RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10604
(225 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 73.9 bits (180), Expect = 4e-16
Identities = 31/91 (34%), Positives = 39/91 (42%), Gaps = 18/91 (19%)
Query: 104 TSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKD 163
T A+ GHL ++ LL+ G N SN LH+AA+
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSN------------------VKVETPLHMAARA 43
Query: 164 GHTTVVKALLKGGCKVDASTKKGNTALHIAA 194
GHT V K LL+ KV+A K T LH AA
Sbjct: 44 GHTEVAKYLLQNKAKVNAKAKDDQTPLHCAA 74
Score = 69.2 bits (168), Expect = 2e-14
Identities = 38/141 (26%), Positives = 54/141 (38%), Gaps = 16/141 (11%)
Query: 69 NTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDI 128
T AARAGH + + LL+ +N D T AAR GH + ++ LLE +
Sbjct: 34 ETPLHMAARAGHTEVAKYLLQNKAKVNAKA-KDDQTPLHCAARIGHTNMVKLLLENNANP 92
Query: 129 NTSNATSKKLDNQLNIHQKNIK---------------NNGLNALHLAAKDGHTTVVKALL 173
N + + G LH+AAK G V + LL
Sbjct: 93 NLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLL 152
Query: 174 KGGCKVDASTKKGNTALHIAA 194
+ +A+ K G T LH+A
Sbjct: 153 ERDAHPNAAGKNGLTPLHVAV 173
Score = 68.8 bits (167), Expect = 2e-14
Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 19/124 (15%)
Query: 70 TSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDIN 129
T A+ GHL ++ LL+ G N SN T AARAGH + + LL+ +N
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSN-VKVETPLHMAARAGHTEVAKYLLQNKAKVN 60
Query: 130 TSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTA 189
+ LH AA+ GHT +VK LL+ + +T G+T
Sbjct: 61 AKA------------------KDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTP 102
Query: 190 LHIA 193
LHIA
Sbjct: 103 LHIA 106
Score = 66.2 bits (160), Expect = 2e-13
Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 16/150 (10%)
Query: 60 PCYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLR 119
T AA+ GH + + LL + N N T A+ GH+
Sbjct: 223 SANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN-KSGLTPLHLVAQEGHVPVAD 281
Query: 120 ELLEAGVDINTSNATSK---------------KLDNQLNIHQKNIKNNGLNALHLAAKDG 164
L++ GV ++ + K Q G + LH AA+ G
Sbjct: 282 VLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG 341
Query: 165 HTTVVKALLKGGCKVDASTKKGNTALHIAA 194
HT +V LLK G + + G T L IA
Sbjct: 342 HTDIVTLLLKNGASPNEVSSDGTTPLAIAK 371
Score = 58.8 bits (141), Expect = 7e-11
Identities = 31/134 (23%), Positives = 47/134 (35%), Gaps = 16/134 (11%)
Query: 75 AARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNAT 134
AA+ G + LLE N + + T A +LD ++ LL G ++
Sbjct: 139 AAKYGKVRVAELLLERDAHPNAAG-KNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWN 197
Query: 135 SK---------------KLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKV 179
+ Q G+ LHLAA++GH +V LL
Sbjct: 198 GYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG 257
Query: 180 DASTKKGNTALHIA 193
+ K G T LH+
Sbjct: 258 NLGNKSGLTPLHLV 271
Score = 53.8 bits (128), Expect = 3e-09
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 154 LNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAA 194
L LH+A+ GH +VK LL+ G + S K T LH+AA
Sbjct: 1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAA 41
Score = 45.7 bits (107), Expect = 2e-06
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 19/109 (17%)
Query: 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLE 123
T A+ G++ ++ LL+ D+N + +AA+ GH D + LL+
Sbjct: 293 TTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKT-KLGYSPLHQAAQQGHTDIVTLLLK 351
Query: 124 AGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKAL 172
G N + ++G L +A + G+ +V L
Sbjct: 352 NGASPNEVS------------------SDGTTPLAIAKRLGYISVTDVL 382
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 65.8 bits (159), Expect = 2e-13
Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 23/155 (14%)
Query: 45 LRQEAKIHNAVISLEPCYDCYSDPNTSFLRAARAGHLDKLRELL-EAGVDINTSNAS--- 100
++ A ++ + E T+ + AA GH++ L+ LL E G D+N +
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184
Query: 101 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLA 160
+ L + + LL+ G D+N G L LA
Sbjct: 185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRG------------------ERGKTPLILA 226
Query: 161 AKDGHTTVVKALL-KGGCKVDASTKKGNTALHIAA 194
+ H +V+ LL + +++ + G TAL +A
Sbjct: 227 VEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV 261
Score = 51.1 bits (121), Expect = 2e-08
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 17/96 (17%)
Query: 99 ASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALH 158
A + N ++A + +D +++LLE G ++N + G LH
Sbjct: 2 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-----------------EEGGWTPLH 44
Query: 159 LAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAA 194
A + +V+ LL+ G K G T +AA
Sbjct: 45 NAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAA 80
Score = 50.0 bits (118), Expect = 5e-08
