ +L + + KYYG
Sbjct: 16 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSPYVTKYYGS 73
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ ++ + ME G+ L++ L E + ++++ + LH +HRDIK
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
+AN+ L+ G +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 132 AANVLLSEHGE-VKLADFGVAGQL---TDTQIKRNXFVGTPFWMAPEVIKQS---AYDSK 184
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
DIWSLG +E++ G+ P +E +++F + PT+ + S + F E CL +
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHP-MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKE 243
Query: 251 PAQRATIFELLQHPFLIVSCEE 272
P+ R T ELL+H F++ + ++
Sbjct: 244 PSFRPTAKELLKHKFILRNAKK 265
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+ L+ G +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 133 ANVLLSEHGE-VKLADFGVAGQL---TDTQIKRNXFVGTPFWMAPEVIKQS---AYDSKA 185
Query: 369 DIWSLGCVLVEMSSGK 384
DIWSLG +E++ G+
Sbjct: 186 DIWSLGITAIELARGE 201
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 12/262 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V+ ++N T ++VA+K I L + D E+ +L + + KYYG
Sbjct: 16 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ--EITVLSQCDSPYVTKYYGS 73
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ ++ + ME G+ L++ L E + ++++ + LH +HRDIK
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
+AN+ L+ G +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 132 AANVLLSEHGE-VKLADFGVAGQL---TDTQIKRNTFVGTPFWMAPEVIKQS---AYDSK 184
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
DIWSLG +E++ G+ P +E +++F + PT+ + S + F E CL +
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHP-MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKE 243
Query: 251 PAQRATIFELLQHPFLIVSCEE 272
P+ R T ELL+H F++ + ++
Sbjct: 244 PSFRPTAKELLKHKFILRNAKK 265
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+ L+ G +KL DFG A ++ T + N FVGT +MAPEV + +
Sbjct: 133 ANVLLSEHGE-VKLADFGVAGQL---TDTQIKRNTFVGTPFWMAPEVIKQS---AYDSKA 185
Query: 369 DIWSLGCVLVEMSSGK 384
DIWSLG +E++ G+
Sbjct: 186 DIWSLGITAIELARGE 201
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 134/258 (51%), Gaps = 15/258 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G G V A +G+LVA+K++ L KQ + E+ I+ +N+V+ Y
Sbjct: 29 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYNS 85
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G L +V T + E + ++ A+S LH ++HRDIK
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 143
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S +I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G
Sbjct: 144 SDSILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPE 196
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIP--ESLSDEGQAFAELCLR 248
VDIWSLG +++EM G+ P+ + + M + P + +S + F + L
Sbjct: 197 VDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 255
Query: 249 HDPAQRATIFELLQHPFL 266
DPAQRAT ELL+HPFL
Sbjct: 256 RDPAQRATAAELLKHPFL 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
+I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G VD
Sbjct: 146 SILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPEVD 198
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG +++EM G+
Sbjct: 199 IWSLGIMVIEMVDGE 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 134/258 (51%), Gaps = 15/258 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G G V A +G+LVA+K++ L KQ + E+ I+ +N+V+ Y
Sbjct: 33 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYNS 89
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G L +V T + E + ++ A+S LH ++HRDIK
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 147
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S +I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G
Sbjct: 148 SDSILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPE 200
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIP--ESLSDEGQAFAELCLR 248
VDIWSLG +++EM G+ P+ + + M + P + +S + F + L
Sbjct: 201 VDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 259
Query: 249 HDPAQRATIFELLQHPFL 266
DPAQRAT ELL+HPFL
Sbjct: 260 RDPAQRATAAELLKHPFL 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
+I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G VD
Sbjct: 150 SILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPEVD 202
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG +++EM G+
Sbjct: 203 IWSLGIMVIEMVDGE 217
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 132/257 (51%), Gaps = 13/257 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G G V A +G+LVA+K++ L KQ + E+ I+ +N+V+ Y
Sbjct: 40 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYNS 96
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G L +V T + E + ++ A+S LH ++HRDIK
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 154
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S +I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G
Sbjct: 155 SDSILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPE 207
Query: 191 VDIWSLGCVLVEMSSGKRPW-AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VDIWSLG +++EM G+ P+ E M + + +S + F + L
Sbjct: 208 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 267
Query: 250 DPAQRATIFELLQHPFL 266
DPAQRAT ELL+HPFL
Sbjct: 268 DPAQRATAAELLKHPFL 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
+I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G VD
Sbjct: 157 SILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPEVD 209
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG +++EM G+
Sbjct: 210 IWSLGIMVIEMVDGE 224
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 134/258 (51%), Gaps = 15/258 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G G V A +G+LVA+K++ L KQ + E+ I+ +N+V+ Y
Sbjct: 38 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYNS 94
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G L +V T + E + ++ A+S LH ++HRDIK
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 152
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S +I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G
Sbjct: 153 SDSILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPE 205
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIP--ESLSDEGQAFAELCLR 248
VDIWSLG +++EM G+ P+ + + M + P + +S + F + L
Sbjct: 206 VDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 264
Query: 249 HDPAQRATIFELLQHPFL 266
DPAQRAT ELL+HPFL
Sbjct: 265 RDPAQRATAAELLKHPFL 282
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
+I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G VD
Sbjct: 155 SILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPEVD 207
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG +++EM G+
Sbjct: 208 IWSLGIMVIEMVDGE 222
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 132/257 (51%), Gaps = 13/257 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G G V A +G+LVA+K++ L KQ + E+ I+ +N+V+ Y
Sbjct: 83 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYNS 139
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G L +V T + E + ++ A+S LH ++HRDIK
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S +I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G
Sbjct: 198 SDSILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPE 250
Query: 191 VDIWSLGCVLVEMSSGKRPW-AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VDIWSLG +++EM G+ P+ E M + + +S + F + L
Sbjct: 251 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 310
Query: 250 DPAQRATIFELLQHPFL 266
DPAQRAT ELL+HPFL
Sbjct: 311 DPAQRATAAELLKHPFL 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
+I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G VD
Sbjct: 200 SILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPEVD 252
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG +++EM G+
Sbjct: 253 IWSLGIMVIEMVDGE 267
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 132/257 (51%), Gaps = 13/257 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G G V A +G+LVA+K++ L KQ + E+ I+ +N+V+ Y
Sbjct: 160 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL---LFNEVVIMRDYQHENVVEMYNS 216
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +E+ + ME G L +V T + E + ++ A+S LH ++HRDIK
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 274
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
S +I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G
Sbjct: 275 SDSILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPE 327
Query: 191 VDIWSLGCVLVEMSSGKRPW-AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VDIWSLG +++EM G+ P+ E M + + +S + F + L
Sbjct: 328 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 387
Query: 250 DPAQRATIFELLQHPFL 266
DPAQRAT ELL+HPFL
Sbjct: 388 DPAQRATAAELLKHPFL 404
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
+I LT +G +KL DFG ++S VP VGT +MAPE+ +++ +G VD
Sbjct: 277 SILLTHDGR-VKLSDFGFCAQVSKE--VPRR-KXLVGTPYWMAPELI---SRLPYGPEVD 329
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG +++EM G+
Sbjct: 330 IWSLGIMVIEMVDGE 344
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 131/262 (50%), Gaps = 15/262 (5%)
Query: 8 VSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
V G+G G V A +G VA+K + L KQ + E+ I+ N+V+
Sbjct: 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL---LFNEVVIMRDYQHFNVVEM 107
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y + EE+ + ME G L +V L E + + ++ A++ LH ++HR
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIKS +I LT +G +KL DFG +IS VP VGT +MAPEV ++ +
Sbjct: 166 DIKSDSILLTLDGR-VKLSDFGFCAQIS--KDVPKR-KXLVGTPYWMAPEVI---SRSLY 218
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPES--LSDEGQAFAEL 245
VDIWSLG +++EM G+ P+ DS Q M ++ P + S +S + F E
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFS-DSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLER 277
Query: 246 CLRHDPAQRATIFELLQHPFLI 267
L DP +RAT ELL HPFL+
Sbjct: 278 MLVRDPQERATAQELLDHPFLL 299
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
+I LT +G +KL DFG +IS VP VGT +MAPEV ++ + VD
Sbjct: 171 SILLTLDGR-VKLSDFGFCAQISK--DVPKR-KXLVGTPYWMAPEVI---SRSLYATEVD 223
Query: 370 IWSLGCVLVEMSSGK 384
IWSLG +++EM G+
Sbjct: 224 IWSLGIMVIEMVDGE 238
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 153/290 (52%), Gaps = 26/290 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI-NQKNLVKYYG 69
G G +G+VY + +TG+L A+K + + + +++ E+ +L+ + +N+ YYG
Sbjct: 33 GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE----EEIKQEINMLKKYSHHRNIATYYG 88
Query: 70 VEIHR------EEMVLFMELCTEGTLESLVQSTE-DGLPEVLVRRYTKQLVDAISALHEN 122
I + +++ L ME C G++ L+++T+ + L E + ++++ +S LH++
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH 148
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-D 181
++HRDIK N+ LT E +KL DFG + ++ TV G N F+GT +MAPEV D
Sbjct: 149 KVIHRDIKGQNVLLT-ENAEVKLVDFGVSAQLD--RTV-GRRNTFIGTPYWMAPEVIACD 204
Query: 182 TN-KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIP-ESLSDEG 239
N + D+WSLG +EM+ G P + + +F + P + + S +
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-MRALFLIPRNPAPRLKSKKWSKKF 263
Query: 240 QAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYL 289
Q+F E CL + +QR +L++HPF+ D N R V L+D++
Sbjct: 264 QSFIESCLVKNHSQRPATEQLMKHPFI-----RDQPNERQVRIQ-LKDHI 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTN-KVGHGRA 367
N+ LT E +KL DFG + ++ TV G N F+GT +MAPEV D N +
Sbjct: 159 NVLLT-ENAEVKLVDFGVSAQLD--RTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFK 214
Query: 368 VDIWSLGCVLVEMSSGKTNL 387
D+WSLG +EM+ G L
Sbjct: 215 SDLWSLGITAIEMAEGAPPL 234
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 21/268 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLV-ELRILEGINQKNLVKYYG 69
G G +G+ G+++ KE+ +A K MLV E+ +L + N+V+YY
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE--KQMLVSEVNLLRELKHPNIVRYYD 72
Query: 70 VEIHREEMVLF--MELCTEGTLESLVQS---TEDGLPEVLVRRYTKQLVDAISALHE--- 121
I R L+ ME C G L S++ L E V R QL A+ H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 122 --NTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
+T++HRD+K AN+FL + N +KLGDFG A +I H T + FVGT YM+PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQN-VKLGDFGLA-RILNHDTSFAK--AFVGTPYYMSPE-- 186
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
N++ + DIWSLGC+L E+ + P+ + S ++ K+ G+ IP SDE
Sbjct: 187 -QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREGKFRRIPYRYSDEL 244
Query: 240 QAFAELCLRHDPAQRATIFELLQHPFLI 267
L R ++ E+L++P ++
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLIL 272
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+FL + N +KLGDFG A +I H T + FVGT YM+PE N++ +
Sbjct: 145 ANVFLDGKQN-VKLGDFGLA-RILNHDTSFAK--AFVGTPYYMSPE---QMNRMSYNEKS 197
Query: 369 DIWSLGCVLVEMSS 382
DIWSLGC+L E+ +
Sbjct: 198 DIWSLGCLLYELCA 211
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 70
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ +S H + ++HRD+
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDL 129
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 179
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 180 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 292
Query: 277 P 277
P
Sbjct: 293 P 293
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 180
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 21/268 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLV-ELRILEGINQKNLVKYYG 69
G G +G+ G+++ KE+ +A K MLV E+ +L + N+V+YY
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE--KQMLVSEVNLLRELKHPNIVRYYD 72
Query: 70 VEIHREEMVLF--MELCTEGTLESLVQS---TEDGLPEVLVRRYTKQLVDAISALHE--- 121
I R L+ ME C G L S++ L E V R QL A+ H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 122 --NTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
+T++HRD+K AN+FL + N +KLGDFG A +I H T + FVGT YM+PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQN-VKLGDFGLA-RILNHDTSFAK--TFVGTPYYMSPE-- 186
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
N++ + DIWSLGC+L E+ + P+ + S ++ K+ G+ IP SDE
Sbjct: 187 -QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREGKFRRIPYRYSDEL 244
Query: 240 QAFAELCLRHDPAQRATIFELLQHPFLI 267
L R ++ E+L++P ++
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLIL 272
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+FL + N +KLGDFG A +I H T + FVGT YM+PE N++ +
Sbjct: 145 ANVFLDGKQN-VKLGDFGLA-RILNHDTSFAK--TFVGTPYYMSPE---QMNRMSYNEKS 197
Query: 369 DIWSLGCVLVEMSS 382
DIWSLGC+L E+ +
Sbjct: 198 DIWSLGCLLYELCA 211
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 142/274 (51%), Gaps = 17/274 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRI-LEGINQKNLVKYYG 69
G+G +G V V+ +G+++A+K I+ D + K +L++L + + + +V++YG
Sbjct: 31 GRGAYGSVNKMVHKPSGQIMAVKRIR--STVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 70 VEIHREEMVLFMELCT---EGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHEN-TIV 125
+ + MEL + + + + +D +PE ++ + T V A++ L EN I+
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKII 148
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE-VFMDTNK 184
HRDIK +NI L GN +KL DFG IS G + YMAPE + ++
Sbjct: 149 HRDIKPSNILLDRSGN-IKLCDFG----ISGQLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQA--- 241
G+ D+WSLG L E+++G+ P+ +++S + + +V G+ P + S E
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFI 263
Query: 242 -FAELCLRHDPAQRATIFELLQHPFLIVSCEEDV 274
F LCL D ++R ELL+HPF+++ E V
Sbjct: 264 NFVNLCLTKDESKRPKYKELLKHPFILMYEERAV 297
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE-VFMDTNKVGHGRA 367
+NI L GN +KL DFG IS G + YMAPE + ++ G+
Sbjct: 155 SNILLDRSGN-IKLCDFG----ISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVR 209
Query: 368 VDIWSLGCVLVEMSSGK 384
D+WSLG L E+++G+
Sbjct: 210 SDVWSLGITLYELATGR 226
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 71
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 72 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 131 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 180
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 181 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 293
Query: 277 P 277
P
Sbjct: 294 P 294
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 134 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 181
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 70
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGXK 179
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 180 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 292
Query: 277 P 277
P
Sbjct: 293 P 293
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGXKY-- 180
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 70
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 179
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 180 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 292
Query: 277 P 277
P
Sbjct: 293 P 293
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 180
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 71
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 72 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 131 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 180
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 181 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 293
Query: 277 P 277
P
Sbjct: 294 P 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 134 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 181
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 19 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 77
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 78 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 136
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 137 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGXK 186
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 187 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 299
Query: 277 P 277
P
Sbjct: 300 P 300
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 140 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGXKY-- 187
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPG 213
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 16 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 74
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 75 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 134 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 183
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 184 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 296
Query: 277 P 277
P
Sbjct: 297 P 297
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 137 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 184
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPG 210
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 73
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 74 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 182
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 183 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 295
Query: 277 P 277
P
Sbjct: 296 P 296
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 136 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 183
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 72
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 73 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 132 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 181
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 182 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 294
Query: 277 P 277
P
Sbjct: 295 P 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 135 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 182
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 72
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 73 -IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 132 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 181
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 182 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 294
Query: 277 P 277
P
Sbjct: 295 P 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 135 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 182
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 73
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 74 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 182
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 183 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 295
Query: 277 P 277
P
Sbjct: 296 P 296
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 136 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 183
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 19 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 77
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 78 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 136
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 137 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 186
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 187 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 299
Query: 277 P 277
P
Sbjct: 300 P 300
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 140 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 187
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPG 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 141/286 (49%), Gaps = 39/286 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V N +TG +VA+K+ L +D K + E+++L+ + +NLV V
Sbjct: 34 GEGSYGMVMKCRNKDTGRIVAIKKF-LESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++ L E L+ L + +GL +V++Y Q+++ I H + I+HRDIK
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDL-ELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL-NGFVGTQAYMAPEVFMDTNKVGHGR 189
NI ++ G +KL DFG A ++A PGE+ + V T+ Y APE+ + V +G+
Sbjct: 152 PENILVSQSG-VVKLCDFGFARTLAA----PGEVYDDEVATRWYRAPELLV--GDVKYGK 204
Query: 190 AVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVG---------MGETPT-----IP 232
AVD+W++GC++ EM G+ + ++ D Y IM +G + P +P
Sbjct: 205 AVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLP 264
Query: 233 E------------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
E LS+ A+ CL DP +R ELL H F
Sbjct: 265 EIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 313 LTAEGNSLKLGDFGSAVKISAHTTVPGEL-NGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L ++ +KL DFG A ++A PGE+ + V T+ Y APE+ + V +G+AVD+W
Sbjct: 156 LVSQSGVVKLCDFGFARTLAA----PGEVYDDEVATRWYRAPELLV--GDVKYGKAVDVW 209
Query: 372 SLGCVLVEMSSGKTNLSG 389
++GC++ EM G+ G
Sbjct: 210 AIGCLVTEMFMGEPLFPG 227
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 72
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 73 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 132 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 181
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 182 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 294
Query: 277 P 277
P
Sbjct: 295 P 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 135 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 182
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 70
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 179
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 180 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 292
Query: 277 P 277
P
Sbjct: 293 P 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 180
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 70
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 179
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 180 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 292
Query: 277 P 277
P
Sbjct: 293 P 293
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 180
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 69
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 70 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 178
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 179 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 291
Query: 277 P 277
P
Sbjct: 292 P 292
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 132 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 179
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 70
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 179
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 180 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 292
Query: 277 P 277
P
Sbjct: 293 P 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 180
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 14 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 72
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 73 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 132 KPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 181
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 182 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 294
Query: 277 P 277
P
Sbjct: 295 P 295
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 135 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 182
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPG 208
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 70
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 71 -IHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 130 KPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 179
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 180 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 292
Query: 277 P 277
P
Sbjct: 293 P 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 180
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 71
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 72 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 131 KPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 180
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 181 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 293
Query: 277 P 277
P
Sbjct: 294 P 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 134 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 181
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 69
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 70 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 178
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 179 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 291
Query: 277 P 277
P
Sbjct: 292 P 292
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 132 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 179
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 70
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 179
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 180 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 292
Query: 277 P 277
P
Sbjct: 293 P 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 180
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 69
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 70 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 178
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 179 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 291
Query: 277 P 277
P
Sbjct: 292 P 292
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 132 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 179
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 73
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 74 -IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 182
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 183 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 295
Query: 277 P 277
P
Sbjct: 296 P 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 136 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 183
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 69
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 70 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 178
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 179 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 291
Query: 277 P 277
P
Sbjct: 292 P 292
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 132 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 179
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 71
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 72 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 131 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 180
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 181 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 293
Query: 277 P 277
P
Sbjct: 294 P 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 134 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 181
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 73
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 74 -IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 KPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 182
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 183 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 295
Query: 277 P 277
P
Sbjct: 296 P 296
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 136 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 183
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 129/268 (48%), Gaps = 21/268 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLV-ELRILEGINQKNLVKYYG 69
G G +G+ G+++ KE+ +A K MLV E+ +L + N+V+YY
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE--KQMLVSEVNLLRELKHPNIVRYYD 72
Query: 70 VEIHREEMVLF--MELCTEGTLESLVQS---TEDGLPEVLVRRYTKQLVDAISALHE--- 121
I R L+ ME C G L S++ L E V R QL A+ H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 122 --NTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
+T++HRD+K AN+FL + N +KLGDFG A ++ E FVGT YM+PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQN-VKLGDFGLARILNHDEDFAKE---FVGTPYYMSPE-- 186
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
N++ + DIWSLGC+L E+ + P+ + S ++ K+ G+ IP SDE
Sbjct: 187 -QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREGKFRRIPYRYSDEL 244
Query: 240 QAFAELCLRHDPAQRATIFELLQHPFLI 267
L R ++ E+L++P ++
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLIL 272
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+FL + N +KLGDFG A ++ E FVGT YM+PE N++ +
Sbjct: 145 ANVFLDGKQN-VKLGDFGLARILNHDEDFAKE---FVGTPYYMSPE---QMNRMSYNEKS 197
Query: 369 DIWSLGCVLVEMSS 382
DIWSLGC+L E+ +
Sbjct: 198 DIWSLGCLLYELCA 211
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 141/306 (46%), Gaps = 40/306 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V+ N +TG++VA+K+ L ++D K L E+R+L+ + NLV V
Sbjct: 12 GEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + L E C L L + G+PE LV+ T Q + A++ H++ +HRD+K
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHEL-DRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVK 129
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNKVGHGR 189
NI +T + +KL DFG A ++ + + V T+ Y +PE+ + DT +G
Sbjct: 130 PENILITKH-SVIKLCDFGFARLLTGPSDY---YDDEVATRWYRSPELLVGDTQ---YGP 182
Query: 190 AVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVG----------------MGETPT 230
VD+W++GCV E+ SG W ++ D Y I +G G
Sbjct: 183 PVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIP 242
Query: 231 IPESLSDEGQAFAEL----------CLRHDPAQRATIFELLQHPFLIVSCE-EDVCNPRS 279
PE + F + CL DP +R T +LL HP+ E ED+
Sbjct: 243 DPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAKEHD 302
Query: 280 VPASVL 285
PA L
Sbjct: 303 KPAENL 308
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM-DTNKVGHGRAV 368
NI +T + +KL DFG A ++ + + V T+ Y +PE+ + DT +G V
Sbjct: 132 NILITKH-SVIKLCDFGFARLLTGPSDY---YDDEVATRWYRSPELLVGDTQ---YGPPV 184
Query: 369 DIWSLGCVLVEMSSG 383
D+W++GCV E+ SG
Sbjct: 185 DVWAIGCVFAELLSG 199
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 13 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 71
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 72 -IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 131 KPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 180
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 181 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 293
Query: 277 P 277
P
Sbjct: 294 P 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 134 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 181
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPG 207
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 16 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 74
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 75 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 134 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 183
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 184 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 296
Query: 277 P 277
P
Sbjct: 297 P 297
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 137 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 184
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPG 210
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 73
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 74 -IHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 182
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 183 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 295
Query: 277 P 277
P
Sbjct: 296 P 296
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 136 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 183
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 15 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 73
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 74 -IHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 182
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 183 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 295
Query: 277 P 277
P
Sbjct: 296 P 296
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 136 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 183
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPG 209
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V + E R+L+ L Y
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA 73
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ H + + ME G L S E E R Y ++V A+ LH +V+RDI
Sbjct: 74 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 130 KSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +G
Sbjct: 132 KLENLMLDKDGH-IKITDFGLCKEGISDGAT----MKTFCGTPEYLAPEVLEDND---YG 183
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
RAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +LS E ++ L+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 249 HDPAQR-----ATIFELLQHPFLIVSCEEDVCNPRSVP 281
DP QR + E+++H F + +DV + +P
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +GRAV
Sbjct: 135 NLMLDKDGH-IKITDFGLCKEGISDGAT----MKTFCGTPEYLAPEVLEDND---YGRAV 186
Query: 369 DIWSLGCVLVEMSSGK 384
D W LG V+ EM G+
Sbjct: 187 DWWGLGVVMYEMMCGR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 138/290 (47%), Gaps = 48/290 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 70
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCK 179
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 180 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
P+ P+ L ++G++ L +DP +R + L HPF
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 NLLINTEG-AIKLADFGLARAFGVPVRTYXHEVV---------TLWYRAPEILLGCKY-- 180
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V + E R+L+ L Y
Sbjct: 17 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA 76
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ H + + ME G L S E E R Y ++V A+ LH +V+RDI
Sbjct: 77 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 134
Query: 130 KSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +G
Sbjct: 135 KLENLMLDKDGH-IKITDFGLCKEGISDGAT----MKTFCGTPEYLAPEVLEDND---YG 186
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
RAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +LS E ++ L+
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 244
Query: 249 HDPAQR-----ATIFELLQHPFLIVSCEEDVCNPRSVP 281
DP QR + E+++H F + +DV + +P
Sbjct: 245 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 282
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +GRAV
Sbjct: 138 NLMLDKDGH-IKITDFGLCKEGISDGAT----MKTFCGTPEYLAPEVLEDND---YGRAV 189
Query: 369 DIWSLGCVLVEMSSGK 384
D W LG V+ EM G+
Sbjct: 190 DWWGLGVVMYEMMCGR 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V + E R+L+ L Y
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA 73
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ H + + ME G L S E E R Y ++V A+ LH +V+RDI
Sbjct: 74 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 130 KSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +G
Sbjct: 132 KLENLMLDKDGH-IKITDFGLCKEGISDGAT----MKXFCGTPEYLAPEVLEDND---YG 183
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
RAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +LS E ++ L+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 249 HDPAQR-----ATIFELLQHPFLIVSCEEDVCNPRSVP 281
DP QR + E+++H F + +DV + +P
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +GRAV
Sbjct: 135 NLMLDKDGH-IKITDFGLCKEGISDGAT----MKXFCGTPEYLAPEVLEDND---YGRAV 186
Query: 369 DIWSLGCVLVEMSSGK 384
D W LG V+ EM G+
Sbjct: 187 DWWGLGVVMYEMMCGR 202
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 139/273 (50%), Gaps = 32/273 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHK--QNDARFVKDMLVELRILEGINQKNLVKYY 68
G+G F V +N ETG+ A+K + + K + +D+ E I + ++V+
Sbjct: 33 GKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL- 91
Query: 69 GVEIHREEMVLFM--------ELCTEGTLESLVQSTEDGL--PEVLVRRYTKQLVDAISA 118
+E + + +L+M +LC E +V+ + G E + Y +Q+++A+
Sbjct: 92 -LETYSSDGMLYMVFEFMDGADLCFE-----IVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
H+N I+HRD+K N+ L ++ NS +KLGDFG A+++ V G G VGT +MAP
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG---GRVGTPHFMAP 202
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLS 236
EV + +G+ VD+W G +L + SG P+ Y + ++ + G+ P S
Sbjct: 203 EV---VKREPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNPRQWS 257
Query: 237 DEGQAFAELCLRH---DPAQRATIFELLQHPFL 266
++ +L R DPA+R T++E L HP+L
Sbjct: 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ NS +KLGDFG A+++ V G G VGT +MAPEV + +G+
Sbjct: 160 NVLLASKENSAPVKLGDFGVAIQLGESGLVAG---GRVGTPHFMAPEV---VKREPYGKP 213
Query: 368 VDIWSLGCVLVEMSSG 383
VD+W G +L + SG
Sbjct: 214 VDVWGCGVILFILLSG 229
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V + E R+L+ L Y
Sbjct: 19 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA 78
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ H + + ME G L S E E R Y ++V A+ LH +V+RDI
Sbjct: 79 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 136
Query: 130 KSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +G
Sbjct: 137 KLENLMLDKDGH-IKITDFGLCKEGISDGAT----MKXFCGTPEYLAPEVLEDND---YG 188
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
RAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +LS E ++ L+
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 246
Query: 249 HDPAQR-----ATIFELLQHPFLIVSCEEDVCNPRSVP 281
DP QR + E+++H F + +DV + +P
Sbjct: 247 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 284
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +GRAV
Sbjct: 140 NLMLDKDGH-IKITDFGLCKEGISDGAT----MKXFCGTPEYLAPEVLEDND---YGRAV 191
Query: 369 DIWSLGCVLVEMSSGK 384
D W LG V+ EM G+
Sbjct: 192 DWWGLGVVMYEMMCGR 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+K+I+L + + + E+ +L+ +N N+VK V
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 69
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 70 -IHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 178
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 179 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 291
Query: 277 P 277
P
Sbjct: 292 P 292
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 132 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 179
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V + E R+L+ L Y
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA 73
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ H + + ME G L S E E R Y ++V A+ LH +V+RDI
Sbjct: 74 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 130 KSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +G
Sbjct: 132 KLENLMLDKDGH-IKITDFGLCKEGISDGAT----MKTFCGTPEYLAPEVLEDND---YG 183
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
RAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +LS E ++ L+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 249 HDPAQR-----ATIFELLQHPFLIVSCEEDVCNPRSVP 281
DP QR + E+++H F + +DV + +P
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +GRAV
Sbjct: 135 NLMLDKDGH-IKITDFGLCKEGISDGAT----MKTFCGTPEYLAPEVLEDND---YGRAV 186
Query: 369 DIWSLGCVLVEMSSGK 384
D W LG V+ EM G+
Sbjct: 187 DWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V + E R+L+ L Y
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA 73
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ H + + ME G L S E E R Y ++V A+ LH +V+RDI
Sbjct: 74 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 130 KSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +G
Sbjct: 132 KLENLMLDKDGH-IKITDFGLCKEGISDGAT----MKXFCGTPEYLAPEVLEDND---YG 183
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
RAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +LS E ++ L+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 249 HDPAQR-----ATIFELLQHPFLIVSCEEDVCNPRSVP 281
DP QR + E+++H F + +DV + +P
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +GRAV
Sbjct: 135 NLMLDKDGH-IKITDFGLCKEGISDGAT----MKXFCGTPEYLAPEVLEDND---YGRAV 186
Query: 369 DIWSLGCVLVEMSSGK 384
D W LG V+ EM G+
Sbjct: 187 DWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V + E R+L+ L Y
Sbjct: 14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA 73
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ H + + ME G L S E E R Y ++V A+ LH +V+RDI
Sbjct: 74 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 130 KSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +G
Sbjct: 132 KLENLMLDKDGH-IKITDFGLCKEGISDGAT----MKXFCGTPEYLAPEVLEDND---YG 183
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
RAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +LS E ++ L+
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLK 241
Query: 249 HDPAQR-----ATIFELLQHPFLIVSCEEDVCNPRSVP 281
DP QR + E+++H F + +DV + +P
Sbjct: 242 KDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +G+ +K+ DFG + IS T + F GT Y+APEV D + +GRAV
Sbjct: 135 NLMLDKDGH-IKITDFGLCKEGISDGAT----MKXFCGTPEYLAPEVLEDND---YGRAV 186
Query: 369 DIWSLGCVLVEMSSGK 384
D W LG V+ EM G+
Sbjct: 187 DWWGLGVVMYEMMCGR 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 141/301 (46%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+ +I+L + + + E+ +L+ +N N+VK V
Sbjct: 12 GEGTYGVVYKARNKLTGEVVALXKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 70
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 71 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 179
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 180 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 292
Query: 277 P 277
P
Sbjct: 293 P 293
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 133 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 180
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPG 206
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 141/301 (46%), Gaps = 53/301 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A N TGE+VA+ +I+L + + + E+ +L+ +N N+VK V
Sbjct: 11 GEGTYGVVYKARNKLTGEVVALXKIRLDTETEG-VPSTAIREISLLKELNHPNIVKLLDV 69
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
IH E ++ L E + + + S G+P L++ Y QL+ ++ H + ++HRD+
Sbjct: 70 -IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 130 KSANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
K N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCK 178
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGE------------- 227
+ AVDIWSLGC+ EM + + + +E D ++I +G +
Sbjct: 179 Y--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 228 TPTIPE-----------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
P+ P+ L ++G++ L +DP +R + L HPF +DV
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-----QDVTK 291
Query: 277 P 277
P
Sbjct: 292 P 292
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG ++KL DFG A V+ H V T Y APE+ +
Sbjct: 132 NLLINTEG-AIKLADFGLARAFGVPVRTYTHEVV---------TLWYRAPEILLGCKY-- 179
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSG 389
+ AVDIWSLGC+ EM + + G
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPG 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEIXINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 245 LVENPSARITIPDI 258
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 14/272 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 72
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 73 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 130 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 185
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 247 LRHDPAQRATIFELLQHPFLIVSCEEDVCNPR 278
L +P+ R TI ++ + + ++ PR
Sbjct: 246 LVENPSARITIPDIKKDRWYNKPLKKGAKRPR 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 136 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 192
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 193 SCGIVLTAMLAGE 205
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEIXINKMLNHENVVKFYG- 72
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 73 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 130 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL--KRREFH 185
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 246 LVENPSARITIPDI 259
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 136 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL--KRREFHAEPVDVW 192
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 193 SCGIVLTAMLAGE 205
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 143/286 (50%), Gaps = 13/286 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F KV A + TG VA+K I + N K + E+RI++ +N N+VK + V
Sbjct: 21 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK-LFREVRIMKILNHPNIVKLFEV 79
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + L ME + G + LV + E R +Q+V A+ H+ IVHRD+
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQKRIVHRDL 137
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K+ N+ L A+ N +K+ DFG S TV G+L+ F G+ Y APE+F K G
Sbjct: 138 KAENLLLDADMN-IKIADFG----FSNEFTVGGKLDTFCGSPPYAAPELF--QGKKYDGP 190
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WSLG +L + SG P+ N + + + + IP +S + + + L
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVL 248
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGIVL 295
+P +R T+ ++++ ++ EED P P + D ++ I++
Sbjct: 249 NPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDIMV 294
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A+ N +K+ DFG S TV G+L+ F G+ Y APE+F K G VD
Sbjct: 141 NLLLDADMN-IKIADFG----FSNEFTVGGKLDTFCGSPPYAAPELF--QGKKYDGPEVD 193
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WSLG +L + SG G
Sbjct: 194 VWSLGVILYTLVSGSLPFDG 213
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 151/294 (51%), Gaps = 31/294 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQL--HKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G G G+V+ +TG ++A+K+++ +K+ + R + D+ V +L+ + +V+ +
Sbjct: 34 GSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV---VLKSHDCPYIVQCF 90
Query: 69 GVEIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVH 126
G I ++ + MEL GT E L + + +PE ++ + T +V A+ L E + ++H
Sbjct: 91 GTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIH 148
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF--MDTNK 184
RD+K +NI L G +KL DFG IS + G AYMAPE D K
Sbjct: 149 RDVKPSNILLDERGQ-IKLCDFG----ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG--QAF 242
+ D+WSLG LVE+++G+ P+ ++++++ KV E P +P + G Q+F
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSF 263
Query: 243 AELCLRHDPAQRATIFELLQHPFL---------IVSCEEDVC----NPRSVPAS 283
+ CL D +R +LL+H F+ + S +DV +PRS P+S
Sbjct: 264 VKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAKTESPRSGPSS 317
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF--MDTNKVGHGR 366
+NI L G +KL DFG IS + G AYMAPE D K +
Sbjct: 154 SNILLDERGQ-IKLCDFG----ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDI 208
Query: 367 AVDIWSLGCVLVEMSSGKTNLSGVVVSAEVF 397
D+WSLG LVE+++G+ EV
Sbjct: 209 RADVWSLGISLVELATGQFPYKNCKTDFEVL 239
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 14/272 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATIFELLQHPFLIVSCEEDVCNPR 278
L +P+ R TI ++ + + ++ PR
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKKGAKRPR 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 142/286 (49%), Gaps = 13/286 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F KV A + TG VA+K I + N K + E+RI++ +N N+VK + V
Sbjct: 24 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK-LFREVRIMKILNHPNIVKLFEV 82
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + L ME + G + LV + E R +Q+V A+ H+ IVHRD+
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQKRIVHRDL 140
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K+ N+ L A+ N +K+ DFG S TV G+L+ F G Y APE+F K G
Sbjct: 141 KAENLLLDADMN-IKIADFG----FSNEFTVGGKLDAFCGAPPYAAPELF--QGKKYDGP 193
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WSLG +L + SG P+ N + + + + IP +S + + + L
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVL 251
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGIVL 295
+P +R T+ ++++ ++ EED P P + D ++ I++
Sbjct: 252 NPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDIMV 297
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A+ N +K+ DFG S TV G+L+ F G Y APE+F K G VD
Sbjct: 144 NLLLDADMN-IKIADFG----FSNEFTVGGKLDAFCGAPPYAAPELF--QGKKYDGPEVD 196
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WSLG +L + SG G
Sbjct: 197 VWSLGVILYTLVSGSLPFDG 216
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 14/272 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEIXINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATIFELLQHPFLIVSCEEDVCNPR 278
L +P+ R TI ++ + + ++ PR
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKKGAKRPR 276
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 14/251 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATI 257
L +P+ R TI
Sbjct: 245 LVENPSARITI 255
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 72
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 73 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 130 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 185
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 246 LVENPSARITIPDI 259
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 136 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 192
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 193 SCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 72
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 73 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 130 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 185
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 246 LVENPSARITIPDI 259
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 136 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 192
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 193 SCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 72
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 73 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 130 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 185
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 246 LVENPSARITIPDI 259
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 136 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 192
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 193 SCGIVLTAMLAGE 205
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 14/251 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 72
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 73 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 130 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 185
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 247 LRHDPAQRATI 257
L +P+ R TI
Sbjct: 246 LVENPSARITI 256
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 136 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 192
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 193 SCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 245 LVENPSARITIPDI 258
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 14/251 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATI 257
L +P+ R TI
Sbjct: 245 LVENPSARITI 255
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 245 LVENPSARITIPDI 258
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 14 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 70
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 71 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 127
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 128 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 183
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 243
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 244 LVENPSARITIPDI 257
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 134 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 190
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 191 SCGIVLTAMLAGE 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 245 LVENPSARITIPDI 258
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 72
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 73 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 130 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 185
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 246 LVENPSARITIPDI 259
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 136 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 192
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 193 SCGIVLTAMLAGE 205
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 32/278 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G V A E VA+K I L K + + ++L E++ + + N+V YY
Sbjct: 19 GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQST------EDG-LPEVLVRRYTKQLVDAISALHENT 123
+ ++E+ L M+L + G++ +++ + G L E + +++++ + LH+N
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL------NGFVGTQAYMAPE 177
+HRD+K+ NI L +G S+++ DFG +SA G++ FVGT +MAPE
Sbjct: 137 QIHRDVKAGNILLGEDG-SVQIADFG----VSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSD 237
V G+ DIWS G +E+++G P+ +Y +M + + P++ + D
Sbjct: 192 VMEQVR--GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL-QNDPPSLETGVQD 248
Query: 238 E------GQAFAE---LCLRHDPAQRATIFELLQHPFL 266
+ G++F + LCL+ DP +R T ELL+H F
Sbjct: 249 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 12/82 (14%)
Query: 308 RANIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL------NGFVGTQAYMAPEVFMDTNK 361
+A L E S+++ DFG +SA G++ FVGT +MAPEV
Sbjct: 143 KAGNILLGEDGSVQIADFG----VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR- 197
Query: 362 VGHGRAVDIWSLGCVLVEMSSG 383
G+ DIWS G +E+++G
Sbjct: 198 -GYDFKADIWSFGITAIELATG 218
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 14/272 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATIFELLQHPFLIVSCEEDVCNPR 278
L +P+ R TI ++ + + ++ PR
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKKGAKRPR 276
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 14/251 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATI 257
L +P+ R TI
Sbjct: 245 LVENPSARITI 255
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 245 LVENPSARITIPDI 258
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 140/278 (50%), Gaps = 32/278 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G V A E VA+K I L K + + ++L E++ + + N+V YY
Sbjct: 24 GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 71 EIHREEMVLFMELCTEGTLESLVQST------EDG-LPEVLVRRYTKQLVDAISALHENT 123
+ ++E+ L M+L + G++ +++ + G L E + +++++ + LH+N
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL------NGFVGTQAYMAPE 177
+HRD+K+ NI L +G S+++ DFG +SA G++ FVGT +MAPE
Sbjct: 142 QIHRDVKAGNILLGEDG-SVQIADFG----VSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSD 237
V G+ DIWS G +E+++G P+ +Y +M + + P++ + D
Sbjct: 197 VMEQVR--GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL-QNDPPSLETGVQD 253
Query: 238 E------GQAFAE---LCLRHDPAQRATIFELLQHPFL 266
+ G++F + LCL+ DP +R T ELL+H F
Sbjct: 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 12/82 (14%)
Query: 308 RANIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL------NGFVGTQAYMAPEVFMDTNK 361
+A L E S+++ DFG +SA G++ FVGT +MAPEV
Sbjct: 148 KAGNILLGEDGSVQIADFG----VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR- 202
Query: 362 VGHGRAVDIWSLGCVLVEMSSG 383
G+ DIWS G +E+++G
Sbjct: 203 -GYDFKADIWSFGITAIELATG 223
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 133/274 (48%), Gaps = 22/274 (8%)
Query: 6 FSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHK-----QNDARFVKDMLVELRILEGIN 60
S + G G G+V A +T + VA+K I K +A ++ E+ IL+ +N
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 61 QKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
++K E+ + +EL G L V + L E + Y Q++ A+ LH
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLH 131
Query: 121 ENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGE---LNGFVGTQAYMA 175
EN I+HRD+K N+ L+++ +K+ DFG H+ + GE + GT Y+A
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-------HSKILGETSLMRTLCGTPTYLA 184
Query: 176 PEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE-- 233
PEV + G+ RAVD WSLG +L SG P++E+ + + ++ G+ IPE
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 234 -SLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+S++ + L DP R T E L+HP+L
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGE---LNGFVGTQAYMAPEVFMDTNKVGH 364
N+ L+++ +K+ DFG H+ + GE + GT Y+APEV + G+
Sbjct: 144 NVLLSSQEEDCLIKITDFG-------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 365 GRAVDIWSLGCVLVEMSSG 383
RAVD WSLG +L SG
Sbjct: 197 NRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 16/271 (5%)
Query: 6 FSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHK-----QNDARFVKDMLVELRILEGIN 60
S + G G G+V A +T + VA+K I K +A ++ E+ IL+ +N
Sbjct: 20 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 79
Query: 61 QKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
++K E+ + +EL G L V + L E + Y Q++ A+ LH
Sbjct: 80 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLH 137
Query: 121 ENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
EN I+HRD+K N+ L+++ +K+ DFG + KI T++ + GT Y+APEV
Sbjct: 138 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-KILGETSL---MRTLCGTPTYLAPEV 193
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE---SL 235
+ G+ RAVD WSLG +L SG P++E+ + + ++ G+ IPE +
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 253
Query: 236 SDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
S++ + L DP R T E L+HP+L
Sbjct: 254 SEKALDLVKKLLVVDPKARFTTEEALRHPWL 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L+++ +K+ DFG + KI T++ + GT Y+APEV + G+ RA
Sbjct: 150 NVLLSSQEEDCLIKITDFGHS-KILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRA 205
Query: 368 VDIWSLGCVLVEMSSG 383
VD WSLG +L SG
Sbjct: 206 VDCWSLGVILFICLSG 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 133/274 (48%), Gaps = 22/274 (8%)
Query: 6 FSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHK-----QNDARFVKDMLVELRILEGIN 60
S + G G G+V A +T + VA+K I K +A ++ E+ IL+ +N
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 61 QKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
++K E+ + +EL G L V + L E + Y Q++ A+ LH
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLH 131
Query: 121 ENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGE---LNGFVGTQAYMA 175
EN I+HRD+K N+ L+++ +K+ DFG H+ + GE + GT Y+A
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-------HSKILGETSLMRTLCGTPTYLA 184
Query: 176 PEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE-- 233
PEV + G+ RAVD WSLG +L SG P++E+ + + ++ G+ IPE
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 234 -SLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+S++ + L DP R T E L+HP+L
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGE---LNGFVGTQAYMAPEVFMDTNKVGH 364
N+ L+++ +K+ DFG H+ + GE + GT Y+APEV + G+
Sbjct: 144 NVLLSSQEEDCLIKITDFG-------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 365 GRAVDIWSLGCVLVEMSSG 383
RAVD WSLG +L SG
Sbjct: 197 NRAVDCWSLGVILFICLSG 215
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 125/251 (49%), Gaps = 14/251 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AVN T E VA+K + + + D +++ E+ I +N +N+VK+YG
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINAMLNHENVVKFYG- 72
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 73 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 129
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 130 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 185
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 245
Query: 247 LRHDPAQRATI 257
L +P+ R TI
Sbjct: 246 LVENPSARITI 256
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 136 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 192
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 193 SCGIVLTAMLAGE 205
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 133/274 (48%), Gaps = 22/274 (8%)
Query: 6 FSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHK-----QNDARFVKDMLVELRILEGIN 60
S + G G G+V A +T + VA+K I K +A ++ E+ IL+ +N
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 61 QKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
++K E+ + +EL G L V + L E + Y Q++ A+ LH
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLH 131
Query: 121 ENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGE---LNGFVGTQAYMA 175
EN I+HRD+K N+ L+++ +K+ DFG H+ + GE + GT Y+A
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-------HSKILGETSLMRTLCGTPTYLA 184
Query: 176 PEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE-- 233
PEV + G+ RAVD WSLG +L SG P++E+ + + ++ G+ IPE
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 234 -SLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+S++ + L DP R T E L+HP+L
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGE---LNGFVGTQAYMAPEVFMDTNKVGH 364
N+ L+++ +K+ DFG H+ + GE + GT Y+APEV + G+
Sbjct: 144 NVLLSSQEEDCLIKITDFG-------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 365 GRAVDIWSLGCVLVEMSSG 383
RAVD WSLG +L SG
Sbjct: 197 NRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 133/274 (48%), Gaps = 22/274 (8%)
Query: 6 FSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHK-----QNDARFVKDMLVELRILEGIN 60
S + G G G+V A +T + VA+K I K +A ++ E+ IL+ +N
Sbjct: 13 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 72
Query: 61 QKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
++K E+ + +EL G L V + L E + Y Q++ A+ LH
Sbjct: 73 HPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFYQMLLAVQYLH 130
Query: 121 ENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGE---LNGFVGTQAYMA 175
EN I+HRD+K N+ L+++ +K+ DFG H+ + GE + GT Y+A
Sbjct: 131 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-------HSKILGETSLMRTLCGTPTYLA 183
Query: 176 PEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE-- 233
PEV + G+ RAVD WSLG +L SG P++E+ + + ++ G+ IPE
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 243
Query: 234 -SLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+S++ + L DP R T E L+HP+L
Sbjct: 244 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGE---LNGFVGTQAYMAPEVFMDTNKVGH 364
N+ L+++ +K+ DFG H+ + GE + GT Y+APEV + G+
Sbjct: 143 NVLLSSQEEDCLIKITDFG-------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 195
Query: 365 GRAVDIWSLGCVLVEMSSG 383
RAVD WSLG +L SG
Sbjct: 196 NRAVDCWSLGVILFICLSG 214
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 7 SVSPGQGRFGKVYTAVNNETGELVAMKEIQLHK-----QNDARFVKDMLVELRILEGINQ 61
S + G G G+V A +T + VA++ I K +A ++ E+ IL+ +N
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE 121
++K E+ + +EL G L V + L E + Y Q++ A+ LHE
Sbjct: 214 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHE 271
Query: 122 NTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGE---LNGFVGTQAYMAP 176
N I+HRD+K N+ L+++ +K+ DFG H+ + GE + GT Y+AP
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDFG-------HSKILGETSLMRTLCGTPTYLAP 324
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE--- 233
EV + G+ RAVD WSLG +L SG P++E+ + + ++ G+ IPE
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 384
Query: 234 SLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+S++ + L DP R T E L+HP+L
Sbjct: 385 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 417
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGE---LNGFVGTQAYMAPEVFMDTNKVGH 364
N+ L+++ +K+ DFG H+ + GE + GT Y+APEV + G+
Sbjct: 283 NVLLSSQEEDCLIKITDFG-------HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 335
Query: 365 GRAVDIWSLGCVLVEMSSG 383
RAVD WSLG +L SG
Sbjct: 336 NRAVDCWSLGVILFICLSG 354
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 134/270 (49%), Gaps = 16/270 (5%)
Query: 7 SVSPGQGRFGKVYTAVNNETGELVAMKEIQLHK-----QNDARFVKDMLVELRILEGINQ 61
S + G G G+V A +T + VA++ I K +A ++ E+ IL+ +N
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE 121
++K E+ + +EL G L V + L E + Y Q++ A+ LHE
Sbjct: 200 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHE 257
Query: 122 NTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
N I+HRD+K N+ L+++ +K+ DFG + KI T++ + GT Y+APEV
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHS-KILGETSL---MRTLCGTPTYLAPEVL 313
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE---SLS 236
+ G+ RAVD WSLG +L SG P++E+ + + ++ G+ IPE +S
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 373
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFL 266
++ + L DP R T E L+HP+L
Sbjct: 374 EKALDLVKKLLVVDPKARFTTEEALRHPWL 403
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L+++ +K+ DFG + KI T++ + GT Y+APEV + G+ RA
Sbjct: 269 NVLLSSQEEDCLIKITDFGHS-KILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRA 324
Query: 368 VDIWSLGCVLVEMSSG 383
VD WSLG +L SG
Sbjct: 325 VDCWSLGVILFICLSG 340
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F KV A + TG+ VA+K I + N + K + E+RI++ +N N+VK + V
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEV 81
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + L ME + G + LV + E R +Q+V A+ H+ IVHRD+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K+ N+ L A+ N +K+ DFG S T +L+ F G+ Y APE+F K G
Sbjct: 140 KAENLLLDADMN-IKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELF--QGKKYDGP 192
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WSLG +L + SG P+ N + + + + IP +S + + + L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 250
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQD 287
+P++R T+ ++++ ++ V E+D P P +D
Sbjct: 251 NPSKRGTLEQIMKDRWMNVGHEDDELKPYVAPLPDYKD 288
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A+ N +K+ DFG S T +L+ F G+ Y APE+F K G VD
Sbjct: 143 NLLLDADMN-IKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQ--GKKYDGPEVD 195
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WSLG +L + SG G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 12/257 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F K + + +T E+ A K + + M +E+ I + +++V ++G
Sbjct: 48 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 107
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +ELC +L L L E R Y +Q+V LH N ++HRD+K
Sbjct: 108 FEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGR 189
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH
Sbjct: 167 LGNLFLN-EDLEVKIGDFGLATKVEYD----GERKKVLCGTPNYIAPEVL---SKKGHSF 218
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WS+GC++ + GK P+ E + ++ E +IP+ ++ + + L+
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQT 276
Query: 250 DPAQRATIFELLQHPFL 266
DP R TI ELL F
Sbjct: 277 DPTARPTINELLNDEFF 293
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAV 368
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH V
Sbjct: 169 NLFLN-EDLEVKIGDFGLATKVEYD----GERKKVLCGTPNYIAPEVL---SKKGHSFEV 220
Query: 369 DIWSLGCVLVEMSSGK 384
D+WS+GC++ + GK
Sbjct: 221 DVWSIGCIMYTLLVGK 236
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 12/257 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F K + + +T E+ A K + + M +E+ I + +++V ++G
Sbjct: 30 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 89
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +ELC +L L L E R Y +Q+V LH N ++HRD+K
Sbjct: 90 FEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGR 189
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH
Sbjct: 149 LGNLFLN-EDLEVKIGDFGLATKVEYD----GERKKTLCGTPNYIAPEVL---SKKGHSF 200
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WS+GC++ + GK P+ E + ++ E +IP+ ++ + + L+
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQT 258
Query: 250 DPAQRATIFELLQHPFL 266
DP R TI ELL F
Sbjct: 259 DPTARPTINELLNDEFF 275
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAV 368
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH V
Sbjct: 151 NLFLN-EDLEVKIGDFGLATKVEYD----GERKKTLCGTPNYIAPEVL---SKKGHSFEV 202
Query: 369 DIWSLGCVLVEMSSGK 384
D+WS+GC++ + GK
Sbjct: 203 DVWSIGCIMYTLLVGK 218
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 127/254 (50%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G G+V AVN T E VA+K + + + D +++ E+ I + +N +N+VK+YG
Sbjct: 15 GEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDC--PENIKKEICINKMLNHENVVKFYG- 71
Query: 71 EIHREE---MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
HR E LF+E C+ G L ++ + G+PE +R+ QL+ + LH I HR
Sbjct: 72 --HRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR 128
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ L E ++LK+ DFG A + + LN GT Y+APE+ + H
Sbjct: 129 DIKPENLLLD-ERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFH 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ-AFAELC 246
VD+WS G VL M +G+ PW + + Q +T P D A
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 244
Query: 247 LRHDPAQRATIFEL 260
L +P+ R TI ++
Sbjct: 245 LVENPSARITIPDI 258
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++LK+ DFG A + + LN GT Y+APE+ + H VD+W
Sbjct: 135 LLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELL--KRREFHAEPVDVW 191
Query: 372 SLGCVLVEMSSGK 384
S G VL M +G+
Sbjct: 192 SCGIVLTAMLAGE 204
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 12/257 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F K + + +T E+ A K + + M +E+ I + +++V ++G
Sbjct: 26 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +ELC +L L L E R Y +Q+V LH N ++HRD+K
Sbjct: 86 FEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGR 189
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH
Sbjct: 145 LGNLFLN-EDLEVKIGDFGLATKVEYD----GERKKTLCGTPNYIAPEVL---SKKGHSF 196
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WS+GC++ + GK P+ E + ++ E +IP+ ++ + + L+
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQT 254
Query: 250 DPAQRATIFELLQHPFL 266
DP R TI ELL F
Sbjct: 255 DPTARPTINELLNDEFF 271
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAV 368
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH V
Sbjct: 147 NLFLN-EDLEVKIGDFGLATKVEYD----GERKKTLCGTPNYIAPEVL---SKKGHSFEV 198
Query: 369 DIWSLGCVLVEMSSGK 384
D+WS+GC++ + GK
Sbjct: 199 DVWSIGCIMYTLLVGK 214
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 12/257 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F K + + +T E+ A K + + M +E+ I + +++V ++G
Sbjct: 50 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +ELC +L L L E R Y +Q+V LH N ++HRD+K
Sbjct: 110 FEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGR 189
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH
Sbjct: 169 LGNLFLN-EDLEVKIGDFGLATKVEYD----GERKKVLCGTPNYIAPEVL---SKKGHSF 220
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WS+GC++ + GK P+ E + ++ E +IP+ ++ + + L+
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQT 278
Query: 250 DPAQRATIFELLQHPFL 266
DP R TI ELL F
Sbjct: 279 DPTARPTINELLNDEFF 295
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAV 368
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH V
Sbjct: 171 NLFLN-EDLEVKIGDFGLATKVEYD----GERKKVLCGTPNYIAPEVL---SKKGHSFEV 222
Query: 369 DIWSLGCVLVEMSSGK 384
D+WS+GC++ + GK
Sbjct: 223 DVWSIGCIMYTLLVGK 238
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 12/257 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F K + + +T E+ A K + + M +E+ I + +++V ++G
Sbjct: 26 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +ELC +L L L E R Y +Q+V LH N ++HRD+K
Sbjct: 86 FEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGR 189
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH
Sbjct: 145 LGNLFLN-EDLEVKIGDFGLATKVEYD----GERKKTLCGTPNYIAPEVL---SKKGHSF 196
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WS+GC++ + GK P+ E + ++ E +IP+ ++ + + L+
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQT 254
Query: 250 DPAQRATIFELLQHPFL 266
DP R TI ELL F
Sbjct: 255 DPTARPTINELLNDEFF 271
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAV 368
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH V
Sbjct: 147 NLFLN-EDLEVKIGDFGLATKVEYD----GERKKTLCGTPNYIAPEVL---SKKGHSFEV 198
Query: 369 DIWSLGCVLVEMSSGK 384
D+WS+GC++ + GK
Sbjct: 199 DVWSIGCIMYTLLVGK 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 12/257 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F K + + +T E+ A K + + M +E+ I + +++V ++G
Sbjct: 24 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 83
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +ELC +L L L E R Y +Q+V LH N ++HRD+K
Sbjct: 84 FEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGR 189
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH
Sbjct: 143 LGNLFLN-EDLEVKIGDFGLATKVEYD----GERKKVLCGTPNYIAPEVL---SKKGHSF 194
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WS+GC++ + GK P+ E + ++ E +IP+ ++ + + L+
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPF-ETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQT 252
Query: 250 DPAQRATIFELLQHPFL 266
DP R TI ELL F
Sbjct: 253 DPTARPTINELLNDEFF 269
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAV 368
N+FL E +K+GDFG A K+ GE GT Y+APEV +K GH V
Sbjct: 145 NLFLN-EDLEVKIGDFGLATKVEYD----GERKKVLCGTPNYIAPEVL---SKKGHSFEV 196
Query: 369 DIWSLGCVLVEMSSGK 384
D+WS+GC++ + GK
Sbjct: 197 DVWSIGCIMYTLLVGK 212
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 13/278 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F KV A + TG+ VA+K I + N + K + E+RI++ +N N+VK + V
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEV 81
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + L ME + G + LV + E R +Q+V A+ H+ IVHRD+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K+ N+ L A+ N +K+ DFG S T +L+ F G Y APE+F K G
Sbjct: 140 KAENLLLDADMN-IKIADFG----FSNEFTFGNKLDAFCGAPPYAAPELF--QGKKYDGP 192
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WSLG +L + SG P+ N + + + + IP +S + + + L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 250
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQD 287
+P++R T+ ++++ ++ V E+D P P +D
Sbjct: 251 NPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKD 288
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A+ N +K+ DFG S T +L+ F G Y APE+F K G VD
Sbjct: 143 NLLLDADMN-IKIADFG----FSNEFTFGNKLDAFCGAPPYAAPELF--QGKKYDGPEVD 195
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WSLG +L + SG G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F KV A + TG+ VA+K I + N + K + E+RI++ +N N+VK + V
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEV 81
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + L ME + G + LV + E R +Q+V A+ H+ IVHRD+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K+ N+ L A+ N +K+ DFG S T +L+ F G+ Y APE+F K G
Sbjct: 140 KAENLLLDADMN-IKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELF--QGKKYDGP 192
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WSLG +L + SG P+ N + + + + IP +S + + + L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 250
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQD 287
+P++R T+ ++++ ++ V E+D P P +D
Sbjct: 251 NPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKD 288
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A+ N +K+ DFG S T +L+ F G+ Y APE+F K G VD
Sbjct: 143 NLLLDADMN-IKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQ--GKKYDGPEVD 195
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WSLG +L + SG G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 127/257 (49%), Gaps = 11/257 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F VY A + TG VA+K I A V+ + E++I + ++++ Y
Sbjct: 20 GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E+C G + +++ E R + Q++ + LH + I+HRD+
Sbjct: 80 FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLT 139
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGR 189
+N+ LT N +K+ DFG A ++ +P E + GT Y++PE+ + HG
Sbjct: 140 LSNLLLTRNMN-IKIADFGLATQLK----MPHEKHYTLCGTPNYISPEI---ATRSAHGL 191
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
D+WSLGC+ + G+ P+ + D+ + KV + + +P LS E + LR
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPF-DTDTVKNTLNKVVLADY-EMPSFLSIEAKDLIHQLLRR 249
Query: 250 DPAQRATIFELLQHPFL 266
+PA R ++ +L HPF+
Sbjct: 250 NPADRLSLSSVLDHPFM 266
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRA 367
+N+ LT N +K+ DFG A ++ +P E + GT Y++PE+ + HG
Sbjct: 141 SNLLLTRNMN-IKIADFGLATQLK----MPHEKHYTLCGTPNYISPEI---ATRSAHGLE 192
Query: 368 VDIWSLGCVLVEMSSGK 384
D+WSLGC+ + G+
Sbjct: 193 SDVWSLGCMFYTLLIGR 209
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 10/256 (3%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F K Y + +T E+ A K + + M E+ I + ++ ++V ++G
Sbjct: 35 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 94
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +E+C +L L + E R + +Q + + LH N ++HRD+K
Sbjct: 95 FEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLK 153
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+FL + + +K+GDFG A KI +L GT Y+APEV K GH
Sbjct: 154 LGNLFLNDDMD-VKIGDFGLATKIEFDGERKKDL---CGTPNYIAPEVLC---KKGHSFE 206
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VDIWSLGC+L + GK P+ E + ++ E ++P ++ A L D
Sbjct: 207 VDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKNEY-SVPRHINPVASALIRRMLHAD 264
Query: 251 PAQRATIFELLQHPFL 266
P R ++ ELL F
Sbjct: 265 PTLRPSVAELLTDEFF 280
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+FL + + +K+GDFG A KI +L GT Y+APEV K GH VD
Sbjct: 156 NLFLNDDMD-VKIGDFGLATKIEFDGERKKDL---CGTPNYIAPEVLC---KKGHSFEVD 208
Query: 370 IWSLGCVLVEMSSGK 384
IWSLGC+L + GK
Sbjct: 209 IWSLGCILYTLLVGK 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 10/256 (3%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F K Y + +T E+ A K + + M E+ I + ++ ++V ++G
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +E+C +L L + E R + +Q + + LH N ++HRD+K
Sbjct: 111 FEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+FL + + +K+GDFG A KI +L GT Y+APEV K GH
Sbjct: 170 LGNLFLNDDMD-VKIGDFGLATKIEFDGERKKDL---CGTPNYIAPEVLC---KKGHSFE 222
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VDIWSLGC+L + GK P+ E + ++ E ++P ++ A L D
Sbjct: 223 VDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKNEY-SVPRHINPVASALIRRMLHAD 280
Query: 251 PAQRATIFELLQHPFL 266
P R ++ ELL F
Sbjct: 281 PTLRPSVAELLTDEFF 296
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+FL + + +K+GDFG A KI +L GT Y+APEV K GH VD
Sbjct: 172 NLFLNDDMD-VKIGDFGLATKIEFDGERKKDL---CGTPNYIAPEVLC---KKGHSFEVD 224
Query: 370 IWSLGCVLVEMSSGK 384
IWSLGC+L + GK
Sbjct: 225 IWSLGCILYTLLVGK 239
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F KV A + TG+ VA+K I + N + K + E+RI++ +N N+VK + V
Sbjct: 16 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEV 74
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + L ME + G + LV + E R +Q+V A+ H+ IVHRD+
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLV--AHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDL 132
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K+ N+ L A+ N +K+ DFG S T +L+ F G+ Y APE+F K G
Sbjct: 133 KAENLLLDADMN-IKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELF--QGKKYDGP 185
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WSLG +L + SG P+ N + + + + IP +S + + + L
Sbjct: 186 EVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 243
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQD 287
+P++R T+ ++++ ++ V E+D P P +D
Sbjct: 244 NPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKD 281
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A+ N +K+ DFG S T +L+ F G+ Y APE+F K G VD
Sbjct: 136 NLLLDADMN-IKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELF--QGKKYDGPEVD 188
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WSLG +L + SG G
Sbjct: 189 VWSLGVILYTLVSGSLPFDG 208
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 20/261 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F K Y + +T E+ A K + + M E+ I + ++ ++V ++G
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +E+C +L L + E R + +Q + + LH N ++HRD+K
Sbjct: 111 FEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-----FVGTQAYMAPEVFMDTNKV 185
N+FL + + +K+GDFG A KI E +G GT Y+APEV K
Sbjct: 170 LGNLFLNDDMD-VKIGDFGLATKI--------EFDGERKKTLCGTPNYIAPEVLC---KK 217
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
GH VDIWSLGC+L + GK P+ E + ++ E ++P ++ A
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKNEY-SVPRHINPVASALIRR 275
Query: 246 CLRHDPAQRATIFELLQHPFL 266
L DP R ++ ELL F
Sbjct: 276 MLHADPTLRPSVAELLTDEFF 296
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 17/80 (21%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-----FVGTQAYMAPEVFMDTNKVGH 364
N+FL + + +K+GDFG A KI E +G GT Y+APEV K GH
Sbjct: 172 NLFLNDDMD-VKIGDFGLATKI--------EFDGERKKTLCGTPNYIAPEVLC---KKGH 219
Query: 365 GRAVDIWSLGCVLVEMSSGK 384
VDIWSLGC+L + GK
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 20/261 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F K Y + +T E+ A K + + M E+ I + ++ ++V ++G
Sbjct: 51 GKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGF 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + +E+C +L L + E R + +Q + + LH N ++HRD+K
Sbjct: 111 FEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-----FVGTQAYMAPEVFMDTNKV 185
N+FL + + +K+GDFG A KI E +G GT Y+APEV K
Sbjct: 170 LGNLFLNDDMD-VKIGDFGLATKI--------EFDGERKKXLCGTPNYIAPEVLC---KK 217
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
GH VDIWSLGC+L + GK P+ E + ++ E ++P ++ A
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKNEY-SVPRHINPVASALIRR 275
Query: 246 CLRHDPAQRATIFELLQHPFL 266
L DP R ++ ELL F
Sbjct: 276 MLHADPTLRPSVAELLTDEFF 296
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 17/80 (21%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-----FVGTQAYMAPEVFMDTNKVGH 364
N+FL + + +K+GDFG A KI E +G GT Y+APEV K GH
Sbjct: 172 NLFLNDDMD-VKIGDFGLATKI--------EFDGERKKXLCGTPNYIAPEVLC---KKGH 219
Query: 365 GRAVDIWSLGCVLVEMSSGK 384
VDIWSLGC+L + GK
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 26/259 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG V A + VA+K+I+ + A +VELR L +N N+VK YG
Sbjct: 18 GRGAFGVVCKA--KWRAKDVAIKQIESESERKA-----FIVELRQLSRVNHPNIVKLYGA 70
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRR---YTKQLVDAISALHE---NTI 124
++ + L ME G+L +++ E LP + Q ++ LH +
Sbjct: 71 CLN--PVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
+HRD+K N+ L A G LK+ DFG+A I H T G+ A+MAPEVF +N
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT------NNKGSAAWMAPEVFEGSN- 180
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEY-DSNYQIMFKVGMGETPTIPESLSDEGQAFA 243
+ D++S G +L E+ + ++P+ E ++IM+ V G P + ++L ++
Sbjct: 181 --YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 238
Query: 244 ELCLRHDPAQRATIFELLQ 262
C DP+QR ++ E+++
Sbjct: 239 TRCWSKDPSQRPSMEEIVK 257
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A G LK+ DFG+A I H T G+ A+MAPEVF +N + D
Sbjct: 136 NLLLVAGGTVLKICDFGTACDIQTHMT------NNKGSAAWMAPEVFEGSN---YSEKCD 186
Query: 370 IWSLGCVLVEM 380
++S G +L E+
Sbjct: 187 VFSWGIILWEV 197
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 141/275 (51%), Gaps = 23/275 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V+ + +G ++A K I L + R ++ EL++L N +V +YG
Sbjct: 15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR--NQIIRELQVLHECNSPYIVGFYGA 72
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVHRDI 129
E+ + ME G+L+ +++ +PE ++ + + ++ ++ L E + I+HRD+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K +NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 132 KPSNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSV 182
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSN---------YQIMFKVGMGETPTIPESL-SDEG 239
DIWS+G LVEM+ G+ P D+ ++++ + P +P + S E
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 242
Query: 240 QAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDV 274
Q F CL +PA+RA + +L+ H F+ S E+V
Sbjct: 243 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 277
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 134 SNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSVQS 184
Query: 369 DIWSLGCVLVEMSSGK 384
DIWS+G LVEM+ G+
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 26/259 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG V A + VA+K+I+ + A +VELR L +N N+VK YG
Sbjct: 17 GRGAFGVVCKA--KWRAKDVAIKQIESESERKA-----FIVELRQLSRVNHPNIVKLYGA 69
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRR---YTKQLVDAISALHE---NTI 124
++ + L ME G+L +++ E LP + Q ++ LH +
Sbjct: 70 CLN--PVCLVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
+HRD+K N+ L A G LK+ DFG+A I H T G+ A+MAPEVF +N
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT------NNKGSAAWMAPEVFEGSN- 179
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEY-DSNYQIMFKVGMGETPTIPESLSDEGQAFA 243
+ D++S G +L E+ + ++P+ E ++IM+ V G P + ++L ++
Sbjct: 180 --YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 237
Query: 244 ELCLRHDPAQRATIFELLQ 262
C DP+QR ++ E+++
Sbjct: 238 TRCWSKDPSQRPSMEEIVK 256
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A G LK+ DFG+A I H T G+ A+MAPEVF +N + D
Sbjct: 135 NLLLVAGGTVLKICDFGTACDIQTHMT------NNKGSAAWMAPEVFEGSN---YSEKCD 185
Query: 370 IWSLGCVLVEM 380
++S G +L E+
Sbjct: 186 VFSWGIILWEV 196
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F KV A + TG+ VA++ I + N + K + E+RI++ +N N+VK + V
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEV 81
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + L ME + G + LV + E R +Q+V A+ H+ IVHRD+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K+ N+ L A+ N +K+ DFG S T +L+ F G+ Y APE+F K G
Sbjct: 140 KAENLLLDADMN-IKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELF--QGKKYDGP 192
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WSLG +L + SG P+ N + + + + IP +S + + + L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 250
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQD 287
+P++R T+ ++++ ++ V E+D P P +D
Sbjct: 251 NPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKD 288
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A+ N +K+ DFG S T +L+ F G+ Y APE+F K G VD
Sbjct: 143 NLLLDADMN-IKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQ--GKKYDGPEVD 195
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WSLG +L + SG G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 137/273 (50%), Gaps = 32/273 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHK--QNDARFVKDMLVELRILEGINQKNLVKYY 68
G+G F V +N ETG+ A+K + + K + +D+ E I + ++V+
Sbjct: 35 GKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL- 93
Query: 69 GVEIHREEMVLFM--------ELCTEGTLESLVQSTEDGL--PEVLVRRYTKQLVDAISA 118
+E + + +L+M +LC E +V+ + G E + Y +Q+++A+
Sbjct: 94 -LETYSSDGMLYMVFEFMDGADLCFE-----IVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
H+N I+HRD+K + L ++ NS +KLG FG A+++ V G G VGT +MAP
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG---GRVGTPHFMAP 204
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLS 236
EV + +G+ VD+W G +L + SG P+ Y + ++ + G+ P S
Sbjct: 205 EV---VKREPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNPRQWS 259
Query: 237 DEGQAFAELCLRH---DPAQRATIFELLQHPFL 266
++ +L R DPA+R T++E L HP+L
Sbjct: 260 HISESAKDLVRRMLMLDPAERITVYEALNHPWL 292
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 311 IFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+ L ++ NS +KLG FG A+++ V G G VGT +MAPEV + +G+ V
Sbjct: 163 VLLASKENSAPVKLGGFGVAIQLGESGLVAG---GRVGTPHFMAPEV---VKREPYGKPV 216
Query: 369 DIWSLGCVLVEMSSG 383
D+W G +L + SG
Sbjct: 217 DVWGCGVILFILLSG 231
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 24/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGIN 60
+ F + G+G F VY ++ ET VA E+Q L K RF + E L+G+
Sbjct: 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE----EAEXLKGLQ 83
Query: 61 QKNLVKYY----GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAI 116
N+V++Y ++ +VL EL T GTL++ ++ + +VL R + +Q++ +
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVL-RSWCRQILKGL 142
Query: 117 SALHENT--IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYM 174
LH T I+HRD+K NIF+T S+K+GD G A A +GT +
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA-----KAVIGTPEFX 197
Query: 175 APEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPES 234
APE + + + +VD+++ G +E ++ + P++E + QI +V G P +
Sbjct: 198 APEXYEEK----YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDK 253
Query: 235 LS-DEGQAFAELCLRHDPAQRATIFELLQHPFL 266
++ E + E C+R + +R +I +LL H F
Sbjct: 254 VAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 278 RSVPASVLQDYLKLGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFGSAVKISAHTTV 337
RS +L+ L PP+ +K NIF+T S+K+GD G A A
Sbjct: 132 RSWCRQILKGLQFLHTRTPPIIHRDLKC---DNIFITGPTGSVKIGDLGLATLKRASFA- 187
Query: 338 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKTNLSGVVVSAEVF 397
+GT + APE + + + +VD+++ G +E ++ + S +A+++
Sbjct: 188 ----KAVIGTPEFXAPEXYEEK----YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIY 239
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F KV A + TG+ VA++ I + N + K + E+RI++ +N N+VK + V
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEV 81
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + L ME + G + LV + E R +Q+V A+ H+ IVHRD+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K+ N+ L A+ N +K+ DFG S T +L+ F G+ Y APE+F K G
Sbjct: 140 KAENLLLDADMN-IKIADFG----FSNEFTFGNKLDEFCGSPPYAAPELF--QGKKYDGP 192
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WSLG +L + SG P+ N + + + + IP +S + + + L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 250
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQD 287
+P++R T+ ++++ ++ V E+D P P +D
Sbjct: 251 NPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKD 288
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A+ N +K+ DFG S T +L+ F G+ Y APE+F K G VD
Sbjct: 143 NLLLDADMN-IKIADFG----FSNEFTFGNKLDEFCGSPPYAAPELFQ--GKKYDGPEVD 195
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WSLG +L + SG G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 137/273 (50%), Gaps = 32/273 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHK--QNDARFVKDMLVELRILEGINQKNLVKYY 68
