Query psy10604
Match_columns 225
No_of_seqs 168 out of 2511
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 22:38:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10604.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10604hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 1.6E-30 5.5E-35 194.2 18.5 132 62-213 31-162 (169)
2 4gpm_A Engineered protein OR26 100.0 2.8E-28 9.6E-33 182.0 17.4 124 70-213 6-129 (169)
3 1d9s_A Cyclin-dependent kinase 100.0 1.8E-28 6.2E-33 176.3 13.5 127 64-211 8-135 (136)
4 2jab_A H10-2-G3; HER2, darpin, 100.0 5.3E-28 1.8E-32 173.8 15.6 125 65-209 11-135 (136)
5 1n0r_A 4ANK, 4 ankyrin repeats 100.0 2.4E-27 8.1E-32 167.2 17.0 125 67-211 1-125 (126)
6 1awc_B Protein (GA binding pro 100.0 5.4E-27 1.8E-31 171.7 17.6 123 64-206 30-152 (153)
7 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.3E-26 4.5E-31 172.5 18.5 127 63-209 42-168 (169)
8 3v30_A DNA-binding protein rfx 100.0 5E-27 1.7E-31 174.9 16.0 128 63-210 31-158 (172)
9 2rfm_A Putative ankyrin repeat 100.0 7.5E-27 2.6E-31 177.1 17.2 125 64-208 64-188 (192)
10 1bi7_B P16INK4A, MTS1, multipl 99.9 9.3E-28 3.2E-32 176.5 11.6 130 65-215 9-139 (156)
11 3twr_A Tankyrase-2; ankyrin re 99.9 3.2E-27 1.1E-31 174.9 14.4 130 61-211 35-164 (165)
12 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.7E-27 2E-31 172.8 15.6 129 62-211 32-161 (162)
13 4b93_B Ankyrin repeat domain-c 99.9 6.1E-27 2.1E-31 187.2 16.3 131 63-213 81-211 (269)
14 3f6q_A Integrin-linked protein 99.9 5.2E-27 1.8E-31 176.2 14.9 133 62-214 33-165 (179)
15 2rfm_A Putative ankyrin repeat 99.9 5.3E-27 1.8E-31 177.9 14.9 130 64-213 31-160 (192)
16 3v31_A Ankyrin repeat family A 99.9 1.4E-26 4.7E-31 171.7 16.8 128 62-209 30-157 (167)
17 3c5r_A BARD-1, BRCA1-associate 99.9 8.9E-28 3E-32 172.7 9.5 126 64-209 6-131 (137)
18 3v31_A Ankyrin repeat family A 99.9 1.5E-26 5.1E-31 171.6 15.9 127 67-213 2-128 (167)
19 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.1E-26 1.4E-30 169.7 17.1 129 65-213 11-139 (169)
20 3aaa_C Myotrophin, protein V-1 99.9 8.1E-27 2.8E-31 164.7 12.0 112 65-195 4-115 (123)
21 1s70_B 130 kDa myosin-binding 99.9 8.2E-26 2.8E-30 182.3 18.7 149 63-213 68-258 (299)
22 1awc_B Protein (GA binding pro 99.9 6.5E-26 2.2E-30 165.9 16.1 125 68-213 2-126 (153)
23 1bd8_A P19INK4D CDK4/6 inhibit 99.9 6.2E-26 2.1E-30 166.3 15.6 125 62-208 30-154 (156)
24 1oy3_D Transcription factor in 99.9 1.6E-25 5.5E-30 178.7 18.9 150 63-214 40-252 (282)
25 1oy3_D Transcription factor in 99.9 9E-26 3.1E-30 180.2 16.9 149 64-214 5-219 (282)
26 1yyh_A HN1;, notch 1, ankyrin 99.9 2E-25 6.9E-30 176.4 18.6 148 64-213 53-216 (253)
27 4b93_B Ankyrin repeat domain-c 99.9 1.1E-26 3.6E-31 185.8 11.1 126 63-207 114-239 (269)
28 3aji_A 26S proteasome non-ATPa 99.9 3.5E-25 1.2E-29 172.2 18.9 147 65-213 37-198 (231)
29 2etb_A Transient receptor pote 99.9 3.5E-26 1.2E-30 180.8 13.2 127 64-210 86-244 (256)
30 2f8y_A Notch homolog 1, transl 99.9 4E-25 1.4E-29 170.9 18.9 129 65-213 89-217 (223)
31 1ihb_A P18-INK4C(INK6), cyclin 99.9 9.1E-26 3.1E-30 166.3 14.2 125 66-211 3-127 (162)
32 3f6q_A Integrin-linked protein 99.9 2.3E-25 7.8E-30 167.1 16.5 128 66-213 3-131 (179)
33 3twr_A Tankyrase-2; ankyrin re 99.9 1.8E-25 6E-30 165.4 15.2 129 65-213 5-134 (165)
34 3aji_A 26S proteasome non-ATPa 99.9 7.6E-25 2.6E-29 170.3 19.4 146 66-213 4-165 (231)
35 2vge_A RELA-associated inhibit 99.9 2.8E-26 9.7E-31 179.2 11.2 131 63-213 16-149 (229)
36 1k1a_A B-cell lymphoma 3-encod 99.9 1.5E-24 5E-29 169.4 20.9 150 62-213 40-209 (241)
37 2rfa_A Transient receptor pote 99.9 5E-25 1.7E-29 171.5 17.8 145 62-212 31-183 (232)
38 2xai_A ASB-9, ankyrin repeat a 99.9 6.1E-25 2.1E-29 174.5 18.5 149 62-213 30-192 (261)
39 3v30_A DNA-binding protein rfx 99.9 2.2E-25 7.4E-30 166.1 14.9 126 68-213 2-128 (172)
40 3hra_A Ankyrin repeat family p 99.9 6.7E-25 2.3E-29 167.1 18.0 145 62-208 33-199 (201)
41 3jxi_A Vanilloid receptor-rela 99.9 4.6E-26 1.6E-30 180.4 11.9 128 64-210 89-248 (260)
42 2rfa_A Transient receptor pote 99.9 6.5E-25 2.2E-29 170.8 17.8 129 63-210 70-220 (232)
43 2dzn_A Probable 26S proteasome 99.9 5.5E-25 1.9E-29 170.6 17.2 129 65-213 69-201 (228)
44 2pnn_A Transient receptor pote 99.9 1.3E-25 4.3E-30 179.3 13.9 129 64-210 97-257 (273)
45 3utm_A Tankyrase-1; tankyrase, 99.9 1.7E-24 5.9E-29 177.6 20.6 147 65-213 88-306 (351)
46 2f8y_A Notch homolog 1, transl 99.9 1.4E-24 4.9E-29 167.8 19.0 146 66-213 23-184 (223)
47 3deo_A Signal recognition part 99.9 2E-26 6.7E-31 173.8 8.2 115 65-198 41-155 (183)
48 1ikn_D Protein (I-kappa-B-alph 99.9 2.1E-25 7.3E-30 174.2 14.3 145 64-210 41-207 (236)
49 1yyh_A HN1;, notch 1, ankyrin 99.9 3.5E-25 1.2E-29 175.0 15.4 143 64-208 86-244 (253)
50 3t8k_A Uncharacterized protein 99.9 4.6E-26 1.6E-30 172.5 9.7 122 66-207 36-174 (186)
51 4hbd_A KN motif and ankyrin re 99.9 8.1E-25 2.8E-29 175.4 17.0 124 64-207 107-270 (276)
52 3ehr_A Osteoclast-stimulating 99.9 4E-26 1.4E-30 177.0 9.1 127 65-211 70-197 (222)
53 3hra_A Ankyrin repeat family p 99.9 1.9E-24 6.3E-29 164.6 17.6 112 64-176 68-201 (201)
54 2xai_A ASB-9, ankyrin repeat a 99.9 1.2E-24 4E-29 172.9 16.9 146 67-214 2-161 (261)
55 2dzn_A Probable 26S proteasome 99.9 3.2E-24 1.1E-28 166.2 18.9 130 64-213 32-167 (228)
56 3kea_A K1L; tropism, ANK repea 99.9 1.5E-25 5.1E-30 180.5 11.5 148 67-216 61-224 (285)
57 3kea_A K1L; tropism, ANK repea 99.9 3.2E-25 1.1E-29 178.5 13.2 127 62-210 25-152 (285)
58 3ljn_A Hypothetical protein; a 99.9 3.6E-25 1.2E-29 183.6 13.9 128 64-211 134-268 (364)
59 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.2E-25 4.3E-30 176.4 10.5 128 65-212 34-164 (239)
60 3d9h_A CDNA FLJ77766, highly s 99.9 2.6E-24 8.7E-29 173.2 18.4 147 64-213 88-248 (285)
61 4g8k_A 2-5A-dependent ribonucl 99.9 2.4E-24 8.2E-29 176.8 17.9 148 66-213 23-195 (337)
62 3b7b_A Euchromatic histone-lys 99.9 3.3E-24 1.1E-28 167.2 17.9 149 64-214 7-171 (237)
63 3b7b_A Euchromatic histone-lys 99.9 4.5E-24 1.6E-28 166.5 18.5 147 65-213 41-203 (237)
64 2etb_A Transient receptor pote 99.9 4E-25 1.4E-29 174.7 12.5 142 64-210 39-204 (256)
65 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-24 5.4E-29 158.7 14.7 121 68-209 2-123 (156)
66 1ikn_D Protein (I-kappa-B-alph 99.9 7.1E-25 2.4E-29 171.3 13.5 115 64-196 113-229 (236)
67 3ui2_A Signal recognition part 99.9 6.6E-25 2.3E-29 172.9 12.4 112 65-195 42-153 (244)
68 3d9h_A CDNA FLJ77766, highly s 99.9 4.3E-24 1.5E-28 171.9 17.2 152 61-214 52-217 (285)
69 1s70_B 130 kDa myosin-binding 99.9 7.9E-25 2.7E-29 176.5 12.6 131 64-213 36-166 (299)
70 1n11_A Ankyrin; clathrin, BAND 99.9 2.5E-24 8.5E-29 182.6 15.6 128 65-212 44-171 (437)
71 1k1a_A B-cell lymphoma 3-encod 99.9 7.6E-24 2.6E-28 165.3 17.0 149 64-214 5-177 (241)
72 1n11_A Ankyrin; clathrin, BAND 99.9 6.5E-24 2.2E-28 180.0 17.6 148 64-213 208-370 (437)
73 1wdy_A 2-5A-dependent ribonucl 99.9 9.7E-24 3.3E-28 168.2 17.5 132 65-216 145-282 (285)
74 3eu9_A Huntingtin-interacting 99.9 2.1E-23 7.3E-28 162.3 18.9 148 65-214 73-237 (240)
75 3utm_A Tankyrase-1; tankyrase, 99.9 2.8E-23 9.6E-28 170.3 20.6 151 62-214 52-274 (351)
76 3ljn_A Hypothetical protein; a 99.9 3.3E-24 1.1E-28 177.8 15.1 142 65-208 17-194 (364)
77 1wdy_A 2-5A-dependent ribonucl 99.9 1.1E-23 3.8E-28 167.8 17.1 128 67-213 4-131 (285)
78 2fo1_E LIN-12 protein; beta-ba 99.9 8.9E-24 3E-28 176.2 16.7 151 62-214 160-340 (373)
79 1n0q_A 3ANK, 3 ankyrin repeats 99.9 6.6E-24 2.2E-28 142.5 12.8 93 67-178 1-93 (93)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 9.9E-25 3.4E-29 171.2 9.8 127 66-213 3-129 (239)
81 3lvq_E ARF-GAP with SH3 domain 99.9 1.5E-23 5.3E-28 181.0 17.6 132 68-219 132-272 (497)
82 3jxi_A Vanilloid receptor-rela 99.9 2.9E-24 1E-28 170.0 12.0 141 65-210 43-208 (260)
83 1sw6_A Regulatory protein SWI6 99.9 1.5E-24 5.1E-29 177.9 10.4 131 64-214 127-310 (327)
84 2pnn_A Transient receptor pote 99.9 5.8E-24 2E-28 169.7 13.2 141 64-209 50-215 (273)
85 1dcq_A PYK2-associated protein 99.9 3.8E-23 1.3E-27 166.0 16.8 125 68-212 130-263 (278)
86 3eu9_A Huntingtin-interacting 99.9 5.2E-23 1.8E-27 160.1 17.0 150 63-213 37-203 (240)
87 2b0o_E UPLC1; arfgap, structur 99.9 1.7E-23 5.9E-28 169.8 14.3 126 66-211 149-283 (301)
88 2fo1_E LIN-12 protein; beta-ba 99.9 2E-23 6.8E-28 174.1 15.0 146 64-211 195-370 (373)
89 4g8k_A 2-5A-dependent ribonucl 99.9 4.7E-23 1.6E-27 169.1 16.8 130 64-213 164-299 (337)
90 3jue_A Arfgap with coiled-coil 99.9 3.8E-23 1.3E-27 171.9 15.4 122 67-206 198-321 (368)
91 2l6b_A NR1C; ankyrin, consensu 99.9 5.1E-24 1.7E-28 148.4 7.1 108 64-190 5-112 (115)
92 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.3E-22 4.4E-27 136.1 12.6 92 101-211 1-92 (93)
93 2vge_A RELA-associated inhibit 99.9 1.2E-24 4.1E-29 169.9 0.8 130 63-210 49-212 (229)
94 1bi7_B P16INK4A, MTS1, multipl 99.9 6.1E-23 2.1E-27 150.6 9.3 111 63-193 40-151 (156)
95 2b0o_E UPLC1; arfgap, structur 99.9 7.6E-23 2.6E-27 166.0 8.5 111 64-199 186-299 (301)
96 4hbd_A KN motif and ankyrin re 99.9 2.1E-22 7.2E-27 161.3 10.3 144 68-213 76-243 (276)
97 1sw6_A Regulatory protein SWI6 99.9 6.9E-23 2.4E-27 167.9 7.2 134 63-197 159-327 (327)
98 3t8k_A Uncharacterized protein 99.9 8E-23 2.7E-27 154.7 6.8 126 68-213 6-147 (186)
99 3c5r_A BARD-1, BRCA1-associate 99.9 4.5E-21 1.5E-25 137.5 13.0 102 91-213 1-102 (137)
100 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-20 5.9E-25 134.3 14.0 95 63-176 42-136 (136)
101 1d9s_A Cyclin-dependent kinase 99.9 1.9E-21 6.5E-26 139.4 8.7 96 63-178 40-136 (136)
102 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3.2E-20 1.1E-24 130.3 13.7 96 64-178 31-126 (126)
103 2aja_A Ankyrin repeat family p 99.8 2.3E-22 8E-27 167.6 1.2 129 64-210 88-222 (376)
104 2zgd_A 3 repeat synthetic anky 99.8 5E-20 1.7E-24 127.3 11.7 90 64-172 20-109 (110)
105 3lvq_E ARF-GAP with SH3 domain 99.8 2.4E-20 8.3E-25 161.0 12.1 107 65-190 168-277 (497)
106 3aaa_C Myotrophin, protein V-1 99.8 6.5E-20 2.2E-24 129.0 11.4 95 100-213 5-99 (123)
107 1dcq_A PYK2-associated protein 99.8 6.5E-20 2.2E-24 147.1 12.8 96 65-179 166-264 (278)
108 2l6b_A NR1C; ankyrin, consensu 99.8 2.1E-20 7.1E-25 129.9 8.7 99 97-215 5-103 (115)
109 3deo_A Signal recognition part 99.8 1.1E-19 3.8E-24 136.6 12.1 112 61-208 69-180 (183)
110 2zgd_A 3 repeat synthetic anky 99.8 2.1E-19 7.3E-24 124.1 10.2 88 100-206 22-109 (110)
111 2aja_A Ankyrin repeat family p 99.8 5.3E-22 1.8E-26 165.5 -4.8 122 64-213 124-251 (376)
112 3jue_A Arfgap with coiled-coil 99.8 8.2E-19 2.8E-23 145.8 12.9 114 66-198 233-349 (368)
113 3ehr_A Osteoclast-stimulating 99.8 1.5E-19 5.1E-24 139.8 7.3 107 62-187 100-207 (222)
114 3ui2_A Signal recognition part 99.8 5.4E-18 1.8E-22 133.2 11.0 112 61-208 70-181 (244)
115 3zrh_A Ubiquitin thioesterase 54.0 43 0.0015 27.8 6.9 50 75-124 29-91 (454)
116 1gp8_A Protein (scaffolding pr 44.5 16 0.00054 19.1 2.0 18 72-89 17-34 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.6e-30 Score=194.19 Aligned_cols=132 Identities=31% Similarity=0.474 Sum_probs=121.6
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ 141 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 141 (225)
...+..|.||||+|+..++.+++++|++.|++++.++ ..|+||||+|+..|+.+++++|++.|++++.++.
T Consensus 31 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~-------- 101 (169)
T 4gpm_A 31 NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD-SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-------- 101 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--------
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhc-cCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC--------
Confidence 3457889999999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 142 LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 142 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+. .++++|++.|+.+
T Consensus 102 ----------~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~-~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 102 ----------DGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNE-EVVKLLEKQGGWL 162 (169)
T ss_dssp ----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHTC----
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH-HHHHHHHHCCCCc
Confidence 999999999999999999999999999999999999999999999995 6778888887765
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=2.8e-28 Score=181.98 Aligned_cols=124 Identities=34% Similarity=0.586 Sum_probs=115.9
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhhhcc
Q psy10604 70 TSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNI 149 (225)
Q Consensus 70 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~ 149 (225)
++|+.||..|+.++|++|++.|++++.++ ..|.||||+|+..++.+++++|++.|++++.++.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d-~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~---------------- 68 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASD-SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS---------------- 68 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHhcccchhhhcc----------------
Confidence 57999999999999999999999999999 8999999999999999999999999999999886
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 150 KNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 150 d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+. .++++|+..++.+
T Consensus 69 --~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~-~~v~~Ll~~gad~ 129 (169)
T 4gpm_A 69 --DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHK-EVVKLLISKGADV 129 (169)
T ss_dssp --TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCCT
T ss_pred --CCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCc
Confidence 999999999999999999999999999999999999999999999996 5666666666554
No 3
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1.8e-28 Score=176.28 Aligned_cols=127 Identities=23% Similarity=0.278 Sum_probs=118.1
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+. |+.+++++|++.|++++.++.
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~---------- 75 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLLEAGADPNALN-RFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADP---------- 75 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBT----------
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcC-CCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCC----------
Confidence 46789999999999999999999999999999998 899999999999 999999999999999999886
Q ss_pred hhhhccCCC-CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q psy10604 144 IHQKNIKNN-GLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDAT 211 (225)
Q Consensus 144 ~~~~~~d~~-g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~ 211 (225)
. |+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..|+
T Consensus 76 --------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-~~~~~Ll~~Ga 135 (136)
T 1d9s_A 76 --------ATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHR-DIARYLHAATG 135 (136)
T ss_dssp --------TTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCH-HHHHHHHHHHC
T ss_pred --------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHcCC
Confidence 7 99999999999999999999999999999999999999999999996 55666665543
No 4
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=5.3e-28 Score=173.83 Aligned_cols=125 Identities=37% Similarity=0.480 Sum_probs=116.8
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
...+.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~----------- 78 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKD-EYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDA----------- 78 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-----------
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-----------
Confidence 5668999999999999999999999999999998 8999999999999999999999999999998886
Q ss_pred hhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhc
Q psy10604 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITD 209 (225)
Q Consensus 145 ~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~ 209 (225)
.|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..