Identities = 32/153 (20%), Positives = 47/153 (30%), Gaps = 25/153 (16%)
Query: 67 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGV 126
+ N ++A + +D +++LLE G ++N T A + D + LL G
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 127 D---------------INTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKA 171
D + KL G A AA G +K
Sbjct: 64 DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123
Query: 172 LLK----------GGCKVDASTKKGNTALHIAA 194
L K + K G TAL AA
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAA 156
Score = 43.0 bits (100), Expect = 1e-05
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 69 NTSFLRAARAGHLDKLRELLE-AGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVD 127
T + A HL ++ LLE ++IN ++ SD T+ L A L + G
Sbjct: 220 KTPLILAVEKKHLGLVQRLLEQEHIEINDTD-SDGKTALLLAVELKLKKIAELLCKRGAS 278
Query: 128 INTSN 132
+ +
Sbjct: 279 TDCGD 283
Score = 38.4 bits (88), Expect = 4e-04
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 60 PCYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLR 119
+ T FL AA AG + L+ L G D+N + T+F+ AA G + L+
Sbjct: 64 DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYG-FTAFMEAAVYGKVKALK 122
Query: 120 ELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALL-KGGCK 178
L + G ++N + Q+ ++ G AL AA+ GH V+K LL + G
Sbjct: 123 FLYKRGANVNLRR--------KTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD 174
Query: 179 VDASTKKGN 187
V+A G
Sbjct: 175 VNACDNMGR 183
Score = 29.2 bits (64), Expect = 0.38
Identities = 7/33 (21%), Positives = 11/33 (33%)
Query: 66 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSN 98
SD T+ L A L + G + +
Sbjct: 251 SDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 60.8 bits (146), Expect = 5e-12
Identities = 38/144 (26%), Positives = 55/144 (38%), Gaps = 17/144 (11%)
Query: 64 CYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLE 123
C S N A +G L++L+E + A + T D T+ A AGH + + LL+
Sbjct: 1 CVS--NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQ 58
Query: 124 AGVDINTSNATSKKLDNQLNIHQK--------------NIKN-NGLNALHLAAKDGHTTV 168
GV +N + + + N N NG LH AA +
Sbjct: 59 LGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEI 118
Query: 169 VKALLKGGCKVDASTKKGNTALHI 192
LL+GG DA TA+H
Sbjct: 119 AVMLLEGGANPDAKDHYEATAMHR 142
Score = 55.7 bits (133), Expect = 3e-10
Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 16/123 (13%)
Query: 87 LLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSK---------- 136
LL G +N N + T AA + LLE G + + +
Sbjct: 89 LLGKGAQVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKG 147
Query: 137 --KLDNQLNIHQKNIK---NNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALH 191
K+ + L ++ + G LHLA + K L+ G + K+ T L
Sbjct: 148 NLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQ 207
Query: 192 IAA 194
+A
Sbjct: 208 VAK 210
Score = 45.7 bits (107), Expect = 1e-06
Identities = 19/139 (13%), Positives = 36/139 (25%), Gaps = 51/139 (36%)
Query: 69 NTSFLRAARAGHLDKLRELLEAGVDINTSNA----------------------------- 99
T AA + LLE G + + +
Sbjct: 104 CTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTN 163
Query: 100 ---SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNA 156
++ NT A +++ + L+ G I N
Sbjct: 164 IQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIEN------------------KEEKTP 205
Query: 157 LHLAAKDGHTTVVKALLKG 175
L +A G ++K +++G
Sbjct: 206 LQVAKG-GLGLILKRMVEG 223
Score = 34.2 bits (77), Expect = 0.008
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 66 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLE 123
++ NT A +++ + L+ G I N + L+ A+ G L+ ++E
Sbjct: 167 TEGNTPLHLACDEERVEEAKLLVSQGASIYIENKE--EKTPLQVAKGGLGLILKRMVE 222
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 58.2 bits (139), Expect = 8e-11
Identities = 29/138 (21%), Positives = 52/138 (37%), Gaps = 18/138 (13%)
Query: 59 EPCYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKL 118
+ + + + L R+ L +G + +A T+ AA G+ + L
Sbjct: 156 QNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVL 215
Query: 119 RELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCK 178
+ L++A D+N + +G LH AA G + L++ C
Sbjct: 216 KLLIQARYDVNIKD------------------YDGWTPLHAAAHWGKEEACRILVENLCD 257
Query: 179 VDASTKKGNTALHIAALD 196
++A K G TA +A D
Sbjct: 258 MEAVNKVGQTAFDVADED 275
Score = 53.6 bits (127), Expect = 3e-09
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 107 LRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHT 166
+ A+ ++L+ + + D+ KK +K + A G T
Sbjct: 3 MADAKQKRNEQLKRWIGSETDLEPPVVKRKK---------TKVKFDDGAVFLAACSSGDT 53
Query: 167 TVVKALLKGGCKVDASTKKGNTALHIAA 194
V LL+ G ++ + G TALH A
Sbjct: 54 EEVLRLLERGADINYANVDGLTALHQAC 81
Score = 49.3 bits (116), Expect = 8e-08
Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 26/104 (25%)