G+G F V +N ETG+ A+K + + K + +D+ E I + ++V+
Sbjct: 33 GKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL- 91
Query: 69 GVEIHREEMVLFM--------ELCTEGTLESLVQSTEDGL--PEVLVRRYTKQLVDAISA 118
+E + + +L+M +LC E +V+ + G E + Y +Q+++A+
Sbjct: 92 -LETYSSDGMLYMVFEFMDGADLCFE-----IVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
H+N I+HRD+K + L ++ NS +KLG FG A+++ V G G VGT +MAP
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG---GRVGTPHFMAP 202
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLS 236
EV + +G+ VD+W G +L + SG P+ Y + ++ + G+ P S
Sbjct: 203 EV---VKREPYGKPVDVWGCGVILFILLSGCLPF--YGTKERLFEGIIKGKYKMNPRQWS 257
Query: 237 DEGQAFAELCLRH---DPAQRATIFELLQHPFL 266
++ +L R DPA+R T++E L HP+L
Sbjct: 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 311 IFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+ L ++ NS +KLG FG A+++ V G G VGT +MAPEV + +G+ V
Sbjct: 161 VLLASKENSAPVKLGGFGVAIQLGESGLVAG---GRVGTPHFMAPEV---VKREPYGKPV 214
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+W G +L + SG G
Sbjct: 215 DVWGCGVILFILLSGCLPFYG 235
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 48/289 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A NN GE A+K+I+L K+++ + E+ IL+ + N+VK Y V
Sbjct: 11 GEGTYGVVYKAQNN-YGETFALKKIRLEKEDEG-IPSTTIREISILKELKHSNIVKLYDV 68
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++ +VL E + L+ L+ E GL V + + QL++ I+ H+ ++HRD+K
Sbjct: 69 IHTKKRLVLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 131 SANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
N+ + EG LK+ DFG A V+ H V T Y AP+V M + K
Sbjct: 128 PQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVV---------TLWYRAPDVLMGSKK 177
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIP--------- 232
+ +DIWS+GC+ EM +G + +E D +I +G + P
Sbjct: 178 --YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 233 ---------------ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ L + G L+ DP QR T + L+H +
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG LK+ DFG A V+ H V T Y AP+V M + K
Sbjct: 130 NLLINREG-ELKIADFGLARAFGIPVRKYTHEVV---------TLWYRAPDVLMGSKK-- 177
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSGV 390
+ +DIWS+GC+ EM +G GV
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGV 204
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 140/266 (52%), Gaps = 15/266 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V+ + +G ++A K I L + R ++ EL++L N +V +YG
Sbjct: 18 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR--NQIIRELQVLHECNSPYIVGFYGA 75
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVHRDI 129
E+ + ME G+L+ +++ +PE ++ + + ++ ++ L E + I+HRD+
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K +NI + + G +KL DFG + ++ N FVGT++YM+PE T+ +
Sbjct: 135 KPSNILVNSRGE-IKLCDFGVSGQLIDEMA-----NEFVGTRSYMSPERLQGTH---YSV 185
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESL-SDEGQAFAELCLR 248
DIWS+G LVEM+ G+ P + ++++ + P +P ++ S E Q F CL
Sbjct: 186 QSDIWSMGLSLVEMAVGRYPRPPM-AIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLI 244
Query: 249 HDPAQRATIFELLQHPFLIVSCEEDV 274
+PA+RA + +L+ H F+ S E+V
Sbjct: 245 KNPAERADLKQLMVHAFIKRSDAEEV 270
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + + G +KL DFG + ++ N FVGT++YM+PE T+ +
Sbjct: 137 SNILVNSRGE-IKLCDFGVSGQLIDEMA-----NEFVGTRSYMSPERLQGTH---YSVQS 187
Query: 369 DIWSLGCVLVEMSSGK 384
DIWS+G LVEM+ G+
Sbjct: 188 DIWSMGLSLVEMAVGR 203
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 48/289 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A NN GE A+K+I+L K+++ + E+ IL+ + N+VK Y V
Sbjct: 11 GEGTYGVVYKAQNN-YGETFALKKIRLEKEDEG-IPSTTIREISILKELKHSNIVKLYDV 68
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++ +VL E + L+ L+ E GL V + + QL++ I+ H+ ++HRD+K
Sbjct: 69 IHTKKRLVLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 131 SANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
N+ + EG LK+ DFG A V+ H V T Y AP+V M + K
Sbjct: 128 PQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVV---------TLWYRAPDVLMGSKK 177
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIP--------- 232
+ +DIWS+GC+ EM +G + +E D +I +G + P
Sbjct: 178 --YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 233 ---------------ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ L + G L+ DP QR T + L+H +
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG LK+ DFG A V+ H V T Y AP+V M + K
Sbjct: 130 NLLINREG-ELKIADFGLARAFGIPVRKYTHEVV---------TLWYRAPDVLMGSKK-- 177
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSGV 390
+ +DIWS+GC+ EM +G GV
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGV 204
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 48/289 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A NN GE A+K+I+L K+++ + E+ IL+ + N+VK Y V
Sbjct: 11 GEGTYGVVYKAQNN-YGETFALKKIRLEKEDEG-IPSTTIREISILKELKHSNIVKLYDV 68
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++ +VL E + L+ L+ E GL V + + QL++ I+ H+ ++HRD+K
Sbjct: 69 IHTKKRLVLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 131 SANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
N+ + EG LK+ DFG A V+ H V T Y AP+V M + K
Sbjct: 128 PQNLLINREG-ELKIADFGLARAFGIPVRKYTHEIV---------TLWYRAPDVLMGSKK 177
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIP--------- 232
+ +DIWS+GC+ EM +G + +E D +I +G + P
Sbjct: 178 --YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 233 ---------------ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ L + G L+ DP QR T + L+H +
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + EG LK+ DFG A V+ H V T Y AP+V M + K
Sbjct: 130 NLLINREG-ELKIADFGLARAFGIPVRKYTHEIV---------TLWYRAPDVLMGSKK-- 177
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSGV 390
+ +DIWS+GC+ EM +G GV
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGV 204
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 140/269 (52%), Gaps = 17/269 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V+ + +G ++A K I L + R ++ EL++L N +V +YG
Sbjct: 34 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR--NQIIRELQVLHECNSPYIVGFYGA 91
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVHRDI 129
E+ + ME G+L+ +++ +PE ++ + + ++ ++ L E + I+HRD+
Sbjct: 92 FYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 150
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K +NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 151 KPSNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSV 201
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSN---YQIMFKVGMGETPTIPESL-SDEGQAFAEL 245
DIWS+G LVEM+ G+ P + ++++ + P +P + S E Q F
Sbjct: 202 QSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNK 261
Query: 246 CLRHDPAQRATIFELLQHPFLIVSCEEDV 274
CL +PA+RA + +L+ H F+ S E+V
Sbjct: 262 CLIKNPAERADLKQLMVHAFIKRSDAEEV 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 153 SNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSVQS 203
Query: 369 DIWSLGCVLVEMSSGK 384
DIWS+G LVEM+ G+
Sbjct: 204 DIWSMGLSLVEMAVGR 219
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 38/277 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN--LVKYY 68
G G KV+ +N E ++ A+K + L ++ D + + E+ L + Q + +++ Y
Sbjct: 21 GSGGSSKVFQVLN-EKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
EI + + + ME C L S ++ + P + Y K +++A+ +H++ IVH D
Sbjct: 79 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSD 136
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K AN FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 137 LKPAN-FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSREN 193
Query: 189 --------RAVDIWSLGCVLVEMSSGKRPWAE-----------YDSNYQIMFKVGMGETP 229
D+WSLGC+L M+ GK P+ + D N++I F P
Sbjct: 194 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-------P 246
Query: 230 TIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
IPE + Q + CL+ DP QR +I ELL HP++
Sbjct: 247 DIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 280
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG------ 365
FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 142 FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSRENGKSKSK 199
Query: 366 --RAVDIWSLGCVLVEMSSGKTNLSGVV 391
D+WSLGC+L M+ GKT ++
Sbjct: 200 ISPKSDVWSLGCILYYMTYGKTPFQQII 227
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 38/279 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN--LVKYY 68
G G KV+ +N E ++ A+K + L ++ D + + E+ L + Q + +++ Y
Sbjct: 65 GSGGSSKVFQVLN-EKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
EI + + + ME C L S ++ + P + Y K +++A+ +H++ IVH D
Sbjct: 123 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSD 180
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K AN FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 181 LKPAN-FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSREN 237
Query: 189 --------RAVDIWSLGCVLVEMSSGKRPWAE-----------YDSNYQIMFKVGMGETP 229
D+WSLGC+L M+ GK P+ + D N++I F P
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-------P 290
Query: 230 TIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
IPE + Q + CL+ DP QR +I ELL HP++ +
Sbjct: 291 DIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG------ 365
FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 186 FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 366 --RAVDIWSLGCVLVEMSSGKTNLSGVV 391
D+WSLGC+L M+ GKT ++
Sbjct: 244 ISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 38/277 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN--LVKYY 68
G G KV+ +N E ++ A+K + L ++ D + + E+ L + Q + +++ Y
Sbjct: 17 GSGGSSKVFQVLN-EKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
EI + + + ME C L S ++ + P + Y K +++A+ +H++ IVH D
Sbjct: 75 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSD 132
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K AN FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 133 LKPAN-FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSREN 189
Query: 189 --------RAVDIWSLGCVLVEMSSGKRPWAE-----------YDSNYQIMFKVGMGETP 229
D+WSLGC+L M+ GK P+ + D N++I F P
Sbjct: 190 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-------P 242
Query: 230 TIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
IPE + Q + CL+ DP QR +I ELL HP++
Sbjct: 243 DIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG------ 365
FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 138 FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSRENGKSKSK 195
Query: 366 --RAVDIWSLGCVLVEMSSGKTNLSGVV 391
D+WSLGC+L M+ GKT ++
Sbjct: 196 ISPKSDVWSLGCILYYMTYGKTPFQQII 223
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 38/279 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN--LVKYY 68
G G KV+ +N E ++ A+K + L ++ D + + E+ L + Q + +++ Y
Sbjct: 18 GSGGSSKVFQVLN-EKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
EI + + + ME C L S ++ + P + Y K +++A+ +H++ IVH D
Sbjct: 76 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSD 133
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K AN FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 134 LKPAN-FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSREN 190
Query: 189 --------RAVDIWSLGCVLVEMSSGKRPWAE-----------YDSNYQIMFKVGMGETP 229
D+WSLGC+L M+ GK P+ + D N++I F P
Sbjct: 191 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-------P 243
Query: 230 TIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
IPE + Q + CL+ DP QR +I ELL HP++ +
Sbjct: 244 DIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG------ 365
FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 139 FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSRENGKSKSK 196
Query: 366 --RAVDIWSLGCVLVEMSSGKTNLSGVV 391
D+WSLGC+L M+ GKT ++
Sbjct: 197 ISPKSDVWSLGCILYYMTYGKTPFQQII 224
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 38/277 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN--LVKYY 68
G G KV+ +N E ++ A+K + L ++ D + + E+ L + Q + +++ Y
Sbjct: 37 GSGGSSKVFQVLN-EKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
EI + + + ME C L S ++ + P + Y K +++A+ +H++ IVH D
Sbjct: 95 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSD 152
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K AN FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 153 LKPAN-FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSREN 209
Query: 189 --------RAVDIWSLGCVLVEMSSGKRPWAE-----------YDSNYQIMFKVGMGETP 229
D+WSLGC+L M+ GK P+ + D N++I F P
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-------P 262
Query: 230 TIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
IPE + Q + CL+ DP QR +I ELL HP++
Sbjct: 263 DIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 296
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG------ 365
FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 158 FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 366 --RAVDIWSLGCVLVEMSSGKTNLSGVV 391
D+WSLGC+L M+ GKT ++
Sbjct: 216 ISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 38/279 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN--LVKYY 68
G G KV+ +N E ++ A+K + L ++ D + + E+ L + Q + +++ Y
Sbjct: 65 GSGGSSKVFQVLN-EKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
EI + + + ME C L S ++ + P + Y K +++A+ +H++ IVH D
Sbjct: 123 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSD 180
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K AN FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 181 LKPAN-FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSREN 237
Query: 189 --------RAVDIWSLGCVLVEMSSGKRPWAE-----------YDSNYQIMFKVGMGETP 229
D+WSLGC+L M+ GK P+ + D N++I F P
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-------P 290
Query: 230 TIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
IPE + Q + CL+ DP QR +I ELL HP++ +
Sbjct: 291 DIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG------ 365
FL +G LKL DFG A ++ TT + + VGT YM PE D +
Sbjct: 186 FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGTVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 366 --RAVDIWSLGCVLVEMSSGKTNLSGVV 391
D+WSLGC+L M+ GKT ++
Sbjct: 244 ISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 142/286 (49%), Gaps = 13/286 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F KV A + TG VA+K I + N K + E+RI++ +N N+VK + V
Sbjct: 24 GKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQK-LFREVRIMKILNHPNIVKLFEV 82
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + L ME + G + LV + E R +Q+V A+ H+ IVHRD+
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKYIVHRDL 140
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K+ N+ L + N +K+ DFG S TV +L+ F G+ Y APE+F K G
Sbjct: 141 KAENLLLDGDMN-IKIADFG----FSNEFTVGNKLDTFCGSPPYAAPELFQ--GKKYDGP 193
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WSLG +L + SG P+ N + + + + IP +S + + + L
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLVL 251
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGIVL 295
+P +R ++ ++++ ++ V EE+ P + P D ++ I++
Sbjct: 252 NPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFNDTKRIDIMV 297
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + N +K+ DFG S TV +L+ F G+ Y APE+F K G VD
Sbjct: 144 NLLLDGDMN-IKIADFG----FSNEFTVGNKLDTFCGSPPYAAPELFQ--GKKYDGPEVD 196
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WSLG +L + SG G
Sbjct: 197 VWSLGVILYTLVSGSLPFDG 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 135/263 (51%), Gaps = 15/263 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ--LHKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G+G +G V + +G+++A+K I+ ++ Q R + D+ + +R ++ V +Y
Sbjct: 16 GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT---VDCPFTVTFY 72
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDG--LPEVLVRRYTKQLVDAISALHEN-TIV 125
G ++ + MEL + Q + G +PE ++ + +V A+ LH +++
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 132
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE-VFMDTNK 184
HRD+K +N+ + A G +K+ DFG IS + + G + YMAPE + + N+
Sbjct: 133 HRDVKPSNVLINALGQ-VKMCDFG----ISGYLVDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIP-ESLSDEGQAFA 243
G+ DIWSLG ++E++ + P+ + + +Q + +V +P +P + S E F
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 247
Query: 244 ELCLRHDPAQRATIFELLQHPFL 266
CL+ + +R T EL+QHPF
Sbjct: 248 SQCLKKNSKERPTYPELMQHPFF 270
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE-VFMDTNKVGHGRA 367
+N+ + A G +K+ DFG IS + + G + YMAPE + + N+ G+
Sbjct: 139 SNVLINALGQ-VKMCDFG----ISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVK 193
Query: 368 VDIWSLGCVLVEMS 381
DIWSLG ++E++
Sbjct: 194 SDIWSLGITMIELA 207
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 135/265 (50%), Gaps = 15/265 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ--LHKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G+G +G V + +G+++A+K I+ ++ Q R + D+ + +R ++ V +Y
Sbjct: 60 GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT---VDCPFTVTFY 116
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDG--LPEVLVRRYTKQLVDAISALHEN-TIV 125
G ++ + MEL + Q + G +PE ++ + +V A+ LH +++
Sbjct: 117 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 176
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE-VFMDTNK 184
HRD+K +N+ + A G +K+ DFG IS + G + YMAPE + + N+
Sbjct: 177 HRDVKPSNVLINALGQ-VKMCDFG----ISGYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIP-ESLSDEGQAFA 243
G+ DIWSLG ++E++ + P+ + + +Q + +V +P +P + S E F
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 291
Query: 244 ELCLRHDPAQRATIFELLQHPFLIV 268
CL+ + +R T EL+QHPF +
Sbjct: 292 SQCLKKNSKERPTYPELMQHPFFTL 316
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE-VFMDTNKVGHGRA 367
+N+ + A G +K+ DFG IS + G + YMAPE + + N+ G+
Sbjct: 183 SNVLINALGQ-VKMCDFG----ISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVK 237
Query: 368 VDIWSLGCVLVEMS 381
DIWSLG ++E++
Sbjct: 238 SDIWSLGITMIELA 251
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 24/266 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V L E R+L+ L Y
Sbjct: 18 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS 77
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH-ENTIVHRD 128
+ H + + ME G L S E E R Y ++V A+ LH E +V+RD
Sbjct: 78 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 135
Query: 129 IKSANIFLTAEGNSLKLGDFG---SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+K N+ L +G+ +K+ DFG +K A + F GT Y+APEV D +
Sbjct: 136 LKLENLMLDKDGH-IKITDFGLCKEGIKDGA------TMKXFCGTPEYLAPEVLEDND-- 186
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
+GRAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +L E ++
Sbjct: 187 -YGRAVDWWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 243
Query: 246 CLRHDPAQR-----ATIFELLQHPFL 266
L+ DP QR E++QH F
Sbjct: 244 LLKKDPKQRLGGGSEDAKEIMQHRFF 269
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 310 NIFLTAEGNSLKLGDFG---SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
N+ L +G+ +K+ DFG +K A + F GT Y+APEV D + +GR
Sbjct: 140 NLMLDKDGH-IKITDFGLCKEGIKDGA------TMKXFCGTPEYLAPEVLEDND---YGR 189
Query: 367 AVDIWSLGCVLVEMSSGK 384
AVD W LG V+ EM G+
Sbjct: 190 AVDWWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 24/266 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V L E R+L+ L Y
Sbjct: 17 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS 76
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH-ENTIVHRD 128
+ H + + ME G L S E E R Y ++V A+ LH E +V+RD
Sbjct: 77 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 134
Query: 129 IKSANIFLTAEGNSLKLGDFG---SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+K N+ L +G+ +K+ DFG +K A + F GT Y+APEV D +
Sbjct: 135 LKLENLMLDKDGH-IKITDFGLCKEGIKDGA------TMKXFCGTPEYLAPEVLEDND-- 185
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
+GRAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +L E ++
Sbjct: 186 -YGRAVDWWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 242
Query: 246 CLRHDPAQR-----ATIFELLQHPFL 266
L+ DP QR E++QH F
Sbjct: 243 LLKKDPKQRLGGGSEDAKEIMQHRFF 268
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 310 NIFLTAEGNSLKLGDFG---SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
N+ L +G+ +K+ DFG +K A + F GT Y+APEV D + +GR
Sbjct: 139 NLMLDKDGH-IKITDFGLCKEGIKDGA------TMKXFCGTPEYLAPEVLEDND---YGR 188
Query: 367 AVDIWSLGCVLVEMSSGK 384
AVD W LG V+ EM G+
Sbjct: 189 AVDWWGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 24/266 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V L E R+L+ L Y
Sbjct: 19 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS 78
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH-ENTIVHRD 128
+ H + + ME G L S E E R Y ++V A+ LH E +V+RD
Sbjct: 79 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 136
Query: 129 IKSANIFLTAEGNSLKLGDFG---SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+K N+ L +G+ +K+ DFG +K A + F GT Y+APEV D +
Sbjct: 137 LKLENLMLDKDGH-IKITDFGLCKEGIKDGA------TMKXFCGTPEYLAPEVLEDND-- 187
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
+GRAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +L E ++
Sbjct: 188 -YGRAVDWWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 244
Query: 246 CLRHDPAQR-----ATIFELLQHPFL 266
L+ DP QR E++QH F
Sbjct: 245 LLKKDPKQRLGGGSEDAKEIMQHRFF 270
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 310 NIFLTAEGNSLKLGDFG---SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
N+ L +G+ +K+ DFG +K A + F GT Y+APEV D + +GR
Sbjct: 141 NLMLDKDGH-IKITDFGLCKEGIKDGA------TMKXFCGTPEYLAPEVLEDND---YGR 190
Query: 367 AVDIWSLGCVLVEMSSGK 384
AVD W LG V+ EM G+
Sbjct: 191 AVDWWGLGVVMYEMMCGR 208
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 24/266 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V L E R+L+ L Y
Sbjct: 157 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS 216
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH-ENTIVHRD 128
+ H + + ME G L S E E R Y ++V A+ LH E +V+RD
Sbjct: 217 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 274
Query: 129 IKSANIFLTAEGNSLKLGDFG---SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+K N+ L +G+ +K+ DFG +K A + F GT Y+APEV D +
Sbjct: 275 LKLENLMLDKDGH-IKITDFGLCKEGIKDGA------TMKTFCGTPEYLAPEVLEDND-- 325
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
+GRAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +L E ++
Sbjct: 326 -YGRAVDWWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 382
Query: 246 CLRHDPAQR-----ATIFELLQHPFL 266
L+ DP QR E++QH F
Sbjct: 383 LLKKDPKQRLGGGSEDAKEIMQHRFF 408
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 310 NIFLTAEGNSLKLGDFG---SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
N+ L +G+ +K+ DFG +K A + F GT Y+APEV D + +GR
Sbjct: 279 NLMLDKDGH-IKITDFGLCKEGIKDGA------TMKTFCGTPEYLAPEVLEDND---YGR 328
Query: 367 AVDIWSLGCVLVEMSSGK 384
AVD W LG V+ EM G+
Sbjct: 329 AVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 24/266 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FGKV TG AMK ++ V L E R+L+ L Y
Sbjct: 160 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS 219
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH-ENTIVHRD 128
+ H + + ME G L S E E R Y ++V A+ LH E +V+RD
Sbjct: 220 FQTH-DRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 277
Query: 129 IKSANIFLTAEGNSLKLGDFG---SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+K N+ L +G+ +K+ DFG +K A + F GT Y+APEV D +
Sbjct: 278 LKLENLMLDKDGH-IKITDFGLCKEGIKDGA------TMKTFCGTPEYLAPEVLEDND-- 328
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
+GRAVD W LG V+ EM G+ P+ Y+ +++ +F++ + E P +L E ++
Sbjct: 329 -YGRAVDWWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 385
Query: 246 CLRHDPAQR-----ATIFELLQHPFL 266
L+ DP QR E++QH F
Sbjct: 386 LLKKDPKQRLGGGSEDAKEIMQHRFF 411
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 310 NIFLTAEGNSLKLGDFG---SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
N+ L +G+ +K+ DFG +K A + F GT Y+APEV D + +GR
Sbjct: 282 NLMLDKDGH-IKITDFGLCKEGIKDGA------TMKTFCGTPEYLAPEVLEDND---YGR 331
Query: 367 AVDIWSLGCVLVEMSSGK 384
AVD W LG V+ EM G+
Sbjct: 332 AVDWWGLGVVMYEMMCGR 349
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 11/267 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FGKV A + TG+ VA+K I + + E+ L + +++K Y V
Sbjct: 17 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++E+++ +E + +VQ D + E RR+ +Q++ A+ H + IVHRD+K
Sbjct: 77 IKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 134
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L N +K+ DFG +S T L G+ Y APEV + K+ G
Sbjct: 135 PENLLLDEHLN-VKIADFG----LSNIMTDGNFLKTSCGSPNYAAPEVI--SGKLYAGPE 187
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD+WS G +L M + P+ D + ++FK T+P+ LS + L +
Sbjct: 188 VDVWSCGVILYVMLCRRLPFD--DESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 245
Query: 251 PAQRATIFELLQHPFLIVSCEEDVCNP 277
P R +I E++Q + V E + P
Sbjct: 246 PLNRISIHEIMQDDWFKVDLPEYLLPP 272
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++K+ DFG +S T L G+ Y APEV + K+ G VD+W
Sbjct: 138 LLLDEHLNVKIADFG----LSNIMTDGNFLKTSCGSPNYAAPEVI--SGKLYAGPEVDVW 191
Query: 372 SLGCVLVEM 380
S G +L M
Sbjct: 192 SCGVILYVM 200
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 11/267 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FGKV A + TG+ VA+K I + + E+ L + +++K Y V
Sbjct: 13 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 72
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++E+++ +E + +VQ D + E RR+ +Q++ A+ H + IVHRD+K
Sbjct: 73 IKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 130
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L N +K+ DFG +S T L G+ Y APEV + K+ G
Sbjct: 131 PENLLLDEHLN-VKIADFG----LSNIMTDGNFLKTSCGSPNYAAPEVI--SGKLYAGPE 183
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD+WS G +L M + P+ D + ++FK T+P+ LS + L +
Sbjct: 184 VDVWSCGVILYVMLCRRLPFD--DESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 241
Query: 251 PAQRATIFELLQHPFLIVSCEEDVCNP 277
P R +I E++Q + V E + P
Sbjct: 242 PLNRISIHEIMQDDWFKVDLPEYLLPP 268
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++K+ DFG +S T L G+ Y APEV + K+ G VD+W
Sbjct: 134 LLLDEHLNVKIADFG----LSNIMTDGNFLKTSCGSPNYAAPEVI--SGKLYAGPEVDVW 187
Query: 372 SLGCVLVEM 380
S G +L M
Sbjct: 188 SCGVILYVM 196
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 17/279 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 136 PENLLLGSAGE-LKIADFGWSVHAPS-----SRRTDLCGTLDYLPPEMIEGRM---HDEK 186
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 242
Query: 249 HDPAQRATIFELLQHPFLIV-SCEEDVCNPRSVPASVLQ 286
H+P+QR + E+L+HP++ S + C + A+ L+
Sbjct: 243 HNPSQRPMLREVLEHPWITANSSKPSNCQNKESAAAALE 281
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 138 NLLLGSAGE-LKIADFGWSVHAPS-----SRRTDLCGTLDYLPPEMIEGRM---HDEKVD 188
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 189 LWSLGVLCYEFLVGK 203
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 135/279 (48%), Gaps = 38/279 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN--LVKYY 68
G G KV+ +N E ++ A+K + L ++ D + + E+ L + Q + +++ Y
Sbjct: 65 GSGGSSKVFQVLN-EKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
EI + + + ME C L S ++ + P + Y K +++A+ +H++ IVH D
Sbjct: 123 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSD 180
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K AN FL +G LKL DFG A ++ TT + + VG YM PE D +
Sbjct: 181 LKPAN-FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGAVNYMPPEAIKDMSSSREN 237
Query: 189 --------RAVDIWSLGCVLVEMSSGKRPWAE-----------YDSNYQIMFKVGMGETP 229
D+WSLGC+L M+ GK P+ + D N++I F P
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-------P 290
Query: 230 TIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
IPE + Q + CL+ DP QR +I ELL HP++ +
Sbjct: 291 DIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG------ 365
FL +G LKL DFG A ++ TT + + VG YM PE D +
Sbjct: 186 FLIVDG-MLKLIDFGIANQMQPDTTSVVK-DSQVGAVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 366 --RAVDIWSLGCVLVEMSSGKTNLSGVV 391
D+WSLGC+L M+ GKT ++
Sbjct: 244 ISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + + GT Y+ PE+ H
Sbjct: 139 PENLLLGSAGE-LKIADFGWSVHAPS-----SRRDDLCGTLDYLPPEMIEGRM---HDEK 189
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 245
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 246 HNPSQRPMLREVLEHPWITAN 266
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + + GT Y+ PE+ H VD
Sbjct: 141 NLLLGSAGE-LKIADFGWSVHAPS-----SRRDDLCGTLDYLPPEMIEGRM---HDEKVD 191
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 192 LWSLGVLCYEFLVGK 206
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 11/262 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FGKV A + TG+ VA+K I + + E+ L + +++K Y V
Sbjct: 22 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 81
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++E+++ +E + +VQ D + E RR+ +Q++ A+ H + IVHRD+K
Sbjct: 82 IKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 139
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L N +K+ DFG +S T L G+ Y APEV + K+ G
Sbjct: 140 PENLLLDEHLN-VKIADFG----LSNIMTDGNFLKTSCGSPNYAAPEVI--SGKLYAGPE 192
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD+WS G +L M + P+ D + ++FK T+P+ LS + L +
Sbjct: 193 VDVWSCGVILYVMLCRRLPFD--DESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 250
Query: 251 PAQRATIFELLQHPFLIVSCEE 272
P R +I E++Q + V E
Sbjct: 251 PLNRISIHEIMQDDWFKVDLPE 272
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++K+ DFG +S T L G+ Y APEV + K+ G VD+W
Sbjct: 143 LLLDEHLNVKIADFG----LSNIMTDGNFLKTSCGSPNYAAPEVI--SGKLYAGPEVDVW 196
Query: 372 SLGCVLVEM 380
S G +L M
Sbjct: 197 SCGVILYVM 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 11/262 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FGKV A + TG+ VA+K I + + E+ L + +++K Y V
Sbjct: 23 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV 82
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++E+++ +E + +VQ D + E RR+ +Q++ A+ H + IVHRD+K
Sbjct: 83 IKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 140
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L N +K+ DFG +S T L G+ Y APEV + K+ G
Sbjct: 141 PENLLLDEHLN-VKIADFG----LSNIMTDGNFLKTSCGSPNYAAPEVI--SGKLYAGPE 193
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD+WS G +L M + P+ D + ++FK T+P+ LS + L +
Sbjct: 194 VDVWSCGVILYVMLCRRLPFD--DESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVN 251
Query: 251 PAQRATIFELLQHPFLIVSCEE 272
P R +I E++Q + V E
Sbjct: 252 PLNRISIHEIMQDDWFKVDLPE 273
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E ++K+ DFG +S T L G+ Y APEV + K+ G VD+W
Sbjct: 144 LLLDEHLNVKIADFG----LSNIMTDGNFLKTSCGSPNYAAPEVI--SGKLYAGPEVDVW 197
Query: 372 SLGCVLVEM 380
S G +L M
Sbjct: 198 SCGVILYVM 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 21 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 140 PENLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HD 188
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 244
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 245 LKHNPSQRPMLREVLEHPWITAN 267
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 142 NLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 190
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 191 VDLWSLGVLCYEFLVGK 207
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FGKV N+T ++ AMK + K + V+++ EL+I++G+ LV +
Sbjct: 24 GKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYS 83
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
E+M + ++L G L +Q E V+ + +LV A+ L I+HRD+K
Sbjct: 84 FQDEEDMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQRIIHRDMK 142
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
NI L G+ + + DF A + T ++ GT+ YMAPE+F G+ A
Sbjct: 143 PDNILLDEHGH-VHITDFNIAAMLPRET----QITTMAGTKPYMAPEMFSSRKGAGYSFA 197
Query: 191 VDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETP--TIPESLSDEGQAFAELC 246
VD WSLG E+ G+RP+ S+ +I V ET T P + S E + +
Sbjct: 198 VDWWSLGVTAYELLRGRRPYHIRSSTSSKEI---VHTFETTVVTYPSAWSQEMVSLLKKL 254
Query: 247 LRHDPAQRATIFELLQH-PFLIVSCEEDVCNPRSVPASV 284
L +P QR + +Q+ P++ + V R +P +
Sbjct: 255 LEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFI 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L G+ + + DF A + T ++ GT+ YMAPE+F G+ AVD
Sbjct: 145 NILLDEHGH-VHITDFNIAAMLPRET----QITTMAGTKPYMAPEMFSSRKGAGYSFAVD 199
Query: 370 IWSLGCVLVEMSSGK 384
WSLG E+ G+
Sbjct: 200 WWSLGVTAYELLRGR 214
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE H
Sbjct: 141 PENLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEXIEGRX---HD 189
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 245
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 246 LKHNPSQRPXLREVLEHPWITAN 268
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE H
Sbjct: 143 NLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEXIEGRX---HDEK 191
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 192 VDLWSLGVLCYEFLVGK 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 139 PENLLLGSAGE-LKIADFGWSVHAPSSRRA-----ALCGTLDYLPPEMIEGRM---HDEK 189
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 245
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 246 HNPSQRPMLREVLEHPWITAN 266
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 141 NLLLGSAGE-LKIADFGWSVHAPSSRRA-----ALCGTLDYLPPEMIEGRM---HDEKVD 191
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 192 LWSLGVLCYEFLVGK 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 136 PENLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HD 184
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 240
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 241 LKHNPSQRPMLREVLEHPWITAN 263
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 138 NLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 186
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 187 VDLWSLGVLCYEFLVGK 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 43 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + + GT Y+ PE+ H
Sbjct: 162 PENLLLGSAG-ELKIADFGWSVHAPS-----SRRDDLCGTLDYLPPEMIEGR---MHDEK 212
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 213 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 268
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 269 HNPSQRPMLREVLEHPWITAN 289
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + + GT Y+ PE+ H VD
Sbjct: 164 NLLLGSAG-ELKIADFGWSVHAPS-----SRRDDLCGTLDYLPPEMIEGR---MHDEKVD 214
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 215 LWSLGVLCYEFLVGK 229
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 122/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + + GT Y+ PE+ H
Sbjct: 137 PENLLLGSAGE-LKIADFGWSVHAPS-----SRRDTLCGTLDYLPPEMIEGRM---HDEK 187
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 243
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 244 HNPSQRPMLREVLEHPWITAN 264
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + + GT Y+ PE+ H VD
Sbjct: 139 NLLLGSAGE-LKIADFGWSVHAPS-----SRRDTLCGTLDYLPPEMIEGRM---HDEKVD 189
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 190 LWSLGVLCYEFLVGK 204
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 16 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 75
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 76 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 134
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 135 PENLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HD 183
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 239
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 240 LKHNPSQRPMLREVLEHPWITAN 262
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 137 NLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 185
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 186 VDLWSLGVLCYEFLVGK 202
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 141 PENLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HD 189
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 245
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 246 LKHNPSQRPMLREVLEHPWITAN 268
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 143 NLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 191
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 192 VDLWSLGVLCYEFLVGK 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 136 PENLLLGSAGE-LKIADFGWSVHAPSSRRA-----ALCGTLDYLPPEMIEGRM---HDEK 186
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 242
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 243 HNPSQRPMLREVLEHPWITAN 263
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 138 NLLLGSAGE-LKIADFGWSVHAPSSRRA-----ALCGTLDYLPPEMIEGRM---HDEKVD 188
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 189 LWSLGVLCYEFLVGK 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 139 PENLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HD 187
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 243
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 244 LKHNPSQRPMLREVLEHPWITAN 266
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 141 NLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 189
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 190 VDLWSLGVLCYEFLVGK 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V A ++ EL GT Y+ PE+ H
Sbjct: 136 PENLLLGSAGE-LKIADFGWSV--HAPSSRRTEL---CGTLDYLPPEMIEGRM---HDEK 186
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 242
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 243 HNPSQRPMLREVLEHPWITAN 263
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V A ++ EL GT Y+ PE+ H VD
Sbjct: 138 NLLLGSAGE-LKIADFGWSV--HAPSSRRTEL---CGTLDYLPPEMIEGRM---HDEKVD 188
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 189 LWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 82 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 141 PENLLLGSAGE-LKIADFGWSVHAPS-----SRRTDLCGTLDYLPPEMIEGRM---HDEK 191
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 247
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 248 HNPSQRPMLREVLEHPWITAN 268
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 143 NLLLGSAGE-LKIADFGWSVHAPS-----SRRTDLCGTLDYLPPEMIEGRM---HDEKVD 193
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 194 LWSLGVLCYEFLVGK 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 139 PENLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HD 187
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 243
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 244 LKHNPSQRPMLREVLEHPWITAN 266
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 141 NLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 189
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 190 VDLWSLGVLCYEFLVGK 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 137 PENLLLGSAGE-LKIADFGWSVHAPS-----SRRTDLCGTLDYLPPEMIEGRM---HDEK 187
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 243
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 244 HNPSQRPMLREVLEHPWITAN 264
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 139 NLLLGSAGE-LKIADFGWSVHAPS-----SRRTDLCGTLDYLPPEMIEGRM---HDEKVD 189
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 190 LWSLGVLCYEFLVGK 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 136 PENLLLGSAGE-LKIADFGWSVHAPS-----SRRTXLCGTLDYLPPEMIEGRM---HDEK 186
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 242
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 243 HNPSQRPMLREVLEHPWITAN 263
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 138 NLLLGSAGE-LKIADFGWSVHAPS-----SRRTXLCGTLDYLPPEMIEGRM---HDEKVD 188
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 189 LWSLGVLCYEFLVGK 203
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 43 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 103 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 161
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ GT Y+ PE+ H
Sbjct: 162 PENLLLGSAG-ELKIADFGWSVHAPSSRRTTL-------CGTLDYLPPEMIEGR---MHD 210
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 266
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 267 LKHNPSQRPMLREVLEHPWITAN 289
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ GT Y+ PE+ H
Sbjct: 164 NLLLGSAG-ELKIADFGWSVHAPSSRRTTL-------CGTLDYLPPEMIEGR---MHDEK 212
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 213 VDLWSLGVLCYEFLVGK 229
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 155/325 (47%), Gaps = 30/325 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FG+V+ TG+L A K++ + + + +VE +IL ++ + +V Y
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED---GLPEVLVRRYTKQLVDAISALHENTIVH 126
E + ++ L M + G + + + ++ G E YT Q+V + LH+ I++
Sbjct: 254 FET-KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K N+ L +GN +++ D G AV++ A T + G+ GT +MAPE+ +
Sbjct: 313 RDLKPENVLLDDDGN-VRISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEE--- 365
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFA 243
+ +VD ++LG L EM + + P+ E N ++ +V + + T P+ S + F
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASKDFC 424
Query: 244 ELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGIVLPPMSEDSV 303
E L+ DP +R F SC+ +P S Q L+ G++ PP DS
Sbjct: 425 EALLQKDPEKRLG--------FRDGSCDGLRTHPLFRDISWRQ--LEAGMLTPPFVPDSR 474
Query: 304 KVYARA----NIFLTAEGNSLKLGD 324
VYA+ F T +G + + D
Sbjct: 475 TVYAKCIQDVGAFSTVKGVAFEKAD 499
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L +GN +++ D G AV++ A T + G+ GT +MAPE+ + + +VD
Sbjct: 319 NVLLDDDGN-VRISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEE---YDFSVD 371
Query: 370 IWSLGCVLVEMSSGK 384
++LG L EM + +
Sbjct: 372 YFALGVTLYEMIAAR 386
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 133/277 (48%), Gaps = 38/277 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN--LVKYY 68
G G KV+ +N E ++ A+K + L ++ D + + E+ L + Q + +++ Y
Sbjct: 37 GSGGSSKVFQVLN-EKKQIYAIKYVNL-EEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
EI + + + ME C L S ++ + P + Y K +++A+ +H++ IVH D
Sbjct: 95 DYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSD 152
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K AN FL +G LKL DFG A ++ + + VGT YM PE D +
Sbjct: 153 LKPAN-FLIVDG-MLKLIDFGIANQMQPDXXXVVK-DSQVGTVNYMPPEAIKDMSSSREN 209
Query: 189 --------RAVDIWSLGCVLVEMSSGKRPWAE-----------YDSNYQIMFKVGMGETP 229
D+WSLGC+L M+ GK P+ + D N++I F P
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF-------P 262
Query: 230 TIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
IPE + Q + CL+ DP QR +I ELL HP++
Sbjct: 263 DIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYV 296
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG------ 365
FL +G LKL DFG A ++ + + VGT YM PE D +
Sbjct: 158 FLIVDG-MLKLIDFGIANQMQPDXXXVVK-DSQVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 366 --RAVDIWSLGCVLVEMSSGKTNLSGVV 391
D+WSLGC+L M+ GKT ++
Sbjct: 216 ISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 136 PENLLLGSAG-ELKIADFGWSVHAPS-----SRRTDLCGTLDYLPPEMIEGRM---HDEK 186
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 242
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 243 HNPSQRPMLREVLEHPWITAN 263
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 138 NLLLGSAGE-LKIADFGWSVHAPS-----SRRTDLCGTLDYLPPEMIEGRM---HDEKVD 188
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 189 LWSLGVLCYEFLVGK 203
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A + ++A+K + + A + E+ I + N+++ YG
Sbjct: 17 GKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 77 FHDSTRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKKVIHRDIK 135
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 136 PENLLLGSAGE-LKIADFGWSVHAPSSRRA-----ALCGTLDYLPPEMIEGRM---HDEK 186
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEF----TFPDFVTEGARDLISRLLK 242
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 243 HNPSQRPMLREVLEHPWITAN 263
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 138 NLLLGSAGE-LKIADFGWSVHAPSSRRA-----ALCGTLDYLPPEMIEGRM---HDEKVD 188
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 189 LWSLGVLCYEFLVGK 203
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 155/325 (47%), Gaps = 30/325 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FG+V+ TG+L A K++ + + + +VE +IL ++ + +V Y
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED---GLPEVLVRRYTKQLVDAISALHENTIVH 126
E + ++ L M + G + + + ++ G E YT Q+V + LH+ I++
Sbjct: 254 FET-KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K N+ L +GN +++ D G AV++ A T + G+ GT +MAPE+ +
Sbjct: 313 RDLKPENVLLDDDGN-VRISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEE--- 365
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFA 243
+ +VD ++LG L EM + + P+ E N ++ +V + + T P+ S + F
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASKDFC 424
Query: 244 ELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGIVLPPMSEDSV 303
E L+ DP +R F SC+ +P S Q L+ G++ PP DS
Sbjct: 425 EALLQKDPEKRLG--------FRDGSCDGLRTHPLFRDISWRQ--LEAGMLTPPFVPDSR 474
Query: 304 KVYAR----ANIFLTAEGNSLKLGD 324
VYA+ F T +G + + D
Sbjct: 475 TVYAKNIQDVGAFSTVKGVAFEKAD 499
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L +GN +++ D G AV++ A T + G+ GT +MAPE+ + + +VD
Sbjct: 319 NVLLDDDGN-VRISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEE---YDFSVD 371
Query: 370 IWSLGCVLVEMSSGK 384
++LG L EM + +
Sbjct: 372 YFALGVTLYEMIAAR 386
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E G + +Q E Y +L +A+S H ++HRDIK
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 141 PENLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HD 189
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 245
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 246 LKHNPSQRPMLREVLEHPWITAN 268
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 143 NLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 191
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 192 VDLWSLGVLCYEFLVGK 208
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 155/325 (47%), Gaps = 30/325 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FG+V+ TG+L A K++ + + + +VE +IL ++ + +V Y
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED---GLPEVLVRRYTKQLVDAISALHENTIVH 126
E + ++ L M + G + + + ++ G E YT Q+V + LH+ I++
Sbjct: 254 FET-KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K N+ L +GN +++ D G AV++ A T + G+ GT +MAPE+ +
Sbjct: 313 RDLKPENVLLDDDGN-VRISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEE--- 365
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFA 243
+ +VD ++LG L EM + + P+ E N ++ +V + + T P+ S + F
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASKDFC 424
Query: 244 ELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGIVLPPMSEDSV 303
E L+ DP +R F SC+ +P S Q L+ G++ PP DS
Sbjct: 425 EALLQKDPEKRLG--------FRDGSCDGLRTHPLFRDISWRQ--LEAGMLTPPFVPDSR 474
Query: 304 KVYAR----ANIFLTAEGNSLKLGD 324
VYA+ F T +G + + D
Sbjct: 475 TVYAKNIQDVGAFSTVKGVAFEKAD 499
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L +GN +++ D G AV++ A T + G+ GT +MAPE+ + + +VD
Sbjct: 319 NVLLDDDGN-VRISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEE---YDFSVD 371
Query: 370 IWSLGCVLVEMSSGK 384
++LG L EM + +
Sbjct: 372 YFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 155/325 (47%), Gaps = 30/325 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G FG+V+ TG+L A K++ + + + +VE +IL ++ + +V Y
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA 253
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED---GLPEVLVRRYTKQLVDAISALHENTIVH 126
E + ++ L M + G + + + ++ G E YT Q+V + LH+ I++
Sbjct: 254 FET-KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K N+ L +GN +++ D G AV++ A T + G+ GT +MAPE+ +
Sbjct: 313 RDLKPENVLLDDDGN-VRISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEE--- 365
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFA 243
+ +VD ++LG L EM + + P+ E N ++ +V + + T P+ S + F
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASKDFC 424
Query: 244 ELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGIVLPPMSEDSV 303
E L+ DP +R F SC+ +P S Q L+ G++ PP DS
Sbjct: 425 EALLQKDPEKRLG--------FRDGSCDGLRTHPLFRDISWRQ--LEAGMLTPPFVPDSR 474
Query: 304 KVYAR----ANIFLTAEGNSLKLGD 324
VYA+ F T +G + + D
Sbjct: 475 TVYAKNIQDVGAFSTVKGVAFEKAD 499
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L +GN +++ D G AV++ A T + G+ GT +MAPE+ + + +VD
Sbjct: 319 NVLLDDDGN-VRISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEE---YDFSVD 371
Query: 370 IWSLGCVLVEMSSGK 384
++LG L EM + +
Sbjct: 372 YFALGVTLYEMIAAR 386
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 77 FHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSKRVIHRDIK 135
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 136 PENLLLGSAGE-LKIADFGWSVHAPS-----SRRXXLCGTLDYLPPEMIEGRM---HDEK 186
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 242
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 243 HNPSQRPMLREVLEHPWITAN 263
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 138 NLLLGSAGE-LKIADFGWSVHAPS-----SRRXXLCGTLDYLPPEMIEGRM---HDEKVD 188
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 189 LWSLGVLCYEFLVGK 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 34 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 93
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 94 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 152
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 153 PENLLLGSAG-ELKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGR---MHD 201
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 257
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 258 LKHNPSQRPMLREVLEHPWITAN 280
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 155 NLLLGSAG-ELKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGR---MHDEK 203
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 204 VDLWSLGVLCYEFLVGK 220
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 19 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 137
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 138 PENLLLGSAGE-LKIADFGWSVHAPS-----SRRXXLCGTLDYLPPEMIEGRM---HDEK 188
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 189 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 244
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 245 HNPSQRPMLREVLEHPWITAN 265
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 140 NLLLGSAGE-LKIADFGWSVHAPS-----SRRXXLCGTLDYLPPEMIEGRM---HDEKVD 190
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 191 LWSLGVLCYEFLVGK 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 136
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG + S TT+ G L+ Y+ PE+ H
Sbjct: 137 PENLLLGSAGE-LKIADFGWSCHAPSSRRTTLSGTLD-------YLPPEMIEGRM---HD 185
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 241
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 242 LKHNPSQRPMLREVLEHPWITAN 264
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG + S TT+ G L+ Y+ PE+ H
Sbjct: 139 NLLLGSAGE-LKIADFGWSCHAPSSRRTTLSGTLD-------YLPPEMIEGRM---HDEK 187
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 188 VDLWSLGVLCYEFLVGK 204
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 20/260 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A + ++A+K + + A + E+ I + N+++ YG
Sbjct: 14 GKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 73
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 74 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 132
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 133 PENLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HD 181
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 237
Query: 247 LRHDPAQRATIFELLQHPFL 266
L+H+P+QR + E+L+HP++
Sbjct: 238 LKHNPSQRPMLREVLEHPWI 257
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 135 NLLLGSAGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 183
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 184 VDLWSLGVLCYEFLVGK 200
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 16/258 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 139 PENLLLGSAGE-LKIADFGWSVHAPS-----SRRXXLCGTLDYLPPEMIEGRM---HDEK 189
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 245
Query: 249 HDPAQRATIFELLQHPFL 266
H+P+QR + E+L+HP++
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 141 NLLLGSAGE-LKIADFGWSVHAPS-----SRRXXLCGTLDYLPPEMIEGRM---HDEKVD 191
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 192 LWSLGVLCYEFLVGK 206
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 45/297 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V+ A N ET E+VA+K ++L +D L E+ +L+ + KN+V+ + V
Sbjct: 11 GEGTYGTVFKAKNRETHEIVALKRVRL-DDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+++ L E C + + D PE+ V+ + QL+ + H ++HRD+K
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI-VKSFLFQLLKGLGFCHSRNVLHRDLK 128
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + G LKL DFG A + V T Y P+V + +
Sbjct: 129 PQNLLINRNG-ELKLADFGLARAFGIPVRC---YSAEVVTLWYRPPDVLFGAKL--YSTS 182
Query: 191 VDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPT---------IPE----- 233
+D+WS GC+ E+++ RP + D + +F++ +G TPT +P+
Sbjct: 183 IDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRL-LG-TPTEEQWPSMTKLPDYKPYP 240
Query: 234 -------------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNP 277
L+ G+ + L+ +P QR + E LQHP+ D C P
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF-----SDFCPP 292
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + G LKL DFG A + V T Y P+V + ++D
Sbjct: 131 NLLINRNG-ELKLADFGLARAFGIPVRC---YSAEVVTLWYRPPDVLFGAKL--YSTSID 184
Query: 370 IWSLGCVLVEMSSGKTNL 387
+WS GC+ E+++ L
Sbjct: 185 MWSAGCIFAELANAARPL 202
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 133/278 (47%), Gaps = 13/278 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F KV A + TG+ VA+K I + N + K + E+RI + +N N+VK + V
Sbjct: 23 GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIXKVLNHPNIVKLFEV 81
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + L E + G + LV E R +Q+V A+ H+ IVHRD+
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA--RAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K+ N+ L A+ N +K+ DFG S T +L+ F G Y APE+F K G
Sbjct: 140 KAENLLLDADXN-IKIADFG----FSNEFTFGNKLDAFCGAPPYAAPELFQ--GKKYDGP 192
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VD+WSLG +L + SG P+ N + + + + IP S + + + L
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLIL 250
Query: 250 DPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQD 287
+P++R T+ ++ + + V E+D P P +D
Sbjct: 251 NPSKRGTLEQIXKDRWXNVGHEDDELKPYVEPLPDYKD 288
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L A+ N +K+ DFG S T +L+ F G Y APE+F K G VD
Sbjct: 143 NLLLDADXN-IKIADFG----FSNEFTFGNKLDAFCGAPPYAAPELFQ--GKKYDGPEVD 195
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WSLG +L + SG G
Sbjct: 196 VWSLGVILYTLVSGSLPFDG 215
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 16/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E G + +Q E Y +L +A+S H ++HRDIK
Sbjct: 82 FHDATRVYLILEYAPRGEVYKELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 140
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 141 PENLLLGSAGE-LKIADFGWSVHAPS-----SRRXXLXGTLDYLPPEMIEGRM---HDEK 191
Query: 191 VDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 192 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRLLK 247
Query: 249 HDPAQRATIFELLQHPFLIVS 269
H+P+QR + E+L+HP++ +
Sbjct: 248 HNPSQRPMLREVLEHPWITAN 268
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + GT Y+ PE+ H VD
Sbjct: 143 NLLLGSAGE-LKIADFGWSVHAPS-----SRRXXLXGTLDYLPPEMIEGRM---HDEKVD 193
Query: 370 IWSLGCVLVEMSSGK 384
+WSLG + E GK
Sbjct: 194 LWSLGVLCYEFLVGK 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 80 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 138
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ +FG +V S TT+ G L+ Y+ PE+ H
Sbjct: 139 PENLLLGSAGE-LKIANFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HD 187
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 243
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 244 LKHNPSQRPMLREVLEHPWITAN 266
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ +FG +V S TT+ G L+ Y+ PE+ H
Sbjct: 141 NLLLGSAGE-LKIANFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 189
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 190 VDLWSLGVLCYEFLVGK 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 19 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 79 FHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIK 137
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ +FG +V S TT+ G L+ Y+ PE+ H
Sbjct: 138 PENLLLGSAGE-LKIANFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGR---MHD 186
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E GK P+ Y Y+ + +V T P+ +++ +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF----TFPDFVTEGARDLISRL 242
Query: 247 LRHDPAQRATIFELLQHPFLIVS 269
L+H+P+QR + E+L+HP++ +
Sbjct: 243 LKHNPSQRPMLREVLEHPWITAN 265
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ +FG +V S TT+ G L+ Y+ PE+ H
Sbjct: 140 NLLLGSAGE-LKIANFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 188
Query: 368 VDIWSLGCVLVEMSSGK 384
VD+WSLG + E GK
Sbjct: 189 VDLWSLGVLCYEFLVGK 205
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 109/205 (53%), Gaps = 20/205 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G + VY +N TG VA+KE++L + + E+ +++ + +N+V+ Y V
Sbjct: 14 GNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT--PSTAIREISLMKELKHENIVRLYDV 71
Query: 71 EIHREEMVL----FMELCTEGTLES-LVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
IH E + FM+ + ++S V +T GL LV+ + QL+ ++ HEN I+
Sbjct: 72 -IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL 130
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGF---VGTQAYMAPEVFMDT 182
HRD+K N+ + G LKLGDFG A +P +N F V T Y AP+V M +
Sbjct: 131 HRDLKPQNLLINKRG-QLKLGDFGLARAFG----IP--VNTFSSEVVTLWYRAPDVLMGS 183
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++DIWS GC+L EM +GK
Sbjct: 184 RT--YSTSIDIWSCGCILAEMITGK 206
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGF---VGTQAYMAPEVFMDTNKVGHGR 366
N+ + G LKLGDFG A +P +N F V T Y AP+V M + +
Sbjct: 138 NLLINKRG-QLKLGDFGLARAFG----IP--VNTFSSEVVTLWYRAPDVLMGSRT--YST 188
Query: 367 AVDIWSLGCVLVEMSSGKTNLSGV 390
++DIWS GC+L EM +GK G
Sbjct: 189 SIDIWSCGCILAEMITGKPLFPGT 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 27/266 (10%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
T + G+G FG+V+ + +TG A+K+++L F + EL G+
Sbjct: 95 ATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-----FRAE---ELMACAGLTSPR 146
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
+V YG + +FMEL G+L LV+ + LPE Y Q ++ + LH
Sbjct: 147 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKE-QGCLPEDRALYYLGQALEGLEYLHSRR 205
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG--FVGTQAYMAPEVFMD 181
I+H D+K+ N+ L+++G+ L DFG AV + L G GT+ +MAPEV +
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL- 264
Query: 182 TNKVGHGRA----VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPT--IPESL 235
GR+ VD+WS C+++ M +G PW ++ + K+ P IP S
Sbjct: 265 ------GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG-PLCLKIASEPPPVREIPPSC 317
Query: 236 SD-EGQAFAELCLRHDPAQRATIFEL 260
+ QA E LR +P R + EL
Sbjct: 318 APLTAQAIQE-GLRKEPIHRVSAAEL 342
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG--FVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L+++G+ L DFG AV + L G GT+ +MAPEV + GR+
Sbjct: 215 NVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL-------GRS 267
Query: 368 ----VDIWSLGCVLVEMSSG 383
VD+WS C+++ M +G
Sbjct: 268 CDAKVDVWSSCCMMLHMLNG 287
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 136/298 (45%), Gaps = 50/298 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V++AV+N+ + VA+K+I L D + VK L E++I+ ++ N+VK + +
Sbjct: 20 GCGGNGLVFSAVDNDCDKRVAIKKIVL---TDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 71 -------------EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
+ V ++ E L ++++ + L E R + QL+ +
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE--QGPLLEEHARLFMYQLLRGLK 134
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE 177
+H ++HRD+K AN+F+ E LK+GDFG A + H + G L+ + T+ Y +P
Sbjct: 135 YIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWA------------------------EY 213
+ + N + +A+D+W+ GC+ EM +GK +A E
Sbjct: 195 LLLSPN--NYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQEL 252
Query: 214 DSNYQIMFKVGMGE-----TPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
S + + M E T +P +S E F E L P R T E L HP++
Sbjct: 253 LSVIPVYIRNDMTEPHKPLTQLLP-GISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
AN+F+ E LK+GDFG A + H + G L+ + T+ Y +P + + N + +A+
Sbjct: 149 ANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPN--NYTKAI 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+W+ GC+ EM +GKT +G
Sbjct: 207 DMWAAGCIFAEMLTGKTLFAG 227
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 27/266 (10%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
T + G+G FG+V+ + +TG A+K+++L F + EL G+
Sbjct: 76 ATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-----FRAE---ELMACAGLTSPR 127
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
+V YG + +FMEL G+L LV+ + LPE Y Q ++ + LH
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKE-QGCLPEDRALYYLGQALEGLEYLHSRR 186
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG--FVGTQAYMAPEVFMD 181
I+H D+K+ N+ L+++G+ L DFG AV + L G GT+ +MAPEV +
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL- 245
Query: 182 TNKVGHGRA----VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPT--IPESL 235
GR+ VD+WS C+++ M +G PW ++ + K+ P IP S
Sbjct: 246 ------GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG-PLCLKIASEPPPVREIPPSC 298
Query: 236 SD-EGQAFAELCLRHDPAQRATIFEL 260
+ QA E LR +P R + EL
Sbjct: 299 APLTAQAIQE-GLRKEPIHRVSAAEL 323
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG--FVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L+++G+ L DFG AV + L G GT+ +MAPEV + GR+
Sbjct: 196 NVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL-------GRS 248
Query: 368 ----VDIWSLGCVLVEMSSG 383
VD+WS C+++ M +G
Sbjct: 249 CDAKVDVWSSCCMMLHMLNG 268
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 133/297 (44%), Gaps = 45/297 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V+ A N ET E+VA+K ++L +D L E+ +L+ + KN+V+ + V
Sbjct: 11 GEGTYGTVFKAKNRETHEIVALKRVRL-DDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+++ L E C + + D PE+ V+ + QL+ + H ++HRD+K
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEI-VKSFLFQLLKGLGFCHSRNVLHRDLK 128
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + G LKL +FG A + V T Y P+V + +
Sbjct: 129 PQNLLINRNG-ELKLANFGLARAFGIPVRC---YSAEVVTLWYRPPDVLFGAKL--YSTS 182
Query: 191 VDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPT---------IPE----- 233
+D+WS GC+ E+++ RP + D + +F++ +G TPT +P+
Sbjct: 183 IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL-LG-TPTEEQWPSMTKLPDYKPYP 240
Query: 234 -------------SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNP 277
L+ G+ + L+ +P QR + E LQHP+ D C P
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF-----SDFCPP 292
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + G LKL +FG A + V T Y P+V + ++D
Sbjct: 131 NLLINRNG-ELKLANFGLARAFGIPVRC---YSAEVVTLWYRPPDVLFGAKL--YSTSID 184
Query: 370 IWSLGCVLVEMSSG 383
+WS GC+ E+++
Sbjct: 185 MWSAGCIFAELANA 198
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 133/263 (50%), Gaps = 10/263 (3%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FGK + E G +KEI + + + ++ ++ E+ +L + N+V+Y
Sbjct: 33 GEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMKHPNIVQYRES 91
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGL-PEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + M+ C G L + + + L E + + Q+ A+ +H+ I+HRDI
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDI 151
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
KS NIFLT +G +++LGDFG A +++ + +GT Y++PE+ NK + +
Sbjct: 152 KSQNIFLTKDG-TVQLGDFGIARVLNSTVELA---RACIGTPYYLSPEIC--ENKPYNNK 205
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
+ DIW+LGCVL E+ + K + E S ++ K+ G P + S + ++ +
Sbjct: 206 S-DIWALGCVLYELCTLKHAF-EAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKR 263
Query: 250 DPAQRATIFELLQHPFLIVSCEE 272
+P R ++ +L+ F+ E+
Sbjct: 264 NPRDRPSVNSILEKGFIAKRIEK 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFLT +G +++LGDFG A +++ + +GT Y++PE+ NK + ++ D
Sbjct: 155 NIFLTKDG-TVQLGDFGIARVLNSTVELA---RACIGTPYYLSPEIC--ENKPYNNKS-D 207
Query: 370 IWSLGCVLVEMSSGK 384
IW+LGCVL E+ + K
Sbjct: 208 IWALGCVLYELCTLK 222
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 143/307 (46%), Gaps = 55/307 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V+ + +G ++A K I L + R ++ EL++L N +V +YG
Sbjct: 42 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR--NQIIRELQVLHECNSPYIVGFYGA 99
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVHRDI 129
E+ + ME G+L+ +++ +PE ++ + + ++ ++ L E + I+HRD+
Sbjct: 100 FYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 158
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K +NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 159 KPSNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSV 209
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMF-----------------------KVGM 225
DIWS+G LVEM+ G+ P D+ ++MF K GM
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269
Query: 226 GETPTI-------------PESL-----SDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
P + P L S E Q F CL +PA+RA + +L+ H F+
Sbjct: 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 329
Query: 268 VSCEEDV 274
S E+V
Sbjct: 330 RSDAEEV 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 161 SNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSVQS 211
Query: 369 DIWSLGCVLVEMSSGK 384
DIWS+G LVEM+ G+
Sbjct: 212 DIWSMGLSLVEMAVGR 227
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 19/269 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +G+V + TG A+K I+ +L E+ +L+ ++ N++K Y
Sbjct: 30 GSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEF 89
Query: 71 EIHREEMVLFMELCTEGTL--ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ L ME+ G L E +++ EV KQ++ + LH++ IVHRD
Sbjct: 90 FEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTTYLHKHNIVHRD 146
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ L ++ +K+ DFG +SAH V G++ +GT Y+APEV +
Sbjct: 147 LKPENLLLESKSRDALIKIVDFG----LSAHFEVGGKMKERLGTAYYIAPEVL----RKK 198
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIP---ESLSDEGQAFA 243
+ D+WS G +L + G P+ ++ +I+ +V G+ P +SDE +
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPPFGG-QTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 257
Query: 244 ELCLRHDPAQRATIFELLQHPFLIVSCEE 272
+L L ++P++R + E L HP+++ C +
Sbjct: 258 KLMLTYEPSKRISAEEALNHPWIVKFCSQ 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ +K+ DFG +SAH V G++ +GT Y+APEV + +
Sbjct: 151 NLLLESKSRDALIKIVDFG----LSAHFEVGGKMKERLGTAYYIAPEVL----RKKYDEK 202
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
D+WS G +L + G G
Sbjct: 203 CDVWSCGVILYILLCGYPPFGG 224
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 147/298 (49%), Gaps = 50/298 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A + TGE+VA+K+I+ + F L E++IL+ +N++ + +
Sbjct: 20 GEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 71 EI-----HREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
+ + E+ + EL + L ++ + L + ++ + Q + A+ LH + ++
Sbjct: 78 QRPDSFENFNEVYIIQEL-MQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKI---SAHTTVP-GELNG---FVGTQAYMAPEV 178
HRD+K +N+ + + + LK+ DFG A I +A + P G+ +G FV T+ Y APEV
Sbjct: 135 HRDLKPSNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEV 193
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP--------- 229
+ + K + RA+D+WS GC+L E+ + + D +Q++ G+ TP
Sbjct: 194 MLTSAK--YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 230 ----------TIP-----------ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
++P ++ +G + L DPA+R T E L+HP+L
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 312 FLTAEGNSLKLGDFGSAVKI---SAHTTVP-GELNG---FVGTQAYMAPEVFMDTNKVGH 364
L LK+ DFG A I +A + P G+ +G FV T+ Y APEV + + K +
Sbjct: 143 LLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAK--Y 200
Query: 365 GRAVDIWSLGCVLVEM 380
RA+D+WS GC+L E+
Sbjct: 201 SRAMDVWSCGCILAEL 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 16/258 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 21 GKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L + G LK+ DFG +V + + GT Y+ PE+ H
Sbjct: 140 PENLLLGSNGE-LKIADFGWSVHAPS-----SRRDTLCGTLDYLPPEMIEGRM---HDEK 190
Query: 191 VDIWSLGCVLVEMSSGKRPWA--EYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLR 248
VD+WSLG + E G P+ Y Y+ + +V T P+ +++ + L+
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEF----TFPDFVTEGARDLISRLLK 246
Query: 249 HDPAQRATIFELLQHPFL 266
H+ +QR T+ E+L+HP++
Sbjct: 247 HNASQRLTLAEVLEHPWI 264
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L + G LK+ DFG +V + + GT Y+ PE+ H VD
Sbjct: 142 NLLLGSNGE-LKIADFGWSVHAPS-----SRRDTLCGTLDYLPPEMIEGRM---HDEKVD 192
Query: 370 IWSLGCVLVEMSSG 383
+WSLG + E G
Sbjct: 193 LWSLGVLCYEFLVG 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 20/260 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G+FG VY A ++ ++A+K + + A + E+ I + N+++ YG
Sbjct: 21 GKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L +E GT+ +Q E Y +L +A+S H ++HRDIK
Sbjct: 81 FHDATRVYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSKRVIHRDIK 139
Query: 131 SANIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 140 PENLLLGSNGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HD 188
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
VD+WSLG + E G P+ Y Y+ + +V T P+ +++ +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEF----TFPDFVTEGARDLISRL 244
Query: 247 LRHDPAQRATIFELLQHPFL 266
L+H+ +QR T+ E+L+HP++
Sbjct: 245 LKHNASQRLTLAEVLEHPWI 264
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 13/76 (17%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKI--SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L + G LK+ DFG +V S TT+ G L+ Y+ PE+ H
Sbjct: 142 NLLLGSNGE-LKIADFGWSVHAPSSRRTTLCGTLD-------YLPPEMIEGRM---HDEK 190
Query: 368 VDIWSLGCVLVEMSSG 383
VD+WSLG + E G
Sbjct: 191 VDLWSLGVLCYEFLVG 206
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 21/203 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A +++ G +VA+K I+L +++ + E+ +L+ ++ N+V V
Sbjct: 30 GEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEG-IPSTAIREISLLKELHHPNIVSLIDV 87
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
IH E + + E L+ ++ + GL + ++ Y QL+ ++ H++ I+HRD+K
Sbjct: 88 -IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 131 SANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
N+ + ++G +LKL DFG A V+ H V T Y AP+V M + K
Sbjct: 147 PQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVV---------TLWYRAPDVLMGSKK 196
Query: 185 VGHGRAVDIWSLGCVLVEMSSGK 207
+ +VDIWS+GC+ EM +GK
Sbjct: 197 --YSTSVDIWSIGCIFAEMITGK 217
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 18/87 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + ++G +LKL DFG A V+ H V T Y AP+V M + K
Sbjct: 149 NLLINSDG-ALKLADFGLARAFGIPVRSYTHEVV---------TLWYRAPDVLMGSKK-- 196
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSGV 390
+ +VDIWS+GC+ EM +GK GV
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGV 223
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 21/203 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A +++ G +VA+K I+L +++ + E+ +L+ ++ N+V V
Sbjct: 30 GEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEG-IPSTAIREISLLKELHHPNIVSLIDV 87
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
IH E + + E L+ ++ + GL + ++ Y QL+ ++ H++ I+HRD+K
Sbjct: 88 -IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 131 SANIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
N+ + ++G +LKL DFG A V+ H V T Y AP+V M + K
Sbjct: 147 PQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVV---------TLWYRAPDVLMGSKK 196
Query: 185 VGHGRAVDIWSLGCVLVEMSSGK 207
+ +VDIWS+GC+ EM +GK
Sbjct: 197 --YSTSVDIWSIGCIFAEMITGK 217
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 18/87 (20%)
Query: 310 NIFLTAEGNSLKLGDFGSA------VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 363
N+ + ++G +LKL DFG A V+ H V T Y AP+V M + K
Sbjct: 149 NLLINSDG-ALKLADFGLARAFGIPVRSYTHEVV---------TLWYRAPDVLMGSKK-- 196
Query: 364 HGRAVDIWSLGCVLVEMSSGKTNLSGV 390
+ +VDIWS+GC+ EM +GK GV
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGV 223
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 55/307 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V+ + +G ++A K I L + R ++ EL++L N +V +YG
Sbjct: 15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR--NQIIRELQVLHECNSPYIVGFYGA 72
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVHRDI 129
E+ + ME G+L+ +++ +PE ++ + + ++ ++ L E + I+HRD+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K +NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 132 KPSNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSV 182
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMF-----------------------KVGM 225
DIWS+G LVEM+ G+ P D+ ++MF GM
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242
Query: 226 GETPTI-------------PESL-----SDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
P + P L S E Q F CL +PA+RA + +L+ H F+
Sbjct: 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 268 VSCEEDV 274
S E+V
Sbjct: 303 RSDAEEV 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 134 SNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSVQS 184
Query: 369 DIWSLGCVLVEMSSGK 384
DIWS+G LVEM+ G+
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 55/307 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V+ + +G ++A K I L + R ++ EL++L N +V +YG
Sbjct: 15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR--NQIIRELQVLHECNSPYIVGFYGA 72
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVHRDI 129
E+ + ME G+L+ +++ +PE ++ + + ++ ++ L E + I+HRD+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K +NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 132 KPSNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSV 182
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMF-----------------------KVGM 225
DIWS+G LVEM+ G+ P D+ ++MF GM
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242
Query: 226 GETPTI-------------PESL-----SDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
P + P L S E Q F CL +PA+RA + +L+ H F+
Sbjct: 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 268 VSCEEDV 274
S E+V
Sbjct: 303 RSDAEEV 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 134 SNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSVQS 184
Query: 369 DIWSLGCVLVEMSSGK 384
DIWS+G LVEM+ G+
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 55/307 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V+ + +G ++A K I L + R ++ EL++L N +V +YG
Sbjct: 77 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR--NQIIRELQVLHECNSPYIVGFYGA 134
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVHRDI 129
E+ + ME G+L+ +++ +PE ++ + + ++ ++ L E + I+HRD+
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 193
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K +NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 194 KPSNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSV 244
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMF-----------------------KVGM 225
DIWS+G LVEM+ G+ P D+ ++MF GM
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 304
Query: 226 GETPTI-------------PESL-----SDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
P + P L S E Q F CL +PA+RA + +L+ H F+
Sbjct: 305 DSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 364
Query: 268 VSCEEDV 274
S E+V
Sbjct: 365 RSDAEEV 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 196 SNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSVQS 246
Query: 369 DIWSLGCVLVEMSSGK 384
DIWS+G LVEM+ G+
Sbjct: 247 DIWSMGLSLVEMAVGR 262
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 55/307 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V+ + +G ++A K I L + R ++ EL++L N +V +YG
Sbjct: 15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR--NQIIRELQVLHECNSPYIVGFYGA 72
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVHRDI 129
E+ + ME G+L+ +++ +PE ++ + + ++ ++ L E + I+HRD+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K +NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 132 KPSNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSV 182
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMF-----------------------KVGM 225
DIWS+G LVEM+ G+ P D+ ++MF GM
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242
Query: 226 GETPTI-------------PESL-----SDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
P + P L S E Q F CL +PA+RA + +L+ H F+
Sbjct: 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 268 VSCEEDV 274
S E+V
Sbjct: 303 RSDAEEV 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 134 SNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSVQS 184
Query: 369 DIWSLGCVLVEMSSGK 384
DIWS+G LVEM+ G+
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 55/307 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V+ + +G ++A K I L + R ++ EL++L N +V +YG
Sbjct: 15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR--NQIIRELQVLHECNSPYIVGFYGA 72
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVHRDI 129
E+ + ME G+L+ +++ +PE ++ + + ++ ++ L E + I+HRD+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K +NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 132 KPSNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSV 182
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMF-----------------------KVGM 225
DIWS+G LVEM+ G+ P D+ ++MF GM
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242
Query: 226 GETPTI-------------PESL-----SDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
P + P L S E Q F CL +PA+RA + +L+ H F+
Sbjct: 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
Query: 268 VSCEEDV 274
S E+V
Sbjct: 303 RSDAEEV 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + + G +KL DFG + ++ + N FVGT++YM+PE T+ +
Sbjct: 134 SNILVNSRGE-IKLCDFGVSGQL-----IDSMANSFVGTRSYMSPERLQGTH---YSVQS 184
Query: 369 DIWSLGCVLVEMSSGK 384
DIWS+G LVEM+ G+
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 19/269 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +G+V + TG A+K I+ +L E+ +L+ ++ N++K Y
Sbjct: 13 GSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEF 72
Query: 71 EIHREEMVLFMELCTEGTL--ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ L ME+ G L E +++ EV KQ++ + LH++ IVHRD
Sbjct: 73 FEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGTTYLHKHNIVHRD 129
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ L ++ +K+ DFG +SAH V G++ +GT Y+APEV +
Sbjct: 130 LKPENLLLESKSRDALIKIVDFG----LSAHFEVGGKMKERLGTAYYIAPEVL----RKK 181
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIP---ESLSDEGQAFA 243
+ D+WS G +L + G P+ ++ +I+ +V G+ P +SDE +
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPPFGG-QTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 240
Query: 244 ELCLRHDPAQRATIFELLQHPFLIVSCEE 272
+L L ++P++R + E L HP+++ C +
Sbjct: 241 KLMLTYEPSKRISAEEALNHPWIVKFCSQ 269
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ +K+ DFG +SAH V G++ +GT Y+APEV + +
Sbjct: 134 NLLLESKSRDALIKIVDFG----LSAHFEVGGKMKERLGTAYYIAPEVL----RKKYDEK 185
Query: 368 VDIWSLGCVL 377
D+WS G +L
Sbjct: 186 CDVWSCGVIL 195
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 21/264 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEI--QLHKQNDARFVKDMLVELRI--LEGINQKNLVK 66
G+G FGKV A + +T + VA+K I QL K++D M VE I L+ + +++K
Sbjct: 18 GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMH----MRVEREISYLKLLRHPHIIK 73
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
Y V ++V+ +E + +V+ + E RR+ +Q++ AI H + IVH
Sbjct: 74 LYDVITTPTDIVMVIEYAGGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCHRHKIVH 131
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K N+ L N +K+ DFG +S T L G+ Y APEV K+
Sbjct: 132 RDLKPENLLLDDNLN-VKIADFG----LSNIMTDGNFLKTSCGSPNYAAPEVI--NGKLY 184
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPW-AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
G VD+WS G VL M G+ P+ E+ N +FK +P+ LS Q+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN---LFKKVNSCVYVMPDFLSPGAQSLIRR 241
Query: 246 CLRHDPAQRATIFELLQHPFLIVS 269
+ DP QR TI E+ + P+ V+
Sbjct: 242 MIVADPMQRITIQEIRRDPWFNVN 265
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L + ++K+ DFG +S T L G+ Y APEV K+ G VD+W
Sbjct: 139 LLLDDNLNVKIADFG----LSNIMTDGNFLKTSCGSPNYAAPEVI--NGKLYAGPEVDVW 192
Query: 372 SLGCVLVEMSSGK 384
S G VL M G+
Sbjct: 193 SCGIVLYVMLVGR 205
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FGKV + TG VA+K + K V + E++ L+ +++K Y V
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME + G L + + E+ RR +Q++ A+ H + +VHRD+K
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ L A N+ K+ DFG + +S GE L G+ Y APEV + ++ G
Sbjct: 139 PENVLLDAHMNA-KIADFGLSNMMSD-----GEFLRDSCGSPNYAAPEVI--SGRLYAGP 190
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VDIWS G +L + G P+ D + +FK G IPE L+ L+
Sbjct: 191 EVDIWSCGVILYALLCGTLPFD--DEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 250 DPAQRATIFELLQH 263
DP +RATI ++ +H
Sbjct: 249 DPLKRATIKDIREH 262
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L A N+ K+ DFG + +S GE L G+ Y APEV + ++ G V
Sbjct: 141 NVLLDAHMNA-KIADFGLSNMMSD-----GEFLRDSCGSPNYAAPEVI--SGRLYAGPEV 192
Query: 369 DIWSLGCVLVEMSSG 383
DIWS G +L + G
Sbjct: 193 DIWSCGVILYALLCG 207
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 147/298 (49%), Gaps = 50/298 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A + TGE+VA+K+I+ + F L E++IL+ +N++ + +
Sbjct: 20 GEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 71 EI-----HREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
+ + E+ + EL + L ++ + L + ++ + Q + A+ LH + ++
Sbjct: 78 QRPDSFENFNEVYIIQEL-MQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKI---SAHTTVP-GELNG---FVGTQAYMAPEV 178
HRD+K +N+ + + + LK+ DFG A I +A + P G+ +G +V T+ Y APEV
Sbjct: 135 HRDLKPSNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEV 193
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP--------- 229
+ + K + RA+D+WS GC+L E+ + + D +Q++ G+ TP
Sbjct: 194 MLTSAK--YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 230 ----------TIP-----------ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
++P ++ +G + L DPA+R T E L+HP+L
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKI---SAHTTVP-GELNG---FVGTQAYMAPEVFMDTNK 361
+N+ + + + LK+ DFG A I +A + P G+ +G +V T+ Y APEV + + K
Sbjct: 141 SNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAK 199
Query: 362 VGHGRAVDIWSLGCVLVEM 380
+ RA+D+WS GC+L E+
Sbjct: 200 --YSRAMDVWSCGCILAEL 216
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FGKV + TG VA+K + K V + E++ L+ +++K Y V
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV 79
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME + G L + + E+ RR +Q++ A+ H + +VHRD+K
Sbjct: 80 ISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ L A N+ K+ DFG + +S GE L G+ Y APEV + ++ G
Sbjct: 139 PENVLLDAHMNA-KIADFGLSNMMSD-----GEFLRTSCGSPNYAAPEVI--SGRLYAGP 190
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VDIWS G +L + G P+ D + +FK G IPE L+ L+
Sbjct: 191 EVDIWSCGVILYALLCGTLPFD--DEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQV 248
Query: 250 DPAQRATIFELLQH 263
DP +RATI ++ +H
Sbjct: 249 DPLKRATIKDIREH 262
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L A N+ K+ DFG + +S GE L G+ Y APEV + ++ G V
Sbjct: 141 NVLLDAHMNA-KIADFGLSNMMSD-----GEFLRTSCGSPNYAAPEVI--SGRLYAGPEV 192
Query: 369 DIWSLGCVLVEMSSG 383
DIWS G +L + G
Sbjct: 193 DIWSCGVILYALLCG 207
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 130/290 (44%), Gaps = 33/290 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG FG+V A N A+K+I+ ++ + +L E+ +L +N + +V+YY
Sbjct: 15 GQGAFGQVVKARNALDSRYYAIKKIRHTEEK----LSTILSEVMLLASLNHQYVVRYYAA 70
Query: 71 EIHREEMV-----------LF--MELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
+ R V LF ME C GTL L+ S R +Q+++A+S
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV--------PG---ELNG 166
+H I+HRD+K NIF+ E ++K+GDFG A + + PG L
Sbjct: 131 YIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 167 FVGTQAYMAPEVFMDTNKVGH-GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGM 225
+GT Y+A EV T GH +D++SLG + EM E + + + V +
Sbjct: 190 AIGTAMYVATEVLDGT---GHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSI 246
Query: 226 GETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVC 275
P ++ + L + HDP +R LL +L V +++V
Sbjct: 247 EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVI 296
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 16/83 (19%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTV--------PG---ELNGFVGTQAYMAPEVFMD 358
NIF+ E ++K+GDFG A + + PG L +GT Y+A EV
Sbjct: 146 NIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG 204
Query: 359 TNKVGH-GRAVDIWSLGCVLVEM 380
T GH +D++SLG + EM
Sbjct: 205 T---GHYNEKIDMYSLGIIFFEM 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 28/254 (11%)
Query: 11 GQGRFGKVYTAVN---NETGELVAMK-----EIQLHKQNDARFVKDMLVELRILEGINQK 62
GQG FGKV+ ++ +L AMK +++ + + +D+LVE +N
Sbjct: 33 GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE------VNHP 86
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHEN 122
+VK + ++ L ++ G L + + S E E V+ Y +L A+ LH
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDT 182
I++RD+K NI L EG+ +KL DFG + + H + F GT YMAPEV
Sbjct: 146 GIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEK---KAYSFCGTVEYMAPEV---V 198
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSN--YQIMFKVGMGETPTIPESLSDEGQ 240
N+ GH ++ D WS G ++ EM +G P+ D ++ K +G +P+ LS E Q
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG----MPQFLSPEAQ 254
Query: 241 AFAELCLRHDPAQR 254
+ + + +PA R
Sbjct: 255 SLLRMLFKRNPANR 268
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 267 IVSCEEDVCNPRSVPASVLQDYLKLGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFG 326
++ EEDV + A L LGI+ + + NI L EG+ +KL DFG
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPE--------NILLDEEGH-IKLTDFG 171
Query: 327 SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKTN 386
+ + H + F GT YMAPEV N+ GH ++ D WS G ++ EM +G
Sbjct: 172 LSKESIDHEK---KAYSFCGTVEYMAPEV---VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
Query: 387 LSG 389
G
Sbjct: 226 FQG 228
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 28/254 (11%)
Query: 11 GQGRFGKVYTAVN---NETGELVAMK-----EIQLHKQNDARFVKDMLVELRILEGINQK 62
GQG FGKV+ ++ +L AMK +++ + + +D+LVE +N
Sbjct: 33 GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE------VNHP 86
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHEN 122
+VK + ++ L ++ G L + + S E E V+ Y +L A+ LH
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDT 182
I++RD+K NI L EG+ +KL DFG + + H + F GT YMAPEV
Sbjct: 146 GIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEK---KAYSFCGTVEYMAPEV---V 198
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSN--YQIMFKVGMGETPTIPESLSDEGQ 240
N+ GH ++ D WS G ++ EM +G P+ D ++ K +G +P+ LS E Q
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG----MPQFLSPEAQ 254
Query: 241 AFAELCLRHDPAQR 254
+ + + +PA R
Sbjct: 255 SLLRMLFKRNPANR 268
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 267 IVSCEEDVCNPRSVPASVLQDYLKLGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFG 326
++ EEDV + A L LGI+ + + NI L EG+ +KL DFG
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPE--------NILLDEEGH-IKLTDFG 171
Query: 327 SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKTN 386
+ + H + F GT YMAPEV N+ GH ++ D WS G ++ EM +G
Sbjct: 172 LSKESIDHEK---KAYSFCGTVEYMAPEV---VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
Query: 387 LSG 389
G
Sbjct: 226 FQG 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 28/254 (11%)
Query: 11 GQGRFGKVYTAVN---NETGELVAMK-----EIQLHKQNDARFVKDMLVELRILEGINQK 62
GQG FGKV+ ++ +L AMK +++ + + +D+LVE +N
Sbjct: 34 GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE------VNHP 87
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHEN 122
+VK + ++ L ++ G L + + S E E V+ Y +L A+ LH
Sbjct: 88 FIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSL 146
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDT 182
I++RD+K NI L EG+ +KL DFG + + H + F GT YMAPEV
Sbjct: 147 GIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEK---KAYSFCGTVEYMAPEV---V 199
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSN--YQIMFKVGMGETPTIPESLSDEGQ 240
N+ GH ++ D WS G ++ EM +G P+ D ++ K +G +P+ LS E Q
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG----MPQFLSPEAQ 255
Query: 241 AFAELCLRHDPAQR 254
+ + + +PA R
Sbjct: 256 SLLRMLFKRNPANR 269
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 267 IVSCEEDVCNPRSVPASVLQDYLKLGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFG 326
++ EEDV + A L LGI+ + + NI L EG+ +KL DFG
Sbjct: 122 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPE--------NILLDEEGH-IKLTDFG 172
Query: 327 SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKTN 386
+ + H + F GT YMAPEV N+ GH ++ D WS G ++ EM +G
Sbjct: 173 LSKESIDHEK---KAYSFCGTVEYMAPEV---VNRRGHTQSADWWSFGVLMFEMLTGTLP 226
Query: 387 LSG 389
G
Sbjct: 227 FQG 229
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 121/235 (51%), Gaps = 27/235 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELR---ILEGINQKNLVKY 67
GQG V+ + +TG+L A+K N+ F++ + V++R +L+ +N KN+VK
Sbjct: 18 GQGATANVFRGRHKKTGDLFAIKVF-----NNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 68 YGVE--IHREEMVLFMELCTEGTLESLVQ--STEDGLPEVLVRRYTKQLVDAISALHENT 123
+ +E VL ME C G+L ++++ S GLPE + +V ++ L EN
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 124 IVHRDIKSANIF--LTAEGNSL-KLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE--- 177
IVHR+IK NI + +G S+ KL DFG+A ++ + GT+ Y+ P+
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----QFVSLYGTEEYLHPDMYE 188
Query: 178 --VFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYD---SNYQIMFKVGMGE 227
V ++ +G VD+WS+G ++G P+ ++ N ++M+K+ G+
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 23/105 (21%)
Query: 284 VLQDYLKLGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG 343
++ +K G ++ + ED VY KL DFG+A ++ +
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVY--------------KLTDFGAARELEDDE----QFVS 174
Query: 344 FVGTQAYMAPE-----VFMDTNKVGHGRAVDIWSLGCVLVEMSSG 383
GT+ Y+ P+ V ++ +G VD+WS+G ++G
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 10/257 (3%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G F KV A + TGE+VA+K + K + + E+ L+ + +++ + Y V
Sbjct: 19 GTGGFAKVKLACHILTGEMVAIKIMD--KNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++ + +E C G L + S +D L E R +Q+V A++ +H HRD+K
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIIS-QDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLK 135
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ L E + LKL DFG K + L G+ AY APE+ + + G
Sbjct: 136 PENL-LFDEYHKLKLIDFGLCAKPKGNKDY--HLQTCCGSLAYAAPELIQGKSYL--GSE 190
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
D+WS+G +L + G P+ D N ++K M +P+ LS + L+ D
Sbjct: 191 ADVWSMGILLYVLMCGFLPFD--DDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVD 248
Query: 251 PAQRATIFELLQHPFLI 267
P +R ++ LL HP+++
Sbjct: 249 PKKRISMKNLLNHPWIM 265