T Consensus 79 -------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~-~~~~~Ll~~ 135 (136)
T 2jab_A 79 -------IGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNE-DLAEILQKL 135 (136)
T ss_dssp -------TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHC
T ss_pred -------CCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCH-HHHHHHHHc
Confidence 899999999999999999999999999999999999999999999996 566666654
No 5
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=2.4e-27 Score=167.24 Aligned_cols=125 Identities=42% Similarity=0.657 Sum_probs=117.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhh
Q psy10604 67 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQ 146 (225)
Q Consensus 67 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~ 146 (225)
+|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..++.+++++|++.|++++.++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~------------- 66 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK------------- 66 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-------------
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcC-CCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCC-------------
Confidence 58999999999999999999999999999998 8999999999999999999999999999998885
Q ss_pred hccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q psy10604 147 KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDAT 211 (225)
Q Consensus 147 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~ 211 (225)
.|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..|+
T Consensus 67 -----~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~-~~~~~Ll~~Ga 125 (126)
T 1n0r_A 67 -----NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL-EVVKLLLEAGA 125 (126)
T ss_dssp -----TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHTC
T ss_pred -----CCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcH-HHHHHHHHcCC
Confidence 899999999999999999999999999999999999999999999996 56666666654
No 6
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=5.4e-27 Score=171.69 Aligned_cols=123 Identities=29% Similarity=0.352 Sum_probs=115.4
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---------- 98 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART-KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM---------- 98 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT----------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCC----------
Confidence 46789999999999999999999999999999998 8999999999999999999999999999998886
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHH
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSA 206 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l 206 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|
T Consensus 99 --------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~-~i~~~L 152 (153)
T 1awc_B 99 --------LKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE-DLAEIL 152 (153)
T ss_dssp --------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHH
T ss_pred --------CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH-HHHHHh
Confidence 899999999999999999999999999999999999999999999996 455544
No 7
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.3e-26 Score=172.46 Aligned_cols=127 Identities=35% Similarity=0.428 Sum_probs=114.8
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHh
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQL 142 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~ 142 (225)
..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 42 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~--------- 111 (169)
T 2y1l_E 42 AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD-HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDM--------- 111 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT---------
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC---------
Confidence 346788999999999999999999999999999988 8899999999999999999999999999988875
Q ss_pred hhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhc
Q psy10604 143 NIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITD 209 (225)
Q Consensus 143 ~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~ 209 (225)
.|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. .++++|++.
T Consensus 112 ---------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~-~~~~~L~~~ 168 (169)
T 2y1l_E 112 ---------EGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNE-DLAEILQKL 168 (169)
T ss_dssp ---------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHTC
T ss_pred ---------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCH-HHHHHHHHc
Confidence 899999999999999999999999999999999999999999999995 566666654
No 8
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=5e-27 Score=174.94 Aligned_cols=128 Identities=25% Similarity=0.301 Sum_probs=119.1
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHh
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQL 142 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~ 142 (225)
..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~--------- 100 (172)
T 3v30_A 31 KPDERGFTPLIWASAFGEIETVRFLLEWGADPHILA-KERESALSLASTGGYTDIVGLLLERDVDINIYDW--------- 100 (172)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT---------
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhc-ccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC---------
Confidence 346789999999999999999999999999999998 8999999999999999999999999999998886
Q ss_pred hhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcC
Q psy10604 143 NIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDA 210 (225)
Q Consensus 143 ~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~ 210 (225)
.|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..+
T Consensus 101 ---------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~-~~~~~L~~~~ 158 (172)
T 3v30_A 101 ---------NGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYR-KVQQVIENHI 158 (172)
T ss_dssp ---------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHHH
T ss_pred ---------CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcH-HHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999996 5666665544
No 9
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=7.5e-27 Score=177.09 Aligned_cols=125 Identities=25% Similarity=0.289 Sum_probs=99.5
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 64 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---------- 132 (192)
T 2rfm_A 64 KDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKD-FSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL---------- 132 (192)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT----------
T ss_pred ccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC----------
Confidence 45667788888888888888888888888887777 6788888888888888888888888888777764
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhh
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAIT 208 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~ 208 (225)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+.
T Consensus 133 --------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~-~~v~~Ll~ 188 (192)
T 2rfm_A 133 --------EGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQ-EVIKIFTE 188 (192)
T ss_dssp --------TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH-HHHHHHHH
T ss_pred --------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcH-HHHHHHHh
Confidence 788888888888888888888888888888888888888888888885 45555544
No 10
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=9.3e-28 Score=176.49 Aligned_cols=130 Identities=23% Similarity=0.272 Sum_probs=117.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+ .|+.+++++|++.|++++.++.
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~----------- 75 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPN-SYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP----------- 75 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCC-SSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT-----------
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC-----------
Confidence 5778999999999999999999999999999998 89999999996 9999999999999999999886
Q ss_pred hhhccCCCCCc-HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCCch
Q psy10604 145 HQKNIKNNGLN-ALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSLPC 215 (225)
Q Consensus 145 ~~~~~d~~g~t-~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~~~ 215 (225)
.|+| |||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..|+..+.
T Consensus 76 -------~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 76 -------ATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHR-DVARYLRAAAGGTRG 139 (156)
T ss_dssp -------TTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCH-HHHHHHSSCC-----
T ss_pred -------CCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHH-HHHHHHHHcCCCCCc
Confidence 8998 99999999999999999999999999999999999999999995 677778877776644
No 11
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=3.2e-27 Score=174.87 Aligned_cols=130 Identities=25% Similarity=0.328 Sum_probs=118.7
Q ss_pred CcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHH
Q psy10604 61 CYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDN 140 (225)
Q Consensus 61 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 140 (225)
....+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~------- 106 (165)
T 3twr_A 35 CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKD-KGGLVPLHNACSYGHYEVAELLVKHGAVVNVADL------- 106 (165)
T ss_dssp CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-------
T ss_pred ccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccC-CCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCC-------
Confidence 33456778899999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred HhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q psy10604 141 QLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDAT 211 (225)
Q Consensus 141 ~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~ 211 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+. |+. .++++|+..|+
T Consensus 107 -----------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~-~i~~~L~~~gA 164 (165)
T 3twr_A 107 -----------WKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDT-DIQDLLRGDAA 164 (165)
T ss_dssp -----------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCH-HHHHHHHTC--
T ss_pred -----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CCh-HHHHHHhhccc
Confidence 89999999999999999999999999999999999999999877 775 78888877664
No 12
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=5.7e-27 Score=172.76 Aligned_cols=129 Identities=31% Similarity=0.359 Sum_probs=118.3
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ 141 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 141 (225)
...+..|.||||+|+. |+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 32 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-------- 101 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKD-RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN-------- 101 (162)
T ss_dssp TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--------
T ss_pred cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC--------
Confidence 3356789999999999 99999999999999999998 8999999999999999999999999999998886
Q ss_pred hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q psy10604 142 LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCK-VDASTKKGNTALHIAALDSLVTDIASSAITDAT 211 (225)
Q Consensus 142 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~ 211 (225)
.|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+. .++++|+..|+
T Consensus 102 ----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~-~~~~~Ll~~GA 161 (162)
T 1ihb_A 102 ----------EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRN-EVVSLMQANGA 161 (162)
T ss_dssp ----------TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTC-
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCH-HHHHHHHHhCC
Confidence 899999999999999999999999998 599999999999999999995 67777777665
No 13
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=6.1e-27 Score=187.21 Aligned_cols=131 Identities=28% Similarity=0.404 Sum_probs=114.5
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHh
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQL 142 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~ 142 (225)
..+.+|.||||+|+..|+.+++++|++.|++++..+ ..|.||+|+|+..++.+++++|++.|++++.++.
T Consensus 81 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~--------- 150 (269)
T 4b93_B 81 VTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARN-ADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL--------- 150 (269)
T ss_dssp CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT---------
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC-CCCCCccccccccChHHHHHHHHHCCCCCCCCCC---------
Confidence 357889999999999999999999999999999988 8899999999999999999999999999998886
Q ss_pred hhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 143 NIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 143 ~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+. .++++|+..|+.+
T Consensus 151 ---------~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~Gad~ 211 (269)
T 4b93_B 151 ---------SGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHV-FVVELLLLHGASV 211 (269)
T ss_dssp ---------TCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH-HHHHHHHHTTCCS
T ss_pred ---------CCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCH-HHHHHHHHCCCCC
Confidence 888888888888888888888888888888888888888888888885 4556666666554
No 14
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=5.2e-27 Score=176.16 Aligned_cols=133 Identities=26% Similarity=0.269 Sum_probs=123.7
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ 141 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 141 (225)
...+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-------- 103 (179)
T 3f6q_A 33 NQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMN-RGDDTPLHLAASHGHRDIVQKLLQYKADINAVNE-------- 103 (179)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--------
T ss_pred cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC--------
Confidence 3457789999999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCCc
Q psy10604 142 LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSLP 214 (225)
Q Consensus 142 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~~ 214 (225)
.|+||||+|+..++.+++++|+++|++++.+|..|.|||++|+..++ ..++++|++.++.++
T Consensus 104 ----------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~-~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 104 ----------HGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLR-ELLRERAEKMGQNLN 165 (179)
T ss_dssp ----------TSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHH-HHHHHHHHHTTCCCS
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHH-HHHHHHHHHhhcCcc
Confidence 99999999999999999999999999999999999999999999888 577788888777664
No 15
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=5.3e-27 Score=177.93 Aligned_cols=130 Identities=20% Similarity=0.257 Sum_probs=120.6
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---------- 99 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKD-IEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF---------- 99 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT----------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhcccccccc-ccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC----------
Confidence 36789999999999999999999999999999998 8899999999999999999999999999998885
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..++.+
T Consensus 100 --------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~~ 160 (192)
T 2rfm_A 100 --------SGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRS-EIVKKLLELGADI 160 (192)
T ss_dssp --------TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCH-HHHHHHHHTTCCT
T ss_pred --------CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHCCCCC
Confidence 899999999999999999999999999999999999999999999996 5666666666554
No 16
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.4e-26 Score=171.73 Aligned_cols=128 Identities=23% Similarity=0.310 Sum_probs=117.4
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ 141 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 141 (225)
...+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-------- 100 (167)
T 3v31_A 30 NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG-KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDW-------- 100 (167)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT--------
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCC--------
Confidence 3356789999999999999999999999999999998 8999999999999999999999999999998885
Q ss_pred hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhc
Q psy10604 142 LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITD 209 (225)
Q Consensus 142 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~ 209 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..
T Consensus 101 ----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~-~~~~~L~~~ 157 (167)
T 3v31_A 101 ----------NGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYR-SVQQVIESH 157 (167)
T ss_dssp ----------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHH
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcH-HHHHHHHHH
Confidence 899999999999999999999999999999999999999999999996 566666553
No 17
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=8.9e-28 Score=172.70 Aligned_cols=126 Identities=25% Similarity=0.278 Sum_probs=114.8
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~---------- 74 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKD-HAGWTPLHEACNHGHLKVVELLLQHKALVNTTGY---------- 74 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCG----------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCC----------
Confidence 46789999999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhc
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITD 209 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~ 209 (225)
.|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..+.. .+..++.++
T Consensus 75 --------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~-~~l~~l~~~ 131 (137)
T 3c5r_A 75 --------QNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMK-SLLLLPEKN 131 (137)
T ss_dssp --------GGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHH-HHHSCC---
T ss_pred --------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHH-HHHhhcccc
Confidence 899999999999999999999999999999999999999999987763 455555444
No 18
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.5e-26 Score=171.58 Aligned_cols=127 Identities=25% Similarity=0.271 Sum_probs=117.9
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhh
Q psy10604 67 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQ 146 (225)
Q Consensus 67 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~ 146 (225)
.|.||||.|+..|+.+++++|++.|.+++..+ ..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~------------- 67 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTD-EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK------------- 67 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-------------
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC-------------
Confidence 57899999999999999999999999999998 8999999999999999999999999999998885
Q ss_pred hccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 147 KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 147 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..+...
T Consensus 68 -----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~ 128 (167)
T 3v31_A 68 -----GRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHV-KCVKMLLESGADP 128 (167)
T ss_dssp -----TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCCT
T ss_pred -----CCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCC
Confidence 899999999999999999999999999999999999999999999996 5666666655544
No 19
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=4.1e-26 Score=169.74 Aligned_cols=129 Identities=36% Similarity=0.538 Sum_probs=118.3
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
...+.++|++|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~----------- 78 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAED-ASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH----------- 78 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-----------
Confidence 4567899999999999999999999999999998 8999999999999999999999999999998885
Q ss_pred hhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 145 ~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..+..+
T Consensus 79 -------~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~ 139 (169)
T 2y1l_E 79 -------AGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHL-EIVEVLLKNGADV 139 (169)
T ss_dssp -------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCCT
T ss_pred -------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCC
Confidence 899999999999999999999999999999999999999999999996 5666666666544
No 20
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=8.1e-27 Score=164.68 Aligned_cols=112 Identities=29% Similarity=0.401 Sum_probs=105.3
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~----------- 71 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTL-EGGRKPLHYAADCGQLEILEFLLLKGADINAPDK----------- 71 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCC-TTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT-----------
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-----------
Confidence 4568899999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred hhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q psy10604 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAAL 195 (225)
Q Consensus 145 ~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~ 195 (225)
.|+||||+|+..++.+++++|+++|++++.+|..|.||||+|..
T Consensus 72 -------~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 72 -------HHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp -------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred -------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 99999999999999999999999999999999999999999954
No 21
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=8.2e-26 Score=182.26 Aligned_cols=149 Identities=23% Similarity=0.261 Sum_probs=125.5
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH-
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ- 141 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~- 141 (225)
..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+..+...+.+
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 146 (299)
T 1s70_B 68 YANVDGLTALHQACIDDNVDMVKFLVENGANINQPD-NEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIA 146 (299)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHH
Confidence 356789999999999999999999999999999998 899999999999999999999999999998877633221111
Q ss_pred -----------hh-hhh-----------------------------hccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy10604 142 -----------LN-IHQ-----------------------------KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVD 180 (225)
Q Consensus 142 -----------~~-~~~-----------------------------~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~ 180 (225)
+. ..+ ...+..|.||||+|+..|+.+++++|+++|++++
T Consensus 147 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~ 226 (299)
T 1s70_B 147 EEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN 226 (299)
T ss_dssp CSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT
T ss_pred HhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 10 000 1134679999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 181 ASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 181 ~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.+|..|.||||+|+..|+. .++++|+..|+.+
T Consensus 227 ~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~gad~ 258 (299)
T 1s70_B 227 IKDYDGWTPLHAAAHWGKE-EACRILVENLCDM 258 (299)
T ss_dssp CCCTTCCCHHHHHHHTTCH-HHHHHHHHTTCCT
T ss_pred CcCCCCCcHHHHHHhcCCH-HHHHHHHHcCCCC
Confidence 9999999999999999996 5667777766654
No 22
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=6.5e-26 Score=165.90 Aligned_cols=125 Identities=30% Similarity=0.409 Sum_probs=114.8
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhhh
Q psy10604 68 PNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQK 147 (225)
Q Consensus 68 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~ 147 (225)
..++||.|+..|+.+++++|++.|.+++ .+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-------------- 65 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TD-WLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK-------------- 65 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CC-TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT--------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------
Confidence 5689999999999999999999999886 34 7899999999999999999999999999998885
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 148 NIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 148 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..|..+
T Consensus 66 ----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~~ 126 (153)
T 1awc_B 66 ----VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQ-EVVELLIKYGADV 126 (153)
T ss_dssp ----TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCCT
T ss_pred ----CCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCc
Confidence 899999999999999999999999999999999999999999999996 5666777666554
No 23
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=6.2e-26 Score=166.29 Aligned_cols=125 Identities=27% Similarity=0.351 Sum_probs=115.7
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ 141 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 141 (225)
...+..|.||||+ +..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 30 ~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-------- 99 (156)
T 1bd8_A 30 DALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQD-TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG-------- 99 (156)
T ss_dssp TCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT--------
T ss_pred cccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC--------
Confidence 3456789999999 99999999999999999999998 8999999999999999999999999999999886
Q ss_pred hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhh
Q psy10604 142 LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAIT 208 (225)
Q Consensus 142 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~ 208 (225)
.|+||||+|+..|+.+++++|+++ ++++.+|..|.||||+|+..|+. .++++|++
T Consensus 100 ----------~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~-~~v~~Ll~ 154 (156)
T 1bd8_A 100 ----------TGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQ-DLVDILQG 154 (156)
T ss_dssp ----------TSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCH-HHHHHHHT
T ss_pred ----------CCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcH-HHHHHHHh
Confidence 899999999999999999999999 99999999999999999999996 55666554
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=1.6e-25 Score=178.71 Aligned_cols=150 Identities=21% Similarity=0.184 Sum_probs=115.0
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC--------------
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDI-------------- 128 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~-------------- 128 (225)
..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++.
T Consensus 40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 118 (282)
T 1oy3_D 40 LQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAE-RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQD 118 (282)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC-TTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccc
Confidence 346789999999999999999999999999999888 78999999999999999999999887652
Q ss_pred ---------------------------------CCCCcch------------hhHHHHhhhhhhcc---C-CCCCcHHHH
Q psy10604 129 ---------------------------------NTSNATS------------KKLDNQLNIHQKNI---K-NNGLNALHL 159 (225)
Q Consensus 129 ---------------------------------~~~~~~~------------~~~~~~~~~~~~~~---d-~~g~t~L~~ 159 (225)
+.++..+ .....++...+..+ + ..|+||||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 198 (282)
T 1oy3_D 119 CTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHL 198 (282)
T ss_dssp -------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH
T ss_pred cCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHH
Confidence 2222211 12334444444433 2 238888888
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCCc
Q psy10604 160 AAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSLP 214 (225)
Q Consensus 160 A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~~ 214 (225)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+. .++++|+..|+.++
T Consensus 199 A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 199 AVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP-ILARLLRAHGAPEP 252 (282)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCH-HHHHHHHHTTCCCC
T ss_pred HHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCc-HHHHHHHHcCCCcC
Confidence 8888888888888888888888888888888888888885 56666666666553
No 25
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=9e-26 Score=180.16 Aligned_cols=149 Identities=19% Similarity=0.203 Sum_probs=125.4
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhh---
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVD---INTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKK--- 137 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~--- 137 (225)
.+.+|.||||+|+..|+.+++++|++.|++ ++..+ ..|.||||+|+..|+.+++++|++.|++++.++..+..