Query: 73 LRAARAGHLDKLRELLEAGVDINTSNAS--------DPNTSFLRAARAGHLDKLRELLEA 124
+ A+ ++L+ + + D+ D FL A +G +++ LLE
Sbjct: 3 MADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER 62
Query: 125 GVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTV 168
G DIN +N +GL ALH A D + +
Sbjct: 63 GADINYAN------------------VDGLTALHQACIDDNVDM 88
Score = 47.0 bits (110), Expect = 4e-07
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 20/99 (20%)
Query: 17 KKEKEEERKEEEEEEEKNISAIGPAVTKLRQEAKIHNAVISLEPCYDCYSDPNTSFLRAA 76
+K E+ ++ E + R++ K+ D FL A
Sbjct: 8 QKRNEQLKRWIGSETDLEPP------VVKRKKTKVKF-------------DDGAVFLAAC 48
Query: 77 RAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHL 115
+G +++ LLE G DIN +N D T+ +A ++
Sbjct: 49 SSGDTEEVLRLLERGADINYAN-VDGLTALHQACIDDNV 86
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 55.9 bits (133), Expect = 4e-10
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 151 NNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAA 194
+G + LAA++G VV L++ G V+A +TA +A
Sbjct: 219 EDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQ 262
Score = 50.9 bits (120), Expect = 3e-08
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 18/75 (24%)
Query: 100 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHL 159
D T + AA+ G ++ + L++ G + + A L
Sbjct: 219 EDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD------------------ATDHTARQL 260
Query: 160 AAKDGHTTVVKALLK 174
A + H +V +
Sbjct: 261 AQANNHHNIVDIFDR 275
Score = 45.9 bits (107), Expect = 1e-06
Identities = 15/93 (16%), Positives = 22/93 (23%), Gaps = 27/93 (29%)
Query: 107 LRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHT 166
L AG + V+I + LH A +
Sbjct: 6 LHTEAAGSYAITEPITRESVNIIDPR-------------------HNRTVLHWIASNSSA 46
Query: 167 TVVKALL--------KGGCKVDASTKKGNTALH 191
+ L+ G V+A NT L
Sbjct: 47 EKSEDLIVHEAKECIAAGADVNAMDCDENTPLM 79
Score = 41.3 bits (95), Expect = 4e-05
Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 60 PCYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLR 119
D T + AA+ G ++ + L++ G + +A+D +T+ A H + +
Sbjct: 213 NKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATD-HTARQLAQANNHHNIVD 271
Query: 120 ELLEA 124
Sbjct: 272 IFDRC 276
Score = 37.8 bits (86), Expect = 6e-04
Identities = 13/68 (19%), Positives = 20/68 (29%), Gaps = 10/68 (14%)
Query: 73 LRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELL--------EA 124
L AG + V+I T A +K +L+ A
Sbjct: 6 LHTEAAGSYAITEPITRESVNIIDPR--HNRTVLHWIASNSSAEKSEDLIVHEAKECIAA 63
Query: 125 GVDINTSN 132
G D+N +
Sbjct: 64 GADVNAMD 71
Score = 36.3 bits (82), Expect = 0.002
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 157 LHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAA 194
LH A G + + + + + + T LH A
Sbjct: 6 LHTEAA-GSYAITEPITRESVNI-IDPRHNRTVLHWIA 41
Score = 26.6 bits (57), Expect = 2.6
Identities = 6/35 (17%), Positives = 11/35 (31%)
Query: 69 NTSFLRAARAGHLDKLRELLEAGVDINTSNASDPN 103
T A +K +L+ + +D N
Sbjct: 34 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN 68
Score = 25.1 bits (53), Expect = 7.9
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 151 NNGLNALHLAAKDGHTTVVKAL-LKGGCKVDASTKKGNTALHIAA 194
G ALH AA+ + +VK L + G D + G T + +AA
Sbjct: 185 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAA 229
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 53.7 bits (127), Expect = 8e-10
Identities = 30/141 (21%), Positives = 42/141 (29%), Gaps = 13/141 (9%)
Query: 67 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGV 126
D L AARAG D++R L+ G T ++
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60
Query: 127 DINTSNATSKKLDNQLNIH-------------QKNIKNNGLNALHLAAKDGHTTVVKALL 173
D T + H + ALH A + H VV+ L+
Sbjct: 61 DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120
Query: 174 KGGCKVDASTKKGNTALHIAA 194
K G V +K TA I+
Sbjct: 121 KYGADVHTQSKFCKTAFDISI 141
Score = 34.4 bits (77), Expect = 0.004
Identities = 4/30 (13%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 143 NIHQKNIKNNGLNALHLAAKDGHTTVVKAL 172
++H ++ A ++ +G+ + + L
Sbjct: 125 DVHTQS--KFCKTAFDISIDNGNEDLAEIL 152
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 55.1 bits (131), Expect = 9e-10
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 15/133 (11%)
Query: 62 YDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLREL 121
+ + T AA+ + +++ S ++ + L L
Sbjct: 183 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENL 242
Query: 122 LEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDA 181
+ N NA +NG L++AA+ G+ ++V ALL G
Sbjct: 243 DLKWIIANMLNAQD---------------SNGDTCLNIAARLGNISIVDALLDYGADPFI 287
Query: 182 STKKGNTALHIAA 194
+ K G + A
Sbjct: 288 ANKSGLRPVDFGA 300
Score = 45.4 bits (106), Expect = 2e-06
Identities = 16/124 (12%), Positives = 31/124 (25%), Gaps = 17/124 (13%)