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E + LKL DFG K + L G+ AY APE+ + +G D+W
Sbjct: 139 LLFDEYHKLKLIDFGLCAKPKGNKDY--HLQTCCGSLAYAAPELIQGKSYLG--SEADVW 194
Query: 372 SLGCVLVEMSSG 383
S+G +L + G
Sbjct: 195 SMGILLYVLMCG 206
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 138/300 (46%), Gaps = 45/300 (15%)
Query: 11 GQGRFGKVYTAVN-NETGELVAMKEIQLHKQNDA---RFVKDMLVELRILEGINQKNLVK 66
G+G +GKV+ A + G VA+K +++ + ++++ V LR LE N+V+
Sbjct: 20 GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNVVR 78
Query: 67 YYGV----EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE 121
+ V RE ++ L E + L + E G+P ++ QL+ + LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 122 NTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMD 181
+ +VHRD+K NI +T+ G +KL DFG A S L V T Y APEV +
Sbjct: 139 HRVVHRDLKPQNILVTSSGQ-IKLADFGLARIYSFQMA----LTSVVVTLWYRAPEVLLQ 193
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK---RPWAEYDSNYQIMFKVGMGETPTIPESLSDE 238
++ + VD+WS+GC+ EM K R ++ D +I+ +G+ P ++
Sbjct: 194 SS---YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 239 GQAF---------------AEL-------CLRHDPAQRATIFELLQHPFL--IVSCEEDV 274
QAF EL CL +PA+R + + L HP+ + C+E++
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENL 310
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI +T+ G +KL DFG A S L V T Y APEV + ++ + VD
Sbjct: 150 NILVTSSGQ-IKLADFGLARIYSFQMA----LTSVVVTLWYRAPEVLLQSS---YATPVD 201
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WS+GC+ EM K G
Sbjct: 202 LWSVGCIFAEMFRRKPLFRG 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 19/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V+ + +TG A+K+++L + EL G++ +V YG
Sbjct: 67 GRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGA 118
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +FMEL G+L L++ LPE Y Q ++ + LH I+H D+K
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG--FVGTQAYMAPEVFMDTNKVGHG 188
+ N+ L+++G+ L DFG A+ + L G GT+ +MAPEV M
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA-- 235
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQAFAEL 245
VDIWS C+++ M +G PW +Y + K+ P S QA E
Sbjct: 236 -KVDIWSSCCMMLHMLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQE- 292
Query: 246 CLRHDPAQRATIFEL 260
LR +P RA+ EL
Sbjct: 293 GLRKEPVHRASAMEL 307
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG--FVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L+++G+ L DFG A+ + L G GT+ +MAPEV M
Sbjct: 180 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA---K 236
Query: 368 VDIWSLGCVLVEMSSG 383
VDIWS C+++ M +G
Sbjct: 237 VDIWSSCCMMLHMLNG 252
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 121/235 (51%), Gaps = 27/235 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELR---ILEGINQKNLVKY 67
GQG V+ + +TG+L A+K N+ F++ + V++R +L+ +N KN+VK
Sbjct: 18 GQGATANVFRGRHKKTGDLFAIKVF-----NNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 68 YGVE--IHREEMVLFMELCTEGTLESLVQ--STEDGLPEVLVRRYTKQLVDAISALHENT 123
+ +E VL ME C G+L ++++ S GLPE + +V ++ L EN
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 124 IVHRDIKSANIF--LTAEGNSL-KLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE--- 177
IVHR+IK NI + +G S+ KL DFG+A ++ + GT+ Y+ P+
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----QFVXLYGTEEYLHPDMYE 188
Query: 178 --VFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYD---SNYQIMFKVGMGE 227
V ++ +G VD+WS+G ++G P+ ++ N ++M+K+ G+
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 23/105 (21%)
Query: 284 VLQDYLKLGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG 343
++ +K G ++ + ED VY KL DFG+A ++ +
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVY--------------KLTDFGAARELEDDE----QFVX 174
Query: 344 FVGTQAYMAPE-----VFMDTNKVGHGRAVDIWSLGCVLVEMSSG 383
GT+ Y+ P+ V ++ +G VD+WS+G ++G
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI------NQKNL 64
G+G FG+V A +++ + VA+K ++ N+ RF + E+RILE + N N+
Sbjct: 106 GKGSFGQVVKAYDHKVHQHVALKMVR----NEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
+ R + + EL + E + ++ G LVR++ ++ + ALH+N I
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI 221
Query: 125 VHRDIKSANIFLTAEGNS-LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
+H D+K NI L +G S +K+ DFGS+ H V + ++ Y APEV +
Sbjct: 222 IHCDLKPENILLKQQGRSGIKVIDFGSSC--YEHQRV----YTXIQSRFYRAPEVILGAR 275
Query: 184 KVGHGRAVDIWSLGCVLVEMSSG 206
+G +D+WSLGC+L E+ +G
Sbjct: 276 ---YGMPIDMWSLGCILAELLTG 295
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 310 NIFLTAEGNS-LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
NI L +G S +K+ DFGS+ H V + ++ Y APEV + +G +
Sbjct: 230 NILLKQQGRSGIKVIDFGSSC--YEHQRV----YTXIQSRFYRAPEVILGAR---YGMPI 280
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WSLGC+L E+ +G L G
Sbjct: 281 DMWSLGCILAELLTGYPLLPG 301
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI------NQKNL 64
G+G FG+V A +++ + VA+K ++ N+ RF + E+RILE + N N+
Sbjct: 106 GKGXFGQVVKAYDHKVHQHVALKMVR----NEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
+ R + + EL + E + ++ G LVR++ ++ + ALH+N I
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI 221
Query: 125 VHRDIKSANIFLTAEGNS-LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
+H D+K NI L +G S +K+ DFGS+ H V + ++ Y APEV +
Sbjct: 222 IHCDLKPENILLKQQGRSGIKVIDFGSSC--YEHQRV----YXXIQSRFYRAPEVILGAR 275
Query: 184 KVGHGRAVDIWSLGCVLVEMSSG 206
+G +D+WSLGC+L E+ +G
Sbjct: 276 ---YGMPIDMWSLGCILAELLTG 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 310 NIFLTAEGNS-LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
NI L +G S +K+ DFGS+ H V + ++ Y APEV + +G +
Sbjct: 230 NILLKQQGRSGIKVIDFGSSC--YEHQRV----YXXIQSRFYRAPEVILGAR---YGMPI 280
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WSLGC+L E+ +G L G
Sbjct: 281 DMWSLGCILAELLTGYPLLPG 301
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 146/298 (48%), Gaps = 50/298 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A + TGE+VA+K+I+ + F L E++IL+ +N++ + +
Sbjct: 20 GEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 71 EI-----HREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
+ + E+ + EL + L ++ + L + ++ + Q + A+ LH + ++
Sbjct: 78 QRPDSFENFNEVYIIQEL-MQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKI---SAHTTVP-GELNGF---VGTQAYMAPEV 178
HRD+K +N+ + + + LK+ DFG A I +A + P G+ +G V T+ Y APEV
Sbjct: 135 HRDLKPSNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEV 193
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP--------- 229
+ + K + RA+D+WS GC+L E+ + + D +Q++ G+ TP
Sbjct: 194 MLTSAK--YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 230 ----------TIP-----------ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
++P ++ +G + L DPA+R T E L+HP+L
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 10/79 (12%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKI---SAHTTVP-GELNGF---VGTQAYMAPEVFMDTNK 361
+N+ + + + LK+ DFG A I +A + P G+ +G V T+ Y APEV + + K
Sbjct: 141 SNLLINSNCD-LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAK 199
Query: 362 VGHGRAVDIWSLGCVLVEM 380
+ RA+D+WS GC+L E+
Sbjct: 200 --YSRAMDVWSCGCILAEL 216
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI------NQKNL 64
G+G FG+V A +++ + VA+K ++ N+ RF + E+RILE + N N+
Sbjct: 106 GKGSFGQVVKAYDHKVHQHVALKMVR----NEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
+ R + + EL + E + ++ G LVR++ ++ + ALH+N I
Sbjct: 162 IHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI 221
Query: 125 VHRDIKSANIFLTAEGNS-LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
+H D+K NI L +G S +K+ DFGS+ H V + ++ Y APEV +
Sbjct: 222 IHCDLKPENILLKQQGRSGIKVIDFGSSC--YEHQRV----YTXIQSRFYRAPEVILGAR 275
Query: 184 KVGHGRAVDIWSLGCVLVEMSSG 206
+G +D+WSLGC+L E+ +G
Sbjct: 276 ---YGMPIDMWSLGCILAELLTG 295
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 310 NIFLTAEGNS-LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
NI L +G S +K+ DFGS+ H V + ++ Y APEV + +G +
Sbjct: 230 NILLKQQGRSGIKVIDFGSSC--YEHQRV----YTXIQSRFYRAPEVILGAR---YGMPI 280
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WSLGC+L E+ +G L G
Sbjct: 281 DMWSLGCILAELLTGYPLLPG 301
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 19/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V+ + +TG A+K+++L + EL G++ +V YG
Sbjct: 81 GRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGA 132
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +FMEL G+L L++ LPE Y Q ++ + LH I+H D+K
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG--FVGTQAYMAPEVFMDTNKVGHG 188
+ N+ L+++G+ L DFG A+ + L G GT+ +MAPEV M
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA-- 249
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQAFAEL 245
VDIWS C+++ M +G PW +Y + K+ P S QA E
Sbjct: 250 -KVDIWSSCCMMLHMLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQE- 306
Query: 246 CLRHDPAQRATIFEL 260
LR +P RA+ EL
Sbjct: 307 GLRKEPVHRASAMEL 321
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG--FVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L+++G+ L DFG A+ + L G GT+ +MAPEV M
Sbjct: 194 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA---K 250
Query: 368 VDIWSLGCVLVEMSSG 383
VDIWS C+++ M +G
Sbjct: 251 VDIWSSCCMMLHMLNG 266
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 130/266 (48%), Gaps = 17/266 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ--LHKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G+G +G V + +G++ A+K I+ ++ Q R + D+ + R ++ V +Y
Sbjct: 43 GRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRT---VDCPFTVTFY 99
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDG---LPEVLVRRYTKQLVDAISALHEN-TI 124
G + RE V + +L+ + D +PE ++ + +V A+ LH ++
Sbjct: 100 GA-LFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE-VFMDTN 183
+HRD+K +N+ + A G +K DFG IS + + G + Y APE + + N
Sbjct: 159 IHRDVKPSNVLINALGQ-VKXCDFG----ISGYLVDDVAKDIDAGCKPYXAPERINPELN 213
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIP-ESLSDEGQAF 242
+ G+ DIWSLG +E++ + P+ + + +Q + +V +P +P + S E F
Sbjct: 214 QKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDF 273
Query: 243 AELCLRHDPAQRATIFELLQHPFLIV 268
CL+ + +R T EL QHPF +
Sbjct: 274 TSQCLKKNSKERPTYPELXQHPFFTL 299
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE-VFMDTNKVGHGRA 367
+N+ + A G +K DFG IS + + G + Y APE + + N+ G+
Sbjct: 166 SNVLINALGQ-VKXCDFG----ISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVK 220
Query: 368 VDIWSLGCVLVEMS 381
DIWSLG +E++
Sbjct: 221 SDIWSLGITXIELA 234
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 45/298 (15%)
Query: 11 GQGRFGKVYTAVNNETG-ELVAMKEIQLHKQNDA---RFVKDMLVELRILEGINQKNLVK 66
G+G +GKV+ A + + G VA+K +++ + ++++ V LR LE N+V+
Sbjct: 20 GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNVVR 78
Query: 67 YYGV----EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE 121
+ V RE ++ L E + L + E G+P ++ QL+ + LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 122 NTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMD 181
+ +VHRD+K NI +T+ G +KL DFG A S L V T Y APEV +
Sbjct: 139 HRVVHRDLKPQNILVTSSGQ-IKLADFGLARIYSFQMA----LTSVVVTLWYRAPEVLLQ 193
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK---RPWAEYDSNYQIMFKVGMGETPTIPESLSDE 238
++ + VD+WS+GC+ EM K R ++ D +I+ +G+ P ++
Sbjct: 194 SS---YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 239 GQAF---------------AEL-------CLRHDPAQRATIFELLQHPFL--IVSCEE 272
QAF EL CL +PA+R + + L HP+ + C+E
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKE 308
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI +T+ G +KL DFG A S L V T Y APEV + ++ + VD
Sbjct: 150 NILVTSSGQ-IKLADFGLARIYSFQMA----LTSVVVTLWYRAPEVLLQSS---YATPVD 201
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WS+GC+ EM K G
Sbjct: 202 LWSVGCIFAEMFRRKPLFRG 221
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 118/255 (46%), Gaps = 19/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V+ + +TG A+K+++L + EL G++ +V YG
Sbjct: 83 GRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGA 134
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ +FMEL G+L L++ LPE Y Q ++ + LH I+H D+K
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG--FVGTQAYMAPEVFMDTNKVGHG 188
+ N+ L+++G+ L DFG A+ + L G GT+ +MAPEV M
Sbjct: 194 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA-- 251
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQAFAEL 245
VDIWS C+++ M +G PW +Y + K+ P S QA E
Sbjct: 252 -KVDIWSSCCMMLHMLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQE- 308
Query: 246 CLRHDPAQRATIFEL 260
LR +P RA+ EL
Sbjct: 309 GLRKEPVHRASAMEL 323
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG--FVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L+++G+ L DFG A+ + L G GT+ +MAPEV M
Sbjct: 196 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA---K 252
Query: 368 VDIWSLGCVLVEMSSG 383
VDIWS C+++ M +G
Sbjct: 253 VDIWSSCCMMLHMLNG 268
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 43/290 (14%)
Query: 11 GQGRFGKVYTAVNNETG-ELVAMKEIQLHKQNDA---RFVKDMLVELRILEGINQKNLVK 66
G+G +GKV+ A + + G VA+K +++ + ++++ V LR LE N+V+
Sbjct: 20 GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV-LRHLETFEHPNVVR 78
Query: 67 YYGV----EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE 121
+ V RE ++ L E + L + E G+P ++ QL+ + LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 122 NTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMD 181
+ +VHRD+K NI +T+ G +KL DFG A S L V T Y APEV +
Sbjct: 139 HRVVHRDLKPQNILVTSSGQ-IKLADFGLARIYSFQMA----LTSVVVTLWYRAPEVLLQ 193
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK---RPWAEYDSNYQIMFKVGMGETPTIPESLSDE 238
++ + VD+WS+GC+ EM K R ++ D +I+ +G+ P ++
Sbjct: 194 SS---YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 239 GQAF---------------AEL-------CLRHDPAQRATIFELLQHPFL 266
QAF EL CL +PA+R + + L HP+
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI +T+ G +KL DFG A S L V T Y APEV + ++ + VD
Sbjct: 150 NILVTSSGQ-IKLADFGLARIYSFQMA----LTSVVVTLWYRAPEVLLQSS---YATPVD 201
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WS+GC+ EM K G
Sbjct: 202 LWSVGCIFAEMFRRKPLFRG 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 29 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 81
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ V+++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 195
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 196 -GATDYTSSIDVWSAGCVLAELLLGQ 220
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 204
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 205 DVWSAGCVLAELLLGQPIFPG 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 24/252 (9%)
Query: 11 GQGRFGKVY---TAVNNETGELVAMKEIQLHKQNDARFVKDML---VELRILEGINQKNL 64
GQG FGKV+ ++G L AMK ++ V+D + +E IL +N +
Sbjct: 37 GQGSFGKVFLVRKVTRPDSGHLYAMKVLK----KATLKVRDRVRTKMERDILADVNHPFV 92
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
VK + ++ L ++ G L + + S E E V+ Y +L + LH I
Sbjct: 93 VKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALGLDHLHSLGI 151
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
++RD+K NI L EG+ +KL DFG + + H + F GT YMAPEV N+
Sbjct: 152 IYRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEK---KAYSFCGTVEYMAPEV---VNR 204
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSN--YQIMFKVGMGETPTIPESLSDEGQAF 242
GH + D WS G ++ EM +G P+ D ++ K +G +P+ LS E Q+
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLG----MPQFLSTEAQSL 260
Query: 243 AELCLRHDPAQR 254
+ +PA R
Sbjct: 261 LRALFKRNPANR 272
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L EG+ +KL DFG + + H + F GT YMAPEV N+ GH + D
Sbjct: 160 NILLDEEGH-IKLTDFGLSKEAIDHEK---KAYSFCGTVEYMAPEV---VNRQGHSHSAD 212
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
WS G ++ EM +G G
Sbjct: 213 WWSYGVLMFEMLTGSLPFQG 232
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 25/280 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V V+ TG A K I K + AR + + E RI + N+V+ +
Sbjct: 15 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
L +L T G L E +V + E +Q++++I+ H N IVHR++
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNGIVHRNL 131
Query: 130 KSANIFLT--AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L A+G ++KL DFG A++++ +GF GT Y++PEV K +
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLSPEVL---KKDPY 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRP-WAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
+ VDIW+ G +L + G P W E K G + P+ PE +++ E ++ +
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS-PEWDTVTPEAKSLID 243
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASV 284
L +P +R T + L+ P+ +CN V +++
Sbjct: 244 SMLTVNPKKRITADQALKVPW--------ICNRERVASAI 275
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 315 AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLG 374
A+G ++KL DFG A++++ +GF GT Y++PEV K + + VDIW+ G
Sbjct: 142 AKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLSPEVL---KKDPYSKPVDIWACG 194
Query: 375 CVL 377
+L
Sbjct: 195 VIL 197
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 25/280 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V V+ TG A K I K + AR + + E RI + N+V+ +
Sbjct: 14 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
L +L T G L E +V + E +Q++++I+ H N IVHR++
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNGIVHRNL 130
Query: 130 KSANIFLT--AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L A+G ++KL DFG A++++ +GF GT Y++PEV K +
Sbjct: 131 KPENLLLASKAKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLSPEVL---KKDPY 183
Query: 188 GRAVDIWSLGCVLVEMSSGKRP-WAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
+ VDIW+ G +L + G P W E K G + P+ PE +++ E ++ +
Sbjct: 184 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS-PEWDTVTPEAKSLID 242
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASV 284
L +P +R T + L+ P+ +CN V +++
Sbjct: 243 SMLTVNPKKRITADQALKVPW--------ICNRERVASAI 274
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 315 AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLG 374
A+G ++KL DFG A++++ +GF GT Y++PEV K + + VDIW+ G
Sbjct: 141 AKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLSPEVL---KKDPYSKPVDIWACG 193
Query: 375 CVL 377
+L
Sbjct: 194 VIL 196
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 29 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 81
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF- 195
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 196 -GATDYTSSIDVWSAGCVLAELLLGQ 220
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+ + ++
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF--GATDYTSSI 204
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 205 DVWSAGCVLAELLLGQPIFPG 225
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 130/288 (45%), Gaps = 40/288 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDM--LVELRILEGINQKNLVKYY 68
G G +G VY A + +G VA+K +++ + + + + LR LE N+V+
Sbjct: 13 GVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLM 72
Query: 69 GV----EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
V RE ++ L E + L ++ GLP ++ +Q + + LH N
Sbjct: 73 DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
IVHRD+K NI +T+ G ++KL DFG A +I ++ L+ V T Y APEV + +
Sbjct: 133 IVHRDLKPENILVTS-GGTVKLADFGLA-RIYSYQMA---LDPVVVTLWYRAPEVLLQST 187
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIPESLSDEGQ 240
+ VD+WS+GC+ EM K + +E D +I +G+ P +S
Sbjct: 188 ---YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG 244
Query: 241 AF-------------------AELCLR---HDPAQRATIFELLQHPFL 266
AF A+L L +P +R + F LQH +L
Sbjct: 245 AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI +T+ G ++KL DFG A +I ++ L+ V T Y APEV + + + VD
Sbjct: 142 NILVTS-GGTVKLADFGLA-RIYSYQMA---LDPVVVTLWYRAPEVLLQST---YATPVD 193
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WS+GC+ EM K G
Sbjct: 194 MWSVGCIFAEMFRRKPLFCG 213
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 57 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 109
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+
Sbjct: 170 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF- 223
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 224 -GATDYTSSIDVWSAGCVLAELLLGQ 248
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+ + ++
Sbjct: 180 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF--GATDYTSSI 232
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 233 DVWSAGCVLAELLLGQPIFPG 253
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 42 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 94
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 154
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+
Sbjct: 155 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF- 208
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 209 -GATDYTSSIDVWSAGCVLAELLLGQ 233
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+ + ++
Sbjct: 165 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF--GATDYTSSI 217
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 218 DVWSAGCVLAELLLGQPIFPG 238
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 34 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 86
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 146
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+
Sbjct: 147 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF- 200
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 201 -GATDYTSSIDVWSAGCVLAELLLGQ 225
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+ + ++
Sbjct: 157 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF--GATDYTSSI 209
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 210 DVWSAGCVLAELLLGQPIFPG 230
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 63 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 115
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+
Sbjct: 176 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF- 229
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 230 -GATDYTSSIDVWSAGCVLAELLLGQ 254
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+ + ++
Sbjct: 186 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF--GATDYTSSI 238
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 239 DVWSAGCVLAELLLGQPIFPG 259
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 67 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 119
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 179
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+
Sbjct: 180 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF- 233
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 234 -GATDYTSSIDVWSAGCVLAELLLGQ 258
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+ + ++
Sbjct: 190 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF--GATDYTSSI 242
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 243 DVWSAGCVLAELLLGQPIFPG 263
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 65 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 117
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 177
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+
Sbjct: 178 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF- 231
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 232 -GATDYTSSIDVWSAGCVLAELLLGQ 256
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+ + ++
Sbjct: 188 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF--GATDYTSSI 240
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 241 DVWSAGCVLAELLLGQPIFPG 261
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 25/280 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V V+ TG A K I K + AR + + E RI + N+V+ +
Sbjct: 38 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
L +L T G L E +V + E +Q++++I+ H N IVHR++
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNGIVHRNL 154
Query: 130 KSANIFLT--AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L A+G ++KL DFG A++++ +GF GT Y++PEV K +
Sbjct: 155 KPENLLLASKAKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLSPEVL---KKDPY 207
Query: 188 GRAVDIWSLGCVLVEMSSGKRP-WAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
+ VDIW+ G +L + G P W E K G + P+ PE +++ E ++ +
Sbjct: 208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS-PEWDTVTPEAKSLID 266
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASV 284
L +P +R T + L+ P+ +CN V +++
Sbjct: 267 SMLTVNPKKRITADQALKVPW--------ICNRERVASAI 298
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 315 AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLG 374
A+G ++KL DFG A++++ +GF GT Y++PEV K + + VDIW+ G
Sbjct: 165 AKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLSPEVL---KKDPYSKPVDIWACG 217
Query: 375 CVL 377
+L
Sbjct: 218 VIL 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 25/282 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V V TG A K I K+ AR + + E RI + N+V+ +
Sbjct: 13 GKGAFSVVRRCVKLCTGHEYAAKIINT-KKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
L +L T G L E +V + E +Q+++A+ H+ +VHRD+
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV--AREYYSEADASHCIQQILEAVLHCHQMGVVHRDL 129
Query: 130 KSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L + +G ++KL DFG A+++ GF GT Y++PEV K +
Sbjct: 130 KPENLLLASKCKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEVL---RKEAY 183
Query: 188 GRAVDIWSLGCVLVEMSSGKRP-WAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
G+ VDIW+ G +L + G P W E K G + P+ PE +++ E +
Sbjct: 184 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPS-PEWDTVTPEAKNLIN 242
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQ 286
L +PA+R T E L+HP+ VC RS AS++
Sbjct: 243 QMLTINPAKRITAHEALKHPW--------VCQ-RSTVASMMH 275
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 310 NIFLTAE--GNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ G ++KL DFG A+++ GF GT Y++PEV K +G+
Sbjct: 133 NLLLASKCKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEVL---RKEAYGKP 186
Query: 368 VDIWSLGCVL 377
VDIW+ G +L
Sbjct: 187 VDIWACGVIL 196
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 108 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 160
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 220
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+
Sbjct: 221 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF- 274
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 275 -GATDYTSSIDVWSAGCVLAELLLGQ 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+ + ++
Sbjct: 231 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF--GATDYTSSI 283
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 284 DVWSAGCVLAELLLGQPIFPG 304
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 18/204 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG FG+V+ A + +TG+ VA+K++ + + + F L E++IL+ + +N+V +
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEG-FPITALREIKILQLLKHENVVNL--I 83
Query: 71 EIHREE----------MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
EI R + + L + C E L L+ + ++R + L++ + +H
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKIS-AHTTVPGELNGFVGTQAYMAPEVF 179
N I+HRD+K+AN+ +T +G LKL DFG A S A + P V T Y PE+
Sbjct: 143 RNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEM 203
+ + +G +D+W GC++ EM
Sbjct: 202 L--GERDYGPPIDLWGAGCIMAEM 223
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKIS-AHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
AN+ +T +G LKL DFG A S A + P V T Y PE+ + + +G
Sbjct: 154 ANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL--GERDYGPP 210
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
+D+W GC++ EM + + G
Sbjct: 211 IDLWGAGCIMAEMWTRSPIMQG 232
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 13/259 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG V+ V TG + K I D VK+ E+ I+ ++ L+ +
Sbjct: 60 GSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN---EISIMNQLHHPKLINLHDA 116
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ EMVL +E + G L + + + + E V Y +Q + + +HE++IVH DIK
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIK 176
Query: 131 SANIFL-TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
NI T + +S+K+ DFG A K++ V T + APE+ +D VG
Sbjct: 177 PENIMCETKKASSVKIIDFGLATKLNPDEIV----KVTTATAEFAAPEI-VDREPVGF-- 229
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDS--NYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+W++G + + SG P+A D Q + + S+S E + F + L
Sbjct: 230 YTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLL 289
Query: 248 RHDPAQRATIFELLQHPFL 266
+ +P +R T+ + L+HP+L
Sbjct: 290 QKEPRKRLTVHDALEHPWL 308
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 16/262 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V + TG+ A K I K+ AR + + E RI + N+V+ +
Sbjct: 13 GKGAFSVVRRCMKIPTGQEYAAKIINT-KKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
L +L T G L E +V + E +Q++++++ H N IVHRD+
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV--AREYYSEADASHCIQQILESVNHCHLNGIVHRDL 129
Query: 130 KSANIFLT--AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L ++G ++KL DFG A+++ GF GT Y++PEV K +
Sbjct: 130 KPENLLLASKSKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEVL---RKDPY 183
Query: 188 GRAVDIWSLGCVLVEMSSGKRP-WAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
G+ VD+W+ G +L + G P W E K G + P+ PE +++ E +
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS-PEWDTVTPEAKDLIN 242
Query: 245 LCLRHDPAQRATIFELLQHPFL 266
L +PA+R T E L+HP++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 310 NIFLTAE--GNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ G ++KL DFG A+++ GF GT Y++PEV K +G+
Sbjct: 133 NLLLASKSKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEVL---RKDPYGKP 186
Query: 368 VDIWSLGCVL 377
VD+W+ G +L
Sbjct: 187 VDMWACGVIL 196
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 16/262 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V + TG+ A K I K+ AR + + E RI + N+V+ +
Sbjct: 13 GKGAFSVVRRCMKIPTGQEYAAKIINT-KKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
L +L T G L E +V + E +Q++++++ H N IVHRD+
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV--AREYYSEADASHCIQQILESVNHCHLNGIVHRDL 129
Query: 130 KSANIFLT--AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L ++G ++KL DFG A+++ GF GT Y++PEV K +
Sbjct: 130 KPENLLLASKSKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEVL---RKDPY 183
Query: 188 GRAVDIWSLGCVLVEMSSGKRP-WAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
G+ VD+W+ G +L + G P W E K G + P+ PE +++ E +
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS-PEWDTVTPEAKDLIN 242
Query: 245 LCLRHDPAQRATIFELLQHPFL 266
L +PA+R T E L+HP++
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 310 NIFLTAE--GNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ G ++KL DFG A+++ GF GT Y++PEV K +G+
Sbjct: 133 NLLLASKSKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEVL---RKDPYGKP 186
Query: 368 VDIWSLGCVL 377
VD+W+ G +L
Sbjct: 187 VDMWACGVIL 196
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 17/262 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V V+ TG A K I K + AR + + E RI + N+V+ +
Sbjct: 15 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
L +L T G L E +V + E +Q++++I+ H N IVHR++
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNGIVHRNL 131
Query: 130 KSANIFLT--AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L A+G ++KL DFG A++++ +GF GT Y++PEV K +
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLSPEVL---KKDPY 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRP-WAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
+ VDIW+ G +L + G P W E K G + P+ PE +++ E ++ +
Sbjct: 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS-PEWDTVTPEAKSLID 243
Query: 245 LCLRHDPAQRATIFELLQHPFL 266
L +P +R T + L+ P++
Sbjct: 244 SMLTVNPKKRITADQALKVPWI 265
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 315 AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLG 374
A+G ++KL DFG A++++ +GF GT Y++PEV K + + VDIW+ G
Sbjct: 142 AKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLSPEVL---KKDPYSKPVDIWACG 194
Query: 375 CVL 377
+L
Sbjct: 195 VIL 197
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 18/204 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG FG+V+ A + +TG+ VA+K++ + + + F L E++IL+ + +N+V +
Sbjct: 26 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEG-FPITALREIKILQLLKHENVVNL--I 82
Query: 71 EIHREE----------MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
EI R + + L + C E L L+ + ++R + L++ + +H
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 141
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKIS-AHTTVPGELNGFVGTQAYMAPEVF 179
N I+HRD+K+AN+ +T +G LKL DFG A S A + P V T Y PE+
Sbjct: 142 RNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 200
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEM 203
+ + +G +D+W GC++ EM
Sbjct: 201 L--GERDYGPPIDLWGAGCIMAEM 222
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKIS-AHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
AN+ +T +G LKL DFG A S A + P V T Y PE+ + + +G
Sbjct: 153 ANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL--GERDYGPP 209
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
+D+W GC++ EM + + G
Sbjct: 210 IDLWGAGCIMAEMWTRSPIMQG 231
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 141/310 (45%), Gaps = 30/310 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ----LHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FG+V ++ AMK + L + A F ++ V ++ G ++
Sbjct: 83 GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV---LVNGDSKWITTL 139
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
+Y + + L M+ G L +L+ ED LPE + R Y ++V AI ++H+ VH
Sbjct: 140 HYAFQ-DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF--MDTNK 184
RDIK NI + G+ ++L DFGS +K+ TV + VGT Y++PE+ M+ K
Sbjct: 199 RDIKPDNILMDMNGH-IRLADFGSCLKLMEDGTVQSSVA--VGTPDYISPEILQAMEGGK 255
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRP-WAE--YDSNYQIMFKVGMGETPTIPESLSDEGQA 241
+G D WSLG + EM G+ P +AE ++ +IM + PT +S+ +
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKD 315
Query: 242 FAE--LCLRHDPAQRATIFELLQHPFL-------IVSCEEDVCNPRSVPA-----SVLQD 287
+C R + I + +HPF I +CE S P V D
Sbjct: 316 LIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDD 375
Query: 288 YLKLGIVLPP 297
LK +PP
Sbjct: 376 CLKNSETMPP 385
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF--MDTNKVGHGRA 367
NI + G+ ++L DFGS +K+ TV + VGT Y++PE+ M+ K +G
Sbjct: 205 NILMDMNGH-IRLADFGSCLKLMEDGTVQSSVA--VGTPDYISPEILQAMEGGKGRYGPE 261
Query: 368 VDIWSLGCVLVEMSSGKT 385
D WSLG + EM G+T
Sbjct: 262 CDWWSLGVCMYEMLYGET 279
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 18/204 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG FG+V+ A + +TG+ VA+K++ + + + F L E++IL+ + +N+V +
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEG-FPITALREIKILQLLKHENVVNL--I 83
Query: 71 EIHREE----------MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
EI R + + L + C E L L+ + ++R + L++ + +H
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKIS-AHTTVPGELNGFVGTQAYMAPEVF 179
N I+HRD+K+AN+ +T +G LKL DFG A S A + P V T Y PE+
Sbjct: 143 RNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEM 203
+ + +G +D+W GC++ EM
Sbjct: 202 L--GERDYGPPIDLWGAGCIMAEM 223
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKIS-AHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
AN+ +T +G LKL DFG A S A + P V T Y PE+ + + +G
Sbjct: 154 ANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL--GERDYGPP 210
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
+D+W GC++ EM + + G
Sbjct: 211 IDLWGAGCIMAEMWTRSPIMQG 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 18/204 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG FG+V+ A + +TG+ VA+K++ + + + F L E++IL+ + +N+V +
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEG-FPITALREIKILQLLKHENVVNL--I 83
Query: 71 EIHREE----------MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
EI R + + L + C E L L+ + ++R + L++ + +H
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKIS-AHTTVPGELNGFVGTQAYMAPEVF 179
N I+HRD+K+AN+ +T +G LKL DFG A S A + P V T Y PE+
Sbjct: 143 RNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEM 203
+ + +G +D+W GC++ EM
Sbjct: 202 L--GERDYGPPIDLWGAGCIMAEM 223
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKIS-AHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
AN+ +T +G LKL DFG A S A + P V T Y PE+ + + +G
Sbjct: 154 ANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL--GERDYGPP 210
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
+D+W GC++ EM + + G
Sbjct: 211 IDLWGAGCIMAEMWTRSPIMQG 232
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 129/290 (44%), Gaps = 33/290 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG FG+V A N A+K+I+ ++ + +L E+ +L +N + +V+YY
Sbjct: 15 GQGAFGQVVKARNALDSRYYAIKKIRHTEEK----LSTILSEVMLLASLNHQYVVRYYAA 70
Query: 71 EIHREEMV-----------LF--MELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
+ R V LF ME C TL L+ S R +Q+++A+S
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV--------PG---ELNG 166
+H I+HRD+K NIF+ E ++K+GDFG A + + PG L
Sbjct: 131 YIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 167 FVGTQAYMAPEVFMDTNKVGH-GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGM 225
+GT Y+A EV T GH +D++SLG + EM E + + + V +
Sbjct: 190 AIGTAMYVATEVLDGT---GHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSI 246
Query: 226 GETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVC 275
P ++ + L + HDP +R LL +L V +++V
Sbjct: 247 EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVI 296
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 16/83 (19%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTV--------PG---ELNGFVGTQAYMAPEVFMD 358
NIF+ E ++K+GDFG A + + PG L +GT Y+A EV
Sbjct: 146 NIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG 204
Query: 359 TNKVGH-GRAVDIWSLGCVLVEM 380
T GH +D++SLG + EM
Sbjct: 205 T---GHYNEKIDMYSLGIIFFEM 224
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDM--LVELRILEGINQKNLVKYY 68
G G +G VY A + +G VA+K +++ + + + + LR LE N+V+
Sbjct: 13 GVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLM 72
Query: 69 GV----EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
V RE ++ L E + L ++ GLP ++ +Q + + LH N
Sbjct: 73 DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
IVHRD+K NI +T+ G ++KL DFG A +I ++ L V T Y APEV + +
Sbjct: 133 IVHRDLKPENILVTS-GGTVKLADFGLA-RIYSYQMA---LAPVVVTLWYRAPEVLLQST 187
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIPESLSDEGQ 240
+ VD+WS+GC+ EM K + +E D +I +G+ P +S
Sbjct: 188 ---YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG 244
Query: 241 AF-------------------AELCLR---HDPAQRATIFELLQHPFL 266
AF A+L L +P +R + F LQH +L
Sbjct: 245 AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI +T+ G ++KL DFG A +I ++ L V T Y APEV + + + VD
Sbjct: 142 NILVTS-GGTVKLADFGLA-RIYSYQMA---LAPVVVTLWYRAPEVLLQST---YATPVD 193
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WS+GC+ EM K G
Sbjct: 194 MWSVGCIFAEMFRRKPLFCG 213
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K R EL+I+ ++ N+V+ Y+
Sbjct: 29 GNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHCNIVRLRYF 81
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF- 195
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 196 -GATDYTSSIDVWSAGCVLAELLLGQ 220
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+ + ++
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF--GATDYTSSI 204
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 205 DVWSAGCVLAELLLGQPIFPG 225
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K R EL+I+ ++ N+V+ Y+
Sbjct: 29 GNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHCNIVRLRYF 81
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF- 195
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 196 -GATDYTSSIDVWSAGCVLAELLLGQ 220
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N ++ ++ Y APE+ + ++
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSYICSRYYRAPELIF--GATDYTSSI 204
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 205 DVWSAGCVLAELLLGQPIFPG 225
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 129/288 (44%), Gaps = 40/288 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDM--LVELRILEGINQKNLVKYY 68
G G +G VY A + +G VA+K +++ + + + + LR LE N+V+
Sbjct: 13 GVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLM 72
Query: 69 GV----EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
V RE ++ L E + L ++ GLP ++ +Q + + LH N
Sbjct: 73 DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
IVHRD+K NI +T+ G ++KL DFG A +I ++ L V T Y APEV + +
Sbjct: 133 IVHRDLKPENILVTS-GGTVKLADFGLA-RIYSYQMA---LFPVVVTLWYRAPEVLLQST 187
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIPESLSDEGQ 240
+ VD+WS+GC+ EM K + +E D +I +G+ P +S
Sbjct: 188 ---YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG 244
Query: 241 AF-------------------AELCLR---HDPAQRATIFELLQHPFL 266
AF A+L L +P +R + F LQH +L
Sbjct: 245 AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI +T+ G ++KL DFG A +I ++ L V T Y APEV + + + VD
Sbjct: 142 NILVTS-GGTVKLADFGLA-RIYSYQMA---LFPVVVTLWYRAPEVLLQST---YATPVD 193
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WS+GC+ EM K G
Sbjct: 194 MWSVGCIFAEMFRRKPLFCG 213
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 29 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 81
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 195
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 196 -GATDYTSSIDVWSAGCVLAELLLGQ 220
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 204
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 205 DVWSAGCVLAELLLGQPIFPG 225
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 149/350 (42%), Gaps = 81/350 (23%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-- 68
G G FG V + E+G+ A+K++ D R+ L +++L+ +N LV Y+
Sbjct: 16 GTGSFGIVCEVFDIESGKRFALKKVL----QDPRYKNRELDIMKVLDHVNIIKLVDYFYT 71
Query: 69 -----------------------GVEIHREEMVL----------FMELCTE---GTLESL 92
GV H + +++ ME + L+S
Sbjct: 72 TGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSF 131
Query: 93 VQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAV 152
++S +P L+ Y QL A+ +H I HRDIK N+ + ++ N+LKL DFGSA
Sbjct: 132 IRSGR-SIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAK 190
Query: 153 KISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWA 211
K+ +P E + + ++ Y APE+ + + + ++D+WS+GCV E+ GK ++
Sbjct: 191 KL-----IPSEPSVAXICSRFYRAPELMLGATE--YTPSIDLWSIGCVFGELILGKPLFS 243
Query: 212 EYDSNYQIMFKVGMGETPT---------------------------IPESLSDEGQAFAE 244
S Q++ + + TPT +PE E
Sbjct: 244 GETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLE 303
Query: 245 LCLRHDPAQRATIFELLQHPF---LIVSCEEDVCNPRSVPASVLQDYLKL 291
LR++P R +E + HPF L S E +V N + P V Q+ +L
Sbjct: 304 QILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQL 353
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + ++ N+LKL DFGSA K+ +P E + + ++ Y APE+ + + + ++
Sbjct: 171 NLLVNSKDNTLKLCDFGSAKKL-----IPSEPSVAXICSRFYRAPELMLGATE--YTPSI 223
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS+GCV E+ GK SG
Sbjct: 224 DLWSIGCVFGELILGKPLFSG 244
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 30 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 82
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 142
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 143 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 196
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 197 -GATDYTSSIDVWSAGCVLAELLLGQ 221
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 153 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 205
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 206 DVWSAGCVLAELLLGQPIFPG 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 29 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 81
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 195
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 196 -GATDYTSSIDVWSAGCVLAELLLGQ 220
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 204
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 205 DVWSAGCVLAELLLGQPIFPG 225
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 33 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 85
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 145
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 146 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 199
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 200 -GATDYTSSIDVWSAGCVLAELLLGQ 224
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 156 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 208
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 209 DVWSAGCVLAELLLGQPIFPG 229
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 48 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 100
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 161 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 214
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 215 -GATDYTSSIDVWSAGCVLAELLLGQ 239
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 171 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 223
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 224 DVWSAGCVLAELLLGQPIFPG 244
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 41 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 93
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 154 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 207
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 208 -GATDYTSSIDVWSAGCVLAELLLGQ 232
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 164 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 216
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 217 DVWSAGCVLAELLLGQPIFPG 237
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 37 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 89
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 150 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 203
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 204 -GATDYTSSIDVWSAGCVLAELLLGQ 228
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 160 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 212
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 213 DVWSAGCVLAELLLGQPIFPG 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 63 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 115
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 176 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 229
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 230 -GATDYTSSIDVWSAGCVLAELLLGQ 254
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 186 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 238
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 239 DVWSAGCVLAELLLGQPIFPG 259
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK--YY 68
G G FG VY A ++GELVA+K++ K+ R EL+I+ ++ N+V+ Y+
Sbjct: 41 GNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCNIVRLRYF 93
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQ------STEDGLPEVLVRRYTKQLVDAISALHEN 122
++ +++ L + E++ + + LP + V+ Y QL +++ +H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 154 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 207
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 208 -GATDYTSSIDVWSAGCVLAELLLGQ 232
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 164 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 216
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 217 DVWSAGCVLAELLLGQPIFPG 237
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 25/282 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V V + A K I K+ AR + + E RI + N+V+ +
Sbjct: 40 GKGAFSVVRRCVKKTPTQEYAAKIINT-KKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
L +L T G L E +V + E Q++++++ +H++ IVHRD+
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIV--AREYYSEADASHCIHQILESVNHIHQHDIVHRDL 156
Query: 130 KSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L + +G ++KL DFG A+++ GF GT Y++PEV K +
Sbjct: 157 KPENLLLASKCKGAAVKLADFGLAIEVQGEQQA---WFGFAGTPGYLSPEVL---RKDPY 210
Query: 188 GRAVDIWSLGCVLVEMSSGKRP-WAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
G+ VDIW+ G +L + G P W E K G + P+ PE +++ E +
Sbjct: 211 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPS-PEWDTVTPEAKNLIN 269
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQ 286
L +PA+R T + L+HP+ VC RS AS++
Sbjct: 270 QMLTINPAKRITADQALKHPW--------VCQ-RSTVASMMH 302
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 310 NIFLTAE--GNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ G ++KL DFG A+++ GF GT Y++PEV K +G+
Sbjct: 160 NLLLASKCKGAAVKLADFGLAIEVQGEQQA---WFGFAGTPGYLSPEVL---RKDPYGKP 213
Query: 368 VDIWSLGCVL 377
VDIW+ G +L
Sbjct: 214 VDIWACGVIL 223
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 144/312 (46%), Gaps = 30/312 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ----LHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FG+V T + AMK + L + A F ++ V ++ G Q
Sbjct: 99 GRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV---LVNGDCQWITAL 155
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
+Y + + L M+ G L +L+ ED LPE + R Y ++V AI ++H+ VH
Sbjct: 156 HYAFQ-DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 214
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF--MDTNK 184
RDIK N+ L G+ ++L DFGS +K++ TV + VGT Y++PE+ M+
Sbjct: 215 RDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDGM 271
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRP-WAE--YDSNYQIMFKVGMGETPTIPESLSDEGQA 241
+G D WSLG + EM G+ P +AE ++ +IM + P+ +S+E +
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKD 331
Query: 242 FAE--LCLRHDPAQRATIFELLQHPFL-------IVSCEE----DVCNPRSVPA-SVLQD 287
+ +C R + I + +H F I + E DV +P V D
Sbjct: 332 LIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDD 391
Query: 288 YLKLGIVLPPMS 299
L+ +LPP S
Sbjct: 392 VLRNTEILPPGS 403
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF--MDTNKVGHGRA 367
N+ L G+ ++L DFGS +K++ TV + VGT Y++PE+ M+ +G
Sbjct: 221 NVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDGMGKYGPE 277
Query: 368 VDIWSLGCVLVEMSSGKT 385
D WSLG + EM G+T
Sbjct: 278 CDWWSLGVCMYEMLYGET 295
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 45/292 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF------VKDMLVELRILEGINQKNL 64
G G +G VY A + +G VA+K +++ V+++ + LR LE N+
Sbjct: 18 GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL-LRRLEAFEHPNV 76
Query: 65 VKYYGV----EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL 119
V+ V RE ++ L E + L ++ GLP ++ +Q + + L
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 136
Query: 120 HENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
H N IVHRD+K NI +T+ G ++KL DFG A +I ++ L V T Y APEV
Sbjct: 137 HANCIVHRDLKPENILVTS-GGTVKLADFGLA-RIYSYQMA---LTPVVVTLWYRAPEVL 191
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIPESLS 236
+ + + VD+WS+GC+ EM K + +E D +I +G+ P +S
Sbjct: 192 LQST---YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 248
Query: 237 DEGQAF-------------------AELCLR---HDPAQRATIFELLQHPFL 266
AF A+L L +P +R + F LQH +L
Sbjct: 249 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI +T+ G ++KL DFG A +I ++ L V T Y APEV + + + VD
Sbjct: 150 NILVTS-GGTVKLADFGLA-RIYSYQMA---LTPVVVTLWYRAPEVLLQST---YATPVD 201
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
+WS+GC+ EM K G
Sbjct: 202 MWSVGCIFAEMFRRKPLFCG 221
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 15/269 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V + TG+ A+K I + + +L E+++L+ ++ N++K Y
Sbjct: 58 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF 117
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L E+ T G L + S + EV R +Q++ I+ +H+N IVHRD+K
Sbjct: 118 FEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 176
Query: 131 SANIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L ++ ++++ DFG +S H ++ +GT Y+APEV T +
Sbjct: 177 PENLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTAYYIAPEVLHGT----YD 228
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPE--SLSDEGQAFAEL 245
D+WS G +L + SG P+ + Y I+ KV G+ T +P+ +S+ +
Sbjct: 229 EKCDVWSTGVILYILLSGCPPFNGAN-EYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 287
Query: 246 CLRHDPAQRATIFELLQHPFLIVSCEEDV 274
L + P+ R + + L H ++ +E +
Sbjct: 288 MLTYVPSMRISARDALDHEWIQTYTKEQI 316
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 310 NIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ ++++ DFG +S H ++ +GT Y+APEV T +
Sbjct: 179 NLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTAYYIAPEVLHGT----YDEK 230
Query: 368 VDIWSLGCVLVEMSSG 383
D+WS G +L + SG
Sbjct: 231 CDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 15/269 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V + TG+ A+K I + + +L E+++L+ ++ N++K Y
Sbjct: 59 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF 118
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L E+ T G L + S + EV R +Q++ I+ +H+N IVHRD+K
Sbjct: 119 FEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 177
Query: 131 SANIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L ++ ++++ DFG +S H ++ +GT Y+APEV T +
Sbjct: 178 PENLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTAYYIAPEVLHGT----YD 229
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPE--SLSDEGQAFAEL 245
D+WS G +L + SG P+ + Y I+ KV G+ T +P+ +S+ +
Sbjct: 230 EKCDVWSTGVILYILLSGCPPFNGAN-EYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 288
Query: 246 CLRHDPAQRATIFELLQHPFLIVSCEEDV 274
L + P+ R + + L H ++ +E +
Sbjct: 289 MLTYVPSMRISARDALDHEWIQTYTKEQI 317
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 310 NIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ ++++ DFG +S H ++ +GT Y+APEV T +
Sbjct: 180 NLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTAYYIAPEVLHGT----YDEK 231
Query: 368 VDIWSLGCVLVEMSSG 383
D+WS G +L + SG
Sbjct: 232 CDVWSTGVILYILLSG 247
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 21/271 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V V G+ A K I K+ AR + + E RI + N+V+ +
Sbjct: 31 GKGAFSVVRRCVKVLAGQEYAAKIINT-KKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
L +L T G L E +V + E +Q+++A+ H+ +VHRD+
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIV--AREYYSEADASHCIQQILEAVLHCHQMGVVHRDL 147
Query: 130 KSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L + +G ++KL DFG A+++ GF GT Y++PEV K +
Sbjct: 148 KPENLLLASKLKGAAVKLADFGLAIEVEGEQQA---WFGFAGTPGYLSPEVL---RKDPY 201
Query: 188 GRAVDIWSLGCVLVEMSSGKRP-WAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
G+ VD+W+ G +L + G P W E K G + P+ PE +++ E +
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS-PEWDTVTPEAKDLIN 260
Query: 245 LCLRHDPAQRATIFELLQHPFL-----IVSC 270
L +P++R T E L+HP++ + SC
Sbjct: 261 KMLTINPSKRITAAEALKHPWISHRSTVASC 291
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 310 NIFLTAE--GNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ G ++KL DFG A+++ GF GT Y++PEV K +G+
Sbjct: 151 NLLLASKLKGAAVKLADFGLAIEVEGEQQA---WFGFAGTPGYLSPEVL---RKDPYGKP 204
Query: 368 VDIWSLGCVL 377
VD+W+ G +L
Sbjct: 205 VDLWACGVIL 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 144/312 (46%), Gaps = 30/312 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ----LHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FG+V T + AMK + L + A F ++ V ++ G Q
Sbjct: 83 GRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV---LVNGDCQWITAL 139
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
+Y + + L M+ G L +L+ ED LPE + R Y ++V AI ++H+ VH
Sbjct: 140 HYAFQ-DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 198
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF--MDTNK 184
RDIK N+ L G+ ++L DFGS +K++ TV + VGT Y++PE+ M+
Sbjct: 199 RDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDGM 255
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRP-WAE--YDSNYQIMFKVGMGETPTIPESLSDEGQA 241
+G D WSLG + EM G+ P +AE ++ +IM + P+ +S+E +
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKD 315
Query: 242 FAE--LCLRHDPAQRATIFELLQHPFL-------IVSCEE----DVCNPRSVPA-SVLQD 287
+ +C R + I + +H F I + E DV +P V D
Sbjct: 316 LIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDD 375
Query: 288 YLKLGIVLPPMS 299
L+ +LPP S
Sbjct: 376 VLRNTEILPPGS 387
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF--MDTNKVGHGRA 367
N+ L G+ ++L DFGS +K++ TV + VGT Y++PE+ M+ +G
Sbjct: 205 NVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVA--VGTPDYISPEILQAMEDGMGKYGPE 261
Query: 368 VDIWSLGCVLVEMSSGKT 385
D WSLG + EM G+T
Sbjct: 262 CDWWSLGVCMYEMLYGET 279
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 15/269 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V + TG+ A+K I + + +L E+++L+ ++ N++K Y
Sbjct: 35 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF 94
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L E+ T G L + S + EV R +Q++ I+ +H+N IVHRD+K
Sbjct: 95 FEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIVHRDLK 153
Query: 131 SANIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L ++ ++++ DFG +S H ++ +GT Y+APEV T +
Sbjct: 154 PENLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTAYYIAPEVLHGT----YD 205
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPE--SLSDEGQAFAEL 245
D+WS G +L + SG P+ + Y I+ KV G+ T +P+ +S+ +
Sbjct: 206 EKCDVWSTGVILYILLSGCPPFNGAN-EYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 246 CLRHDPAQRATIFELLQHPFLIVSCEEDV 274
L + P+ R + + L H ++ +E +
Sbjct: 265 MLTYVPSMRISARDALDHEWIQTYTKEQI 293
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 310 NIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ ++++ DFG +S H ++ +GT Y+APEV T +
Sbjct: 156 NLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTAYYIAPEVLHGT----YDEK 207
Query: 368 VDIWSLGCVLVEMSSG 383
D+WS G +L + SG
Sbjct: 208 CDVWSTGVILYILLSG 223
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 24/271 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILE-GINQKNLVKYYG 69
G+G + KV +T + AMK ++ ND + + E + E N LV +
Sbjct: 14 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 73
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ +E G L +Q LPE R Y+ ++ A++ LHE I++RD+
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIYRDL 132
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +EG+ +KL D+G + PG+ F GT Y+APE+ + +G
Sbjct: 133 KLDNVLLDSEGH-IKLTDYG----MCKEGLRPGDTTSXFCGTPNYIAPEILRGED---YG 184
Query: 189 RAVDIWSLGCVLVEMSSGKRPW------AEYDSNYQ-IMFKVGMGETPTIPESLSDEGQA 241
+VD W+LG ++ EM +G+ P+ D N + +F+V + + IP SLS + +
Sbjct: 185 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAAS 244
Query: 242 FAELCLRHDPAQR-----ATIFELLQ-HPFL 266
+ L DP +R T F +Q HPF
Sbjct: 245 VLKSFLNKDPKERLGCHPQTGFADIQGHPFF 275
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +EG+ +KL D+G + PG+ F GT Y+APE+ + +G +V
Sbjct: 136 NVLLDSEGH-IKLTDYG----MCKEGLRPGDTTSXFCGTPNYIAPEILRGED---YGFSV 187
Query: 369 DIWSLGCVLVEMSSGKT 385
D W+LG ++ EM +G++
Sbjct: 188 DWWALGVLMFEMMAGRS 204
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 24/271 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILE-GINQKNLVKYYG 69
G+G + KV +T + AMK ++ ND + + E + E N LV +
Sbjct: 18 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 77
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ +E G L +Q LPE R Y+ ++ A++ LHE I++RD+
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGIIYRDL 136
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +EG+ +KL D+G + PG+ F GT Y+APE+ + +G
Sbjct: 137 KLDNVLLDSEGH-IKLTDYG----MCKEGLRPGDTTSXFCGTPNYIAPEILRGED---YG 188
Query: 189 RAVDIWSLGCVLVEMSSGKRPW------AEYDSNYQ-IMFKVGMGETPTIPESLSDEGQA 241
+VD W+LG ++ EM +G+ P+ D N + +F+V + + IP SLS + +
Sbjct: 189 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAAS 248
Query: 242 FAELCLRHDPAQR-----ATIFELLQ-HPFL 266
+ L DP +R T F +Q HPF
Sbjct: 249 VLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +EG+ +KL D+G + PG+ F GT Y+APE+ + +G +V
Sbjct: 140 NVLLDSEGH-IKLTDYG----MCKEGLRPGDTTSXFCGTPNYIAPEILRGED---YGFSV 191
Query: 369 DIWSLGCVLVEMSSGKT 385
D W+LG ++ EM +G++
Sbjct: 192 DWWALGVLMFEMMAGRS 208
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK---- 66
G G FG VY A ++GELVA+K++ K R EL+I+ ++ N+V+
Sbjct: 29 GNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHCNIVRLRYF 81
Query: 67 YYGVEIHREEMVLFMEL----CTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHEN 122
+Y ++E+ L + L T + + LP + V+ Y QL +++ +H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMD 181
I HRDIK N+ L + LKL DFGSA ++ V GE N + ++ Y APE+
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF- 195
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ ++D+WS GCVL E+ G+
Sbjct: 196 -GATDYTSSIDVWSAGCVLAELLLGQ 220
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L + LKL DFGSA ++ V GE N + ++ Y APE+ + ++
Sbjct: 152 NLLLDPDTAVLKLCDFGSAKQL-----VRGEPNVSXICSRYYRAPELIF--GATDYTSSI 204
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS GCVL E+ G+ G
Sbjct: 205 DVWSAGCVLAELLLGQPIFPG 225
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 15/267 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V + TG+ A+K I + + +L E+++L+ ++ N++K Y
Sbjct: 41 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF 100
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L E+ T G L + S + EV R +Q++ I+ +H+N IVHRD+K
Sbjct: 101 FEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKNKIVHRDLK 159
Query: 131 SANIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L ++ ++++ DFG +S H ++ +GT Y+APEV T +
Sbjct: 160 PENLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTAYYIAPEVLHGT----YD 211
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPE--SLSDEGQAFAEL 245
D+WS G +L + SG P+ + Y I+ KV G+ T +P+ +S+ +
Sbjct: 212 EKCDVWSTGVILYILLSGCPPFNGAN-EYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 270
Query: 246 CLRHDPAQRATIFELLQHPFLIVSCEE 272
L + P+ R + + L H ++ +E
Sbjct: 271 MLTYVPSMRISARDALDHEWIQTYTKE 297
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 310 NIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ ++++ DFG +S H ++ +GT Y+APEV T +
Sbjct: 162 NLLLESKSKDANIRIIDFG----LSTHFEASKKMKDKIGTAYYIAPEVLHGT----YDEK 213
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
D+WS G +L + SG +G
Sbjct: 214 CDVWSTGVILYILLSGCPPFNG 235
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 48/292 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+VY A++ T E VA+K I+L + + + E+ +L+ + +N+++ V
Sbjct: 43 GEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEG-VPGTAIREVSLLKELQHRNIIELKSV 101
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEV---LVRRYTKQLVDAISALHENTIVHR 127
H + L E E+ ++ D P+V +++ + QL++ ++ H +HR
Sbjct: 102 IHHNHRLHLIFEYA-----ENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHR 156
Query: 128 DIKSANIFLT----AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
D+K N+ L+ +E LK+GDFG A A + + T Y PE+ + +
Sbjct: 157 DLKPQNLLLSVSDASETPVLKIGDFGLA---RAFGIPIRQFTHEIITLWYRPPEILLGSR 213
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKV----GMGETPTIP--ESLSD 237
+ +VDIWS+ C+ EM K P DS +FK+ G+ + T P +L D
Sbjct: 214 H--YSTSVDIWSIACIWAEMLM-KTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPD 270
Query: 238 EGQAFAEL-----------------------CLRHDPAQRATIFELLQHPFL 266
Q+F + L DP +R + L+HP+
Sbjct: 271 WKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 315 AEGNSLKLGDFGSAVKISAHTTVP-GELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSL 373
+E LK+GDFG A +P + + T Y PE+ + + + +VDIWS+
Sbjct: 171 SETPVLKIGDFGLARAFG----IPIRQFTHEIITLWYRPPEILLGSRH--YSTSVDIWSI 224
Query: 374 GCVLVEM 380
C+ EM
Sbjct: 225 ACIWAEM 231
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 24/271 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILE-GINQKNLVKYYG 69
G+G + KV +T + AMK ++ ND + + E + E N LV +
Sbjct: 29 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 88
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ +E G L +Q + LPE R Y+ ++ A++ LHE I++RD+
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDL 147
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +EG+ +KL D+G + PG+ F GT Y+APE+ + +G
Sbjct: 148 KLDNVLLDSEGH-IKLTDYG----MCKEGLRPGDTTSXFCGTPNYIAPEILRGED---YG 199
Query: 189 RAVDIWSLGCVLVEMSSGKRPW------AEYDSNYQ-IMFKVGMGETPTIPESLSDEGQA 241
+VD W+LG ++ EM +G+ P+ D N + +F+V + + IP S+S + +
Sbjct: 200 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAAS 259
Query: 242 FAELCLRHDPAQR-----ATIFELLQ-HPFL 266
+ L DP +R T F +Q HPF
Sbjct: 260 VLKSFLNKDPKERLGCLPQTGFADIQGHPFF 290
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +EG+ +KL D+G + PG+ F GT Y+APE+ + +G +V
Sbjct: 151 NVLLDSEGH-IKLTDYG----MCKEGLRPGDTTSXFCGTPNYIAPEILRGED---YGFSV 202
Query: 369 DIWSLGCVLVEMSSGKT 385
D W+LG ++ EM +G++
Sbjct: 203 DWWALGVLMFEMMAGRS 219
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 24/271 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILE-GINQKNLVKYYG 69
G+G + KV +T + AM+ ++ ND + + E + E N LV +
Sbjct: 61 GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 120
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ +E G L +Q + LPE R Y+ ++ A++ LHE I++RD+
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDL 179
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHG 188
K N+ L +EG+ +KL D+G + PG+ F GT Y+APE+ + +G
Sbjct: 180 KLDNVLLDSEGH-IKLTDYG----MCKEGLRPGDTTSTFCGTPNYIAPEILRGED---YG 231
Query: 189 RAVDIWSLGCVLVEMSSGKRPW------AEYDSNYQ-IMFKVGMGETPTIPESLSDEGQA 241
+VD W+LG ++ EM +G+ P+ D N + +F+V + + IP SLS + +
Sbjct: 232 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAAS 291
Query: 242 FAELCLRHDPAQR-----ATIFELLQ-HPFL 266
+ L DP +R T F +Q HPF
Sbjct: 292 VLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 9/77 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +EG+ +KL D+G + PG+ F GT Y+APE+ + +G +V
Sbjct: 183 NVLLDSEGH-IKLTDYG----MCKEGLRPGDTTSTFCGTPNYIAPEILRGED---YGFSV 234
Query: 369 DIWSLGCVLVEMSSGKT 385
D W+LG ++ EM +G++
Sbjct: 235 DWWALGVLMFEMMAGRS 251
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 13/259 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG V+ TG A K + ++D V+ E++ + + LV +
Sbjct: 166 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLRHPTLVNLHDA 222
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
EMV+ E + G L V + + E Y +Q+ + +HEN VH D+K
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 282
Query: 131 SANI-FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
NI F T N LKL DFG ++AH + GT + APEV + VG+
Sbjct: 283 PENIMFTTKRSNELKLIDFG----LTAHLDPKQSVKVTTGTAEFAAPEV-AEGKPVGY-- 335
Query: 190 AVDIWSLGCVLVEMSSGKRPWA--EYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+WS+G + + SG P+ D + + + +S++G+ F L
Sbjct: 336 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLL 395
Query: 248 RHDPAQRATIFELLQHPFL 266
DP R TI + L+HP+L
Sbjct: 396 LADPNTRMTIHQALEHPWL 414
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 311 IFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDI 370
+F T N LKL DFG ++AH + GT + APEV + VG+ D+
Sbjct: 287 MFTTKRSNELKLIDFG----LTAHLDPKQSVKVTTGTAEFAAPEV-AEGKPVGY--YTDM 339
Query: 371 WSLGCVLVEMSSGKTNLSG 389
WS+G + + SG + G
Sbjct: 340 WSVGVLSYILLSGLSPFGG 358
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 53/298 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK---Y 67
GQG FG V TG VA+K++ D RF L ++ L ++ N+V+ Y
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVI----QDPRFRNRELQIMQDLAVLHHPNIVQLQSY 87
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTED------GLPEVLVRRYTKQLVDAISALHE 121
+ R+ +++ + E ++L + + P +L++ + QL+ +I LH
Sbjct: 88 FYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL 147
Query: 122 NTI--VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEV 178
++ HRDIK N+ + +LKL DFGSA K+S P E N ++ ++ Y APE+
Sbjct: 148 PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-----PSEPNVAYICSRYYRAPEL 202
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPT-------- 230
+ AVDIWS+GC+ EM G+ + +S Q+ V + P+
Sbjct: 203 IFGNQH--YTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLN 260
Query: 231 -------------IP-------ESLSDEGQAFAELC--LRHDPAQRATIFELLQHPFL 266
IP SL D +A+ L L++ P +R +E L HP+
Sbjct: 261 PSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + +LKL DFGSA K+S P E N ++ ++ Y APE+ + AV
Sbjct: 161 NVLVNEADGTLKLCDFGSAKKLS-----PSEPNVAYICSRYYRAPELIFGNQH--YTTAV 213
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+ EM G+ G
Sbjct: 214 DIWSVGCIFAEMMLGEPIFRG 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 123/270 (45%), Gaps = 31/270 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ--LHKQNDARFVKDMLVELRILE-GINQKNLVKY 67
G+G FGKV A ETG+L A+K ++ + Q+D V+ + E RIL N L +
Sbjct: 32 GKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDD--VECTMTEKRILSLARNHPFLTQL 89
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ + + ME G L +Q + E R Y +++ A+ LH+ I++R
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGIIYR 148
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-----FVGTQAYMAPEVFMDT 182
D+K N+ L EG+ KL DFG + G NG F GT Y+APE+
Sbjct: 149 DLKLDNVLLDHEGHC-KLADFGMCKE--------GICNGVTTATFCGTPDYIAPEIL--- 196
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAF 242
++ +G AVD W++G +L EM G P+ N +F+ + + P L ++
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAPFEA--ENEDDLFEAILNDEVVYPTWLHEDATGI 254
Query: 243 AELCLRHDPAQRATIF------ELLQHPFL 266
+ + +P R +L+HPF
Sbjct: 255 LKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 17/79 (21%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG-----FVGTQAYMAPEVFMDTNKVGH 364
N+ L EG+ KL DFG + G NG F GT Y+APE+ ++ +
Sbjct: 154 NVLLDHEGHC-KLADFGMCKE--------GICNGVTTATFCGTPDYIAPEIL---QEMLY 201
Query: 365 GRAVDIWSLGCVLVEMSSG 383
G AVD W++G +L EM G
Sbjct: 202 GPAVDWWAMGVLLYEMLCG 220
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 12/254 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FGKV + TG VA+K + K V + E++ L+ +++K Y V
Sbjct: 25 GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
++ + ME + G L + L E RR +Q++ + H + +VHRD+K
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLK 143
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ L A N+ K+ DFG + +S GE L G+ Y APEV + ++ G
Sbjct: 144 PENVLLDAHMNA-KIADFGLSNMMSD-----GEFLRXSCGSPNYAAPEVI--SGRLYAGP 195
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRH 249
VDIWS G +L + G P+ D + +FK P+ L+ + + L+
Sbjct: 196 EVDIWSSGVILYALLCGTLPFD--DDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQV 253
Query: 250 DPAQRATIFELLQH 263
DP +RATI ++ +H
Sbjct: 254 DPMKRATIKDIREH 267
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L A N+ K+ DFG + +S GE L G+ Y APEV + ++ G V
Sbjct: 146 NVLLDAHMNA-KIADFGLSNMMSD-----GEFLRXSCGSPNYAAPEVI--SGRLYAGPEV 197
Query: 369 DIWSLGCVLVEMSSG 383
DIWS G +L + G
Sbjct: 198 DIWSSGVILYALLCG 212
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 13/259 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG V+ TG A K + ++D V+ E++ + + LV +
Sbjct: 60 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLRHPTLVNLHDA 116
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
EMV+ E + G L V + + E Y +Q+ + +HEN VH D+K
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 176
Query: 131 SANI-FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
NI F T N LKL DFG ++AH + GT + APEV + VG+
Sbjct: 177 PENIMFTTKRSNELKLIDFG----LTAHLDPKQSVKVTTGTAEFAAPEV-AEGKPVGY-- 229
Query: 190 AVDIWSLGCVLVEMSSGKRPWA--EYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+WS+G + + SG P+ D + + + +S++G+ F L
Sbjct: 230 YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLL 289
Query: 248 RHDPAQRATIFELLQHPFL 266
DP R TI + L+HP+L
Sbjct: 290 LADPNTRMTIHQALEHPWL 308
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 311 IFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDI 370
+F T N LKL DFG ++AH + GT + APEV + VG+ D+
Sbjct: 181 MFTTKRSNELKLIDFG----LTAHLDPKQSVKVTTGTAEFAAPEV-AEGKPVGY--YTDM 233
Query: 371 WSLGCVLVEMSSGKTNLSG 389
WS+G + + SG + G
Sbjct: 234 WSVGVLSYILLSGLSPFGG 252
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 108/205 (52%), Gaps = 14/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK---EIQLHKQNDARFVKDMLVELRILEGINQKNLVK- 66
G+G FG+V + T ++ AMK + ++ K++D+ F + E I+ N +V+
Sbjct: 78 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWVVQL 134
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
+Y + R + + ME G L +L+ + + +PE R YT ++V A+ A+H +H
Sbjct: 135 FYAFQDDRY-LYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIHSMGFIH 191
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K N+ L G+ LKL DFG+ +K++ V + VGT Y++PEV G
Sbjct: 192 RDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVLKSQGGDG 248
Query: 187 -HGRAVDIWSLGCVLVEMSSGKRPW 210
+GR D WS+G L EM G P+
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTPF 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH-GRAV 368
N+ L G+ LKL DFG+ +K++ V + VGT Y++PEV G+ GR
Sbjct: 198 NMLLDKSGH-LKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVLKSQGGDGYYGREC 254
Query: 369 DIWSLGCVLVEMSSGKT 385
D WS+G L EM G T
Sbjct: 255 DWWSVGVFLYEMLVGDT 271
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 108/205 (52%), Gaps = 14/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK---EIQLHKQNDARFVKDMLVELRILEGINQKNLVK- 66
G+G FG+V + T ++ AMK + ++ K++D+ F + E I+ N +V+
Sbjct: 83 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWVVQL 139
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
+Y + R + + ME G L +L+ + + +PE R YT ++V A+ A+H +H
Sbjct: 140 FYAFQDDRY-LYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIHSMGFIH 196
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K N+ L G+ LKL DFG+ +K++ V + VGT Y++PEV G
Sbjct: 197 RDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVLKSQGGDG 253
Query: 187 -HGRAVDIWSLGCVLVEMSSGKRPW 210
+GR D WS+G L EM G P+
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPF 278
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH-GRAV 368
N+ L G+ LKL DFG+ +K++ V + VGT Y++PEV G+ GR
Sbjct: 203 NMLLDKSGH-LKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVLKSQGGDGYYGREC 259
Query: 369 DIWSLGCVLVEMSSGKT 385
D WS+G L EM G T
Sbjct: 260 DWWSVGVFLYEMLVGDT 276
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 108/205 (52%), Gaps = 14/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK---EIQLHKQNDARFVKDMLVELRILEGINQKNLVK- 66
G+G FG+V + T ++ AMK + ++ K++D+ F + E I+ N +V+
Sbjct: 83 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWVVQL 139
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
+Y + R + + ME G L +L+ + + +PE R YT ++V A+ A+H +H
Sbjct: 140 FYAFQDDRY-LYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIHSMGFIH 196
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K N+ L G+ LKL DFG+ +K++ V + VGT Y++PEV G
Sbjct: 197 RDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVLKSQGGDG 253
Query: 187 -HGRAVDIWSLGCVLVEMSSGKRPW 210
+GR D WS+G L EM G P+
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPF 278
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH-GRAV 368
N+ L G+ LKL DFG+ +K++ V + VGT Y++PEV G+ GR
Sbjct: 203 NMLLDKSGH-LKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVLKSQGGDGYYGREC 259
Query: 369 DIWSLGCVLVEMSSGKT 385
D WS+G L EM G T
Sbjct: 260 DWWSVGVFLYEMLVGDT 276
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 24/264 (9%)
Query: 11 GQGRFGKVYTAVNNET----GELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G +GKV +++ET + K+ N VK E+++L + KN+++
Sbjct: 14 GEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKK---EIQLLRRLRHKNVIQ 70
Query: 67 YYGVEIHREE--MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
V + E+ M + ME C G E L E P Y QL+D + LH I
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI 130
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF--MDT 182
VH+DIK N+ LT G +LK+ G A + G+ A+ PE+ +DT
Sbjct: 131 VHKDIKPGNLLLTT-GGTLKISALGVAEALHPFAA-DDTCRTSQGSPAFQPPEIANGLDT 188
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAF 242
G VDIWS G L +++G P+ E D+ Y++ +G G IP D G
Sbjct: 189 FS---GFKVDIWSAGVTLYNITTGLYPF-EGDNIYKLFENIGKGSY-AIP---GDCGPPL 240
Query: 243 AELC---LRHDPAQRATIFELLQH 263
++L L ++PA+R +I ++ QH
Sbjct: 241 SDLLKGMLEYEPAKRFSIRQIRQH 264
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 151/358 (42%), Gaps = 35/358 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V TG++ A K+++ + + L E +ILE +N + +V
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYA 252
Query: 71 EIHREEMVLFMELCTEGTLE-SLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
++ + L + L G L+ + + G PE Y ++ + LH IV+RD+
Sbjct: 253 YETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDL 312
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K NI L G+ +++ D G AV + T+ G VGT YMAPEV + +
Sbjct: 313 KPENILLDDHGH-IRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEVVKNER---YTF 364
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQI-MFKVGMGETP-TIPESLSDEGQAFAELCL 247
+ D W+LGC+L EM +G+ P+ + + + + E P E S + ++ L
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLL 424
Query: 248 RHDPAQR-----ATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGIVLPPMSEDS 302
DPA+R + E+ +HP + L G++ PP D
Sbjct: 425 CKDPAERLGCRGGSAREVKEHPLF---------------KKLNFKRLGAGMLEPPFKPDP 469
Query: 303 VKVYARANI----FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 356
+Y + + F T +G L+ D K + + N V T+ + VF
Sbjct: 470 QAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVF 527
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L G+ +++ D G AV + T+ G VGT YMAPEV + + + D
Sbjct: 316 NILLDDHGH-IRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEVVKNER---YTFSPD 367
Query: 370 IWSLGCVLVEMSSGKT 385
W+LGC+L EM +G++
Sbjct: 368 WWALGCLLYEMIAGQS 383
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 151/358 (42%), Gaps = 35/358 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V TG++ A K+++ + + L E +ILE +N + +V
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYA 252
Query: 71 EIHREEMVLFMELCTEGTLE-SLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
++ + L + L G L+ + + G PE Y ++ + LH IV+RD+
Sbjct: 253 YETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDL 312
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K NI L G+ +++ D G AV + T+ G VGT YMAPEV + +
Sbjct: 313 KPENILLDDHGH-IRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEVVKNER---YTF 364
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQI-MFKVGMGETP-TIPESLSDEGQAFAELCL 247
+ D W+LGC+L EM +G+ P+ + + + + E P E S + ++ L
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLL 424
Query: 248 RHDPAQR-----ATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGIVLPPMSEDS 302
DPA+R + E+ +HP + L G++ PP D
Sbjct: 425 CKDPAERLGCRGGSAREVKEHPLF---------------KKLNFKRLGAGMLEPPFKPDP 469
Query: 303 VKVYARANI----FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 356
+Y + + F T +G L+ D K + + N V T+ + VF
Sbjct: 470 QAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVF 527
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L G+ +++ D G AV + T+ G VGT YMAPEV + + + D
Sbjct: 316 NILLDDHGH-IRISDLGLAVHVPEGQTIKGR----VGTVGYMAPEVVKNER---YTFSPD 367
Query: 370 IWSLGCVLVEMSSGKT 385
W+LGC+L EM +G++
Sbjct: 368 WWALGCLLYEMIAGQS 383
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 77 MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFL 136
M L +L +G L + + + L E R + L++A+S LH N IVHRD+K NI L
Sbjct: 175 MFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL 233
Query: 137 TAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVF---MDTNKVGHGRAVD 192
+ ++L DFG + + PGE L GT Y+APE+ MD G+G+ VD
Sbjct: 234 D-DNMQIRLSDFGFSCHLE-----PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVD 287
Query: 193 IWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGM-GETPTIPESLSDEGQAFAEL---CLR 248
+W+ G +L + +G P+ + +M ++ M G+ D +L L+
Sbjct: 288 LWACGVILFTLLAGSPPF--WHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQ 345
Query: 249 HDPAQRATIFELLQHPFL 266
DP R T + LQHPF
Sbjct: 346 VDPEARLTAEQALQHPFF 363
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVF---MDTNKVGHG 365
NI L + ++L DFG + + PGE L GT Y+APE+ MD G+G
Sbjct: 230 NILLD-DNMQIRLSDFGFSCHLE-----PGEKLRELCGTPGYLAPEILKCSMDETHPGYG 283
Query: 366 RAVDIWSLGCVLVEMSSG 383
+ VD+W+ G +L + +G
Sbjct: 284 KEVDLWACGVILFTLLAG 301
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 71 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 130
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 131 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 190 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 239
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 297
Query: 251 PAQR 254
+R
Sbjct: 298 LTKR 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 192 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 241
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 242 WWALGVLIYEMAAG 255
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 161
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 162 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 211
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 269
Query: 251 PAQR 254
+R
Sbjct: 270 LTKR 273
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 164 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 213
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 214 WWALGVLIYEMAAG 227
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 161
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 162 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 211
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 269
Query: 251 PAQR 254
+R
Sbjct: 270 LTKR 273
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 164 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 213
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 214 WWALGVLIYEMAAG 227
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 129/293 (44%), Gaps = 39/293 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
GQG FG+V A N A+K+I+ ++ + +L E+ +L +N + +V+YY
Sbjct: 15 GQGAFGQVVKARNALDSRYYAIKKIRHTEEK----LSTILSEVXLLASLNHQYVVRYYAA 70
Query: 71 EIHREEMV-----------LFM--ELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
+ R V LF+ E C TL L+ S R +Q+++A+S
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV--------PG---ELNG 166
+H I+HR++K NIF+ E ++K+GDFG A + + PG L
Sbjct: 131 YIHSQGIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 167 FVGTQAYMAPEVFMDTNKVGH-GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFK--- 222
+GT Y+A EV T GH +D +SLG + E P++ I+ K
Sbjct: 190 AIGTAXYVATEVLDGT---GHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRS 243
Query: 223 VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVC 275
V + P ++ + L + HDP +R LL +L V +++V
Sbjct: 244 VSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVI 296
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 16/82 (19%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTV--------PG---ELNGFVGTQAYMAPEVFMD 358
NIF+ E ++K+GDFG A + + PG L +GT Y+A EV
Sbjct: 146 NIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDG 204
Query: 359 TNKVGH-GRAVDIWSLGCVLVE 379
T GH +D +SLG + E
Sbjct: 205 T---GHYNEKIDXYSLGIIFFE 223
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLMIDQQG-YIKVTDFGLAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLMIDQQG-YIKVTDFGLAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 129/269 (47%), Gaps = 15/269 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V + TG+ A+K I + + +L E+++L+ ++ N+ K Y
Sbjct: 35 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEF 94
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L E+ T G L + S + EV R +Q++ I+ H+N IVHRD+K
Sbjct: 95 FEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYXHKNKIVHRDLK 153
Query: 131 SANIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ L ++ ++++ DFG +S H + +GT Y+APEV T +
Sbjct: 154 PENLLLESKSKDANIRIIDFG----LSTHFEASKKXKDKIGTAYYIAPEVLHGT----YD 205
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPE--SLSDEGQAFAEL 245
D+WS G +L + SG P+ + Y I+ KV G+ T +P+ +S+ +
Sbjct: 206 EKCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 246 CLRHDPAQRATIFELLQHPFLIVSCEEDV 274
L + P+ R + + L H ++ +E +
Sbjct: 265 XLTYVPSXRISARDALDHEWIQTYTKEQI 293
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 310 NIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ ++++ DFG +S H + +GT Y+APEV T +
Sbjct: 156 NLLLESKSKDANIRIIDFG----LSTHFEASKKXKDKIGTAYYIAPEVLHGT----YDEK 207
Query: 368 VDIWSLGCVLVEMSSG 383
D+WS G +L + SG
Sbjct: 208 CDVWSTGVILYILLSG 223
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 71
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGME 131
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 132 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 185
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 186 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 227
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK---EIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G FG+V + + ++ AMK + ++ K++D+ F + E I+ N +V+
Sbjct: 84 GRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWE---ERDIMAFANSPWVVQL 140
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ + + + ME G L +L+ + + +PE + YT ++V A+ A+H ++HR
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWAKFYTAEVVLALDAIHSMGLIHR 198
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG- 186
D+K N+ L G+ LKL DFG+ +K+ V + VGT Y++PEV G
Sbjct: 199 DVKPDNMLLDKHGH-LKLADFGTCMKMDETGMV--HCDTAVGTPDYISPEVLKSQGGDGY 255
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKV-GMGETPTIPESLSDEGQAFAEL 245
+GR D WS+G L EM G P+ DS K+ + PE A +
Sbjct: 256 YGRECDWWSVGVFLFEMLVGDTPFYA-DSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLI 314
Query: 246 CL----RHDPAQRATIFELLQHPFL 266
C R R + E+ QHPF
Sbjct: 315 CAFLTDREVRLGRNGVEEIKQHPFF 339
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH-GRAV 368
N+ L G+ LKL DFG+ +K+ V + VGT Y++PEV G+ GR
Sbjct: 204 NMLLDKHGH-LKLADFGTCMKMDETGMV--HCDTAVGTPDYISPEVLKSQGGDGYYGREC 260
Query: 369 DIWSLGCVLVEMSSGKT 385
D WS+G L EM G T
Sbjct: 261 DWWSVGVFLFEMLVGDT 277
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 24/261 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AV T A K+I + D K E+ I++ ++ N+++ Y
Sbjct: 18 GRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ---EIEIMKSLDHPNIIRLYET 74
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
++ L MELCT G L E +V + E R K ++ A++ H+ + HRD+
Sbjct: 75 FEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDL 132
Query: 130 KSAN-IFLTAEGNS-LKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVG 186
K N +FLT +S LKL DFG A + PG+ + VGT Y++P+V
Sbjct: 133 KPENFLFLTDSPDSPLKLIDFGLAARFK-----PGKMMRTKVGTPYYVSPQVLEGL---- 183
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE----SLSDEGQAF 242
+G D WS G ++ + G P++ ++ ++M K+ G T T PE ++S + ++
Sbjct: 184 YGPECDEWSAGVMMYVLLCGYPPFSA-PTDXEVMLKIREG-TFTFPEKDWLNVSPQAESL 241
Query: 243 AELCLRHDPAQRATIFELLQH 263
L P QR T + L+H
Sbjct: 242 IRRLLTKSPKQRITSLQALEH 262
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 75
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 76 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 135
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 136 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 189
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 190 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 231
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 66
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 67 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 126
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 127 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 180
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 181 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 222
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 74
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 75 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 134
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 135 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 188
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 189 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 72
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 73 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 132
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 133 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 186
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 187 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 228
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ + N+VK
Sbjct: 50 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 67 YYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y GV R + L ME G+L +Q ++ + + + +YT Q+ + L
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 166
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
+HRD+ + NI + E N +K+GDFG K PGE F + APE
Sbjct: 167 IHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-----WYAPESL 220
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
++ A D+WS G VL E+ K P AE+
Sbjct: 221 TESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 255
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 73
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 74 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 133
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 134 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 187
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 188 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 229
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 24/261 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G+V AV T A K+I + D K E+ I++ ++ N+++ Y
Sbjct: 35 GRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ---EIEIMKSLDHPNIIRLYET 91
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
++ L MELCT G L E +V + E R K ++ A++ H+ + HRD+
Sbjct: 92 FEDNTDIYLVMELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDL 149
Query: 130 KSAN-IFLTAEGNS-LKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVG 186
K N +FLT +S LKL DFG A + PG+ + VGT Y++P+V
Sbjct: 150 KPENFLFLTDSPDSPLKLIDFGLAARFK-----PGKMMRTKVGTPYYVSPQVLEGL---- 200
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE----SLSDEGQAF 242
+G D WS G ++ + G P++ ++ ++M K+ G T T PE ++S + ++
Sbjct: 201 YGPECDEWSAGVMMYVLLCGYPPFSA-PTDXEVMLKIREG-TFTFPEKDWLNVSPQAESL 258
Query: 243 AELCLRHDPAQRATIFELLQH 263
L P QR T + L+H
Sbjct: 259 IRRLLTKSPKQRITSLQALEH 279
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 68
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 128
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 129 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 182
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 183 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 224
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 36 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 95
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 96 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 154
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 155 PENLLIDQQG-YIQVTDFGFAKRVKGRTWT------LCGTPEYLAPEIILSK---GYNKA 204
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 205 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 262
Query: 251 PAQR 254
+R
Sbjct: 263 LTKR 266
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 157 NLLIDQQG-YIQVTDFGFAKRVKGRTWT------LCGTPEYLAPEIILSK---GYNKAVD 206
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 207 WWALGVLIYEMAAG 220
