Query psy10606
Match_columns 128
No_of_seqs 103 out of 421
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 22:40:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10606.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10606hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l03_A LY-6/neurotoxin-like pr 98.8 3.1E-08 1E-12 61.2 8.3 72 2-100 1-74 (74)
2 2j8b_A CD59 glycoprotein; lipi 98.8 1.3E-08 4.4E-13 64.1 5.9 74 3-104 2-76 (79)
3 3neq_A Muscarinic M1-toxin1, m 98.6 2.5E-07 8.6E-12 56.1 8.2 65 3-100 1-66 (66)
4 2h7z_B Irditoxin subunit B; th 98.5 4.6E-07 1.6E-11 56.6 7.8 66 4-100 9-76 (77)
5 2h7z_A Irditoxin subunit A; th 98.4 1.3E-06 4.4E-11 54.4 7.2 64 4-100 9-74 (75)
6 2pjy_C TGF-beta receptor type- 98.4 6.3E-07 2.1E-11 56.3 5.5 54 47-101 19-77 (79)
7 2jqp_A WEAK toxin 1; protein; 98.4 2.3E-06 8E-11 51.7 7.6 64 3-100 1-65 (65)
8 1ff4_A Muscarinic toxin/acetyl 98.3 1.6E-06 5.4E-11 52.5 6.5 64 3-100 1-65 (65)
9 1hc9_A Alpha-bungarotoxin; tox 98.3 2.8E-06 9.5E-11 52.6 7.7 67 3-104 1-71 (74)
10 2h5f_A Denmotoxin; three-finge 98.3 1.2E-06 4E-11 54.8 5.8 66 4-100 9-76 (77)
11 2l5s_A TGF-beta receptor type- 98.3 2.6E-06 9E-11 54.5 6.7 55 47-102 23-82 (88)
12 1ywh_A Urokinase plasminogen a 98.2 8.9E-07 3E-11 68.6 4.4 78 2-101 191-274 (313)
13 1vyc_A Bucain, neurotoxin; sna 98.2 2.5E-06 8.6E-11 51.6 5.0 64 3-100 1-65 (65)
14 1jgk_A Candoxin; beta sheet, s 98.2 7E-06 2.4E-10 49.7 6.5 66 3-99 1-66 (66)
15 1ntn_A Neurotoxin I; postsynap 98.2 7.9E-06 2.7E-10 50.3 6.8 48 47-104 18-69 (72)
16 1kba_A Kappa-bungarotoxin; 2.3 98.1 5.7E-06 1.9E-10 50.1 5.2 61 3-100 1-66 (66)
17 1cvo_A Cardiotoxin V; cytotoxi 98.0 1E-05 3.6E-10 48.3 5.7 43 47-99 19-62 (62)
18 1mr6_A Neurotoxin; venom; NMR 98.0 3.3E-06 1.1E-10 51.3 3.3 64 3-100 1-68 (68)
19 3era_A Erabutoxin A; snake neu 97.9 0.00011 3.8E-09 43.9 7.9 61 3-99 1-61 (62)
20 3hh7_A Muscarinic toxin-like p 97.8 0.00016 5.3E-09 43.6 8.1 44 47-99 21-64 (65)
21 3laq_U UPAR, U-PAR, urokinase 97.8 5.6E-05 1.9E-09 57.6 7.5 84 1-104 92-180 (277)
22 3laq_U UPAR, U-PAR, urokinase 97.8 2E-05 6.7E-10 60.2 4.9 80 2-103 189-275 (277)
23 1lsi_A LSIII; venom, multigene 97.8 3E-05 1E-09 46.8 4.4 44 47-100 17-64 (66)
24 1vb0_A Cobrotoxin B; short-cha 97.8 0.00021 7.3E-09 42.5 7.8 42 47-100 20-61 (61)
25 3evs_C Bone morphogenetic prot 97.8 5.4E-05 1.9E-09 50.9 5.7 58 47-105 43-102 (119)
26 3plc_A Beta-cardiotoxin OH-27; 97.7 3.6E-05 1.2E-09 46.0 4.2 44 47-100 19-63 (63)
27 1ntx_A Alpha-neurotoxin; NMR { 97.7 0.00021 7.3E-09 42.4 7.4 42 47-100 19-60 (60)
28 2h62_C Bone morphogenetic prot 97.7 4.2E-05 1.4E-09 52.1 4.8 56 47-104 56-113 (129)