Query: 70 TSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDIN 129
R + L + N+ S + + + +++N
Sbjct: 41 AFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLN 100
Query: 130 TSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTA 189
+ +G LH + +VK L+K G G +
Sbjct: 101 IP-----------------VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESC 143
Query: 190 LHIA 193
L A
Sbjct: 144 LVKA 147
Score = 43.1 bits (100), Expect = 1e-05
Identities = 26/215 (12%), Positives = 62/215 (28%), Gaps = 36/215 (16%)
Query: 15 LEKKEKEEERKEEEEEEEKNISAIGPAVTKLRQEAKIHNAVISLEPCYDCYSDPNTSFLR 74
+ + E N + L QE L NT
Sbjct: 54 MPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW 113
Query: 75 AARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHL-------DKLRELLEAGVD 127
+L+ ++ L++ G + + + + ++A ++ + L L +
Sbjct: 114 LTSIANLELVKHLVKHGSNRLYGD-NMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL 172
Query: 128 INTSNAT-------------------------SKKLDNQLNIHQKNIKNNGLNALHLAAK 162
++ N T + + N ++ N + +
Sbjct: 173 EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG 232
Query: 163 DGHTTVVKALLKG---GCKVDASTKKGNTALHIAA 194
+ ++++ L ++A G+T L+IAA
Sbjct: 233 ERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAA 267
Score = 41.6 bits (96), Expect = 3e-05
Identities = 18/169 (10%), Positives = 45/169 (26%), Gaps = 14/169 (8%)
Query: 27 EEEEEEKNISAIGPAVTKLRQEAKIHNAVISLEPCYDCYSDPNTSFLRAARAGHLDKLRE 86
+ E++ K + + + QE S + S + + +
Sbjct: 32 DNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDA 91
Query: 87 LLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQ 146
+++N NT +L+ ++ L++ G + +
Sbjct: 92 FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD-------------- 137
Query: 147 KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAAL 195
++ + A+ T L + T LH +
Sbjct: 138 NMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIII 186
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 52.5 bits (124), Expect = 4e-09
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 137 KLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAA 194
+L Q + +G +ALH A+ G +V+ L++ G +T L +A
Sbjct: 161 QLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 218
Score = 51.8 bits (122), Expect = 1e-08
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 152 NGLNALHLAAKDGHTTVVKALLK----GGCKVDASTKKGNTALHIA 193
+G LH+A G+ V L+ GG ++D T LH+A
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA 47
Score = 50.2 bits (118), Expect = 3e-08
Identities = 15/110 (13%), Positives = 32/110 (29%), Gaps = 18/110 (16%)
Query: 61 CYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRE 120
S L A + + +LL + +++ A+ G L +R
Sbjct: 136 IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRT 195
Query: 121 LLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVK 170
L+ +G D + N + L +A +++
Sbjct: 196 LVRSGADSSLKN------------------CHNDTPLMVARSRRVIDILR 227
Score = 42.9 bits (99), Expect = 1e-05
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 60 PCYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLR 119
+++ A+ G L +R L+ +G D + N +T + A +D LR
Sbjct: 169 NVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN-CHNDTPLMVARSRRVIDILR 227
Score = 31.4 bits (69), Expect = 0.062
Identities = 13/69 (18%), Positives = 21/69 (30%), Gaps = 22/69 (31%)
Query: 101 DPNTSFLRAARAGHLDKLRELL----EAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNA 156
D +T A G+L + L+ + G +++ N N
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN------------------NLRQTP 43
Query: 157 LHLAAKDGH 165
LHLA
Sbjct: 44 LHLAVITTL 52
Score = 29.8 bits (65), Expect = 0.24
Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Query: 67 DPNTSFLRAARAGHLDKLRELL----EAGVDINTSN 98
D +T A G+L + L+ + G +++ N
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN 37
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 52.1 bits (123), Expect = 6e-09
Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 156 ALHLAAKDGHTTVVKALLK-GGCKVDASTKKGNTALHIAA 194
LH A + V+ LL + + G LH +
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSV 42
Score = 41.7 bits (96), Expect = 2e-05
Identities = 11/76 (14%), Positives = 20/76 (26%), Gaps = 19/76 (25%)
Query: 103 NTSFLRAARAGHLDKLRELLEA-GVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAA 161
N +A K++ELL + + + +G LH +
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKD------------------QDGRIPLHWSV 42
Query: 162 KDGHTTVVKALLKGGC 177
+ LL
Sbjct: 43 SFQAHEITSFLLSKME 58
Score = 41.7 bits (96), Expect = 3e-05
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Query: 151 NNGLNALHLAAKDGHTTVVKALL-KGGCKVDASTKKGNTALHIAA 194
G L A +GH L+ K G + D KG A +A
Sbjct: 170 KQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 214
Score = 39.0 bits (89), Expect = 2e-04
Identities = 9/58 (15%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Query: 69 NTSFLRAARAGHLDKLRELLEA-GVDINTSNASDPNTSFLRAARAGHLDKLRELLEAG 125