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 71
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 131
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 132 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 185
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 186 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 227
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 40/284 (14%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 86
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 87 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 146
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 147 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 200
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY------DSNYQ-IMF 221
+ APE ++ A D+WS G VL E+ K P AE+ D Q I+F
Sbjct: 201 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 257
Query: 222 KV-----GMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFEL 260
+ G P P+ DE C ++ QR + +L
Sbjct: 258 HLIELLKNNGRLPR-PDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 40/284 (14%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 86
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 87 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 146
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 147 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 200
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY------DSNYQ-IMF 221
+ APE ++ A D+WS G VL E+ K P AE+ D Q I+F
Sbjct: 201 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 257
Query: 222 KV-----GMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFEL 260
+ G P P+ DE C ++ QR + +L
Sbjct: 258 HLIELLKNNGRLPR-PDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 22/333 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V V G+ A I K+ AR + + E RI + N+V+ +
Sbjct: 20 GKGAFSVVRRCVKVLAGQEYAAMIINT-KKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
L +L T G L E +V + E +Q+++A+ H+ +VHR++
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIV--AREYYSEADASHCIQQILEAVLHCHQMGVVHRNL 136
Query: 130 KSANIFLTAE--GNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L ++ G ++KL DFG A+++ GF GT Y++PEV K +
Sbjct: 137 KPENLLLASKLKGAAVKLADFGLAIEVEGEQQA---WFGFAGTPGYLSPEVL---RKDPY 190
Query: 188 GRAVDIWSLGCVLVEMSSGKRP-WAEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
G+ VD+W+ G +L + G P W E K G + P+ PE +++ E +
Sbjct: 191 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS-PEWDTVTPEAKDLIN 249
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDY-----LKLGIVLPPMS 299
L +P++R T E L+HP++ C R L+ + LK I+ ++
Sbjct: 250 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLA 309
Query: 300 EDSVKVYARANIFLTAEG-NSLKLGDFGSAVKI 331
+ V + I +T + ++ GDF S K+
Sbjct: 310 TRNFSVRKQEIIKVTEQLIEAISNGDFESYTKM 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 310 NIFLTAE--GNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ L ++ G ++KL DFG A+++ GF GT Y++PEV K +G+
Sbjct: 140 NLLLASKLKGAAVKLADFGLAIEVEGEQQA---WFGFAGTPGYLSPEVL---RKDPYGKP 193
Query: 368 VDIWSLGCVL 377
VD+W+ G +L
Sbjct: 194 VDLWACGVIL 203
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 67
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 68 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 127
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 128 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 181
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 182 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 223
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 68
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 69 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 128
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 129 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 182
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 183 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLLIDQQG-YIQVTDFGFAKRVKGRTWT------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLLIDQQG-YIQVTDFGFAKRVKGRTWT------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 121/267 (45%), Gaps = 30/267 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G VY T + A+K L K D + V+ E+ +L ++ N++K +
Sbjct: 62 GRGATSIVYRCKQKGTQKPYALK--VLKKTVDKKIVR---TEIGVLLRLSHPNIIKLKEI 116
Query: 71 EIHREEMVLFMELCTEGTL-----ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
E+ L +EL T G L E S D V KQ+++A++ LHEN IV
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV------KQILEAVAYLHENGIV 170
Query: 126 HRDIKSANIFLT--AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
HRD+K N+ A LK+ DFG + KI H + + GT Y APE+
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLS-KIVEHQVL---MKTVCGTPGYCAPEIL---R 223
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFA 243
+G VD+WS+G + + G P+ + + Q MF+ + DE A
Sbjct: 224 GCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-QFMFRRILNCEYYFISPWWDEVSLNA 282
Query: 244 ELCLRH----DPAQRATIFELLQHPFL 266
+ +R DP +R T F+ LQHP++
Sbjct: 283 KDLVRKLIVLDPKKRLTTFQALQHPWV 309
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 18/222 (8%)
Query: 52 ELRILEGINQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYT 109
E+ IL+ ++ N+VK V + + + + + EL +G + + T L E R Y
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLSEDQARFYF 143
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
+ L+ I LH I+HRDIK +N+ + +G+ +K+ DFG + + + L+ VG
Sbjct: 144 QDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH-IKIADFGVSNEFKGSDAL---LSNTVG 199
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIM-----FKVG 224
T A+MAPE +T K+ G+A+D+W++G L G+ P+ + +IM K
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM----DERIMCLHSKIKSQ 255
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
E P P+ D + L +P R + E+ HP++
Sbjct: 256 ALEFPDQPDIAEDLKDLITRM-LDKNPESRIVVPEIKLHPWV 296
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 253 QRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGIV-----LPPMSEDSVKVYA 307
Q I + L HP +V E + +P ++ + + G V L P+SED + Y
Sbjct: 85 QEIAILKKLDHPN-VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYF 143
Query: 308 RANI--------------------FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGT 347
+ I L E +K+ DFG + + + L+ VGT
Sbjct: 144 QDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL---LSNTVGT 200
Query: 348 QAYMAPEVFMDTNKVGHGRAVDIWSLGCVL 377
A+MAPE +T K+ G+A+D+W++G L
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 22/206 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNL-VKYYG 69
G+G FG+V A + E VA+K I+ N F+ +E+R+LE +N+ + +KYY
Sbjct: 63 GKGSFGQVVKAYDRVEQEWVAIKIIK----NKKAFLNQAQIEVRLLELMNKHDTEMKYYI 118
Query: 70 VEIHREEM-----VLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS--ALHEN 122
V + R M L E+ + + L + G+ L R++ +Q+ A+ A E
Sbjct: 119 VHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL 178
Query: 123 TIVHRDIKSANIFL-TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMD 181
+I+H D+K NI L + +++K+ DFGS+ ++ + + ++ Y +PEV +
Sbjct: 179 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ------RIYQXIQSRFYRSPEVLLG 232
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ + A+D+WSLGC+LVEM +G+
Sbjct: 233 ---MPYDLAIDMWSLGCILVEMHTGE 255
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 310 NIFL-TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
NI L + +++K+ DFGS+ ++ + + ++ Y +PEV + + + A+
Sbjct: 189 NILLCNPKRSAIKIVDFGSSCQLGQ------RIYQXIQSRFYRSPEVLLG---MPYDLAI 239
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WSLGC+LVEM +G+ SG
Sbjct: 240 DMWSLGCILVEMHTGEPLFSG 260
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LAGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LAGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 71
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q+ + + + + +YT Q+ +
Sbjct: 72 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGME 131
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HRD+ + NI + E N +K+GDFG K PGE F
Sbjct: 132 YLGTKRYIHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF----- 185
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 186 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 227
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDAR--FVKDMLVELRILEGINQKNLVKYY 68
G+G+F VY A + T ++VA+K+I+L +++A+ + L E+++L+ ++ N++
Sbjct: 19 GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL 78
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
H+ + L + E LE +++ L ++ Y + + LH++ I+HRD
Sbjct: 79 DAFGHKSNISLVFDF-METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD 137
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K N+ L G LKL DFG A + V T+ Y APE+ G G
Sbjct: 138 LKPNNLLLDENG-VLKLADFGLAKSFGSPNRA---YXHQVVTRWYRAPELLFGARMYGVG 193
Query: 189 RAVDIWSLGCVLVEM 203
VD+W++GC+L E+
Sbjct: 194 --VDMWAVGCILAEL 206
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 308 RANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
+ N L E LKL DFG A + V T+ Y APE+ G G
Sbjct: 139 KPNNLLLDENGVLKLADFGLAKSFGSPNRA---YXHQVVTRWYRAPELLFGARMYGVG-- 193
Query: 368 VDIWSLGCVLVEM 380
VD+W++GC+L E+
Sbjct: 194 VDMWAVGCILAEL 206
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEI--QLHKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G G FG V ++ +TGE VA+K+ +L +N R+ +E++I++ +N N+V
Sbjct: 23 GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC----LEIQIMKKLNHPNVVSAR 78
Query: 69 GVEIHREEM------VLFMELCTEGTLESLVQSTED--GLPEVLVRRYTKQLVDAISALH 120
V +++ +L ME C G L + E+ GL E +R + A+ LH
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 121 ENTIVHRDIKSANIFLTAEGNSL--KLGDFGSAVKISAHTTVPGEL-NGFVGTQAYMAPE 177
EN I+HRD+K NI L L K+ D G A ++ GEL FVGT Y+APE
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ-----GELCTEFVGTLQYLAPE 193
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPW 210
+ + + VD WS G + E +G RP+
Sbjct: 194 LL---EQKKYTVTVDYWSFGTLAFECITGFRPF 223
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 321 KLGDFGSAVKISAHTTVPGEL-NGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
K+ D G A ++ GEL FVGT Y+APE+ + + VD WS G + E
Sbjct: 164 KIIDLGYAKELDQ-----GELCTEFVGTLQYLAPELL---EQKKYTVTVDYWSFGTLAFE 215
Query: 380 MSSG 383
+G
Sbjct: 216 CITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEI--QLHKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G G FG V ++ +TGE VA+K+ +L +N R+ +E++I++ +N N+V
Sbjct: 24 GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC----LEIQIMKKLNHPNVVSAR 79
Query: 69 GVEIHREEM------VLFMELCTEGTLESLVQSTED--GLPEVLVRRYTKQLVDAISALH 120
V +++ +L ME C G L + E+ GL E +R + A+ LH
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 139
Query: 121 ENTIVHRDIKSANIFLTAEGNSL--KLGDFGSAVKISAHTTVPGEL-NGFVGTQAYMAPE 177
EN I+HRD+K NI L L K+ D G A ++ GEL FVGT Y+APE
Sbjct: 140 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ-----GELCTEFVGTLQYLAPE 194
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPW 210
+ + + VD WS G + E +G RP+
Sbjct: 195 LL---EQKKYTVTVDYWSFGTLAFECITGFRPF 224
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 321 KLGDFGSAVKISAHTTVPGEL-NGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
K+ D G A ++ GEL FVGT Y+APE+ + + VD WS G + E
Sbjct: 165 KIIDLGYAKELDQ-----GELCTEFVGTLQYLAPELL---EQKKYTVTVDYWSFGTLAFE 216
Query: 380 MSSG 383
+G
Sbjct: 217 CITG 220
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 22/206 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNL-VKYYG 69
G+G FG+V A + E VA+K I+ N F+ +E+R+LE +N+ + +KYY
Sbjct: 44 GKGSFGQVVKAYDRVEQEWVAIKIIK----NKKAFLNQAQIEVRLLELMNKHDTEMKYYI 99
Query: 70 VEIHREEM-----VLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS--ALHEN 122
V + R M L E+ + + L + G+ L R++ +Q+ A+ A E
Sbjct: 100 VHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL 159
Query: 123 TIVHRDIKSANIFL-TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMD 181
+I+H D+K NI L + +++K+ DFGS+ ++ + + ++ Y +PEV +
Sbjct: 160 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ------RIYQXIQSRFYRSPEVLLG 213
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ + A+D+WSLGC+LVEM +G+
Sbjct: 214 ---MPYDLAIDMWSLGCILVEMHTGE 236
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 310 NIFL-TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
NI L + +++K+ DFGS+ ++ + + ++ Y +PEV + + + A+
Sbjct: 170 NILLCNPKRSAIKIVDFGSSCQLGQ------RIYQXIQSRFYRSPEVLLG---MPYDLAI 220
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WSLGC+LVEM +G+ SG
Sbjct: 221 DMWSLGCILVEMHTGEPLFSG 241
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 71 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 130
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 190 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 239
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 297
Query: 251 PAQR 254
+R
Sbjct: 298 LTKR 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 192 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 241
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 242 WWALGVLIYEMAAG 255
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLMIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLMIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ + N+VK
Sbjct: 19 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 67 YYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y GV R + L ME G+L +Q ++ + + + +YT Q+ + L
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV-----PGELNGFVGTQAYMAPEVF 179
+HRD+ + NI + E N +K+GDFG + PGE F + APE
Sbjct: 136 IHRDLATRNILVENE-NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF-----WYAPESL 189
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
++ A D+WS G VL E+ K P AE+
Sbjct: 190 TESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 224
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 51 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 59/311 (18%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V + +G ++A K I L + R ++ EL++L N +V +YG
Sbjct: 25 GAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIR--NQIIRELQVLHECNSPYIVGFYGA 82
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE-NTIVHRDI 129
E+ + ME G+L+ +++ + +PE ++ + + ++ ++ L E + I+HRD+
Sbjct: 83 FYSDGEISICMEHMDGGSLDQVLKEAKR-IPEEILGKVSIAVLRGLAYLREKHQIMHRDV 141
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K +NI + + G +KL DFG + ++ + N FVGT++YMAPE T+ +
Sbjct: 142 KPSNILVNSRG-EIKLCDFGVSGQL-----IDSMANSFVGTRSYMAPERLQGTH---YSV 192
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSN--------------------------------- 216
DIWS+G LVE++ G+ P D+
Sbjct: 193 QSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVS 252
Query: 217 ------------YQIMFKVGMGETPTIPESL-SDEGQAFAELCLRHDPAQRATIFELLQH 263
++++ + P +P + + + Q F CL +PA+RA + L H
Sbjct: 253 GHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLTNH 312
Query: 264 PFLIVSCEEDV 274
F+ S E+V
Sbjct: 313 TFIKRSEVEEV 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 9/76 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + + G +KL DFG + ++ + N FVGT++YMAPE T+ +
Sbjct: 144 SNILVNSRG-EIKLCDFGVSGQL-----IDSMANSFVGTRSYMAPERLQGTH---YSVQS 194
Query: 369 DIWSLGCVLVEMSSGK 384
DIWS+G LVE++ G+
Sbjct: 195 DIWSMGLSLVELAVGR 210
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 37 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 96
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 97 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 155
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 156 PENLLIDEQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 205
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 206 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 263
Query: 251 PAQR 254
+R
Sbjct: 264 LTKR 267
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 313 LTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWS 372
L E +++ DFG A ++ T GT Y+APE+ + G+ +AVD W+
Sbjct: 160 LIDEQGYIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVDWWA 210
Query: 373 LGCVLVEMSSG 383
LG ++ EM++G
Sbjct: 211 LGVLIYEMAAG 221
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N L K
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N L K
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 22/263 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G F +V+ TG+L A+K I K++ A + E+ +L+ I +N+V +
Sbjct: 18 GSGAFSEVFLVKQRLTGKLFALKCI---KKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGL-PEVLVRRYTKQLVDAISALHENTIVHRDI 129
L M+L + G L + E G+ E +Q++ A+ LHEN IVHRD+
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRI--LERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDL 132
Query: 130 KSAN-IFLTAEGNS-LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N ++LT E NS + + DFG + K+ + G ++ GT Y+APEV +
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLS-KMEQN----GIMSTACGTPGYVAPEVLAQK---PY 184
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMG----ETPTIPESLSDEGQAFA 243
+AVD WS+G + + G P+ E ++ ++ K+ G E+P + +S+ + F
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYE-ETESKLFEKIKEGYYEFESP-FWDDISESAKDFI 242
Query: 244 ELCLRHDPAQRATIFELLQHPFL 266
L DP +R T + L HP++
Sbjct: 243 CHLLEKDPNERYTCEKALSHPWI 265
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Query: 311 IFLTAEGNS-LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
++LT E NS + + DFG + K+ + G ++ GT Y+APEV + +AVD
Sbjct: 138 LYLTPEENSKIMITDFGLS-KMEQN----GIMSTACGTPGYVAPEVLAQK---PYSKAVD 189
Query: 370 IWSLGCV 376
WS+G +
Sbjct: 190 CWSIGVI 196
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DEPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LXGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LXGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 86/326 (26%)
Query: 11 GQGRFGKVYTAVNNETGE-LVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN------ 63
G+G FGKV +++ G+ VA+K I+ N ++ + +E+ +L+ I +K+
Sbjct: 28 GEGTFGKVVECLDHARGKSQVALKIIR----NVGKYREAARLEINVLKKIKEKDKENKFL 83
Query: 64 ---LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
+ ++ H M + EL + T E L ++ P VR QL A+ LH
Sbjct: 84 CVLMSDWFNFHGH---MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 140
Query: 121 ENTIVHRDIKSANIFL------------------TAEGNSLKLGDFGSAVKISAHTTVPG 162
EN + H D+K NI + + S+++ DFGSA H T
Sbjct: 141 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTT-- 198
Query: 163 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMF 221
V T+ Y PEV ++ +G + D+WS+GC+L E G + +++ + +M
Sbjct: 199 ----IVATRHYRPPEVILE---LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251
Query: 222 KVGMGETPT-----------------IPESLSDEGQAFAELC------------------ 246
+ +G P+ + + S +G+ E C
Sbjct: 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLF 311
Query: 247 ------LRHDPAQRATIFELLQHPFL 266
L DPAQR T+ E L HPF
Sbjct: 312 DLMRRMLEFDPAQRITLAEALLHPFF 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 314 TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSL 373
+ + S+++ DFGSA H T V T+ Y PEV ++ +G + D+WS+
Sbjct: 175 SVKNTSIRVADFGSATFDHEHHTT------IVATRHYRPPEVILE---LGWAQPCDVWSI 225
Query: 374 GCVLVEMSSGKT 385
GC+L E G T
Sbjct: 226 GCILFEYYRGFT 237
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 86/326 (26%)
Query: 11 GQGRFGKVYTAVNNETGE-LVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN------ 63
G+G FGKV +++ G+ VA+K I+ N ++ + +E+ +L+ I +K+
Sbjct: 37 GEGTFGKVVECLDHARGKSQVALKIIR----NVGKYREAARLEINVLKKIKEKDKENKFL 92
Query: 64 ---LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
+ ++ H M + EL + T E L ++ P VR QL A+ LH
Sbjct: 93 CVLMSDWFNFHGH---MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 149
Query: 121 ENTIVHRDIKSANIFL------------------TAEGNSLKLGDFGSAVKISAHTTVPG 162
EN + H D+K NI + + S+++ DFGSA H T
Sbjct: 150 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTT-- 207
Query: 163 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMF 221
V T+ Y PEV ++ +G + D+WS+GC+L E G + +++ + +M
Sbjct: 208 ----IVATRHYRPPEVILE---LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 260
Query: 222 KVGMGETPT-----------------IPESLSDEGQAFAELC------------------ 246
+ +G P+ + + S +G+ E C
Sbjct: 261 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLF 320
Query: 247 ------LRHDPAQRATIFELLQHPFL 266
L DPAQR T+ E L HPF
Sbjct: 321 DLMRRMLEFDPAQRITLAEALLHPFF 346
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 314 TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSL 373
+ + S+++ DFGSA H T V T+ Y PEV ++ +G + D+WS+
Sbjct: 184 SVKNTSIRVADFGSATFDHEHHTT------IVATRHYRPPEVILE---LGWAQPCDVWSI 234
Query: 374 GCVLVEMSSGKT 385
GC+L E G T
Sbjct: 235 GCILFEYYRGFT 246
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 71 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 130
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 189
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 190 PENLLIDQQG-YIQVTDFGFAKRVKGATWT------LCGTPEYLAPEIILSK---GYNKA 239
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 297
Query: 251 PAQR 254
+R
Sbjct: 298 LTKR 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 192 NLLIDQQG-YIQVTDFGFAKRVKGATWT------LCGTPEYLAPEIILSK---GYNKAVD 241
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 242 WWALGVLIYEMAAG 255
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 86/326 (26%)
Query: 11 GQGRFGKVYTAVNNETGE-LVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN------ 63
G+G FGKV +++ G+ VA+K I+ N ++ + +E+ +L+ I +K+
Sbjct: 60 GEGTFGKVVECLDHARGKSQVALKIIR----NVGKYREAARLEINVLKKIKEKDKENKFL 115
Query: 64 ---LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
+ ++ H M + EL + T E L ++ P VR QL A+ LH
Sbjct: 116 CVLMSDWFNFHGH---MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 172
Query: 121 ENTIVHRDIKSANIFL------------------TAEGNSLKLGDFGSAVKISAHTTVPG 162
EN + H D+K NI + + S+++ DFGSA H T
Sbjct: 173 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTT-- 230
Query: 163 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMF 221
V T+ Y PEV ++ +G + D+WS+GC+L E G + +++ + +M
Sbjct: 231 ----IVATRHYRPPEVILE---LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 283
Query: 222 KVGMGETPT-----------------IPESLSDEGQAFAELC------------------ 246
+ +G P+ + + S +G+ E C
Sbjct: 284 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLF 343
Query: 247 ------LRHDPAQRATIFELLQHPFL 266
L DPAQR T+ E L HPF
Sbjct: 344 DLMRRMLEFDPAQRITLAEALLHPFF 369
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 314 TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSL 373
+ + S+++ DFGSA H T V T+ Y PEV ++ +G + D+WS+
Sbjct: 207 SVKNTSIRVADFGSATFDHEHHTT------IVATRHYRPPEVILE---LGWAQPCDVWSI 257
Query: 374 GCVLVEMSSGKT 385
GC+L E G T
Sbjct: 258 GCILFEYYRGFT 269
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 29/248 (11%)
Query: 45 FVKDMLVELRIL-EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQS---TEDGL 100
F L+E+++L E + N+++YY E + + +ELC L+ LV+S +++ L
Sbjct: 69 FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNVSDENL 127
Query: 101 PEVLVRRYT-----KQLVDAISALHENTIVHRDIKSANIFLT------------AEGNSL 143
L + Y +Q+ ++ LH I+HRD+K NI ++ AE +
Sbjct: 128 K--LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 185
Query: 144 KLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 202
+ DFG K+ S LN GT + APE+ ++ K R++DI+S+GCV
Sbjct: 186 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYY 245
Query: 203 -MSSGKRPWAE-YDSNYQIMFKV-GMGETPTIPE-SLSDEGQAFAELCLRHDPAQRATIF 258
+S GK P+ + Y I+ + + E + + SL E + HDP +R T
Sbjct: 246 ILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAM 305
Query: 259 ELLQHPFL 266
++L+HP
Sbjct: 306 KVLRHPLF 313
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 315 AEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSL 373
AE + + DFG K+ S LN GT + APE+ ++ K R++DI+S+
Sbjct: 180 AENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSM 239
Query: 374 GCVLVE-MSSGK 384
GCV +S GK
Sbjct: 240 GCVFYYILSKGK 251
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N L K
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLMIDQQG-YIKVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLMIDQQG-YIQVTDFGLAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLMIDQQG-YIQVTDFGLAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 22/206 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNL-VKYYG 69
G+G FG+V A + E VA+K I+ N F+ +E+R+LE +N+ + +KYY
Sbjct: 63 GKGSFGQVVKAYDRVEQEWVAIKIIK----NKKAFLNQAQIEVRLLELMNKHDTEMKYYI 118
Query: 70 VEIHREEM-----VLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS--ALHEN 122
V + R M L E+ + + L + G+ L R++ +Q+ A+ A E
Sbjct: 119 VHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL 178
Query: 123 TIVHRDIKSANIFL-TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMD 181
+I+H D+K NI L + ++K+ DFGS+ ++ + + ++ Y +PEV +
Sbjct: 179 SIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ------RIYQXIQSRFYRSPEVLLG 232
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGK 207
+ + A+D+WSLGC+LVEM +G+
Sbjct: 233 ---MPYDLAIDMWSLGCILVEMHTGE 255
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Query: 310 NIFL-TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
NI L + ++K+ DFGS+ ++ + + ++ Y +PEV + + + A+
Sbjct: 189 NILLCNPKRXAIKIVDFGSSCQLGQ------RIYQXIQSRFYRSPEVLLG---MPYDLAI 239
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WSLGC+LVEM +G+ SG
Sbjct: 240 DMWSLGCILVEMHTGEPLFSG 260
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + ETG AMK + K + ++ L E RI + +N LVK
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFS 110
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + +E G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 111 FKDNSNLYMVLEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 169
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 170 PENLLIDQQG-YIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 219
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 277
Query: 251 PAQR 254
+R
Sbjct: 278 LTKR 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +K+ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 172 NLLIDQQG-YIKVADFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 221
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V + T + A+K I + + +L E+ +L+ ++ N++K + +
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ EL T G L + +++ E R KQ+ I+ +H++ IVHRD+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 130 KSANIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K NI L ++ +K+ DFG + +T ++ +GT Y+APEV T +
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVLRGT----Y 199
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMFKVGMGETP-TIPE--SLSDEGQAFA 243
D+WS G +L + SG P+ Y N Y I+ +V G+ +P+ ++SD+ +
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPF--YGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 244 ELCLRHDPAQRATIFELLQHPFL 266
L P+ R T + L+HP++
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWI 280
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI L ++ +K+ DFG + +T ++ +GT Y+APEV T +
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVLRGT----YDEK 202
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
D+WS G +L + SG G
Sbjct: 203 CDVWSAGVILYILLSGTPPFYG 224
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 117/254 (46%), Gaps = 33/254 (12%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNL------ 64
G G FG+V+ + G AMK ++ K+++V L+ +E N + L
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLK----------KEIVVRLKQVEHTNDERLMLSIVT 64
Query: 65 ----VKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
++ +G +++ + M+ G L SL++ ++ P + + Y ++ A+ LH
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH 123
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I++RD+K NI L G+ +K+ DFG A VP GT Y+APEV
Sbjct: 124 SKDIIYRDLKPENILLDKNGH-IKITDFGFA------KYVPDVTYXLCGTPDYIAPEV-- 174
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQ 240
+ + +++D WS G ++ EM +G P+ YDSN ++ + P +++ +
Sbjct: 175 -VSTKPYNKSIDWWSFGILIYEMLAGYTPF--YDSNTMKTYEKILNAELRFPPFFNEDVK 231
Query: 241 AFAELCLRHDPAQR 254
+ D +QR
Sbjct: 232 DLLSRLITRDLSQR 245
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 45 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 104
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 105 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLK 163
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 164 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 213
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 214 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 271
Query: 251 PAQR 254
+R
Sbjct: 272 LTKR 275
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 166 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 215
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 216 WWALGVLIYEMAAG 229
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V + T + A+K I + + +L E+ +L+ ++ N++K + +
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ EL T G L + +++ E R KQ+ I+ +H++ IVHRD+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 130 KSANIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K NI L ++ +K+ DFG + +T ++ +GT Y+APEV T +
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVLRGT----Y 199
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMFKVGMGETP-TIPE--SLSDEGQAFA 243
D+WS G +L + SG P+ Y N Y I+ +V G+ +P+ ++SD+ +
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPF--YGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 244 ELCLRHDPAQRATIFELLQHPFL 266
L P+ R T + L+HP++
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWI 280
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI L ++ +K+ DFG + +T ++ +GT Y+APEV T +
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVLRGT----YDEK 202
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
D+WS G +L + SG G
Sbjct: 203 CDVWSAGVILYILLSGTPPFYG 224
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 29/248 (11%)
Query: 45 FVKDMLVELRIL-EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQS---TEDGL 100
F L+E+++L E + N+++YY E + + +ELC L+ LV+S +++ L
Sbjct: 69 FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNVSDENL 127
Query: 101 PEVLVRRYT-----KQLVDAISALHENTIVHRDIKSANIFLT------------AEGNSL 143
L + Y +Q+ ++ LH I+HRD+K NI ++ AE +
Sbjct: 128 K--LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 185
Query: 144 KLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 202
+ DFG K+ S LN GT + APE+ ++ K R++DI+S+GCV
Sbjct: 186 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYY 245
Query: 203 -MSSGKRPWAE-YDSNYQIMFKV-GMGETPTIPE-SLSDEGQAFAELCLRHDPAQRATIF 258
+S GK P+ + Y I+ + + E + + SL E + HDP +R T
Sbjct: 246 ILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAM 305
Query: 259 ELLQHPFL 266
++L+HP
Sbjct: 306 KVLRHPLF 313
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 315 AEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSL 373
AE + + DFG K+ S LN GT + APE+ ++ K R++DI+S+
Sbjct: 180 AENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSM 239
Query: 374 GCVLVE-MSSGK 384
GCV +S GK
Sbjct: 240 GCVFYYILSKGK 251
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 22/205 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG V+ A E+ E+ K +Q D RF L +RI++ N +L ++
Sbjct: 49 GNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVDLKAFFYS 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQST------EDGLPEVLVRRYTKQLVDAISALHENTI 124
+++ V F+ L E E++ +++ + +P +L++ Y QL+ +++ +H I
Sbjct: 104 NGDKKDEV-FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI 162
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPE-VFMDT 182
HRDIK N+ L LKL DFGSA + A GE N + ++ Y APE +F T
Sbjct: 163 CHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA-----GEPNVSXICSRYYRAPELIFGAT 217
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGK 207
N + +DIWS GCV+ E+ G+
Sbjct: 218 N---YTTNIDIWSTGCVMAELMQGQ 239
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN-GFVGTQAYMAPE-VFMDTNKVGHGRA 367
N+ L LKL DFGSA + A GE N + ++ Y APE +F TN +
Sbjct: 171 NLLLDPPSGVLKLIDFGSAKILIA-----GEPNVSXICSRYYRAPELIFGATN---YTTN 222
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
+DIWS GCV+ E+ G+ G
Sbjct: 223 IDIWSTGCVMAELMQGQPLFPG 244
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLIIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIIISK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLIIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIIISK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 16/175 (9%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L E R+ + L++ I ALH+ IVHRD+K NI L + N +KL DFG + ++
Sbjct: 121 LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLD---- 175
Query: 160 VPGE-LNGFVGTQAYMAPEVF---MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDS 215
PGE L GT +Y+APE+ M+ N G+G+ VD+WS G ++ + +G P+ +
Sbjct: 176 -PGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF--WHR 232
Query: 216 NYQIMFKVGMGETPTI--PE--SLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+M ++ M PE SD + L P +R T E L HPF
Sbjct: 233 KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVF---MDTNKVGHG 365
NI L + N +KL DFG + ++ PGE L GT +Y+APE+ M+ N G+G
Sbjct: 154 NILLDDDMN-IKLTDFGFSCQLD-----PGEKLRSVCGTPSYLAPEIIECSMNDNHPGYG 207
Query: 366 RAVDIWSLGCVLVEMSSG 383
+ VD+WS G ++ + +G
Sbjct: 208 KEVDMWSTGVIMYTLLAG 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEI---QLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG VY A + ++A+K + QL K+ ++ E+ I + N+++
Sbjct: 23 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR---EIEIQSHLRHPNILRM 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y R+ + L +E G L +Q E + ++L DA+ HE ++HR
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIHR 138
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ + +G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 139 DIKPENLLMGYKG-ELKIADFGWSVHAPSLRR-----RXMCGTLDYLPPEMIEGKT---H 189
Query: 188 GRAVDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
VD+W G + E G P+ + ++ + V + P LSD +
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL----KFPPFLSDGSKDLISK 245
Query: 246 CLRHDPAQRATIFELLQHPFL 266
LR+ P QR + +++HP++
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWV 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEI---QLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG VY A + ++A+K + QL K+ ++ E+ I + N+++
Sbjct: 24 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR---EIEIQSHLRHPNILRM 80
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y R+ + L +E G L +Q E + ++L DA+ HE ++HR
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIHR 139
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ + +G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 140 DIKPENLLMGYKG-ELKIADFGWSVHAPSLRR-----RXMCGTLDYLPPEMIEGKT---H 190
Query: 188 GRAVDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
VD+W G + E G P+ + ++ + V + P LSD +
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL----KFPPFLSDGSKDLISK 246
Query: 246 CLRHDPAQRATIFELLQHPFL 266
LR+ P QR + +++HP++
Sbjct: 247 LLRYHPPQRLPLKGVMEHPWV 267
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEI---QLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG VY A + ++A+K + QL K+ ++ E+ I + N+++
Sbjct: 23 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR---EIEIQSHLRHPNILRM 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y R+ + L +E G L +Q E + ++L DA+ HE ++HR
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKVIHR 138
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK N+ + +G LK+ DFG +V + GT Y+ PE+ H
Sbjct: 139 DIKPENLLMGYKG-ELKIADFGWSVHAPSLRR-----RXMCGTLDYLPPEMIEGKT---H 189
Query: 188 GRAVDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
VD+W G + E G P+ + ++ + V + P LSD +
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL----KFPPFLSDGSKDLISK 245
Query: 246 CLRHDPAQRATIFELLQHPFL 266
LR+ P QR + +++HP++
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWV 266
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ +M++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYQMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ +M++G
Sbjct: 221 WWALGVLIYQMAAG 234
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 18/272 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG + ++ ELVA+K I+ ++ D VK ++ R + N+V++ V
Sbjct: 27 GSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN-VKREIINHR---SLRHPNIVRFKEV 82
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + + ME + G L E + + E R + +QL+ +S H + HRD+
Sbjct: 83 ILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDL 140
Query: 130 KSANIFLT-AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N L + LK+ DFG S + + + VGT AY+APEV + K G
Sbjct: 141 KLENTLLDGSPAPRLKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLL--KKEYDG 194
Query: 189 RAVDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
+ D+WS G L M G P+ E N++ + IP+ +S E +
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 254
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
DPA+R +I E+ H + + + D+ N
Sbjct: 255 RIFVADPAKRISIPEIRNHEWFLKNLPADLMN 286
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LK+ DFG S + + + VGT AY+APEV + K G+ D+WS G L
Sbjct: 155 LKICDFG----YSKSSVLHSQPKSTVGTPAYIAPEVLL--KKEYDGKVADVWSCGVTLYV 208
Query: 380 MSSG 383
M G
Sbjct: 209 MLVG 212
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 13/228 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE 238
VD W+LG ++ EM++G P+ D QI K+ G+ P S +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSD 264
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 18/272 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG + + ELVA+K I+ ++ D VK ++ R + N+V++ V
Sbjct: 28 GAGNFGVARLMRDKQANELVAVKYIERGEKIDEN-VKREIINHR---SLRHPNIVRFKEV 83
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + + ME + G L E + + E R + +QL+ +S H + HRD+
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYAHAMQVAHRDL 141
Query: 130 KSANIFLT-AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N L + LK+ DFG S + + + VGT AY+APEV + K G
Sbjct: 142 KLENTLLDGSPAPRLKIADFG----YSKASVLHSQPKSAVGTPAYIAPEVLL--KKEYDG 195
Query: 189 RAVDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
+ D+WS G L M G P+ E N++ + IP+ +S E +
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
DPA+R +I E+ H + + + D+ N
Sbjct: 256 RIFVADPAKRISIPEIRNHEWFLKNLPADLMN 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LK+ DFG S + + + VGT AY+APEV + K G+ D+WS G L
Sbjct: 156 LKIADFG----YSKASVLHSQPKSAVGTPAYIAPEVLL--KKEYDGKVADVWSCGVTLYV 209
Query: 380 MSSG 383
M G
Sbjct: 210 MLVG 213
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 16/175 (9%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L E R+ + L++ I ALH+ IVHRD+K NI L + N +KL DFG + ++
Sbjct: 108 LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLD---- 162
Query: 160 VPGE-LNGFVGTQAYMAPEVF---MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDS 215
PGE L GT +Y+APE+ M+ N G+G+ VD+WS G ++ + +G P+ +
Sbjct: 163 -PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF--WHR 219
Query: 216 NYQIMFKVGMGETPTI--PE--SLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+M ++ M PE SD + L P +R T E L HPF
Sbjct: 220 KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVF---MDTNKVGHG 365
NI L + N +KL DFG + ++ PGE L GT +Y+APE+ M+ N G+G
Sbjct: 141 NILLDDDMN-IKLTDFGFSCQLD-----PGEKLREVCGTPSYLAPEIIECSMNDNHPGYG 194
Query: 366 RAVDIWSLGCVLVEMSSG 383
+ VD+WS G ++ + +G
Sbjct: 195 KEVDMWSTGVIMYTLLAG 212
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 56/299 (18%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +G V +A TG+ VA+K+I + + K L EL+IL+ N++ +
Sbjct: 64 GNGAYGVVSSARRRLTGQQVAIKKIP-NAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 71 --------EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVL--VRRYTKQLVDAISALH 120
E +VL + E L ++ S++ P L VR + QL+ + +H
Sbjct: 123 LRPTVPYGEFKSVYVVLDL---MESDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMH 176
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGE----LNGFVGTQAYMAP 176
++HRD+K +N+ L E LK+GDFG A + T P E + +V T+ Y AP
Sbjct: 177 SAQVIHRDLKPSNL-LVNENCELKIGDFGMARGL---CTSPAEHQYFMTEYVATRWYRAP 232
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKR--PWAEYDSNYQIMFKVGMGETPTIPES 234
E+ + ++ + +A+D+WS+GC+ EM + ++ P Y Q++ V +P + ++
Sbjct: 233 ELMLSLHE--YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 290
Query: 235 LSDE-------------------------GQAFAEL--CLRHDPAQRATIFELLQHPFL 266
+ E QA + L LR +P+ R + L+HPFL
Sbjct: 291 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGE----LNGFVGTQAYMAPEVFMDTNKVGHGRA 367
L E LK+GDFG A + T P E + +V T+ Y APE+ + ++ + +A
Sbjct: 190 LLVNENCELKIGDFGMARGL---CTSPAEHQYFMTEYVATRWYRAPELMLSLHE--YTQA 244
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
+D+WS+GC+ EM + + G
Sbjct: 245 IDLWSVGCIFGEMLARRQLFPG 266
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 16/175 (9%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L E R+ + L++ I ALH+ IVHRD+K NI L + N +KL DFG + ++
Sbjct: 121 LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLD---- 175
Query: 160 VPGE-LNGFVGTQAYMAPEVF---MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDS 215
PGE L GT +Y+APE+ M+ N G+G+ VD+WS G ++ + +G P+ +
Sbjct: 176 -PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF--WHR 232
Query: 216 NYQIMFKVGMGETPTI--PE--SLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+M ++ M PE SD + L P +R T E L HPF
Sbjct: 233 KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVF---MDTNKVGHG 365
NI L + N +KL DFG + ++ PGE L GT +Y+APE+ M+ N G+G
Sbjct: 154 NILLDDDMN-IKLTDFGFSCQLD-----PGEKLREVCGTPSYLAPEIIECSMNDNHPGYG 207
Query: 366 RAVDIWSLGCVLVEMSSG 383
+ VD+WS G ++ + +G
Sbjct: 208 KEVDMWSTGVIMYTLLAG 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 56/299 (18%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +G V +A TG+ VA+K+I + + K L EL+IL+ N++ +
Sbjct: 63 GNGAYGVVSSARRRLTGQQVAIKKIP-NAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 71 --------EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVL--VRRYTKQLVDAISALH 120
E +VL + E L ++ S++ P L VR + QL+ + +H
Sbjct: 122 LRPTVPYGEFKSVYVVLDL---MESDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMH 175
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGE----LNGFVGTQAYMAP 176
++HRD+K +N+ L E LK+GDFG A + T P E + +V T+ Y AP
Sbjct: 176 SAQVIHRDLKPSNL-LVNENCELKIGDFGMARGL---CTSPAEHQYFMTEYVATRWYRAP 231
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKR--PWAEYDSNYQIMFKVGMGETPTIPES 234
E+ + ++ + +A+D+WS+GC+ EM + ++ P Y Q++ V +P + ++
Sbjct: 232 ELMLSLHE--YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289
Query: 235 LSDE-------------------------GQAFAEL--CLRHDPAQRATIFELLQHPFL 266
+ E QA + L LR +P+ R + L+HPFL
Sbjct: 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGE----LNGFVGTQAYMAPEVFMDTNKVGHGRA 367
L E LK+GDFG A + T P E + +V T+ Y APE+ + ++ + +A
Sbjct: 189 LLVNENCELKIGDFGMARGL---CTSPAEHQYFMTEYVATRWYRAPELMLSLHE--YTQA 243
Query: 368 VDIWSLGCVLVEMSSGKTNLSG 389
+D+WS+GC+ EM + + G
Sbjct: 244 IDLWSVGCIFGEMLARRQLFPG 265
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 20/263 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG+V + T + A+K I + + +L E+ +L+ ++ N++K + +
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ EL T G L + +++ E R KQ+ I+ +H++ IVHRD+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 130 KSANIFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K NI L ++ +K+ DFG + +T + +GT Y+APEV T +
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----IGTAYYIAPEVLRGT----Y 199
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSN-YQIMFKVGMGETP-TIPE--SLSDEGQAFA 243
D+WS G +L + SG P+ Y N Y I+ +V G+ +P+ ++SD+ +
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPF--YGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 244 ELCLRHDPAQRATIFELLQHPFL 266
L P+ R T + L+HP++
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWI 280
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 310 NIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI L ++ +K+ DFG + +T + +GT Y+APEV T +
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----IGTAYYIAPEVLRGT----YDEK 202
Query: 368 VDIWSLGCVLVEMSSG 383
D+WS G +L + SG
Sbjct: 203 CDVWSAGVILYILLSG 218
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 14/252 (5%)
Query: 11 GQGRFGKVYTAVN---NETGELVAMKEIQLHK-QNDARFVKDMLVELRILEGINQKNLVK 66
G G +GKV+ ++TG+L AMK ++ A+ + E ++LE I Q +
Sbjct: 63 GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLV 122
Query: 67 YYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
E ++ L ++ G L + + S + E V+ Y ++V A+ LH+ I+
Sbjct: 123 TLHYAFQTETKLHLILDYINGGELFTHL-SQRERFTEHEVQIYVGEIVLALEHLHKLGII 181
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+RDIK NI L + G+ + L DFG + + A T F GT YMAP++ +
Sbjct: 182 YRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERA--YDFCGTIEYMAPDIVRGGDS- 237
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPW---AEYDSNYQIMFKVGMGETPTIPESLSDEGQAF 242
GH +AVD WSLG ++ E+ +G P+ E +S +I ++ E P P+ +S +
Sbjct: 238 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKDL 296
Query: 243 AELCLRHDPAQR 254
+ L DP +R
Sbjct: 297 IQRLLMKDPKKR 308
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L + G+ + L DFG + + A T F GT YMAP++ + GH +AVD
Sbjct: 189 NILLDSNGHVV-LTDFGLSKEFVADETERA--YDFCGTIEYMAPDIVRGGDS-GHDKAVD 244
Query: 370 IWSLGCVLVEMSSGKTNLS 388
WSLG ++ E+ +G + +
Sbjct: 245 WWSLGVLMYELLTGASPFT 263
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 4 VTFSVSPGQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
+ F G+G FG V Y + + TGE+VA+K++Q + ++D E+ IL+ +
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSL 69
Query: 60 NQKNLVKYYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
N+VKY GV R + L ME G+L +Q ++ + + + +YT Q+ +
Sbjct: 70 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 129
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFG-----SAVKISAHTTVPGELNGFVGTQA 172
L +HR++ + NI + E N +K+GDFG K PGE F
Sbjct: 130 YLGTKRYIHRNLATRNILVENE-NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF----- 183
Query: 173 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM----SSGKRPWAEY 213
+ APE ++ A D+WS G VL E+ K P AE+
Sbjct: 184 WYAPESLTESK---FSVASDVWSFGVVLYELFTYIEKSKSPPAEF 225
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 33/252 (13%)
Query: 45 FVKDMLVELRIL-EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQS---TEDGL 100
F L+E+++L E + N+++YY E + + +ELC L+ LV+S +++ L
Sbjct: 51 FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNVSDENL 109
Query: 101 PEVLVRRYT-----KQLVDAISALHENTIVHRDIKSANIFLT------------AEGNSL 143
L + Y +Q+ ++ LH I+HRD+K NI ++ AE +
Sbjct: 110 K--LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
Query: 144 KLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTN----KVGHGRAVDIWSLGC 198
+ DFG K+ S ++ LN GT + APE+ ++N K R++DI+S+GC
Sbjct: 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC 227
Query: 199 VLVE-MSSGKRPWAE-YDSNYQIMFKV-GMGETPTIPE-SLSDEGQAFAELCLRHDPAQR 254
V +S GK P+ + Y I+ + + E + + SL E + HDP +R
Sbjct: 228 VFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR 287
Query: 255 ATIFELLQHPFL 266
T ++L+HP
Sbjct: 288 PTAMKVLRHPLF 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 315 AEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTN----KVGHGRAVD 369
AE + + DFG K+ S ++ LN GT + APE+ ++N K R++D
Sbjct: 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSID 221
Query: 370 IWSLGCVLVE-MSSGK 384
I+S+GCV +S GK
Sbjct: 222 IFSMGCVFYYILSKGK 237
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 18/272 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG + ++ ELVA+K I+ ++ A VK ++ R L N+V++ V
Sbjct: 28 GSGNFGVARLMRDKQSNELVAVKYIERGEKIAAN-VKREIINHRSLR---HPNIVRFKEV 83
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + + ME + G L E + + E R + +QL+ +S H + HRD+
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 130 KSANIFLT-AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N L + LK+ DFG + H+ + VGT AY+APEV + K G
Sbjct: 142 KLENTLLDGSPAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLL--KKEYDG 195
Query: 189 RAVDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
+ D+WS G L M G P+ E N++ + IP+ +S E +
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
DPA+R +I E+ H + + + D+ N
Sbjct: 256 RIFVADPAKRISIPEIRNHEWFLKNLPADLMN 287
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LK+ DFG + H+ + VGT AY+APEV + K G+ D+WS G L
Sbjct: 156 LKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLL--KKEYDGKVADVWSCGVTLYV 209
Query: 380 MSSG 383
M G
Sbjct: 210 MLVG 213
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 22/288 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G F +V A + T +LVA+K I K+ M E+ +L I N+V +
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIA--KKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGL-PEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ L M+L + G L + E G E R Q++DA+ LH+ IVHRD+
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 130 KSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVG 186
K N+ + E + + + DFG + PG L+ GT Y+APEV +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFG-----LSKMEDPGSVLSTACGTPGYVAPEVLA---QKP 194
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSN----YQIMFKVGMGETPTIPESLSDEGQAF 242
+ +AVD WS+G + + G P+ YD N ++ + K + +SD + F
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPF--YDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 243 AELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLK 290
+ DP +R T + LQHP++ D +SV + +++ K
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAK 300
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 291 LGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQA 349
LGIV + +++ Y+ E + + + DFG + PG L+ GT
Sbjct: 135 LGIVHRDLKPENLLYYS------LDEDSKIMISDFGLS-----KMEDPGSVLSTACGTPG 183
Query: 350 YMAPEVFMDTNKVGHGRAVDIWSLGCV 376
Y+APEV + + +AVD WS+G +
Sbjct: 184 YVAPEVLA---QKPYSKAVDCWSIGVI 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT Y+AP + + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPAIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT Y+AP + + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEYLAPAIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 22/288 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G F +V A + T +LVA+K I K+ M E+ +L I N+V +
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIA--KEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGL-PEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ L M+L + G L + E G E R Q++DA+ LH+ IVHRD+
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 130 KSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVG 186
K N+ + E + + + DFG + PG L+ GT Y+APEV +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFG-----LSKMEDPGSVLSTACGTPGYVAPEVLA---QKP 194
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSN----YQIMFKVGMGETPTIPESLSDEGQAF 242
+ +AVD WS+G + + G P+ YD N ++ + K + +SD + F
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPF--YDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 243 AELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLK 290
+ DP +R T + LQHP++ D +SV + +++ K
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAK 300
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 291 LGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQA 349
LGIV + +++ Y+ E + + + DFG + PG L+ GT
Sbjct: 135 LGIVHRDLKPENLLYYS------LDEDSKIMISDFGLS-----KMEDPGSVLSTACGTPG 183
Query: 350 YMAPEVFMDTNKVGHGRAVDIWSLGCV 376
Y+APEV + + +AVD WS+G +
Sbjct: 184 YVAPEVLA---QKPYSKAVDCWSIGVI 207
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 123/267 (46%), Gaps = 23/267 (8%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKD-----MLVELRILEGIN 60
++SP G G FG V+TAV+ E + V +K I+ K + +++D + +E+ IL +
Sbjct: 28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE 87
Query: 61 QKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
N++K + ++ L ME G L E L +QLV A+ L
Sbjct: 88 HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR 147
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL-NGFVGTQAYMAPEVF 179
I+HRDIK NI + AE ++KL DFGSA + G+L F GT Y APEV
Sbjct: 148 LKDIIHRDIKDENIVI-AEDFTIKLIDFGSAAYLER-----GKLFYTFCGTIEYCAPEVL 201
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
M G +++WSLG L + + P+ E + + P +S E
Sbjct: 202 MGNPY--RGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHP--------PYLVSKEL 251
Query: 240 QAFAELCLRHDPAQRATIFELLQHPFL 266
+ L+ P +R T+ +L+ P++
Sbjct: 252 MSLVSGLLQPVPERRTTLEKLVTDPWV 278
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 313 LTAEGNSLKLGDFGSAVKISAHTTVPGEL-NGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
+ AE ++KL DFGSA + G+L F GT Y APEV M G +++W
Sbjct: 162 VIAEDFTIKLIDFGSAAYLER-----GKLFYTFCGTIEYCAPEVLMGNPY--RGPELEMW 214
Query: 372 SLGCVL 377
SLG L
Sbjct: 215 SLGVTL 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 124/279 (44%), Gaps = 24/279 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLV-ELRILEGINQKNLVKYYG 69
G+G+FG VY A ++ +VA+K + Q + V+ L E+ I ++ N+++ Y
Sbjct: 32 GKGKFGNVYLAREKKSHFIVALK-VLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
R + L +E G L +Q + E ++L DA+ H ++HRDI
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKS-CTFDEQRTATIMEELADALMYCHGKKVIHRDI 149
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
K N+ L LK+ DFG +V + GT Y+ PE+ H
Sbjct: 150 KPENL-LLGLKGELKIADFGWSVHAPSLRR-----KTMCGTLDYLPPEMIEGR---MHNE 200
Query: 190 AVDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
VD+W +G + E+ G P+ A ++ Y+ + KV + P S+ Q L
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDL----KFPASVPTGAQDLISKLL 256
Query: 248 RHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQ 286
RH+P++R + ++ HP++ + R +P S LQ
Sbjct: 257 RHNPSERLPLAQVSAHPWVRANSR------RVLPPSALQ 289
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 104
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 105 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 161
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 162 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 214
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 215 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 263
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 264 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 179 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 229
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 230 AAVWSLGILLYDMVCG 245
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 22/288 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G F +V A + T +LVA+K I K+ M E+ +L I N+V +
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIA--KEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGL-PEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ L M+L + G L + E G E R Q++DA+ LH+ IVHRD+
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 130 KSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVG 186
K N+ + E + + + DFG + PG L+ GT Y+APEV +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFG-----LSKMEDPGSVLSTACGTPGYVAPEVLA---QKP 194
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSN----YQIMFKVGMGETPTIPESLSDEGQAF 242
+ +AVD WS+G + + G P+ YD N ++ + K + +SD + F
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPF--YDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 243 AELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLK 290
+ DP +R T + LQHP++ D +SV + +++ K
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAK 300
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 291 LGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQA 349
LGIV + +++ Y+ E + + + DFG + PG L+ GT
Sbjct: 135 LGIVHRDLKPENLLYYS------LDEDSKIMISDFGLS-----KMEDPGSVLSTACGTPG 183
Query: 350 YMAPEVFMDTNKVGHGRAVDIWSLGCV 376
Y+APEV + + +AVD WS+G +
Sbjct: 184 YVAPEVLA---QKPYSKAVDCWSIGVI 207
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 97
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 157 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANSFVGTAQYVSPELLTEKSA--- 211
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 212 SKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 269
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 270 VLDATKRLGCEEMEGYGPLKAHPFF 294
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 162 NILLN-EDMHIQITDFGTA-KVLSPESKQARANSFVGTAQYVSPELLTEKSA---SKSSD 216
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 117/265 (44%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT A++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPAFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT A++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPAFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G F +V A + T +LVA+K I K+ M E+ +L I N+V +
Sbjct: 27 GTGAFSEVILAEDKRTQKLVAIKCIA--KEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGL-PEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ L M+L + G L + E G E R Q++DA+ LH+ IVHRD+
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 130 KSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQAYMAPEVFMDTNKVG 186
K N+ + E + + + DFG + PG L+ GT Y+APEV +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFG-----LSKMEDPGSVLSTACGTPGYVAPEVLA---QKP 194
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSN----YQIMFKVGMGETPTIPESLSDEGQAF 242
+ +AVD WS+G + + G P+ YD N ++ + K + +SD + F
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPF--YDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ DP +R T + LQHP++
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWI 276
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 291 LGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGE-LNGFVGTQA 349
LGIV + +++ Y+ E + + + DFG + PG L+ GT
Sbjct: 135 LGIVHRDLKPENLLYYS------LDEDSKIMISDFGLS-----KMEDPGSVLSTACGTPG 183
Query: 350 YMAPEVFMDTNKVGHGRAVDIWSLGCV 376
Y+APEV + + +AVD WS+G +
Sbjct: 184 YVAPEVLA---QKPYSKAVDCWSIGVI 207
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 86 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 142
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 195
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 196 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 244
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 245 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 160 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 210
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 211 AAVWSLGILLYDMVCG 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 123/270 (45%), Gaps = 29/270 (10%)
Query: 11 GQGRFGKVY---TAVNNETGELVAMKEIQLHKQNDARFVKDML---VELRILEGINQKNL 64
G+G +GKV+ TG++ AMK L K R KD E ILE + +
Sbjct: 26 GKGGYGKVFQVRKVTGANTGKIFAMK--VLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-PEVLVRRYTKQLVDAISALHENT 123
V ++ L +E + G L +Q +G+ E Y ++ A+ LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I++RD+K NI L +G+ +KL DFG + TV + F GT YMAPE+ M
Sbjct: 142 IIYRDLKPENIMLNHQGH-VKLTDFGLCKESIHDGTV---THXFCGTIEYMAPEILM--- 194
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQI--MFKVGMGETPTIPESLSDEGQA 241
+ GH RAVD WSLG ++ +M +G P+ + I + K + +P L+ E +
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL----NLPPYLTQEARD 250
Query: 242 FAELCLRHDPAQR-----ATIFELLQHPFL 266
+ L+ + A R E+ HPF
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L +G+ +KL DFG + TV + F GT YMAPE+ M + GH RAVD
Sbjct: 151 NIMLNHQGH-VKLTDFGLCKESIHDGTV---THXFCGTIEYMAPEILM---RSGHNRAVD 203
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
WSLG ++ +M +G +G
Sbjct: 204 WWSLGALMYDMLTGAPPFTG 223
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 99 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 155
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 208
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 209 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR-------- 257
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 258 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 173 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 223
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 224 AAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 98 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 154
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 207
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 208 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR-------- 256
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 257 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 172 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 222
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 223 AAVWSLGILLYDMVCG 238
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 95
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 155 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANAFVGTAQYVSPELLTEKSAC-- 210
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 211 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 267
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 268 VLDATKRLGCEEMEGYGPLKAHPFF 292
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 160 NILLN-EDMHIQITDFGTA-KVLSPESKQARANAFVGTAQYVSPELLTEKSAC---KSSD 214
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 215 LWALGCIIYQLVAG 228
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 123/270 (45%), Gaps = 29/270 (10%)
Query: 11 GQGRFGKVY---TAVNNETGELVAMKEIQLHKQNDARFVKDML---VELRILEGINQKNL 64
G+G +GKV+ TG++ AMK L K R KD E ILE + +
Sbjct: 26 GKGGYGKVFQVRKVTGANTGKIFAMK--VLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-PEVLVRRYTKQLVDAISALHENT 123
V ++ L +E + G L +Q +G+ E Y ++ A+ LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I++RD+K NI L +G+ +KL DFG + TV + F GT YMAPE+ M
Sbjct: 142 IIYRDLKPENIMLNHQGH-VKLTDFGLCKESIHDGTV---THTFCGTIEYMAPEILM--- 194
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQI--MFKVGMGETPTIPESLSDEGQA 241
+ GH RAVD WSLG ++ +M +G P+ + I + K + +P L+ E +
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL----NLPPYLTQEARD 250
Query: 242 FAELCLRHDPAQR-----ATIFELLQHPFL 266
+ L+ + A R E+ HPF
Sbjct: 251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L +G+ +KL DFG + TV + F GT YMAPE+ M + GH RAVD
Sbjct: 151 NIMLNHQGH-VKLTDFGLCKESIHDGTV---THTFCGTIEYMAPEILM---RSGHNRAVD 203
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
WSLG ++ +M +G +G
Sbjct: 204 WWSLGALMYDMLTGAPPFTG 223
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 42 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 98
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 158 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANSFVGTAQYVSPELLTEKSAC-- 213
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 214 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 270
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 271 VLDATKRLGCEEMEGYGPLKAHPFF 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 163 NILLN-EDMHIQITDFGTA-KVLSPESKQARANSFVGTAQYVSPELLTEKSAC---KSSD 217
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 218 LWALGCIIYQLVAG 231
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 113 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 169
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 222
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 223 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 271
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 272 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 187 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 237
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 238 AAVWSLGILLYDMVCG 253
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 98 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 154
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 207
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 208 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR-------- 256
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 257 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 172 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 222
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 223 AAVWSLGILLYDMVCG 238
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 17/272 (6%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
S V S G G FG VY G+ VA+K +++ +F + E+ +L
Sbjct: 36 SEVMLSTRIGSGSFGTVYKG--KWHGD-VAVKILKVVDPTPEQF-QAFRNEVAVLRKTRH 91
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE 121
N++ + G + ++ + + + C +L + E + +Q + LH
Sbjct: 92 VNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150
Query: 122 NTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMD 181
I+HRD+KS NIFL EG ++K+GDFG A + + + ++ G+ +MAPEV
Sbjct: 151 KNIIHRDMKSNNIFL-HEGLTVKIGDFGLAT-VKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 182 TNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMG-ETPTIPESLSDEGQ 240
+ D++S G VL E+ +G+ P++ ++ QI+F VG G +P + + + +
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK 268
Query: 241 AFAEL---CLRHDPAQRATI------FELLQH 263
A L C++ +R ELLQH
Sbjct: 269 AMKRLVADCVKKVKEERPLFPQILSSIELLQH 300
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL EG ++K+GDFG A + + + ++ G+ +MAPEV + D
Sbjct: 162 NIFL-HEGLTVKIGDFGLAT-VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSD 219
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
++S G VL E+ +G+ S +
Sbjct: 220 VYSYGIVLYELMTGELPYSHI 240
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 99 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 155
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 208
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 209 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR-------- 257
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 258 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 173 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 223
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 224 AAVWSLGILLYDMVCG 239
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 85 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 141
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 194
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 195 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 243
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 244 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 159 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 209
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 210 AAVWSLGILLYDMVCG 225
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 66 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 122
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 175
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 176 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR-------- 224
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 225 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 140 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 190
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 191 AAVWSLGILLYDMVCG 206
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 71 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 127
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 180
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 181 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 229
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 230 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 145 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 195
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 196 AAVWSLGILLYDMVCG 211
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 71 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 127
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 180
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 181 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 229
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 230 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 145 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 195
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 196 AAVWSLGILLYDMVCG 211
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 70 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 126
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 179
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 180 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 228
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 229 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 262
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 144 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 194
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 195 AAVWSLGILLYDMVCG 210
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 66 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 122
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 175
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 176 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 224
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 225 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 140 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 190
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 191 AAVWSLGILLYDMVCG 206
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 71 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 127
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 180
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 181 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 229
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 230 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 145 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 195
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 196 AAVWSLGILLYDMVCG 211
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 98 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 154
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 207
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 208 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 256
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 257 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 172 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 222
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 223 AAVWSLGILLYDMVCG 238
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 86 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 142
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 195
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 196 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 244
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 245 --QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 160 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 210
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 211 AAVWSLGILLYDMVCG 226
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 99 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 155
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 208
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 209 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR-------- 257
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 258 --QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 173 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 223
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 224 AAVWSLGILLYDMVCG 239
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 70 SGFS--GVIRLLDWFERPDSFVLILER-MEPVQDLFDFITERGALQEELARSFFWQVLEA 126
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 179
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 180 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 228
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 229 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 262
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 144 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 194
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 195 AAVWSLGILLYDMVCG 210
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 99 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 155
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 208
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 209 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR-------- 257
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 258 --QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 173 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 223
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 224 AAVWSLGILLYDMVCG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 98 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 154
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 207
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 208 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR-------- 256
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 257 --QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 172 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 222
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 223 AAVWSLGILLYDMVCG 238
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 46 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 102
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 162 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 217
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 218 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 274
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 275 VLDATKRLGCEEMEGYGPLKAHPFF 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 167 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 221
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 222 LWALGCIIYQLVAG 235
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 85 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 141
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 194
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 195 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 243
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 244 --QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 159 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 209
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 210 AAVWSLGILLYDMVCG 225
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 58 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 117
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 118 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 174
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 175 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 227
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 228 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 276
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 277 --QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 310
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 192 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 242
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 243 AAVWSLGILLYDMVCG 258
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 66 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 122
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 175
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 176 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 224
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 225 --QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 140 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 190
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 191 AAVWSLGILLYDMVCG 206
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +G V +AV+ TG VA+K++ Q++ F K ELR+L+ + +N++ V
Sbjct: 34 GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-FAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 71 EIHREEMVLFME----LCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
E + F + + GT L L++ + G E ++ Q++ + +H I+
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG--EDRIQFLVYQMLKGLRYIHAAGII 150
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
HRD+K N+ + E LK+ DFG A + + E+ G V T+ Y APEV + N +
Sbjct: 151 HRDLKPGNLAVN-EDCELKILDFGLARQADS------EMXGXVVTRWYRAPEVIL--NWM 201
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWA---EYDSNYQIMFKVGMGETPTIPESLSDEGQAF 242
+ + VDIWS+GC++ EM +GK + D +IM G + SDE + +
Sbjct: 202 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 261
Query: 243 A--------------------------ELCLRHDPAQRATIFELLQHPFL 266
E L D QR T E L HP+
Sbjct: 262 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG A + + E+ G V T+ Y APEV + N + + + VDIWS+GC
Sbjct: 163 EDCELKILDFGLARQADS------EMXGXVVTRWYRAPEVIL--NWMRYTQTVDIWSVGC 214
Query: 376 VLVEMSSGKTNLSG 389
++ EM +GKT G
Sbjct: 215 IMAEMITGKTLFKG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 95
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 155 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 210
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 211 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 267
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 268 VLDATKRLGCEEMEGYGPLKAHPFF 292
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 160 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 214
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 215 LWALGCIIYQLVAG 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 23/255 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V+ ++ + A+K I K+ +A K+ + L++ EG N+VK + V
Sbjct: 20 GEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKE-ITALKLCEG--HPNIVKLHEV 74
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ L MEL G L ++ + E ++LV A+S +H+ +VHRD+K
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKH-FSETEASYIMRKLVSAVSHMHDVGVVHRDLK 133
Query: 131 SANIFLTAEGNSL--KLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
N+ T E ++L K+ DFG A ++ P + F T Y APE+ N+ G+
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFA-RLKPPDNQPLKTPCF--TLHYAAPELL---NQNGYD 187
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYD------SNYQIMFKVGMGETPTIPES---LSDEG 239
+ D+WSLG +L M SG+ P+ +D S +IM K+ G+ E+ +S E
Sbjct: 188 ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEA 247
Query: 240 QAFAELCLRHDPAQR 254
+ + L DP +R
Sbjct: 248 KDLIQGLLTVDPNKR 262
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 310 NIFLTAEGNSL--KLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
N+ T E ++L K+ DFG A ++ P + F T Y APE+ N+ G+ +
Sbjct: 136 NLLFTDENDNLEIKIIDFGFA-RLKPPDNQPLKTPCF--TLHYAAPELL---NQNGYDES 189
Query: 368 VDIWSLGCVLVEMSSGK 384
D+WSLG +L M SG+
Sbjct: 190 CDLWSLGVILYTMLSGQ 206
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 33/252 (13%)
Query: 45 FVKDMLVELRIL-EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQS---TEDGL 100
F L+E+++L E + N+++YY E + + +ELC L+ LV+S +++ L
Sbjct: 51 FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLN-LQDLVESKNVSDENL 109
Query: 101 PEVLVRRYT-----KQLVDAISALHENTIVHRDIKSANIFLT------------AEGNSL 143
L + Y +Q+ ++ LH I+HRD+K NI ++ AE +
Sbjct: 110 K--LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
Query: 144 KLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTN----KVGHGRAVDIWSLGC 198
+ DFG K+ S LN GT + APE+ ++N K R++DI+S+GC
Sbjct: 168 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC 227
Query: 199 VLVE-MSSGKRPWAE-YDSNYQIMFKV-GMGETPTIPE-SLSDEGQAFAELCLRHDPAQR 254
V +S GK P+ + Y I+ + + E + + SL E + HDP +R
Sbjct: 228 VFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR 287
Query: 255 ATIFELLQHPFL 266
T ++L+HP
Sbjct: 288 PTAMKVLRHPLF 299
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 315 AEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTN----KVGHGRAVD 369
AE + + DFG K+ S LN GT + APE+ ++N K R++D
Sbjct: 162 AENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSID 221
Query: 370 IWSLGCVLVE-MSSGK 384
I+S+GCV +S GK
Sbjct: 222 IFSMGCVFYYILSKGK 237
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 93 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 149
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 150 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 202
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 203 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 251
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 252 --QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 285
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 167 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 217
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 218 AAVWSLGILLYDMVCG 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 97
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 157 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 212
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 213 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 269
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 270 VLDATKRLGCEEMEGYGPLKAHPFF 294
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 162 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 216
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 38 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 94
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 154 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANSFVGTAQYVSPELLTEKSAC-- 209
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 210 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 266
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 267 VLDATKRLGCEEMEGYGPLKAHPFF 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 159 NILLN-EDMHIQITDFGTA-KVLSPESKQARANSFVGTAQYVSPELLTEKSAC---KSSD 213
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 214 LWALGCIIYQLVAG 227
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 113 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 169
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 222
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 223 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 271
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 272 --QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 187 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 237
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 238 AAVWSLGILLYDMVCG 253
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 97
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 157 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 212
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 213 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 269
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 270 VLDATKRLGCEEMEGYGPLKAHPFF 294
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 162 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 216
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 97
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 157 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 212
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 213 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 269
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 270 VLDATKRLGCEEMEGYGPLKAHPFF 294
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 162 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 216
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 39 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 95
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 155 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 210
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 211 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 267
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 268 VLDATKRLGCEEMEGYGPLKAHPFF 292
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 160 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 214
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 215 LWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 42 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 98
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 158 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 213
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 214 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 270
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 271 VLDATKRLGCEEMEGYGPLKAHPFF 295
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 163 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 217
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 218 LWALGCIIYQLVAG 231
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 69 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 125
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 178
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 179 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 227
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P+ R T E+ HP++
Sbjct: 228 --QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 261
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 143 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 193
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 194 AAVWSLGILLYDMVCG 209
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKE-IQLHKQNDARFVKDMLVELRILEGINQKNLVKYYG 69
G+G FG+ + ETGE++ MKE I+ ++ F+K E++++ + N++K+ G
Sbjct: 19 GKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK----EVKVMRCLEHPNVLKFIG 74
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
V + + E GTL +++S + P + K + ++ LH I+HRD+
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDL 134
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGF-----------VGTQAYMAPEV 178
S N L E ++ + DFG A + T P L VG +MAPE+
Sbjct: 135 NSHNC-LVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEM 203
N + VD++S G VL E+
Sbjct: 194 I---NGRSYDEKVDVFSFGIVLCEI 215
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V + E+G AMK + K + ++ L E RIL+ +N LVK
Sbjct: 50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ME G + S ++ E R Y Q+V LH +++RD+K
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + +G +++ DFG A ++ T GT +APE+ + G+ +A
Sbjct: 169 PENLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEALAPEIILSK---GYNKA 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHD 250
VD W+LG ++ EM++G P+ D QI K+ G+ P S + + L+ D
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFA-DQPIQIYEKIVSGKV-RFPSHFSSDLKDLLRNLLQVD 276
Query: 251 PAQR 254
+R
Sbjct: 277 LTKR 280
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + +G +++ DFG A ++ T GT +APE+ + G+ +AVD
Sbjct: 171 NLLIDQQG-YIQVTDFGFAKRVKGRTWX------LCGTPEALAPEIILSK---GYNKAVD 220
Query: 370 IWSLGCVLVEMSSG 383
W+LG ++ EM++G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
Query: 6 FSVSP--GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-------ARFVKDMLVELRIL 56
+ V P G G FG VY+ + VA+K ++ + +D R ++++ ++
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 57 EGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDA 115
G + +++ + VL +E E + TE G L E L R + Q+++A
Sbjct: 86 SGFS--GVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEA 142
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAY 173
+ H ++HRDIK NI + LKL DFGS +K + +T F GT+ Y
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVY 195
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY---QIMFKVGMGETPT 230
PE ++ ++ HGR+ +WSLG +L +M G P+ E+D Q+ F+
Sbjct: 196 SPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR-------- 244
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ +S E Q CL P R T E+ HP++
Sbjct: 245 --QRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWM 278
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 160 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 210
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 211 AAVWSLGILLYDMVCG 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 23 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 138
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 139 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 194
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 195 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 251
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 252 VLDATKRLGCEEMEGYGPLKAHPFF 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 144 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 198
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 199 LWALGCIIYQLVAG 212
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 38 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 94
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 154 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 209
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 210 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 266
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 267 VLDATKRLGCEEMEGYGPLKAHPFF 291
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 159 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 213
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 214 LWALGCIIYQLVAG 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 19 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 75
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 134
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 135 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 190
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 191 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 247
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 248 VLDATKRLGCEEMEGYGPLKAHPFF 272
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 140 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 194
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 195 LWALGCIIYQLVAG 208
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 34 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ--TYCQRTLREIKILLAFRHENIIGINDI 91
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 149
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 150 RDLKPSNLLLNTTSD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 206
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 207 YTKSIDIWSVGCILAEMLSNR 227
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 155 SNLLLNTTSD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 211
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 212 DIWSVGCILAEMLSNRPIFPG 232
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 16 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 72
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 131
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 132 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 187
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 188 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 244
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 245 VLDATKRLGCEEMEGYGPLKAHPFF 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 137 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 191
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 192 LWALGCIIYQLVAG 205
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 18 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 74
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 133