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 83 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQN-DLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALH 83 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 468899999999999999999999999998 77787 89999999999999999999999999999988753322
Q ss_pred ---------HHHHhhhh--------------------------------------------------hhccCCCCCcHHH
Q psy10604 138 ---------LDNQLNIH--------------------------------------------------QKNIKNNGLNALH 158 (225)
Q Consensus 138 ---------~~~~~~~~--------------------------------------------------~~~~d~~g~t~L~ 158 (225)
...++... ....+..|+||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 22222221 2335678999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCC-CChHHHHHHHcCChHHHHHHHhhcCCCCc
Q psy10604 159 LAAKDGHTTVVKALLKGGCKVDASTKK-GNTALHIAALDSLVTDIASSAITDATSLP 214 (225)
Q Consensus 159 ~A~~~~~~~~~~~Ll~~ga~~~~~d~~-g~tpL~~A~~~~~~~~i~~~l~~~~~~~~ 214 (225)
+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+. .++++|+..|+.++
T Consensus 164 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~gad~~ 219 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAA-SVLELLLKAGADPT 219 (282)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCH-HHHHHHHHTTCCTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCH-HHHHHHHHcCCCCc
Confidence 999999999999999999999999865 99999999999996 56667776666553
No 26
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=2e-25 Score=176.38 Aligned_cols=148 Identities=22% Similarity=0.249 Sum_probs=124.1
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCCcchh------
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGV-DINTSNATSK------ 136 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~-~~~~~~~~~~------ 136 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|+ +++..+..+.
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A 131 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEASADANIQD-NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILA 131 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHH
Confidence 36789999999999999999999999999999998 889999999999999999999999987 7777665332
Q ss_pred ------hHHHHhhhhh---hccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHh
Q psy10604 137 ------KLDNQLNIHQ---KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAI 207 (225)
Q Consensus 137 ------~~~~~~~~~~---~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~ 207 (225)
....++...+ +..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+
T Consensus 132 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll 210 (253)
T 1yyh_A 132 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSY-ETAKVLL 210 (253)
T ss_dssp HHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHH
T ss_pred HHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCH-HHHHHHH
Confidence 2334444433 33467899999999999999999999999999999999999999999999996 5666666
Q ss_pred hcCCCC
Q psy10604 208 TDATSL 213 (225)
Q Consensus 208 ~~~~~~ 213 (225)
..|+..
T Consensus 211 ~~ga~~ 216 (253)
T 1yyh_A 211 DHFANR 216 (253)
T ss_dssp HTTCCT
T ss_pred HcCCCc
Confidence 666554
No 27
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=185.83 Aligned_cols=126 Identities=29% Similarity=0.384 Sum_probs=115.0
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHh
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQL 142 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~ 142 (225)
..+.+|.||+|+|+..++.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 114 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d-~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~--------- 183 (269)
T 4b93_B 114 ARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKD-LSGNTPLIYACSGGHHELVALLLQHGASINASNN--------- 183 (269)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-TTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCT---------
T ss_pred ccCCCCCCccccccccChHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCcccc---------
Confidence 357789999999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred hhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHh
Q psy10604 143 NIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAI 207 (225)
Q Consensus 143 ~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~ 207 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.++++-.+.+.+.
T Consensus 184 ---------~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~ 239 (269)
T 4b93_B 184 ---------KGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVP 239 (269)
T ss_dssp ---------TSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC--
T ss_pred ---------CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998876433333333
No 28
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=3.5e-25 Score=172.18 Aligned_cols=147 Identities=27% Similarity=0.316 Sum_probs=100.9
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh--------
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK-------- 136 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~-------- 136 (225)
+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++..+.
T Consensus 37 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 115 (231)
T 3aji_A 37 DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD-DAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAAS 115 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcC-CCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 4556666666666666666666666666666665 5566666666666666666666666666655543221
Q ss_pred ----hHHHHhhhhhh---ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhc
Q psy10604 137 ----KLDNQLNIHQK---NIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITD 209 (225)
Q Consensus 137 ----~~~~~~~~~~~---~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~ 209 (225)
....++...+. ..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..
T Consensus 116 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ 194 (231)
T 3aji_A 116 KNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERV-EEAKFLVTQ 194 (231)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCH-HHHHHHHHC
Confidence 12222322222 2345899999999999999999999999999999999999999999999996 566666666
Q ss_pred CCCC
Q psy10604 210 ATSL 213 (225)
Q Consensus 210 ~~~~ 213 (225)
|+.+
T Consensus 195 ga~~ 198 (231)
T 3aji_A 195 GASI 198 (231)
T ss_dssp TCCS
T ss_pred CCCC
Confidence 6554
No 29
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=3.5e-26 Score=180.81 Aligned_cols=127 Identities=20% Similarity=0.298 Sum_probs=116.3
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC-------------CCCHHHHHHHcCCHHHHHHHHH---CCCC
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASD-------------PNTSFLRAARAGHLDKLRELLE---AGVD 127 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-------------g~t~Lh~A~~~~~~~iv~~Ll~---~g~~ 127 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+ .. |.||||+|+..|+.+++++|++ .|++
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~ 164 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRA-CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS 164 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-CSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc-ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 34679999999999999999999999999999988 44 9999999999999999999999 9999
Q ss_pred CCCCCcchhhHHHHhhhhhhccCCCCCcHHHHHHH--cCCHH-------HHHHHHHCCCCC-------CCCCCCCChHHH
Q psy10604 128 INTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAK--DGHTT-------VVKALLKGGCKV-------DASTKKGNTALH 191 (225)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~--~~~~~-------~~~~Ll~~ga~~-------~~~d~~g~tpL~ 191 (225)
++.++. .|+||||+|+. .++.+ ++++|+++|+++ +.+|..|.||||
T Consensus 165 ~n~~d~------------------~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 165 LEATDS------------------LGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp TTCCCT------------------TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHH
T ss_pred cCccCC------------------CCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHH
Confidence 999886 99999999999 78888 999999999999 899999999999
Q ss_pred HHHHcCChHHHHHHHhhcC
Q psy10604 192 IAALDSLVTDIASSAITDA 210 (225)
Q Consensus 192 ~A~~~~~~~~i~~~l~~~~ 210 (225)
+|+..|+. .++++|++.+
T Consensus 227 ~A~~~g~~-~~v~~Ll~~g 244 (256)
T 2etb_A 227 LAAKEGKI-EIFRHILQRE 244 (256)
T ss_dssp HHHHTTCH-HHHHHHHHHH
T ss_pred HHHHhCCH-HHHHHHHhCC
Confidence 99999996 5666666554
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=4e-25 Score=170.92 Aligned_cols=129 Identities=23% Similarity=0.226 Sum_probs=82.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++
T Consensus 89 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~------------ 155 (223)
T 2f8y_A 89 MHDGTTPLILAARLAVEGMLEDLINSHADVNAVD-DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN------------ 155 (223)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC-TTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC------------
T ss_pred CCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC------------
Confidence 3445555555555555555555555555555554 445555555555555555555555555555444
Q ss_pred hhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 145 ~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+..|+. .++++|++.+...
T Consensus 156 ------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~-~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 156 ------NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHH-DIVRLLDEYNLVR 217 (223)
T ss_dssp ------TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTTCSS
T ss_pred ------CCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcch-HHHHHHHHcCCCc
Confidence 3788888888888888888888888888888888888888888888884 5566666655443
No 31
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=9.1e-26 Score=166.29 Aligned_cols=125 Identities=24% Similarity=0.363 Sum_probs=113.9
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhh
Q psy10604 66 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIH 145 (225)
Q Consensus 66 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~ 145 (225)
+...||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+. |+.+++++|++.|++++.++.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~------------ 68 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQN-GFGRTALQVMKL-GNPEIARRLLLRGANPDLKDR------------ 68 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCC-TTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCT------------
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccC-ccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCC------------
Confidence 346799999999999999999999999999998 899999999999 999999999999999998885
Q ss_pred hhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q psy10604 146 QKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDAT 211 (225)
Q Consensus 146 ~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~ 211 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+ ++++|+..+.
T Consensus 69 ------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~g~ 127 (162)
T 1ihb_A 69 ------TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR-VVEFLVKHTA 127 (162)
T ss_dssp ------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHHHSC
T ss_pred ------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHHccC
Confidence 8999999999999999999999999999999999999999999999975 5555555443
No 32
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=2.3e-25 Score=167.15 Aligned_cols=128 Identities=24% Similarity=0.355 Sum_probs=115.0
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 66 SDPNTSFLRAARAGHLDKLRELLEA-GVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 66 ~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
.++.++||.|+..|+.+++++|++. +.+++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~----------- 70 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGD-DHGFSPLHWACREGRSAVVEMLIMRGARINVMNR----------- 70 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-----------
Confidence 4578899999999999999999998 66788888 8999999999999999999999999999999886
Q ss_pred hhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 145 ~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..++.+
T Consensus 71 -------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~~ 131 (179)
T 3f6q_A 71 -------GDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD-QVAEDLVANGALV 131 (179)
T ss_dssp -------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCCS
T ss_pred -------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHCCCCc
Confidence 899999999999999999999999999999999999999999999996 5666776666554
No 33
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=1.8e-25 Score=165.43 Aligned_cols=129 Identities=26% Similarity=0.350 Sum_probs=115.7
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLE-AGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
+.+|.++||.|+..|+.+++++|++ .+.+++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---------- 73 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIE-GRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK---------- 73 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccc-cCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC----------
Confidence 4668899999999999999999998 455666666 7899999999999999999999999999998886
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..+...
T Consensus 74 --------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~~ 134 (165)
T 3twr_A 74 --------GGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKY-EICKLLLQHGADP 134 (165)
T ss_dssp --------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTTCCT
T ss_pred --------CCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCC
Confidence 899999999999999999999999999999999999999999999996 5666666665544
No 34
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.93 E-value=7.6e-25 Score=170.25 Aligned_cols=146 Identities=26% Similarity=0.354 Sum_probs=115.6
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh--------
Q psy10604 66 SDPNTSFLRAARAGHLDKLRELLEAGVD-INTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK-------- 136 (225)
Q Consensus 66 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~-------- 136 (225)
..+.+|||.|+..|+.+.+++|+..+.. ++..+ ..|.||||+|+..|+.+++++|++.|++++.++..+.
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRTD-QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCC-CCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHH
Confidence 3478999999999999999999998765 45555 8899999999999999999999999999998776322
Q ss_pred ----hHHHHhhhhhhc---cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhc
Q psy10604 137 ----KLDNQLNIHQKN---IKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITD 209 (225)
Q Consensus 137 ----~~~~~~~~~~~~---~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~ 209 (225)
+...++...+.. .|..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+ ++++|+..
T Consensus 83 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~~ 161 (231)
T 3aji_A 83 AGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLK-MVHILLFY 161 (231)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHHT
T ss_pred cCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHhc
Confidence 233344433333 3567888888888888888888888888888888888888888888888864 55555555
Q ss_pred CCCC
Q psy10604 210 ATSL 213 (225)
Q Consensus 210 ~~~~ 213 (225)
+..+
T Consensus 162 g~~~ 165 (231)
T 3aji_A 162 KAST 165 (231)
T ss_dssp TCCS
T ss_pred CCCc
Confidence 4433
No 35
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=2.8e-26 Score=179.17 Aligned_cols=131 Identities=24% Similarity=0.308 Sum_probs=119.3
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHh
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQL 142 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~ 142 (225)
..+.+|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~--------- 85 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPN-EEGITALHNAICGANYSIVDFLITAGANVNSPDS--------- 85 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT---------
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC---------
Confidence 456778999999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred hhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCChHHHHH--HHcCChHHHHHHHhhcCCCC
Q psy10604 143 NIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDAST-KKGNTALHIA--ALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 143 ~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d-~~g~tpL~~A--~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+| +..|+. .++++|+..|+.+
T Consensus 86 ---------~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~-~~v~~Ll~~ga~~ 149 (229)
T 2vge_A 86 ---------HGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYA-DCATYLADVEQSM 149 (229)
T ss_dssp ---------TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHH-HHHHHHHHHHHHT
T ss_pred ---------CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChH-HHHHHHHHcCCCc
Confidence 99999999999999999999999999999986 6999999999 888885 5666666654433
No 36
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=1.5e-24 Score=169.42 Aligned_cols=150 Identities=21% Similarity=0.212 Sum_probs=122.9
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC----CCCCCCcch--
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGV----DINTSNATS-- 135 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~----~~~~~~~~~-- 135 (225)
...+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.++ +++..+..+
T Consensus 40 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t 118 (241)
T 1k1a_A 40 DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD-RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLT 118 (241)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCC
T ss_pred CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCc
Confidence 3356778999999999999999999999999999888 789999999999999999999999887 666555422
Q ss_pred ----------hhHHHHhhhhhhcc---C-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHH
Q psy10604 136 ----------KKLDNQLNIHQKNI---K-NNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTD 201 (225)
Q Consensus 136 ----------~~~~~~~~~~~~~~---d-~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~ 201 (225)
.+...++...+..+ + ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .
T Consensus 119 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~ 197 (241)
T 1k1a_A 119 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLL-P 197 (241)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCH-H
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH-H
Confidence 23444444444443 3 5799999999999999999999999999999999999999999999996 5
Q ss_pred HHHHHhhcCCCC
Q psy10604 202 IASSAITDATSL 213 (225)
Q Consensus 202 i~~~l~~~~~~~ 213 (225)
++++|+..|+..
T Consensus 198 ~v~~Ll~~ga~~ 209 (241)
T 1k1a_A 198 LVRTLVRSGADS 209 (241)
T ss_dssp HHHHHHHTTCCT
T ss_pred HHHHHHhcCCCC
Confidence 666666666554
No 37
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=5e-25 Score=171.49 Aligned_cols=145 Identities=22% Similarity=0.243 Sum_probs=121.7
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDI-----NTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK 136 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~ 136 (225)
...+..|.||||+|+..|+.+++++|++.|+++ +..+ ..|.||||+|+..|+.+++++|++.|++++..+...
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~- 108 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSEL-YEGQTALHIAVINQNVNLVRALLARGASVSARATGS- 108 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTT-TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSG-
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccC-CCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCc-
Confidence 345788999999999999999999999999887 5555 789999999999999999999999999998876421
Q ss_pred hHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHH---HHHHhhcCCC
Q psy10604 137 KLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDI---ASSAITDATS 212 (225)
Q Consensus 137 ~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i---~~~l~~~~~~ 212 (225)
.+.......|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+.+ .++|+..++.
T Consensus 109 ----~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 109 ----VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp ----GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred ----ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 11112233445799999999999999999999999999999999999999999999997544 2666665553
No 38
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=6.1e-25 Score=174.49 Aligned_cols=149 Identities=23% Similarity=0.263 Sum_probs=115.4
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcc-------
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNAT------- 134 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~------- 134 (225)
...+.+|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 30 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A 108 (261)
T 2xai_A 30 NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT-ADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEA 108 (261)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHH
Confidence 3456788999999999999999999999999999888 88999999999999999999999999988754431
Q ss_pred ----hhhHHHHhhhhhhc---cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHh
Q psy10604 135 ----SKKLDNQLNIHQKN---IKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAI 207 (225)
Q Consensus 135 ----~~~~~~~~~~~~~~---~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~ 207 (225)
.......+...+.+ .|..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+. .++++|+
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~-~~v~~Ll 186 (261)
T 2xai_A 109 ARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASE-ELACLLM 186 (261)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCH-HHHHHHH
T ss_pred HHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCH-HHHHHHH
Confidence 11233444444333 356788888888888888888888888888884 77888888888888885 5566666
Q ss_pred hcCCCC
Q psy10604 208 TDATSL 213 (225)
Q Consensus 208 ~~~~~~ 213 (225)
..|+..
T Consensus 187 ~~gad~ 192 (261)
T 2xai_A 187 DFGADT 192 (261)
T ss_dssp HTTCCT
T ss_pred HcCCCC
Confidence 655554
No 39
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=2.2e-25 Score=166.05 Aligned_cols=126 Identities=27% Similarity=0.353 Sum_probs=114.4
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhh
Q psy10604 68 PNTSFLRAARAGHLDKLRELLEAGVD-INTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQ 146 (225)
Q Consensus 68 g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~ 146 (225)
+.+|||.|+..|+.+++++|++.+.+ ++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~------------- 67 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPD-ERGFTPLIWASAFGEIETVRFLLEWGADPHILAK------------- 67 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-------------
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcc-------------
Confidence 46899999999999999999999987 67777 8999999999999999999999999999998886
Q ss_pred hccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 147 KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 147 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..++.+
T Consensus 68 -----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~~ 128 (172)
T 3v30_A 68 -----ERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHV-KCVEALLARGADL 128 (172)
T ss_dssp -----TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCCT
T ss_pred -----cCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCc
Confidence 899999999999999999999999999999999999999999999996 5666666666554
No 40
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=6.7e-25 Score=167.05 Aligned_cols=145 Identities=23% Similarity=0.268 Sum_probs=103.8
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCcchh----
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELL-EAGVDINTSNATSK---- 136 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll-~~g~~~~~~~~~~~---- 136 (225)
...+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+ ..+++++..+..+.
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~ 111 (201)
T 3hra_A 33 DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN-SISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALI 111 (201)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHH
Confidence 3356788999999999999999999999999999988 88999999999999999999999 55778877765211
Q ss_pred --------hHHHHhhhhh----hccCCCCCcHHHHHHHcCC-----HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCh
Q psy10604 137 --------KLDNQLNIHQ----KNIKNNGLNALHLAAKDGH-----TTVVKALLKGGCKVDASTKKGNTALHIAALDSLV 199 (225)
Q Consensus 137 --------~~~~~~~~~~----~~~d~~g~t~L~~A~~~~~-----~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~ 199 (225)
....++...+ +..|..|+||||+|+..+. .+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 112 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 191 (201)
T 3hra_A 112 PAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYT 191 (201)
T ss_dssp HHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH
Confidence 2223333222 2234566677777666665 6666777666777666666677777777666664
Q ss_pred HHHHHHHhh
Q psy10604 200 TDIASSAIT 208 (225)
Q Consensus 200 ~~i~~~l~~ 208 (225)
.++++|++
T Consensus 192 -~~~~~Ll~ 199 (201)
T 3hra_A 192 -EISKILAQ 199 (201)
T ss_dssp -HHHHHHHT
T ss_pred -hHHHHHHh
Confidence 44444444
No 41
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=4.6e-26 Score=180.40 Aligned_cols=128 Identities=20% Similarity=0.181 Sum_probs=115.6
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHH---CCCC
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNA-------------SDPNTSFLRAARAGHLDKLRELLE---AGVD 127 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-------------~~g~t~Lh~A~~~~~~~iv~~Ll~---~g~~ 127 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+. ..|.||||+|+..|+.+++++|++ .|++
T Consensus 89 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~ 168 (260)
T 3jxi_A 89 VYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD 168 (260)
T ss_dssp SSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 345899999999999999999999999999998873 479999999999999999999999 9999
Q ss_pred CCCCCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCC---------HHHHHHHHHCCCCC-------CCCCCCCChHHH
Q psy10604 128 INTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGH---------TTVVKALLKGGCKV-------DASTKKGNTALH 191 (225)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~---------~~~~~~Ll~~ga~~-------~~~d~~g~tpL~ 191 (225)
++.++. .|+||||+|+..++ .+++++|+++|+++ +.+|..|.||||
T Consensus 169 ~~~~d~------------------~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 169 LRRQDS------------------RGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp TTCCCT------------------TSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred CcccCC------------------CCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHH
Confidence 999886 99999999999887 79999999999999 679999999999
Q ss_pred HHHHcCChHHHHHHHhhcC
Q psy10604 192 IAALDSLVTDIASSAITDA 210 (225)
Q Consensus 192 ~A~~~~~~~~i~~~l~~~~ 210 (225)
+|+..|+. .++++|++++
T Consensus 231 ~A~~~g~~-~~v~~Ll~~g 248 (260)
T 3jxi_A 231 MAAKTGKI-GIFQHIIRRE 248 (260)
T ss_dssp HHHHTTCH-HHHHHHHHHH
T ss_pred HHHHcCCH-HHHHHHHHhC
Confidence 99999996 4555555543
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=6.5e-25 Score=170.83 Aligned_cols=129 Identities=19% Similarity=0.232 Sum_probs=116.0
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC------------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNA------------SDPNTSFLRAARAGHLDKLRELLEAGVDINT 130 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~------------~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~ 130 (225)
..+..|.||||+|+..|+.+++++|++.|++++..+. ..|.||||+|+..|+.+++++|++.|++++.