29 4aea_A Long neurotoxin 1; thre 97.7 0.00016 5.3E-09 44.4 6.5 47 48-104 18-68 (71)
30 1f94_A Bucandin; three-finger 97.6 2E-05 7E-10 47.3 1.9 61 3-100 1-63 (63)
31 3vts_A Cytotoxin 1; three fing 97.6 0.00015 5E-09 43.2 5.0 43 47-99 19-61 (61)
32 2fd6_U Urokinase plasminogen a 97.4 0.00043 1.5E-08 52.7 6.6 80 1-103 92-182 (276)
33 1ug4_A Cytotoxin 6, cardiotoxi 97.3 0.00044 1.5E-08 40.9 5.0 43 47-99 18-60 (60)
34 1tfs_A Toxin FS2; NMR {Dendroa 97.2 0.00079 2.7E-08 39.8 5.3 42 47-100 19-60 (60)
35 1fas_A Fasciculin 1; toxin; 1. 97.1 0.0026 8.9E-08 37.7 6.9 42 47-100 19-61 (61)
36 1ywh_A Urokinase plasminogen a 97.0 0.0013 4.4E-08 50.9 6.1 82 1-103 91-181 (313)
37 2fd6_U Urokinase plasminogen a 96.7 0.004 1.4E-07 47.3 6.8 78 2-101 192-275 (276)
38 4fao_C Serine/threonine-protei 96.7 0.0047 1.6E-07 40.5 5.9 55 47-106 29-84 (106)
39 1drs_A Dendroaspin; cell adhes 96.1 0.0033 1.1E-07 37.1 2.4 41 47-100 19-59 (59)
40 2h62_D ACVR2B protein; TGF-bet 94.7 0.097 3.3E-06 33.8 5.9 53 47-101 38-94 (98)
41 1bte_A Protein (activin recept 94.4 0.11 3.6E-06 33.5 5.6 54 47-102 33-90 (97)
42 4fao_E Activin receptor type-2 94.2 0.16 5.4E-06 34.1 6.3 54 47-102 40-97 (124)
43 2hlr_A Bone morphogenetic prot 93.8 0.028 9.6E-07 36.4 2.0 55 47-101 32-95 (100)
44 1ks6_A Transforming growth fac 66.5 23 0.00079 22.8 7.3 56 47-102 36-102 (107)
45 1m9z_A TGF-beta receptor type 65.1 25 0.00087 22.8 6.3 55 47-101 33-98 (111)
46 2k1a_A Integrin alpha-IIB; sin 62.5 13 0.00045 19.9 3.7 21 104-124 6-26 (42)
47 3kfd_E TGF-beta receptor type- 59.4 33 0.0011 22.4 5.9 56 47-102 44-110 (116)
48 2knc_A Integrin alpha-IIB; tra 58.4 14 0.00049 20.9 3.6 20 105-124 9-28 (54)
49 2l8s_A Integrin alpha-1; trans 58.2 13 0.00045 21.1 3.4 20 105-124 6-25 (54)
50 2knc_B Integrin beta-3; transm 27.3 32 0.0011 20.8 1.8 14 114-127 21-34 (79)
51 1vf5_F Protein PET M; photosyn 20.8 98 0.0034 15.8 2.8 18 109-126 14-31 (35)
52 2k9j_B Integrin beta-3; transm 20.2 59 0.002 17.2 1.8 13 115-127 21-33 (43)
53 2jve_A PROD1; LY-6, three-fing 20.2 72 0.0025 19.0 2.3 16 86-102 75-90 (91)
No 1
>2l03_A LY-6/neurotoxin-like protein 1; LYNX1, acetylcholine receptor, endogenic neuromodulator, Thr toxins, signaling protein; NMR {Homo sapiens}
Probab=98.81 E-value=3.1e-08 Score=61.22 Aligned_cols=72 Identities=22% Similarity=0.434 Sum_probs=48.5
Q ss_pred cceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEE-eCCceEEEEceecCcccCcccccc
Q psy10606 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQK-IYSKRRVVRGCGYINEERDDCYRR 80 (128)
Q Consensus 2 aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~-~~g~~~v~R~C~~~~~~~~~C~~~ 80 (128)
.|+||+|.+ ....|.. .+.|+. ...+|.|.... .....+|.|+|+........