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 134 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 189
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 190 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 246
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 247 VLDATKRLGCEEMEGYGPLKAHPFF 271
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 139 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 193
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 194 LWALGCIIYQLVAG 207
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 80
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 138
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ GFV T+ Y APE+ +
Sbjct: 139 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMAGFVATRWYRAPEIML 191
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 192 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ GFV T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 156 EDCELKILDFG----LARHTD--DEMAGFVATRWYRAPEIML--NWMHYNQTVDIWSVGC 207
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 208 IMAELLTGRTLFPG 221
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 17 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 73
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 132
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 133 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 188
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 189 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 245
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 246 VLDATKRLGCEEMEGYGPLKAHPFF 270
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 138 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 192
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 193 LWALGCIIYQLVAG 206
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 18/272 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG + ++ ELVA+K I+ ++ D VK ++ R + N+V++ V
Sbjct: 28 GSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN-VKREIINHR---SLRHPNIVRFKEV 83
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + + ME + G L E + + E R + +QL+ +S H + HRD+
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 130 KSANIFLT-AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N L + LK+ FG + H+ + VGT AY+APEV + K G
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHS----QPKSTVGTPAYIAPEVLL--KKEYDG 195
Query: 189 RAVDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
+ D+WS G L M G P+ E N++ + IP+ +S E +
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
DPA+R +I E+ H + + + D+ N
Sbjct: 256 RIFVADPAKRISIPEIRNHEWFLKNLPADLMN 287
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LK+ FG + H+ + VGT AY+APEV + K G+ D+WS G L
Sbjct: 156 LKICAFGYSKSSVLHS----QPKSTVGTPAYIAPEVLL--KKEYDGKVADVWSCGVTLYV 209
Query: 380 MSSG 383
M G
Sbjct: 210 MLVG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFL---TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 119/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+S + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E + LK+ DFG + HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDSELKILDFG----LCRHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E + LK+ DFG + HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDSELKILDFG----LCRHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 12 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 67
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G + ++ + + C +L + E + + +Q + LH +
Sbjct: 68 ILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 126
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E ++K+GDFG A + + + + G+ +MAPEV +
Sbjct: 127 IIHRDLKSNNIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
K + D+++ G VL E+ +G+ P++ ++ QI+F VG G +P + + S+ +A
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 244
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R ++L
Sbjct: 245 KRLMAECLKKKRDERPLFPQIL 266
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E ++K+GDFG A + + + + G+ +MAPEV +K + D
Sbjct: 136 NIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 194 VYAFGIVLYELMTGQLPYSNI 214
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ GFV T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMAGFVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ GFV T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMAGFVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 15 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 70
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G + ++ + + C +L + E + + +Q + LH +
Sbjct: 71 ILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E ++K+GDFG A + + + + G+ +MAPEV +
Sbjct: 130 IIHRDLKSNNIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
K + D+++ G VL E+ +G+ P++ ++ QI+F VG G +P + + S+ +A
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R ++L
Sbjct: 248 KRLMAECLKKKRDERPLFPQIL 269
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E ++K+GDFG A + + + + G+ +MAPEV +K + D
Sbjct: 139 NIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 197 VYAFGIVLYELMTGQLPYSNI 217
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 80
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK--LTDDHVQFLIYQILRGLKYIH 138
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 139 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 191
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 192 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 156 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 207
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 208 IMAELLTGRTLFPG 221
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 10 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 65
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G + ++ + + C +L + E + + +Q + LH +
Sbjct: 66 ILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E ++K+GDFG A + + + + G+ +MAPEV +
Sbjct: 125 IIHRDLKSNNIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
K + D+++ G VL E+ +G+ P++ ++ QI+F VG G +P + + S+ +A
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R ++L
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL 264
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E ++K+GDFG A + + + + G+ +MAPEV +K + D
Sbjct: 134 NIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 192 VYAFGIVLYELMTGQLPYSNI 212
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 34 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ--TYCQRTLREIKILLAFRHENIIGINDI 91
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 149
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 150 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 206
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 207 YTKSIDIWSVGCILAEMLSNR 227
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 155 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 211
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 212 DIWSVGCILAEMLSNRPIFPG 232
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ GFV T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMAGFVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ GFV T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMAGFVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 97
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 157 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 212
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F + PE + + E L
Sbjct: 213 -KSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLL 269
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 270 VLDATKRLGCEEMEGYGPLKAHPFF 294
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 162 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 216
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 15 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 70
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G + ++ + + C +L + E + + +Q + LH +
Sbjct: 71 ILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E ++K+GDFG A + + + + G+ +MAPEV +
Sbjct: 130 IIHRDLKSNNIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
K + D+++ G VL E+ +G+ P++ ++ QI+F VG G +P + + S+ +A
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 247
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R ++L
Sbjct: 248 KRLMAECLKKKRDERPLFPQIL 269
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E ++K+GDFG A + + + + G+ +MAPEV +K + D
Sbjct: 139 NIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 197 VYAFGIVLYELMTGQLPYSNI 217
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 18/272 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG + ++ ELVA+K I+ ++ D VK ++ R + N+V++ V
Sbjct: 28 GSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN-VKREIINHR---SLRHPNIVRFKEV 83
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ + + ME + G L E + + E R + +QL+ +S H + HRD+
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 130 KSANIFLT-AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
K N L + LK+ FG + H+ + VGT AY+APEV + K G
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHS----QPKDTVGTPAYIAPEVLL--KKEYDG 195
Query: 189 RAVDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETPTIPE--SLSDEGQAFAE 244
+ D+WS G L M G P+ E N++ + IP+ +S E +
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLIS 255
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
DPA+R +I E+ H + + + D+ N
Sbjct: 256 RIFVADPAKRISIPEIRNHEWFLKNLPADLMN 287
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LK+ FG + H+ + VGT AY+APEV + K G+ D+WS G L
Sbjct: 156 LKICAFGYSKSSVLHS----QPKDTVGTPAYIAPEVLL--KKEYDGKVADVWSCGVTLYV 209
Query: 380 MSSG 383
M G
Sbjct: 210 MLVG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 19 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 78
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 79 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 128 DIKSANIFL---TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 190
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 249
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 250 FIRRLLVKDPKKRMTIQDSLQHPWI 274
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 156 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 208
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 209 LLSGASPFLG 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFL---TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 19 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 78
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 79 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 128 DIKSANIFL---TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 190
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 249
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 250 FIRRLLVKDPKKRMTIQDSLQHPWI 274
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 156 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 208
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 209 LLSGASPFLG 218
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FG V Y + + TG LVA+K++Q H D + +D E++IL+ ++ +VK
Sbjct: 16 GKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQ--RDFQREIQILKALHSDFIVK 72
Query: 67 YYGVEIH--REEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y GV R E+ L ME G L +Q L + Y+ Q+ + L
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 132
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSA--VKISAHTTV---PGELNGFVGTQAYMAPEVF 179
VHRD+ + NI + +E + +K+ DFG A + + V PG+ F + APE
Sbjct: 133 VHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQSPIF-----WYAPESL 186
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEM 203
D R D+WS G VL E+
Sbjct: 187 SDNI---FSRQSDVWSFGVVLYEL 207
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 80
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 138
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 139 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 191
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 192 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 156 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 207
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 208 IMAELLTGRTLFPG 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 97
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 157 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAX-- 212
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F + PE + + E L
Sbjct: 213 -KSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLL 269
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 270 VLDATKRLGCEEMEGYGPLKAHPFF 294
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 162 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAX---KSSD 216
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 217 LWALGCIIYQLVAG 230
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKD----MLVELRILEGINQKNLVK 66
G+G FGKV+ A +T + A+K ++ D + D +VE R+L + +
Sbjct: 26 GKGSFGKVFLAEFKKTNQFFAIKALK----KDVVLMDDDVECTMVEKRVLSLAWEHPFLT 81
Query: 67 YYGVEIHREEMVLF-MELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
+ +E + F ME G L +QS Y +++ + LH IV
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIV 140
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+RD+K NI L +G+ +K+ DFG + + N F GT Y+APE+ + K
Sbjct: 141 YRDLKLDNILLDKDGH-IKIADFGMC---KENMLGDAKTNXFCGTPDYIAPEILL-GQKY 195
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
H +VD WS G +L EM G+ P+ D + +F + P P L E +
Sbjct: 196 NH--SVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMDNPFYPRWLEKEAKDLLVK 251
Query: 246 CLRHDPAQRATIF-ELLQHP-FLIVSCEE 272
+P +R + ++ QHP F ++ EE
Sbjct: 252 LFVREPEKRLGVRGDIRQHPLFREINWEE 280
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L +G+ +K+ DFG + + N F GT Y+APE+ + K H +VD
Sbjct: 148 NILLDKDGH-IKIADFGMC---KENMLGDAKTNXFCGTPDYIAPEILL-GQKYNH--SVD 200
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
WS G +L EM G++ G
Sbjct: 201 WWSFGVLLYEMLIGQSPFHG 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 116/269 (43%), Gaps = 39/269 (14%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +G+V+ + E G L A+K + R KD R L + V +
Sbjct: 66 GHGSYGEVFKVRSKEDGRLYAVKR----SMSPFRGPKD---RARKLAEVGSHEKVGQHPC 118
Query: 71 EIHREE-------MVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
+ E+ + L ELC +L+ ++ LPE V Y + + A++ LH
Sbjct: 119 CVRLEQAWEEGGILYLQTELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG 177
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
+VH D+K ANIFL G KLGDFG V++ T GE+ G YMAPE+ +
Sbjct: 178 LVHLDVKPANIFLGPRGRC-KLGDFGLLVELG--TAGAGEVQ--EGDPRYMAPELLQGS- 231
Query: 184 KVGHGRAVDIWSLGCVLVEMSS------GKRPWAEYDSNYQIMFKVGMGETPTIPESLSD 237
+G A D++SLG ++E++ G W + Y P LS
Sbjct: 232 ---YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL---------PPEFTAGLSS 279
Query: 238 EGQAFAELCLRHDPAQRATIFELLQHPFL 266
E ++ + L DP RAT LL P L
Sbjct: 280 ELRSVLVMMLEPDPKLRATAEALLALPVL 308
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 38 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 93
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G + ++ + + C +L + E + + +Q + LH +
Sbjct: 94 ILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E ++K+GDFG A + + + + G+ +MAPEV +
Sbjct: 153 IIHRDLKSNNIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
K + D+++ G VL E+ +G+ P++ ++ QI+F VG G +P + + S+ +A
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R ++L
Sbjct: 271 KRLMAECLKKKRDERPLFPQIL 292
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E ++K+GDFG A + + + + G+ +MAPEV +K + D
Sbjct: 162 NIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 220 VYAFGIVLYELMTGQLPYSNI 240
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 45 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 103
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 161
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 162 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 214
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 215 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 179 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 230
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 231 IMAELLTGRTLFPG 244
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 39 GEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 95
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 155 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 210
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + PE + + E L
Sbjct: 211 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 267
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 268 VLDATKRLGCEEMEGYGPLKAHPFF 292
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 160 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 214
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 215 LWALGCIIYQLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---LHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F V A T A+K ++ + K+N +V E ++ ++ VK
Sbjct: 44 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRLDHPFFVKL 100
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
Y E++ + G L ++ E R YT ++V A+ LH I+HR
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKGIIHR 159
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+K NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + +
Sbjct: 160 DLKPENILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC-- 215
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
++ D+W+LGC++ ++ +G P+ N ++F+ + P + + + E L
Sbjct: 216 -KSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLL 272
Query: 248 RHDPAQRATIFE------LLQHPFL 266
D +R E L HPF
Sbjct: 273 VLDATKRLGCEEMEGYGPLKAHPFF 297
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L E +++ DFG+A K+ + + N FVGT Y++PE+ + + ++ D
Sbjct: 165 NILLN-EDMHIQITDFGTA-KVLSPESKQARANXFVGTAQYVSPELLTEKSAC---KSSD 219
Query: 370 IWSLGCVLVEMSSG 383
+W+LGC++ ++ +G
Sbjct: 220 LWALGCIIYQLVAG 233
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 46 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 104
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 162
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 163 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 215
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 216 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 180 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 231
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 232 IMAELLTGRTLFPG 245
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 10 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 65
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G + ++ + + C +L + E + + +Q + LH +
Sbjct: 66 ILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E ++K+GDFG A + S + + G+ +MAPEV +
Sbjct: 125 IIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQD 182
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
K + D+++ G VL E+ +G+ P++ ++ QI+F VG G +P + + S+ +A
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R ++L
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL 264
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E ++K+GDFG A + S + + G+ +MAPEV +K + D
Sbjct: 134 NIFL-HEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 192 VYAFGIVLYELMTGQLPYSNI 212
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 37 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 92
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G + ++ + + C +L + E + + +Q + LH +
Sbjct: 93 ILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 151
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E ++K+GDFG A + + + + G+ +MAPEV +
Sbjct: 152 IIHRDLKSNNIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
K + D+++ G VL E+ +G+ P++ ++ QI+F VG G +P + + S+ +A
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 269
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R ++L
Sbjct: 270 KRLMAECLKKKRDERPLFPQIL 291
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E ++K+GDFG A + + + + G+ +MAPEV +K + D
Sbjct: 161 NIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 218
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 219 VYAFGIVLYELMTGQLPYSNI 239
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 41 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 96
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 97 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 156
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 157 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEK 209
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMG--------ETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + GM E P PE +S
Sbjct: 210 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 265
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 266 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 173 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 225
Query: 380 MSSG 383
+ G
Sbjct: 226 LLCG 229
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 32 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 90
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 148
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 149 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 201
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 202 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 166 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 217
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 218 IMAELLTGRTLFPG 231
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 33 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 88
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 89 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 148
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEK 201
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 202 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 257
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 258 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 165 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 217
Query: 380 MSSG 383
+ G
Sbjct: 218 LLCG 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 119/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 32 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 90
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 148
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E + LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 149 SADIIHRDLKPSNLAVN-EDSELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 201
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 202 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E + LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 166 EDSELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 217
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 218 IMAELLTGRTLFPG 231
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 32 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 87
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 88 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 147
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEK 200
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 201 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 256
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 257 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 289
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 164 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 216
Query: 380 MSSG 383
+ G
Sbjct: 217 LLCG 220
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 26 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 81
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 82 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 141
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEK 194
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 195 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 250
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 251 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 283
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 158 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 210
Query: 380 MSSG 383
+ G
Sbjct: 211 LLCG 214
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 30 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 87
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 145
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 146 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 202
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 203 YTKSIDIWSVGCILAEMLSNR 223
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 151 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 207
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 208 DIWSVGCILAEMLSNRPIFPG 228
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 119/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 28 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 86
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 144
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E + LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 145 SADIIHRDLKPSNLAVN-EDSELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 197
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 198 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E + LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 162 EDSELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 213
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 214 IMAELLTGRTLFPG 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 34 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 91
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 149
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 150 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 206
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 207 YTKSIDIWSVGCILAEMLSNR 227
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 155 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 211
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 212 DIWSVGCILAEMLSNRPIFPG 232
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 8 VSP---GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNL 64
VSP G G +G V +A++ +GE VA+K++ Q++ F K EL +L+ + +N+
Sbjct: 45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENV 103
Query: 65 VKYYGVEIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHEN 122
+ V + F + L L + E ++ Q++ + +H
Sbjct: 104 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA 163
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDT 182
+VHRD+K N+ + E LK+ DFG A A E+ G+V T+ Y APEV +
Sbjct: 164 GVVHRDLKPGNLAVN-EDCELKILDFGLARHADA------EMTGYVVTRWYRAPEVIL-- 214
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGK 207
+ + + + VDIWS+GC++ EM +GK
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGK 239
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG A A E+ G+V T+ Y APEV + + + + + VDIWS+GC
Sbjct: 179 EDCELKILDFGLARHADA------EMTGYVVTRWYRAPEVIL--SWMHYNQTVDIWSVGC 230
Query: 376 VLVEMSSGKTNLSG 389
++ EM +GKT G
Sbjct: 231 IMAEMLTGKTLFKG 244
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 25 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 80
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 81 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEK 193
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 194 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 249
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 157 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 209
Query: 380 MSSG 383
+ G
Sbjct: 210 LLCG 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 11/255 (4%)
Query: 1 MSSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGIN 60
++ F + G+G FGKV A T EL A+K ++ V+ +VE R+L ++
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 61 QKN-LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL 119
+ L + + + + ME G L +Q E Y ++ + L
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISIGLFFL 136
Query: 120 HENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
H+ I++RD+K N+ L +EG+ +K+ DFG H F GT Y+APE+
Sbjct: 137 HKRGIIYRDLKLDNVMLDSEGH-IKIADFGMC---KEHMMDGVTTREFCGTPDYIAPEII 192
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
+G++VD W+ G +L EM +G+ P+ D + +F+ M + P+SLS E
Sbjct: 193 AYQP---YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE--LFQSIMEHNVSYPKSLSKEA 247
Query: 240 QAFAELCLRHDPAQR 254
+ + + PA+R
Sbjct: 248 VSICKGLMTKHPAKR 262
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ L +EG+ +K+ DFG H F GT Y+APE+ +G++VD
Sbjct: 150 NVMLDSEGH-IKIADFGMC---KEHMMDGVTTREFCGTPDYIAPEIIAYQP---YGKSVD 202
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
W+ G +L EM +G+ G
Sbjct: 203 WWAYGVLLYEMLAGQPPFDG 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQND-ARFVKDMLVELRILEGINQKNLVKYYG 69
G G FGKVY A G+ VA+K + D ++ ++++ E ++ + N++ G
Sbjct: 16 GIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV---H 126
V + + L ME G L V S + P++LV + Q+ ++ LH+ IV H
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNR-VLSGKRIPPDILVN-WAVQIARGMNYLHDEAIVPIIH 131
Query: 127 RDIKSANIFLTAE-------GNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
RD+KS+NI + + LK+ DFG A + T + G A+MAPEV
Sbjct: 132 RDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-----AGAYAWMAPEVI 186
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP-TIPESLSDE 238
+ + D+WS G +L E+ +G+ P+ D + + V M + IP + +
Sbjct: 187 RASM---FSKGSDVWSYGVLLWELLTGEVPFRGIDG-LAVAYGVAMNKLALPIPSTCPEP 242
Query: 239 GQAFAELCLRHDPAQRATIFELLQH 263
E C DP R + +L
Sbjct: 243 FAKLMEDCWNPDPHSRPSFTNILDQ 267
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 31 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 86
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 87 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 146
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEK 199
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 200 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 255
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 256 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 288
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 163 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 215
Query: 380 MSSG 383
+ G
Sbjct: 216 LLCG 219
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 40 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 97
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 98 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 155
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 156 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 212
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 213 YTKSIDIWSVGCILAEMLSNR 233
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 161 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 217
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 218 DIWSVGCILAEMLSNRPIFPG 238
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 32 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 89
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 148 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 204
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNR 225
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 153 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 209
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 210 DIWSVGCILAEMLSNRPIFPG 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 37 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 94
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 152
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 153 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 209
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 210 YTKSIDIWSVGCILAEMLSNR 230
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 158 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 214
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 215 DIWSVGCILAEMLSNRPIFPG 235
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 38 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 95
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 153
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 154 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 210
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 211 YTKSIDIWSVGCILAEMLSNR 231
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 159 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 215
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 216 DIWSVGCILAEMLSNRPIFPG 236
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 29 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 86
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 144
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 145 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 201
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 202 YTKSIDIWSVGCILAEMLSNR 222
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 150 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 207 DIWSVGCILAEMLSNRPIFPG 227
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 93
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 152 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 208
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 157 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 213
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 214 DIWSVGCILAEMLSNRPIFPG 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 8 VSP---GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNL 64
VSP G G +G V +A++ +GE VA+K++ Q++ F K EL +L+ + +N+
Sbjct: 27 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAYRELLLLKHMQHENV 85
Query: 65 VKYYGVEIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHEN 122
+ V + F + L L + E ++ Q++ + +H
Sbjct: 86 IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA 145
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDT 182
+VHRD+K N+ + E LK+ DFG A A E+ G+V T+ Y APEV +
Sbjct: 146 GVVHRDLKPGNLAVN-EDCELKILDFGLARHADA------EMTGYVVTRWYRAPEVIL-- 196
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGK 207
+ + + + VDIWS+GC++ EM +GK
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGK 221
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG A A E+ G+V T+ Y APEV + + + + + VDIWS+GC
Sbjct: 161 EDCELKILDFGLARHADA------EMTGYVVTRWYRAPEVIL--SWMHYNQTVDIWSVGC 212
Query: 376 VLVEMSSGKTNLSG 389
++ EM +GKT G
Sbjct: 213 IMAEMLTGKTLFKG 226
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKD----MLVELRILEGINQKNLVK 66
G+G FGKV+ A +T + A+K ++ D + D +VE R+L + +
Sbjct: 27 GKGSFGKVFLAEFKKTNQFFAIKALK----KDVVLMDDDVECTMVEKRVLSLAWEHPFLT 82
Query: 67 YYGVEIHREEMVLF-MELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
+ +E + F ME G L +QS Y +++ + LH IV
Sbjct: 83 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIV 141
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+RD+K NI L +G+ +K+ DFG + + N F GT Y+APE+ + K
Sbjct: 142 YRDLKLDNILLDKDGH-IKIADFGMC---KENMLGDAKTNEFCGTPDYIAPEILL-GQKY 196
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAEL 245
H +VD WS G +L EM G+ P+ D + +F + P P L E +
Sbjct: 197 NH--SVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMDNPFYPRWLEKEAKDLLVK 252
Query: 246 CLRHDPAQRATIF-ELLQHP-FLIVSCEE 272
+P +R + ++ QHP F ++ EE
Sbjct: 253 LFVREPEKRLGVRGDIRQHPLFREINWEE 281
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L +G+ +K+ DFG + + N F GT Y+APE+ + K H +VD
Sbjct: 149 NILLDKDGH-IKIADFGMC---KENMLGDAKTNEFCGTPDYIAPEILL-GQKYNH--SVD 201
Query: 370 IWSLGCVLVEMSSGKTNLSG 389
WS G +L EM G++ G
Sbjct: 202 WWSFGVLLYEMLIGQSPFHG 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 52 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 109
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 110 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 167
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 168 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 224
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 225 YTKSIDIWSVGCILAEMLSNR 245
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 173 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 229
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 230 DIWSVGCILAEMLSNRPIFPG 250
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 93
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 152 RDLKPSNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 208
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 157 SNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 213
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 214 DIWSVGCILAEMLSNRPIFPG 234
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 30 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 87
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 145
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 146 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 202
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 203 YTKSIDIWSVGCILAEMLSNR 223
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 151 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 207
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 208 DIWSVGCILAEMLSNRPIFPG 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 32 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 89
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 148 RDLKPSNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 204
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNR 225
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 153 SNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 209
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 210 DIWSVGCILAEMLSNRPIFPG 230
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 27 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 82
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEK 195
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 196 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 251
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 159 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 211
Query: 380 MSSG 383
+ G
Sbjct: 212 LLCG 215
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 30 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 85
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G + ++ + + C +L + E + + +Q + LH +
Sbjct: 86 ILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 144
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E ++K+GDFG A + S + + G+ +MAPEV +
Sbjct: 145 IIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQD 202
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
K + D+++ G VL E+ +G+ P++ ++ QI+F VG G +P + + S+ +A
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 262
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R ++L
Sbjct: 263 KRLMAECLKKKRDERPLFPQIL 284
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E ++K+GDFG A + S + + G+ +MAPEV +K + D
Sbjct: 154 NIFL-HEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 211
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 212 VYAFGIVLYELMTGQLPYSNI 232
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 32 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 89
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 148 RDLKPSNLLLNTTXD-LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 204
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNR 225
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 153 SNLLLNTTXD-LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 209
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 210 DIWSVGCILAEMLSNRPIFPG 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 32 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 89
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 148 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 204
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNR 225
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 153 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 209
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 210 DIWSVGCILAEMLSNRPIFPG 230
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NAMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 32 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 89
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 147
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 148 RDLKPSNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 204
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 205 YTKSIDIWSVGCILAEMLSNR 225
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 153 SNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 209
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 210 DIWSVGCILAEMLSNRPIFPG 230
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 114/224 (50%), Gaps = 17/224 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++ V
Sbjct: 41 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVIGLLDV 99
Query: 71 EIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
+ F + L T L ++V+ + L + V+ Q++ + +H I+
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADII 157
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N +
Sbjct: 158 HRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWM 208
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
+ + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 252
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 170 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 221
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 222 IMAELLTGRTLFPG 235
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 117/219 (53%), Gaps = 30/219 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQN--DA-RFVKDMLVELRILEGINQKNLVKY 67
G+G +G V+ +++ TGE+VA+K+I QN DA R +++++ + N NL+
Sbjct: 18 GKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNV 77
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYT-KQLVDAISALHENTIVH 126
+ R+ ++F + T+ L +++++ + E + ++Y QL+ I LH ++H
Sbjct: 78 LRADNDRDVYLVFDYMETD--LHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLH 132
Query: 127 RDIKSANIFLTAEGNSLKLGDFG---SAVKISAHT-TVPGELN--------------GFV 168
RD+K +NI L AE + +K+ DFG S V I T +P +N +V
Sbjct: 133 RDMKPSNILLNAECH-VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 169 GTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGK 207
T+ Y APE+ + + K G +D+WSLGC+L E+ GK
Sbjct: 192 ATRWYRAPEILLGSTKYTKG--IDMWSLGCILGEILCGK 228
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 21/99 (21%)
Query: 309 ANIFLTAEGNSLKLGDFG---SAVKISAHTT-VPGELN--------------GFVGTQAY 350
+NI L AE + +K+ DFG S V I T +P +N +V T+ Y
Sbjct: 138 SNILLNAECH-VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWY 196
Query: 351 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKTNLSG 389
APE+ + + K G +D+WSLGC+L E+ GK G
Sbjct: 197 RAPEILLGSTKYTKG--IDMWSLGCILGEILCGKPIFPG 233
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 25 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 80
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 81 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTEPCYTPYYVAPEVL---GPEK 193
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 194 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 249
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 157 LKLTDFGFAKETTSHNS----LTEPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 209
Query: 380 MSSG 383
+ G
Sbjct: 210 LLCG 213
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 71 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 126
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 127 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 186
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEK 239
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 240 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 295
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 203 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 255
Query: 380 MSSG 383
+ G
Sbjct: 256 LLCG 259
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L +EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFL---TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYXQRTLREIKILLRFRHENIIGINDI 93
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 152 RDLKPSNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 208
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 157 SNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 213
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 214 DIWSVGCILAEMLSNRPIFPG 234
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 93
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L++ L + + Q++ + +H ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKCQH--LSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 152 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 208
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 157 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 213
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 214 DIWSVGCILAEMLSNRPIFPG 234
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 24 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 82
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 83 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 140
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 141 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 193
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 194 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 240
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 158 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 209
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 210 IMAELLTGRTLFPG 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 31 NLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 89
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 147
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 148 SADIIHRDLKPSNLAVN-EDXELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 200
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 201 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 165 EDXELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 216
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 217 IMAELLTGRTLFPG 230
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FG V Y + + TG LVA+K++Q H D + +D E++IL+ ++ +VK
Sbjct: 19 GKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQ--RDFQREIQILKALHSDFIVK 75
Query: 67 YYGVEIH--REEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y GV R+ + L ME G L +Q L + Y+ Q+ + L
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 135
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV-----PGELNGFVGTQAYMAPEVF 179
VHRD+ + NI + +E + +K+ DFG A + PG+ F + APE
Sbjct: 136 VHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIF-----WYAPESL 189
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEM 203
D R D+WS G VL E+
Sbjct: 190 SDNI---FSRQSDVWSFGVVLYEL 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 10 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 65
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G ++ + + C +L + E + + +Q + LH +
Sbjct: 66 ILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E ++K+GDFG A + + + + G+ +MAPEV +
Sbjct: 125 IIHRDLKSNNIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
K + D+++ G VL E+ +G+ P++ ++ QI+F VG G +P + + S+ +A
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R ++L
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL 264
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E ++K+GDFG A + + + + G+ +MAPEV +K + D
Sbjct: 134 NIFL-HEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 192 VYAFGIVLYELMTGQLPYSNI 212
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 31 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 89
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 147
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 148 SADIIHRDLKPSNLAVN-EDXELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 200
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 201 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 165 EDXELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 216
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 217 IMAELLTGRTLFPG 230
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 16/271 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG + T ELVA+K I+ D ++++ + N+V++ V
Sbjct: 29 GSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINH----RSLRHPNIVRFKEV 84
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + ME + G L + E R + +QL+ +S H I HRD+K
Sbjct: 85 ILTPTHLAIIMEYASGGELYERI-CNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLK 143
Query: 131 SANIFLT-AEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N L + LK+ DFG + H+ + VGT AY+APEV + + G+
Sbjct: 144 LENTLLDGSPAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLL--RQEYDGK 197
Query: 190 AVDIWSLGCVLVEMSSGKRPW--AEYDSNYQIMFKVGMGETPTIPES--LSDEGQAFAEL 245
D+WS G L M G P+ E +Y+ + + +IP+ +S E
Sbjct: 198 IADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISR 257
Query: 246 CLRHDPAQRATIFELLQHPFLIVSCEEDVCN 276
DPA R +I E+ H + + + D+ N
Sbjct: 258 IFVADPATRISIPEIKTHSWFLKNLPADLMN 288
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LK+ DFG + H+ + VGT AY+APEV + + G+ D+WS G L
Sbjct: 157 LKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLL--RQEYDGKIADVWSCGVTLYV 210
Query: 380 MSSG 383
M G
Sbjct: 211 MLVG 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 27 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 82
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEK 195
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 196 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 251
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 159 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 211
Query: 380 MSSG 383
+ G
Sbjct: 212 LLCG 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 126/273 (46%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 77 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 132
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 133 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 192
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEK 245
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 246 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 301
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 302 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 334
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
LKL DFG A + ++H + L T Y+APEV + ++ D+WSLG ++
Sbjct: 209 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVL---GPEKYDKSCDMWSLGVIMYI 261
Query: 380 MSSG 383
+ G
Sbjct: 262 LLCG 265
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 80
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 138
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 139 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 191
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 192 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 156 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 207
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 208 IMAELLTGRTLFPG 221
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 38 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 93
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G + ++ + + C +L + E + + +Q + LH +
Sbjct: 94 ILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E ++K+GDFG A + S + + G+ +MAPEV +
Sbjct: 153 IIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQD 210
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
K + D+++ G VL E+ +G+ P++ ++ QI+F VG G +P + + S+ +A
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R ++L
Sbjct: 271 KRLMAECLKKKRDERPLFPQIL 292
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E ++K+GDFG A + S + + G+ +MAPEV +K + D
Sbjct: 162 NIFL-HEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 219
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 220 VYAFGIVLYELMTGQLPYSNI 240
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 31 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 89
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 147
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 148 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 200
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 201 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 165 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 216
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 217 IMAELLTGRTLFPG 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 91
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 149
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 150 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTA--DEMTGYVATRWYRAPEIML 202
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 203 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 167 EDCELKILDFG----LARHTA--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 218
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 219 IMAELLTGRTLFPG 232
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 91
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 149
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 150 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTA--DEMTGYVATRWYRAPEIML 202
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 203 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 167 EDCELKILDFG----LARHTA--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 218
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 219 IMAELLTGRTLFPG 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 23 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 81
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 139
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 140 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 192
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 193 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 157 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 208
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 209 IMAELLTGRTLFPG 222
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FG V Y + + TG LVA+K++Q H D + +D E++IL+ ++ +VK
Sbjct: 20 GKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQ--RDFQREIQILKALHSDFIVK 76
Query: 67 YYGVEIH--REEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y GV R+ + L ME G L +Q L + Y+ Q+ + L
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 136
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV-----PGELNGFVGTQAYMAPEVF 179
VHRD+ + NI + +E + +K+ DFG A + PG+ F + APE
Sbjct: 137 VHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIF-----WYAPESL 190
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEM 203
D R D+WS G VL E+
Sbjct: 191 SDNI---FSRQSDVWSFGVVLYEL 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FG V Y + + TG LVA+K++Q H D + +D E++IL+ ++ +VK
Sbjct: 32 GKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQ--RDFQREIQILKALHSDFIVK 88
Query: 67 YYGVEIH--REEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y GV R+ + L ME G L +Q L + Y+ Q+ + L
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 148
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV-----PGELNGFVGTQAYMAPEVF 179
VHRD+ + NI + +E + +K+ DFG A + PG+ F + APE
Sbjct: 149 VHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIF-----WYAPESL 202
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEM 203
D R D+WS G VL E+
Sbjct: 203 SDNI---FSRQSDVWSFGVVLYEL 223
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG+ A K I+ + + +R +++ E+ IL I N++
Sbjct: 14 GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITL 73
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ + ++ ++VL +EL + G L + E L E ++ KQ++D + LH I H
Sbjct: 74 HDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSKRIAHF 132
Query: 128 DIKSANIFL---TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +KL DFG A KI A E GT ++APE+ N
Sbjct: 133 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA----GNEFKNIFGTPEFVAPEI---VNY 185
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ ++ + + + E S+ +
Sbjct: 186 EPLGLEADMWSIGVITYILLSGASPFLG-ETKQETLTNISAVNYDFDEEYFSNTSELAKD 244
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + L+H ++
Sbjct: 245 FIRRLLVKDPKRRMTIAQSLEHSWI 269
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+KL DFG A KI A E GT ++APE+ N G D+WS+G +
Sbjct: 151 IKLIDFGIAHKIEA----GNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 203
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 204 LLSGASPFLG 213
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 91
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 149
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 150 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTA--DEMTGYVATRWYRAPEIML 202
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 203 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 167 EDCELKILDFG----LARHTA--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 218
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 219 IMAELLTGRTLFPG 232
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDXELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDXELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 37 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 95
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 153
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 154 SADIIHRDLKPSNLAVN-EDXELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 206
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 207 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 171 EDXELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 222
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 223 IMAELLTGRTLFPG 236
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 21/279 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ----LHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FGKV A + A+K +Q L K+ + + + V +L+ + LV
Sbjct: 47 GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV---LLKNVKHPFLVG 103
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
+ +++ ++ G L +Q E E R Y ++ A+ LH IV+
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVY 162
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K NI L ++G+ + L DFG + H + + F GT Y+APEV +K
Sbjct: 163 RDLKPENILLDSQGH-IVLTDFGLCKENIEHNST---TSTFCGTPEYLAPEVL---HKQP 215
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
+ R VD W LG VL EM G P+ Y N M+ + + + ++++ + E
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPF--YSRNTAEMYDNILNKPLQLKPNITNSARHLLEGL 273
Query: 247 LRHDPAQRA----TIFELLQHPFLIVSCEEDVCNPRSVP 281
L+ D +R E+ H F + +D+ N + P
Sbjct: 274 LQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITP 312
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI L ++G+ + L DFG + H + + F GT Y+APEV +K + R VD
Sbjct: 169 NILLDSQGH-IVLTDFGLCKENIEHNST---TSTFCGTPEYLAPEVL---HKQPYDRTVD 221
Query: 370 IWSLGCVLVEMSSG 383
W LG VL EM G
Sbjct: 222 WWCLGAVLYEMLYG 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 23 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 81
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 139
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 140 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 192
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 193 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 157 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 208
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 209 IMAELLTGRTLFPG 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 49 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 107
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 165
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 166 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 218
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 219 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 183 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 234
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 235 IMAELLTGRTLFPG 248
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 28 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 86
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 144
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 145 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 197
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 198 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 162 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 213
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 214 IMAELLTGRTLFPG 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 91
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 149
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 150 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 202
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 203 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 167 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 218
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 219 IMAELLTGRTLFPG 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 38 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 96
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 154
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 155 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 207
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 208 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 172 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 223
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 224 IMAELLTGRTLFPG 237
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 28 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 86
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 144
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 145 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 197
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 198 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 162 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 213
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 214 IMAELLTGRTLFPG 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 38 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 96
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 154
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 155 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 207
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 208 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 172 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 223
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 224 IMAELLTGRTLFPG 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 31 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 89
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 147
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 148 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 200
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 201 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 165 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 216
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 217 IMAELLTGRTLFPG 230
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 25 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 83
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 141
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 142 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 194
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 195 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 241
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 159 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 210
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 211 IMAELLTGRTLFPG 224
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+++I + + + L E++IL +N++ +
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIRKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 93
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 152 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 208
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 157 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 213
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 214 DIWSVGCILAEMLSNRPIFPG 234
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 28 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 86
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 144
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 145 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 197
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 198 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 162 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 213
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 214 IMAELLTGRTLFPG 227
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 45 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 103
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 161
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 162 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 214
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 215 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 179 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 230
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 231 IMAELLTGRTLFPG 244
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 46 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 104
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 162
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 163 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 215
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 216 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 180 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 231
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 232 IMAELLTGRTLFPG 245
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 20/270 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK---EIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G F +V +TG++ AMK + + K+ + ++ E +L +++ + +
Sbjct: 70 GRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE---ERDVLVNGDRRWITQL 126
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ + L ME G L +L+ + +P + R Y ++V AI ++H VHR
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DIK NI L G+ ++L DFGS +K+ A TV + VGT Y++PE+
Sbjct: 187 DIKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVA--VGTPDYLSPEILQAVGGGPG 243
Query: 188 GRA----VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGET----PTIPESLSDEG 239
+ D W+LG EM G+ P+ DS + K+ + P + E + +E
Sbjct: 244 TGSYGPECDWWALGVFAYEMFYGQTPFYA-DSTAETYGKIVHYKEHLSLPLVDEGVPEEA 302
Query: 240 QAFAE--LCLRHDPAQRATIFELLQHPFLI 267
+ F + LC R + HPF
Sbjct: 303 RDFIQRLLCPPETRLGRGGAGDFRTHPFFF 332
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA-- 367
NI L G+ ++L DFGS +K+ A TV + VGT Y++PE+ +
Sbjct: 192 NILLDRCGH-IRLADFGSCLKLRADGTVRSLVA--VGTPDYLSPEILQAVGGGPGTGSYG 248
Query: 368 --VDIWSLGCVLVEMSSGKTNLSGVVVSAEVFGS 399
D W+LG EM G+T +AE +G
Sbjct: 249 PECDWWALGVFAYEMFYGQTPFYA-DSTAETYGK 281
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEG 58
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 17 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKE 74
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RYT 109
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 75 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 134
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 135 GEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 193
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 194 VR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGL 248
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 249 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 37 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 95
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 153
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 154 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 206
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 207 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 171 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 222
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 223 IMAELLTGRTLFPG 236
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 38 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIH-AKRTYRELRLLKHMKHENVI 96
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 154
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 155 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 207
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 208 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 172 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 223
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 224 IMAELLTGRTLFPG 237
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 32 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 90
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 148
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 149 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 201
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 202 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 166 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 217
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 218 IMAELLTGRTLFPG 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 32 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 90
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 148
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 149 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 201
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 202 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 166 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 217
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 218 IMAELLTGRTLFPG 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 23/274 (8%)
Query: 3 SVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILE 57
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 11 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 68
Query: 58 GINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RY 108
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 69 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 128
Query: 109 TKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFV 168
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 129 AGEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 187
Query: 169 GTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE 227
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 188 PVR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGG 242
Query: 228 TPTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 243 LLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEG 58
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 21 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKE 78
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RYT 109
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 198 VR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGL 252
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 253 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 132/323 (40%), Gaps = 80/323 (24%)
Query: 11 GQGRFGKVYTAVNNETG-ELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN------ 63
G+G FG+V V++ G VA+K I+ N ++ + +E+ +LE IN+K+
Sbjct: 42 GEGTFGRVVQCVDHRRGGARVALKIIK----NVEKYKEAARLEINVLEKINEKDPDNKNL 97
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
V+ + + M + EL T + L + P VR QL A+ LH+N
Sbjct: 98 CVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNK 157
Query: 124 IVHRDIKSANIFL------------------TAEGNSLKLGDFGSAVKISAHTTVPGELN 165
+ H D+K NI + + ++++ DFGSA H +
Sbjct: 158 LTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHST----- 212
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQI-MFKVG 224
V T+ Y APEV ++ +G + D+WS+GC++ E G + +D+ + M +
Sbjct: 213 -IVSTRHYRAPEVILE---LGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERI 268
Query: 225 MGETPT-----------------------------------IPESLSDEGQAFAEL---- 245
+G P+ + L+ E + +L
Sbjct: 269 LGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLI 328
Query: 246 --CLRHDPAQRATIFELLQHPFL 266
L ++PA+R T+ E LQHPF
Sbjct: 329 ESMLEYEPAKRLTLGEALQHPFF 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 314 TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSL 373
+ + ++++ DFGSA H + V T+ Y APEV ++ +G + D+WS+
Sbjct: 189 SVKSTAVRVVDFGSATFDHEHHST------IVSTRHYRAPEVILE---LGWSQPCDVWSI 239
Query: 374 GCVLVEMSSGKT 385
GC++ E G T
Sbjct: 240 GCIIFEYYVGFT 251
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 6 FSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
F G G FG V+ +G +K I +K ++ + E+ +L+ ++ N++
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTI--NKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 66 KYYGVEIHREEMVLFMELCTEGTL-ESLVQSTEDG--LPEVLVRRYTKQLVDAISALHEN 122
K + V M + ME C G L E +V + G L E V KQ+++A++ H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 123 TIVHRDIKSANIFL--TAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEV 178
+VH+D+K NI T+ + +K+ DFG A K H+T GT YMAPEV
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHST------NAAGTALYMAPEV 197
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPW-----------AEY-DSNYQIMFKVGMG 226
F K DIWS G V+ + +G P+ A Y + NY + +
Sbjct: 198 F----KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECR---- 249
Query: 227 ETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
P P+++ + L DP +R + ++L H
Sbjct: 250 --PLTPQAVD-----LLKQMLTKDPERRPSAAQVLHH 279
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 314 TAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
T+ + +K+ DFG A K H+T GT YMAPEVF K DIW
Sbjct: 160 TSPHSPIKIIDFGLAELFKSDEHST------NAAGTALYMAPEVF----KRDVTFKCDIW 209
Query: 372 SLGCVLVEMSSGKTNLSG 389
S G V+ + +G +G
Sbjct: 210 SAGVVMYFLLTGCLPFTG 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 49 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 107
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 165
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 166 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMXGYVATRWYRAPEIML 218
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 219 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 183 EDCELKILDFG----LARHTD--DEMXGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 234
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 235 IMAELLTGRTLFPG 248
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEG 58
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKE 84
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RYT 109
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 204 VR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGL 258
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +D+ E+ IL+ I N++
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V ++ +++L EL G L + E L E + KQ+++ + LH I H
Sbjct: 80 HEVYENKTDVILIGELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 128 DIKSANIFL---TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +K+ DFG A KI E GT ++APE+ N
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNY 191
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ D+ + + V E S+ +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKD 250
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R TI + LQHP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG A KI E GT ++APE+ N G D+WS+G +
Sbjct: 157 IKIIDFGLAHKID----FGNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 209
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 210 LLSGASPFLG 219
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 36/240 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ------LHKQNDARFVKDMLVELRILEGINQKNL 64
G G +G V +A + + VA+K++ +H + R ELR+L+ + +N+
Sbjct: 37 GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-------ELRLLKHLKHENV 89
Query: 65 VKYYGVEIHREEMVLFMELCTEGTL-----ESLVQSTEDGLPEVLVRRYTKQLVDAISAL 119
+ V + F E+ TL ++V+S L + V+ QL+ + +
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS--QALSDEHVQFLVYQLLRGLKYI 147
Query: 120 HENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
H I+HRD+K +N+ + E + L++ DFG A + E+ G+V T+ Y APE+
Sbjct: 148 HSAGIIHRDLKPSNVAVN-EDSELRILDFGLARQADE------EMTGYVATRWYRAPEIM 200
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKR--PWAEY-DSNYQIMFKVGMGETPTIPESLS 236
+ N + + + VDIWS+GC++ E+ GK P ++Y D +IM VG TP+ PE L+
Sbjct: 201 L--NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG---TPS-PEVLA 254
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E + L++ DFG A + E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 166 EDSELRILDFGLARQADE------EMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 217
Query: 376 VLVEMSSGKTNLSG 389
++ E+ GK G
Sbjct: 218 IMAELLQGKALFPG 231
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 15/260 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G GRFG+V+ TG +A K I+ D VK+ E+ ++ ++ NL++ Y
Sbjct: 98 GGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN---EISVMNQLDHANLIQLYDA 154
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ ++VL ME G L + L E+ + KQ+ + I +H+ I+H D+K
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLK 214
Query: 131 SANIF-LTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
NI + + +K+ DFG A + +L GT ++APEV N
Sbjct: 215 PENILCVNRDAKQIKIIDFGLARRYKPRE----KLKVNFGTPEFLAPEV---VNYDFVSF 267
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE---SLSDEGQAFAELC 246
D+WS+G + + SG P+ D++ + + + E +S+E + F
Sbjct: 268 PTDMWSVGVIAYMLLSGLSPFLG-DNDAETLNNILACRWDLEDEEFQDISEEAKEFISKL 326
Query: 247 LRHDPAQRATIFELLQHPFL 266
L + + R + E L+HP+L
Sbjct: 327 LIKEKSWRISASEALKHPWL 346
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 26/177 (14%)
Query: 96 TEDG-LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--V 152
TE G L E L R + Q+++A+ H ++HRDIK NI + LKL DFGS +
Sbjct: 149 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 208
Query: 153 KISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAE 212
K + +T F GT+ Y PE ++ ++ HGR+ +WSLG +L +M G P+ E
Sbjct: 209 KDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRSAAVWSLGILLYDMVCGDIPF-E 258
Query: 213 YDSNY---QIMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+D Q+ F+ + +S E Q CL P+ R T E+ HP++
Sbjct: 259 HDEEIIRGQVFFR----------QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 310 NIFLTAEGNSLKLGDFGSA--VKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
NI + LKL DFGS +K + +T F GT+ Y PE ++ ++ HGR+
Sbjct: 187 NILIDLNRGELKLIDFGSGALLKDTVYTD-------FDGTRVYSPPE-WIRYHRY-HGRS 237
Query: 368 VDIWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 238 AAVWSLGILLYDMVCG 253
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 128/304 (42%), Gaps = 52/304 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHK--QNDARFVKDMLVELRILEGINQKNLVKYY 68
GQG +G V A+ N+T + A+K + +K Q + + V+ + E+R+++ ++ N+ + Y
Sbjct: 35 GQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLY 94
Query: 69 GVEIHREEMVLFMELC---------------------------------------TEGTL 89
V + + L MELC G++
Sbjct: 95 EVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSI 154
Query: 90 ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIKSAN-IFLTAEGNSLKLGDF 148
+S + E L+ +Q+ A+ LH I HRDIK N +F T + +KL DF
Sbjct: 155 HGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDF 214
Query: 149 GSAVKISAHTTVPGELNGFV---GTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS 205
G + + + GE G GT ++APEV TN+ +G D WS G +L +
Sbjct: 215 GLSKEF--YKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE-SYGPKCDAWSAGVLLHLLLM 271
Query: 206 GKRPWA---EYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
G P+ + D+ Q++ K E P LS + L + +R LQ
Sbjct: 272 GAVPFPGVNDADTISQVLNKKLCFENPNY-NVLSPLARDLLSNLLNRNVDERFDAMRALQ 330
Query: 263 HPFL 266
HP++
Sbjct: 331 HPWI 334
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 311 IFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFV---GTQAYMAPEVFMDTNKVGHGRA 367
+F T + +KL DFG + + + GE G GT ++APEV TN+ +G
Sbjct: 200 LFSTNKSFEIKLVDFGLSKEF--YKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE-SYGPK 256
Query: 368 VDIWSLGCVLVEMSSGKTNLSGV 390
D WS G +L + G GV
Sbjct: 257 CDAWSAGVLLHLLLMGAVPFPGV 279
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 46 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 104
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 162
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G V T+ Y APE+ +
Sbjct: 163 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMXGXVATRWYRAPEIML 215
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 216 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 180 EDCELKILDFG----LARHTD--DEMXGXVATRWYRAPEIML--NWMHYNQTVDIWSVGC 231
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 232 IMAELLTGRTLFPG 245
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG V+ A G VA+K I + + A V + L E+ I++ + N+V + G
Sbjct: 46 GAGSFGTVHRA--EWHGSDVAVK-ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQST--EDGLPEVLVRRYTKQLVDAISALHENT--IVH 126
+ + E + G+L L+ + + L E + ++ LH IVH
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
R++KS N+ L + ++K+ DFG + ++ A T + + GT +MAPEV D
Sbjct: 163 RNLKSPNL-LVDKKYTVKVCDFGLS-RLKASTFLSSK--SAAGTPEWMAPEVLRDE---P 215
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMG-ETPTIPESLSDEGQAFAEL 245
D++S G +L E+++ ++PW + Q++ VG + IP +L+ + A E
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNP-AQVVAAVGFKCKRLEIPRNLNPQVAAIIEG 274
Query: 246 CLRHDPAQR---ATIFELLQ 262
C ++P +R ATI +LL+
Sbjct: 275 CWTNEPWKRPSFATIMDLLR 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 21/261 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG V+ A G VA+K I + + A V + L E+ I++ + N+V + G
Sbjct: 46 GAGSFGTVHRA--EWHGSDVAVK-ILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQST--EDGLPEVLVRRYTKQLVDAISALHENT--IVH 126
+ + E + G+L L+ + + L E + ++ LH IVH
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162
Query: 127 RDIKSANIFLTAEGNSLKLGDFG-SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
RD+KS N+ L + ++K+ DFG S +K S GT +MAPEV D
Sbjct: 163 RDLKSPNL-LVDKKYTVKVCDFGLSRLKASXFLXS----KXAAGTPEWMAPEVLRDE--- 214
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMG-ETPTIPESLSDEGQAFAE 244
D++S G +L E+++ ++PW + Q++ VG + IP +L+ + A E
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNP-AQVVAAVGFKCKRLEIPRNLNPQVAAIIE 273
Query: 245 LCLRHDPAQR---ATIFELLQ 262
C ++P +R ATI +LL+
Sbjct: 274 GCWTNEPWKRPSFATIMDLLR 294
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEG 58
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 14 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKE 71
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RYT 109
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 191 VR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGL 245
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 246 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEG 58
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 18 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKE 75
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RYT 109
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 76 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 135
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 136 GEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 195 VR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGL 249
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 250 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEG 58
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 21 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKE 78
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RYT 109
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 197
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 198 VR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGL 252
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 253 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEG 58
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 20 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKE 77
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RYT 109
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 197 VR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGL 251
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 252 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEG 58
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 49 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKE 106
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RYT 109
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 107 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 166
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 167 GEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 225
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 226 VR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGL 280
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 281 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEG 58
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 20 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKE 77
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RYT 109
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 197 VR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGL 251
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 252 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 118/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ D+G ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDYG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ D+G ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDYG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 93
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 151
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L V T+ Y APE+ + N G
Sbjct: 152 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML--NSKG 208
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L V T+ Y APE+ + N G+ +++
Sbjct: 157 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML--NSKGYTKSI 213
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 214 DIWSVGCILAEMLSNRPIFPG 234
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 37 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ--TYCQRTLREIKILLRFRHENIIGINDI 94
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V ++ E L L+++ L + + Q++ + +H ++H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 152
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L V T+ Y APE+ + N G
Sbjct: 153 RDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML--NSKG 209
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 210 YTKSIDIWSVGCILAEMLSNR 230
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L V T+ Y APE+ + N G+ +++
Sbjct: 158 SNLLLNTTCD-LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML--NSKGYTKSI 214
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 215 DIWSVGCILAEMLSNRPIFPG 235
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 23/273 (8%)
Query: 4 VTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEG 58
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKE 84
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RYT 109
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 144
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNC-MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 204 VR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGGL 258
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGXVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDFG----LARHTD--DEMTGXVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG+ A K I+ + + +R +++ E+ IL I N++
Sbjct: 21 GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITL 80
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ + ++ ++VL +EL + G L + E L E ++ KQ++D + LH I H
Sbjct: 81 HDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSKRIAHF 139
Query: 128 DIKSANIFL---TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +KL DFG A KI A E GT ++APE+ N
Sbjct: 140 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA----GNEFKNIFGTPEFVAPEI---VNY 192
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ ++ + + + E S+ +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLG-ETKQETLTNISAVNYDFDEEYFSNTSELAKD 251
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R I + L+H ++
Sbjct: 252 FIRRLLVKDPKRRMXIAQSLEHSWI 276
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+KL DFG A KI A E GT ++APE+ N G D+WS+G +
Sbjct: 158 IKLIDFGIAHKIEA----GNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 210
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 211 LLSGASPFLG 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 19/251 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G + VY + T LVA+KEI+L + A + E+ +L+ + N+V + +
Sbjct: 11 GEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCT--AIREVSLLKDLKHANIVTLHDI 68
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
IH E+ + + + L+ + + + V+ + QL+ ++ H ++HRD+K
Sbjct: 69 -IHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + G LKL DFG A S T + V T Y P++ + + +
Sbjct: 128 PQNLLINERG-ELKLADFGLARAKSIPTKT---YDNEVVTLWYRPPDILLGS--TDYSTQ 181
Query: 191 VDIWSLGCVLVEMSSGKR--PWAEYDSNYQIMFKV-GMGETPTIPESLSDE-------GQ 240
+D+W +GC+ EM++G+ P + + +F++ G T P LS+E +
Sbjct: 182 IDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPK 241
Query: 241 AFAELCLRHDP 251
AE L H P
Sbjct: 242 YRAEALLSHAP 252
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L E LKL DFG A S T + V T Y P++ + + + +D+W
Sbjct: 131 LLINERGELKLADFGLARAKSIPTKT---YDNEVVTLWYRPPDILLGS--TDYSTQIDMW 185
Query: 372 SLGCVLVEMSSGKTNLSGVVVSAEV 396
+GC+ EM++G+ G V ++
Sbjct: 186 GVGCIFYEMATGRPLFPGSTVEEQL 210
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DF ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDF----YLARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DF ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDF----YLARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G V +A +N VA+K+I + + + L E++IL +N++ +
Sbjct: 52 GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT--YCQRTLREIKILLRFRHENIIGINDI 109
Query: 71 ----EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
I + + V + L L+++ L + + Q++ + +H ++H