N +A K++ELL + + + D + + LL
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKD-QDGRIPLHWSVSFQAHEITSFLLSKM 57
Score = 31.3 bits (69), Expect = 0.067
Identities = 18/80 (22%), Positives = 24/80 (30%), Gaps = 24/80 (30%)
Query: 103 NTSFLRAARAGHLDKLRELLEA-GVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAA 161
T A GH D L+E G + + + N G A +A
Sbjct: 173 WTPLFHALAEGHGDAAVLLVEKYGAEYDLVD------------------NKGAKAEDVAL 214
Query: 162 KDGHTTVVKALLKGGCKVDA 181
+ V K L VDA
Sbjct: 215 ---NEQVKKFFLNNV--VDA 229
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 52.4 bits (124), Expect = 7e-09
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 149 IKNNGLNALHLAAKDGHTTVVKALLKGGCK---VDASTKKGNTALHIAA 194
+ +G ALHLA H + LL +D G TALH+AA
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAA 53
Score = 46.2 bits (108), Expect = 7e-07
Identities = 14/79 (17%), Positives = 18/79 (22%), Gaps = 18/79 (22%)
Query: 102 PNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAA 161
T A A L LL+AG D G L A
Sbjct: 192 GRTPLHLAVEAQAASVLELLLKAGADPTARM------------------YGGRTPLGSAL 233
Query: 162 KDGHTTVVKALLKGGCKVD 180
+ + + L G
Sbjct: 234 LRPNPILARLLRAHGAPEP 252
Score = 43.9 bits (102), Expect = 4e-06
Identities = 29/164 (17%), Positives = 44/164 (26%), Gaps = 29/164 (17%)
Query: 60 PCYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDIN---------TSNASDPNTSFLRAA 110
+T+ A R LL+ S P+TS AA
Sbjct: 70 GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAA 129
Query: 111 RA----GHLDKLRELLEAGVDINTSN----------------ATSKKLDNQLNIHQKNIK 150
++ + + + N + L + K
Sbjct: 130 VDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189
Query: 151 NNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAA 194
G LHLA + +V++ LLK G A G T L A
Sbjct: 190 TCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSAL 233
Score = 40.1 bits (92), Expect = 8e-05
Identities = 25/160 (15%), Positives = 41/160 (25%), Gaps = 23/160 (14%)
Query: 67 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPN--TSFLRAARAGHLDKLRELLEA 124
D +T+ A H L LL + + T+ AA G + +L
Sbjct: 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL--- 64
Query: 125 GVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTK 184
+ G ALHLA + T LL+ +
Sbjct: 65 ---------------YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHP---R 106
Query: 185 KGNTALHIAALDSLVTDIASSAITDATSLPCSVILRTLRS 224
+ + D + A D+ P +
Sbjct: 107 DASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDED 146
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 51.4 bits (122), Expect = 2e-08
Identities = 25/183 (13%), Positives = 42/183 (22%), Gaps = 36/183 (19%)
Query: 27 EEEEEEKNISAIGPAVTKLRQEAKIHNAVISLEPCYDCYSDPNTSFLRAARAGHLDKLRE 86
E E + + I + + + I +SL +
Sbjct: 8 ENYENDPQLRLIPWILWENLFQHFISANELSL---MTLSYKEAIHIFLPGTKNMEQVRQL 64
Query: 87 LLEAGVDINTSNAS----------DPNTSFLRAARAGHLDKL---RELLEAGVDINTSNA 133
L N + AA G L LL + +
Sbjct: 65 LCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQ- 123
Query: 134 TSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKK--GNTALH 191
A LAA++GH V+ L + + + A
Sbjct: 124 -----------------AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFR 166
Query: 192 IAA 194
+AA
Sbjct: 167 LAA 169
Score = 50.3 bits (119), Expect = 4e-08
Identities = 26/140 (18%), Positives = 40/140 (28%), Gaps = 16/140 (11%)
Query: 69 NTSFLRAARAGHLDKLRELLEAGVDINTSNASDPN-TSFLRAARAGHLDKLRELLEAGVD 127
+F AA GHL L L E + N +F AA GHL L L E
Sbjct: 127 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPT 186
Query: 128 INTSNATSKKLDNQLNIHQK-----------NIKNNGLNALHLAAKDGHTTVVKALLKGG 176
T+ ++ + A + G V + +
Sbjct: 187 EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHV 246
Query: 177 CKVDASTKKGNTALHIAALD 196
K+ + A ++ D
Sbjct: 247 ----NRLKEMHDAFKLSNPD 262
Score = 46.4 bits (109), Expect = 8e-07
Identities = 16/116 (13%), Positives = 30/116 (25%), Gaps = 20/116 (17%)
Query: 58 LEPCYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDK 117
+ + + + +F + G D + + + +R LD
Sbjct: 242 IARHVNRLKEMHDAFKLSNPDGVFDLVTKS-------ECLQGFYMLRNLIRRNDEVLLDD 294
Query: 118 LRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALL 173
+R LL I + L LA + G+ LL
Sbjct: 295 IRFLLSIPGIKA-------------LAPTATIPGDANELLRLALRLGNQGACALLL 337
Score = 46.0 bits (108), Expect = 1e-06
Identities = 18/144 (12%), Positives = 35/144 (24%), Gaps = 18/144 (12%)
Query: 61 CYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRE 120
+ A GH + + LL+ V + + + G
Sbjct: 190 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAE--------IHEFEYGEKYVNPF 241
Query: 121 LLEAGVDINTSNATSKKL--DNQLNIHQKNIKNNG---LNALHLAAKDGHTTVVKALLKG 175
+ + + K D ++ K+ G L L + ++ LL
Sbjct: 242 IARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSI 301
