BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10606
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B5E022|QVR_DROPS Protein quiver OS=Drosophila pseudoobscura pseudoobscura GN=qvr
PE=3 SV=2
Length = 159
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 30/135 (22%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVI-----CRKIIQK 56
SI CY+C+S D RC DPF+ +L P + Q P++ C K+++
Sbjct: 39 SIYCYECDSWTDARCKDPFNYTAL----------PRD------QPPLMTCNGCCVKMVRH 82
Query: 57 IYSKRRVVRGCGYINEERDDCYRRTGTFDVDST----YCACKGDICNGSPSL---GQSTS 109
S+ V R C ++ + + + ++S+ C C+ D+CN S L G
Sbjct: 83 QRSREVVRRMC--TSQLQINLFMVDHVCMMESSGNGHMCFCEEDMCNSSKDLYSHGHQLH 140
Query: 110 LVVTSLLAAVVLLAQ 124
L++T +A L+ Q
Sbjct: 141 LIITIAVAVSWLMGQ 155
>sp|B4GAN3|QVR_DROPE Protein quiver OS=Drosophila persimilis GN=qvr PE=3 SV=2
Length = 160
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 41/141 (29%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVI-----CRKIIQK 56
SI CY+C+S D RC DPF+ +L P + Q P++ C K+++
Sbjct: 39 SIYCYECDSWTDARCKDPFNYTAL----------PRD------QPPLMTCNGCCVKMVRH 82
Query: 57 IYSKRRVVRGCGYINEERDDCYRRTGTFDVDST----------YCACKGDICNGSPSL-- 104
S+ VVR + F VD C C+ D+CN S L
Sbjct: 83 QRSRYEVVR-------RMCTSQLQINLFMVDHVCMMESSGNGHMCFCEEDMCNSSKDLYS 135
Query: 105 -GQSTSLVVTSLLAAVVLLAQ 124
G L++T +A L+ Q
Sbjct: 136 HGHQLHLIITIAVAVSWLMGQ 156
>sp|B4J8Z9|QVR_DROGR Protein quiver OS=Drosophila grimshawi GN=qvr PE=3 SV=2
Length = 161
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 30/137 (21%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVI-----CRKIIQK 56
SI CY+C+S D RC DPF+ +L P + Q P++ C K+++
Sbjct: 38 SIYCYECDSWTDARCKDPFNYTAL----------PRD------QPPLMTCNGCCVKMVRH 81
Query: 57 IYSKRRVVRGCGYINEERDDCYRRTGTFDVDST----YCACKGDICNGSPSL----GQST 108
S+ VVR ++ + + + ++S+ C C+ D+CN S SL
Sbjct: 82 QRSRYEVVRRMC-TSQLQINLFMVDHVCMMESSGNGHMCFCEEDMCNSSKSLYSFANGYN 140
Query: 109 SLVVTSLLAAVVLLAQN 125
L++ +L + LL Q
Sbjct: 141 HLIIITLTPWLKLLLQQ 157
>sp|B3MFC2|QVR_DROAN Protein quiver OS=Drosophila ananassae GN=qvr PE=3 SV=2
Length = 159
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 25/112 (22%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVI-----CRKIIQK 56
SI CY+C+S D RC DPF+ +L P + Q P++ C K+++
Sbjct: 38 SIYCYECDSWTDARCKDPFNYTAL----------PRD------QPPLMTCNGCCVKMVRH 81
Query: 57 IYSKRRVVRGCGYINEERDDCYRRTGTFDVDST----YCACKGDICNGSPSL 104
S VVR ++ + + + ++S+ C C+ D+CN S L
Sbjct: 82 QRSPYEVVRRMMCTSQLQINLFMVDHVCMMESSGNGHMCFCEEDMCNSSKDL 133
>sp|B4LQ44|QVR_DROVI Protein quiver OS=Drosophila virilis GN=qvr PE=3 SV=2
Length = 159
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 33/137 (24%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVI-----CRKIIQK 56
SI CY+C+S D RC DPF+ +L P + Q P++ C K+++
Sbjct: 38 SIYCYECDSWTDARCKDPFNYTAL----------PRD------QPPLMTCNGCCVKMVRH 81
Query: 57 IYSKRRVVRGCGYINEERDDCYRRTGTFDVDST----YCACKGDICNGSPSL-----GQS 107
S+ VVR ++ + + + ++S+ C C+ D+CN S SL G
Sbjct: 82 QRSRYEVVRRMC-TSQLQINLFMVDHVCMMESSGNGHMCFCEEDMCNSSKSLYSFANGYQ 140
Query: 108 TSLVVTSLLAAVVLLAQ 124
+++T + ++LLA+
Sbjct: 141 HLMLIT--MPWLILLAK 155
>sp|B4KR21|QVR_DROMO Protein quiver OS=Drosophila mojavensis GN=qvr PE=3 SV=2
Length = 159
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 33/137 (24%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVI-----CRKIIQK 56
SI CY+C+S D RC DPF+ +L P + Q P++ C K+++
Sbjct: 38 SIYCYECDSWTDARCKDPFNYTAL----------PRD------QPPLMTCNGCCVKMVRH 81
Query: 57 IYSKRRVVRGCGYINEERDDCYRRTGTFDVDST----YCACKGDICNGSPSL-----GQS 107
S VVR ++ + + + ++S+ C C+ D+CN S SL G
Sbjct: 82 QRSPYEVVRRMC-TSQLQINLFMVDHVCMMESSGNGHMCFCEEDMCNSSQSLYSFANGYQ 140
Query: 108 TSLVVTSLLAAVVLLAQ 124
+++T + ++LL Q
Sbjct: 141 QLIIIT--MPWLILLQQ 155
>sp|B4MQJ1|QVR_DROWI Protein quiver OS=Drosophila willistoni GN=qvr PE=3 SV=2
Length = 161
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 38/118 (32%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVI-----CRKIIQK 56
SI CY+C+S D RC DPF+ +L P + Q P++ C K+++