Sbjct: 110 IRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLH 167
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+K +N+ L + LK+ DFG A G L +V T+ Y APE+ + N G
Sbjct: 168 RDLKPSNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKG 224
Query: 187 HGRAVDIWSLGCVLVEMSSGK 207
+ +++DIWS+GC+L EM S +
Sbjct: 225 YTKSIDIWSVGCILAEMLSNR 245
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+N+ L + LK+ DFG A G L +V T+ Y APE+ + N G+ +++
Sbjct: 173 SNLLLNTTXD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML--NSKGYTKSI 229
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC+L EM S + G
Sbjct: 230 DIWSVGCILAEMLSNRPIFPG 250
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 23/274 (8%)
Query: 3 SVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILE 57
+T S GQG FG VY V +E VA+K + R + L E +++
Sbjct: 13 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 70
Query: 58 GINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-------PEVLVR--RY 108
N ++V+ GV + ++ MEL T G L+S ++S + P L + +
Sbjct: 71 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 130
Query: 109 TKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFV 168
++ D ++ L+ N VHRD+ + N + AE ++K+GDFG I G +
Sbjct: 131 AGEIADGMAYLNANKFVHRDLAARNCXV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 169 GTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE 227
+ +M+PE D + D+WS G VL E+++ ++P+ SN Q++ V G
Sbjct: 190 PVR-WMSPESLKDGVFTTYS---DVWSFGVVLWEIATLAEQPYQGL-SNEQVLRFVMEGG 244
Query: 228 TPTIPESLSDEGQAFAELCLRHDPAQRATIFELL 261
P++ D +C +++P R + E++
Sbjct: 245 LLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 22/293 (7%)
Query: 6 FSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
F + G G F +V A TG+L A+K I K+ + E+ +L I +N+V
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIP--KKALKGKESSIENEIAVLRKIKHENIV 83
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL-PEVLVRRYTKQLVDAISALHENTI 124
+ + L M+L + G L + E G E +Q++DA+ LH I
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRI--VEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 125 VHRDIKSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDT 182
VHRD+K N+ + E + + + DFG + K+ V ++ GT Y+APEV
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLS-KMEGKGDV---MSTACGTPGYVAPEVLAQK 197
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMG-----ETPTIPESLSD 237
+ +AVD WS+G + + G P+ YD N +F+ + ++P + +SD
Sbjct: 198 ---PYSKAVDCWSIGVIAYILLCGYPPF--YDENDSKLFEQILKAEYEFDSPYW-DDISD 251
Query: 238 EGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLK 290
+ F + DP +R T + +HP++ + SV A + +++ K
Sbjct: 252 SAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNFAK 304
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 290 KLGIVLPPMSEDSVKVYARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQA 349
++GIV + +++ Y++ E + + + DFG + K+ V ++ GT
Sbjct: 138 RMGIVHRDLKPENLLYYSQD------EESKIMISDFGLS-KMEGKGDV---MSTACGTPG 187
Query: 350 YMAPEVFMDTNKVGHGRAVDIWSLGCV 376
Y+APEV + +AVD WS+G +
Sbjct: 188 YVAPEVLAQK---PYSKAVDCWSIGVI 211
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 28/286 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQ-NDARFVKDMLVELRILE-GINQKNLVKYY 68
G+G+F V ++ TG+ A K ++ ++ D R ++L E+ +LE + ++ +
Sbjct: 38 GRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCR--AEILHEIAVLELAKSCPRVINLH 95
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVL-------VRRYTKQLVDAISALHE 121
V + E++L +E G + SL LPE+ V R KQ+++ + LH+
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLC------LPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 122 NTIVHRDIKSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
N IVH D+K NI L++ +K+ DFG + KI H EL +GT Y+APE+
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI-GHAC---ELREIMGTPEYLAPEIL 205
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSN--YQIMFKVGMGETPTIPESLSD 237
N A D+W++G + + + P+ D+ Y + +V + + S+S
Sbjct: 206 ---NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQ 262
Query: 238 EGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPAS 283
F + L +P +R T L H +L E++ +P +S
Sbjct: 263 LATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSS 308
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCV 376
+K+ DFG + KI H EL +GT Y+APE+ N A D+W++G +
Sbjct: 173 IKIVDFGMSRKI-GHAC---ELREIMGTPEYLAPEIL---NYDPITTATDMWNIGII 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 123/262 (46%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 14 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 69
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G + ++ + + C +L + ++E + +Q + LH +
Sbjct: 70 ILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 128
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E N++K+GDFG A + + + + G+ +MAPEV +
Sbjct: 129 IIHRDLKSNNIFL-HEDNTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
+ D+++ G VL E+ +G+ P++ ++ QI+ VG G +P + + S+ +
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 246
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R + +L
Sbjct: 247 KRLMAECLKKKRDERPSFPRIL 268
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E N++K+GDFG A + + + + G+ +MAPEV + + D
Sbjct: 138 NIFL-HEDNTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 195
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 196 VYAFGIVLYELMTGQLPYSNI 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG+ A K I+ + +R +++ E+ IL I N++
Sbjct: 35 GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITL 94
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ + ++ ++VL +EL + G L + E L E ++ KQ++D + LH I H
Sbjct: 95 HDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSKRIAHF 153
Query: 128 DIKSANIFL---TAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L +KL DFG A KI A E GT ++APE+ N
Sbjct: 154 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA----GNEFKNIFGTPEFVAPEI---VNY 206
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE---GQA 241
G D+WS+G + + SG P+ ++ + + + E S+ +
Sbjct: 207 EPLGLEADMWSIGVITYILLSGASPFLG-ETKQETLTNISAVNYDFDEEYFSNTSELAKD 265
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L DP +R I + L+H ++
Sbjct: 266 FIRRLLVKDPKRRMXIAQSLEHSWI 290
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+KL DFG A KI A E GT ++APE+ N G D+WS+G +
Sbjct: 172 IKLIDFGIAHKIEA----GNEFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 224
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 225 LLSGASPFLG 234
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 120/240 (50%), Gaps = 36/240 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ------LHKQNDARFVKDMLVELRILEGINQKNL 64
G G +G V +A + + VA+K++ +H + R ELR+L+ + +N+
Sbjct: 37 GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-------ELRLLKHLKHENV 89
Query: 65 VKYYGVEIHREEMVLFMELCTEGTL-----ESLVQSTEDGLPEVLVRRYTKQLVDAISAL 119
+ V + F E+ TL ++V+ L + V+ QL+ + +
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVYQLLRGLKYI 147
Query: 120 HENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
H I+HRD+K +N+ + E + L++ DFG A + E+ G+V T+ Y APE+
Sbjct: 148 HSAGIIHRDLKPSNVAVN-EDSELRILDFGLARQADE------EMTGYVATRWYRAPEIM 200
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKR--PWAEY-DSNYQIMFKVGMGETPTIPESLS 236
+ N + + + VDIWS+GC++ E+ GK P ++Y D +IM VG TP+ PE L+
Sbjct: 201 L--NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG---TPS-PEVLA 254
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E + L++ DFG A + E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 166 EDSELRILDFGLARQADE------EMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 217
Query: 376 VLVEMSSGKTNLSG 389
++ E+ GK G
Sbjct: 218 IMAELLQGKALFPG 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEI-----QLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G +G V +A ++ VA+K+I Q + Q R ++ +L+ R I ++++
Sbjct: 52 GEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQ-ILLRFRHENVIGIRDIL 110
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
+ +E R+ V ++ E L L++S + L + + Q++ + +H ++
Sbjct: 111 RASTLEAMRD--VYIVQDLMETDLYKLLKSQQ--LSNDHICYFLYQILRGLKYIHSANVL 166
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
HRD+K +N+ + + LK+ DFG A G L V T+ Y APE+ + N
Sbjct: 167 HRDLKPSNLLINTTCD-LKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML--NSK 223
Query: 186 GHGRAVDIWSLGCVLVEMSSGK 207
G+ +++DIWS+GC+L EM S +
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 319 SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLV 378
LK+ DFG A G L V T+ Y APE+ + N G+ +++DIWS+GC+L
Sbjct: 182 DLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML--NSKGYTKSIDIWSVGCILA 239
Query: 379 EMSSGKTNLSG 389
EM S + G
Sbjct: 240 EMLSNRPIFPG 250
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 36/240 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ------LHKQNDARFVKDMLVELRILEGINQKNL 64
G G +G V +A + + VA+K++ +H + R ELR+L+ + +N+
Sbjct: 29 GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-------ELRLLKHLKHENV 81
Query: 65 VKYYGVEIHREEMVLFMELCTEGTL-----ESLVQSTEDGLPEVLVRRYTKQLVDAISAL 119
+ V + F E+ TL ++V+ L + V+ QL+ + +
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVYQLLRGLKYI 139
Query: 120 HENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF 179
H I+HRD+K +N+ + E L++ DFG A + E+ G+V T+ Y APE+
Sbjct: 140 HSAGIIHRDLKPSNVAVN-EDCELRILDFGLARQADE------EMTGYVATRWYRAPEIM 192
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSSGKR--PWAEY-DSNYQIMFKVGMGETPTIPESLS 236
+ N + + + VDIWS+GC++ E+ GK P ++Y D +IM VG TP+ PE L+
Sbjct: 193 L--NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG---TPS-PEVLA 246
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E L++ DFG A + E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 158 EDCELRILDFGLARQADE------EMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 209
Query: 376 VLVEMSSGKTNLSG 389
++ E+ GK G
Sbjct: 210 IMAELLQGKALFPG 223
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 52 ELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQ 111
E+ +L N++ + G + ++ + + C +L + ++E + +Q
Sbjct: 70 EVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 112 LVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQ 171
+ LH +I+HRD+KS NIFL E N++K+GDFG A + S + + G+
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSI 186
Query: 172 AYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPT 230
+MAPEV + + D+++ G VL E+ +G+ P++ ++ QI+ VG G +P
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD 246
Query: 231 IPESLSDEGQAFAEL---CLRHDPAQRATIFELL 261
+ + S+ + L CL+ +R + +L
Sbjct: 247 LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E N++K+GDFG A + S + + G+ +MAPEV + + D
Sbjct: 150 NIFL-HEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 208 VYAFGIVLYELMTGQLPYSNI 228
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ FG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILGFG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ FG ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILGFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 22/168 (13%)
Query: 112 LVDAISALHENTIVHRDIKSANIFLTAE-GN--SLKLGDFGSAVKISAHTTVPGELNGFV 168
+ + LH +VHRD+K +NI E GN S+++ DFG A ++ A NG +
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE-------NGLL 177
Query: 169 GTQAY----MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFK 222
T Y +APEV + G+ A DIWSLG +L M +G P+A D+ +I+ +
Sbjct: 178 MTPCYTANFVAPEVL---ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILAR 234
Query: 223 VGMGE---TPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
+G G+ + S+SD + L DP QR T +L+HP+++
Sbjct: 235 IGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV 282
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 311 IFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAY----MAPEVFMDTNKVGH 364
+++ GN S+++ DFG A ++ A NG + T Y +APEV + G+
Sbjct: 148 LYVDESGNPESIRICDFGFAKQLRAE-------NGLLMTPCYTANFVAPEVL---ERQGY 197
Query: 365 GRAVDIWSLGCVLVEMSSGKTNLS-----------GVVVSAEVFGSGGWWFQV 406
A DIWSLG +L M +G T + + S + SGG+W V
Sbjct: 198 DAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ D G ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDAG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ D G ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDAG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ D G ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDRG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ D G ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDRG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 17/233 (7%)
Query: 40 QNDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTL-ESLVQSTED 98
+N +F +++ E+ +L+ ++ N++K + V ++ L E G L E ++ +
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK- 142
Query: 99 GLPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGN--SLKLGDFGSAVKISA 156
E KQ++ I LH++ IVHRDIK NI L + + ++K+ DFG +S+
Sbjct: 143 -FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFG----LSS 197
Query: 157 HTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSN 216
+ +L +GT Y+APEV K + D+WS G ++ + G P+ ++
Sbjct: 198 FFSKDYKLRDRLGTAYYIAPEVL----KKKYNEKCDVWSCGVIMYILLCGYPPFGG-QND 252
Query: 217 YQIMFKVGMGETP---TIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
I+ KV G+ +++SDE + +L L +D +R T E L ++
Sbjct: 253 QDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V A + +TG VA+K++ Q+ K ELR+L+ + +N++
Sbjct: 26 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 84
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 142
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ D G ++ HT E+ G+V T+ Y APE+ +
Sbjct: 143 SADIIHRDLKPSNLAVN-EDCELKILDGG----LARHTD--DEMTGYVATRWYRAPEIML 195
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP 229
N + + + VDIWS+GC++ E+ +G+ + D Q+ + + TP
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ D G ++ HT E+ G+V T+ Y APE+ + N + + + VDIWS+GC
Sbjct: 160 EDCELKILDGG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNQTVDIWSVGC 211
Query: 376 VLVEMSSGKTNLSG 389
++ E+ +G+T G
Sbjct: 212 IMAELLTGRTLFPG 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + ME ++G L ++ E G LP+++ Q+ ++
Sbjct: 74 KLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 129
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 130 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 180
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 239
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 240 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 266
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 43/273 (15%)
Query: 11 GQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G FGKV+ A + LVA+K ++ ++AR KD E +L + +++V
Sbjct: 22 GEGAFGKVFLAECYNLCPEQDKILVAVKTLK-DASDNAR--KDFHREAELLTNLQHEHIV 78
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQS--------TEDGLPEVLVRRYTKQLVDAIS 117
K+YGV + + +++ E G L +++ E P L + + I+
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 118 A----LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSA--------VKISAHTTVPGELN 165
A L VHRD+ + N L E +K+GDFG + ++ HT +P
Sbjct: 139 AGMVYLASQHFVHRDLATRNC-LVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR-- 195
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVG 224
+M PE M D+WSLG VL E+ + GK+PW + SN +++ +
Sbjct: 196 -------WMPPESIMYRKFTTES---DVWSLGVVLWEIFTYGKQPWYQL-SNNEVIECIT 244
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATI 257
G P + E C + +P R I
Sbjct: 245 QGRVLQRPRTCPQEVYELMLGCWQREPHMRKNI 277
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG+V+ A + G+ +K ++ + + R E++ L ++ N+V Y G
Sbjct: 20 GSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER-------EVKALAKLDHVNIVHYNGC 72
Query: 71 --------------EIHREEMVLF--MELCTEGTLESLVQSTE-DGLPEVLVRRYTKQLV 113
+ LF ME C +GTLE ++ + L +VL +Q+
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 114 DAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAY 173
+ +H +++RD+K +NIFL + +K+GDFG + G+ GT Y
Sbjct: 133 KGVDYIHSKKLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKN----DGKRXRSKGTLRY 187
Query: 174 MAPEVFMDTNKVGHGRAVDIWSLGCVLVEM 203
M+PE + +G+ VD+++LG +L E+
Sbjct: 188 MSPEQISSQD---YGKEVDLYALGLILAEL 214
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NIFL + +K+GDFG + G+ GT YM+PE + +G+ V
Sbjct: 151 SNIFL-VDTKQVKIGDFGLVTSLKN----DGKRXRSKGTLRYMSPEQISSQD---YGKEV 202
Query: 369 DIWSLGCVLVEM 380
D+++LG +L E+
Sbjct: 203 DLYALGLILAEL 214
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 123/297 (41%), Gaps = 59/297 (19%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILE----GINQKNLVK 66
G+G++ +V+ A+N E V +K ++ K+N + E++ILE G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK------REIKILENLRGGPNIITLAD 99
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
+ R ++F E + L Q+ L + +R Y +++ A+ H I+H
Sbjct: 100 IVKDPVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMH 154
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKV 185
RD+K N+ + E L+L D+G A PG E N V ++ + PE+ +D
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWG-----LAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETP 229
+ ++D+WSLGC+L M K P+ NY + ++ + P
Sbjct: 210 DY--SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 230 TIPESL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ L S E F + LR+D R T E ++HP+
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVMIDHEHRKLRLIDWGLA-----EFYHPGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV--NNETGEL-VAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + + E L VA+K + + R + L E + + ++VK
Sbjct: 47 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 104
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 105 IGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 163
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ L + + +KLGDFG + + T G + + +MAPE N
Sbjct: 164 DIAARNV-LVSSNDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIK-WMAPE---SINFRRF 217
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 218 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 276
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 277 WAYDPSRRPRFTEL 290
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 122/262 (46%), Gaps = 11/262 (4%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN 63
+T G G FG VY G+ VA+K + + + ++ E+ +L N
Sbjct: 26 ITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVN 81
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
++ + G ++ + + C +L + ++E + +Q + LH +
Sbjct: 82 ILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+KS NIFL E N++K+GDFG A + S + + G+ +MAPEV +
Sbjct: 141 IIHRDLKSNNIFL-HEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQD 198
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPESLSDEGQAF 242
+ D+++ G VL E+ +G+ P++ ++ QI+ VG G +P + + S+ +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 243 AEL---CLRHDPAQRATIFELL 261
L CL+ +R + +L
Sbjct: 259 KRLMAECLKKKRDERPSFPRIL 280
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NIFL E N++K+GDFG A + S + + G+ +MAPEV + + D
Sbjct: 150 NIFL-HEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 370 IWSLGCVLVEMSSGKTNLSGV 390
+++ G VL E+ +G+ S +
Sbjct: 208 VYAFGIVLYELMTGQLPYSNI 228
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV--NNETGEL-VAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + + E L VA+K + + R + L E + + ++VK
Sbjct: 24 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 81
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 82 IGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 140
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ L + + +KLGDFG + + T G + + +MAPE N
Sbjct: 141 DIAARNV-LVSSNDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIK-WMAPE---SINFRRF 194
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 195 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 253
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 254 WAYDPSRRPRFTEL 267
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV--NNETGEL-VAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + + E L VA+K + + R + L E + + ++VK
Sbjct: 19 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 76
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 77 IGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ L + + +KLGDFG + + T G + + +MAPE N
Sbjct: 136 DIAARNV-LVSSNDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIK-WMAPE---SINFRRF 189
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 248
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 249 WAYDPSRRPRFTEL 262
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 131/303 (43%), Gaps = 47/303 (15%)
Query: 11 GQGRFGKV--------YTAVNNETGELVAMKEIQLHKQNDARFVK----DMLVELRILEG 58
QG+F K+ + A+ L+ K ND +K D EL+I+
Sbjct: 40 NQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITD 99
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLES-------LVQSTEDGLPEVLVRRYTKQ 111
I + + G+ + +E+ + E ++ L ++ +P +++ K
Sbjct: 100 IKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKS 159
Query: 112 LVDAISALH-ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGT 170
++++ S +H E I HRD+K +NI + G +KL DFG + V ++ G GT
Sbjct: 160 VLNSFSYIHNEKNICHRDVKPSNILMDKNG-RVKLSDFGES-----EYMVDKKIKGSRGT 213
Query: 171 QAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWA-----------------EY 213
+M PE F + + G VDIWSLG L M P++ EY
Sbjct: 214 YEFMPPEFFSNESSYN-GAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEY 272
Query: 214 --DSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCE 271
D N+ ++ + ++ LS+E F +L LR +PA+R T + L+H +L +
Sbjct: 273 PLDRNH-FLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI 331
Query: 272 EDV 274
ED+
Sbjct: 332 EDL 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + G +KL DFG + V ++ G GT +M PE F + + G V
Sbjct: 181 SNILMDKNG-RVKLSDFGES-----EYMVDKKIKGSRGTYEFMPPEFFSNESSYN-GAKV 233
Query: 369 DIWSLGCVLVEMSSGKTNLSGVVVSAEVFGS 399
DIWSLG L M S + E+F +
Sbjct: 234 DIWSLGICLYVMFYNVVPFSLKISLVELFNN 264
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + +++ + D D L+E I+ N +N+
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL---DFLMEALIISKFNHQNI 110
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 229
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 230 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 282
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 283 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 320
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV---NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + VA+K + + R + L E + + ++VK
Sbjct: 19 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 76
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 77 IGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ ++A + +KLGDFG + + T G + + +MAPE N
Sbjct: 136 DIAARNVLVSA-TDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIK-WMAPE---SINFRRF 189
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 248
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 249 WAYDPSRRPRFTEL 262
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV--NNETGEL-VAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + + E L VA+K + + R + L E + + ++VK
Sbjct: 22 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 79
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 80 IGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 138
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ L + + +KLGDFG + + T G + + +MAPE N
Sbjct: 139 DIAARNV-LVSSNDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIK-WMAPE---SINFRRF 192
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 193 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 251
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 252 WAYDPSRRPRFTEL 265
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV---NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + VA+K + + R + L E + + ++VK
Sbjct: 19 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 76
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 77 IGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ L + + +KLGDFG + + T G + + +MAPE N
Sbjct: 136 DIAARNV-LVSSNDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIK-WMAPE---SINFRRF 189
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 248
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 249 WAYDPSRRPRFTEL 262
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV--NNETGEL-VAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + + E L VA+K + + R + L E + + ++VK
Sbjct: 16 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 73
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 74 IGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 132
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ L + + +KLGDFG + + T G + + +MAPE N
Sbjct: 133 DIAARNV-LVSSNDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIK-WMAPE---SINFRRF 186
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 245
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 246 WAYDPSRRPRFTEL 259
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV---NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + VA+K + + R + L E + + ++VK
Sbjct: 19 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 76
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 77 IGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ L + + +KLGDFG + + T G + + +MAPE N
Sbjct: 136 DIAARNV-LVSSNDCVKLGDFGLSRYMEDSTXXKAS-KGKLPIK-WMAPE---SINFRRF 189
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 248
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 249 WAYDPSRRPRFTEL 262
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV--NNETGEL-VAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + + E L VA+K + + R + L E + + ++VK
Sbjct: 21 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 78
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 79 IGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 137
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ L + + +KLGDFG + + T G + + +MAPE N
Sbjct: 138 DIAARNV-LVSSNDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIK-WMAPE---SINFRRF 191
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 192 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 250
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 251 WAYDPSRRPRFTEL 264
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 24/272 (8%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKE----IQLHKQNDARFVKDMLVELRILEG 58
+ F+ S GQG F K++ V E G+ + E +++ + + + ++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISA 118
++ K+LV YGV + +E +L E G+L++ ++ ++ + + KQL A+
Sbjct: 69 LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHF 128
Query: 119 LHENTIVHRDIKSANIFLTAE-----GNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQ 171
L ENT++H ++ + NI L E GN +KL D G ++ T +P ++
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI-----TVLPKDI--LQERI 181
Query: 172 AYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPT 230
++ PE N A D WS G L E+ S G +P + DS ++ F +
Sbjct: 182 PWVPPECI--ENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF---YEDRHQ 236
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+P + E C+ ++P R + +++
Sbjct: 237 LPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 120/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 95
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + MEL G L+S ++ T L + + + +
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 156 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 214
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 215 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 267
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 268 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 305
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 110/207 (53%), Gaps = 18/207 (8%)
Query: 7 SVSP-GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
++SP G G +G V ++ + ++G +A+K++ Q+ K ELR+L+ + +N++
Sbjct: 55 TLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIH-AKRTYRELRLLKHMKHENVI 113
Query: 66 KYYGVEIHREEMVLFME--LCTE---GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
V + F + L T L ++V+ + L + V+ Q++ + +H
Sbjct: 114 GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH 171
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
I+HRD+K +N+ + E LK+ DFG ++ HT E+ G+V T+ Y APE+ +
Sbjct: 172 SADIIHRDLKPSNLAVN-EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML 224
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGK 207
N + + VDIWS+GC++ E+ +G+
Sbjct: 225 --NWMHYNMTVDIWSVGCIMAELLTGR 249
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 316 EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGC 375
E LK+ DFG ++ HT E+ G+V T+ Y APE+ + N + + VDIWS+GC
Sbjct: 189 EDCELKILDFG----LARHTD--DEMTGYVATRWYRAPEIML--NWMHYNMTVDIWSVGC 240
Query: 376 VLVEMSSGKTNLSGV 390
++ E+ +G+T G
Sbjct: 241 IMAELLTGRTLFPGT 255
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 120/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 110
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + MEL G L+S ++ T L + + + +
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 229
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 230 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 282
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 283 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 320
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ I +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKIRHE 73
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 74 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 129
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 130 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 180
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 239
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 240 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 266
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + +E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 74 KLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 129
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 130 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 180
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 239
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 240 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 266
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 133/266 (50%), Gaps = 18/266 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +G+V + T A+K I+ + + K +L E+ +L+ ++ N++K Y
Sbjct: 46 GSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLDHPNIMKLYDF 104
Query: 71 EIHREEMVLFMELCTEGTL-ESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ L ME G L + ++ + EV KQ++ ++ LH++ IVHRD+
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQVLSGVTYLHKHNIVHRDL 162
Query: 130 KSANIFL-TAEGNSL-KLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
K N+ L + E ++L K+ DFG +SA ++ +GT Y+APEV + +
Sbjct: 163 KPENLLLESKEKDALIKIVDFG----LSAVFENQKKMKERLGTAYYIAPEVL----RKKY 214
Query: 188 GRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGE-TPTIPE--SLSDEGQAFAE 244
D+WS+G +L + +G P+ ++ +I+ KV G+ T PE ++S+ + +
Sbjct: 215 DEKCDVWSIGVILFILLAGYPPFGG-QTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK 273
Query: 245 LCLRHDPAQRATIFELLQHPFLIVSC 270
L+ D +R + + L+HP++ C
Sbjct: 274 QMLQFDSQRRISAQQALEHPWIKEMC 299
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+K+ DFG +SA ++ +GT Y+APEV + + D+WS+G +L
Sbjct: 178 IKIVDFG----LSAVFENQKKMKERLGTAYYIAPEVL----RKKYDEKCDVWSIGVILFI 229
Query: 380 MSSG 383
+ +G
Sbjct: 230 LLAG 233
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 22/168 (13%)
Query: 112 LVDAISALHENTIVHRDIKSANIFLTAE-GN--SLKLGDFGSAVKISAHTTVPGELNGFV 168
+ + LH +VHRD+K +NI E GN S+++ DFG A ++ A NG +
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE-------NGLL 177
Query: 169 GTQAY----MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFK 222
T Y +APEV + G+ A DIWSLG +L +G P+A D+ +I+ +
Sbjct: 178 XTPCYTANFVAPEVL---ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILAR 234
Query: 223 VGMGE---TPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
+G G+ + S+SD + L DP QR T +L+HP+++
Sbjct: 235 IGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIV 282
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 27/113 (23%)
Query: 311 IFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAY----MAPEVFMDTNKVGH 364
+++ GN S+++ DFG A ++ A NG + T Y +APEV + G+
Sbjct: 148 LYVDESGNPESIRICDFGFAKQLRAE-------NGLLXTPCYTANFVAPEVL---ERQGY 197
Query: 365 GRAVDIWSLGCVLVEMSSGKTNLS-----------GVVVSAEVFGSGGWWFQV 406
A DIWSLG +L +G T + + S + SGG+W V
Sbjct: 198 DAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 71 GLGINGKVLQIFNKRTQEKFALKXLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 126
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ E G L S +Q D E K + +AI LH I HRD
Sbjct: 127 LYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRD 186
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A + ++H + L T Y+APEV
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVLGPEK--- 239
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D WSLG + + G P + SN+ + + G E P PE +S
Sbjct: 240 YDKSCDXWSLGVIXYILLCGYPP---FYSNHGLAISPGXKTRIRXGQYEFPN-PEWSEVS 295
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E HP++ S
Sbjct: 296 EEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS 328
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCV 376
LKL DFG A + ++H + L T Y+APEV + ++ D WSLG +
Sbjct: 203 LKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVLGPEK---YDKSCDXWSLGVI 252
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 24/165 (14%)
Query: 115 AISALHENTIVHRDIKSANIFLTAE-GN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQ 171
+ LH +VHRD+K +NI E GN L++ DFG A ++ A NG + T
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE-------NGLLMTP 185
Query: 172 AY----MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGM 225
Y +APEV + G+ DIWSLG +L M +G P+A D+ +I+ ++G
Sbjct: 186 CYTANFVAPEVL---KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
Query: 226 GETPTIP----ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
G+ T+ ++S+ + L DP QR T ++LQHP++
Sbjct: 243 GKF-TLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 16/81 (19%)
Query: 311 IFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAY----MAPEVFMDTNKVGH 364
+++ GN L++ DFG A ++ A NG + T Y +APEV + G+
Sbjct: 153 LYVDESGNPECLRICDFGFAKQLRAE-------NGLLMTPCYTANFVAPEVL---KRQGY 202
Query: 365 GRAVDIWSLGCVLVEMSSGKT 385
DIWSLG +L M +G T
Sbjct: 203 DEGCDIWSLGILLYTMLAGYT 223
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 63/306 (20%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + G VA+K++ QN K EL +L+ +N KN++ V
Sbjct: 31 GSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH-AKRAYRELVLLKCVNHKNIISLLNV 89
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q L + Q++ I LH I+HRD
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 149
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A S + + +V T+ Y APEV + +G+
Sbjct: 150 LKPSNIVVKSDC-TLKILDFGLARTASTNFM----MTPYVVTRYYRAPEVILG---MGYK 201
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFKVGMGET 228
VDIWS+GC++ E+ G P AE+ + Q + +
Sbjct: 202 ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 261
Query: 229 PTIPESLSDEGQAFAEL--------------------------CLRHDPAQRATIFELLQ 262
P P G AF EL L DP +R ++ E L+
Sbjct: 262 PAYP------GIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALR 315
Query: 263 HPFLIV 268
HP++ V
Sbjct: 316 HPYITV 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A S + + +V T+ Y APEV + +G+ V
Sbjct: 153 SNIVVKSDC-TLKILDFGLARTASTNFM----MTPYVVTRYYRAPEVILG---MGYKENV 204
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ E+ G G
Sbjct: 205 DIWSVGCIMGELVKGSVIFQG 225
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 31 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 87
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 148 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 206
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 207 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 259
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 260 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 297
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 24/165 (14%)
Query: 115 AISALHENTIVHRDIKSANIFLTAE-GN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQ 171
+ LH +VHRD+K +NI E GN L++ DFG A ++ A NG + T
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE-------NGLLMTP 185
Query: 172 AY----MAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAE--YDSNYQIMFKVGM 225
Y +APEV + G+ DIWSLG +L M +G P+A D+ +I+ ++G
Sbjct: 186 CYTANFVAPEVL---KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
Query: 226 GETPTIP----ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
G+ T+ ++S+ + L DP QR T ++LQHP++
Sbjct: 243 GKF-TLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 16/81 (19%)
Query: 311 IFLTAEGN--SLKLGDFGSAVKISAHTTVPGELNGFVGTQAY----MAPEVFMDTNKVGH 364
+++ GN L++ DFG A ++ A NG + T Y +APEV + G+
Sbjct: 153 LYVDESGNPECLRICDFGFAKQLRAE-------NGLLMTPCYTANFVAPEVL---KRQGY 202
Query: 365 GRAVDIWSLGCVLVEMSSGKT 385
DIWSLG +L M +G T
Sbjct: 203 DEGCDIWSLGILLYTMLAGYT 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ +N +N+
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKLNHQNI 110
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 229
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 230 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 282
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 283 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 320
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +++ E+ IL + N++
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V +R ++VL +EL + G L + E L E + KQ++D ++ LH I H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L + +KL DFG A +I E GT ++APE+ N
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNY 192
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE---SLSDEGQA 241
G D+WS+G + + SG P+ D+ + + + E S+ +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L + +R TI E L+HP++
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+KL DFG A +I E GT ++APE+ N G D+WS+G +
Sbjct: 158 IKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 210
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 211 LLSGASPFLG 220
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 121/281 (43%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ +N +N+
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKLNHQNI 96
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 119 LHENTIVHRDIKSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 215
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 216 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 268
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 269 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 306
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 62
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 63 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 118
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 119 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 169
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 170 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 228
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 229 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 255
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 74 KLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 129
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 130 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 180
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 239
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 240 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 266
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +++ E+ IL + N++
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V +R ++VL +EL + G L + E L E + KQ++D ++ LH I H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L + +KL DFG A +I E GT ++APE+ N
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNY 192
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESL---SDEGQA 241
G D+WS+G + + SG P+ D+ + + + E S+ +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L + +R TI E L+HP++
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+KL DFG A +I E GT ++APE+ N G D+WS+G +
Sbjct: 158 IKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 210
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 211 LLSGASPFLG 220
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 18/261 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG V+ V + + K +++ K D VK E+ IL +N++ +
Sbjct: 14 GRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKK---EISILNIARHRNILHLHES 69
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
EE+V+ E + + + ++ L E + Y Q+ +A+ LH + I H DI+
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIR 129
Query: 131 SAN-IFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQ-AYMAPEVFMDTNKVGHG 188
N I+ T +++K+ +FG A ++ PG+ + T Y APEV
Sbjct: 130 PENIIYQTRRSSTIKIIEFGQARQLK-----PGDNFRLLFTAPEYYAPEVHQHDVV---S 181
Query: 189 RAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPES---LSDEGQAFAEL 245
A D+WSLG ++ + SG P+ ++N QI+ + E E+ +S E F +
Sbjct: 182 TATDMWSLGTLVYVLLSGINPFLA-ETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
Query: 246 CLRHDPAQRATIFELLQHPFL 266
L + R T E LQHP+L
Sbjct: 241 LLVKERKSRMTASEALQHPWL 261
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 311 IFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQ-AYMAPEVFMDTNKVGHGRAVD 369
I+ T +++K+ +FG A ++ PG+ + T Y APEV A D
Sbjct: 134 IYQTRRSSTIKIIEFGQARQLK-----PGDNFRLLFTAPEYYAPEVHQHDVV---STATD 185
Query: 370 IWSLGCVLVEMSSG 383
+WSLG ++ + SG
Sbjct: 186 MWSLGTLVYVLLSG 199
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 19/256 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + + VA+K ++ + V+ L E +++ + LV+ Y V
Sbjct: 22 GAGQFGEVWMGYYNNSTK-VAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDG---LPEVLVRRYTKQLVDAISALHENTIVHR 127
E + + E +G+L ++S E G LP+++ ++ Q+ + ++ + +HR
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLI--DFSAQIAEGMAYIERKNYIHR 134
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+++AN+ L +E K+ DFG A I + E F + APE N
Sbjct: 135 DLRAANV-LVSESLMCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAI---NFGCF 188
Query: 188 GRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
D+WS G +L E+ + GK P+ +N +M + G E+ DE ++C
Sbjct: 189 TIKSDVWSFGILLYEIVTYGKIPYPG-RTNADVMTALSQGYRMPRVENCPDELYDIMKMC 247
Query: 247 LRHDPAQRATIFELLQ 262
+ +R T F+ LQ
Sbjct: 248 WKEKAEERPT-FDYLQ 262
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 10 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 64
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 65 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 120
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 121 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 171
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 230
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 231 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 257
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 74 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 129
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 130 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 180
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 239
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 240 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 266
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +++ E+ IL + N++
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V +R ++VL +EL + G L + E L E + KQ++D ++ LH I H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L + +KL DFG A +I E GT ++APE+ N
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNY 192
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE---SLSDEGQA 241
G D+WS+G + + SG P+ D+ + + + E S+ +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L + +R TI E L+HP++
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+KL DFG A +I E GT ++APE+ N G D+WS+G +
Sbjct: 158 IKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 210
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 211 LLSGASPFLG 220
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +++ E+ IL + N++
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V +R ++VL +EL + G L + E L E + KQ++D ++ LH I H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L + +KL DFG A +I E GT ++APE+ N
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNY 192
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESL---SDEGQA 241
G D+WS+G + + SG P+ D+ + + + E S+ +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L + +R TI E L+HP++
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+KL DFG A +I E GT ++APE+ N G D+WS+G +
Sbjct: 158 IKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 210
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 211 LLSGASPFLG 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 34/276 (12%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FGKV Y + TGE VA+K L ++ + D+ E+ IL + +N+VK
Sbjct: 30 GEGHFGKVELCRYDPEGDNTGEQVAVK--SLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 67 YYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y G+ E + L ME G+L+ + ++ + +Y Q+ + L
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY 147
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
VHRD+ + N+ + +E + +K+GDFG I + + APE M +
Sbjct: 148 VHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK- 205
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP--------------- 229
A D+WS G L E+ + + + DS+ +F +G T
Sbjct: 206 --FYIASDVWSFGVTLHELLT----YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259
Query: 230 ---TIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
P + DE C P+ R + L++
Sbjct: 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 34/276 (12%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FGKV Y + TGE VA+K L ++ + D+ E+ IL + +N+VK
Sbjct: 18 GEGHFGKVELCRYDPEGDNTGEQVAVK--SLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 67 YYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y G+ E + L ME G+L+ + ++ + +Y Q+ + L
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY 135
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
VHRD+ + N+ + +E + +K+GDFG I + + APE M +
Sbjct: 136 VHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK- 193
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETP--------------- 229
A D+WS G L E+ + + + DS+ +F +G T
Sbjct: 194 --FYIASDVWSFGVTLHELLT----YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 247
Query: 230 ---TIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
P + DE C P+ R + L++
Sbjct: 248 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDAR---FVKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +++ E+ IL + N++
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITL 80
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V +R ++VL +EL + G L + E L E + KQ++D ++ LH I H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L + +KL DFG A +I E GT ++APE+ N
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNY 192
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE---SLSDEGQA 241
G D+WS+G + + SG P+ D+ + + + E S+ +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L + +R TI E L+HP++
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+KL DFG A +I E GT ++APE+ N G D+WS+G +
Sbjct: 158 IKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 210
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 211 LLSGASPFLG 220
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 96
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 119 LHENTIVHRDIKSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 215
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 216 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 268
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 269 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 306
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 95
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 156 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 214
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 215 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 267
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 268 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 305
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 126/256 (49%), Gaps = 20/256 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ A N+ + VA+K ++ + V+ L E +++ + LVK + V
Sbjct: 24 GAGQFGEVWMATYNKHTK-VAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTE---DGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ +E + + E +G+L ++S E LP+++ ++ Q+ + ++ + + +HR
Sbjct: 79 -VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI--DFSAQIAEGMAFIEQRNYIHR 135
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+++ANI ++A K+ DFG A I + E F + APE N
Sbjct: 136 DLRAANILVSA-SLVCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAI---NFGSF 189
Query: 188 GRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
D+WS G +L+E+ + G+ P+ SN +++ + G PE+ +E C
Sbjct: 190 TIKSDVWSFGILLMEIVTYGRIPYPGM-SNPEVIRALERGYRMPRPENCPEELYNIMMRC 248
Query: 247 LRHDPAQRATIFELLQ 262
++ P +R T FE +Q
Sbjct: 249 WKNRPEERPT-FEYIQ 263
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 96
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 119 LHENTIVHRDIKSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK-WMPP 215
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 216 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 268
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 269 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 306
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 18/265 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARF---VKDMLVELRILEGINQKNLVKY 67
G G+F V TG A K I+ + +R +++ E+ IL + N++
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ V +R ++VL +EL + G L + E L E + KQ++D ++ LH I H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 128 DIKSANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNK 184
D+K NI L + +KL DFG A +I E GT ++APE+ N
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNY 192
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESL---SDEGQA 241
G D+WS+G + + SG P+ D+ + + + E S+ +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 242 FAELCLRHDPAQRATIFELLQHPFL 266
F L + +R TI E L+HP++
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 320 LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE 379
+KL DFG A +I E GT ++APE+ N G D+WS+G +
Sbjct: 158 IKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEI---VNYEPLGLEADMWSIGVITYI 210
Query: 380 MSSGKTNLSG 389
+ SG + G
Sbjct: 211 LLSGASPFLG 220
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G L ++ E G LP+++ Q+ ++
Sbjct: 74 KLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 129
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 130 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 180
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 239
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 240 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 266
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 45/223 (20%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY--- 67
G G FG+V+ A + G+ ++ ++ + + R E++ L ++ N+V Y
Sbjct: 21 GSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER-------EVKALAKLDHVNIVHYNGC 73
Query: 68 -----YGVEIHREEM-------------------VLF--MELCTEGTLESLVQSTE-DGL 100
Y E + + LF ME C +GTLE ++ + L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
+VL +Q+ + +H ++HRD+K +NIFL + +K+GDFG +
Sbjct: 134 DKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKN---- 188
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM 203
G+ GT YM+PE + +G+ VD+++LG +L E+
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQD---YGKEVDLYALGLILAEL 228
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NIFL + +K+GDFG + G+ GT YM+PE + +G+ V
Sbjct: 165 SNIFL-VDTKQVKIGDFGLVTSLKN----DGKRTRSKGTLRYMSPEQISSQD---YGKEV 216
Query: 369 DIWSLGCVLVEM 380
D+++LG +L E+
Sbjct: 217 DLYALGLILAEL 228
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 24/272 (8%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKE----IQLHKQNDARFVKDMLVELRILEG 58
+ F+ S GQG F K++ V E G+ + E +++ + + + ++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 59 INQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISA 118
++ K+LV YGV +E +L E G+L++ ++ ++ + + KQL A+
Sbjct: 69 LSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHF 128
Query: 119 LHENTIVHRDIKSANIFLTAE-----GNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQ 171
L ENT++H ++ + NI L E GN +KL D G ++ T +P ++
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI-----TVLPKDI--LQERI 181
Query: 172 AYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPT 230
++ PE N A D WS G L E+ S G +P + DS ++ F +
Sbjct: 182 PWVPPECI--ENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF---YEDRHQ 236
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+P + E C+ ++P R + +++
Sbjct: 237 LPAPKAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 46 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 102
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 119 LHENTIVHRDIKSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 163 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 221
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 222 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 274
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 275 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 312
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV---NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + VA+K + + R + L E + + ++VK
Sbjct: 399 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 456
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 457 IGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 515
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ ++A + +KLGDFG + + T G + + +MAPE N
Sbjct: 516 DIAARNVLVSA-TDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIK-WMAPE---SINFRRF 569
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 628
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 629 WAYDPSRRPRFTEL 642
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 126/256 (49%), Gaps = 20/256 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ A N+ + VA+K ++ + V+ L E +++ + LVK + V
Sbjct: 197 GAGQFGEVWMATYNKHTK-VAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTE---DGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ +E + + E +G+L ++S E LP+++ ++ Q+ + ++ + + +HR
Sbjct: 252 -VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI--DFSAQIAEGMAFIEQRNYIHR 308
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+++ANI ++A K+ DFG A I + E F + APE N
Sbjct: 309 DLRAANILVSA-SLVCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAI---NFGSF 362
Query: 188 GRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
D+WS G +L+E+ + G+ P+ SN +++ + G PE+ +E C
Sbjct: 363 TIKSDVWSFGILLMEIVTYGRIPYPGM-SNPEVIRALERGYRMPRPENCPEELYNIMMRC 421
Query: 247 LRHDPAQRATIFELLQ 262
++ P +R T FE +Q
Sbjct: 422 WKNRPEERPT-FEYIQ 436
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 71 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 129
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 190 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 241
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 301
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 302 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 193 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 244
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 245 DIWSVGCIMGEMVRHKILFPG 265
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 56 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 112
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 119 LHENTIVHRDIKSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 173 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 231
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 232 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 284
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 285 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 322
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + +E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 74 KLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 129
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N Q P
Sbjct: 130 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEXTARQGAKFPIK 180
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 239
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 240 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 266
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 14/254 (5%)
Query: 11 GQGRFGKVYTAV---NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G+G+FG V+ + VA+K + + R + L E + + ++VK
Sbjct: 399 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHIVKL 456
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV I + + MELCT G L S +Q + L + Y QL A++ L VHR
Sbjct: 457 IGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 515
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
DI + N+ L + + +KLGDFG + + T G + + +MAPE N
Sbjct: 516 DIAARNV-LVSSNDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIK-WMAPE---SINFRRF 569
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W G + E + G +P+ +N ++ ++ GE +P + + C
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKC 628
Query: 247 LRHDPAQRATIFEL 260
+DP++R EL
Sbjct: 629 WAYDPSRRPRFTEL 642
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 12 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 66
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 67 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLV--DMAAQIASGMAY 122
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 123 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 173
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 174 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 232
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R +P +R T FE LQ
Sbjct: 233 CPESLHD----LMCQCWRKEPEERPT-FEYLQ 259
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 70
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E +G+L ++ E G LP+++ + Q+ ++
Sbjct: 71 KLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKG-ETGKYLRLPQLV--DMSAQIASGMAY 126
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 127 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 177
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 236
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R +P +R T FE LQ
Sbjct: 237 CPESLHD----LMCQCWRKEPEERPT-FEYLQ 263
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 17/250 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK-----EIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G FG+VY +TG++ AMK I++ KQ + + + ++ + G +
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
Y +++ ++L G L + S E +R Y +++ + +H +V
Sbjct: 257 MSYAFHTP-DKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+RD+K ANI L G+ +++ D G A S + VGT YMAPEV V
Sbjct: 315 YRDLKPANILLDEHGH-VRISDLGLACDFSKKKP-----HASVGTHGYMAPEVL--QKGV 366
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDS-NYQIMFKVGMGETPTIPESLSDEGQAFAE 244
+ + D +SLGC+L ++ G P+ ++ + + + ++ + +P+S S E ++ E
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 245 LCLRHDPAQR 254
L+ D +R
Sbjct: 427 GLLQRDVNRR 436
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI L G+ +++ D G A S + VGT YMAPEV V + +
Sbjct: 321 ANILLDEHGH-VRISDLGLACDFSKKKP-----HASVGTHGYMAPEVL--QKGVAYDSSA 372
Query: 369 DIWSLGCVLVEMSSGKT 385
D +SLGC+L ++ G +
Sbjct: 373 DWFSLGCMLFKLLRGHS 389
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 134/329 (40%), Gaps = 92/329 (27%)
Query: 11 GQGRFGKVYTAVNNETG-ELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN------ 63
G+G FGKV ++++ G VA+K ++ N R+ + E+++LE +N +
Sbjct: 23 GEGAFGKVVECIDHKAGGRHVAVKIVK----NVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 64 ---LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVL--VRRYTKQLVDAIS 117
+++++ H + + EL T + + E+G LP L +R+ Q+ +++
Sbjct: 79 CVQMLEWFE---HHGHICIVFELLGLSTYDFI---KENGFLPFRLDHIRKMAYQICKSVN 132
Query: 118 ALHENTIVHRDIKSANIFL------------------TAEGNSLKLGDFGSAVKISAHTT 159
LH N + H D+K NI T +K+ DFGSA H +
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS 192
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQI 219
V T+ Y APEV + +G + D+WS+GC+L+E G + +DS +
Sbjct: 193 T------LVSTRHYRAPEVIL---ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 220 -MFKVGMGETPTIP-----------------ESLSDEGQAFAELC--------------- 246
M + +G P + S G+ + C
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 247 ---------LRHDPAQRATIFELLQHPFL 266
L +DPA+R T+ E L+HPF
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFF 332
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 319 SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLV 378
+K+ DFGSA H + V T+ Y APEV + +G + D+WS+GC+L+
Sbjct: 175 DIKVVDFGSATYDDEHHST------LVSTRHYRAPEVIL---ALGWSQPCDVWSIGCILI 225
Query: 379 EMSSGKT 385
E G T
Sbjct: 226 EYYLGFT 232
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 17/250 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK-----EIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G FG+VY +TG++ AMK I++ KQ + + + ++ + G +
Sbjct: 197 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
Y +++ ++L G L + S E +R Y +++ + +H +V
Sbjct: 256 MSYAFHTP-DKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 313
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+RD+K ANI L G+ +++ D G A S + VGT YMAPEV V
Sbjct: 314 YRDLKPANILLDEHGH-VRISDLGLACDFSKKKP-----HASVGTHGYMAPEVL--QKGV 365
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDS-NYQIMFKVGMGETPTIPESLSDEGQAFAE 244
+ + D +SLGC+L ++ G P+ ++ + + + ++ + +P+S S E ++ E
Sbjct: 366 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 425
Query: 245 LCLRHDPAQR 254
L+ D +R
Sbjct: 426 GLLQRDVNRR 435
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI L G+ +++ D G A S + VGT YMAPEV V + +
Sbjct: 320 ANILLDEHGH-VRISDLGLACDFSKKKP-----HASVGTHGYMAPEVL--QKGVAYDSSA 371
Query: 369 DIWSLGCVLVEMSSGKT 385
D +SLGC+L ++ G +
Sbjct: 372 DWFSLGCMLFKLLRGHS 388
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 74 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 129
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+ +ANI L E K+ DFG A I E N + Q P
Sbjct: 130 VERMNYVHRDLAAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 180
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 239
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 240 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 266
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 17/250 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK-----EIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G FG+VY +TG++ AMK I++ KQ + + + ++ + G +
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
Y +++ ++L G L + S E +R Y +++ + +H +V
Sbjct: 257 MSYAFHTP-DKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+RD+K ANI L G+ +++ D G A S + VGT YMAPEV V
Sbjct: 315 YRDLKPANILLDEHGH-VRISDLGLACDFSKKKP-----HASVGTHGYMAPEVL--QKGV 366
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDS-NYQIMFKVGMGETPTIPESLSDEGQAFAE 244
+ + D +SLGC+L ++ G P+ ++ + + + ++ + +P+S S E ++ E
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 245 LCLRHDPAQR 254
L+ D +R
Sbjct: 427 GLLQRDVNRR 436
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI L G+ +++ D G A S + VGT YMAPEV V + +
Sbjct: 321 ANILLDEHGH-VRISDLGLACDFSKKKP-----HASVGTHGYMAPEVL--QKGVAYDSSA 372
Query: 369 DIWSLGCVLVEMSSGKT 385
D +SLGC+L ++ G +
Sbjct: 373 DWFSLGCMLFKLLRGHS 389
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 17/250 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK-----EIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G FG+VY +TG++ AMK I++ KQ + + + ++ + G +
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-KQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
Y +++ ++L G L + S E +R Y +++ + +H +V
Sbjct: 257 MSYAFHTP-DKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKV 185
+RD+K ANI L G+ +++ D G A S + VGT YMAPEV V
Sbjct: 315 YRDLKPANILLDEHGH-VRISDLGLACDFSKKKP-----HASVGTHGYMAPEVL--QKGV 366
Query: 186 GHGRAVDIWSLGCVLVEMSSGKRPWAEYDS-NYQIMFKVGMGETPTIPESLSDEGQAFAE 244
+ + D +SLGC+L ++ G P+ ++ + + + ++ + +P+S S E ++ E
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 245 LCLRHDPAQR 254
L+ D +R
Sbjct: 427 GLLQRDVNRR 436
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI L G+ +++ D G A S + VGT YMAPEV V + +
Sbjct: 321 ANILLDEHGH-VRISDLGLACDFSKKKP-----HASVGTHGYMAPEVL--QKGVAYDSSA 372
Query: 369 DIWSLGCVLVEMSSGKT 385
D +SLGC+L ++ G +
Sbjct: 373 DWFSLGCMLFKLLRGHS 389
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 71 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 129
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 190 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 241
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 301
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 302 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 193 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 244
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 245 DIWSVGCIMGEMVRHKILFPG 265
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 66 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 122
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 119 LHENTIVHRDIKSANIFLTA--EGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + + +M P
Sbjct: 183 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WMPP 241
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 242 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 294
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 295 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 332
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 32 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 90
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 91 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 150
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 151 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 202
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 203 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 262
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 263 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 322
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 154 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 205
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 206 DIWSVGCIMGEMVRHKILFPG 226
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 26 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 84
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 144
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 145 LKPSNIVVKSDX-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 196
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 148 SNIVVKSDX-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 199
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 200 DIWSVGCIMGEMVRHKILFPG 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDX-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDX-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 207 DIWSVGCIMGEMVRHKILFPG 227
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 207 DIWSVGCIMGEMVRHKILFPG 227
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 35/211 (16%)
Query: 11 GQGRFGKVYTA-VNNET---GELVAMKEI---QLHKQNDARFVKDMLVELRILEGINQKN 63
G+G FG VY VNN T +L AM +I +L +Q D E++++ +N
Sbjct: 40 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ--------EIKVMAKCQHEN 91
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEV---LVRRYTKQLVDAISALH 120
LV+ G +++ L G+L + S DG P + + + + + I+ LH
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFG--SAVKISAHTTVPGELNGFVGTQAYMAPEV 178
EN +HRDIKSANI L E + K+ DFG A + A T + + VGT AYMAPE
Sbjct: 151 ENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRI---VGTTAYMAPEA 206
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSSG 206
G DI+S G VL+E+ +G
Sbjct: 207 L-------RGEITPKSDIYSFGVVLLEIITG 230
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 16/80 (20%)
Query: 309 ANIFLTAEGNSLKLGDFG--SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
ANI L E + K+ DFG A + A T + + VGT AYMAPE G
Sbjct: 162 ANILLD-EAFTAKISDFGLARASEKFAQTVMXSRI---VGTTAYMAPEAL-------RGE 210
Query: 367 AV---DIWSLGCVLVEMSSG 383
DI+S G VL+E+ +G
Sbjct: 211 ITPKSDIYSFGVVLLEIITG 230
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F L E ++++ + +
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAF----LQEAQVMKKLRHE 322
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 323 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLV--DMAAQIASGMAY 378
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 379 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 429
Query: 179 FMDTNKVGHGR---AVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 488
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R +P +R T FE LQ
Sbjct: 489 CPESLHD----LMCQCWRKEPEERPT-FEYLQ 515
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 34 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 92
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 153 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 204
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 264
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 265 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 324
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 156 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 207
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 208 DIWSVGCIMGEMVRHKILFPG 228
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKXVNHKNIISLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDX-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDX-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 207 DIWSVGCIMGEMVRHKILFPG 227
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 34 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 92
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 93 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 153 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 204
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 264
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 265 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 156 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 207
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 208 DIWSVGCIMGEMVRHKILFPG 228
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 239
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 240 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLV--DMAAQIASGMAY 295
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 296 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 346
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET----PT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 405
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R +P +R T FE LQ
Sbjct: 406 CPESLHD----LMCQCWRKEPEERPT-FEYLQ 432
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 207 DIWSVGCIMGEMVRHKILFPG 227
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 239
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 240 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG-ETGKYLRLPQLV--DMAAQIASGMAY 295
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 296 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 346
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET----PT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 405
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R +P +R T FE LQ
Sbjct: 406 CPESLHD----LMCQCWRKEPEERPT-FEYLQ 432
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 26 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 84
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 85 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 144
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 145 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 196
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 257 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 148 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 199
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 200 DIWSVGCIMGEMVRHKILFPG 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 27 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 85
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 145
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 146 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 197
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 257
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 258 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 317
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 149 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 200
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 201 DIWSVGCIMGEMVRHKILFPG 221
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 70
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E +G+L ++ E G LP+++ + Q+ ++
Sbjct: 71 KLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKG-ETGKYLRLPQLV--DMSAQIASGMAY 126
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 127 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEWTARQGAKFPIK 177
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 236
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R +P +R T FE LQ
Sbjct: 237 CPESLHD----LMCQCWRKEPEERPT-FEYLQ 263
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKXVNHKNIISLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDX-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDX-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 207 DIWSVGCIMGEMVRHKILFPG 227
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 19/256 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + + VA+K ++ + V+ L E +++ + LV+ Y V
Sbjct: 21 GAGQFGEVWMGYYNNSTK-VAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDG---LPEVLVRRYTKQLVDAISALHENTIVHR 127
E + + E +G+L ++S E G LP+++ ++ Q+ + ++ + +HR
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLI--DFSAQIAEGMAYIERKNYIHR 133
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+++AN+ L +E K+ DFG A I + E F + APE N
Sbjct: 134 DLRAANV-LVSESLMCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAI---NFGCF 187
Query: 188 GRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
++WS G +L E+ + GK P+ +N +M + G E+ DE ++C
Sbjct: 188 TIKSNVWSFGILLYEIVTYGKIPYPG-RTNADVMSALSQGYRMPRMENCPDELYDIMKMC 246
Query: 247 LRHDPAQRATIFELLQ 262
+ +R T F+ LQ
Sbjct: 247 WKEKAEERPT-FDYLQ 261
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 119/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 57 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 113
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + +M P
Sbjct: 174 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WMPP 232
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 233 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 285
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 286 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 323
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKXVNHKNIISLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDX-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 264 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDX-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 207 DIWSVGCIMGEMVRHKILFPG 227
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 27 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIISLLNV 85
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q + L + Q++ I LH I+HRD
Sbjct: 86 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 145
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 146 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 197
Query: 189 RAVDIWSLGCVLVEMSSGK--------------------RPWAEYDSNYQIMFK------ 222
VDIWS+GC++ EM K P E+ Q +
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 257
Query: 223 ---VGMGETPTIPESL-----------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
G+ P+SL + + + L DPA+R ++ + LQHP++ V
Sbjct: 258 PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 317
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 149 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 200
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 201 DIWSVGCIMGEMVRHKILFPG 221
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 119/281 (42%), Gaps = 32/281 (11%)
Query: 11 GQGRFGKVY----TAVNNETGEL-VAMKEI-QLHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG+VY + + N+ L VA+K + ++ + D D L+E I+ N +N+
Sbjct: 80 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL---DFLMEALIISKFNHQNI 136
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE------DGLPEVLVRRYTKQLVDAISA 118
V+ GV + + +EL G L+S ++ T L + + + +
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 119 LHENTIVHRDIKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
L EN +HRDI + N LT G K+GDFG A I + + +M P
Sbjct: 197 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WMPP 255
Query: 177 EVFMD---TNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIP 232
E FM+ T+K D WS G +L E+ S G P+ SN +++ V G P
Sbjct: 256 EAFMEGIFTSK------TDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFVTSGGRMDPP 308
Query: 233 ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
++ C +H P R +L+ I C +D
Sbjct: 309 KNCPGPVYRIMTQCWQHQPEDRPNFAIILER---IEYCTQD 346
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFLQ----EAQVMKKLRHE 240
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 241 KLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKG-EMGKYLRLPQLV--DMAAQIASGMAY 296
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG I E N + Q P
Sbjct: 297 VERMNYVHRDLRAANI-LVGENLVCKVADFGLGRLI--------EDNEYTARQGAKFPIK 347
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET----PT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 348 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 406
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R DP +R T FE LQ
Sbjct: 407 CPESLHD----LMCQCWRKDPEERPT-FEYLQ 433
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 35/211 (16%)
Query: 11 GQGRFGKVYTA-VNNET---GELVAMKEI---QLHKQNDARFVKDMLVELRILEGINQKN 63
G+G FG VY VNN T +L AM +I +L +Q D E++++ +N
Sbjct: 40 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ--------EIKVMAKCQHEN 91
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEV---LVRRYTKQLVDAISALH 120
LV+ G +++ L G+L + S DG P + + + + + I+ LH
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFG--SAVKISAHTTVPGELNGFVGTQAYMAPEV 178
EN +HRDIKSANI L E + K+ DFG A + A T + + VGT AYMAPE
Sbjct: 151 ENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRI---VGTTAYMAPEA 206
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSSG 206
G DI+S G VL+E+ +G
Sbjct: 207 L-------RGEITPKSDIYSFGVVLLEIITG 230
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 16/80 (20%)
Query: 309 ANIFLTAEGNSLKLGDFG--SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
ANI L E + K+ DFG A + A T + + VGT AYMAPE G
Sbjct: 162 ANILLD-EAFTAKISDFGLARASEKFAQTVMXXRI---VGTTAYMAPEAL-------RGE 210
Query: 367 AV---DIWSLGCVLVEMSSG 383
DI+S G VL+E+ +G
Sbjct: 211 ITPKSDIYSFGVVLLEIITG 230
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 51/300 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + G VA+K++ QN K EL +L+ +N KN++ V
Sbjct: 33 GSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH-AKRAYRELVLLKCVNHKNIISLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + L E +L Q L + Q++ I LH I+HRD
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A + + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDC-TLKILDFGLARTACTNFM----MTPYVVTRYYRAPEVILG---MGYA 203
Query: 189 RAVDIWSLGCVLVEMSSG--------------------KRPWAEYDSNYQIMFKVGMGET 228
VDIWS+GC++ E+ G P AE+ + Q + +
Sbjct: 204 ANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 263
Query: 229 PTIP---------------ESLSD-----EGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
P P ES D + + L DP +R ++ E L+HP++ V
Sbjct: 264 PKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 323
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A + + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDC-TLKILDFGLARTACTNFM----MTPYVVTRYYRAPEVILG---MGYAANV 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ E+ G G
Sbjct: 207 DIWSVGCIMGELVKGCVIFQG 227
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 13/256 (5%)
Query: 1 MSSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGIN 60
++ F + G+G FGKV + T EL A+K ++ V+ +VE R+L
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 61 QKN-LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL 119
+ L + + + + ME G L +Q E Y ++ + L
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFL 137
Query: 120 HENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEV 178
I++RD+K N+ L +EG+ +K+ DFG + I T F GT Y+APE+
Sbjct: 138 QSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTT----KXFCGTPDYIAPEI 192
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE 238
+G++VD W+ G +L EM +G+ P+ D + +F+ M P+S+S E
Sbjct: 193 IAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LFQSIMEHNVAYPKSMSKE 247
Query: 239 GQAFAELCLRHDPAQR 254
A + + P +R
Sbjct: 248 AVAICKGLMTKHPGKR 263
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +EG+ +K+ DFG + I T F GT Y+APE+ +G++V
Sbjct: 151 NVMLDSEGH-IKIADFGMCKENIWDGVTT----KXFCGTPDYIAPEIIAYQ---PYGKSV 202
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D W+ G +L EM +G+ G
Sbjct: 203 DWWAFGVLLYEMLAGQAPFEG 223
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 14/268 (5%)
Query: 11 GQGRFGKVYTAV-NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYG 69
G+G FG+VY V N GE + + K + + E I++ ++ ++VK G
Sbjct: 33 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 92
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ I E + MEL G L ++ ++ L + + Y+ Q+ A++ L VHRDI
Sbjct: 93 I-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDI 151
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
NI L A +KLGDFG + I + +M+PE N
Sbjct: 152 AVRNI-LVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPE---SINFRRFTT 205
Query: 190 AVDIWSLGCVLVE-MSSGKRP--WAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W + E +S GK+P W E N ++ + G+ P+ C
Sbjct: 206 ASDVWMFAVCMWEILSFGKQPFFWLE---NKDVIGVLEKGDRLPKPDLCPPVLYTLMTRC 262
Query: 247 LRHDPAQRATIFELLQHPFLIVSCEEDV 274
+DP+ R EL+ + E+D+
Sbjct: 263 WDYDPSDRPRFTELVCSLSDVYQMEKDI 290
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 13 GRFGKVYTAVNNETGELVAMKEI--------QLHKQNDARFVKDMLVELRILEGINQKNL 64
G +G V V++E G VA+K + ++ +D+ K +L E+R+L + N+
Sbjct: 33 GSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91
Query: 65 VKYYGVEIHREEMVLF-MELCTEGTLESLVQSTEDG---LPEVLVRRYTKQLVDAISALH 120
+ + +H EE + + L TE L Q D + ++ + ++ + LH
Sbjct: 92 LGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH 151
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
E +VHRD+ NI L A+ N + + DF ++ T +V + Y APE+ M
Sbjct: 152 EAGVVHRDLHPGNILL-ADNNDITICDFN----LAREDTADANKTHYVTHRWYRAPELVM 206
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGK 207
G + VD+WS GCV+ EM + K
Sbjct: 207 QFK--GFTKLVDMWSAGCVMAEMFNRK 231
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 313 LTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWS 372
L A+ N + + DF ++ T +V + Y APE+ M G + VD+WS
Sbjct: 166 LLADNNDITICDFN----LAREDTADANKTHYVTHRWYRAPELVMQFK--GFTKLVDMWS 219
Query: 373 LGCVLVEMSSGKTNLSG 389
GCV+ EM + K G
Sbjct: 220 AGCVMAEMFNRKALFRG 236
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEI--------QLHKQNDARFVKDMLVELRILEGINQK 62
G +G V V++E G VA+K + ++ +D+ K +L E+R+L +
Sbjct: 31 SSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 63 NLVKYYGVEIHREEMVLF-MELCTEGTLESLVQSTEDG---LPEVLVRRYTKQLVDAISA 118
N++ + +H EE + + L TE L Q D + ++ + ++ +
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
LHE +VHRD+ NI L A+ N + + DF ++ T +V + Y APE+
Sbjct: 150 LHEAGVVHRDLHPGNILL-ADNNDITICDFN----LAREDTADANKTHYVTHRWYRAPEL 204
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSSGK 207
M G + VD+WS GCV+ EM + K
Sbjct: 205 VMQFK--GFTKLVDMWSAGCVMAEMFNRK 231
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 313 LTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWS 372
L A+ N + + DF ++ T +V + Y APE+ M G + VD+WS
Sbjct: 166 LLADNNDITICDFN----LAREDTADANKTHYVTHRWYRAPELVMQFK--GFTKLVDMWS 219
Query: 373 LGCVLVEMSSGKTNLSG 389
GCV+ EM + K G
Sbjct: 220 AGCVMAEMFNRKALFRG 236
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 239
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 240 KLVQLYAV-VSEEPIYIVGEYMSKGSLLDFLKG-ETGKYLRLPQLV--DMAAQIASGMAY 295
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N + Q P
Sbjct: 296 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEYTARQGAKFPIK 346
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET----PT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 405
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R +P +R T FE LQ
Sbjct: 406 CPESLHD----LMCQCWRKEPEERPT-FEYLQ 432
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 99/209 (47%), Gaps = 31/209 (14%)
Query: 11 GQGRFGKVYTA-VNNET---GELVAMKEI---QLHKQNDARFVKDMLVELRILEGINQKN 63
G+G FG VY VNN T +L AM +I +L +Q D E++++ +N
Sbjct: 34 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ--------EIKVMAKCQHEN 85
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEV---LVRRYTKQLVDAISALH 120
LV+ G +++ L G+L + S DG P + + + + + I+ LH
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
EN +HRDIKSANI L E + K+ DFG A + S VGT AYMAPE
Sbjct: 145 ENHHIHRDIKSANILLD-EAFTAKISDFGLA-RASEKFAQXVMXXRIVGTTAYMAPEAL- 201
Query: 181 DTNKVGHGRAV---DIWSLGCVLVEMSSG 206
G DI+S G VL+E+ +G
Sbjct: 202 ------RGEITPKSDIYSFGVVLLEIITG 224
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI L E + K+ DFG A + S VGT AYMAPE G
Sbjct: 156 ANILLD-EAFTAKISDFGLA-RASEKFAQXVMXXRIVGTTAYMAPEAL-------RGEIT 206
Query: 369 ---DIWSLGCVLVEMSSG 383
DI+S G VL+E+ +G
Sbjct: 207 PKSDIYSFGVVLLEIITG 224
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 14/268 (5%)
Query: 11 GQGRFGKVYTAV-NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYG 69
G+G FG+VY V N GE + + K + + E I++ ++ ++VK G
Sbjct: 21 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 80
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ I E + MEL G L ++ ++ L + + Y+ Q+ A++ L VHRDI
Sbjct: 81 I-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDI 139
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
NI L A +KLGDFG + I + +M+PE N
Sbjct: 140 AVRNI-LVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPE---SINFRRFTT 193
Query: 190 AVDIWSLGCVLVE-MSSGKRP--WAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W + E +S GK+P W E N ++ + G+ P+ C
Sbjct: 194 ASDVWMFAVCMWEILSFGKQPFFWLE---NKDVIGVLEKGDRLPKPDLCPPVLYTLMTRC 250
Query: 247 LRHDPAQRATIFELLQHPFLIVSCEEDV 274
+DP+ R EL+ + E+D+
Sbjct: 251 WDYDPSDRPRFTELVCSLSDVYQMEKDI 278
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 25/258 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQL-HKQNDARFV---KDMLVELRILEGINQKNLVK 66
G+G FG V+ + +VA+K + L + + + ++ E+ I+ +N N+VK
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT--I 124
YG+ + MV ME G L + + + R + I + I
Sbjct: 88 LYGLMHNPPRMV--MEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 125 VHRDIKSANIFLTAEGNS----LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
VHRD++S NIFL + + K+ DFG++ + S H+ ++G +G +MAPE +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ-SVHS-----VSGLLGNFQWMAPET-I 198
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGM----GETPTIPESLS 236
+ + D +S +L + +G+ P+ EY S +I F + M G PTIPE
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKIKF-INMIREEGLRPTIPEDCP 256
Query: 237 DEGQAFAELCLRHDPAQR 254
+ ELC DP +R
Sbjct: 257 PRLRNVIELCWSGDPKKR 274
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 114/256 (44%), Gaps = 13/256 (5%)
Query: 1 MSSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGIN 60
++ F + G+G FGKV + T EL A+K ++ V+ +VE R+L
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 61 QKN-LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL 119
+ L + + + + ME G L +Q E Y ++ + L
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFL 458
Query: 120 HENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEV 178
I++RD+K N+ L +EG+ +K+ DFG + I T F GT Y+APE+
Sbjct: 459 QSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTT----KXFCGTPDYIAPEI 513
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE 238
+G++VD W+ G +L EM +G+ P+ D + +F+ M P+S+S E
Sbjct: 514 IAYQP---YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LFQSIMEHNVAYPKSMSKE 568
Query: 239 GQAFAELCLRHDPAQR 254
A + + P +R
Sbjct: 569 AVAICKGLMTKHPGKR 584
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ L +EG+ +K+ DFG + I T F GT Y+APE+ +G++V
Sbjct: 472 NVMLDSEGH-IKIADFGMCKENIWDGVTT----KXFCGTPDYIAPEIIAYQP---YGKSV 523
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D W+ G +L EM +G+ G
Sbjct: 524 DWWAFGVLLYEMLAGQAPFEG 544
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 16/229 (6%)
Query: 48 DMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTED---GLPEVL 104
D V+L + E N+++Y+ E R+ + +ELC TL+ V+ + GL +
Sbjct: 65 DREVQL-LRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPIT 122
Query: 105 VRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKL----GDFGSAVKISAHTTV 160
+ +Q ++ LH IVHRD+K NI ++ K+ DFG K++
Sbjct: 123 L---LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQI 219
+G GT+ ++APE+ + K VDI+S GCV +S G P+ + Q
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK-SLQRQA 238
Query: 220 MFKVGMGETPTI-PESLSDE-GQAFAELCLRHDPAQRATIFELLQHPFL 266
+G + PE D + E + DP +R + +L+HPF
Sbjct: 239 NILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 322 LGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVL 377
+ DFG K++ +G GT+ ++APE+ + K VDI+S GCV
Sbjct: 164 ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 31/217 (14%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FG V+ A N A+K I+L + AR + ++ E++ L + +V+Y+
Sbjct: 14 GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKLEHPGIVRYFNA 71
Query: 71 EIHREE------------MVLFMELCTEGTLESLVQ---STEDGLPEVLVRRYTKQLVDA 115
+ + + + M+LC + L+ + + E+ V + + Q+ +A
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL-QIAEA 130
Query: 116 ISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAH-------TTVP--GELNG 166
+ LH ++HRD+K +NIF T + + +K+GDFG + T +P G
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 167 FVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM 203