Query: 176 GC-----KVDASTKKGNTALHIAA 194
N L +A
Sbjct: 302 PGIKALAPTATIPGDANELLRLAL 325
Score = 33.3 bits (75), Expect = 0.016
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 5/79 (6%)
Query: 49 AKIHNAVISLEPCYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNAS----DPNT 104
+++ C + + +R LD +R LL + + D N
Sbjct: 261 PDGVFDLVTKSECLQGF-YMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANE 319
Query: 105 SFLRAARAGHLDKLRELLE 123
A R G+ LL
Sbjct: 320 LLRLALRLGNQGACALLLS 338
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 48.4 bits (114), Expect = 5e-08
Identities = 17/150 (11%), Positives = 42/150 (28%), Gaps = 29/150 (19%)
Query: 66 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTS--------FLRAARAGHLDK 117
+ S A + + L + GVD+ +R+ L
Sbjct: 4 AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHI 63
Query: 118 LRELLEAGVDINTSNATSKKLDNQLNIHQKNIK---------------NNGLNALHLAAK 162
+ L++ +++ + + +G L +A +
Sbjct: 64 VDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKR 123
Query: 163 DGHTTVVKALLKGGCKVDASTKKGNTALHI 192
H + L + A + + N+ +H+
Sbjct: 124 LKHEHCEELLTQ------ALSGRFNSHVHV 147
Score = 39.2 bits (90), Expect = 1e-04
Identities = 19/134 (14%), Positives = 35/134 (26%), Gaps = 48/134 (35%)
Query: 97 SNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNA 156
++ + S A + + L + GVD+ + N A
Sbjct: 1 ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLA------------NGHEPDETA 48
Query: 157 LHLAAK---DGHTTVVKALLKGGCKV---------------------------------D 180
LHLA + +V L++ + +
Sbjct: 49 LHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE 108
Query: 181 ASTKKGNTALHIAA 194
+ + G T L IA
Sbjct: 109 IANESGETPLDIAK 122
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 48.0 bits (112), Expect = 2e-07
Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 152 NGLNALHLAAKDGHTTVVKALLK----GGCKVDASTKKGNTALHIA 193
+G + LHLA + +++ ++ T LH+A
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA 46
Score = 41.8 bits (96), Expect = 2e-05
Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 18/128 (14%)
Query: 60 PCYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLR 119
+ +T A+ G+L + L+ G D+N + T+ A + D +
Sbjct: 103 ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVS 162
Query: 120 ELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKV 179
LL+ G D+N G + L T + + L + +
Sbjct: 163 LLLKCGADVNRVT------------------YQGYSPYQLTWGRPSTRIQQQLGQLTLEN 204
Query: 180 DASTKKGN 187
+
Sbjct: 205 LQMLPESE 212
Score = 36.8 bits (83), Expect = 0.001
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 145 HQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAA 194
NG ALHLA + +V LLK G V+ T +G + +
Sbjct: 137 VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTW 186
Score = 34.5 bits (77), Expect = 0.006
Identities = 10/81 (12%), Positives = 26/81 (32%), Gaps = 1/81 (1%)
Query: 61 CYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRE 120
+ T+ A + D + LL+ G D+N + + ++
Sbjct: 138 NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT-YQGYSPYQLTWGRPSTRIQQQ 196
Query: 121 LLEAGVDINTSNATSKKLDNQ 141
L + ++ S+ ++
Sbjct: 197 LGQLTLENLQMLPESEDEESY 217
Score = 26.8 bits (57), Expect = 1.9
Identities = 9/65 (13%), Positives = 17/65 (26%), Gaps = 14/65 (21%)
Query: 101 DPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLA 160
D ++ A E++ + ++ +N N LHLA
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQV------------KGDLAFLNFQN--NLQQTPLHLA 46
Query: 161 AKDGH 165
Sbjct: 47 VITNQ 51
Score = 26.8 bits (57), Expect = 2.0
Identities = 5/36 (13%), Positives = 10/36 (27%), Gaps = 4/36 (11%)
Query: 67 DPNTSFLRAARAGHLDKLRELLE----AGVDINTSN 98
D ++ A E++ +N N
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQN 36
Score = 24.9 bits (52), Expect = 7.8
Identities = 4/10 (40%), Positives = 8/10 (80%)
Query: 186 GNTALHIAAL 195
G++ LH+A +
Sbjct: 2 GDSFLHLAII 11
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 46.8 bits (109), Expect = 3e-07
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 155 NALHLAAKDGHTTVVKALLKGGCKVDASTKKGN 187
N L AA G + +LL+ V+A G
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGR 35
Score = 37.6 bits (85), Expect = 3e-04
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 143 NIHQKNIKNN-GLNALHLAAKDGHTTVVKALLKGG 176
+N+ G A LA G VV + G
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 37.2 bits (84), Expect = 4e-04
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 75 AARAGHLDKLRELLEAGVDINTSN 98
AA G L++L LL+ V++N N
Sbjct: 8 AAARGDLEQLTSLLQNNVNVNAQN 31
Score = 37.2 bits (84), Expect = 4e-04
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 109 AARAGHLDKLRELLEAGVDINTSN 132
AA G L++L LL+ V++N N
Sbjct: 8 AAARGDLEQLTSLLQNNVNVNAQN 31
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 43.0 bits (99), Expect = 3e-06
Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 15/122 (12%)
Query: 67 DPNTSFL-RAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAG 125
+P+ +L AA G ++++R LLEAG + N N+ + + + +L L A
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 126 VDINTSNATSKKLDNQLNIHQKNIK--------------NNGLNALHLAAKDGHTTVVKA 171
+ ++ + + + G + LA + GH V +
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120
Query: 172 LL 173
L
Sbjct: 121 LR 122
Score = 38.4 bits (87), Expect = 1e-04
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 155 NALHLAAKDGHTTVVKALLKGGCKVDA 181
+ L AA G V+ALL+ G +A
Sbjct: 5 DWLATAAARGRVEEVRALLEAGANPNA 31
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 41.2 bits (95), Expect = 1e-05
Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 16/109 (14%)
Query: 102 PNTSFLRAARAGHLDKLRELLEAGVDINTSNA---------------TSKKLDNQLNIHQ 146
P L ++ G D ++ ++ D + N K Q ++
Sbjct: 1 PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV 60
Query: 147 KNIKNNGLNALHLAAKDGHTTVVKALLKGGCKVDASTKK-GNTALHIAA 194
++G LH AA + V K L++ G V A T TA
Sbjct: 61 NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCE 109
Score = 39.3 bits (90), Expect = 6e-05
Identities = 13/130 (10%), Positives = 31/130 (23%), Gaps = 19/130 (14%)
Query: 68 PNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKL--------- 118
P L ++ G D ++ ++ D + N
Sbjct: 1 PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV 60
Query: 119 -------RELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHL--AAKDGHTTVV 169
L N +++ + ++ A ++G+T
Sbjct: 61 NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMT-YSDMQTAADKCEEMEEGYTQCS 119
Query: 170 KALLKGGCKV 179
+ L K+
Sbjct: 120 QFLYGVQEKM 129
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 39.0 bits (89), Expect = 1e-04
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 155 NALHLAAKDGHTTVVKALL-KGGCKVDASTKKGNT 188
+ L AA G V+ LL + DA + G T
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKT 38
Score = 37.1 bits (84), Expect = 5e-04
Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 15/136 (11%)
Query: 73 LRAARAGHLDKLRELLEA-GVDINTSNASD-------------PNTSFLRAARAGHLDKL 118
AA G + ++R LL V + N L+ + ++
Sbjct: 7 SGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQDT 66
Query: 119 RELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKALLKGGCK 178
T + K+ + G +HLA ++GHT VV L
Sbjct: 67 SGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESD 125
Query: 179 VDASTKKGNTALHIAA 194
+ +G T L +A
Sbjct: 126 LHRRDARGLTPLELAL 141
Score = 35.6 bits (80), Expect = 0.002
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 143 NIHQKNIKNNGLNALHLAAKDGHTTVVKALL 173
++H+++ GL L LA + G +V L
Sbjct: 125 DLHRRD--ARGLTPLELALQRGAQDLVDILQ 153
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 39.0 bits (89), Expect = 2e-04
Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 18/71 (25%)
Query: 102 PNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAA 161
T AAR G + + LL+ + ++ + +A+
Sbjct: 156 DETPLFLAAREGSYEASKALLDNFANREITD------------------HMDRLPRDVAS 197
Query: 162 KDGHTTVVKAL 172
+ H +V+ L
Sbjct: 198 ERLHHDIVRLL 208
Score = 39.0 bits (89), Expect = 2e-04
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 157 LHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAA 194
L LAA++G KALL + + +A+
Sbjct: 160 LFLAAREGSYEASKALLDNFANREITDHMDRLPRDVAS 197
Score = 38.2 bits (87), Expect = 3e-04
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 17/55 (30%)
Query: 118 LRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNGLNALHLAAKDGHTTVVKAL 172
+ +LL G ++N +D G +LHLAA+ K L
Sbjct: 5 ISDLLAQGAELN------ATMDK-----------TGETSLHLAARFARADAAKRL 42
Score = 36.7 bits (83), Expect = 0.001
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 168 VVKALLKGGCKVDAST-KKGNTALHIAA 194
V+ LL G +++A+ K G T+LH+AA
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAA 31
Score = 35.5 bits (80), Expect = 0.002
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 84 LRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLREL 121
+ +LL G ++N + TS AAR D + L
Sbjct: 5 ISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42
Score = 32.8 bits (73), Expect = 0.019
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 61 CYDCYSDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRE 120
T AAR G + + LL+ + ++ D A+ H D +
Sbjct: 149 RDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMD-RLPRDVASERLHHD-IVR 206
Query: 121 LLE 123
LL+
Sbjct: 207 LLD 209
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 36.4 bits (82), Expect = 6e-04
Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 15/107 (14%)
Query: 103 NTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKN----------- 151
+ F+ A + G LD++++ + G D+N + +K + +
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 62