Sbjct: 39 SIYCYECDSWTDARCKDPFNYTAL----------PRD------QPPLMTCNGCCVKMVRH 82
Query: 57 IYSKRRVVRGCGYINEERDDCYRRTGTFDVDST----------YCACKGDICNGSPSL 104
S+ VVR + F VD C C+ D+CN S +L
Sbjct: 83 QRSRYEVVR-------RMCTSQLQINLFMVDHVCMMESSGNGHMCFCEEDMCNSSKNL 133
>sp|B4P641|QVR_DROYA Protein quiver OS=Drosophila yakuba GN=qvr PE=3 SV=1
Length = 158
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSL 25
SI CY+C+S D RC DPF+ +L
Sbjct: 38 SIYCYECDSWTDARCKDPFNYTAL 61
>sp|B5A5T4|QVR_DROME Protein quiver OS=Drosophila melanogaster GN=qvr PE=1 SV=2
Length = 158
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSL 25
SI CY+C+S D RC DPF+ +L
Sbjct: 38 SIYCYECDSWTDARCKDPFNYTAL 61
>sp|B3NSF6|QVR_DROER Protein quiver OS=Drosophila erecta GN=qvr PE=3 SV=1
Length = 158
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSL 25
SI CY+C+S D RC DPF+ +L
Sbjct: 38 SIYCYECDSWTDARCKDPFNYTAL 61
>sp|B4HNI3|QVR_DROSE Protein quiver OS=Drosophila sechellia GN=qvr PE=3 SV=2
Length = 158
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSL 25
SI CY+C+S D RC DPF+ +L
Sbjct: 38 SIYCYECDSWTDARCKDPFNYTAL 61
>sp|B4QBL6|QVR_DROSI Protein quiver OS=Drosophila simulans GN=qvr PE=3 SV=2
Length = 158
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVI-----CRKIIQK 56
SI CY+C+S D RC DPF +L P + Q P++ C K+++
Sbjct: 38 SIYCYECDSWTDARCKDPFHYTAL----------PRD------QPPLMTCNGCCVKMVRH 81
Query: 57 IYSKRRVVRGCGYINEERDDCYRRTGTFDVDST----YCACKGDICNGSPSL 104
S+ VVR ++ + + + ++S+ C C+ D+CN S +L
Sbjct: 82 QRSRYEVVRR-MCTSQLQINLFMVDHVCMMESSGNGHMCFCEEDMCNSSKNL 132
>sp|Q4UK24|NUOI_RICFE NADH-quinone oxidoreductase subunit I OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=nuoI PE=3 SV=1
Length = 159
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 72 EERDDCYRRTGTFDVDSTYC--------ACKGDICNGSPSLGQSTSLVVTSLLAAVVLLA 123
+ERDD RRT +D+D T C AC D P+ + SL T+L+ L
Sbjct: 80 DERDDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNF-EFASLTHTALIYDKERLL 138
Query: 124 QN 125
QN
Sbjct: 139 QN 140
>sp|Q3Z6A1|GATB_DEHE1 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Dehalococcoides ethenogenes (strain 195) GN=gatB PE=3
SV=1
Length = 492
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 22 PYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRT 81
PYSL +N S +P+ E + + +TP R+ + K+ R ++R G +D
Sbjct: 142 PYSLLDINRSSIPLMEIVSEPDMRTPEEARQYLMKL---RTIMRYLGVSTANMED----- 193
Query: 82 GTFDVDSTYCACKGDICNGSPSLG 105
G+F D+ GSP LG
Sbjct: 194 GSFRCDANISIRP----EGSPELG 213
>sp|Q9ZCF8|NUOI_RICPR NADH-quinone oxidoreductase subunit I OS=Rickettsia prowazekii
(strain Madrid E) GN=nuoI PE=3 SV=1
Length = 159
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 71 NEERDDCYRRTGTFDVDSTYCACKGDICNGSP--SLGQSTSLVVTSLLAAVVLLAQNRLL 128
++ERDD RRT +D+D T C G P ++ + + SL ++ + RLL
Sbjct: 79 SDERDDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNFEFASLTHTALIYDKERLL 138
>sp|Q68VV4|NUOI_RICTY NADH-quinone oxidoreductase subunit I OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=nuoI PE=3 SV=1
Length = 159
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 71 NEERDDCYRRTGTFDVDSTYCACKGDICNGSP--SLGQSTSLVVTSLLAAVVLLAQNRLL 128
++ERDD RRT +D+D T C G P ++ + + SL ++ + RLL
Sbjct: 79 SDERDDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNFEFASLTHTALIYDKERLL 138
>sp|A8GPY5|NUOI_RICAH NADH-quinone oxidoreductase subunit I OS=Rickettsia akari (strain
Hartford) GN=nuoI PE=3 SV=1
Length = 159
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 72 EERDDCYRRTGTFDVDSTYCACKGDICNGSP--SLGQSTSLVVTSLLAAVVLLAQNRLL 128
+ER+D RRT +D+D T C G P ++ + + SL A ++ + RLL
Sbjct: 80 DEREDGSRRTTRYDIDMTKCIYCGLCQEACPVDAIVEGPNFEFASLTHAALIYDKERLL 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,457,323
Number of Sequences: 539616
Number of extensions: 1975355
Number of successful extensions: 3565
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3540
Number of HSP's gapped (non-prelim): 29
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)