T Consensus 1 ~L~C~~C~~-~~~~c~~--------~~~C~~-------------~~~~C~t~~~~~~~~~~~v~rgC~~~Cp~~~~---- 54 (74)
T 2l03_A 1 MLDCHVCAY-NGDNCFN--------PMRCPA-------------MVAYCMTTRTYYTPTRMKVSKSCVPRCFETVY---- 54 (74)
T ss_dssp CCEEECEEE-SSSCCCC--------EEECCT-------------TCCEEEEEEEEEETTEEEEEEEEESCCCCCCC----
T ss_pred CCEeeECCC-CCCcCCC--------CeEcCC-------------CCCEEEEEEEEccCCCceEeccccCcCcCCcc----
Confidence 489999996 3457754 478985 17889887553 33457889999976554321
Q ss_pred cccCC-ceeEEEeeCCCCCCC
Q psy10606 81 TGTFD-VDSTYCACKGDICNG 100 (128)
Q Consensus 81 ~~~~~-~~~~~C~C~~D~CN~ 100 (128)
.+.+. .....| |++|+||+
T Consensus 55 ~~~~~~~~~v~C-C~tDlCN~ 74 (74)
T 2l03_A 55 DGYSKHASTTSC-CQYDLCNG 74 (74)
T ss_dssp CSSSCCSEEEEE-ECSTTTTC
T ss_pred ccccccceEeEe-CCCCCCCC
Confidence 11111 246788 99999995
No 2
>2j8b_A CD59 glycoprotein; lipid-binding protein, lipid-binding protein MAC, membrane, GPI-anchor, complement, lipoprotein; 1.15A {Homo sapiens} SCOP: g.7.1.3 PDB: 2ux2_A 2uwr_A 1cdq_A 1cdr_A* 1cds_A* 2ofs_A 1erg_A 1erh_A
Probab=98.78 E-value=1.3e-08 Score=64.08 Aligned_cols=74 Identities=27% Similarity=0.449 Sum_probs=49.6
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEEceecCcccCc-cccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINEERD-DCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~-~C~~~~ 81 (128)
|+||+|.... ..|.. +++|+.. ..+|+.+.. ...+.|+|+....-.+ . ....
T Consensus 2 L~Cy~C~~~~-~~C~~--------~~~C~~~-------------~d~C~t~~~----~~~~~k~C~~~~~C~~~~-~~~~ 54 (79)
T 2j8b_A 2 LQCYNCPNPT-ADCKT--------AVNCSSD-------------FDACLITKA----GLQVYNKCWKFEHCNFND-VTTR 54 (79)
T ss_dssp CEEECCSSCC-TTCCC--------EEECCTT-------------CCEEEEEEE----TTEEEEEEECGGGCSHHH-HHHH
T ss_pred cCCcCCCCCC-CCCcc--------ceecCCC-------------CCEeEEEEe----CCeeEecccCccCCCchh-hcch
Confidence 8999999775 67875 4799852 568987766 2367899998543211 1 1111
Q ss_pred ccCCceeEEEeeCCCCCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
.........| |++||||+++.+
T Consensus 55 ~~~~~~~~~C-C~~DLCN~~~~~ 76 (79)
T 2j8b_A 55 LRENELTYYC-CKKDLCNFNEQL 76 (79)
T ss_dssp HTCSSCEEEE-ECSTTCCCGGGC
T ss_pred hccCCcceEE-CCcccCCCCcCc
Confidence 0122356788 999999999765
No 3
>3neq_A Muscarinic M1-toxin1, muscarinic toxin 1; chimeric muscarinic toxin, HM1-muscarinic receptor, snake to green mamba; 1.25A {Dendroaspis angusticeps} PDB: 2vlw_A* 3fev_A 4do8_A
Probab=98.63 E-value=2.5e-07 Score=56.06 Aligned_cols=65 Identities=26% Similarity=0.425 Sum_probs=46.8
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe-CCceEEEEceecCcccCccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI-YSKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~-~g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
|+||.|.+. .|.. .+.|+. .+.+|.|+.... .+..+|.|||+...... .