T Consensus 70 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 149 (232)
T 2rfa_A 70 SELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA 149 (232)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred ccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 3467899999999999999999999999999998762 2699999999999999999999999999999
Q ss_pred CCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHH----HHHHHCCCCC------CCCCCCCChHHHHHHHcCChH
Q psy10604 131 SNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVV----KALLKGGCKV------DASTKKGNTALHIAALDSLVT 200 (225)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~----~~Ll~~ga~~------~~~d~~g~tpL~~A~~~~~~~ 200 (225)
++. .|+||||+|+..++.+++ ++|+++|++. +.+|..|.||||+|+..|+.+
T Consensus 150 ~d~------------------~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~ 211 (232)
T 2rfa_A 150 QDS------------------LGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIV 211 (232)
T ss_dssp CCT------------------TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHH
T ss_pred CCC------------------CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHH
Confidence 886 999999999999999988 9999999998 589999999999999999965
Q ss_pred HHHHHHhhcC
Q psy10604 201 DIASSAITDA 210 (225)
Q Consensus 201 ~i~~~l~~~~ 210 (225)
++++|++.+
T Consensus 212 -~v~~Ll~~g 220 (232)
T 2rfa_A 212 -MFQHLMQKR 220 (232)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHhcC
Confidence 555555543
No 43
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=5.5e-25 Score=170.58 Aligned_cols=129 Identities=21% Similarity=0.202 Sum_probs=98.3
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAG--VDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQL 142 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~ 142 (225)
+..|.||||+|+..|+.+++++|++.| ++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 69 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~--------- 138 (228)
T 2dzn_A 69 DDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKIT-NQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK--------- 138 (228)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT---------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCC-cCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCC---------
Confidence 455666666666666666666666666 6666665 5666666666666666666666666666666654
Q ss_pred hhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCChHHHHHHHcCChHHHHHHHh-hcCCCC
Q psy10604 143 NIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGG-CKVDASTKKGNTALHIAALDSLVTDIASSAI-TDATSL 213 (225)
Q Consensus 143 ~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~-~~~~~~ 213 (225)
.|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+ ++++|+ ..|+..
T Consensus 139 ---------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 139 ---------FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD-AAVLLVEKYGAEY 201 (228)
T ss_dssp ---------TSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH-HHHHHHHHHCCCS
T ss_pred ---------CCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHH-HHHHHHHhcCCCC
Confidence 8999999999999999999999999 999999999999999999999965 555555 555544
No 44
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=1.3e-25 Score=179.29 Aligned_cols=129 Identities=22% Similarity=0.256 Sum_probs=115.7
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHH---CCCC
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNA-------------SDPNTSFLRAARAGHLDKLRELLE---AGVD 127 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-------------~~g~t~Lh~A~~~~~~~iv~~Ll~---~g~~ 127 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+. ..|.||||+|+..|+.+++++|++ .|++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad 176 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD 176 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence 456899999999999999999999999999999883 179999999999999999999999 9999
Q ss_pred CCCCCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCC---------HHHHHHHHHCCCCCC-------CCCCCCChHHH
Q psy10604 128 INTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGH---------TTVVKALLKGGCKVD-------ASTKKGNTALH 191 (225)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~---------~~~~~~Ll~~ga~~~-------~~d~~g~tpL~ 191 (225)
++.++. .|+||||+|+..++ .+++++|+++|++++ .+|..|+||||
T Consensus 177 ~~~~d~------------------~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~ 238 (273)
T 2pnn_A 177 ISARDS------------------VGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLA 238 (273)
T ss_dssp TTCCCT------------------TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred ceeeCC------------------CCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHH
Confidence 999886 99999999999988 899999999999997 48999999999
Q ss_pred HHHHcCChHHHHHHHhhcC
Q psy10604 192 IAALDSLVTDIASSAITDA 210 (225)
Q Consensus 192 ~A~~~~~~~~i~~~l~~~~ 210 (225)
+|+..|+.+.+..++-.++
T Consensus 239 ~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 239 LAASSGKIGVLAYILQREI 257 (273)
T ss_dssp HHHHTTCHHHHHHHHHHHT
T ss_pred HHHHhChHHHHHHHHHCCC
Confidence 9999999754444444444
No 45
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=1.7e-24 Score=177.58 Aligned_cols=147 Identities=24% Similarity=0.273 Sum_probs=99.6
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcch---------
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATS--------- 135 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~--------- 135 (225)
+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+..+
T Consensus 88 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~ 166 (351)
T 3utm_A 88 DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMD-LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPT 166 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSS
T ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhh
Confidence 4455666666666666666666666666666555 556666666666666666666666666555433110
Q ss_pred ------------------------------------------------------------hhHHHHhhhhh---hccCCC
Q psy10604 136 ------------------------------------------------------------KKLDNQLNIHQ---KNIKNN 152 (225)
Q Consensus 136 ------------------------------------------------------------~~~~~~~~~~~---~~~d~~ 152 (225)
..+...+...+ +..|..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~ 246 (351)
T 3utm_A 167 PELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKD 246 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTT
T ss_pred hhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCC
Confidence 11222233222 234678
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 153 GLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 153 g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+. .++++|+..|+..
T Consensus 247 g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~gad~ 306 (351)
T 3utm_A 247 FMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHL-QTCRLLLSYGSDP 306 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHTTCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH-HHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999996 5666666666554
No 46
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=1.4e-24 Score=167.79 Aligned_cols=146 Identities=23% Similarity=0.257 Sum_probs=91.0
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCCcchh--------
Q psy10604 66 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGV-DINTSNATSK-------- 136 (225)
Q Consensus 66 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~-~~~~~~~~~~-------- 136 (225)
..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.+. +++..+..+.
T Consensus 23 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 23 RTGETALHLAARYSRSDAAKRLLEASADANIQD-NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH
Confidence 444555555555555555555555555555444 445555555555555555555554443 3333322111
Q ss_pred ----hHHHHhhhhhh---ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhc
Q psy10604 137 ----KLDNQLNIHQK---NIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITD 209 (225)
Q Consensus 137 ----~~~~~~~~~~~---~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~ 209 (225)
....++...+. ..|..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..
T Consensus 102 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ 180 (223)
T 2f8y_A 102 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSY-ETAKVLLDH 180 (223)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH-HHHHHHHHT
T ss_pred hCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCH-HHHHHHHHc
Confidence 12222222221 1235899999999999999999999999999999999999999999999996 556666665
Q ss_pred CCCC
Q psy10604 210 ATSL 213 (225)
Q Consensus 210 ~~~~ 213 (225)
++..
T Consensus 181 ga~~ 184 (223)
T 2f8y_A 181 FANR 184 (223)
T ss_dssp TCCT
T ss_pred CCCC
Confidence 5544
No 47
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=2e-26 Score=173.79 Aligned_cols=115 Identities=32% Similarity=0.413 Sum_probs=108.4
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
+..|.||||+|+..|+.+++++|++ |++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~----------- 107 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDM----------- 107 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCS-----------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-----------
Confidence 4568899999999999999999999 99999998 8999999999999999999999999999998873
Q ss_pred hhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCC
Q psy10604 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSL 198 (225)
Q Consensus 145 ~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~ 198 (225)
..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 108 ------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 108 ------RGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK 155 (183)
T ss_dssp ------SSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH
T ss_pred ------CCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc
Confidence 389999999999999999999999999999999999999999998755
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=2.1e-25 Score=174.23 Aligned_cols=145 Identities=21% Similarity=0.175 Sum_probs=87.0
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC------CCCcc---
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDIN------TSNAT--- 134 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~------~~~~~--- 134 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|+++. ..+..
T Consensus 41 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t 119 (236)
T 1ikn_D 41 QNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRD-FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHT 119 (236)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCC-TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCC
Confidence 45667788888888888888888888888887777 778888888888888888888888776532 22210
Q ss_pred ---------hhhHHHHhhhhhhcc---CC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHH
Q psy10604 135 ---------SKKLDNQLNIHQKNI---KN-NGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTD 201 (225)
Q Consensus 135 ---------~~~~~~~~~~~~~~~---d~-~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~ 201 (225)
......++...+..+ +. .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .
T Consensus 120 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~-~ 198 (236)
T 1ikn_D 120 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPST-R 198 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCH-H
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCch-H
Confidence 011222222222221 12 455555555555555555555555555555555555555555555553 3
Q ss_pred HHHHHhhcC
Q psy10604 202 IASSAITDA 210 (225)
Q Consensus 202 i~~~l~~~~ 210 (225)
++++|+..|
T Consensus 199 ~~~~Ll~~g 207 (236)
T 1ikn_D 199 IQQQLGQLT 207 (236)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHcc
Confidence 344444433
No 49
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=3.5e-25 Score=175.02 Aligned_cols=143 Identities=22% Similarity=0.180 Sum_probs=101.8
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh------
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGV-DINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK------ 136 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~------ 136 (225)
.+..|.||||+|+..|+.+++++|++.|. +++..+ ..|.||||+|+..|+.+++++|++.|++++.++..+.
T Consensus 86 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 164 (253)
T 1yyh_A 86 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWA 164 (253)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC-TTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 34556666666666666666666666665 555555 5666666666666666666666666666665554222
Q ss_pred ------hHHHHhhhhhhc---cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHh
Q psy10604 137 ------KLDNQLNIHQKN---IKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAI 207 (225)
Q Consensus 137 ------~~~~~~~~~~~~---~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~ 207 (225)
....++...+.+ .|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+. .|+.+|.
T Consensus 165 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~-~i~~~l~ 243 (253)
T 1yyh_A 165 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHH-DIVRLLD 243 (253)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCH-HHHHHHH
Confidence 122333333322 346899999999999999999999999999999999999999999999996 5555554
Q ss_pred h
Q psy10604 208 T 208 (225)
Q Consensus 208 ~ 208 (225)
.
T Consensus 244 ~ 244 (253)
T 1yyh_A 244 L 244 (253)
T ss_dssp C
T ss_pred H
Confidence 4
No 50
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=4.6e-26 Score=172.53 Aligned_cols=122 Identities=16% Similarity=0.093 Sum_probs=109.6
Q ss_pred CCCchHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC------HHHHHHHHHCCCCCCCCCcch
Q psy10604 66 SDPNTSFLRAARAGHL----DKLRELLEAGVDINTSNASDPNTSFLRAARAGH------LDKLRELLEAGVDINTSNATS 135 (225)
Q Consensus 66 ~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~------~~iv~~Ll~~g~~~~~~~~~~ 135 (225)
..|.||||+|+..|+. +++++|++.|++++.++ ..|+||||+|+..++ .+++++|++.|++++.++.
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d-~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~-- 112 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRT-KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYK-- 112 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC-TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBG--
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCC--
Confidence 5689999999999985 59999999999999999 899999999999987 5789999999999999986
Q ss_pred hhHHHHhhhhhhccCCCCC-cHHHHHHHcC-----CHHHHHHHHH-CCCCCCCCCCCCChHHHHHHHcCChHHHHHHHh
Q psy10604 136 KKLDNQLNIHQKNIKNNGL-NALHLAAKDG-----HTTVVKALLK-GGCKVDASTKKGNTALHIAALDSLVTDIASSAI 207 (225)
Q Consensus 136 ~~~~~~~~~~~~~~d~~g~-t~L~~A~~~~-----~~~~~~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~ 207 (225)
.|+ ||||+|+..+ ..+++++|+. +|++++.+|..|+||||+|+..|+.+ ++++|.
T Consensus 113 ----------------~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~-~v~~L~ 174 (186)
T 3t8k_A 113 ----------------PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPI-ALKMME 174 (186)
T ss_dssp ----------------GGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHH-HHHHHH
T ss_pred ----------------CcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHH-HHHHHH
Confidence 899 9999999844 4569999999 99999999999999999999999964 444443
No 51
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=8.1e-25 Score=175.39 Aligned_cols=124 Identities=27% Similarity=0.442 Sum_probs=84.6
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCC--------------------------------------CCC
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGV-DINTSNASD--------------------------------------PNT 104 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~--------------------------------------g~t 104 (225)
.+..|.||||+|+..|+.+++++|++.|+ +++..+ .. |.|
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 185 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN-RAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQT 185 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC-CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCC
Confidence 46789999999999999999999999998 777665 44 455
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCCC
Q psy10604 105 SFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLK-GGCKVDAST 183 (225)
Q Consensus 105 ~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~-~ga~~~~~d 183 (225)
|||+|+..|+.+++++|++.|++++.++. .|+||||+|+..|+.+++++|++ .|++++.+|
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~gad~n~~d~------------------~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d 247 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEADVNVQDD------------------DGSTALMCACEHGHKEIAGLLLAVPSCDISLTD 247 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT------------------TSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCC
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCC------------------CCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcC
Confidence 55555555555555555555555555543 66666666666666666666666 566666666
Q ss_pred CCCChHHHHHHHcCChHHHHHHHh
Q psy10604 184 KKGNTALHIAALDSLVTDIASSAI 207 (225)
Q Consensus 184 ~~g~tpL~~A~~~~~~~~i~~~l~ 207 (225)
..|.||||+|+..|+. .++++|+
T Consensus 248 ~~g~TpL~~A~~~g~~-~iv~~Ll 270 (276)
T 4hbd_A 248 RDGSTALMVALDAGQS-EIASMLY 270 (276)
T ss_dssp TTSCCHHHHHHHHTCH-HHHHHHH
T ss_pred CCCCCHHHHHHHcCCH-HHHHHHH
Confidence 6666666666666664 3344433
No 52
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=4e-26 Score=176.96 Aligned_cols=127 Identities=25% Similarity=0.350 Sum_probs=113.3
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCcchhhHHHHhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEA-GVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~~~ 143 (225)
+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++. |++++.++.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~---------- 138 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLD-KAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNK---------- 138 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCT----------
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCC----------
Confidence 4568899999999999999999999999999998 8999999999999999999999999 999999886
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDAT 211 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~ 211 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+ +++.+...++
T Consensus 139 --------~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~-~l~~l~~~~~ 197 (222)
T 3ehr_A 139 --------LGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACAS-LLKKKQGTDA 197 (222)
T ss_dssp --------TSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHH-HHC-------
T ss_pred --------CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHH-HHHHHhccch
Confidence 9999999999999999999999999999999999999999999988864 4444444443
No 53
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=1.9e-24 Score=164.59 Aligned_cols=112 Identities=28% Similarity=0.372 Sum_probs=84.8
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCcch------
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELL-EAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAG-VDINTSNATS------ 135 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g-~~~~~~~~~~------ 135 (225)
.+..|.||||+|+..|+.+++++|+ ..+.+++..+ ..|.||||+|+..|+.+++++|++.| ++++.++..+
T Consensus 68 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~ 146 (201)
T 3hra_A 68 QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHN-RYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIE 146 (201)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC-TTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccCccccccc-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHH
Confidence 4566788888888888888888888 4556777777 77888888888888888888888887 7777666522
Q ss_pred -----------hhHHHHhhhhhhc---cCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy10604 136 -----------KKLDNQLNIHQKN---IKNNGLNALHLAAKDGHTTVVKALLKGG 176 (225)
Q Consensus 136 -----------~~~~~~~~~~~~~---~d~~g~t~L~~A~~~~~~~~~~~Ll~~g 176 (225)
.+....+...+.+ .|..|+||||+|+..|+.+++++|+++|
T Consensus 147 A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 147 AVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 2233444433333 4578999999999999999999999887
No 54
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=1.2e-24 Score=172.85 Aligned_cols=146 Identities=23% Similarity=0.305 Sum_probs=124.3
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh----------
Q psy10604 67 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK---------- 136 (225)
Q Consensus 67 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~---------- 136 (225)
+|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++..+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIIT-ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 58999999999999999999999999999998 8999999999999999999999999999998876332
Q ss_pred --hHHHHhhhhhhcc--CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCC
Q psy10604 137 --KLDNQLNIHQKNI--KNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATS 212 (225)
Q Consensus 137 --~~~~~~~~~~~~~--d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~ 212 (225)
+....+...+..+ +..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..+..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~ 159 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR-ACVKKLLESGAD 159 (261)
T ss_dssp CHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH-HHHHHHHHHTCC
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCH-HHHHHHHHcCCC
Confidence 2444454444443 45689999999999999999999999999999999999999999999996 566666666665
Q ss_pred Cc
Q psy10604 213 LP 214 (225)
Q Consensus 213 ~~ 214 (225)
.+
T Consensus 160 ~~ 161 (261)
T 2xai_A 160 VN 161 (261)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 55
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=3.2e-24 Score=166.24 Aligned_cols=130 Identities=20% Similarity=0.222 Sum_probs=116.2
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcC--CCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCcchhhH
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAG--VDINT-SNASDPNTSFLRAARAGHLDKLRELLEAG--VDINTSNATSKKL 138 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~-~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g--~~~~~~~~~~~~~ 138 (225)
.+..|.||||+|+..|+.+++++|++.| .+++. .+ ..|.||||+|+..|+.+++++|++.| ++++..+.