Query: 152 ----NGLNALHLAAKDGHTTVVKALLKGGCKVDASTKKGNTALHIAA 194
+ + L A +GH + VK LL G G TAL
Sbjct: 63 APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD 109
Score = 34.9 bits (78), Expect = 0.002
Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 18/120 (15%)
Query: 69 NTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEAGVDI 128
+ F+ A + G LD++++ + G D+N + A LL+
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 62
Query: 129 NTSNATSKKLDNQLNIHQKNIK--------------NNGLNALHLAAKDGHTTVVKALLK 174
L + + + +GL AL +KALL+
Sbjct: 63 APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQ----AIKALLQ 118
>d1q1ra3 d.87.1.1 (A:320-422) Putidaredoxin reductase {Pseudomonas
putida [TaxId: 303]}
Length = 103
Score = 28.2 bits (63), Expect = 0.30
Identities = 5/39 (12%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 77 RAGHLDKLRELLEAGVDINTSNASDPNT---SFLRAARA 112
R ++ ++++ + + + D + + AA+A
Sbjct: 60 RPVEFNQSKQIITDRLPVEPNLLGDESVPLKEIIAAAKA 98
>d1x25a1 d.79.1.1 (A:1-124) Hypothetical protein ST0811 {Sulfolobus
tokodaii [TaxId: 111955]}
Length = 124
Score = 26.7 bits (58), Expect = 1.4
Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 94 INTSNASDPNTSFLRAARAGHLDKLRELLEAGVDINTSNATSKKLDNQLNIHQKNIKNNG 153
+ T A P + +A + G+ L + +D T+ + Q NIK
Sbjct: 4 VFTEKAPKPVGPYSQAIKVGNT--LYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIV 61
Query: 154 LNALHLAAKDGHTTV 168
A + V
Sbjct: 62 KAAGFSLSDVAMAFV 76
>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum)
[TaxId: 4682]}
Length = 425
Score = 27.4 bits (60), Expect = 1.6
Identities = 5/59 (8%), Positives = 21/59 (35%)
Query: 66 SDPNTSFLRAARAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEA 124
P+ ++++ D + ++ + ++ ++R + D +L+
Sbjct: 359 PSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYY 417
>d1x8da1 d.58.4.21 (A:1-104) L-rhamnose mutarotase YiiL
{Escherichia coli [TaxId: 562]}
Length = 104
Score = 25.9 bits (57), Expect = 2.0
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 8/50 (16%)
Query: 24 RKEEEEEEEKNISAIGPAVTKLRQEAKIHNAVISLEPCYDCYSDPNTSFL 73
+ EE ++ + I P + + + HN Y Y D + L
Sbjct: 11 NPDAHEEYQRRHNPIWPELEAVLKSHGAHN--------YAIYLDKARNLL 52
>d1d7ya3 d.87.1.1 (A:309-405) NADH-dependent ferredoxin reductase,
BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 97
Score = 25.2 bits (55), Expect = 3.0
Identities = 13/48 (27%), Positives = 17/48 (35%), Gaps = 12/48 (25%)
Query: 77 RAGHLDKLRELLEAGVDINTSNASDPNTSFLRAARAGHLDKLRELLEA 124
A LR LL G + + +DP T LR+L A
Sbjct: 62 NARDFAPLRRLLAVGAKPDRAALADPATD------------LRKLAAA 97
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal
domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 282
Score = 26.2 bits (57), Expect = 3.4
Identities = 6/41 (14%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 116 DKLRELLEAGVD---INTSNATSKKLDNQLNIHQKNIKNNG 153
+ L+E++++G++ +N S+ T + + + ++
Sbjct: 47 ETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFA 87
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate
dehydrogenase (IMPDH) {Thermotoga maritima [TaxId:
2336]}
Length = 330
Score = 26.2 bits (57), Expect = 3.9
Identities = 14/84 (16%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 115 LDKLRELLEAGVD---INTSNATSKKLDNQLNIHQKNIKNN----GLNALHLAAKDGHTT 167
++++ +L++AGVD I+T++ S+++ L + + + + G A +
Sbjct: 100 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKA 159
Query: 168 VVKALLKGGCKVDASTKKGNTALH 191
A+ G T + +
Sbjct: 160 GADAVKVGVGPGSICTTRVVAGVG 183
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 25.1 bits (55), Expect = 6.6
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 14 MLEKKEKEEERKEEEEEEEK 33
+ K+EK + ++E E+ ++
Sbjct: 118 QMSKEEKLKIKEENEKLLKE 137
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 246
Score = 24.9 bits (54), Expect = 7.7
Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 10/39 (25%)
Query: 116 DKLRELLEAGVD---INTSNATSKKLDNQLNIHQKNIKN 151
+ L ++L+AG++ +N S+ + H + I+N
Sbjct: 18 EMLAKMLDAGMNVMRLNFSHGDYAE-------HGQRIQN 49
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 24.7 bits (54), Expect = 8.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 14 MLEKKEKEEERKEEEEEEEK 33
L +EK++ R E E+ EE
Sbjct: 110 QLTSQEKKQIRLEREKFEED 129
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.311 0.127 0.345
Gapped
Lambda K H
0.267 0.0527 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 755,486
Number of extensions: 33011
Number of successful extensions: 365
Number of sequences better than 10.0: 1
Number of HSP's gapped: 276
Number of HSP's successfully gapped: 125
Length of query: 225
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 143
Effective length of database: 1,281,736
Effective search space: 183288248
Effective search space used: 183288248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 51 (23.9 bits)