VGT+ YM+PE + N H VDI+SLG +L E+
Sbjct: 190 QVGTKLYMSPEQ-IHGNSYSH--KVDIFSLGLILFEL 223
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAH-------TTVPG--ELNGFVGTQAYMAPEVFMDT 359
+NIF T + + +K+GDFG + T +P G VGT+ YM+PE +
Sbjct: 147 SNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ-IHG 204
Query: 360 NKVGHGRAVDIWSLGCVLVEM 380
N H VDI+SLG +L E+
Sbjct: 205 NSYSH--KVDIFSLGLILFEL 223
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 14/268 (5%)
Query: 11 GQGRFGKVYTAV-NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYG 69
G+G FG+VY V N GE + + K + + E I++ ++ ++VK G
Sbjct: 17 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG 76
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ I E + MEL G L ++ ++ L + + Y+ Q+ A++ L VHRDI
Sbjct: 77 I-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDI 135
Query: 130 KSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 189
NI L A +KLGDFG + I + +M+PE N
Sbjct: 136 AVRNI-LVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPE---SINFRRFTT 189
Query: 190 AVDIWSLGCVLVE-MSSGKRP--WAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
A D+W + E +S GK+P W E N ++ + G+ P+ C
Sbjct: 190 ASDVWMFAVCMWEILSFGKQPFFWLE---NKDVIGVLEKGDRLPKPDLCPPVLYTLMTRC 246
Query: 247 LRHDPAQRATIFELLQHPFLIVSCEEDV 274
+DP+ R EL+ + E+D+
Sbjct: 247 WDYDPSDRPRFTELVCSLSDVYQMEKDI 274
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 36/272 (13%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
S+ V GQG FG+V+ N T VA+K ++ + F++ E ++++ + +
Sbjct: 9 SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 63
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG----LPEVLVRRYTKQLVDAISA 118
LV+ Y V + E + + E ++G+L ++ E G LP+++ Q+ ++
Sbjct: 64 KLVQLYAV-VSEEPIXIVTEYMSKGSLLDFLKG-ETGKYLRLPQLV--DMAAQIASGMAY 119
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
+ VHRD+++ANI L E K+ DFG A I E N Q P
Sbjct: 120 VERMNYVHRDLRAANI-LVGENLVCKVADFGLARLI--------EDNEXTARQGAKFPIK 170
Query: 179 FMDTNKVGHGRAV---DIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGE----TPT 230
+ +GR D+WS G +L E+++ G+ P+ N +++ +V G P
Sbjct: 171 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPE 229
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
PESL D C R +P +R T FE LQ
Sbjct: 230 CPESLHD----LMCQCWRKEPEERPT-FEYLQ 256
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 18/259 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ--LHKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G+G FG+V++ LVA+K + L A+F++ E RIL+ + N+V+
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ----EARILKQYSHPNIVRLI 178
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
GV ++ + + MEL G + +++ L + + + L +HRD
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 129 IKSANIFLTAEGNSLKLGDFG-SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
+ + N +T E N LK+ DFG S + G L + APE N +
Sbjct: 239 LAARNCLVT-EKNVLKISDFGMSREEADGVXAASGGLRQV--PVKWTAPEAL---NYGRY 292
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
D+WS G +L E S G P+ SN Q V G PE D E C
Sbjct: 293 SSESDVWSFGILLWETFSLGASPYPNL-SNQQTREFVEKGGRLPCPELCPDAVFRLMEQC 351
Query: 247 LRHDPAQR---ATIFELLQ 262
++P QR +TI++ LQ
Sbjct: 352 WAYEPGQRPSFSTIYQELQ 370
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 126/256 (49%), Gaps = 30/256 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ A N+ + VA+K ++ + V+ L E +++ + LVK + V
Sbjct: 191 GAGQFGEVWMATYNKHTK-VAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTE---DGLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ +E + + E +G+L ++S E LP+++ ++ Q+ + ++ + + +HR
Sbjct: 246 -VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI--DFSAQIAEGMAFIEQRNYIHR 302
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D+++ANI ++A K+ DFG A ++ A + + APE N
Sbjct: 303 DLRAANILVSA-SLVCKIADFGLA-RVGAKFPI-----------KWTAPEAI---NFGSF 346
Query: 188 GRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
D+WS G +L+E+ + G+ P+ SN +++ + G PE+ +E C
Sbjct: 347 TIKSDVWSFGILLMEIVTYGRIPYPGM-SNPEVIRALERGYRMPRPENCPEELYNIMMRC 405
Query: 247 LRHDPAQRATIFELLQ 262
++ P +R T FE +Q
Sbjct: 406 WKNRPEERPT-FEYIQ 420
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 11 GQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
GQG FG VY + E VA+K + ++ R + L E +++G ++V
Sbjct: 26 GQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQS------TEDGLPEVLVRRYTK---QLVDAI 116
+ GV + ++ MEL G L+S ++S G P ++ + ++ D +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 117 SALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
+ L+ VHRD+ + N + A ++K+GDFG I G + + +MAP
Sbjct: 144 AYLNAKKFVHRDLAARNC-MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAP 201
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESL 235
E D + D+WS G VL E++S ++P+ SN Q++ V G P++
Sbjct: 202 ESLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQVLKFVMDGGYLDQPDNC 257
Query: 236 SDEGQAFAELCLRHDPAQRATIFELL 261
+ +C + +P R T E++
Sbjct: 258 PERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +V+ A + VA+K ++ D F E + +N +V Y
Sbjct: 21 GFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYAT 80
Query: 71 EIHREEM----VLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL---HENT 123
+ ME TL +V + P +R + + DA AL H+N
Sbjct: 81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----KRAIEVIADACQALNFSHQNG 136
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+K ANI ++A N++K+ DFG A I+ + +GT Y++PE
Sbjct: 137 IIHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE------ 189
Query: 184 KVGHGRAV----DIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
G +V D++SLGCVL E+ +G+ P+ DS + ++ + E P IP S EG
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQ-HVREDP-IPPSARHEG 245
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI ++A N++K+ DFG A I+ + +GT Y++PE G +V
Sbjct: 145 ANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-------ARGDSV 196
Query: 369 D----IWSLGCVLVEMSSGKTNLSG 389
D ++SLGCVL E+ +G+ +G
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 11 GQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
GQG FG VY + E VA+K + ++ R + L E +++G ++V
Sbjct: 23 GQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQS------TEDGLPEVLVRRYTK---QLVDAI 116
+ GV + ++ MEL G L+S ++S G P ++ + ++ D +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 117 SALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
+ L+ VHRD+ + N + A ++K+GDFG I G + + +MAP
Sbjct: 141 AYLNAKKFVHRDLAARNC-MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAP 198
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESL 235
E D + D+WS G VL E++S ++P+ SN Q++ V G P++
Sbjct: 199 ESLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQVLKFVMDGGYLDQPDNC 254
Query: 236 SDEGQAFAELCLRHDPAQRATIFELL 261
+ +C + +P R T E++
Sbjct: 255 PERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 18/259 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ--LHKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G+G FG+V++ LVA+K + L A+F++ E RIL+ + N+V+
Sbjct: 123 GRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ----EARILKQYSHPNIVRLI 178
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
GV ++ + + MEL G + +++ L + + + L +HRD
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 129 IKSANIFLTAEGNSLKLGDFG-SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
+ + N +T E N LK+ DFG S + G L + APE N +
Sbjct: 239 LAARNCLVT-EKNVLKISDFGMSREEADGVYAASGGLRQV--PVKWTAPEAL---NYGRY 292
Query: 188 GRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
D+WS G +L E S G P+ SN Q V G PE D E C
Sbjct: 293 SSESDVWSFGILLWETFSLGASPYPNL-SNQQTREFVEKGGRLPCPELCPDAVFRLMEQC 351
Query: 247 LRHDPAQR---ATIFELLQ 262
++P QR +TI++ LQ
Sbjct: 352 WAYEPGQRPSFSTIYQELQ 370
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 133/329 (40%), Gaps = 92/329 (27%)
Query: 11 GQGRFGKVYTAVNNETG-ELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKN------ 63
G+G FGKV ++++ G VA+K ++ N R+ + E+++LE +N +
Sbjct: 23 GEGAFGKVVECIDHKAGGRHVAVKIVK----NVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 64 ---LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDG-LPEVL--VRRYTKQLVDAIS 117
+++++ H + + EL T + + E+G LP L +R+ Q+ +++
Sbjct: 79 CVQMLEWFE---HHGHICIVFELLGLSTYDFI---KENGFLPFRLDHIRKMAYQICKSVN 132
Query: 118 ALHENTIVHRDIKSANIFL------------------TAEGNSLKLGDFGSAVKISAHTT 159
LH N + H D+K NI T +K+ DFGSA H +
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS 192
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQI 219
V + Y APEV + +G + D+WS+GC+L+E G + +DS +
Sbjct: 193 T------LVXXRHYRAPEVIL---ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 220 -MFKVGMGETPTIP-----------------ESLSDEGQAFAELC--------------- 246
M + +G P + S G+ + C
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 247 ---------LRHDPAQRATIFELLQHPFL 266
L +DPA+R T+ E L+HPF
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFF 332
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 319 SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLV 378
+K+ DFGSA H + V + Y APEV + +G + D+WS+GC+L+
Sbjct: 175 DIKVVDFGSATYDDEHHST------LVXXRHYRAPEVIL---ALGWSQPCDVWSIGCILI 225
Query: 379 EMSSGKT 385
E G T
Sbjct: 226 EYYLGFT 232
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 11 GQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
GQG FG VY + E VA+K + ++ R + L E +++G ++V
Sbjct: 26 GQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQS------TEDGLPEVLVRRYTK---QLVDAI 116
+ GV + ++ MEL G L+S ++S G P ++ + ++ D +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 117 SALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
+ L+ VHRD+ + N + A ++K+GDFG I G + + +MAP
Sbjct: 144 AYLNAKKFVHRDLAARNC-MVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR-WMAP 201
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESL 235
E D + D+WS G VL E++S ++P+ SN Q++ V G P++
Sbjct: 202 ESLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQVLKFVMDGGYLDQPDNC 257
Query: 236 SDEGQAFAELCLRHDPAQRATIFELL 261
+ +C + +P R T E++
Sbjct: 258 PERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 35 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 94 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 153
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
+K +NI + ++ +LK+ DFG A ++ VP FV T+ Y APEV + +G+
Sbjct: 154 LKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVP-----FVVTRYYRAPEVILG---MGY 204
Query: 188 GRAVDIWSLGCVLVEMSSG 206
VDIWS+GC++ EM G
Sbjct: 205 KENVDIWSVGCIMGEMIKG 223
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 367
+NI + ++ +LK+ DFG A ++ VP FV T+ Y APEV + +G+
Sbjct: 157 SNIVVKSDC-TLKILDFGLARTAGTSFMMVP-----FVVTRYYRAPEVILG---MGYKEN 207
Query: 368 VDIWSLGCVLVEMSSG 383
VDIWS+GC++ EM G
Sbjct: 208 VDIWSVGCIMGEMIKG 223
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 11 GQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
GQG FG VY + E VA+K + ++ R + L E +++G ++V
Sbjct: 26 GQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQS------TEDGLPEVLVRRYTK---QLVDAI 116
+ GV + ++ MEL G L+S ++S G P ++ + ++ D +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 117 SALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
+ L+ VHRD+ + N + A ++K+GDFG I G + + +MAP
Sbjct: 144 AYLNAKKFVHRDLAARNC-MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAP 201
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESL 235
E D + D+WS G VL E++S ++P+ SN Q++ V G P++
Sbjct: 202 ESLKDG---VFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQVLKFVMDGGYLDQPDNC 257
Query: 236 SDEGQAFAELCLRHDPAQRATIFELL 261
+ +C + +P R T E++
Sbjct: 258 PERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +V+ A + VA+K ++ D F E + +N +V Y
Sbjct: 21 GFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT 80
Query: 71 EIHREEM----VLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL---HENT 123
+ ME TL +V + P +R + + DA AL H+N
Sbjct: 81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----KRAIEVIADACQALNFSHQNG 136
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+K ANI ++A N++K+ DFG A I+ + +GT Y++PE
Sbjct: 137 IIHRDVKPANILISAT-NAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE------ 189
Query: 184 KVGHGRAV----DIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
G +V D++SLGCVL E+ +G+ P+ DS + ++ + E P IP S EG
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQ-HVREDP-IPPSARHEG 245
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI ++A N++K+ DFG A I+ + +GT Y++PE G +V
Sbjct: 145 ANILISAT-NAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ-------ARGDSV 196
Query: 369 D----IWSLGCVLVEMSSGKTNLSG 389
D ++SLGCVL E+ +G+ +G
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +V+ A + VA+K ++ D F E + +N +V Y
Sbjct: 21 GFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT 80
Query: 71 EIHREEM----VLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL---HENT 123
+ ME TL +V + P +R + + DA AL H+N
Sbjct: 81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----KRAIEVIADACQALNFSHQNG 136
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+K ANI ++A N++K+ DFG A I+ + +GT Y++PE
Sbjct: 137 IIHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE------ 189
Query: 184 KVGHGRAV----DIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
G +V D++SLGCVL E+ +G+ P+ DS + ++ + E P IP S EG
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQ-HVREDP-IPPSARHEG 245
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI ++A N++K+ DFG A I+ + +GT Y++PE G +V
Sbjct: 145 ANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-------ARGDSV 196
Query: 369 D----IWSLGCVLVEMSSGKTNLSG 389
D ++SLGCVL E+ +G+ +G
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +V+ A + VA+K ++ D F E + +N +V Y
Sbjct: 38 GFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT 97
Query: 71 EIHREEM----VLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL---HENT 123
+ ME TL +V + P +R + + DA AL H+N
Sbjct: 98 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----KRAIEVIADACQALNFSHQNG 153
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+K ANI ++A N++K+ DFG A I+ + +GT Y++PE
Sbjct: 154 IIHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE------ 206
Query: 184 KVGHGRAV----DIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
G +V D++SLGCVL E+ +G+ P+ DS + ++ + E P IP S EG
Sbjct: 207 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQ-HVREDP-IPPSARHEG 262
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI ++A N++K+ DFG A I+ + +GT Y++PE G +V
Sbjct: 162 ANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-------ARGDSV 213
Query: 369 D----IWSLGCVLVEMSSGKTNLSG 389
D ++SLGCVL E+ +G+ +G
Sbjct: 214 DARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 25/258 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQL-HKQNDARFV---KDMLVELRILEGINQKNLVK 66
G+G FG V+ + +VA+K + L + + + ++ E+ I+ +N N+VK
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT--I 124
YG+ + MV ME G L + + + R + I + I
Sbjct: 88 LYGLMHNPPRMV--MEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 125 VHRDIKSANIFLTAEGNS----LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
VHRD++S NIFL + + K+ DFG + + S H+ ++G +G +MAPE +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-SVHS-----VSGLLGNFQWMAPET-I 198
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGM----GETPTIPESLS 236
+ + D +S +L + +G+ P+ EY S +I F + M G PTIPE
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKIKF-INMIREEGLRPTIPEDCP 256
Query: 237 DEGQAFAELCLRHDPAQR 254
+ ELC DP +R
Sbjct: 257 PRLRNVIELCWSGDPKKR 274
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEG---NSLKLGDFGSAVKISA 156
LP +V+ Q++D I LH N ++HRD+K ANI + EG +K+ D G A ++
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 157 HTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM 203
+L+ V T Y APE+ + + +A+DIW++GC+ E+
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARH--YTKAIDIWAIGCIFAEL 229
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 309 ANIFLTAEG---NSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 365
ANI + EG +K+ D G A ++ +L+ V T Y APE+ + +
Sbjct: 157 ANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH--YT 214
Query: 366 RAVDIWSLGCVLVEM 380
+A+DIW++GC+ E+
Sbjct: 215 KAIDIWAIGCIFAEL 229
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 11 GQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
GQG FG VY + E VA+K + ++ R + L E +++G ++V
Sbjct: 26 GQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQS------TEDGLPEVLVRRYTK---QLVDAI 116
+ GV + ++ MEL G L+S ++S G P ++ + ++ D +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 117 SALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
+ L+ VHRD+ + N + A ++K+GDFG I G + + +MAP
Sbjct: 144 AYLNAKKFVHRDLAARNC-MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMAP 201
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESL 235
E D + D+WS G VL E++S ++P+ SN Q++ V G P++
Sbjct: 202 ESLKDG---VFTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQVLKFVMDGGYLDQPDNC 257
Query: 236 SDEGQAFAELCLRHDPAQRATIFELL 261
+ +C + +P R T E++
Sbjct: 258 PERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +V+ A + VA+K ++ D F E + +N +V Y
Sbjct: 21 GFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT 80
Query: 71 EIHREEM----VLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL---HENT 123
+ ME TL +V + P +R + + DA AL H+N
Sbjct: 81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----KRAIEVIADACQALNFSHQNG 136
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+K ANI ++A N++K+ DFG A I+ + +GT Y++PE
Sbjct: 137 IIHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE------ 189
Query: 184 KVGHGRAV----DIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
G +V D++SLGCVL E+ +G+ P+ DS + ++ + E P IP S EG
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQ-HVREDP-IPPSARHEG 245
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI ++A N++K+ DFG A I+ + +GT Y++PE G +V
Sbjct: 145 ANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-------ARGDSV 196
Query: 369 D----IWSLGCVLVEMSSGKTNLSG 389
D ++SLGCVL E+ +G+ +G
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 33/292 (11%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGE-----LVAMKEIQLHKQNDARFVKDMLVELRIL 56
+++ F + G G FGKV A G+ VA+K ++ D + + ++ EL+I+
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIM 95
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQ-------STEDGLPEVL--VR 106
+ Q +N+V G H +++ E C G L + ++ EDG P L +
Sbjct: 96 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 155
Query: 107 RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG 166
++ Q+ ++ L +HRD+ + N+ LT G+ K+GDFG A I + + N
Sbjct: 156 HFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 167 FVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEY--DSNYQIMFKV 223
+ + +MAPE D + D+WS G +L E+ S G P+ +S + + K
Sbjct: 215 RLPVK-WMAPESIFD---CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 270
Query: 224 G--MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
G M + P+++ QA C +P R T ++ FL +ED
Sbjct: 271 GYQMAQPAFAPKNIYSIMQA----CWALEPTHRPTFQQICS--FLQEQAQED 316
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G GKV + TG+ A+K L+ AR +++ + G + ++ Y
Sbjct: 38 GLGVNGKVLECFHRRTGQKCALK--LLYDSPKAR--QEVDHHWQASGGPHIVCILDVYEN 93
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
H + +L + C EG L S +Q D E + + AI LH + I HRD
Sbjct: 94 MHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD 153
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ LKL DFG A + T L T Y+APEV
Sbjct: 154 VKPENLLYTSKEKDAVLKLTDFGFAKE-----TTQNALQTPCYTPYYVAPEVL---GPEK 205
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIM-------FKVGMGETPTIPE--SLSD 237
+ ++ D+WSLG ++ + G P+ Y + Q + ++G P PE +S+
Sbjct: 206 YDKSCDMWSLGVIMYILLCGFPPF--YSNTGQAISPGMKRRIRLGQYGFPN-PEWSEVSE 262
Query: 238 EGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ + L L+ DP +R TI + + HP++
Sbjct: 263 DAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 25/262 (9%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG V + A + +T VA+K ++ + + D + E+ + ++ +NL++
Sbjct: 17 GDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
YGV + M + EL G+L ++ + + RY Q+ + + L +H
Sbjct: 76 LYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQ------AYMAPEVFM 180
RD+ + N+ L A + +K+GDFG +P + +V + A+ APE +
Sbjct: 135 RDLAARNLLL-ATRDLVKIGDFGLM------RALPQNDDHYVMQEHRKVPFAWCAPES-L 186
Query: 181 DTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGM-GETPTIPESLSDE 238
T H A D W G L EM + G+ PW + + QI+ K+ GE PE +
Sbjct: 187 KTRTFSH--ASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQD 243
Query: 239 GQAFAELCLRHDPAQRATIFEL 260
C H P R T L
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVAL 265
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 25/262 (9%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG V + A + +T VA+K ++ + + D + E+ + ++ +NL++
Sbjct: 21 GDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
YGV + M + EL G+L ++ + + RY Q+ + + L +H
Sbjct: 80 LYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQ------AYMAPEVFM 180
RD+ + N+ L A + +K+GDFG +P + +V + A+ APE +
Sbjct: 139 RDLAARNLLL-ATRDLVKIGDFGLM------RALPQNDDHYVMQEHRKVPFAWCAPES-L 190
Query: 181 DTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGM-GETPTIPESLSDE 238
T H A D W G L EM + G+ PW + + QI+ K+ GE PE +
Sbjct: 191 KTRTFSH--ASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQD 247
Query: 239 GQAFAELCLRHDPAQRATIFEL 260
C H P R T L
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVAL 269
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 31/265 (11%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG V + A + +T VA+K ++ + + D + E+ + ++ +NL++
Sbjct: 17 GDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
YGV + M + EL G+L ++ + + RY Q+ + + L +H
Sbjct: 76 LYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 127 RDIKSANIFLTAEGNSLKLGDFG---------SAVKISAHTTVPGELNGFVGTQAYMAPE 177
RD+ + N+ L A + +K+GDFG + H VP A+ APE
Sbjct: 135 RDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF---------AWCAPE 184
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGM-GETPTIPESL 235
+ T H A D W G L EM + G+ PW + + QI+ K+ GE PE
Sbjct: 185 S-LKTRTFSH--ASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDC 240
Query: 236 SDEGQAFAELCLRHDPAQRATIFEL 260
+ C H P R T L
Sbjct: 241 PQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 31/265 (11%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG V + A + +T VA+K ++ + + D + E+ + ++ +NL++
Sbjct: 27 GDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
YGV + M + EL G+L ++ + + RY Q+ + + L +H
Sbjct: 86 LYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 127 RDIKSANIFLTAEGNSLKLGDFG---------SAVKISAHTTVPGELNGFVGTQAYMAPE 177
RD+ + N+ L A + +K+GDFG + H VP A+ APE
Sbjct: 145 RDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF---------AWCAPE 194
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGM-GETPTIPESL 235
+ T H A D W G L EM + G+ PW + + QI+ K+ GE PE
Sbjct: 195 S-LKTRTFSH--ASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDC 250
Query: 236 SDEGQAFAELCLRHDPAQRATIFEL 260
+ C H P R T L
Sbjct: 251 PQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 33/292 (11%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGE-----LVAMKEIQLHKQNDARFVKDMLVELRIL 56
+++ F + G G FGKV A G+ VA+K ++ D + + ++ EL+I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIM 103
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQ-------STEDGLPEVL--VR 106
+ Q +N+V G H +++ E C G L + ++ EDG P L +
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLL 163
Query: 107 RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG 166
++ Q+ ++ L +HRD+ + N+ LT G+ K+GDFG A I + + N
Sbjct: 164 HFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 167 FVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEY--DSNYQIMFKV 223
+ + +MAPE D + D+WS G +L E+ S G P+ +S + + K
Sbjct: 223 RLPVK-WMAPESIFD---CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 278
Query: 224 G--MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
G M + P+++ QA C +P R T ++ FL +ED
Sbjct: 279 GYQMAQPAFAPKNIYSIMQA----CWALEPTHRPTFQQICS--FLQEQAQED 324
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G GKV + TG+ A+K L+ AR +++ + G + ++ Y
Sbjct: 19 GLGVNGKVLECFHRRTGQKCALK--LLYDSPKAR--QEVDHHWQASGGPHIVCILDVYEN 74
Query: 71 EIHREEMVLFMELCTEG-TLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
H + +L + C EG L S +Q D E + + AI LH + I HRD
Sbjct: 75 MHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRD 134
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ LKL DFG A + T L T Y+APEV
Sbjct: 135 VKPENLLYTSKEKDAVLKLTDFGFAKE-----TTQNALQTPCYTPYYVAPEVL---GPEK 186
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIM-------FKVGMGETPTIPE--SLSD 237
+ ++ D+WSLG ++ + G P+ Y + Q + ++G P PE +S+
Sbjct: 187 YDKSCDMWSLGVIMYILLCGFPPF--YSNTGQAISPGMKRRIRLGQYGFPN-PEWSEVSE 243
Query: 238 EGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ + L L+ DP +R TI + + HP++
Sbjct: 244 DAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 31/265 (11%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG V + A + +T VA+K ++ + + D + E+ + ++ +NL++
Sbjct: 21 GDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
YGV + M + EL G+L ++ + + RY Q+ + + L +H
Sbjct: 80 LYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 127 RDIKSANIFLTAEGNSLKLGDFG---------SAVKISAHTTVPGELNGFVGTQAYMAPE 177
RD+ + N+ L A + +K+GDFG + H VP A+ APE
Sbjct: 139 RDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF---------AWCAPE 188
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGM-GETPTIPESL 235
+ T H A D W G L EM + G+ PW + + QI+ K+ GE PE
Sbjct: 189 S-LKTRTFSH--ASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDC 244
Query: 236 SDEGQAFAELCLRHDPAQRATIFEL 260
+ C H P R T L
Sbjct: 245 PQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 11 GQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
GQG FG VY + E VA+K + ++ R + L E +++G ++V
Sbjct: 25 GQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQS------TEDGLPEVLVRRYTK---QLVDAI 116
+ GV + ++ MEL G L+S ++S G P ++ + ++ D +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 117 SALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
+ L+ VHRD+ + N + A ++K+GDFG I G + + +MAP
Sbjct: 143 AYLNAKKFVHRDLAARNC-MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WMAP 200
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESL 235
E D + D+WS G VL E++S ++P+ SN Q++ V G P++
Sbjct: 201 ESLKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGL-SNEQVLKFVMDGGYLDQPDNC 256
Query: 236 SDEGQAFAELCLRHDPAQRATIFELL 261
+ +C + +P R T E++
Sbjct: 257 PERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 26/240 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +V+ A + VA+K ++ D F E + +N +V Y
Sbjct: 21 GFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT 80
Query: 71 EIHREEM----VLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL---HENT 123
+ ME TL +V + P +R + + DA AL H+N
Sbjct: 81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP----KRAIEVIADACQALNFSHQNG 136
Query: 124 IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
I+HRD+K ANI ++A N++K+ DFG A I+ + +GT Y++PE
Sbjct: 137 IIHRDVKPANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE------ 189
Query: 184 KVGHGRAV----DIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEG 239
G +V D++SLGCVL E+ +G+ P+ DS + ++ + E P IP S EG
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPDSVAYQ-HVREDP-IPPSARHEG 245
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
ANI ++A N++K+ DFG A I+ + +GT Y++PE G +V
Sbjct: 145 ANIMISAT-NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-------ARGDSV 196
Query: 369 D----IWSLGCVLVEMSSGKTNLSG 389
D ++SLGCVL E+ +G+ +G
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 30/217 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G +G VY A + T + VA+K++ + D K +L E+ IL + +++ Y +
Sbjct: 35 GRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-DLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 71 EIHREEMVLFMEL-----CTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
I ++++ F EL + L+ L + T L E ++ L+ + +HE+ I+
Sbjct: 94 II-PDDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEEHIKTILYNLLLGENFIHESGII 151
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV-----------PG--------ELNG 166
HRD+K AN L + S+K+ DFG A I++ PG +L
Sbjct: 152 HRDLKPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTS 210
Query: 167 FVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM 203
V T+ Y APE+ + + + +++DIWS GC+ E+
Sbjct: 211 HVVTRWYRAPELIL--LQENYTKSIDIWSTGCIFAEL 245
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 22/91 (24%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTV-----------PG--------ELNGFVGTQA 349
AN L + S+K+ DFG A I++ PG +L V T+
Sbjct: 158 ANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRW 216
Query: 350 YMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM 380
Y APE+ + + + +++DIWS GC+ E+
Sbjct: 217 YRAPELILL--QENYTKSIDIWSTGCIFAEL 245
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 234 SLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNPRSVPASVLQDYLKLGI 293
S+SD+G E L+ +P +R TI + L HP+L + V L+++ I
Sbjct: 333 SISDDGINLLESMLKFNPNKRITIDQALDHPYL-----------KDVRKKKLENFSTKKI 381
Query: 294 VLP 296
+LP
Sbjct: 382 ILP 384
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 25/262 (9%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG V + A + +T VA+K ++ + + D + E+ + ++ +NL++
Sbjct: 17 GDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
YGV + M + EL G+L ++ + + RY Q+ + + L +H
Sbjct: 76 LYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQ------AYMAPEVFM 180
RD+ + N+ L A + +K+GDFG +P + +V + A+ APE +
Sbjct: 135 RDLAARNLLL-ATRDLVKIGDFGLM------RALPQNDDHYVMQEHRKVPFAWCAPES-L 186
Query: 181 DTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGM-GETPTIPESLSDE 238
T H A D W G L EM + G+ PW + + QI+ K+ GE PE +
Sbjct: 187 KTRTFSH--ASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQD 243
Query: 239 GQAFAELCLRHDPAQRATIFEL 260
C H P R T L
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVAL 265
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 31/265 (11%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG V + A + +T VA+K ++ + + D + E+ + ++ +NL++
Sbjct: 27 GDGSFGVVRRGEWDAPSGKTVS-VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
YGV + M + EL G+L ++ + + RY Q+ + + L +H
Sbjct: 86 LYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 127 RDIKSANIFLTAEGNSLKLGDFG---------SAVKISAHTTVPGELNGFVGTQAYMAPE 177
RD+ + N+ L A + +K+GDFG + H VP A+ APE
Sbjct: 145 RDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF---------AWCAPE 194
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGM-GETPTIPESL 235
+ T H A D W G L EM + G+ PW + + QI+ K+ GE PE
Sbjct: 195 S-LKTRTFSH--ASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDC 250
Query: 236 SDEGQAFAELCLRHDPAQRATIFEL 260
+ C H P R T L
Sbjct: 251 PQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 123/299 (41%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E VA+K ++ K+ + +L LR G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 104 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 159 PHNVLIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 211
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVLIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDA-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSG 206
VDIWS+GC++ EM G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDA-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSG 383
DIWS+GC++ EM G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSG 206
VDIWS+GC++ EM G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSG 383
DIWS+GC++ EM G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 34 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 93 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 152
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 153 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 204
Query: 189 RAVDIWSLGCVLVEMSSG 206
VDIWS+GC++ EM G
Sbjct: 205 ENVDIWSVGCIMGEMIKG 222
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 156 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 207
Query: 369 DIWSLGCVLVEMSSG 383
DIWS+GC++ EM G
Sbjct: 208 DIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSG 206
VDIWS+GC++ EM G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSG 383
DIWS+GC++ EM G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 43/225 (19%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY-YG 69
G+G +G VY A + + VA+K++ R +D++ RIL I N +K Y
Sbjct: 37 GRGSYGYVYLAYDKNANKNVAIKKVN-------RMFEDLIDCKRILREITILNRLKSDYI 89
Query: 70 VEIHR----EEMVLFMEL-----CTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
+ +H E+++ F EL + L+ L + T L E V+ L+ +H
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFK-TPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV--------------PG---- 162
E+ I+HRD+K AN L + S+K+ DFG A I++ + PG
Sbjct: 149 ESGIIHRDLKPANCLLNQDC-SVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNK 207
Query: 163 ----ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM 203
+L V T+ Y APE+ + + ++DIWS GC+ E+
Sbjct: 208 NLKKQLTSHVVTRWYRAPELILLQE--NYTNSIDIWSTGCIFAEL 250
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 25/94 (26%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTV--------------PG--------ELNGFVG 346
AN L + S+K+ DFG A I++ + PG +L V
Sbjct: 160 ANCLLNQDC-SVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVV 218
Query: 347 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM 380
T+ Y APE+ + + ++DIWS GC+ E+
Sbjct: 219 TRWYRAPELILLQE--NYTNSIDIWSTGCIFAEL 250
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 109/253 (43%), Gaps = 9/253 (3%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G VY A + VA+K I + + +K E+ ++ +N+V V
Sbjct: 20 GGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDV 79
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + L ME TL ++S L +T Q++D I H+ IVHRDIK
Sbjct: 80 DEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIK 138
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
NI + + +LK+ DFG A +S T + N +GT Y +PE
Sbjct: 139 PQNILIDS-NKTLKIFDFGIAKALSE--TSLTQTNHVLGTVQYFSPE---QAKGEATDEC 192
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPESL-SDEGQAFAELCLRH 249
DI+S+G VL EM G+ P+ ++ I K P + + D Q+ + + LR
Sbjct: 193 TDIYSIGIVLYEMLVGEPPF-NGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRA 251
Query: 250 DPAQRATIFELLQ 262
+A ++ +Q
Sbjct: 252 TEKDKANRYKTIQ 264
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 312 FLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIW 371
L +LK+ DFG A +S T + N +GT Y +PE DI+
Sbjct: 142 ILIDSNKTLKIFDFGIAKALSE--TSLTQTNHVLGTVQYFSPE---QAKGEATDECTDIY 196
Query: 372 SLGCVLVEMSSGKTNLSG 389
S+G VL EM G+ +G
Sbjct: 197 SIGIVLYEMLVGEPPFNG 214
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 15/172 (8%)
Query: 106 RRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN 165
R + Q+V AI H +VHRDIK NI + KL DFGS +
Sbjct: 142 RCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP-----YT 196
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGM 225
F GT+ Y PE + H +WSLG +L +M G P ++ + +I+
Sbjct: 197 DFDGTRVYSPPEWI--SRHQYHALPATVWSLGILLYDMVCGDIP---FERDQEIL----E 247
Query: 226 GETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDVCNP 277
E P +S + A CL P+ R ++ E+L P++ E+ NP
Sbjct: 248 AEL-HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNP 298
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
NI + KL DFGS + F GT+ Y PE + H
Sbjct: 169 NILIDLRRGCAKLIDFGSGALLHDEP-----YTDFDGTRVYSPPEWI--SRHQYHALPAT 221
Query: 370 IWSLGCVLVEMSSG 383
+WSLG +L +M G
Sbjct: 222 VWSLGILLYDMVCG 235
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 25/258 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQL-HKQNDARFV---KDMLVELRILEGINQKNLVK 66
G+G FG V+ + +VA+K + L + + + ++ E+ I+ +N N+VK
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT--I 124
YG+ + MV ME G L + + + R + I + I
Sbjct: 88 LYGLMHNPPRMV--MEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 125 VHRDIKSANIFLTAEGNS----LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
VHRD++S NIFL + + K+ DF S + S H+ ++G +G +MAPE +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADF-SLSQQSVHS-----VSGLLGNFQWMAPET-I 198
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGM----GETPTIPESLS 236
+ + D +S +L + +G+ P+ EY S +I F + M G PTIPE
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKIKF-INMIREEGLRPTIPEDCP 256
Query: 237 DEGQAFAELCLRHDPAQR 254
+ ELC DP +R
Sbjct: 257 PRLRNVIELCWSGDPKKR 274
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FGKV Y N+ TGE+VA+K ++ R E+ IL + ++++K
Sbjct: 40 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR--SGWKQEIDILRTLYHEHIIK 97
Query: 67 YYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y G + + L ME G+L + GL ++L+ + +Q+ + ++ LH
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHAQHY 155
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
+HRD+ + N+ L + +K+GDFG A + H +G Y APE +
Sbjct: 156 IHRDLAARNVLLDND-RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYK 213
Query: 184 KVGHGRAVDIWSLGCVLVEM 203
A D+WS G L E+
Sbjct: 214 FY---YASDVWSFGVTLYEL 230
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDA-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSG 206
VDIWS+GC++ EM G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDA-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSG 383
DIWS+GC++ EM G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSG 206
VDIWS+GC++ EM G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSG 383
DIWS+GC++ EM G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDA-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSG 206
VDIWS+GC++ EM G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDA-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSG 383
DIWS+GC++ EM G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G+FG+VY V + VA+K + + D V++ L E +++ I
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 66
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 127 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPES-L 182
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 183 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY 240
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 241 ELMRA----CWQWNPSDRPSFAEIHQ 262
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 66
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + +E T G L+ L + + V++ Q+ A+ L
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 127 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPES-L 182
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 183 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY 240
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 241 ELMRA----CWQWNPSDRPSFAEIHQ 262
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 11 GQGRFGKVYTA-VNNET---GELVAMKEI---QLHKQNDARFVKDMLVELRILEGINQKN 63
G+G FG VY VNN T +L AM +I +L +Q D E+++ +N
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ--------EIKVXAKCQHEN 82
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR---RYTKQLVDAISALH 120
LV+ G +++ L G+L + S DG P + + + + I+ LH
Sbjct: 83 LVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
EN +HRDIKSANI L E + K+ DFG A + S + VGT AY APE
Sbjct: 142 ENHHIHRDIKSANILLD-EAFTAKISDFGLA-RASEKFAQXVXXSRIVGTTAYXAPEALR 199
Query: 181 D--TNKVGHGRAVDIWSLGCVLVEMSSG 206
T K DI+S G VL+E+ +G
Sbjct: 200 GEITPK------SDIYSFGVVLLEIITG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A + E V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPE----VVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSG 206
VDIWS+GC++ EM G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A + E V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDC-TLKILDFGLARTAGTSFMMTPE----VVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSG 383
DIWS+GC++ EM G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 122/267 (45%), Gaps = 21/267 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 70
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHT-TVPGELNGFVGTQAYMAPEVF 179
+ +HRD+ + N L E + +K+ DFG + ++ T T P G + APE
Sbjct: 131 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAPA---GAKFPIKWTAPES- 185
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESL 235
+ NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 186 LAYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV 243
Query: 236 SDEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 244 YELMRA----CWQWNPSDRPSFAEIHQ 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 122/267 (45%), Gaps = 21/267 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 69
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHT-TVPGELNGFVGTQAYMAPEVF 179
+ +HRD+ + N L E + +K+ DFG + ++ T T P G + APE
Sbjct: 130 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAPA---GAKFPIKWTAPES- 184
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESL 235
+ NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 185 LAYNKFSIKS--DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV 242
Query: 236 SDEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 243 YELMRA----CWQWNPSDRPSFAEIHQ 265
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 38 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 97 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 156
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 157 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 208
Query: 189 RAVDIWSLGCVLVEMSSGK 207
VD+WS+GC++ EM K
Sbjct: 209 ENVDLWSVGCIMGEMVCHK 227
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 160 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 211
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS+GC++ EM K G
Sbjct: 212 DLWSVGCIMGEMVCHKILFPG 232
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 44/226 (19%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNL-----V 65
G G FG+V + + + A+K ++ N ++ + +E IL+ I ++ V
Sbjct: 44 GDGTFGRVLLCQHIDNKKYYAVKVVR----NIKKYTRSAKIEADILKKIQNDDINNNNIV 99
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
KY+G ++ + M L E E + ++ +G ++ Y +++ A++ L + ++
Sbjct: 100 KYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLT 159
Query: 126 HRDIKSANIFL------------------------TAEGNSLKLGDFGSAVKISAHTTVP 161
H D+K NI L + +KL DFG A T
Sbjct: 160 HTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA-------TFK 212
Query: 162 GELNG-FVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSG 206
+ +G + T+ Y APEV ++ +G + D+WS GCVL E+ +G
Sbjct: 213 SDYHGSIINTRQYRAPEVILN---LGWDVSSDMWSFGCVLAELYTG 255
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 315 AEGNSLKLGDFGSAVKISAHTTVPGELNG-FVGTQAYMAPEVFMDTNKVGHGRAVDIWSL 373
+ +KL DFG A T + +G + T+ Y APEV ++ +G + D+WS
Sbjct: 196 TKSTGIKLIDFGCA-------TFKSDYHGSIINTRQYRAPEVILN---LGWDVSSDMWSF 245
Query: 374 GCVLVEMSSG 383
GCVL E+ +G
Sbjct: 246 GCVLAELYTG 255
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 52/284 (18%)
Query: 11 GQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G FGKV+ A + LVA+K + K KD E +L + +++V
Sbjct: 24 GEGAFGKVFLAECYNLSPTKDKMLVAVKAL---KDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQST-----------------EDGLPEVLVRRY 108
K+YGV + +++ E G L +++ E GL ++L
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML--HI 138
Query: 109 TKQLVDAISALHENTIVHRDIKSANIFLTAEGNSL-KLGDFGSA--------VKISAHTT 159
Q+ + L VHRD+ + N + A N L K+GDFG + ++ HT
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGA--NLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQ 218
+P +M PE M D+WS G +L E+ + GK+PW + SN +
Sbjct: 197 LPIR---------WMPPESIMYRKFTTES---DVWSFGVILWEIFTYGKQPWFQL-SNTE 243
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
++ + G P E C + +P QR I E+ +
Sbjct: 244 VIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYK 287
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 27 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 86 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 145
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 146 LKPSNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 197
Query: 189 RAVDIWSLGCVLVEMSSGK 207
VD+WS+GC++ EM K
Sbjct: 198 ENVDLWSVGCIMGEMVCHK 216
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 149 SNIVVKSDC-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 200
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS+GC++ EM K G
Sbjct: 201 DLWSVGCIMGEMVCHKILFPG 221
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 129/314 (41%), Gaps = 53/314 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 104 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 159 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 211
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFL--IVSCE 271
L S E F + LR+D R T E ++HP+ +V +
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYPVVKEQ 331
Query: 272 EDVCNPRSVPASVL 285
C +V +S L
Sbjct: 332 SQPCADNAVLSSGL 345
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + +E T G L+ L + + V++ Q+ A+ L
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 129 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 184
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 185 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 243 ELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 104/267 (38%), Gaps = 22/267 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G F V G A+K I H+Q D + R+ N LV Y
Sbjct: 38 GEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLR 97
Query: 71 EI-HREEMVLFMELCTEGTLESLVQSTEDG---LPEVLVRRYTKQLVDAISALHENTIVH 126
E + E L + GTL + ++ +D L E + + + A+H H
Sbjct: 98 ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAH 157
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFV--------GTQAYMAPEV 178
RD+K NI L EG + L D GS + H V G T +Y APE+
Sbjct: 158 RDLKPTNILLGDEGQPV-LMDLGSMNQACIH--VEGSRQALTLQDWAAQRCTISYRAPEL 214
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMG--ETPTIPESLS 236
F + D+WSLGCVL M G+ P YD +Q V + +IP+S
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGEGP---YDMVFQKGDSVALAVQNQLSIPQSPR 271
Query: 237 DEGQAFAEL--CLRHDPAQRATIFELL 261
+ L + DP QR I LL
Sbjct: 272 HSSALWQLLNSMMTVDPHQRPHIPLLL 298
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFV--------GTQAYMAPEVFMDTNK 361
NI L EG + L D GS + H V G T +Y APE+F +
Sbjct: 164 NILLGDEGQPV-LMDLGSMNQACIH--VEGSRQALTLQDWAAQRCTISYRAPELFSVQSH 220
Query: 362 VGHGRAVDIWSLGCVLVEMSSGK 384
D+WSLGCVL M G+
Sbjct: 221 CVIDERTDVWSLGCVLYAMMFGE 243
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + +E T G L+ L + + V++ Q+ A+ L
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 129 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 184
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 185 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 243 ELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 16/260 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+GRFG+VY GE VA++ I + + N+ + +K E+ +N+V + G
Sbjct: 42 GKGRFGQVYHG--RWHGE-VAIRLIDIERDNEDQ-LKAFKREVMAYRQTRHENVVLFMGA 97
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + + LC TL S+V+ + L R+ +++V + LH I+H+D+K
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLK 157
Query: 131 SANIFLTAEGNSLKLGDFG--SAVKISAHTTVPGELNGFVGTQAYMAPEVF------MDT 182
S N+F + + + DFG S + +L G ++APE+ +
Sbjct: 158 SKNVFY--DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEE 215
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE-SLSDEGQA 241
+K+ + D+++LG + E+ + + P+ + I++++G G P + + + E
Sbjct: 216 DKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-AIIWQMGTGMKPNLSQIGMGKEISD 274
Query: 242 FAELCLRHDPAQRATIFELL 261
C + +R T +L+
Sbjct: 275 ILLFCWAFEQEERPTFTKLM 294
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG++Y N +T E VA+K + ++ + + RIL+G V+++GV
Sbjct: 16 GSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKI--YRILQGGTGIPNVRWFGV 73
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
E + VL M+L +LE L L V Q+++ + +H + +HRDIK
Sbjct: 74 E--GDYNVLVMDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIK 130
Query: 131 SANIF--LTAEGNSLKLGDFGSAVK---ISAHTTVPGELN-GFVGTQAYMAPEVFMDTNK 184
N L N + + DFG A K S H +P N GT Y + +
Sbjct: 131 PDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLG--- 187
Query: 185 VGHGRAVDIWSLGCVLVEMSSGKRPW 210
+ R D+ SLG VL+ G PW
Sbjct: 188 IEQSRRDDLESLGYVLMYFLRGSLPW 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 69
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + +E T G L+ L + + V++ Q+ A+ L
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 130 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPES-L 185
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 186 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 243
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 244 ELMRA----CWQWNPSDRPSFAEIHQ 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 25/269 (9%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 66
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQ---AYMAPE 177
+ +HRD+ + N L E + +K+ DFG + ++ T G + + APE
Sbjct: 127 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDT-----FTAHAGAKFPIKWTAPE 180
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPE 233
+ NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE
Sbjct: 181 S-LAYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPE 237
Query: 234 SLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+ + +A C + +P+ R + E+ Q
Sbjct: 238 KVYELMRA----CWQWNPSDRPSFAEIHQ 262
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 73
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + +E T G L+ L + + V++ Q+ A+ L
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 134 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 189
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 190 AYNKFSIKS--DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 248 ELMRA----CWQWNPSDRPSFAEIHQ 269
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A + E V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPE----VVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSGK 207
VDIWS+GC++ EM K
Sbjct: 204 ENVDIWSVGCIMGEMVCHK 222
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A + E V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDC-TLKILDFGLARTAGTSFMMEPE----VVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
DIWS+GC++ EM K G
Sbjct: 207 DIWSVGCIMGEMVCHKILFPG 227
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 23/268 (8%)
Query: 2 SSVTFSVSPGQGRFGKVYTA--VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGI 59
S +TF G G+FG V+ +N + VA+K I+ ++ F++ E ++ +
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDK---VAIKTIREGAMSEEDFIE----EAEVMMKL 59
Query: 60 NQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISAL 119
+ LV+ YGV + + + L E G L +++ + + + ++ L
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 119
Query: 120 HENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQ---AYMAP 176
E +++HRD+ + N L E +K+ DFG + + GT+ + +P
Sbjct: 120 EEASVIHRDLAARNC-LVGENQVIKVSDFG-----MTRFVLDDQYTSSTGTKFPVKWASP 173
Query: 177 EVFMDTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESL 235
EVF + + D+WS G ++ E+ S GK P+ E SN +++ + G P
Sbjct: 174 EVFSFSR---YSSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFRLYKPRLA 229
Query: 236 SDEGQAFAELCLRHDPAQRATIFELLQH 263
S C + P R LL+
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQ 257
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 129 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 184
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 185 AYNKFSIKS--DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 243 ELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 73
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 134 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPES-L 189
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 190 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 248 ELMRA----CWQWNPSDRPSFAEIHQ 269
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 21/263 (7%)
Query: 4 VTFSVSPGQGRFGKVYTAVNNETGEL-VAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
+T G G+FG V + G+ VA+K I+ ++ F + E + + ++
Sbjct: 10 ITLLKELGSGQFGVV--KLGKWKGQYDVAVKMIKEGSMSEDEFFQ----EAQTMMKLSHP 63
Query: 63 NLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHEN 122
LVK+YGV + + E + G L + ++S GL + + + ++ L +
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH 123
Query: 123 TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQ---AYMAPEVF 179
+HRD+ + N L +K+ DFG + V VGT+ + APEVF
Sbjct: 124 QFIHRDLAARNC-LVDRDLCVKVSDFGMTRYVLDDQYVSS-----VGTKFPVKWSAPEVF 177
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE 238
+ + D+W+ G ++ E+ S GK P+ Y +N +++ KV G P SD
Sbjct: 178 ---HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY-TNSEVVLKVSQGHRLYRPHLASDT 233
Query: 239 GQAFAELCLRHDPAQRATIFELL 261
C P +R T +LL
Sbjct: 234 IYQIMYSCWHELPEKRPTFQQLL 256
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 129 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 184
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 185 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 243 ELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FGKV Y N+ TGE+VA+K ++ R E+ IL + ++++K
Sbjct: 23 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR--SGWKQEIDILRTLYHEHIIK 80
Query: 67 YYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y G + + + L ME G+L + GL ++L+ + +Q+ + ++ LH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHSQHY 138
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
+HR++ + N+ L + +K+GDFG A + H +G Y APE +
Sbjct: 139 IHRNLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYK 196
Query: 184 KVGHGRAVDIWSLGCVLVEM 203
A D+WS G L E+
Sbjct: 197 FY---YASDVWSFGVTLYEL 213
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 73
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 133
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 134 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 189
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 190 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 248 ELMRA----CWQWNPSDRPSFAEIHQ 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 72
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 133 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 188
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 189 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 246
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 247 ELMRA----CWQWNPSDRPSFAEIHQ 268
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 26/259 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +I++ + LV+ Y V
Sbjct: 18 GNGQFGEVWMGTWNGNTK-VAIKTLKPGTMSPESF----LEEAQIMKKLKHDKLVQLYAV 72
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTED---GLPEVLVRRYTKQLVDAISALHENTIVHR 127
+ E + + E +G+L ++ E LP ++ Q+ ++ + +HR
Sbjct: 73 -VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLV--DMAAQVAAGMAYIERMNYIHR 129
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH 187
D++SANI L G K+ DFG A I + + F + APE + +
Sbjct: 130 DLRSANI-LVGNGLICKIADFGLARLIEDNEXTARQGAKF--PIKWTAPEAAL------Y 180
Query: 188 GRAV---DIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFA 243
GR D+WS G +L E+ + G+ P+ + N +++ +V G P+
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVPYPGMN-NREVLEQVERGYRMPCPQDCPISLHELM 239
Query: 244 ELCLRHDPAQRATIFELLQ 262
C + DP +R T FE LQ
Sbjct: 240 IHCWKKDPEERPT-FEYLQ 257
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 104 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 159 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 211
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 104 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 159 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 211
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 51 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 108
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 109 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 163
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 164 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 216
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 217 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 276
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 277 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 166 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 218
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 219 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 256
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 129 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 184
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 185 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 243 ELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 68
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 129 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 184
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 185 AYNKFSIKS--DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 242
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 243 ELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FGKV Y N+ TGE+VA+K ++ R E+ IL + ++++K
Sbjct: 23 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR--SGWKQEIDILRTLYHEHIIK 80
Query: 67 YYGV--EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y G + + + L ME G+L + GL ++L+ + +Q+ + ++ LH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHAQHY 138
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
+HR++ + N+ L + +K+GDFG A + H +G Y APE +
Sbjct: 139 IHRNLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYK 196
Query: 184 KVGHGRAVDIWSLGCVLVEM 203
A D+WS G L E+
Sbjct: 197 FY---YASDVWSFGVTLYEL 213
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 104 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 159 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 211
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 45 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 103 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 157
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 158 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 210
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 211 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 270
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 271 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 329
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 160 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 212
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 213 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 73
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 134 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 189
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 190 AYNKFSIKS--DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 248 ELMRA----CWQWNPSDRPSFAEIHQ 269
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 104 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 159 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 211
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 120/293 (40%), Gaps = 51/293 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 104 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 159 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 211
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
L S E F + LR+D R T E ++HP+
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 70
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 131 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 186
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 187 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 244
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 245 ELMRA----CWQWNPSDRPSFAEIHQ 266
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 45 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 102
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 103 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 157
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 158 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 210
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 211 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 270
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 271 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 329
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 160 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 212
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 213 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 104 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 159 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 211
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 70
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 131 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 186
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 187 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 244
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 245 ELMRA----CWQWNPSDRPSFAEIHQ 266
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 81
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 82 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 142 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 197
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 198 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 255
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 256 ELMRA----CWQWNPSDRPSFAEIHQ 277
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 44 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 101
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 102 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 156
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 157 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 209
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 210 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 269
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 270 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 159 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 211
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 212 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 249
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 46/305 (15%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGE-----LVAMKEIQLHKQNDARFVKDMLVELRIL 56
+++ F + G G FGKV A G+ VA+K ++ D + + ++ EL+I+
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIM 88
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQ--------------------S 95
+ Q +N+V G H +++ E C G L + ++
Sbjct: 89 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLD 148
Query: 96 TEDGLPEVL--VRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVK 153
EDG P L + ++ Q+ ++ L +HRD+ + N+ LT G+ K+GDFG A
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARD 207
Query: 154 ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAE 212
I + + N + + +MAPE D + D+WS G +L E+ S G P+
Sbjct: 208 IMNDSNYIVKGNARLPVK-WMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLNPYPG 263
Query: 213 Y--DSNYQIMFKVG--MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIV 268
+S + + K G M + P+++ QA C +P R T ++ FL
Sbjct: 264 ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA----CWALEPTHRPTFQQICS--FLQE 317
Query: 269 SCEED 273
+ED
Sbjct: 318 QAQED 322
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 73
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 134 KKNFIHRDLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 189
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 190 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 247
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 248 ELMRA----CWQWNPSDRPSFAEIHQ 269
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 104 PVSRTPALVF-EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 159 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 211
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A + E V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPE----VVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSGK 207
VD+WS+GC++ EM K
Sbjct: 204 ENVDLWSVGCIMGEMVCHK 222
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A + E V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDC-TLKILDFGLARTAGTSFMMEPE----VVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSGKTNLSG 389
D+WS+GC++ EM K G
Sbjct: 207 DLWSVGCIMGEMVCHKILFPG 227
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 51/299 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L
Sbjct: 46 GRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIVKD 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ R ++F E + L Q+ L + +R Y +++ A+ H I+HRD+K
Sbjct: 104 PVSRTPALVF-EHVNNTDFKQLRQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVK 158
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGR 189
N+ + E L+L D+G A PG E N V ++ + PE+ +D +
Sbjct: 159 PHNVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY-- 211
Query: 190 AVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPE 233
++D+WSLGC+L M K P+ NY + ++ + P +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 234 SL--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E F + LR+D R T E ++HP+ ++
Sbjct: 272 ILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 330
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYH-----PGQEYNVRVASRYFKGPELLVDYQMYDY--SL 213
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
D+WSLGC+L M G N +V A+V G+
Sbjct: 214 DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 18/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 22 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I + E F + APE N
Sbjct: 135 LRAANI-LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAI---NYGTFT 188
Query: 189 RAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E LC
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 247
Query: 248 RHDPAQRATIFELLQ 262
+ P R T F+ L+
Sbjct: 248 KERPEDRPT-FDYLR 261
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 44/293 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G +G V A + +VA+K+I L D K +L E+ IL +N ++VK +
Sbjct: 62 GTGSYGHVCEAYDKLEKRVVAIKKI-LRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 71 EIHRE-----EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIV 125
I ++ E+ + +E+ + + L + T L E+ ++ L+ + +H I+
Sbjct: 121 VIPKDVEKFDELYVVLEI-ADSDFKKLFR-TPVYLTELHIKTLLYNLLVGVKYVHSAGIL 178
Query: 126 HRDIKSANIFLTAEGNSLKLGDFGSAVKIS-----------------------AHT-TVP 161
HRD+K AN L + S+K+ DFG A + HT +
Sbjct: 179 HRDLKPANC-LVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLK 237
Query: 162 GELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMF 221
+L G V T+ Y APE+ + + + A+D+WS+GC+ E+ + + Y ++ +F
Sbjct: 238 RQLTGHVVTRWYRAPELIL--LQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLF 295
Query: 222 KVGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEEDV 274
G P P+ + G F + R + Q IF +L P EED+
Sbjct: 296 P-GSSCFPLSPDQKA--GNDF-KFHTRGNRDQLNVIFNILGTP-----SEEDI 339
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 340 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM 380
+L G V T+ Y APE+ + + + A+D+WS+GC+ E+
Sbjct: 239 QLTGHVVTRWYRAPELIL--LQENYTEAIDVWSIGCIFAEL 277
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 22 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I E N + + P + + +G
Sbjct: 135 LRAANI-LVSDTLSCKIADFGLARLI--------EDNEYTAREGAKFPIKWTAPEAINYG 185
Query: 189 RAV---DIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAE 244
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMR 244
Query: 245 LCLRHDPAQRATIFELLQ 262
LC + P R T F+ L+
Sbjct: 245 LCWKERPEDRPT-FDYLR 261
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L + +R Y +L+ A+ H I+HRD+K N+ + E L+L D+G A
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEFY 176
Query: 160 VPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQ 218
PG E N V ++ + PE+ +D + ++D+WSLGC+ M K P+ N+
Sbjct: 177 HPGKEYNVRVASRYFKGPELLVDLQDYDY--SLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 219 IMFKVG--------------------------MGETPTIP----------ESLSDEGQAF 242
+ K+ +G P +S E F
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 294
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ LR+D +R T E + HP+
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYF 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 155 NVMIDHELRKLRLIDWGLA-----EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY--SL 207
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGSGG 401
D+WSLGC+ M G N +V A+V G+ G
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L + +R Y +L+ A+ H I+HRD+K N+ + E L+L D+G A
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEFY 176
Query: 160 VPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQ 218
PG E N V ++ + PE+ +D + ++D+WSLGC+ M K P+ N+
Sbjct: 177 HPGKEYNVRVASRYFKGPELLVDLQDYDY--SLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 219 IMFKVG--------------------------MGETPTIP----------ESLSDEGQAF 242
+ K+ +G P +S E F
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 294
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ LR+D +R T E + HP+
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYF 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 155 NVMIDHELRKLRLIDWGLA-----EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY--SL 207
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGSGG 401
D+WSLGC+ M G N +V A+V G+ G
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 18/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 24 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 78
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 79 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I + E F + APE N
Sbjct: 137 LRAANI-LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAI---NYGTFT 190
Query: 189 RAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E LC
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 249
Query: 248 RHDPAQRATIFELLQ 262
+ P R T F+ L+
Sbjct: 250 KERPEDRPT-FDYLR 263
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L + +R Y +L+ A+ H I+HRD+K N+ + E L+L D+G A
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEFY 178
Query: 160 VPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQ 218
PG E N V ++ + PE+ +D + ++D+WSLGC+ M K P+ N+
Sbjct: 179 HPGKEYNVRVASRYFKGPELLVDLQDYDY--SLDMWSLGCMFAGMIFRKEPFFYGHDNHD 236
Query: 219 IMFKVG--------------------------MGETPTIP----------ESLSDEGQAF 242
+ K+ +G P +S E F
Sbjct: 237 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 296
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ LR+D +R T E + HP+
Sbjct: 297 LDKLLRYDHQERLTALEAMTHPYF 320
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 157 NVMIDHELRKLRLIDWGLA-----EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY--SL 209
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGSGG 401
D+WSLGC+ M G N +V A+V G+ G
Sbjct: 210 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 249
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L + +R Y +L+ A+ H I+HRD+K N+ + E L+L D+G A
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEFY 177
Query: 160 VPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQ 218
PG E N V ++ + PE+ +D + ++D+WSLGC+ M K P+ N+
Sbjct: 178 HPGKEYNVRVASRYFKGPELLVDLQDYDY--SLDMWSLGCMFAGMIFRKEPFFYGHDNHD 235
Query: 219 IMFKVG--------------------------MGETPTIP----------ESLSDEGQAF 242
+ K+ +G P +S E F
Sbjct: 236 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 295
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ LR+D +R T E + HP+
Sbjct: 296 LDKLLRYDHQERLTALEAMTHPYF 319
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 156 NVMIDHELRKLRLIDWGLA-----EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY--SL 208
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGSGG 401
D+WSLGC+ M G N +V A+V G+ G
Sbjct: 209 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 248
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L + +R Y +L+ A+ H I+HRD+K N+ + E L+L D+G A
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEFY 176
Query: 160 VPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQ 218
PG E N V ++ + PE+ +D + ++D+WSLGC+ M K P+ N+
Sbjct: 177 HPGKEYNVRVASRYFKGPELLVDLQDYDY--SLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 219 IMFKVG--------------------------MGETPTIP----------ESLSDEGQAF 242
+ K+ +G P +S E F
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 294
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ LR+D +R T E + HP+
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYF 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 155 NVMIDHELRKLRLIDWGLA-----EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY--SL 207
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGSGG 401
D+WSLGC+ M G N +V A+V G+ G
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L + +R Y +L+ A+ H I+HRD+K N+ + E L+L D+G A
Sbjct: 143 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEFY 197
Query: 160 VPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQ 218
PG E N V ++ + PE+ +D + ++D+WSLGC+ M K P+ N+
Sbjct: 198 HPGKEYNVRVASRYFKGPELLVDLQDYDY--SLDMWSLGCMFAGMIFRKEPFFYGHDNHD 255
Query: 219 IMFKVG--------------------------MGETPTIP----------ESLSDEGQAF 242
+ K+ +G P +S E F
Sbjct: 256 QLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 315
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ LR+D +R T E + HP+
Sbjct: 316 LDKLLRYDHQERLTALEAMTHPYF 339
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 176 NVMIDHELRKLRLIDWGLA-----EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY--SL 228
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGSGG 401
D+WSLGC+ M G N +V A+V G+ G
Sbjct: 229 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 268
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L + +R Y +L+ A+ H I+HRD+K N+ + E L+L D+G A
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEFY 176
Query: 160 VPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQ 218
PG E N V ++ + PE+ +D + ++D+WSLGC+ M K P+ N+
Sbjct: 177 HPGKEYNVRVASRYFKGPELLVDLQDYDY--SLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 219 IMFKVG--------------------------MGETPTIP----------ESLSDEGQAF 242
+ K+ +G P +S E F
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 294
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ LR+D +R T E + HP+
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYF 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 155 NVMIDHELRKLRLIDWGLA-----EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY--SL 207
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGSGG 401
D+WSLGC+ M G N +V A+V G+ G
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L + +R Y +L+ A+ H I+HRD+K N+ + E L+L D+G A
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEFY 177
Query: 160 VPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQ 218
PG E N V ++ + PE+ +D + ++D+WSLGC+ M K P+ N+
Sbjct: 178 HPGKEYNVRVASRYFKGPELLVDLQDYDY--SLDMWSLGCMFAGMIFRKEPFFYGHDNHD 235
Query: 219 IMFKVG--------------------------MGETPTIP----------ESLSDEGQAF 242
+ K+ +G P +S E F
Sbjct: 236 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 295
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ LR+D +R T E + HP+
Sbjct: 296 LDKLLRYDHQERLTALEAMTHPYF 319
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 156 NVMIDHELRKLRLIDWGLA-----EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY--SL 208
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGSGG 401
D+WSLGC+ M G N +V A+V G+ G
Sbjct: 209 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 248
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 17 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 71
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 72 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I E N + + P + + +G
Sbjct: 130 LRAANI-LVSDTLSCKIADFGLARLI--------EDNEYTAREGAKFPIKWTAPEAINYG 180
Query: 189 RAV---DIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAE 244
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMR 239
Query: 245 LCLRHDPAQRATIFELLQ 262
LC + P R T F+ L+
Sbjct: 240 LCWKERPEDRPT-FDYLR 256
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L + +R Y +L+ A+ H I+HRD+K N+ + E L+L D+G A
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEFY 176
Query: 160 VPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQ 218
PG E N V ++ + PE+ +D + ++D+WSLGC+ M K P+ N+
Sbjct: 177 HPGKEYNVRVASRYFKGPELLVDLQDYDY--SLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 219 IMFKVG--------------------------MGETPTIP----------ESLSDEGQAF 242
+ K+ +G P +S E F
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 294
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ LR+D +R T E + HP+
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYF 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 155 NVMIDHELRKLRLIDWGLA-----EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY--SL 207
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGSGG 401
D+WSLGC+ M G N +V A+V G+ G
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 18/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 23 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 77
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 78 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I + E F + APE N
Sbjct: 136 LRAANI-LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAI---NYGTFT 189
Query: 189 RAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E LC
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 248
Query: 248 RHDPAQRATIFELLQ 262
+ P R T F+ L+
Sbjct: 249 KERPEDRPT-FDYLR 262
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDA-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSG 206
VDIWS+G ++ EM G
Sbjct: 204 ENVDIWSVGVIMGEMIKG 221
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDA-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSG 383
DIWS+G ++ EM G
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 18/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 31 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 85
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 86 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I + E F + APE N
Sbjct: 144 LRAANI-LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAI---NYGTFT 197
Query: 189 RAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E LC
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 256
Query: 248 RHDPAQRATIFELLQ 262
+ P R T F+ L+
Sbjct: 257 KERPEDRPT-FDYLR 270
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 28 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 82
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 83 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I E N + + P + + +G
Sbjct: 141 LRAANI-LVSDTLSCKIADFGLARLI--------EDNEYTAREGAKFPIKWTAPEAINYG 191
Query: 189 RAV---DIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAE 244
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMR 250
Query: 245 LCLRHDPAQRATIFELLQ 262
LC + P R T F+ L+
Sbjct: 251 LCWKERPEDRPT-FDYLR 267
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 32 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 86
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 87 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I E N + + P + + +G
Sbjct: 145 LRAANI-LVSDTLSCKIADFGLARLI--------EDNEYTAREGAKFPIKWTAPEAINYG 195
Query: 189 RAV---DIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAE 244
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMR 254
Query: 245 LCLRHDPAQRATIFELLQ 262
LC + P R T F+ L+
Sbjct: 255 LCWKERPEDRPT-FDYLR 271
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 49/298 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L+
Sbjct: 47 GRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLR--GGTNIIKLIDTVKD 104
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ++F E + L Q L + +R Y +L+ A+ H I+HRD+K
Sbjct: 105 PVSKTPALVF-EYINNTDFKQLYQI----LTDFDIRFYMYELLKALDYCHSKGIMHRDVK 159
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + + L+L D+G ++ E N V ++ + PE+ +D + +
Sbjct: 160 PHNVMIDHQQKKLRLIDWG----LAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDY--S 213
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPES 234
+D+WSLGC+L M + P+ NY + ++ + P +
Sbjct: 214 LDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDI 273
Query: 235 L--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E + LR+D QR T E ++HP+ +E
Sbjct: 274 LGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKE 331
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + + L+L D+G ++ E N V ++ + PE+ +D + ++D
Sbjct: 162 NVMIDHQQKKLRLIDWG----LAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDY--SLD 215
Query: 370 IWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
+WSLGC+L M G+ N +V A+V G+
Sbjct: 216 MWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 252
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 44/204 (21%)
Query: 100 LPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT 159
L + +R Y +L+ A+ H I+HRD+K N+ + E L+L D+G A
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWG-----LAEFY 176
Query: 160 VPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQ 218
PG E N V ++ + PE+ +D + ++D+WSLGC+ M K P+ N+
Sbjct: 177 HPGKEYNVRVASRYFKGPELLVDLQDYDY--SLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
Query: 219 IMFKVG--------------------------MGETPTIP----------ESLSDEGQAF 242
+ K+ +G P +S E F
Sbjct: 235 QLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDF 294
Query: 243 AELCLRHDPAQRATIFELLQHPFL 266
+ LR+D +R T E + HP+
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYF 318
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPG-ELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
N+ + E L+L D+G A PG E N V ++ + PE+ +D + ++
Sbjct: 155 NVMIDHELRKLRLIDWGLA-----EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY--SL 207
Query: 369 DIWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGSGG 401
D+WSLGC+ M G N +V A+V G+ G
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 27 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 81
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 82 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I E N + + P + + +G
Sbjct: 140 LRAANI-LVSDTLSCKIADFGLARLI--------EDNEYTAREGAKFPIKWTAPEAINYG 190
Query: 189 RAV---DIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAE 244
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMR 249
Query: 245 LCLRHDPAQRATIFELLQ 262
LC + P R T F+ L+
Sbjct: 250 LCWKERPEDRPT-FDYLR 266
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 32/283 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHK-QNDARFVKDMLVELRILEGINQKNLVKYYG 69
G+G + KV AV+ + G+ A+K I+ + +R +++ + N L++++
Sbjct: 22 GEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFE 81
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ L E G++ + +Q + E R + + A+ LH I HRD+
Sbjct: 82 DDTR---FYLVFEKLQGGSILAHIQK-QKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 130 KSANIFLTA--EGNSLKLGDF--GSAVKISAHTT--VPGELNGFVGTQAYMAP---EVFM 180
K NI + + + +K+ DF GS +K++ T EL G+ YMAP EVF
Sbjct: 138 KPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFT 197
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEY---DSNY----------QIMFKVGMGE 227
D + + D+WSLG VL M SG P+ + D + +F+
Sbjct: 198 DQATF-YDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG 256
Query: 228 TPTIPES----LSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
P+ +S E + L D QR + ++LQHP++
Sbjct: 257 KYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 324 DFGSAVKISAHTT--VPGELNGFVGTQAYMAPEV---FMDTNKVGHGRAVDIWSLGCVLV 378
D GS +K++ T EL G+ YMAPEV F D + + D+WSLG VL
Sbjct: 159 DLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATF-YDKRCDLWSLGVVLY 217
Query: 379 EMSSG 383
M SG
Sbjct: 218 IMLSG 222
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 18/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 30 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 84
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 85 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I + E F + APE N
Sbjct: 143 LRAANI-LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAI---NYGTFT 196
Query: 189 RAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E LC
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 255
Query: 248 RHDPAQRATIFELLQ 262
+ P R T F+ L+
Sbjct: 256 KERPEDRPT-FDYLR 269
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 18/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 22 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I + E F + APE N
Sbjct: 135 LRAANI-LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAI---NYGTFT 188
Query: 189 RAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E LC
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 247
Query: 248 RHDPAQRATIFELLQ 262
+ P R T F+ L+
Sbjct: 248 KERPEDRPT-FDYLR 261
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FGKV Y N+ TGE+VA+K ++ + + E+ IL + +++VK
Sbjct: 18 GEGHFGKVSLYCYDPTNDGTGEMVAVKALK--EGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 67 YYGV-EIHREEMV-LFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y G E E+ V L ME G+L + GL ++L+ + +Q+ + ++ LH
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL--FAQQICEGMAYLHAQHY 133
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
+HR + + N+ L + +K+GDFG A + H +G Y APE +
Sbjct: 134 IHRALAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECK 191
Query: 184 KVGHGRAVDIWSLGCVLVEM 203
A D+WS G L E+
Sbjct: 192 FY---YASDVWSFGVTLYEL 208
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 49/298 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G++ +V+ A+N E V +K ++ K+ + +L LR G N L+
Sbjct: 52 GRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLR--GGTNIIKLIDTVKD 109
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
+ + ++F E + L Q L + +R Y +L+ A+ H I+HRD+K
Sbjct: 110 PVSKTPALVF-EYINNTDFKQLYQI----LTDFDIRFYMYELLKALDYCHSKGIMHRDVK 164
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
N+ + + L+L D+G ++ E N V ++ + PE+ +D + +
Sbjct: 165 PHNVMIDHQQKKLRLIDWG----LAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDY--S 218
Query: 191 VDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVG----------------MGETPTIPES 234
+D+WSLGC+L M + P+ NY + ++ + P +
Sbjct: 219 LDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDI 278
Query: 235 L--------------------SDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
L S E + LR+D QR T E ++HP+ +E
Sbjct: 279 LGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKE 336
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVD 369
N+ + + L+L D+G ++ E N V ++ + PE+ +D + ++D
Sbjct: 167 NVMIDHQQKKLRLIDWG----LAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDY--SLD 220
Query: 370 IWSLGCVLVEM-------SSGKTNLSGVVVSAEVFGS 399
+WSLGC+L M G+ N +V A+V G+
Sbjct: 221 MWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 257
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G G V A + VA+K++ QN K EL +++ +N KN++ V
Sbjct: 33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 71 EIHREEMVLFME--LCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
++ + F + + E +L Q + L + Q++ I LH I+HRD
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRD 151
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+K +NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+
Sbjct: 152 LKPSNIVVKSDA-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYK 203
Query: 189 RAVDIWSLGCVLVEMSSG 206
VDIWS+G ++ EM G
Sbjct: 204 ENVDIWSVGVIMGEMIKG 221
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
+NI + ++ +LK+ DFG A +A T+ + +V T+ Y APEV + +G+ V
Sbjct: 155 SNIVVKSDA-TLKILDFGLAR--TAGTSF--MMTPYVVTRYYRAPEVILG---MGYKENV 206
Query: 369 DIWSLGCVLVEMSSG 383
DIWS+G ++ EM G
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 17/165 (10%)
Query: 51 VELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQ---STEDGLPEVLVRR 107
V++R ++ + KN V + + + M+LC + L+ + S ED V +
Sbjct: 110 VKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHI 169
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAH-------TTV 160
+ Q+ +A+ LH ++HRD+K +NIF T + + +K+GDFG + T +
Sbjct: 170 FI-QIAEAVEFLHSKGLMHRDLKPSNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPM 227
Query: 161 PGELN--GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM 203
P G VGT+ YM+PE N + VDI+SLG +L E+
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGNN---YSHKVDIFSLGLILFEL 269
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAH-------TTVPGELN--GFVGTQAYMAPEVFMDT 359
+NIF T + + +K+GDFG + T +P G VGT+ YM+PE
Sbjct: 193 SNIFFTMD-DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN 251
Query: 360 NKVGHGRAVDIWSLGCVLVE-MSSGKTNLSGVVVSAEV 396
N + VDI+SLG +L E + S T + V + +V
Sbjct: 252 N---YSHKVDIFSLGLILFELLYSFSTQMERVRIITDV 286
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 50/273 (18%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
G G GKV N T E A+K +Q + + +++ + R + + +V Y
Sbjct: 27 GLGINGKVLQIFNKRTQEKFALKMLQ----DCPKARREVELHWRASQCPHIVRIVDVYEN 82
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTED-GLPEVLVRRYTKQLVDAISALHENTIVHRD 128
+ R+ +++ ME G L S +Q D E K + +AI LH I HRD
Sbjct: 83 LYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 129 IKSANIFLTAEGNS--LKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
+K N+ T++ + LKL DFG A +T
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFA----------------------------KETTGEK 174
Query: 187 HGRAVDIWSLGCVLVEMSSGKRPWAEYDSNY--------QIMFKVGMGETPTIPE--SLS 236
+ ++ D+WSLG ++ + G P + SN+ + ++G E P PE +S
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPP---FYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVS 230
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQHPFLIVS 269
+E + L+ +P QR TI E + HP+++ S
Sbjct: 231 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 11 GQGRFGKV----YTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G+G FGKV Y N+ TGE+VA+K ++ + + E+ IL + +++VK
Sbjct: 17 GEGHFGKVSLYCYDPTNDGTGEMVAVKALK--EGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 67 YYGV-EIHREEMV-LFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTI 124
Y G E E+ V L ME G+L + GL ++L+ + +Q+ + ++ LH
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL--FAQQICEGMAYLHAQHY 132
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKI-SAHTTVPGELNGFVGTQAYMAPEVFMDTN 183
+HR + + N+ L + +K+GDFG A + H +G Y APE +
Sbjct: 133 IHRALAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECK 190
Query: 184 KVGHGRAVDIWSLGCVLVEM 203
A D+WS G L E+
Sbjct: 191 FY---YASDVWSFGVTLYEL 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 18/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 28 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 82
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 83 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I + E F + APE N
Sbjct: 141 LRAANI-LVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAI---NYGTFT 194