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~----- 105 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPD-DSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN----- 105 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCC-TTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCT-----
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCc-----
Confidence 4688999999999999999999999999 56655 55 78999999999999999999999998 77777775
Q ss_pred HHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcC-CCC
Q psy10604 139 DNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDA-TSL 213 (225)
Q Consensus 139 ~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~-~~~ 213 (225)
.|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..+ ..+
T Consensus 106 -------------~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~ 167 (228)
T 2dzn_A 106 -------------QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL-KLIELLCGLGKSAV 167 (228)
T ss_dssp -------------TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHTTTCCCS
T ss_pred -------------CCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH-HHHHHHHhcCcccc
Confidence 899999999999999999999999999999999999999999999996 5666666655 443
No 56
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=1.5e-25 Score=180.45 Aligned_cols=148 Identities=14% Similarity=0.161 Sum_probs=127.5
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcch-hh--------
Q psy10604 67 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATS-KK-------- 137 (225)
Q Consensus 67 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~-~~-------- 137 (225)
+|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++..+ ..
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFD-DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Confidence 58999999999999999999999999999998 899999999999999999999999999999887654 22
Q ss_pred ----HHHHhhhhhhcc-CC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChH-HHHHHHcCChHHHHHHHhhcC
Q psy10604 138 ----LDNQLNIHQKNI-KN-NGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTA-LHIAALDSLVTDIASSAITDA 210 (225)
Q Consensus 138 ----~~~~~~~~~~~~-d~-~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tp-L~~A~~~~~~~~i~~~l~~~~ 210 (225)
...++...+... +. .|+||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..|+. .++++|+..|
T Consensus 140 ~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~-~~v~~Ll~~g 218 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDI-EMLQALFKYD 218 (285)
T ss_dssp TCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCH-HHHHHHTTSC
T ss_pred CCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCH-HHHHHHHHcC
Confidence 333344333333 33 78999999999999999999999999999999999998 9999999995 6778888888
Q ss_pred CCCchH
Q psy10604 211 TSLPCS 216 (225)
Q Consensus 211 ~~~~~~ 216 (225)
+..+..
T Consensus 219 ad~~~~ 224 (285)
T 3kea_A 219 INIYSA 224 (285)
T ss_dssp BCSTTT
T ss_pred CCCCCC
Confidence 777554
No 57
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=3.2e-25 Score=178.51 Aligned_cols=127 Identities=21% Similarity=0.211 Sum_probs=105.4
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ 141 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 141 (225)
...+..|.||||+|+..|+.+++++|++.|++++..+ |.||||+|+..|+.+++++|++.|++++.++.
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-------- 93 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLEDTKIVKILLFSGLDDSQFDD-------- 93 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT---TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCT--------
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC---CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC--------
Confidence 4457889999999999999999999999999998874 89999999999999999999999999998886
Q ss_pred hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-ChHHHHHHHcCChHHHHHHHhhcC
Q psy10604 142 LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKG-NTALHIAALDSLVTDIASSAITDA 210 (225)
Q Consensus 142 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g-~tpL~~A~~~~~~~~i~~~l~~~~ 210 (225)
.|+||||+|+..|+.+++++|+++|++++.++..| .||||+|+..|+. .++++|+..+
T Consensus 94 ----------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~-~~v~~Ll~~g 152 (285)
T 3kea_A 94 ----------KGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDV-SIVSYFLSEI 152 (285)
T ss_dssp ----------TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCH-HHHHHHHTTS
T ss_pred ----------CCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCH-HHHHHHHhCC
Confidence 77777777777777777777777777777777777 6777777777775 3444444444
No 58
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=3.6e-25 Score=183.56 Aligned_cols=128 Identities=15% Similarity=0.222 Sum_probs=118.2
Q ss_pred cCCCCchHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCcchh
Q psy10604 64 CYSDPNTSFLRAARAG--HLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVD-----INTSNATSK 136 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~-----~~~~~~~~~ 136 (225)
.+..|.||||+|+..| +.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++ ++..+.
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~--- 209 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD-KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK--- 209 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCT---
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCC---
Confidence 4567999999999999 9999999999999999998 8999999999999999999999999998 887775
Q ss_pred hHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q psy10604 137 KLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDAT 211 (225)
Q Consensus 137 ~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~ 211 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..++
T Consensus 210 ---------------~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~-~~v~~Ll~~~~ 268 (364)
T 3ljn_A 210 ---------------QGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMV-LLTKELLQKTD 268 (364)
T ss_dssp ---------------TCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCH-HHHHHHHHHSC
T ss_pred ---------------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChH-HHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999999996 56666666543
No 59
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=1.2e-25 Score=176.37 Aligned_cols=128 Identities=23% Similarity=0.264 Sum_probs=114.7
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~----------- 101 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPN-DEGITALHNAVCAGHTEIVKFLVQFGVNVNAADS----------- 101 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCC-TTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-----------
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-----------
Confidence 4668999999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred hhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-hHHHHH--HHcCChHHHHHHHhhcCCC
Q psy10604 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGN-TALHIA--ALDSLVTDIASSAITDATS 212 (225)
Q Consensus 145 ~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~-tpL~~A--~~~~~~~~i~~~l~~~~~~ 212 (225)
.|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..|+. .++++|+..++.
T Consensus 102 -------~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~-~~~~~Ll~~~a~ 164 (239)
T 1ycs_B 102 -------DGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT-QCSQFLYGVQEK 164 (239)
T ss_dssp -------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCC-CHHHHHHHHHHH
T ss_pred -------CCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccH-HHHHHHHHhhhc
Confidence 999999999999999999999999999999998887 999999 778886 455566554433
No 60
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.93 E-value=2.6e-24 Score=173.17 Aligned_cols=147 Identities=22% Similarity=0.273 Sum_probs=96.9
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcc---------
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNAT--------- 134 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~--------- 134 (225)
.+.+|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+..
T Consensus 88 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~ 166 (285)
T 3d9h_A 88 ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT-ADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAAR 166 (285)
T ss_dssp ECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHH
T ss_pred cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Confidence 45667777777777777777777777777777776 67777777777777777777777777776644321
Q ss_pred --hhhHHHHhhhhhhc---cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhc
Q psy10604 135 --SKKLDNQLNIHQKN---IKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITD 209 (225)
Q Consensus 135 --~~~~~~~~~~~~~~---~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~ 209 (225)
......++...+.+ .|..|+||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+. .++++|+..
T Consensus 167 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~-~~v~~Ll~~ 244 (285)
T 3d9h_A 167 RGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASE-ELACLLMDF 244 (285)
T ss_dssp HTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCH-HHHHHHHHT
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCH-HHHHHHHHC
Confidence 11233333333322 345677777777777777777777777777763 66677777777777774 455555555
Q ss_pred CCCC
Q psy10604 210 ATSL 213 (225)
Q Consensus 210 ~~~~ 213 (225)
|+.+
T Consensus 245 gad~ 248 (285)
T 3d9h_A 245 GADT 248 (285)
T ss_dssp TCCT
T ss_pred CCCC
Confidence 5443
No 61
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=2.4e-24 Score=176.85 Aligned_cols=148 Identities=22% Similarity=0.219 Sum_probs=120.1
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHH------
Q psy10604 66 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLD------ 139 (225)
Q Consensus 66 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~------ 139 (225)
.+|.|+||.|+..|++++|++||++|++++.++...|+||||+|+..|+.+++++|+++|++++.++.......
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 34789999999999999999999999999998856799999999999999999999999999998876332211
Q ss_pred ------HHhh---hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCC----------CCCCChHHHHHHHcCChH
Q psy10604 140 ------NQLN---IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDAS----------TKKGNTALHIAALDSLVT 200 (225)
Q Consensus 140 ------~~~~---~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~----------d~~g~tpL~~A~~~~~~~ 200 (225)
..+. ...+..|..|+||||+|+..|+.+++++|+.+|++++.. +..|.||||+|+..|+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 1111 122445789999999999999999999999999998754 456899999999999975
Q ss_pred HHHHHHhhcCCCC
Q psy10604 201 DIASSAITDATSL 213 (225)
Q Consensus 201 ~i~~~l~~~~~~~ 213 (225)
.+..+|-+.++.+
T Consensus 183 ~v~~LL~~~gad~ 195 (337)
T 4g8k_A 183 VLKILLDEMGADV 195 (337)
T ss_dssp HHHHHHHHSCCCT
T ss_pred HHHHHHhccCCCc
Confidence 5444443445443
No 62
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=3.3e-24 Score=167.23 Aligned_cols=149 Identities=27% Similarity=0.401 Sum_probs=113.5
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh-------
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK------- 136 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~------- 136 (225)
.+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++..+.
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 85 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCS-EDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAA 85 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccC-CCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Confidence 35667777777777777777777777777777776 6777777777777777777777777777766554222
Q ss_pred -----hHHHHhhhhh----hccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHh
Q psy10604 137 -----KLDNQLNIHQ----KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAI 207 (225)
Q Consensus 137 -----~~~~~~~~~~----~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~ 207 (225)
+...++...+ ...+..|+||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+. .++++|+
T Consensus 86 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll 164 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV-DIAEILL 164 (237)
T ss_dssp HTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH-HHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH-HHHHHHH
Confidence 2223333222 22456899999999999999999999999999999999999999999999995 5777777
Q ss_pred hcCCCCc
Q psy10604 208 TDATSLP 214 (225)
Q Consensus 208 ~~~~~~~ 214 (225)
..+..++
T Consensus 165 ~~g~~~~ 171 (237)
T 3b7b_A 165 AAKCDLH 171 (237)
T ss_dssp TTTCCTT
T ss_pred HcCCCCC
Confidence 7776654
No 63
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=4.5e-24 Score=166.46 Aligned_cols=147 Identities=26% Similarity=0.398 Sum_probs=102.3
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCcchh-------
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAG-VDINTSNATSK------- 136 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g-~~~~~~~~~~~------- 136 (225)
+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.| .+++..+..+.
T Consensus 41 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~ 119 (237)
T 3b7b_A 41 SEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKD-AEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWAT 119 (237)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCC-TTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHH
Confidence 4556666666666666666666666666666665 56666666666666666666666665 55554443211
Q ss_pred -----hHHHHhhhhhhc---cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhh
Q psy10604 137 -----KLDNQLNIHQKN---IKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAIT 208 (225)
Q Consensus 137 -----~~~~~~~~~~~~---~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~ 208 (225)
....++...+.. .+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+.
T Consensus 120 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~ 198 (237)
T 3b7b_A 120 EYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRY-DCVVLFLS 198 (237)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHT
T ss_pred HcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCH-hHHHHHHH
Confidence 223333333322 345899999999999999999999999999999999999999999999996 45566666
Q ss_pred cCCCC
Q psy10604 209 DATSL 213 (225)
Q Consensus 209 ~~~~~ 213 (225)
.|+.+
T Consensus 199 ~gad~ 203 (237)
T 3b7b_A 199 RDSDV 203 (237)
T ss_dssp TTCCT
T ss_pred cCCCC
Confidence 55544
No 64
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=4e-25 Score=174.70 Aligned_cols=142 Identities=22% Similarity=0.207 Sum_probs=115.5
Q ss_pred cCCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCC----------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy10604 64 CYSDPNTSFLRAARA---GHLDKLRELLEAGVDINTSN----------ASDPNTSFLRAARAGHLDKLRELLEAGVDINT 130 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~----------~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~ 130 (225)
.+..|.||||+|+.. |+.+++++|++.|++++..+ +..|.||||+|+..|+.+++++|++.|++++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 478899999999999 99999999999988776322 15799999999999999999999999999998
Q ss_pred CCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCChHHHHHHH--cCChH-----
Q psy10604 131 SNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLK---GGCKVDASTKKGNTALHIAAL--DSLVT----- 200 (225)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~---~ga~~~~~d~~g~tpL~~A~~--~~~~~----- 200 (225)
++.... +.......|..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+
T Consensus 119 ~~~~~~-----~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~ 193 (256)
T 2etb_A 119 RACGRF-----FQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALV 193 (256)
T ss_dssp CCCSGG-----GSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHH
T ss_pred cccccc-----ccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHH
Confidence 875110 000000111239999999999999999999999 999999999999999999998 77754
Q ss_pred -HHHHHHhhcC
Q psy10604 201 -DIASSAITDA 210 (225)
Q Consensus 201 -~i~~~l~~~~ 210 (225)
.++++|+..|
T Consensus 194 ~~iv~~Ll~~g 204 (256)
T 2etb_A 194 IHMYDGLLQMG 204 (256)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHcC
Confidence 2666666543
No 65
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=1.6e-24 Score=158.74 Aligned_cols=121 Identities=23% Similarity=0.318 Sum_probs=111.7
Q ss_pred CchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhh
Q psy10604 68 PNTSFLRAARAGHLDKLRELLEA-GVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQ 146 (225)
Q Consensus 68 g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~ 146 (225)
+.|+||+|+..|+.+++++|++. +.+++..+ ..|.||||+ +..|+.+++++|++.|++++.++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~------------- 66 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTALQV-MMFGSTAIALELLKQGASPNVQDT------------- 66 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCC-TTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCT-------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccC-CCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCC-------------
Confidence 56899999999999999999998 44888888 899999999 999999999999999999998886
Q ss_pred hccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhc
Q psy10604 147 KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITD 209 (225)
Q Consensus 147 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~ 209 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..
T Consensus 67 -----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ 123 (156)
T 1bd8_A 67 -----SGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHT-AVVSFLAAE 123 (156)
T ss_dssp -----TSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCH-HHHHHHHTT
T ss_pred -----CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChH-HHHHHHHhc
Confidence 899999999999999999999999999999999999999999999996 556666654
No 66
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.92 E-value=7.1e-25 Score=171.26 Aligned_cols=115 Identities=17% Similarity=0.163 Sum_probs=87.4
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+...|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 113 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~---------- 182 (236)
T 1ikn_D 113 TNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTY---------- 182 (236)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCT----------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccC----------
Confidence 3455677777777777777777777777777766622677777777777777777777777777776664
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCChHHHHHHHc
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVD--ASTKKGNTALHIAALD 196 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~--~~d~~g~tpL~~A~~~ 196 (225)
.|+||||+|+..++.+++++|+++|++.. .++..|.||.+.+...
T Consensus 183 --------~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 183 --------QGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp --------TCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred --------CCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence 89999999999999999999999999875 8899999998765543
No 67
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=6.6e-25 Score=172.89 Aligned_cols=112 Identities=33% Similarity=0.448 Sum_probs=105.8
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
+..|.||||+|+..|+.+++++|++ |++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~----------- 108 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVD-ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDM----------- 108 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBC-TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCS-----------
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCC-----------
Confidence 3468999999999999999999999 99999998 8999999999999999999999999999998873
Q ss_pred hhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q psy10604 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAAL 195 (225)
Q Consensus 145 ~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~ 195 (225)
..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 109 ------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 109 ------RGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp ------SSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 389999999999999999999999999999999999999999984
No 68
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.92 E-value=4.3e-24 Score=171.86 Aligned_cols=152 Identities=22% Similarity=0.275 Sum_probs=129.8
Q ss_pred CcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh----
Q psy10604 61 CYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK---- 136 (225)
Q Consensus 61 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~---- 136 (225)
....+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++..+.
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~ 130 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIIT-ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLF 130 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEEC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 34467889999999999999999999999999999998 8999999999999999999999999999998876332
Q ss_pred --------hHHHHhhhhhhcc--CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHH
Q psy10604 137 --------KLDNQLNIHQKNI--KNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSA 206 (225)
Q Consensus 137 --------~~~~~~~~~~~~~--d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l 206 (225)
.....+...+..+ +..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~-~~v~~L 209 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR-ACVKKL 209 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH-HHHHHH
T ss_pred HHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH-HHHHHH
Confidence 2344444444443 45699999999999999999999999999999999999999999999996 566666
Q ss_pred hhcCCCCc
Q psy10604 207 ITDATSLP 214 (225)
Q Consensus 207 ~~~~~~~~ 214 (225)
+..+..++
T Consensus 210 l~~ga~~~ 217 (285)
T 3d9h_A 210 LESGADVN 217 (285)
T ss_dssp HHTTCCTT
T ss_pred HHCCCCCC
Confidence 66665553
No 69
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.92 E-value=7.9e-25 Score=176.46 Aligned_cols=131 Identities=28% Similarity=0.413 Sum_probs=120.0
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
.+.+|.||||.|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~---------- 104 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYAN-VDGLTALHQACIDDNVDMVKFLVENGANINQPDN---------- 104 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC----------
Confidence 45678899999999999999999999999999998 8999999999999999999999999999998886
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.+.+..++...+...
T Consensus 105 --------~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~ 166 (299)
T 1s70_B 105 --------EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166 (299)
T ss_dssp --------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCH
T ss_pred --------CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCc
Confidence 89999999999999999999999999999999999999999999998766666665555443
No 70
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=2.5e-24 Score=182.55 Aligned_cols=128 Identities=34% Similarity=0.433 Sum_probs=75.4
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 44 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~----------- 111 (437)
T 1n11_A 44 NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA-KDDQTPLHCAARIGHTNMVKLLLENNANPNLATT----------- 111 (437)
T ss_dssp SSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCC-TTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-----------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCC-----------
Confidence 3344455555555555555555555555555444 4455555555555555555555555555544443
Q ss_pred hhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCC
Q psy10604 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATS 212 (225)
Q Consensus 145 ~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~ 212 (225)
.|.||||+|+..|+.+++++|+++|++.+..+..|.||||+|+..|+. .++++|+..+..
T Consensus 112 -------~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~ 171 (437)
T 1n11_A 112 -------AGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKV-RVAELLLERDAH 171 (437)
T ss_dssp -------TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCC
T ss_pred -------CCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCH-HHHHHHHhCCCC
Confidence 677777777777777777777777777777777777777777777775 445555554443
No 71
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.92 E-value=7.6e-24 Score=165.34 Aligned_cols=149 Identities=21% Similarity=0.254 Sum_probs=125.3
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHH----cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh---
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLE----AGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK--- 136 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~--- 136 (225)
.+.+|.||||+|+..|+.+++++|++ .|.+++..+ ..|.||||+|+..|+.+++++|++.|++++.++..+.
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 83 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN-NLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA 83 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCccc-ccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 46889999999999999999999997 799999998 8999999999999999999999999999988775332
Q ss_pred ---------hHHHHhhhhh-------hccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCChHHHHHHHcCCh
Q psy10604 137 ---------KLDNQLNIHQ-------KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDAST-KKGNTALHIAALDSLV 199 (225)
Q Consensus 137 ---------~~~~~~~~~~-------~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d-~~g~tpL~~A~~~~~~ 199 (225)
.....+...+ ...+..|+||||+|+..++.+++++|+++|++++..+ ..|.||||+|+..|+.
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCH
Confidence 2333333332 3346789999999999999999999999999999998 7899999999999996
Q ss_pred HHHHHHHhhcCCCCc
Q psy10604 200 TDIASSAITDATSLP 214 (225)
Q Consensus 200 ~~i~~~l~~~~~~~~ 214 (225)
.++++|+..+..++
T Consensus 164 -~~v~~Ll~~g~~~~ 177 (241)
T 1k1a_A 164 -SMVQLLLQHGANVN 177 (241)
T ss_dssp -HHHHHHHHTTCCTT
T ss_pred -HHHHHHHHcCCCCC
Confidence 56667777666654
No 72
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=6.5e-24 Score=179.97 Aligned_cols=148 Identities=27% Similarity=0.302 Sum_probs=113.6
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh-------
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK------- 136 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~------- 136 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+..+.
T Consensus 208 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~ 286 (437)
T 1n11_A 208 PAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES-VQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVA 286 (437)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Confidence 45667888888888888888888888888888777 7788888888888888888888888888777665322
Q ss_pred -----hHHHHhhhhhh---ccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhh
Q psy10604 137 -----KLDNQLNIHQK---NIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAIT 208 (225)
Q Consensus 137 -----~~~~~~~~~~~---~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~ 208 (225)
.....+...+. ..|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+. .++++|+.
T Consensus 287 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~-~iv~~Ll~ 365 (437)
T 1n11_A 287 QEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT-DIVTLLLK 365 (437)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHH
T ss_pred HcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChH-HHHHHHHH
Confidence 23333433333 3356789999999999999999999999999999999999999999999985 56666666
Q ss_pred cCCCC
Q psy10604 209 DATSL 213 (225)
Q Consensus 209 ~~~~~ 213 (225)
.|+..
T Consensus 366 ~ga~~ 370 (437)
T 1n11_A 366 NGASP 370 (437)
T ss_dssp TTCCS
T ss_pred CcCCC
Confidence 65544
No 73
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=9.7e-24 Score=168.15 Aligned_cols=132 Identities=27% Similarity=0.391 Sum_probs=123.2
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHCCCCCCCCCcchhhHH
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEA-GVDINTSNASDPNTSFLRAARAGH----LDKLRELLEAGVDINTSNATSKKLD 139 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~Lh~A~~~~~----~~iv~~Ll~~g~~~~~~~~~~~~~~ 139 (225)
+..|.||||+|+..|+.+++++|++. |++++..+ ..|.||||+|+..++ .+++++|++.|++++.++.
T Consensus 145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~------ 217 (285)
T 1wdy_A 145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACD-NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE------ 217 (285)
T ss_dssp TCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCT------
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccC-CCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCC------
Confidence 57789999999999999999999997 99999998 899999999999999 9999999999999999886
Q ss_pred HHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCCchH
Q psy10604 140 NQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLK-GGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSLPCS 216 (225)
Q Consensus 140 ~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~~~~ 216 (225)
.|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+. .++++|+..|+..++.
T Consensus 218 ------------~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~-~i~~~Ll~~Ga~~~~~ 282 (285)
T 1wdy_A 218 ------------RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLK-KIAELLCKRGASTDCG 282 (285)
T ss_dssp ------------TSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHSSCSCCS
T ss_pred ------------CCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcH-HHHHHHHHcCCCCCcc
Confidence 89999999999999999999999 7999999999999999999999995 6788888888877653
No 74
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=2.1e-23 Score=162.30 Aligned_cols=148 Identities=25% Similarity=0.301 Sum_probs=122.2
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhh-------
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKK------- 137 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~------- 137 (225)
+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+..+..
T Consensus 73 ~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~ 151 (240)
T 3eu9_A 73 GDLNSTPLHWATRQGHLSMVVQLMKYGADPSLID-GEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAY 151 (240)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHH
Confidence 4558999999999999999999999999999988 88999999999999999999999999999887764332
Q ss_pred ------HHHHhhhhhhcc---CC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHh
Q psy10604 138 ------LDNQLNIHQKNI---KN-NGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAI 207 (225)
Q Consensus 138 ------~~~~~~~~~~~~---d~-~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~ 207 (225)
....+...+..+ +. .|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+. .++++|+
T Consensus 152 ~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~-~~v~~L~ 230 (240)
T 3eu9_A 152 RTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNV-WMINHLQ 230 (240)
T ss_dssp HCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCH-HHHHHHH
T ss_pred hCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcH-HHHHHHH
Confidence 222333333332 33 788999999999999999999999999999999999999999999995 6777777
Q ss_pred hcCCCCc
Q psy10604 208 TDATSLP 214 (225)
Q Consensus 208 ~~~~~~~ 214 (225)
..++...
T Consensus 231 ~~~~~~~ 237 (240)
T 3eu9_A 231 EARQAKG 237 (240)
T ss_dssp HHC----
T ss_pred HhhhccC
Confidence 7665544
No 75
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=2.8e-23 Score=170.35 Aligned_cols=151 Identities=21% Similarity=0.230 Sum_probs=126.1
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh-----
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK----- 136 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~----- 136 (225)
...+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+..+.
T Consensus 52 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~ 130 (351)
T 3utm_A 52 HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKD-KGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHE 130 (351)
T ss_dssp CCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 3457789999999999999999999999999999998 8999999999999999999999999999998875332
Q ss_pred -------hHHHHhhhhhhc---------------------------------------------------------cCCC
Q psy10604 137 -------KLDNQLNIHQKN---------------------------------------------------------IKNN 152 (225)
Q Consensus 137 -------~~~~~~~~~~~~---------------------------------------------------------~d~~ 152 (225)
+...++...+.. .+..
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 210 (351)
T 3utm_A 131 AASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTT
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCC
Confidence 233333333322 2356
Q ss_pred CCcHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCCc
Q psy10604 153 GLNALHLAAKD---GHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSLP 214 (225)
Q Consensus 153 g~t~L~~A~~~---~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~~ 214 (225)
|.||||+|+.. +..+++++|+++|++++.+|..|+||||+|+..|+. .++++|+..+..++
T Consensus 211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~ga~~n 274 (351)
T 3utm_A 211 HETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHN-DVMEVLHKHGAKMN 274 (351)
T ss_dssp CCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTTCCTT
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCH-HHHHHHHHCCCCCC
Confidence 78999999998 558999999999999999999999999999999996 56777777666553
No 76
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=3.3e-24 Score=177.81 Aligned_cols=142 Identities=23% Similarity=0.183 Sum_probs=87.4
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcch---------
Q psy10604 65 YSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATS--------- 135 (225)
Q Consensus 65 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~--------- 135 (225)
+.+|.||||+|+..|+.++|++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++..+...
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g 95 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQN-RFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMAN 95 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcC
Confidence 4556777777777777777777777777777766 667777777777777777777777776655432211
Q ss_pred -hhHHHHhhhh----hhc--------------------cCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCCCCCCCCCh
Q psy10604 136 -KKLDNQLNIH----QKN--------------------IKNNGLNALHLAAKDG--HTTVVKALLKGGCKVDASTKKGNT 188 (225)
Q Consensus 136 -~~~~~~~~~~----~~~--------------------~d~~g~t~L~~A~~~~--~~~~~~~Ll~~ga~~~~~d~~g~t 188 (225)
......+... +.. .|..|.||||+|+..| +.+++++|+++|++++.+|..|.|
T Consensus 96 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t 175 (364)
T 3ljn_A 96 KTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADET 175 (364)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred CHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCC
Confidence 1122222222 110 3445666777776666 666777776666666666666667
Q ss_pred HHHHHHHcCChHHHHHHHhh
Q psy10604 189 ALHIAALDSLVTDIASSAIT 208 (225)
Q Consensus 189 pL~~A~~~~~~~~i~~~l~~ 208 (225)
|||+|+..|+. .++++|+.
T Consensus 176 ~L~~A~~~g~~-~~v~~Ll~ 194 (364)
T 3ljn_A 176 PLMRAMEFRNR-EALDLMMD 194 (364)
T ss_dssp HHHHHHHTTCH-HHHHHHHH
T ss_pred HHHHHHHcCCH-HHHHHHHh
Confidence 77766666664 34444443
No 77
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=1.1e-23 Score=167.83 Aligned_cols=128 Identities=24% Similarity=0.304 Sum_probs=117.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhh
Q psy10604 67 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQ 146 (225)
Q Consensus 67 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~ 146 (225)
+|.|+||+|+..|+.+++++|++.|++++...+..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~------------- 70 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKK------------- 70 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-------------
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-------------
Confidence 4789999999999999999999999999988548899999999999999999999999999998885
Q ss_pred hccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 147 KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 147 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..+...
T Consensus 71 -----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~g~~~ 131 (285)
T 1wdy_A 71 -----NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV-KALKFLYKRGANV 131 (285)
T ss_dssp -----TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCH-HHHHHHHHTTCCT
T ss_pred -----CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCH-HHHHHHHHhCCCc
Confidence 899999999999999999999999999999999999999999999996 5666666655443
No 78
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.91 E-value=8.9e-24 Score=176.18 Aligned_cols=151 Identities=22% Similarity=0.257 Sum_probs=124.5
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCCCcc----
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAG---VDINTSNAT---- 134 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g---~~~~~~~~~---- 134 (225)
...+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.+ ++++..+..
T Consensus 160 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~ 238 (373)
T 2fo1_E 160 NAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN-KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTA 238 (373)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCH
T ss_pred cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccC-CCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCH
Confidence 3457789999999999999999999999999999998 89999999999999999999999887 677766552
Q ss_pred -----------hhhHHHHhhhhhhcc-----------CCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCChHHH
Q psy10604 135 -----------SKKLDNQLNIHQKNI-----------KNNGLNALHLAAKDGHTTVVKALLKGG-CKVDASTKKGNTALH 191 (225)
Q Consensus 135 -----------~~~~~~~~~~~~~~~-----------d~~g~t~L~~A~~~~~~~~~~~Ll~~g-a~~~~~d~~g~tpL~ 191 (225)
......++...+..+ |..|+||||+|+..|+.+++++|+++| ++++.+|..|.||||
T Consensus 239 L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~ 318 (373)
T 2fo1_E 239 LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM 318 (373)
T ss_dssp HHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHH
T ss_pred HHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHH
Confidence 233444555555443 347899999999999999999999775 999999999999999
Q ss_pred HHHHcCChHHHHHHHhhcCCCCc
Q psy10604 192 IAALDSLVTDIASSAITDATSLP 214 (225)
Q Consensus 192 ~A~~~~~~~~i~~~l~~~~~~~~ 214 (225)
+|+..|+. .++++|+..|+.++
T Consensus 319 ~A~~~g~~-~iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 319 LAAQEGRI-EVVMYLIQQGASVE 340 (373)
T ss_dssp HHHHHTCH-HHHHHHHHTTCCSS
T ss_pred HHHHcCCH-HHHHHHHHcCCCcc
Confidence 99999996 56666766666553
No 79
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=6.6e-24 Score=142.46 Aligned_cols=93 Identities=46% Similarity=0.709 Sum_probs=88.3
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhh
Q psy10604 67 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQ 146 (225)
Q Consensus 67 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~ 146 (225)
+|.||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~------------- 66 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK------------- 66 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-------------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-------------
Confidence 48899999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred hccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy10604 147 KNIKNNGLNALHLAAKDGHTTVVKALLKGGCK 178 (225)
Q Consensus 147 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~ 178 (225)
.|+||||+|+..|+.+++++|+++|++
T Consensus 67 -----~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 67 -----NGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp -----TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -----CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 899999999999999999999999985
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=9.9e-25 Score=171.22 Aligned_cols=127 Identities=24% Similarity=0.310 Sum_probs=86.2
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhh
Q psy10604 66 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIH 145 (225)
Q Consensus 66 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~ 145 (225)
..|.||||.|+..|+.+.++.|+++|++++.. ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~--~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~------------ 68 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN--PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND------------ 68 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT------------
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC--chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC------------
Confidence 45899999999999999999999999999864 5789999999999999999999999999999886
Q ss_pred hhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 146 QKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 146 ~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+. .++++|+..++.+
T Consensus 69 ------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~ga~~ 129 (239)
T 1ycs_B 69 ------EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV-QVCKFLVESGAAV 129 (239)
T ss_dssp ------TSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTTCCT
T ss_pred ------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCc
Confidence 899999999999999999999999999999999999999999999996 5666776666554
No 81
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.91 E-value=1.5e-23 Score=181.01 Aligned_cols=132 Identities=20% Similarity=0.209 Sum_probs=116.2
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCC------CCCCCCCHHHHHHH---cCCHHHHHHHHHCCCCCCCCCcchhhH
Q psy10604 68 PNTSFLRAARAGHLDKLRELLEAGVDINTS------NASDPNTSFLRAAR---AGHLDKLRELLEAGVDINTSNATSKKL 138 (225)
Q Consensus 68 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~------~~~~g~t~Lh~A~~---~~~~~iv~~Ll~~g~~~~~~~~~~~~~ 138 (225)
..+.||.|+..|+.+.++.|++.|++++.. + ..|.||||+||. .|+.+++++|++.|++++.++.
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~-~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~----- 205 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQ-APEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA----- 205 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSC-CSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCS-----
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccc-cccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCC-----
Confidence 347899999999999999999999999877 5 789999999977 8999999999999999999986
Q ss_pred HHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCCchHHH
Q psy10604 139 DNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSLPCSVI 218 (225)
Q Consensus 139 ~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~~~~~~ 218 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..|+..+...+
T Consensus 206 -------------~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-~~~~~Ll~~ga~~~~~~~ 271 (497)
T 3lvq_E 206 -------------DGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHK-ECEELLEQAQAGTFAFPL 271 (497)
T ss_dssp -------------SSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCH-HHHHHHHHTCC-------
T ss_pred -------------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHhCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999995 677788888877766544
Q ss_pred H
Q psy10604 219 L 219 (225)
Q Consensus 219 ~ 219 (225)
.
T Consensus 272 h 272 (497)
T 3lvq_E 272 H 272 (497)
T ss_dssp -
T ss_pred e
Confidence 3
No 82
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=2.9e-24 Score=169.99 Aligned_cols=141 Identities=19% Similarity=0.142 Sum_probs=111.3
Q ss_pred CCCCchHHHHHH---HcCCHHHHHHHHHcCCC-----------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy10604 65 YSDPNTSFLRAA---RAGHLDKLRELLEAGVD-----------INTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINT 130 (225)
Q Consensus 65 ~~~g~t~L~~A~---~~g~~~~v~~Ll~~g~~-----------~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~ 130 (225)
+..|.||||+|+ ..|+.+++++|++.|++ ++..+ ..|.||||+|+..|+.+++++|++.|++++.
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 121 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVY-YRGQTALHIAIERRCKHYVELLVEKGADVHA 121 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSS-EESBCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccc-cCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc
Confidence 477999999999 67999999999998754 33333 4899999999999999999999999999998
Q ss_pred CCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCChHHHHHHHcCCh--------
Q psy10604 131 SNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLK---GGCKVDASTKKGNTALHIAALDSLV-------- 199 (225)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~---~ga~~~~~d~~g~tpL~~A~~~~~~-------- 199 (225)
.+..... ........+..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+.
T Consensus 122 ~~~~~~~----~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~ 197 (260)
T 3jxi_A 122 QARGRFF----QPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFV 197 (260)
T ss_dssp CCEECCC----SSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHH
T ss_pred ccccccc----CcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHH
Confidence 8720000 000000001279999999999999999999999 9999999999999999999987772
Q ss_pred HHHHHHHhhcC
Q psy10604 200 TDIASSAITDA 210 (225)
Q Consensus 200 ~~i~~~l~~~~ 210 (225)
..++++|+..|
T Consensus 198 ~~~v~~Ll~~g 208 (260)
T 3jxi_A 198 TKMYDLLLIKC 208 (260)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 24556665543
No 83
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=1.5e-24 Score=177.87 Aligned_cols=131 Identities=16% Similarity=0.159 Sum_probs=111.9
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC---HHHHHHHHHCC-CCCCCCCcchhhHH
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGH---LDKLRELLEAG-VDINTSNATSKKLD 139 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~---~~iv~~Ll~~g-~~~~~~~~~~~~~~ 139 (225)
.+..|.||||+|+..|+.++|++|+++|++++..+ ..|.||||+|+..|+ .++++.|++.+ ++++.++.
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d-~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~------ 199 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD-NMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS------ 199 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCC-TTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECT------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCC------
Confidence 57889999999999999999999999999999998 899999999999998 67888888875 66776664
Q ss_pred HHhhhhhhccCCCCCcHHHHHHH----cCCHHHHHHHHHCCC--------------------------------------
Q psy10604 140 NQLNIHQKNIKNNGLNALHLAAK----DGHTTVVKALLKGGC-------------------------------------- 177 (225)
Q Consensus 140 ~~~~~~~~~~d~~g~t~L~~A~~----~~~~~~~~~Ll~~ga-------------------------------------- 177 (225)
.|+||||+|+. .|+.+++++|++.++
T Consensus 200 ------------~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~ 267 (327)
T 1sw6_A 200 ------------MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD 267 (327)
T ss_dssp ------------TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS
T ss_pred ------------CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH
Confidence 89999999998 889999999887643
Q ss_pred -------CCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCCc
Q psy10604 178 -------KVDASTKKGNTALHIAALDSLVTDIASSAITDATSLP 214 (225)
Q Consensus 178 -------~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~~ 214 (225)
+++.+|..|+||||+|+..|+. .++++|+..|+.++
T Consensus 268 ~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~-~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 268 LKWIIANMLNAQDSNGDTCLNIAARLGNI-SIVDALLDYGADPF 310 (327)
T ss_dssp HHHHHHHTTTCCCTTSCCHHHHHHHHCCH-HHHHHHHHTTCCTT
T ss_pred HHHHHHhCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCCc
Confidence 5788888999999999999996 56666666666553
No 84
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=5.8e-24 Score=169.65 Aligned_cols=141 Identities=22% Similarity=0.183 Sum_probs=113.1
Q ss_pred cCCCCchHHHHHHHc---CCHHHHHHHHHcCCCC-------CC----CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy10604 64 CYSDPNTSFLRAARA---GHLDKLRELLEAGVDI-------NT----SNASDPNTSFLRAARAGHLDKLRELLEAGVDIN 129 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~-------~~----~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~ 129 (225)
.+..|.||||+|+.. |+.+++++|++.|+++ +. .+ ..|.||||+|+..|+.+++++|++.|++++
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 128 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSY-YKGQTALHIAIERRNMTLVTLLVENGADVQ 128 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTT-TTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhccccccc-CCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 367899999999987 9999999999998653 22 34 689999999999999999999999999999
Q ss_pred CCCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCChHHHHHHHcCCh-------
Q psy10604 130 TSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLK---GGCKVDASTKKGNTALHIAALDSLV------- 199 (225)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~---~ga~~~~~d~~g~tpL~~A~~~~~~------- 199 (225)
.++.... .........+..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+.
T Consensus 129 ~~~~~~~----~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~ 204 (273)
T 2pnn_A 129 AAANGDF----FKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKF 204 (273)
T ss_dssp CCBCSGG----GSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHH
T ss_pred ccccccc----cccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHH
Confidence 8774110 0000001112369999999999999999999999 9999999999999999999998872
Q ss_pred -HHHHHHHhhc
Q psy10604 200 -TDIASSAITD 209 (225)
Q Consensus 200 -~~i~~~l~~~ 209 (225)
..++++|+..