Query: 189 RAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E LC
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 253
Query: 248 RHDPAQRATIFELLQ 262
+ P R T F+ L+
Sbjct: 254 KERPEDRPT-FDYLR 267
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 39/298 (13%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGE-----LVAMKEIQLHKQNDARFVKDMLVELRIL 56
+++ F + G G FGKV A G+ VA+K ++ D + + ++ EL+I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIM 103
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQ---------------STEDGL 100
+ Q +N+V G H +++ E C G L + ++ + E+ L
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQL 163
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
+ ++ Q+ ++ L +HRD+ + N+ LT G+ K+GDFG A I +
Sbjct: 164 SSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNY 222
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEY--DSNY 217
+ N + + +MAPE D + D+WS G +L E+ S G P+ +S +
Sbjct: 223 IVKGNARLPVK-WMAPESIFD---CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 278
Query: 218 QIMFKVG--MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
+ K G M + P+++ QA C +P R T ++ FL +ED
Sbjct: 279 YKLVKDGYQMAQPAFAPKNIYSIMQA----CWALEPTHRPTFQQICS--FLQEQAQED 330
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY-G 69
+G F VY A + +G A+K + +++ R + + ++ L G N+V++
Sbjct: 37 AEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSG--HPNIVQFCSA 94
Query: 70 VEIHREE-------MVLFMELCTEGTLESLVQSTEDG-LPEVLVRRYTKQLVDAISALHE 121
I +EE +L ELC +E L + G L V + Q A+ +H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 122 NT--IVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHT--TVPGELNGFV-------GT 170
I+HRD+K N+ L+ +G ++KL DFGSA IS + + + V T
Sbjct: 155 QKPPIIHRDLKVENLLLSNQG-TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 171 QAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAE 212
Y PE+ + G DIW+LGC+L + + P+ +
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 296 PPMSEDSVKVYARANIFLTAEGNSLKLGDFGSAVKISAHT--TVPGELNGFV-------G 346
PP+ +KV N+ L+ +G ++KL DFGSA IS + + + V
Sbjct: 157 PPIIHRDLKV---ENLLLSNQG-TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 347 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVL 377
T Y PE+ + G DIW+LGC+L
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 29/241 (12%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
+GRFG V+ A + VA+K L + + +++ G+ +NL+++
Sbjct: 24 ARGRFGCVWKA--QLMNDFVAVKIFPLQDKQSWQSEREIFS----TPGMKHENLLQFIAA 77
Query: 71 EIHRE----EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHEN---- 122
E E+ L +G+L ++ E+ + + +S LHE+
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELC--HVAETMSRGLSYLHEDVPWC 135
Query: 123 -------TIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMA 175
+I HRD KS N+ L ++ ++ L DFG AV+ PG+ +G VGT+ YMA
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKP-PGDTHGQVGTRRYMA 193
Query: 176 PEVF---MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIP 232
PEV ++ + R +D++++G VL E+ S + Y + F+ +G+ P++
Sbjct: 194 PEVLEGAINFQRDAFLR-IDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLE 252
Query: 233 E 233
E
Sbjct: 253 E 253
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 306 YARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF---MDTNKV 362
+ N+ L ++ ++ L DFG AV+ PG+ +G VGT+ YMAPEV ++ +
Sbjct: 149 FKSKNVLLKSDLTAV-LADFGLAVRFEPGKP-PGDTHGQVGTRRYMAPEVLEGAINFQRD 206
Query: 363 GHGRAVDIWSLGCVLVEMSS 382
R +D++++G VL E+ S
Sbjct: 207 AFLR-IDMYAMGLVLWELVS 225
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 275
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HR++ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 336 KKNFIHRNLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 391
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 392 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 449
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 450 ELMRA----CWQWNPSDRPSFAEIHQ 471
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 37/279 (13%)
Query: 11 GQGRFGKVYTA----VNNETG-ELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G FGKV A + G VA+K L + ++D+L E +L+ +N +++
Sbjct: 32 GEGEFGKVVKATAFHLKGRAGYTTVAVK--MLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRR------------------ 107
K YG ++L +E G+L ++ + P L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 108 -----YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPG 162
+ Q+ + L E ++VHRD+ + NI L AEG +K+ DFG + + +
Sbjct: 150 GDLISFAWQISQGMQYLAEMSLVHRDLAARNI-LVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 163 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMF 221
G + + +MA E D D+WS G +L E+ + G P+ ++
Sbjct: 209 RSQGRIPVK-WMAIESLFDHIYTTQS---DVWSFGVLLWEIVTLGGNPYPGIPPE-RLFN 263
Query: 222 KVGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFEL 260
+ G P++ S+E C + +P +R ++
Sbjct: 264 LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 259 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 314
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HR++ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 375 KKNFIHRNLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 430
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 431 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 488
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 489 ELMRA----CWQWNPSDRPSFAEIHQ 510
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 116/277 (41%), Gaps = 34/277 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 38 GRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 92
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL----PEVLVR---------R 107
N+V G +++ +E C G L + ++S + PE L +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGF 167
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 168 VGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMG 226
+ + +MAPE D D+WS G +L E+ S G P+ + + ++ G
Sbjct: 212 LPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 227 ETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
P+ + E C +P+QR T EL++H
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 217 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 272
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E T G L+ L + + V++ Q+ A+ L
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFM 180
+ +HR++ + N L E + +K+ DFG + ++ T F + APE +
Sbjct: 333 KKNFIHRNLAARNC-LVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPES-L 388
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSN--YQIMFKVGMGETPT-IPESLS 236
NK D+W+ G +L E+++ G P+ D + Y+++ K E P PE +
Sbjct: 389 AYNKF--SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY 446
Query: 237 DEGQAFAELCLRHDPAQRATIFELLQ 262
+ +A C + +P+ R + E+ Q
Sbjct: 447 ELMRA----CWQWNPSDRPSFAEIHQ 468
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+FG+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 18 GAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 72
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HR+
Sbjct: 73 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I E N + + P + + +G
Sbjct: 131 LRAANI-LVSDTLSCKIADFGLARLI--------EDNEYTAREGAKFPIKWTAPEAINYG 181
Query: 189 RAV---DIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAE 244
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMR 240
Query: 245 LCLRHDPAQRATIFELLQ 262
LC + P R T F+ L+
Sbjct: 241 LCWKERPEDRPT-FDYLR 257
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 11 GQGRFGKVYTA----VNNETG-ELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G FGKV A + G VA+K L + ++D+L E +L+ +N +++
Sbjct: 32 GEGEFGKVVKATAFHLKGRAGYTTVAVK--MLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRR------------------ 107
K YG ++L +E G+L ++ + P L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 108 -----YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPG 162
+ Q+ + L E +VHRD+ + NI L AEG +K+ DFG + + +
Sbjct: 150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNI-LVAEGRKMKISDFGLSRDVYEEDSYVK 208
Query: 163 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMF 221
G + + +MA E D D+WS G +L E+ + G P+ ++
Sbjct: 209 RSQGRIPVK-WMAIESLFDHIYTTQS---DVWSFGVLLWEIVTLGGNPYPGIPPE-RLFN 263
Query: 222 KVGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFEL 260
+ G P++ S+E C + +P +R ++
Sbjct: 264 LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 113/279 (40%), Gaps = 37/279 (13%)
Query: 11 GQGRFGKVYTA----VNNETG-ELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G FGKV A + G VA+K L + ++D+L E +L+ +N +++
Sbjct: 32 GEGEFGKVVKATAFHLKGRAGYTTVAVK--MLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRR------------------ 107
K YG ++L +E G+L ++ + P L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 108 -----YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPG 162
+ Q+ + L E +VHRD+ + NI L AEG +K+ DFG + + +
Sbjct: 150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNI-LVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 163 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMF 221
G + + +MA E D D+WS G +L E+ + G P+ ++
Sbjct: 209 RSQGRIPVK-WMAIESLFDHIYTTQS---DVWSFGVLLWEIVTLGGNPYPGIPPE-RLFN 263
Query: 222 KVGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFEL 260
+ G P++ S+E C + +P +R ++
Sbjct: 264 LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 130/296 (43%), Gaps = 37/296 (12%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGE-----LVAMKEIQLHKQNDARFVKDMLVELRIL 56
+++ F + G G FGKV A G+ VA+K ++ D + + ++ EL+I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIM 103
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTL------ESLVQSTEDGLP---EVLVR 106
+ Q +N+V G H +++ E C G L +S V T+ L
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLST 163
Query: 107 R----YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPG 162
R ++ Q+ ++ L +HRD+ + N+ LT G+ K+GDFG A I +
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIV 222
Query: 163 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEY--DSNYQI 219
+ N + + +MAPE D + D+WS G +L E+ S G P+ +S +
Sbjct: 223 KGNARLPVK-WMAPESIFD---CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 220 MFKVG--MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
+ K G M + P+++ QA C +P R T ++ FL +ED
Sbjct: 279 LVKDGYQMAQPAFAPKNIYSIMQA----CWALEPTHRPTFQQICS--FLQEQAQED 328
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 116/285 (40%), Gaps = 48/285 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ------LHKQNDARFVKDMLVELRILEGINQ-KN 63
G G FG V+ V G + A+K + + +QN R V V + Q +
Sbjct: 18 GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV-------LGQHSH 70
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE---DGLPEVLVRRYTKQLVDAISALH 120
+V+Y+ + M++ E C G+L + E ++ Q+ + +H
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
Query: 121 ENTIVHRDIKSANIFLTA---------EGNS---------LKLGDFGSAVKISAHTTVPG 162
++VH DIK +NIF++ EG+ K+GD G +IS+ G
Sbjct: 131 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEG 190
Query: 163 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFK 222
+ ++A EV + H DI++L +V ++G P + +
Sbjct: 191 D-------SRFLANEVLQEN--YTHLPKADIFALALTVV-CAAGAEPLPRNGDQWH---E 237
Query: 223 VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
+ G P IP+ LS E ++ + DP +R + L++H L+
Sbjct: 238 IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 282
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 37/296 (12%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGE-----LVAMKEIQLHKQNDARFVKDMLVELRIL 56
+++ F + G G FGKV A G+ VA+K ++ D + + ++ EL+I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIM 103
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL---PEVLVR------ 106
+ Q +N+V G H +++ E C G L + ++ L P +
Sbjct: 104 SHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAST 163
Query: 107 ----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPG 162
++ Q+ ++ L +HRD+ + N+ LT G+ K+GDFG A I +
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIV 222
Query: 163 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEY--DSNYQI 219
+ N + + +MAPE D + D+WS G +L E+ S G P+ +S +
Sbjct: 223 KGNARLPVK-WMAPESIFD---CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 278
Query: 220 MFKVG--MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEED 273
+ K G M + P+++ QA C +P R T ++ FL +ED
Sbjct: 279 LVKDGYQMAQPAFAPKNIYSIMQA----CWALEPTHRPTFQQICS--FLQEQAQED 328
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ------LHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG V+ V G + A+K + + +QN R V V + ++
Sbjct: 20 GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ------HSHV 73
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE---DGLPEVLVRRYTKQLVDAISALHE 121
V+Y+ + M++ E C G+L + E ++ Q+ + +H
Sbjct: 74 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 122 NTIVHRDIKSANIFLTA---------EGNS---------LKLGDFGSAVKISAHTTVPGE 163
++VH DIK +NIF++ EG+ K+GD G +IS+ G+
Sbjct: 134 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGD 193
Query: 164 LNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKV 223
++A EV + H DI++L +V ++G P + ++
Sbjct: 194 -------SRFLANEVLQEN--YTHLPKADIFALALTVV-CAAGAEPLPRNGDQWH---EI 240
Query: 224 GMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
G P IP+ LS E ++ + DP +R + L++H L+
Sbjct: 241 RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 284
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 81
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL------PEVLVRR------- 107
N+V G +++ +E C G L + ++S + PE L +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 108 --YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN 165
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVG 224
+ + +MAPE D D+WS G +L E+ S G P+ + + ++
Sbjct: 201 ARLPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
G P+ + E C +P+QR T EL++H
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 35/278 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 37 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 91
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL-----PEVLVRR-------- 107
N+V G +++ +E C G L + ++S + PE L +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 108 -YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNG 166
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 167 FVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGM 225
+ + +MAPE D D+WS G +L E+ S G P+ + + ++
Sbjct: 211 RLPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
Query: 226 GETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
G P+ + E C +P+QR T EL++H
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ------LHKQNDARFVKDMLVELRILEGINQKNL 64
G G FG V+ V G + A+K + + +QN R V V + ++
Sbjct: 16 GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ------HSHV 69
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE---DGLPEVLVRRYTKQLVDAISALHE 121
V+Y+ + M++ E C G+L + E ++ Q+ + +H
Sbjct: 70 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 129
Query: 122 NTIVHRDIKSANIFLT---------AEGNS---------LKLGDFGSAVKISAHTTVPGE 163
++VH DIK +NIF++ EG+ K+GD G +IS+ G+
Sbjct: 130 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGD 189
Query: 164 LNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKV 223
++A EV + H DI++L +V ++G P + ++
Sbjct: 190 -------SRFLANEVLQEN--YTHLPKADIFALALTVV-XAAGAEPLPRNGDQWH---EI 236
Query: 224 GMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
G P IP+ LS E ++ + DP +R + L++H L+
Sbjct: 237 RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 280
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 116/285 (40%), Gaps = 48/285 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ------LHKQNDARFVKDMLVELRILEGINQ-KN 63
G G FG V+ V G + A+K + + +QN R V V + Q +
Sbjct: 18 GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV-------LGQHSH 70
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE---DGLPEVLVRRYTKQLVDAISALH 120
+V+Y+ + M++ E C G+L + E ++ Q+ + +H
Sbjct: 71 VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH 130
Query: 121 ENTIVHRDIKSANIFLT---------AEGNS---------LKLGDFGSAVKISAHTTVPG 162
++VH DIK +NIF++ EG+ K+GD G +IS+ G
Sbjct: 131 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEG 190
Query: 163 ELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFK 222
+ ++A EV + H DI++L +V ++G P + +
Sbjct: 191 D-------SRFLANEVLQEN--YTHLPKADIFALALTVV-CAAGAEPLPRNGDQWH---E 237
Query: 223 VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLI 267
+ G P IP+ LS E ++ + DP +R + L++H L+
Sbjct: 238 IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 282
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 90
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL------PEVLVRR------- 107
N+V G +++ +E C G L + ++S + PE L +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 108 --YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN 165
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVG 224
+ + +MAPE D D+WS G +L E+ S G P+ + + ++
Sbjct: 210 ARLPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
G P+ + E C +P+QR T EL++H
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 117/240 (48%), Gaps = 28/240 (11%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
+GRFG V+ A E VA+K + Q+ + + E+ L G+ +N++++ G
Sbjct: 33 ARGRFGCVWKA--QLLNEYVAVKIFPI--QDKQSWQNE--YEVYSLPGMKHENILQFIGA 86
Query: 71 EIHREEMVLFMELCT----EGTLESLVQSTEDG------LPEVLVR--RYTKQLVDAISA 118
E + + + L T +G+L +++ + E + R Y + + +
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLK--LGDFGSAVKISAHTTVPGELNGFVGTQAYMAP 176
H+ I HRDIKS N+ L N+L + DFG A+K A + G+ +G VGT+ YMAP
Sbjct: 147 GHKPAISHRDIKSKNVLLK---NNLTACIADFGLALKFEAGKSA-GDTHGQVGTRRYMAP 202
Query: 177 EVF---MDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGMGETPTIPE 233
EV ++ + R +D++++G VL E++S Y + F+ +G+ P++ +
Sbjct: 203 EVLEGAINFQRDAFLR-IDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLED 261
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 322 LGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF---MDTNKVGHGRAVDIWSLGCVLV 378
+ DFG A+K A + G+ +G VGT+ YMAPEV ++ + R +D++++G VL
Sbjct: 172 IADFGLALKFEAGKSA-GDTHGQVGTRRYMAPEVLEGAINFQRDAFLR-IDMYAMGLVLW 229
Query: 379 EMSSGKTNLSGVV 391
E++S T G V
Sbjct: 230 ELASRCTAADGPV 242
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 118/290 (40%), Gaps = 52/290 (17%)
Query: 26 TGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCT 85
TGE V ++ I L ++ V + EL + + N N+V Y I E+ +
Sbjct: 35 TGEYVTVRRINLEACSN-EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 93
Query: 86 EGTLESLVQST-EDGLPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLK 144
G+ + L+ + DG+ E+ + + ++ A+ +H VHR +K+++I ++ +G +
Sbjct: 94 YGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK-VY 152
Query: 145 LGDFGSAVKISAHTTVPGELNGF----VGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVL 200
L S + + +H ++ F V +++PEV + N G+ DI+S+G
Sbjct: 153 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV-LQQNLQGYDAKSDIYSVGITA 211
Query: 201 VEMSSGKRPWAEYDSNYQIMFKVG-----MGETPTIP----------------------- 232
E+++G P+ + + ++ K+ + +T TIP
Sbjct: 212 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTT 271
Query: 233 ----------------ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ S F E CL+ +P R + LL H F
Sbjct: 272 STPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 321
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 118/290 (40%), Gaps = 52/290 (17%)
Query: 26 TGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCT 85
TGE V ++ I L ++ V + EL + + N N+V Y I E+ +
Sbjct: 51 TGEYVTVRRINLEACSN-EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109
Query: 86 EGTLESLVQST-EDGLPEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLK 144
G+ + L+ + DG+ E+ + + ++ A+ +H VHR +K+++I ++ +G +
Sbjct: 110 YGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK-VY 168
Query: 145 LGDFGSAVKISAHTTVPGELNGF----VGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVL 200
L S + + +H ++ F V +++PEV + N G+ DI+S+G
Sbjct: 169 LSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV-LQQNLQGYDAKSDIYSVGITA 227
Query: 201 VEMSSGKRPWAEYDSNYQIMFKVG-----MGETPTIP----------------------- 232
E+++G P+ + + ++ K+ + +T TIP
Sbjct: 228 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTT 287
Query: 233 ----------------ESLSDEGQAFAELCLRHDPAQRATIFELLQHPFL 266
+ S F E CL+ +P R + LL H F
Sbjct: 288 STPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 337
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 36/279 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 81
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL------PEVLVRR------- 107
N+V G +++ E C G L + ++S + PE L +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 108 --YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN 165
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVG 224
+ + +MAPE D D+WS G +L E+ S G P+ + + ++
Sbjct: 201 ARLPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
G P+ + E C +P+QR T EL++H
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 73 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 127
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL------PEVLVRR------- 107
N+V G +++ +E C G L + ++S + PE L +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 108 --YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN 165
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 188 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVG 224
+ + +MAPE D D+WS G +L E+ S G P+ + + ++
Sbjct: 247 ARLPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 302
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
G P+ + E C +P+QR T EL++H
Sbjct: 303 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 90
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL------PEVLVRR------- 107
N+V G +++ +E C G L + ++S + PE L +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 108 --YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN 165
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVG 224
+ + +MAPE D D+WS G +L E+ S G P+ + + ++
Sbjct: 210 ARLPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
G P+ + E C +P+QR T EL++H
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 90
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL------PEVLVRR------- 107
N+V G +++ +E C G L + ++S + PE L +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 108 --YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN 165
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVG 224
+ + +MAPE D D+WS G +L E+ S G P+ + + ++
Sbjct: 210 ARLPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
G P+ + E C +P+QR T EL++H
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 38 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 92
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL------PEVLVRR------- 107
N+V G +++ +E C G L + ++S + PE L +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 108 --YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN 165
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 153 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVG 224
+ + +MAPE D D+WS G +L E+ S G P+ + + ++
Sbjct: 212 ARLPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 267
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
G P+ + E C +P+QR T EL++H
Sbjct: 268 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 15/264 (5%)
Query: 2 SSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ 61
+ +T G G++G+VY V + VA+K + + D V++ L E +++ I
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKH 87
Query: 62 KNLVKYYGVEIHREEMVLFMELCTEGT-LESLVQSTEDGLPEVLVRRYTKQLVDAISALH 120
NLV+ GV + E G L+ L + + + V++ Q+ A+ L
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 121 ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVF- 179
+ +HRD+ + N L E + +K+ DFG + ++ T F + APE
Sbjct: 148 KKNFIHRDLAARNC-LVGENHVVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 204
Query: 180 MDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESLSDE 238
+T + D+W+ G +L E+++ G P+ D + Q+ + G PE +
Sbjct: 205 YNTFSI----KSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYDLLEKGYRMEQPEGCPPK 259
Query: 239 GQAFAELCLRHDPAQRATIFELLQ 262
C + PA R + E Q
Sbjct: 260 VYELMRACWKWSPADRPSFAETHQ 283
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 36/279 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 81
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL------PEVLVRR------- 107
N+V G +++ E C G L + ++S + PE L +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 108 --YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN 165
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVG 224
+ + +MAPE D D+WS G +L E+ S G P+ + + ++
Sbjct: 201 ARLPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
G P+ + E C +P+QR T EL++H
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 36/279 (12%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 27 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 81
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQSTEDGL------PEVLVRR------- 107
N+V G +++ E C G L + ++S + PE L +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 108 --YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELN 165
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVG 224
+ + +MAPE D D+WS G +L E+ S G P+ + + ++
Sbjct: 201 ARLPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 225 MGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
G P+ + E C +P+QR T EL++H
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 32/275 (11%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 36 GRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 90
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQST-----------EDGLPEVLVRRYT 109
N+V G +++ +E C G L + ++S +D L + Y+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + + +
Sbjct: 151 FQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +MAPE D D+WS G +L E+ S G P+ + + ++ G
Sbjct: 210 LK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTR 265
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
P+ + E C +P+QR T EL++H
Sbjct: 266 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---------------LHKQNDARFVK-DMLVELR 54
G G F V+ A + VAMK ++ L + NDA K D +
Sbjct: 28 GWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANH 87
Query: 55 ILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVD 114
IL+ ++ N GV + V+ E+ E L + + G+P + V++ +KQL+
Sbjct: 88 ILKLLDHFNHKGPNGVHV-----VMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 142
Query: 115 AISALHENT-IVHRDIKSANIFLTAEGN-----SLKLGDFGSAVKISAHTTVPGELNGFV 168
+ +H I+H DIK N+ + + +K+ D G+A H T +
Sbjct: 143 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT------NSI 196
Query: 169 GTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSG 206
T+ Y +PEV + G DIWS C++ E+ +G
Sbjct: 197 QTREYRSPEVLL---GAPWGCGADIWSTACLIFELITG 231
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 319 SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLV 378
+K+ D G+A H T + T+ Y +PEV + G DIWS C++
Sbjct: 176 QIKIADLGNACWYDEHYT------NSIQTREYRSPEVLLGA---PWGCGADIWSTACLIF 226
Query: 379 EMSSG 383
E+ +G
Sbjct: 227 ELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQ---------------LHKQNDARFVK-DMLVELR 54
G G F V+ A + VAMK ++ L + NDA K D +
Sbjct: 28 GWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANH 87
Query: 55 ILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVD 114
IL+ ++ N GV + V+ E+ E L + + G+P + V++ +KQL+
Sbjct: 88 ILKLLDHFNHKGPNGVHV-----VMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 142
Query: 115 AISALHENT-IVHRDIKSANIFLTAEGN-----SLKLGDFGSAVKISAHTTVPGELNGFV 168
+ +H I+H DIK N+ + + +K+ D G+A H T +
Sbjct: 143 GLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT------NSI 196
Query: 169 GTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSG 206
T+ Y +PEV + G DIWS C++ E+ +G
Sbjct: 197 QTREYRSPEVLL---GAPWGCGADIWSTACLIFELITG 231
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 319 SLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLV 378
+K+ D G+A H T + T+ Y +PEV + G DIWS C++
Sbjct: 176 QIKIADLGNACWYDEHYT------NSIQTREYRSPEVLL---GAPWGCGADIWSTACLIF 226
Query: 379 EMSSG 383
E+ +G
Sbjct: 227 ELITG 231
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 118/292 (40%), Gaps = 41/292 (14%)
Query: 11 GQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLV 65
G+G FG+V+ A + E +VA+K L ++ A D E ++ + N+V
Sbjct: 56 GEGAFGRVFQARAPGLLPYEPFTMVAVK--MLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 66 KYYGVEIHREEMVLFMELCTEGTLESLVQS--------------------TEDGLPEVLV 105
K GV + M L E G L ++S + G P +
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 106 RR---YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPG 162
+Q+ ++ L E VHRD+ + N L E +K+ DFG + I +
Sbjct: 174 AEQLCIARQVAAGMAYLSERKFVHRDLATRNC-LVGENMVVKIADFGLSRNIYSADYYKA 232
Query: 163 ELNGFVGTQAYMAPE-VFMDTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIM 220
+ N + + +M PE +F + + D+W+ G VL E+ S G +P+ ++ +++
Sbjct: 233 DGNDAIPIR-WMPPESIFYNR----YTTESDVWAYGVVLWEIFSYGLQPYYGM-AHEEVI 286
Query: 221 FKVGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQHPFLIVSCEE 272
+ V G PE+ E LC PA R + + H L CE
Sbjct: 287 YYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSI--HRILQRMCER 336
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 127/287 (44%), Gaps = 47/287 (16%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+GR+G+V+ + GE VA+K +A + ++ + +L + +N++ +
Sbjct: 46 GKGRYGEVW--MGKWRGEKVAVK--VFFTTEEASWFRETEIYQTVL--MRHENILGFIAA 99
Query: 71 EIH----REEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH------ 120
+I ++ L + G+L ++ST +L Y+ V + LH
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSS--VSGLCHLHTEIFST 157
Query: 121 --ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPE 177
+ I HRD+KS NI + G + D G AVK IS V N VGT+ YM PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCC-IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 178 VFMDTNKVGHGRA---VDIWSLGCVLVEMS----SG------KRPWAEY---DSNYQIMF 221
V ++ H ++ D++S G +L E++ SG + P+ + D +Y+ M
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMR 276
Query: 222 KVGMGET--PTIP------ESLSDEGQAFAELCLRHDPAQRATIFEL 260
++ + P+ P E L G+ E C H+PA R T +
Sbjct: 277 EIVCIKKLRPSFPNRWSSDECLRQMGKLMTE-CWAHNPASRLTALRV 322
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA- 367
NI + G + D G AVK IS V N VGT+ YM PEV ++ H ++
Sbjct: 172 NILVKKNGTCC-IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSY 230
Query: 368 --VDIWSLGCVLVEMSSGKTNLSGVVV 392
D++S G +L E++ + +SG +V
Sbjct: 231 IMADMYSFGLILWEVA--RRCVSGGIV 255
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 18/255 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G+ G+V+ N + VA+K ++ + F L E +++ + + LV+ Y V
Sbjct: 22 GAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDAF----LAEANLMKQLQHQRLVRLYAV 76
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVR--RYTKQLVDAISALHENTIVHRD 128
+ +E + + E G+L ++ T G+ + + Q+ + ++ + E +HRD
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFLK-TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+++ANI L ++ S K+ DFG A I E F + APE N
Sbjct: 135 LRAANI-LVSDTLSCKIADFGLARLIEDAEXTAREGAKF--PIKWTAPEAI---NYGTFT 188
Query: 189 RAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELCL 247
D+WS G +L E+ + G+ P+ +N +++ + G P++ +E LC
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW 247
Query: 248 RHDPAQRATIFELLQ 262
+ P R T F+ L+
Sbjct: 248 KERPEDRPT-FDYLR 261
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 32/275 (11%)
Query: 11 GQGRFGKVYTA--------VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQK 62
G+G FG+V A T + +KE H ++ A ++ EL+IL I
Sbjct: 36 GRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA-----LMSELKILIHIGHH 90
Query: 63 -NLVKYYGVEIHRE-EMVLFMELCTEGTLESLVQST-------EDGLPEVLVRR----YT 109
N+V G +++ +E C G L + ++S +D + L Y+
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + + +
Sbjct: 151 FQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGET 228
+ +MAPE D D+WS G +L E+ S G P+ + + ++ G
Sbjct: 210 LK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 265
Query: 229 PTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
P+ + E C +P+QR T EL++H
Sbjct: 266 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + +E ++G L +++ + +PE +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYY 213
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 214 KNTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEE 267
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 184 AARNVLVT-ENNVMKIADFGLARDINNIDYYKNTTNGRLPVK-WMAPEALFDR---VYTH 238
Query: 367 AVDIWSLGCVLVEMSS-GKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 269
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + +E ++G L +++ + +PE +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDXX 213
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 214 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEE 267
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 184 AARNVLVT-ENNVMKIADFGLARDINNIDXXKKTTNGRLPVK-WMAPEALFDR---VYTH 238
Query: 367 AVDIWSLGCVLVEM-SSGKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 269
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + +E ++G L +++ + +PE +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDXX 213
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 214 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEE 267
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 184 AARNVLVT-ENNVMKIADFGLARDINNIDXXKKTTNGRLPVK-WMAPEALFDR---VYTH 238
Query: 367 AVDIWSLGCVLVEMSS-GKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 269
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 106/267 (39%), Gaps = 41/267 (15%)
Query: 11 GQGRFGKVYTAVNNETGELV--AMKEIQ-----LHKQNDARFVKDMLVELRILEGINQKN 63
G+G FG VY GE + A IQ L + + + V+ L E ++ G+N N
Sbjct: 30 GKGHFGVVYH------GEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 64 LVKYYGVEIHREEM--VLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHE 121
++ G+ + E + VL +C G L ++S + + + Q+ + L E
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMC-HGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 122 NTIVHRDIKSANIFLTAEGNSLKLGDFGSA----------VKISAHTTVPGELNGFVGTQ 171
VHRD+ + N L E ++K+ DFG A V+ H +P + Q
Sbjct: 143 QKFVHRDLAARNCMLD-ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 172 AYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPT 230
Y T K D+WS G +L E ++ G P+ D + + + G
Sbjct: 202 TYRF------TTKS------DVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQGRRLP 248
Query: 231 IPESLSDEGQAFAELCLRHDPAQRATI 257
PE D + C DPA R T
Sbjct: 249 QPEYCPDSLYQVMQQCWEADPAVRPTF 275
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
Query: 11 GQGRFGKVYTAVNNETGELVAM-------KEIQLHKQNDARFVKDMLVELRILEGINQKN 63
G G FG +Y N +GE VA+ K QLH + ++F K +++G
Sbjct: 18 GSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIE--SKFYK-------MMQGGVGIP 68
Query: 64 LVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENT 123
+K+ G E MV MEL +LE L V Q++ I +H
Sbjct: 69 SIKWCGAEGDYNVMV--MELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 125
Query: 124 IVHRDIKSANIF--LTAEGNSLKLGDFGSAVKI---SAHTTVPGELN-GFVGTQAYMAPE 177
+HRD+K N L +GN + + DFG A K H +P N GT Y +
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASIN 185
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPW 210
+ + R D+ SLG VL+ + G PW
Sbjct: 186 THLG---IEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 21/266 (7%)
Query: 1 MSSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGIN 60
M + + G+G FG V + + G VA+K I+ NDA + L E ++ +
Sbjct: 192 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIK----NDAT-AQAFLAEASVMTQLR 244
Query: 61 QKNLVKYYGVEIHREE-MVLFMELCTEGTLESLVQST-EDGLPEVLVRRYTKQLVDAISA 118
NLV+ GV + + + + E +G+L ++S L + +++ + +A+
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
L N VHRD+ + N+ L +E N K+ DFG K ++ T G+L + APE
Sbjct: 305 LEGNNFVHRDLAARNV-LVSEDNVAKVSDFG-LTKEASSTQDTGKL-----PVKWTAPEA 357
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESLSD 237
+ D+WS G +L E+ S G+ P+ ++ +V G P+
Sbjct: 358 LREKK---FSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPP 413
Query: 238 EGQAFAELCLRHDPAQRATIFELLQH 263
+ C D A R T +L +
Sbjct: 414 AVYDVMKNCWHLDAATRPTFLQLREQ 439
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + +E ++G L +++ + +PE +
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYY 202
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 203 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEE 256
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 257 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 173 AARNVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDR---VYTH 227
Query: 367 AVDIWSLGCVLVEMSS-GKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 228 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 258
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + +E ++G L +++ + +PE +
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYY 213
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 214 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYP--GIPVEE 267
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 184 AARNVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDR---VYTH 238
Query: 367 AVDIWSLGCVLVEMSS-GKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 269
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + +E ++G L +++ + +PE +
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT-ENNVMKIADFGLARDINNIDYY 200
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 201 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEE 254
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 255 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 309 ANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAV 368
A L E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 172 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDR---VYTHQS 227
Query: 369 DIWSLGCVLVEMSS-GKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 228 DVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 256
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + +E ++G L +++ + +PE +
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYY 205
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 206 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYP--GIPVEE 259
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 260 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 176 AARNVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDR---VYTH 230
Query: 367 AVDIWSLGCVLVEMSS-GKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 231 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 261
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 21/266 (7%)
Query: 1 MSSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGIN 60
M + + G+G FG V + + G VA+K I+ NDA + L E ++ +
Sbjct: 11 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIK----NDAT-AQAFLAEASVMTQLR 63
Query: 61 QKNLVKYYGVEIHREE-MVLFMELCTEGTLESLVQST-EDGLPEVLVRRYTKQLVDAISA 118
NLV+ GV + + + + E +G+L ++S L + +++ + +A+
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
L N VHRD+ + N+ L +E N K+ DFG K ++ T G+L + APE
Sbjct: 124 LEGNNFVHRDLAARNV-LVSEDNVAKVSDFG-LTKEASSTQDTGKL-----PVKWTAPEA 176
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESLSD 237
+ D+WS G +L E+ S G+ P+ ++ +V G P+
Sbjct: 177 L---REAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPP 232
Query: 238 EGQAFAELCLRHDPAQRATIFELLQH 263
+ C D A R + +L +
Sbjct: 233 AVYEVMKNCWHLDAAMRPSFLQLREQ 258
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + +E ++G L +++ + +PE +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYY 213
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 214 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYP--GIPVEE 267
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 184 AARNVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDR---VYTH 238
Query: 367 AVDIWSLGCVLVEMSS-GKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 269
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 11 GQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQ-KNL 64
G+G FG+V A ++ E V + L + + D++ E+ +++ I + KN+
Sbjct: 90 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 149
Query: 65 VKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLVR-----RYT 109
+ G + + +E ++G L +++ + +PE + T
Sbjct: 150 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 209
Query: 110 KQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVG 169
QL + L +HRD+ + N+ +T E N +K+ DFG A I+ NG +
Sbjct: 210 YQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLP 268
Query: 170 TQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEM-SSGKRPWAEYDSNYQIMFK-VGMGE 227
+ +MAPE D + D+WS G ++ E+ + G P+ + +FK + G
Sbjct: 269 VK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEELFKLLKEGH 322
Query: 228 TPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
P + ++E C P+QR T +L++
Sbjct: 323 RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 230 AARNVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDR---VYTH 284
Query: 367 AVDIWSLGCVLVEM-SSGKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 285 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 315
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 21/266 (7%)
Query: 1 MSSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGIN 60
M + + G+G FG V + + G VA+K I+ NDA + L E ++ +
Sbjct: 5 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIK----NDAT-AQAFLAEASVMTQLR 57
Query: 61 QKNLVKYYGVEIHREE-MVLFMELCTEGTLESLVQST-EDGLPEVLVRRYTKQLVDAISA 118
NLV+ GV + + + + E +G+L ++S L + +++ + +A+
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
L N VHRD+ + N+ L +E N K+ DFG K ++ T G+L + APE
Sbjct: 118 LEGNNFVHRDLAARNV-LVSEDNVAKVSDFG-LTKEASSTQDTGKL-----PVKWTAPEA 170
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESLSD 237
+ D+WS G +L E+ S G+ P+ ++ +V G P+
Sbjct: 171 LREKK---FSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPP 226
Query: 238 EGQAFAELCLRHDPAQRATIFELLQH 263
+ C D A R + +L +
Sbjct: 227 AVYEVMKNCWHLDAAMRPSFLQLREQ 252
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 119/284 (41%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + D++ E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + +E ++G L +++ + +PE +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYY 213
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 214 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYP--GIPVEE 267
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 184 AARNVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDR---VYTH 238
Query: 367 AVDIWSLGCVLVEMSS-GKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 269
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 21/266 (7%)
Query: 1 MSSVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGIN 60
M + + G+G FG V + + G VA+K I+ NDA + L E ++ +
Sbjct: 20 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIK----NDAT-AQAFLAEASVMTQLR 72
Query: 61 QKNLVKYYGVEIHREE-MVLFMELCTEGTLESLVQST-EDGLPEVLVRRYTKQLVDAISA 118
NLV+ GV + + + + E +G+L ++S L + +++ + +A+
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 119 LHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEV 178
L N VHRD+ + N+ L +E N K+ DFG K ++ T G+L + APE
Sbjct: 133 LEGNNFVHRDLAARNV-LVSEDNVAKVSDFG-LTKEASSTQDTGKL-----PVKWTAPEA 185
Query: 179 FMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMGETPTIPESLSD 237
+ D+WS G +L E+ S G+ P+ ++ +V G P+
Sbjct: 186 LREKK---FSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPP 241
Query: 238 EGQAFAELCLRHDPAQRATIFELLQH 263
+ C D A R + +L +
Sbjct: 242 AVYEVMKNCWHLDAAMRPSFLQLREQ 267
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + +E ++G L +++ + +PE +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +++ DFG A I+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMRIADFGLARDINNIDYY 213
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 214 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYP--GIPVEE 267
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 126/289 (43%), Gaps = 51/289 (17%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+GR+G+V+ + GE VA+K I + + F + L +L +N++ +
Sbjct: 46 GKGRYGEVWRG--SWQGENVAVK-IFSSRDEKSWFRETELYNTVMLR---HENILGFIAS 99
Query: 71 EIHREEMVLFMELCTE----GTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH------ 120
++ + L T G+L +Q T L V R + ++ LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 121 --ENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL----NGFVGTQAYM 174
+ I HRD+KS NI + G + D G AV H+ +L N VGT+ YM
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCC-IADLGLAV---MHSQSTNQLDVGNNPRVGTKRYM 213
Query: 175 APEVFMDTNKV---GHGRAVDIWSLGCVLVE-----MSSG-----KRPWAEY---DSNYQ 218
APEV +T +V + VDIW+ G VL E +S+G K P+ + D +++
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 273
Query: 219 IMFKVGM--GETPTIPES-LSDEG-QAFAEL---CLRHDPAQRATIFEL 260
M KV + P IP SD + A+L C +P+ R T +
Sbjct: 274 DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 322
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL----NGFVGTQAYMAPEVFMDTNKV--- 362
NI + G + D G AV H+ +L N VGT+ YMAPEV +T +V
Sbjct: 172 NILVKKNGQCC-IADLGLAV---MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCF 227
Query: 363 GHGRAVDIWSLGCVLVEMS 381
+ VDIW+ G VL E++
Sbjct: 228 DSYKRVDIWAFGLVLWEVA 246
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 96/237 (40%), Gaps = 7/237 (2%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG V V + + + L + + ++M+ E +I+ ++ +V+ GV
Sbjct: 19 GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 78
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDIK 130
E ++L ME+ G L + + +P V Q+ + L E VHRD+
Sbjct: 79 -CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLA 137
Query: 131 SANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRA 190
+ N+ L + K+ DFG + + A + + + APE N
Sbjct: 138 ARNVLLVNR-HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI---NFRKFSSR 193
Query: 191 VDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLSDEGQAFAELC 246
D+WS G + E +S G++P+ + ++M + G+ P E A C
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDC 249
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 45/286 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+GR+G+V+ + GE VA+K I + + F + L +L N +
Sbjct: 17 GKGRYGEVWRG--SWQGENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH--------E 121
H ++ L G+L +Q T L V R + ++ LH +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 122 NTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL----NGFVGTQAYMAPE 177
I HRD+KS NI + G + D G AV H+ +L N VGT+ YMAPE
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCC-IADLGLAV---MHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 178 VFMDTNKV---GHGRAVDIWSLGCVLVE-----MSSG-----KRPWAEY---DSNYQIMF 221
V +T +V + VDIW+ G VL E +S+G K P+ + D +++ M
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR 247
Query: 222 KVGM--GETPTIPES-LSDEG-QAFAEL---CLRHDPAQRATIFEL 260
KV + P IP SD + A+L C +P+ R T +
Sbjct: 248 KVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL----NGFVGTQAYMAPEVFMDTNKV--- 362
NI + G + D G AV H+ +L N VGT+ YMAPEV +T +V
Sbjct: 143 NILVKKNGQCC-IADLGLAV---MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCF 198
Query: 363 GHGRAVDIWSLGCVLVEMS 381
+ VDIW+ G VL E++
Sbjct: 199 DSYKRVDIWAFGLVLWEVA 217
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 45/286 (15%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+GR+G+V+ + GE VA+K I + + F + L +L N +
Sbjct: 17 GKGRYGEVWRG--SWQGENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 71 EIHRE-EMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALH--------E 121
H ++ L G+L +Q T L V R + ++ LH +
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 122 NTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL----NGFVGTQAYMAPE 177
I HRD+KS NI + G + D G AV H+ +L N VGT+ YMAPE
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCC-IADLGLAV---MHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 178 VFMDTNKV---GHGRAVDIWSLGCVLVE-----MSSG-----KRPWAEY---DSNYQIMF 221
V +T +V + VDIW+ G VL E +S+G K P+ + D +++ M
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMR 247
Query: 222 KVGM--GETPTIPES-LSDEG-QAFAEL---CLRHDPAQRATIFEL 260
KV + P IP SD + A+L C +P+ R T +
Sbjct: 248 KVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 11/79 (13%)
Query: 310 NIFLTAEGNSLKLGDFGSAVKISAHTTVPGEL----NGFVGTQAYMAPEVFMDTNKV--- 362
NI + G + D G AV H+ +L N VGT+ YMAPEV +T +V
Sbjct: 143 NILVKKNGQCC-IADLGLAV---MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCF 198
Query: 363 GHGRAVDIWSLGCVLVEMS 381
+ VDIW+ G VL E++
Sbjct: 199 DSYKRVDIWAFGLVLWEVA 217
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGF 167
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 168 VGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMG 226
+ + +MAPE D D+WS G +L E+ S G P+ + + ++ G
Sbjct: 262 LPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 317
Query: 227 ETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
P+ + E C +P+QR T EL++H
Sbjct: 318 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGF 167
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 168 VGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMG 226
+ + +MAPE D D+WS G +L E+ S G P+ + + ++ G
Sbjct: 255 LPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 310
Query: 227 ETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
P+ + E C +P+QR T EL++H
Sbjct: 311 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 119/284 (41%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + + ++G L +++ + +PE +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYY 213
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 214 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYP--GIPVEE 267
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 184 AARNVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDR---VYTH 238
Query: 367 AVDIWSLGCVLVEMSS-GKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 269
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGF 167
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 168 VGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMG 226
+ + +MAPE D D+WS G +L E+ S G P+ + + ++ G
Sbjct: 264 LPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 319
Query: 227 ETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
P+ + E C +P+QR T EL++H
Sbjct: 320 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGF 167
Y+ Q+ + L +HRD+ + NI L+ E N +K+ DFG A I + +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 168 VGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQIMFKVGMG 226
+ + +MAPE D D+WS G +L E+ S G P+ + + ++ G
Sbjct: 257 LPLK-WMAPETIFDRVYTIQS---DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 312
Query: 227 ETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQH 263
P+ + E C +P+QR T EL++H
Sbjct: 313 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FGKVY G LVA+K ++ + E+ ++ +NL++ G
Sbjct: 39 GRGGFGKVYKG-RLADGXLVAVKRLKEERTQGGEL--QFQTEVEMISMAVHRNLLRLRGF 95
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEV---LVRRYTKQLVDAISALHEN---TI 124
+ E +L G++ S ++ + P + +R ++ LH++ I
Sbjct: 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTT-VPGELNGFVGTQAYMAPEVFMDTN 183
+HRD+K+ANI L E ++ +GDFG A + V + G +G ++APE ++ T
Sbjct: 156 IHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIG---HIAPE-YLSTG 210
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW 210
K D++ G +L+E+ +G+R +
Sbjct: 211 KSSE--KTDVFGYGVMLLELITGQRAF 235
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 12/265 (4%)
Query: 2 SSVTFSVSPGQGRFGKVYTA-VNNETGEL---VAMKEIQLHKQNDARFVKDMLVELRILE 57
S VT G G FG+VY + +G+ VA+K ++ R D L E I+
Sbjct: 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIMG 101
Query: 58 GINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAIS 117
+ N+++ GV + M++ E G L+ ++ + + + + + +
Sbjct: 102 QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMK 161
Query: 118 ALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPE 177
L VHRD+ + NI + + K+ DFG + + +G + APE
Sbjct: 162 YLANMNYVHRDLAARNILVNS-NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE 220
Query: 178 VFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMGETPTIPESLS 236
+ A D+WS G V+ E M+ G+RP+ E SN+++M + G P
Sbjct: 221 AI---SYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-SNHEVMKAINDGFRLPTPMDCP 276
Query: 237 DEGQAFAELCLRHDPAQRATIFELL 261
C + + A+R +++
Sbjct: 277 SAIYQLMMQCWQQERARRPKFADIV 301
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G+G FGKVY G LVA+K ++ + E+ ++ +NL++ G
Sbjct: 47 GRGGFGKVYKG-RLADGTLVAVKRLKEERXQGGEL--QFQTEVEMISMAVHRNLLRLRGF 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEV---LVRRYTKQLVDAISALHEN---TI 124
+ E +L G++ S ++ + P + +R ++ LH++ I
Sbjct: 104 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKIS-AHTTVPGELNGFVGTQAYMAPEVFMDTN 183
+HRD+K+ANI L E ++ +GDFG A + V + G +G ++APE ++ T
Sbjct: 164 IHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIG---HIAPE-YLSTG 218
Query: 184 KVGHGRAVDIWSLGCVLVEMSSGKRPW 210
K D++ G +L+E+ +G+R +
Sbjct: 219 KSSE--KTDVFGYGVMLLELITGQRAF 243
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 119/284 (41%), Gaps = 30/284 (10%)
Query: 2 SSVTFSVSPGQGRFGKVYTAV-----NNETGELVAMKEIQLHKQNDARFVKDMLVELRIL 56
+T G+G FG+V A ++ E V + L + + D++ E+ ++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 57 EGINQ-KNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTE----------DGLPEVLV 105
+ I + KN++ G + + + ++G L +++ + +PE +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 106 R-----RYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTV 160
T QL + L +HRD+ + N+ +T E N +K+ DFG A I+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT-ENNVMKIADFGLARDINNIDYY 213
Query: 161 PGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSS-GKRPWAEYDSNYQI 219
NG + + +MAPE D + D+WS G ++ E+ + G P+ +
Sbjct: 214 KKTTNGRLPVK-WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYP--GIPVEE 267
Query: 220 MFK-VGMGETPTIPESLSDEGQAFAELCLRHDPAQRATIFELLQ 262
+FK + G P + ++E C P+QR T +L++
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 307 ARANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR 366
A N+ +T E N +K+ DFG A I+ NG + + +MAPE D +
Sbjct: 184 AARNVLVT-ENNVMKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDR---VYTH 238
Query: 367 AVDIWSLGCVLVEMSS-GKTNLSGVVVSAEVF 397
D+WS G ++ E+ + G + G+ V E+F
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 269
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQN----DARFVKDMLVE----LR 54
++ S G+GRFG+V+ GE VA+K ++ +A + +++ L
Sbjct: 7 TIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 64
Query: 55 ILEGINQKN--LVKYYGVEIHREEMVLFMEL-----CTEGTLESLVQSTEDGLPEVLVRR 107
+ N+ N + + V + E LF L EG ++ L ST GL + +
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHM-- 121
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNG 166
+ + + I HRD+KS NI + G + D G AV+ SA T+ N
Sbjct: 122 ------EIVGTQGKPAIAHRDLKSKNILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNH 174
Query: 167 FVGTQAYMAPEVFMDTNKVGH---GRAVDIWSLGCVLVEMS 204
VGT+ YMAPEV D+ + H + DI+++G V E++
Sbjct: 175 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH---G 365
NI + G + D G AV+ SA T+ N VGT+ YMAPEV D+ + H
Sbjct: 141 NILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 199
Query: 366 RAVDIWSLGCVLVEMSSGKTNLSGV 390
+ DI+++G V E++ + ++ G+
Sbjct: 200 KRADIYAMGLVFWEIAR-RCSIGGI 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQN----DARFVKDMLVE----LR 54
++ S G+GRFG+V+ GE VA+K ++ +A + +++ L
Sbjct: 5 TIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 62
Query: 55 ILEGINQKN--LVKYYGVEIHREEMVLFMEL-----CTEGTLESLVQSTEDGLPEVLVRR 107
+ N+ N + + V + E LF L EG ++ L ST GL + +
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHM-- 119
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNG 166
+ + + I HRD+KS NI + G + D G AV+ SA T+ N
Sbjct: 120 ------EIVGTQGKPAIAHRDLKSKNILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNH 172
Query: 167 FVGTQAYMAPEVFMDTNKVGH---GRAVDIWSLGCVLVEMS 204
VGT+ YMAPEV D+ + H + DI+++G V E++
Sbjct: 173 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH---G 365
NI + G + D G AV+ SA T+ N VGT+ YMAPEV D+ + H
Sbjct: 139 NILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 197
Query: 366 RAVDIWSLGCVLVEMSSGKTNLSGV 390
+ DI+++G V E++ + ++ G+
Sbjct: 198 KRADIYAMGLVFWEIAR-RCSIGGI 221
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQN----DARFVKDMLVE----LR 54
++ S G+GRFG+V+ GE VA+K ++ +A + +++ L
Sbjct: 30 TIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 87
Query: 55 ILEGINQKN--LVKYYGVEIHREEMVLFMEL-----CTEGTLESLVQSTEDGLPEVLVRR 107
+ N+ N + + V + E LF L EG ++ L ST GL + +
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHM-- 144
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNG 166
+ + + I HRD+KS NI + G + D G AV+ SA T+ N
Sbjct: 145 ------EIVGTQGKPAIAHRDLKSKNILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNH 197
Query: 167 FVGTQAYMAPEVFMDTNKVGH---GRAVDIWSLGCVLVEMS 204
VGT+ YMAPEV D+ + H + DI+++G V E++
Sbjct: 198 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH---G 365
NI + G + D G AV+ SA T+ N VGT+ YMAPEV D+ + H
Sbjct: 164 NILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 222
Query: 366 RAVDIWSLGCVLVEMSSGKTNLSGV 390
+ DI+++G V E++ + ++ G+
Sbjct: 223 KRADIYAMGLVFWEIAR-RCSIGGI 246
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQN----DARFVKDMLVE----LR 54
++ S G+GRFG+V+ GE VA+K ++ +A + +++ L
Sbjct: 4 TIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 61
Query: 55 ILEGINQKN--LVKYYGVEIHREEMVLFMEL-----CTEGTLESLVQSTEDGLPEVLVRR 107
+ N+ N + + V + E LF L EG ++ L ST GL + +
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHM-- 118
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNG 166
+ + + I HRD+KS NI + G + D G AV+ SA T+ N
Sbjct: 119 ------EIVGTQGKPAIAHRDLKSKNILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNH 171
Query: 167 FVGTQAYMAPEVFMDTNKVGH---GRAVDIWSLGCVLVEMS 204
VGT+ YMAPEV D+ + H + DI+++G V E++
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH---G 365
NI + G + D G AV+ SA T+ N VGT+ YMAPEV D+ + H
Sbjct: 138 NILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 196
Query: 366 RAVDIWSLGCVLVEMSSGKTNLSGV 390
+ DI+++G V E++ + ++ G+
Sbjct: 197 KRADIYAMGLVFWEIAR-RCSIGGI 220
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQN----DARFVKDMLVE----LR 54
++ S G+GRFG+V+ GE VA+K ++ +A + +++ L
Sbjct: 10 TIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 67
Query: 55 ILEGINQKN--LVKYYGVEIHREEMVLFMEL-----CTEGTLESLVQSTEDGLPEVLVRR 107
+ N+ N + + V + E LF L EG ++ L ST GL + +
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHM-- 124
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNG 166
+ + + I HRD+KS NI + G + D G AV+ SA T+ N
Sbjct: 125 ------EIVGTQGKPAIAHRDLKSKNILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNH 177
Query: 167 FVGTQAYMAPEVFMDTNKVGH---GRAVDIWSLGCVLVEMS 204
VGT+ YMAPEV D+ + H + DI+++G V E++
Sbjct: 178 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH---G 365
NI + G + D G AV+ SA T+ N VGT+ YMAPEV D+ + H
Sbjct: 144 NILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 202
Query: 366 RAVDIWSLGCVLVEMSSGKTNLSGV 390
+ DI+++G V E++ + ++ G+
Sbjct: 203 KRADIYAMGLVFWEIAR-RCSIGGI 226
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 3 SVTFSVSPGQGRFGKVYTAVNNETGELVAMKEIQLHKQN----DARFVKDMLVE----LR 54
++ S G+GRFG+V+ GE VA+K ++ +A + +++ L
Sbjct: 43 TIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 100
Query: 55 ILEGINQKN--LVKYYGVEIHREEMVLFMEL-----CTEGTLESLVQSTEDGLPEVLVRR 107
+ N+ N + + V + E LF L EG ++ L ST GL + +
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK-LALSTASGLAHLHM-- 157
Query: 108 YTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNG 166
+ + + I HRD+KS NI + G + D G AV+ SA T+ N
Sbjct: 158 ------EIVGTQGKPAIAHRDLKSKNILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNH 210
Query: 167 FVGTQAYMAPEVFMDTNKVGH---GRAVDIWSLGCVLVEMS 204
VGT+ YMAPEV D+ + H + DI+++G V E++
Sbjct: 211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 310 NIFLTAEGNSLKLGDFGSAVK-ISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGH---G 365
NI + G + D G AV+ SA T+ N VGT+ YMAPEV D+ + H
Sbjct: 177 NILVKKNGTCC-IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 235
Query: 366 RAVDIWSLGCVLVEMSSGKTNLSGV 390
+ DI+++G V E++ + ++ G+
Sbjct: 236 KRADIYAMGLVFWEIAR-RCSIGGI 259
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG +Y + GE VA+K + ++ ++ + ++++G +++ G
Sbjct: 16 GSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIY--KMMQGGVGIPTIRWCGA 73
Query: 71 EIHREEMVLFMELCTEGTLESLVQ--STEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
E MV MEL +LE L S + L VL+ Q++ I +H +HRD
Sbjct: 74 EGDYNVMV--MELLGP-SLEDLFNFCSRKFSLKTVLL--LADQMISRIEYIHSKNFIHRD 128
Query: 129 IKSANIF--LTAEGNSLKLGDFGSAVKI---SAHTTVPGELN-GFVGTQAYMAPEVFMDT 182
+K N L +GN + + DFG A K H +P N GT Y + +
Sbjct: 129 VKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG- 187
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGKRPW 210
+ R D+ SLG VL+ + G PW
Sbjct: 188 --IEQSRRDDLESLGYVLMYFNLGSLPW 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 12/206 (5%)
Query: 11 GQGRFGKVYTAVNNETGE---LVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + G+ VA+K ++ R +D L E I+ + N++
Sbjct: 42 GAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEASIMGQFDHPNVIHL 99
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHR 159
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQA--YMAPEVFMDTNKV 185
D+ + NI + + K+ DFG + + T+ P + G + APE
Sbjct: 160 DLAARNILVNS-NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFT 218
Query: 186 GHGRAVDIWSLGCVLVE-MSSGKRPW 210
A D+WS G V+ E MS G+RP+
Sbjct: 219 S---ASDVWSYGIVMWEVMSYGERPY 241
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FG +Y + GE VA+K + ++ ++ + ++++G +++ G
Sbjct: 18 GSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIY--KMMQGGVGIPTIRWCGA 75
Query: 71 EIHREEMVLFMELCTEGTLESLVQ--STEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
E MV MEL +LE L S + L VL+ Q++ I +H +HRD
Sbjct: 76 EGDYNVMV--MELLGP-SLEDLFNFCSRKFSLKTVLL--LADQMISRIEYIHSKNFIHRD 130
Query: 129 IKSANIF--LTAEGNSLKLGDFGSAVKI---SAHTTVPGELN-GFVGTQAYMAPEVFMDT 182
+K N L +GN + + DFG A K H +P N GT Y + +
Sbjct: 131 VKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG- 189
Query: 183 NKVGHGRAVDIWSLGCVLVEMSSGKRPW 210
+ R D+ SLG VL+ + G PW
Sbjct: 190 --IEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 111
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG A + +A+TT G++ + +PE
Sbjct: 172 DLAARNILINS-NLVCKVSDFGLARVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 225
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 226 KFTS---ASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 266
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L M+L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 84 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 143 RDLAARNV-LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 197
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 166 GFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGKRPWAEYDSNYQIMFKVGM 225
G + A++APE + + R+ D+WS +L E+ + + P+A+ SN +I KV +
Sbjct: 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL-SNMEIGMKVAL 225
Query: 226 -GETPTIPESLSDEGQAFAELCLRHDPAQR 254
G PTIP +S ++C+ DPA+R
Sbjct: 226 EGLRPTIPPGISPHVSKLMKICMNEDPAKR 255
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L M+L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 84 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 143 RDLAARNV-LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 197
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 28 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L M+L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 86 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 144
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 145 RDLAARNV-LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 199
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 41 NDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL 100
ND ++L E +++ ++ +V+ G+ E +L ME+ G L +Q
Sbjct: 51 NDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVK 109
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISA-HTT 159
+ ++ Q+ + L E+ VHRD+ + N+ L + + K+ DFG + + A
Sbjct: 110 DKNIIE-LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENX 167
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQ 218
+ +G + Y APE N D+WS G ++ E S G++P+ + +
Sbjct: 168 YKAQTHGKWPVKWY-APECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-E 222
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
+ + GE P E LC +D R
Sbjct: 223 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 258
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 41 NDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL 100
ND ++L E +++ ++ +V+ G+ E +L ME+ G L +Q
Sbjct: 47 NDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVK 105
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISA-HTT 159
+ ++ Q+ + L E+ VHRD+ + N+ L + + K+ DFG + + A
Sbjct: 106 DKNIIE-LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENY 163
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQ 218
+ +G + Y APE N D+WS G ++ E S G++P+ + +
Sbjct: 164 YKAQTHGKWPVKWY-APECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-E 218
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
+ + GE P E LC +D R
Sbjct: 219 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 254
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 111
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHR 171
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 172 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 225
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 226 KFTS---ASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 266
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 41 NDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL 100
ND ++L E +++ ++ +V+ G+ E +L ME+ G L +Q
Sbjct: 51 NDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVK 109
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISA-HTT 159
+ ++ Q+ + L E+ VHRD+ + N+ L + + K+ DFG + + A
Sbjct: 110 DKNIIE-LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENY 167
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQ 218
+ +G + Y APE N D+WS G ++ E S G++P+ + +
Sbjct: 168 YKAQTHGKWPVKWY-APECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-E 222
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
+ + GE P E LC +D R
Sbjct: 223 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 258
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 41 NDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL 100
ND ++L E +++ ++ +V+ G+ E +L ME+ G L +Q
Sbjct: 45 NDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVK 103
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISA-HTT 159
+ ++ Q+ + L E+ VHRD+ + N+ L + + K+ DFG + + A
Sbjct: 104 DKNIIE-LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENY 161
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQ 218
+ +G + Y APE N D+WS G ++ E S G++P+ + +
Sbjct: 162 YKAQTHGKWPVKWY-APECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-E 216
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
+ + GE P E LC +D R
Sbjct: 217 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 252
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 41 NDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL 100
ND ++L E +++ ++ +V+ G+ E +L ME+ G L +Q
Sbjct: 57 NDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVK 115
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISA-HTT 159
+ ++ Q+ + L E+ VHRD+ + N+ L + + K+ DFG + + A
Sbjct: 116 DKNIIE-LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENY 173
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQ 218
+ +G + Y APE N D+WS G ++ E S G++P+ + +
Sbjct: 174 YKAQTHGKWPVKWY-APECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-E 228
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
+ + GE P E LC +D R
Sbjct: 229 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 264
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L M+L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 85 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 144 RDLAARNV-LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 198
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 41 NDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL 100
ND ++L E +++ ++ +V+ G+ E +L ME+ G L +Q
Sbjct: 65 NDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVK 123
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISA-HTT 159
+ ++ Q+ + L E+ VHRD+ + N+ L + + K+ DFG + + A
Sbjct: 124 DKNIIE-LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENY 181
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQ 218
+ +G + Y APE N D+WS G ++ E S G++P+ + +
Sbjct: 182 YKAQTHGKWPVKWY-APECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-E 236
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
+ + GE P E LC +D R
Sbjct: 237 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 272
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 28 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L M+L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 86 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 144
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 145 RDLAARNV-LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 199
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L M+L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 84 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 143 RDLAARNV-LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 197
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L M+L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 82 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 141 RDLAARNV-LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 195
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 41 NDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL 100
ND ++L E +++ ++ +V+ G+ E +L ME+ G L +Q
Sbjct: 67 NDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVK 125
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISA-HTT 159
+ ++ Q+ + L E+ VHRD+ + N+ L + + K+ DFG + + A
Sbjct: 126 DKNIIE-LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENY 183
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQ 218
+ +G + Y APE N D+WS G ++ E S G++P+ + +
Sbjct: 184 YKAQTHGKWPVKWY-APECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-E 238
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
+ + GE P E LC +D R
Sbjct: 239 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 274
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 41 NDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL 100
ND ++L E +++ ++ +V+ G+ E +L ME+ G L +Q
Sbjct: 67 NDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVK 125
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISA-HTT 159
+ ++ Q+ + L E+ VHRD+ + N+ L + + K+ DFG + + A
Sbjct: 126 DKNIIE-LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENY 183
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQ 218
+ +G + Y APE N D+WS G ++ E S G++P+ + +
Sbjct: 184 YKAQTHGKWPVKWY-APECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-E 238
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
+ + GE P E LC +D R
Sbjct: 239 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 274
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 17/235 (7%)
Query: 11 GQGRFGKVYTAVNNETGE---LVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V G+ VA+K ++ R ++ L E I+ N+++
Sbjct: 25 GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSEASIMGQFEHPNIIRL 82
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G L+S ++ + + + + + + L E + VHR
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHR 142
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQA--YMAPEVFMDTNKV 185
D+ + NI + + K+ DFG + + +++ P E + G + APE
Sbjct: 143 DLAARNILVNS-NLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFT 201
Query: 186 GHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKV----GMGETPTIPESL 235
A D WS G V+ E MS G+RP+ + SN ++ + + P P SL
Sbjct: 202 S---ASDAWSYGIVMWEVMSFGERPYWDM-SNQDVINAIEQDYRLPPPPDCPTSL 252
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 25 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L M+L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 83 LLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 142 RDLAARNV-LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 196
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 42 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 99
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 159
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 160 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 213
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 214 K---FTSASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 254
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 25 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L M+L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 83 LLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 141
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 142 RDLAARNV-LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 196
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 115/281 (40%), Gaps = 41/281 (14%)
Query: 1 MSSVTFSVSPGQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDAR--FVKDMLVEL 53
+S+V F G+ RFGKVY E + VA+K ++ + R F + ++
Sbjct: 8 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA 67
Query: 54 RILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTL---------ESLVQSTEDGL---- 100
R + N+V GV + + + C+ G L S V ST+D
Sbjct: 68 R----LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 101 ---PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAH 157
P V Q+ + L + +VH+D+ + N+ + + N +K+ D G ++ A
Sbjct: 124 ALEPPDFV-HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN-VKISDLGLFREVYAA 181
Query: 158 TTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR---AVDIWSLGCVLVEM-SSGKRPWAEY 213
N + + +MAPE M +G+ DIWS G VL E+ S G +P+ Y
Sbjct: 182 DYYKLLGNSLLPIR-WMAPEAIM------YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 234
Query: 214 DSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
SN ++ + + P+ A C P++R
Sbjct: 235 -SNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRR 274
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 70/178 (39%), Gaps = 36/178 (20%)
Query: 105 VRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFG--------------- 149
VR Y L A+ +H+ IVHRD+K +N L DFG
Sbjct: 119 VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKF 178
Query: 150 ----------SAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCV 199
S K S + ++ GT + APEV T A+D+WS G +
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVL--TKCPNQTTAIDMWSAGVI 236
Query: 200 LVEMSSGKRPWAEYDSNY----QIMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQ 253
+ + SG+ P+ + + QIM G ET ++ G++ LC + PAQ
Sbjct: 237 FLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTF---GKSI--LCSKEVPAQ 289
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 346 GTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVEMSSGK 384
GT + APEV T A+D+WS G + + + SG+
Sbjct: 208 GTPGFRAPEVL--TKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 41 NDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL 100
ND ++L E +++ ++ +V+ G+ E +L ME+ G L +Q +
Sbjct: 410 NDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRH-V 467
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISA-HTT 159
+ + Q+ + L E+ VHRD+ + N+ L + + K+ DFG + + A
Sbjct: 468 KDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENY 526
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQ 218
+ +G + Y APE N D+WS G ++ E S G++P+ + +
Sbjct: 527 YKAQTHGKWPVKWY-APECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-E 581
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
+ + GE P E LC +D R
Sbjct: 582 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 617
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 111
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 172 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 225
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 226 KFTS---ASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 266
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRIL-EGINQKNLVKYYG 69
G+G +V T +N T + A+K I+ + + E+ +L + +N+++
Sbjct: 22 GEGAHARVQTCINLITSQEYAVKIIE---KQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ L E G++ S + E+ + + A+ LH I HRD+
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRH-FNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 130 KSANIFLTAEG--NSLKLGDF--GSAVKISAHTT--VPGELNGFVGTQAYMAPEV---FM 180
K NI + +K+ DF GS +K++ + EL G+ YMAPEV F
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPW 210
+ + + + D+WSLG +L + SG P+
Sbjct: 198 EEASI-YDKRCDLWSLGVILYILLSGYPPF 226
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 318 NSLKLGDFG--SAVKISAHTT--VPGELNGFVGTQAYMAPEV---FMDTNKVGHGRAVDI 370
+ +K+ DFG S +K++ + EL G+ YMAPEV F + + + + D+
Sbjct: 151 SPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI-YDKRCDL 209
Query: 371 WSLGCVLVEMSSGKTNLSG 389
WSLG +L + SG G
Sbjct: 210 WSLGVILYILLSGYPPFVG 228
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 10/216 (4%)
Query: 41 NDARFVKDMLVELRILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESLVQSTEDGL 100
ND ++L E +++ ++ +V+ G+ E +L ME+ G L +Q +
Sbjct: 409 NDPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRH-V 466
Query: 101 PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISA-HTT 159
+ + Q+ + L E+ VHRD+ + N+ L + + K+ DFG + + A
Sbjct: 467 KDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ-HYAKISDFGLSKALRADENY 525
Query: 160 VPGELNGFVGTQAYMAPEVFMDTNKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQ 218
+ +G + Y APE N D+WS G ++ E S G++P+ + +
Sbjct: 526 YKAQTHGKWPVKWY-APECI---NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-E 580
Query: 219 IMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
+ + GE P E LC +D R
Sbjct: 581 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENR 616
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 25 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 82
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 142
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 143 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 196
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 197 K---FTSASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 237
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 111
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 172 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 225
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 226 KFTS---ASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 111
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 172 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 225
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 226 KFTS---ASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 266
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 15/210 (7%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRIL-EGINQKNLVKYYG 69
G+G +V T +N T + A+K I+ + + E+ +L + +N+++
Sbjct: 22 GEGAHARVQTCINLITSQEYAVKIIE---KQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 70 VEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRDI 129
+ L E G++ S + E+ + + A+ LH I HRD+
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRH-FNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 130 KSANIFLTAEG--NSLKLGDF--GSAVKISAHTT--VPGELNGFVGTQAYMAPEV---FM 180
K NI + +K+ DF GS +K++ + EL G+ YMAPEV F
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 181 DTNKVGHGRAVDIWSLGCVLVEMSSGKRPW 210
+ + + + D+WSLG +L + SG P+
Sbjct: 198 EEASI-YDKRCDLWSLGVILYILLSGYPPF 226
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 324 DFGSAVKISAHTT--VPGELNGFVGTQAYMAPEV---FMDTNKVGHGRAVDIWSLGCVLV 378
D GS +K++ + EL G+ YMAPEV F + + + + D+WSLG +L
Sbjct: 159 DLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI-YDKRCDLWSLGVILY 217
Query: 379 EMSSGKTNLSG 389
+ SG G
Sbjct: 218 ILLSGYPPFVG 228
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 111
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 172 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 225
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 226 KFTS---ASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 266
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 111
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHR 171
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 172 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 225
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 226 KFTS---ASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 266
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 25 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 82
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 142
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 143 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 196
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 197 K---FTSASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 237
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 52 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 109
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 169
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 170 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 223
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 224 KFTS---ASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 264
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK-EIQ-LHKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G G FG VY + GE V + I+ L++ + + + E I+ ++ +LV+
Sbjct: 47 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 106
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
GV + + L +L G L V +D + L+ + Q+ + L E +VHRD
Sbjct: 107 GVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRD 165
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQA--YMAPEVFMDTNKVG 186
+ + N+ L N +K+ DFG A + E N G +MA E + K
Sbjct: 166 LAARNV-LVKSPNHVKITDFGLARLLEGDEK---EYNADGGKMPIKWMALEC-IHYRKFT 220
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
H D+WS G + E M+ G +P+
Sbjct: 221 H--QSDVWSYGVTIWELMTFGGKPY 243
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 111
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + +PE
Sbjct: 172 DLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 225
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 226 KFTS---ASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 266
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 11 GQGRFGKVYTA---VNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + + ++ VA+K +++ R +D L E I+ + N+++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIRL 111
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L+S ++ + + + + + + L + VHR
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 171
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + +A+TT G++ + +PE
Sbjct: 172 DLAARNILINS-NLVCKVSDFGLGRVLEDDPEAAYTTRGGKI-----PIRWTSPEAIAYR 225
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFKVGMG 226
A D+WS G VL E MS G+RP+ E SN ++ V G
Sbjct: 226 KFTS---ASDVWSYGIVLWEVMSYGERPYWEM-SNQDVIKAVDEG 266
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 41/281 (14%)
Query: 1 MSSVTFSVSPGQGRFGKVYTA-----VNNETGELVAMKEIQLHKQNDAR--FVKDMLVEL 53
+S+V F G+ RFGKVY E + VA+K ++ + R F + ++
Sbjct: 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA 84
Query: 54 RILEGINQKNLVKYYGVEIHREEMVLFMELCTEGTLESL---------VQSTEDGL---- 100
R + N+V GV + + + C+ G L V ST+D
Sbjct: 85 R----LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 101 ---PEVLVRRYTKQLVDAISALHENTIVHRDIKSANIFLTAEGNSLKLGDFGSAVKISAH 157
P V Q+ + L + +VH+D+ + N+ + + N +K+ D G ++ A
Sbjct: 141 ALEPPDFV-HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN-VKISDLGLFREVYAA 198
Query: 158 TTVPGELNGFVGTQAYMAPEVFMDTNKVGHGR---AVDIWSLGCVLVEM-SSGKRPWAEY 213
N + + +MAPE M +G+ DIWS G VL E+ S G +P+ Y
Sbjct: 199 DYYKLLGNSLLPIR-WMAPEAIM------YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251
Query: 214 DSNYQIMFKVGMGETPTIPESLSDEGQAFAELCLRHDPAQR 254
SN ++ + + P+ A C P++R
Sbjct: 252 -SNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRR 291
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELVAMK-EIQ-LHKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G G FG VY + GE V + I+ L++ + + + E I+ ++ +LV+
Sbjct: 24 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 83
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
GV + + L +L G L V +D + L+ + Q+ + L E +VHRD
Sbjct: 84 GVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRD 142
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQA--YMAPEVFMDTNKVG 186
+ + N+ L N +K+ DFG A + E N G +MA E + K
Sbjct: 143 LAARNV-LVKSPNHVKITDFGLARLLEGDEK---EYNADGGKMPIKWMALEC-IHYRKFT 197
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
H D+WS G + E M+ G +P+
Sbjct: 198 H--QSDVWSYGVTIWELMTFGGKPY 220
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 11 GQGRFGKVYTAVNNETGE---LVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + G+ VA+K +++ R +D L E I+ + N+V
Sbjct: 52 GAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR--RDFLCEASIMGQFDHPNVVHL 109
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ +E G L++ ++ + + + + + + L + VHR
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHR 169
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + I + +TT G++ + APE
Sbjct: 170 DLAARNILVNS-NLVCKVSDFGLSRVIEDDPEAVYTTTGGKI-----PVRWTAPEAIQYR 223
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFK 222
A D+WS G V+ E MS G+RP+ +D + Q + K
Sbjct: 224 KFTS---ASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIK 259
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L +L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 84 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E + +++
Sbjct: 143 RDLAARNV-LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESIL--HRI- 197
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 11 GQGRFGKVYTAVNNETGE---LVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + G+ VA+K ++ + R +D L E I+ + N++
Sbjct: 17 GVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSEASIMGQFDHPNIIHL 74
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L++ ++ + + + + + + L + + VHR
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHR 134
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + APE
Sbjct: 135 DLAARNILVNS-NLVCKVSDFGMSRVLEDDPEAAYTTRGGKI-----PIRWTAPEAIAYR 188
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFK 222
A D+WS G V+ E MS G+RP+ +D + Q + K
Sbjct: 189 K---FTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIK 224
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L +L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 82 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 141 RDLAARNV-LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 195
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 11 GQGRFGKVYTAVNNETGE---LVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKY 67
G G FG+V + G+ VA+K ++ + R +D L E I+ + N++
Sbjct: 38 GVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSEASIMGQFDHPNIIHL 95
Query: 68 YGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHR 127
GV + +++ E G+L++ ++ + + + + + + L + + VHR
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHR 155
Query: 128 DIKSANIFLTAEGNSLKLGDFGSAVKI-----SAHTTVPGELNGFVGTQAYMAPEVFMDT 182
D+ + NI + + K+ DFG + + +A+TT G++ + APE
Sbjct: 156 DLAARNILVNS-NLVCKVSDFGMSRVLEDDPEAAYTTRGGKI-----PIRWTAPEAIAYR 209
Query: 183 NKVGHGRAVDIWSLGCVLVE-MSSGKRPWAEYDSNYQIMFK 222
A D+WS G V+ E MS G+RP+ +D + Q + K
Sbjct: 210 K---FTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIK 245
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 30/205 (14%)
Query: 11 GQGRFGKVYTAVNNETGELVAMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYYGV 70
G G FGKVY V + G VA+K ++ +++ E+ L +LV G
Sbjct: 48 GHGVFGKVYKGVLRD-GAKVALKR---RTPESSQGIEEFETEIETLSFCRHPHLVSLIGF 103
Query: 71 EIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISA------LHENTI 124
R EM+L + G L+ + ++ LP + + ++L I A LH I
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSD--LP-TMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 125 VHRDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGE--LNGFV-GTQAYMAPEVFMD 181
+HRD+KS NI L E K+ DFG IS T G+ L V GT Y+ PE F+
Sbjct: 161 IHRDVKSINILLD-ENFVPKITDFG----ISKKGTELGQTHLXXVVKGTLGYIDPEYFIK 215
Query: 182 TNKVGHGRAV---DIWSLGCVLVEM 203
GR D++S G VL E+
Sbjct: 216 ------GRLTEKSDVYSFGVVLFEV 234
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 31 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L +L G L V+ +D + + + Q+ ++ L + +VH
Sbjct: 89 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 148 RDLAARNV-LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 202
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 11 GQGRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVK 66
G G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 21 GSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 67 YYGVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVH 126
G+ + + L +L G L V+ +D + + + Q+ + ++ L + +VH
Sbjct: 79 LLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVH 137
Query: 127 RDIKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVG 186
RD+ + N+ L +K+ DFG A + A G V + +MA E +
Sbjct: 138 RDLAARNV-LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI--- 192
Query: 187 HGRAVDIWSLGCVLVE-MSSGKRPW 210
+ D+WS G + E M+ G +P+
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 13 GRFGKVYTAVNNETGELV----AMKEIQLHKQNDARFVKDMLVELRILEGINQKNLVKYY 68
G FG VY + GE V A+KE L + + K++L E ++ ++ ++ +
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 69 GVEIHREEMVLFMELCTEGTLESLVQSTEDGLPEVLVRRYTKQLVDAISALHENTIVHRD 128
G+ + + L M+L G L V+ +D + + + Q+ ++ L + +VHRD
Sbjct: 91 GICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 149
Query: 129 IKSANIFLTAEGNSLKLGDFGSAVKISAHTTVPGELNGFVGTQAYMAPEVFMDTNKVGHG 188
+ + N+ L +K+ DFG A + A G V + +MA E + +
Sbjct: 150 LAARNV-LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK-WMALESILHRI---YT 204
Query: 189 RAVDIWSLGCVLVE-MSSGKRPW 210
D+WS G + E M+ G +P+
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPY 227
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,969,831
Number of Sequences: 62578
Number of extensions: 492763
Number of successful extensions: 5386
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 1346
Number of HSP's gapped (non-prelim): 1916
length of query: 407
length of database: 14,973,337
effective HSP length: 101
effective length of query: 306
effective length of database: 8,652,959
effective search space: 2647805454
effective search space used: 2647805454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)