T Consensus 205 ~~~~v~~Ll~~ 215 (273)
T 2pnn_A 205 VTSMYNEILIL 215 (273)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 2455566543
No 85
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=3.8e-23 Score=165.97 Aligned_cols=125 Identities=19% Similarity=0.264 Sum_probs=112.8
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCCCcchhhH
Q psy10604 68 PNTSFLRAARAGHLDKLRELLEAGVDINT------SNASDPNTSFLRAARA---GHLDKLRELLEAGVDINTSNATSKKL 138 (225)
Q Consensus 68 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------~~~~~g~t~Lh~A~~~---~~~~iv~~Ll~~g~~~~~~~~~~~~~ 138 (225)
..++|+.|+..|+.+.++.++..|.+++. .+ ..|.||||+|+.. |+.+++++|++.|++++.++.
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~-~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~----- 203 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGH-EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG----- 203 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCS-STTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCT-----
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccc-cCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCC-----
Confidence 35789999999999999999999999543 35 7899999999999 899999999999999999886
Q ss_pred HHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCC
Q psy10604 139 DNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATS 212 (225)
Q Consensus 139 ~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~ 212 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..++.
T Consensus 204 -------------~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 204 -------------KGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE-HCEELLTQALSG 263 (278)
T ss_dssp -------------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHHTT
T ss_pred -------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCH-HHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999996 556666665544
No 86
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=5.2e-23 Score=160.09 Aligned_cols=150 Identities=22% Similarity=0.250 Sum_probs=107.1
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchh------
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK------ 136 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~------ 136 (225)
..+..|.||||+|+..|+.+++++|++.|.+++......|.||||+|+..|+.+++++|++.|++++.++..+.
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 116 (240)
T 3eu9_A 37 QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLA 116 (240)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 34678999999999999999999999999999877756699999999999999999999999999988765221
Q ss_pred ------hHHHHhhhhhh---ccCCCCCcHHHHHHHcCC-HHHHHHHHHCCCCCCCCCC-CCChHHHHHHHcCChHHHHHH
Q psy10604 137 ------KLDNQLNIHQK---NIKNNGLNALHLAAKDGH-TTVVKALLKGGCKVDASTK-KGNTALHIAALDSLVTDIASS 205 (225)
Q Consensus 137 ------~~~~~~~~~~~---~~d~~g~t~L~~A~~~~~-~~~~~~Ll~~ga~~~~~d~-~g~tpL~~A~~~~~~~~i~~~ 205 (225)
+....+...+. ..+..|.||||+|+..++ .+++++|+..|++++..+. .|.||||+|+..|+. .++++
T Consensus 117 ~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~ 195 (240)
T 3eu9_A 117 AQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNT-TVISL 195 (240)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCH-HHHHH
T ss_pred HHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCH-HHHHH
Confidence 22233333222 234566666666665544 5666666666666666665 666777777666664 34445
Q ss_pred HhhcCCCC
Q psy10604 206 AITDATSL 213 (225)
Q Consensus 206 l~~~~~~~ 213 (225)
|+..|...
T Consensus 196 Ll~~g~~~ 203 (240)
T 3eu9_A 196 LLEAGANV 203 (240)
T ss_dssp HHHHTCCT
T ss_pred HHHcCCCC
Confidence 55544444
No 87
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=1.7e-23 Score=169.75 Aligned_cols=126 Identities=21% Similarity=0.244 Sum_probs=114.4
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCCCcchh
Q psy10604 66 SDPNTSFLRAARAGHLDKLRELLEAGVDINT------SNASDPNTSFLRAARA---GHLDKLRELLEAGVDINTSNATSK 136 (225)
Q Consensus 66 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------~~~~~g~t~Lh~A~~~---~~~~iv~~Ll~~g~~~~~~~~~~~ 136 (225)
....++|+.|+..|+.+.+++|++.|++++. .+ ..|.||||+|+.. ++.+++++|++.|++++.++.
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~--- 224 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQ-APEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA--- 224 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSC-SCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT---
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccC-CCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC---
Confidence 3456789999999999999999999999988 45 8899999999998 899999999999999999886
Q ss_pred hHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q psy10604 137 KLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDAT 211 (225)
Q Consensus 137 ~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~ 211 (225)
.|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. .++++|+..++
T Consensus 225 ---------------~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~-~iv~~Ll~~ga 283 (301)
T 2b0o_E 225 ---------------DGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHK-ECEELLEQAQA 283 (301)
T ss_dssp ---------------TCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCH-HHHHHHHHHHH
T ss_pred ---------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999996 56666665543
No 88
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.90 E-value=2e-23 Score=174.08 Aligned_cols=146 Identities=18% Similarity=0.232 Sum_probs=108.8
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCCCHHHHHHHcC---CHHHHHHHHHCCCCCCCCC-----
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAG---VDINTSNASDPNTSFLRAARAG---HLDKLRELLEAGVDINTSN----- 132 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---~~~~~~~~~~g~t~Lh~A~~~~---~~~iv~~Ll~~g~~~~~~~----- 132 (225)
.+..|.||||+|+..|+.+++++|++.+ ++++..+ ..|.||||+|+..+ +.+++++|++.|++++..+
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d-~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 273 (373)
T 2fo1_E 195 YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELD-RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 273 (373)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCC-TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTS
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcC-CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccC
Confidence 4566777777777777777777777766 6777776 67777777777776 6777777777777766421
Q ss_pred ---c------------chhhHHHHhhhh----hhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q psy10604 133 ---A------------TSKKLDNQLNIH----QKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIA 193 (225)
Q Consensus 133 ---~------------~~~~~~~~~~~~----~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A 193 (225)
. .......++... .+..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 274 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 353 (373)
T ss_dssp SSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred cccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence 1 111233333322 233457999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHhhcCC
Q psy10604 194 ALDSLVTDIASSAITDAT 211 (225)
Q Consensus 194 ~~~~~~~~i~~~l~~~~~ 211 (225)
+..|+. .++++|++.++
T Consensus 354 ~~~g~~-~iv~~Ll~~~a 370 (373)
T 2fo1_E 354 QANNHH-NIVDIFDRCRP 370 (373)
T ss_dssp HHTTCH-HHHHHHHTTC-
T ss_pred HHcCCH-HHHHHHHhcCc
Confidence 999995 67777776654
No 89
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.90 E-value=4.7e-23 Score=169.11 Aligned_cols=130 Identities=26% Similarity=0.362 Sum_probs=91.0
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHCCCCCCCCCcchhhH
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLE-AGVDINTSNASDPNTSFLRAARAGH----LDKLRELLEAGVDINTSNATSKKL 138 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~t~Lh~A~~~~~----~~iv~~Ll~~g~~~~~~~~~~~~~ 138 (225)
.+..|.||||+|+..|+.+++++|++ .|++++..+ ..|.|+||+++..+. ..++++|++.|++++.++.
T Consensus 164 ~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d-~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~----- 237 (337)
T 4g8k_A 164 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD-NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE----- 237 (337)
T ss_dssp CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCC-TTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCG-----
T ss_pred ccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccC-CCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCC-----
Confidence 45678999999999999999999996 599999998 899999999887654 4688999999999999886
Q ss_pred HHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 139 DNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKG-GCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 139 ~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+..|+.++++.|+.. |++++.+|..|+||||+|+..|+. .++++|+..|+..
T Consensus 238 -------------~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~-~iv~~Ll~~GAd~ 299 (337)
T 4g8k_A 238 -------------RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLK-KIAELLCKRGAST 299 (337)
T ss_dssp -------------GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCH-HHHHHHHTTSCSS
T ss_pred -------------CCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCH-HHHHHHHHCCCCC
Confidence 455555555555555555555543 455555555555555555555553 3344444444433
No 90
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=3.8e-23 Score=171.87 Aligned_cols=122 Identities=27% Similarity=0.373 Sum_probs=112.6
Q ss_pred CCchHHHHHHHc-CCHHHHHHHHHcCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhh
Q psy10604 67 DPNTSFLRAARA-GHLDKLRELLEAGVDINTSNA-SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNI 144 (225)
Q Consensus 67 ~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~~-~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~ 144 (225)
.+.|+||+|+.. |+.+++++|++.|++++..+. ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~----------- 266 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADS----------- 266 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-----------
Confidence 346799999999 999999999999999998762 6899999999999999999999999999999886
Q ss_pred hhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHH
Q psy10604 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSA 206 (225)
Q Consensus 145 ~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l 206 (225)
.|+||||+|+..|+.+++++|+.+|++++.+|..|.||||+|+..|+.+.+..++
T Consensus 267 -------~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 267 -------AGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp -------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -------CCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999976554444
No 91
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=5.1e-24 Score=148.41 Aligned_cols=108 Identities=34% Similarity=0.521 Sum_probs=100.8
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
.+.+|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..++.+++++|++.|++++.++.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~---------- 73 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARS-KDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSK---------- 73 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCC-SSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCT----------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCC----------
Confidence 36789999999999999999999999999999998 8999999999999999999999999999998886
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHH
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTAL 190 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL 190 (225)
.|+||||+|+..++.+++++|+++|++++.++..|.+|-
T Consensus 74 --------~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 74 --------DGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp --------TCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred --------CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 899999999999999999999999999999999999884
No 92
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.3e-22 Score=136.08 Aligned_cols=92 Identities=41% Similarity=0.656 Sum_probs=84.1
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy10604 101 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVD 180 (225)
Q Consensus 101 ~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~ 180 (225)
.|+||||+|+..|+.+++++|++.|++++.++. .|+||||+|+..++.+++++|+++|++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~------------------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 62 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK------------------NGRTPLHLAARNGHLEVVKLLLEAGADVN 62 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT------------------TSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC------------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 489999999999999999999999999999886 99999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHcCChHHHHHHHhhcCC
Q psy10604 181 ASTKKGNTALHIAALDSLVTDIASSAITDAT 211 (225)
Q Consensus 181 ~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~ 211 (225)
.+|..|.||||+|+..|+. .++++|+..|+
T Consensus 63 ~~d~~g~t~l~~A~~~~~~-~~~~~Ll~~ga 92 (93)
T 1n0q_A 63 AKDKNGRTPLHLAARNGHL-EVVKLLLEAGA 92 (93)
T ss_dssp CCCTTSCCHHHHHHHTTCH-HHHHHHHHTTC
T ss_pred ccCCCCCCHHHHHHHcCCH-HHHHHHHHcCC
Confidence 9999999999999999996 56667776654
No 93
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.2e-24 Score=169.95 Aligned_cols=130 Identities=16% Similarity=0.120 Sum_probs=110.8
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHh
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQL 142 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~ 142 (225)
..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 49 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~--------- 118 (229)
T 2vge_A 49 QPNEEGITALHNAICGANYSIVDFLITAGANVNSPD-SHGWTPLHCAASCNDTVICMALVQHGAAIFATTL--------- 118 (229)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCS---------
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccC---------
Confidence 357889999999999999999999999999999998 8999999999999999999999999999998763
Q ss_pred hhhhhccCCCCCcHHHHH--HHcCCHHHHHHHHHCCCCCCC--------------------------------CCCCCCh
Q psy10604 143 NIHQKNIKNNGLNALHLA--AKDGHTTVVKALLKGGCKVDA--------------------------------STKKGNT 188 (225)
Q Consensus 143 ~~~~~~~d~~g~t~L~~A--~~~~~~~~~~~Ll~~ga~~~~--------------------------------~d~~g~t 188 (225)
..|+||||+| +..|+.+++++|+++|++++. +|..|+|
T Consensus 119 --------~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~T 190 (229)
T 2vge_A 119 --------SDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEET 190 (229)
T ss_dssp --------STTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCS
T ss_pred --------CCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCccc
Confidence 3899999999 999999999999997766543 4566777
Q ss_pred HHHHHHHcCChHHHHHHHhhcC
Q psy10604 189 ALHIAALDSLVTDIASSAITDA 210 (225)
Q Consensus 189 pL~~A~~~~~~~~i~~~l~~~~ 210 (225)
|||+|+..|+.+.|...++...
T Consensus 191 pL~~A~~~g~~~~v~~~~l~~~ 212 (229)
T 2vge_A 191 DWWWAALHGQEGYVPRNYFGLF 212 (229)
T ss_dssp SEEEEEETTEEEEEEGGGEESS
T ss_pred HHHHHHHcCCcceeehhhhhhC
Confidence 7777777777655555444433
No 94
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=6.1e-23 Score=150.64 Aligned_cols=111 Identities=24% Similarity=0.200 Sum_probs=89.2
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNT-SFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ 141 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t-~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 141 (225)
..+..|.||||+|+ .|+.+++++|++.|++++..+ ..|.| |||+|+..|+.+++++|++.|++++.++.
T Consensus 40 ~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d-~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~-------- 109 (156)
T 1bi7_B 40 APNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCAD-PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDA-------- 109 (156)
T ss_dssp CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCC-TTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT--------
T ss_pred CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcC-CCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCC--------
Confidence 35678999999986 999999999999999999998 88998 99999999999999999999999999886
Q ss_pred hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q psy10604 142 LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIA 193 (225)
Q Consensus 142 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A 193 (225)
.|+||||+|+..|+.+++++|+++|++++.++..|.||.+-+
T Consensus 110 ----------~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 110 ----------WGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp ----------TCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred ----------CCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 899999999999999999999999999999999999998743
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=7.6e-23 Score=165.97 Aligned_cols=111 Identities=21% Similarity=0.197 Sum_probs=97.9
Q ss_pred cCCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHH
Q psy10604 64 CYSDPNTSFLRAARA---GHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDN 140 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 140 (225)
.+..|.||||+|+.. |+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d-~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~------- 257 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA-ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNE------- 257 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCT-------
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-------
Confidence 467899999999997 89999999999999999998 8999999999999999999999999999999886
Q ss_pred HhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCCh
Q psy10604 141 QLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLV 199 (225)
Q Consensus 141 ~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~ 199 (225)
.|.||||+|+..++.+++++|+++|++ .|.||||+|+..|+.
T Consensus 258 -----------~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 258 -----------AGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp -----------TSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred -----------CCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 999999999999999999999999887 588999999998873
No 96
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.87 E-value=2.1e-22 Score=161.30 Aligned_cols=144 Identities=24% Similarity=0.286 Sum_probs=118.3
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCCCcchhh-------
Q psy10604 68 PNTSFLRAARAGHLDKLRELLEAGVD--INTSNASDPNTSFLRAARAGHLDKLRELLEAGV-DINTSNATSKK------- 137 (225)
Q Consensus 68 g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~-~~~~~~~~~~~------- 137 (225)
+.+++|.|+..|+.+.++.++..+.+ ++..+ ..|.||||+|+..|+.+++++|++.|+ +++..+..+..
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d-~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIAD-SNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTAL 154 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGG
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCC-CCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHH
Confidence 35678999999999999999987766 78888 899999999999999999999999998 88877764332
Q ss_pred ----------HHHHhhhhhhc---cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHH
Q psy10604 138 ----------LDNQLNIHQKN---IKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIAS 204 (225)
Q Consensus 138 ----------~~~~~~~~~~~---~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~ 204 (225)
....+...+.. .+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+. .+++
T Consensus 155 ~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~-~iv~ 233 (276)
T 4hbd_A 155 ATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHK-EIAG 233 (276)
T ss_dssp CCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-HHHH
T ss_pred HHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCH-HHHH
Confidence 22223333322 356799999999999999999999999999999999999999999999996 5566
Q ss_pred HHhh-cCCCC
Q psy10604 205 SAIT-DATSL 213 (225)
Q Consensus 205 ~l~~-~~~~~ 213 (225)
+|+. .++.+
T Consensus 234 ~Ll~~~gad~ 243 (276)
T 4hbd_A 234 LLLAVPSCDI 243 (276)
T ss_dssp HHHTSTTCCT
T ss_pred HHHhcCCCCC
Confidence 6665 55544
No 97
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=6.9e-23 Score=167.94 Aligned_cols=134 Identities=18% Similarity=0.132 Sum_probs=104.5
Q ss_pred ccCCCCchHHHHHHHcCC---HHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHH----cCCHHHHHHHHHC----------
Q psy10604 63 DCYSDPNTSFLRAARAGH---LDKLRELLEAG-VDINTSNASDPNTSFLRAAR----AGHLDKLRELLEA---------- 124 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~---~~~v~~Ll~~g-~~~~~~~~~~g~t~Lh~A~~----~~~~~iv~~Ll~~---------- 124 (225)
..+..|.||||+|+..|+ .++++.|++.+ ++++..+ ..|.||||+|+. .|+.+++++|++.
T Consensus 159 ~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d-~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~ 237 (327)
T 1sw6_A 159 YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED-SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQN 237 (327)
T ss_dssp BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC-TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGG
T ss_pred CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC-CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccc
Confidence 357889999999999998 68888888876 6788888 899999999999 8999999999987
Q ss_pred ----------CCCCCCCCcchhhHHHH-------hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q psy10604 125 ----------GVDINTSNATSKKLDNQ-------LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGN 187 (225)
Q Consensus 125 ----------g~~~~~~~~~~~~~~~~-------~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~ 187 (225)
|++++.++..+...+.. +....+..|..|+||||+|+..|+.+++++|+++|++++.+|..|+
T Consensus 238 ~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~ 317 (327)
T 1sw6_A 238 RPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL 317 (327)
T ss_dssp CCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred hHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 77777776644332211 1224666788999999999999999999999999999999999999
Q ss_pred hHHHHHHHcC
Q psy10604 188 TALHIAALDS 197 (225)
Q Consensus 188 tpL~~A~~~~ 197 (225)
||||+|+..|
T Consensus 318 TpL~~A~~~g 327 (327)
T 1sw6_A 318 RPVDFGAGLE 327 (327)
T ss_dssp CGGGGTCC--
T ss_pred CHHHHHHhcC
Confidence 9999998764
No 98
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.87 E-value=8e-23 Score=154.66 Aligned_cols=126 Identities=17% Similarity=0.170 Sum_probs=107.5
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCH----HHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 68 PNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHL----DKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 68 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~----~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
+.++|+.|+..|+.+.++.++..+.+ ..+...|+||||+|+..++. +++++|++.|++++.++.
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~---------- 73 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTK---------- 73 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCT----------
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCC----------
Confidence 45789999999999999999998754 33325699999999999975 599999999999999986
Q ss_pred hhhhccCCCCCcHHHHHHHcCC------HHHHHHHHHCCCCCCCCCCCCC-hHHHHHHHcCChH----HHHHHHhh-cCC
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGH------TTVVKALLKGGCKVDASTKKGN-TALHIAALDSLVT----DIASSAIT-DAT 211 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~------~~~~~~Ll~~ga~~~~~d~~g~-tpL~~A~~~~~~~----~i~~~l~~-~~~ 211 (225)
.|+||||+|+..++ .+++++|+++|++++.+|..|+ ||||+|+..+..+ .++++|+. .|+
T Consensus 74 --------~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga 145 (186)
T 3t8k_A 74 --------EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL 145 (186)
T ss_dssp --------TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC
T ss_pred --------CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC
Confidence 99999999999886 6889999999999999999999 9999999966532 36777777 665
Q ss_pred CC
Q psy10604 212 SL 213 (225)
Q Consensus 212 ~~ 213 (225)
.+
T Consensus 146 d~ 147 (186)
T 3t8k_A 146 QL 147 (186)
T ss_dssp CT
T ss_pred CC
Confidence 55
No 99
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=4.5e-21 Score=137.47 Aligned_cols=102 Identities=29% Similarity=0.382 Sum_probs=90.2
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHH
Q psy10604 91 GVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVK 170 (225)
Q Consensus 91 g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~ 170 (225)
|+|+ .++ ..|.||||+|+..|+.+++++|++.|++++.++. .|+||||+|+..++.++++
T Consensus 1 G~d~-~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~------------------~g~t~L~~A~~~~~~~~~~ 60 (137)
T 3c5r_A 1 GIDP-FTN-HRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDH------------------AGWTPLHEACNHGHLKVVE 60 (137)
T ss_dssp ---C-CCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT------------------TSCCHHHHHHHTTCHHHHH
T ss_pred CCCC-CcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC------------------CCCCHHHHHHHcCCHHHHH
Confidence 5666 555 8899999999999999999999999999998885 8999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 171 ALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 171 ~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
+|+++|++++.+|..|.||||+|+..|+. .++++|+..++..
T Consensus 61 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 61 LLLQHKALVNTTGYQNDSPLHDAAKNGHV-DIVKLLLSYGASR 102 (137)
T ss_dssp HHHHTTCCTTCCCGGGCCHHHHHHHTTCH-HHHHHHHHTTCCT
T ss_pred HHHHcCCcccCcCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCC
Confidence 99999999999999999999999999996 5666666666554
No 100
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.85 E-value=1.7e-20 Score=134.34 Aligned_cols=95 Identities=27% Similarity=0.346 Sum_probs=89.6
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHh
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQL 142 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~ 142 (225)
..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 42 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~--------- 111 (136)
T 2jab_A 42 AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD-AIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDK--------- 111 (136)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT---------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCC---------
Confidence 356789999999999999999999999999999998 8999999999999999999999999999998885
Q ss_pred hhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy10604 143 NIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGG 176 (225)
Q Consensus 143 ~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g 176 (225)
.|+||||+|+..++.+++++|+++|
T Consensus 112 ---------~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 112 ---------FGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp ---------TSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred ---------CCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 8999999999999999999999876
No 101
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.85 E-value=1.9e-21 Score=139.37 Aligned_cols=96 Identities=23% Similarity=0.247 Sum_probs=91.1
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH
Q psy10604 63 DCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASD-PNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ 141 (225)
Q Consensus 63 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 141 (225)
..+..|.||||+|+. |+.+++++|++.|++++..+ .. |.||||+|+..|+.+++++|++.|++++.++.
T Consensus 40 ~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-------- 109 (136)
T 1d9s_A 40 ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCAD-PATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDA-------- 109 (136)
T ss_dssp CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCB-TTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSS--------
T ss_pred CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC--------
Confidence 346789999999999 99999999999999999998 77 99999999999999999999999999999886
Q ss_pred hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy10604 142 LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCK 178 (225)
Q Consensus 142 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~ 178 (225)
.|+||||+|+..++.+++++|+++|+|
T Consensus 110 ----------~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 110 ----------WGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp ----------SSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999986
No 102
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=3.2e-20 Score=130.34 Aligned_cols=96 Identities=45% Similarity=0.668 Sum_probs=91.7
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
.+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..++.+++++|++.|++++.++.
T Consensus 31 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~---------- 99 (126)
T 1n0r_A 31 KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK---------- 99 (126)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------
T ss_pred cCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccC-CCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCC----------
Confidence 46789999999999999999999999999999998 8999999999999999999999999999998885
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCK 178 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~ 178 (225)
.|.||||+|+..++.+++++|+++|++
T Consensus 100 --------~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 100 --------NGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp --------TSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred --------CCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 899999999999999999999999986
No 103
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=2.3e-22 Score=167.64 Aligned_cols=129 Identities=19% Similarity=0.118 Sum_probs=101.7
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHH
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDIN---TSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDN 140 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 140 (225)
.+.++.||||+|+..|+.++|++|++.|+... ..+ ..|.||||+|+..|+.+++++|++.|+++...+..
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~-~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~------ 160 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQ-AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQ------ 160 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--C-HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHS------
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhc-cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccC------
Confidence 35667899999999999999999999988332 223 46789999999999999999999999864221110
Q ss_pred HhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCChHHHHHH-HcCChHHHHHHHhhcC
Q psy10604 141 QLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDA--STKKGNTALHIAA-LDSLVTDIASSAITDA 210 (225)
Q Consensus 141 ~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~--~d~~g~tpL~~A~-~~~~~~~i~~~l~~~~ 210 (225)
..++||||+|+..|+.+++++|+++|++++. .|..|.||||+|+ ..|+. .++++|+..+
T Consensus 161 ----------~~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~-eiv~~Ll~~g 222 (376)
T 2aja_A 161 ----------AENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH-NVINFLLDCP 222 (376)
T ss_dssp ----------HHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCH-HHHHHHTTSH
T ss_pred ----------CCCCCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCH-HHHHHHHhCC
Confidence 0127999999999999999999999999887 8888999999999 99996 5666666543
No 104
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=5e-20 Score=127.34 Aligned_cols=90 Identities=33% Similarity=0.534 Sum_probs=85.0
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhh
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLN 143 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~ 143 (225)
.+.+|.|+||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d-~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~---------- 88 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKD-KNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK---------- 88 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc----------
Confidence 47889999999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred hhhhccCCCCCcHHHHHHHcCCHHHHHHH
Q psy10604 144 IHQKNIKNNGLNALHLAAKDGHTTVVKAL 172 (225)
Q Consensus 144 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~L 172 (225)
.|+||||+|+..|+.+++++|
T Consensus 89 --------~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 89 --------FGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp --------TSCCHHHHHHHHTCHHHHHHH
T ss_pred --------CCCcHHHHHHHcCCHHHHHHh
Confidence 899999999999999999987
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=2.4e-20 Score=161.01 Aligned_cols=107 Identities=21% Similarity=0.184 Sum_probs=90.8
Q ss_pred CCCCchHHHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH
Q psy10604 65 YSDPNTSFLRAAR---AGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ 141 (225)
Q Consensus 65 ~~~g~t~L~~A~~---~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 141 (225)
+..|.||||+|+. .|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~-------- 238 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA-ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNE-------- 238 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCC-SSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCT--------
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC--------
Confidence 6789999999977 899999999999999999999 8999999999999999999999999999999986
Q ss_pred hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHH
Q psy10604 142 LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTAL 190 (225)
Q Consensus 142 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL 190 (225)
.|+||||+|+..|+.+++++|+++|++++..+.++.+++
T Consensus 239 ----------~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~~~ 277 (497)
T 3lvq_E 239 ----------AGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDYSW 277 (497)
T ss_dssp ----------TCCCHHHHHHHTTCHHHHHHHHHTCC-------------
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeeccc
Confidence 999999999999999999999999999987544444333
No 106
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=6.5e-20 Score=129.01 Aligned_cols=95 Identities=25% Similarity=0.386 Sum_probs=85.7
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy10604 100 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKV 179 (225)
Q Consensus 100 ~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~ 179 (225)
..|.||||+|+..|+.+++++|++.|++++.++. .|+||||+|+..++.+++++|+++|+++
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 66 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLE------------------GGRKPLHYAADCGQLEILEFLLLKGADI 66 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCT------------------TSSCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCC------------------CCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 5688999999999999999999999999998885 8999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 180 DASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 180 ~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
+.+|..|+||||+|+..|+. .++++|+..+...
T Consensus 67 ~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~ga~~ 99 (123)
T 3aaa_C 67 NAPDKHHITPLLSAVYEGHV-SCVKLLLSKGADK 99 (123)
T ss_dssp TCCCTTSCCHHHHHHHHTCH-HHHHHHHHTTCCT
T ss_pred CcCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCC
Confidence 99999999999999999996 5666666666554
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=6.5e-20 Score=147.09 Aligned_cols=96 Identities=17% Similarity=0.191 Sum_probs=91.8
Q ss_pred CCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHH
Q psy10604 65 YSDPNTSFLRAARA---GHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQ 141 (225)
Q Consensus 65 ~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 141 (225)
+..|.||||+|+.. |+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 166 ~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~-------- 236 (278)
T 1dcq_A 166 HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQT-GKGSTALHYCCLTDNAECLKLLLRGKASIEIANE-------- 236 (278)
T ss_dssp SSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--------
T ss_pred ccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccC--------
Confidence 67799999999999 89999999999999999998 8999999999999999999999999999999986
Q ss_pred hhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy10604 142 LNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKV 179 (225)
Q Consensus 142 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~ 179 (225)
.|.||||+|+..|+.+++++|+++|++.
T Consensus 237 ----------~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 237 ----------SGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp ----------TSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999998864
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=2.1e-20 Score=129.94 Aligned_cols=99 Identities=35% Similarity=0.566 Sum_probs=90.9
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCC
Q psy10604 97 SNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGG 176 (225)
Q Consensus 97 ~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g 176 (225)
++ ..|.||||+|+..|+.+++++|++.|++++.++. .|+||||+|+..++.+++++|+++|
T Consensus 5 ~d-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~------------------~g~t~L~~A~~~~~~~~~~~Ll~~g 65 (115)
T 2l6b_A 5 GS-KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSK------------------DGNTPLHLAAKNGHAEIVKLLLAKG 65 (115)
T ss_dssp CS-CSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCS------------------SSCCTTHHHHTTTCHHHHHHHTTTT
T ss_pred cC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC------------------CCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 44 7899999999999999999999999999998885 8999999999999999999999999
Q ss_pred CCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCCch
Q psy10604 177 CKVDASTKKGNTALHIAALDSLVTDIASSAITDATSLPC 215 (225)
Q Consensus 177 a~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~~~ 215 (225)
++++.+|..|.||||+|+..|+. .++++|+..|+.++.
T Consensus 66 ~~~~~~d~~g~tpl~~A~~~~~~-~~~~~Ll~~ga~~n~ 103 (115)
T 2l6b_A 66 ADVNARSKDGNTPEHLAKKNGHH-EIVKLLDAKGADVNA 103 (115)
T ss_dssp CCTTCCCTTCCCTTHHHHTTTCH-HHHHHHHTTSSSHHH
T ss_pred CCCcccCCCCCCHHHHHHHCCCH-HHHHHHHHcCCCCCc
Confidence 99999999999999999999995 677788887776644
No 109
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.82 E-value=1.1e-19 Score=136.63 Aligned_cols=112 Identities=23% Similarity=0.230 Sum_probs=98.3
Q ss_pred CcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHH
Q psy10604 61 CYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDN 140 (225)
Q Consensus 61 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 140 (225)
....+..|.||||+|+..|+.+++++|++.|++++..++..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 69 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~------- 141 (183)
T 3deo_A 69 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE------- 141 (183)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-------
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCC-------
Confidence 3445788999999999999999999999999999988767899999999999999999999999999999886
Q ss_pred HhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhh
Q psy10604 141 QLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAIT 208 (225)
Q Consensus 141 ~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~ 208 (225)
.|+||||+|+..++. ..+.+||++|+..|+ ..++++|..
T Consensus 142 -----------~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~-~~i~~~L~~ 180 (183)
T 3deo_A 142 -----------RGLTALELAREILKT-----------------TPKGNPMQFGRRIGL-EKVINVLEG 180 (183)
T ss_dssp -----------TSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHH-HHHHHHHHT
T ss_pred -----------CCCCHHHHHHHhccC-----------------cccccHHHHHHHcCH-HHHHHHHHH
Confidence 999999999875422 456799999999998 466666654
No 110
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=2.1e-19 Score=124.13 Aligned_cols=88 Identities=41% Similarity=0.576 Sum_probs=82.1
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy10604 100 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKV 179 (225)
Q Consensus 100 ~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~ 179 (225)
..|.||||+|+..|+.+++++|++.|++++.++. .|+||||+|+..|+.+++++|+++|+++
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~------------------~g~tpLh~A~~~~~~~~v~~Ll~~ga~~ 83 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKDK------------------NGSTPLHLAARNGHLEVVKLLLEAGADV 83 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT------------------TCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccCC------------------CCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 6899999999999999999999999999998885 9999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHcCChHHHHHHH
Q psy10604 180 DASTKKGNTALHIAALDSLVTDIASSA 206 (225)
Q Consensus 180 ~~~d~~g~tpL~~A~~~~~~~~i~~~l 206 (225)
+.+|..|.||||+|+..|+.+ ++++|
T Consensus 84 ~~~d~~g~tpl~~A~~~~~~~-~~~~L 109 (110)
T 2zgd_A 84 XAQDKFGKTAFDISIDNGNED-LAEIL 109 (110)
T ss_dssp TCCCTTSCCHHHHHHHHTCHH-HHHHH
T ss_pred cccccCCCcHHHHHHHcCCHH-HHHHh
Confidence 999999999999999999964 44443
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.80 E-value=5.3e-22 Score=165.51 Aligned_cols=122 Identities=25% Similarity=0.182 Sum_probs=103.7
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCcchhhH
Q psy10604 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDI---NTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINT--SNATSKKL 138 (225)
Q Consensus 64 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~--~~~~~~~~ 138 (225)
.+..|.||||+|+..|+.++|++|+++|+++ +... .. .||||+|+..|+.+++++|++.|++++. .+.
T Consensus 124 ~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~-~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~----- 196 (376)
T 2aja_A 124 IQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA-EN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQA----- 196 (376)
T ss_dssp -CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSH-HH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHH-----
T ss_pred hccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCC-CC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCC-----
Confidence 3456789999999999999999999999762 3332 22 8999999999999999999999998765 554
Q ss_pred HHHhhhhhhccCCCCCcHHHHHH-HcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhhcCCCC
Q psy10604 139 DNQLNIHQKNIKNNGLNALHLAA-KDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAITDATSL 213 (225)
Q Consensus 139 ~~~~~~~~~~~d~~g~t~L~~A~-~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~~~~~~ 213 (225)
.|+||||+|+ ..|+.+++++|+++|++ |.|||++|+..|+.+ ++++|+.+++.+
T Consensus 197 -------------~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~e-vv~lL~~~ga~~ 251 (376)
T 2aja_A 197 -------------ENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKY-VNPFIARHVNRL 251 (376)
T ss_dssp -------------HHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTT-HHHHHHHHHHHH
T ss_pred -------------CCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHH-HHHHHHhcCccc
Confidence 7899999999 99999999999998753 899999999999976 888887766544
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=8.2e-19 Score=145.78 Aligned_cols=114 Identities=23% Similarity=0.287 Sum_probs=88.7
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHHHhhhh
Q psy10604 66 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIH 145 (225)
Q Consensus 66 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~ 145 (225)
..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d-~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~------------ 299 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANVNQAD-SAGRGPLHHATILGHTGLACLFLKRGADLGARDS------------ 299 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT------------
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCC------------
Confidence 789999999999999999999999999999998 8999999999999999999999999999999886
Q ss_pred hhccCCCCCcHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCChHHHHHHHcCC
Q psy10604 146 QKNIKNNGLNALHLAAKDGHTTVVKALLKGG---CKVDASTKKGNTALHIAALDSL 198 (225)
Q Consensus 146 ~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g---a~~~~~d~~g~tpL~~A~~~~~ 198 (225)
.|.||||+|+..++.+++++|+..| ++....+..+.|+++++.....
T Consensus 300 ------~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 300 ------EGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp ------TSCCHHHHHHHTTCHHHHHHHHHHHC------------------------
T ss_pred ------CCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHHh
Confidence 9999999999999999999999876 3345567778899988776544
No 113
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.79 E-value=1.5e-19 Score=139.81 Aligned_cols=107 Identities=20% Similarity=0.216 Sum_probs=85.5
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHH
Q psy10604 62 YDCYSDPNTSFLRAARAGHLDKLRELLEA-GVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDN 140 (225)
Q Consensus 62 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 140 (225)
...+..|.||||+|+..|+.+++++|++. |++++..+ ..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 100 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~------- 171 (222)
T 3ehr_A 100 NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQN-KLGDTALHAAAWKGYADIVQLLLAKGARTDLRNI------- 171 (222)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCC-TTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCT-------
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-------
Confidence 33568899999999999999999999998 99999998 8999999999999999999999999999999886
Q ss_pred HhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q psy10604 141 QLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGN 187 (225)
Q Consensus 141 ~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~ 187 (225)
.|.||||+|+..+..++++.|+..|+.....+..+.
T Consensus 172 -----------~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 172 -----------EKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp -----------TSCCHHHHCCSHHHHHHHC-----------------
T ss_pred -----------CCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 999999999999999999999999999887776553
No 114
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.75 E-value=5.4e-18 Score=133.24 Aligned_cols=112 Identities=23% Similarity=0.224 Sum_probs=98.3
Q ss_pred CcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCcchhhHHH
Q psy10604 61 CYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDN 140 (225)
Q Consensus 61 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 140 (225)
....+..|.||||+|+..|+.+++++|++.|++++..++..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 70 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~------- 142 (244)
T 3ui2_A 70 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE------- 142 (244)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-------
T ss_pred CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-------
Confidence 3445788999999999999999999999999999998867899999999999999999999999999999886
Q ss_pred HhhhhhhccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCChHHHHHHHhh
Q psy10604 141 QLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAALDSLVTDIASSAIT 208 (225)
Q Consensus 141 ~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~i~~~l~~ 208 (225)
.|+||||+|+..+. ...+.|||++|+..|+. .++++|..
T Consensus 143 -----------~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~-~iv~~L~~ 181 (244)
T 3ui2_A 143 -----------RGLTALELAREILK-----------------TTPKGNPMQFGRRIGLE-KVINVLEG 181 (244)
T ss_dssp -----------TCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHH-HHHHHHHH
T ss_pred -----------CCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChH-HHHHHHHH
Confidence 99999999986322 25688999999999995 46666655
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=53.97 E-value=43 Score=27.76 Aligned_cols=50 Identities=24% Similarity=0.153 Sum_probs=38.4
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCC-------------CCCCCCHHHHHHHcCCHHHHHHHHHC
Q psy10604 75 AARAGHLDKLRELLEAGVDINTSN-------------ASDPNTSFLRAARAGHLDKLRELLEA 124 (225)
Q Consensus 75 A~~~g~~~~v~~Ll~~g~~~~~~~-------------~~~g~t~Lh~A~~~~~~~iv~~Ll~~ 124 (225)
.+..|+...|+..+..|.+++-.- ...|.|.+|+|++..+.+++..|+..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 345677888887777776654432 14799999999999999999999874
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=44.53 E-value=16 Score=19.10 Aligned_cols=18 Identities=28% Similarity=0.383 Sum_probs=15.3
Q ss_pred HHHHHHcCCHHHHHHHHH
Q psy10604 72 FLRAARAGHLDKLRELLE 89 (225)
Q Consensus 72 L~~A~~~g~~~~v~~Ll~ 89 (225)
+..||..|+.+.++.|-.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 788999999999998754
Done!