T Consensus 1 l~C~~~~~~---~~~~--------~~tC~~-------------g~~~C~~~~~~~~~~~~~i~rGCa~~Cp~~------~ 50 (66)
T 3neq_A 1 LTCVKSNSI---WFPT--------SEDCPD-------------GQNLCFKRWQYISPRMYDFTRGCAATCPKP------T 50 (66)
T ss_dssp CEEEEBCSS---SCCE--------EEECCT-------------TCCEEEEEEEEEETTEEEEEEEEESSCCCC------S
T ss_pred CCCccCCCC---CCCc--------ceEcCC-------------CCCEEeEEEEecCCCCCEEeCCCcCcCCCC------C
Confidence 689999976 3432 468885 278899886665 45678999999865532 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
.+.....| |++|+||.
T Consensus 51 --~~~~~v~C-C~TD~CN~ 66 (66)
T 3neq_A 51 --NVRETIRC-CGTDKCNK 66 (66)
T ss_dssp --STTEEEEE-ECSTTTTC
T ss_pred --CCCCEeeE-CCCCCCCC
Confidence 12356788 99999994
No 4
>2h7z_B Irditoxin subunit B; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1
Probab=98.54 E-value=4.6e-07 Score=56.64 Aligned_cols=66 Identities=21% Similarity=0.510 Sum_probs=45.9
Q ss_pred eEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe--CCceEEEEceecCcccCccccccc
Q psy10606 4 VCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI--YSKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 4 ~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~--~g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
+||+|+......|.. .+.|+.. ..+|.|..... .|..+|.|||+...... .
T Consensus 9 ~C~~C~~~~s~~c~~--------~~tCp~g-------------~~~Cyk~~~~~~~~g~~~i~rGCa~tCp~~------~ 61 (77)
T 2h7z_B 9 LCFECNRETCSNCFK--------DNRCPPY-------------HRTCYTLYRPDGNGEMKWAVKGCAKTCPTA------Q 61 (77)
T ss_dssp EECCEETTTCCSCSS--------CEECCTT-------------CCEEEEEEEECSSSCEEEEEEEEESSCCCC------C
T ss_pred ccccCCCCccCCCcc--------CcCcCCC-------------cCEEeEEEEecCCCCceeEeCCcCCcCcCC------C
Confidence 899999876556653 4679851 67898886654 23334899999865432 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
. .....| |++|+||.
T Consensus 62 -~--~~~v~C-C~TD~CN~ 76 (77)
T 2h7z_B 62 -P--GESVQC-CNTPKCND 76 (77)
T ss_dssp -T--TCEEEE-ECSTTTTC
T ss_pred -C--CceeEe-cCCCCCCC
Confidence 1 145788 99999995
No 5
>2h7z_A Irditoxin subunit A; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1
Probab=98.40 E-value=1.3e-06 Score=54.39 Aligned_cols=64 Identities=20% Similarity=0.608 Sum_probs=45.0
Q ss_pred eEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC-CceE-EEEceecCcccCccccccc
Q psy10606 4 VCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY-SKRR-VVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 4 ~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~-g~~~-v~R~C~~~~~~~~~C~~~~ 81 (128)
+||+|+......|.. .+.| . ...|.|...... ...+ |.|||+....... .
T Consensus 9 ~C~~C~~~~s~~~~~--------~~tC-g--------------e~~Cyk~~~~~~~~g~~~i~rGCaatCP~~~-----~ 60 (75)
T 2h7z_A 9 LCFECNRMTSSDCST--------ALRC-Y--------------RGSCYTLYRPDENCELKWAVKGCAETCPTAG-----P 60 (75)
T ss_dssp EEECEETTTCCCTTC--------EEEE-C--------------SSEEEEEEEECTTSCEEEEEEEEESSCCCCC-----T
T ss_pred cccCCCCcccCCCCc--------cCCc-C--------------CCEeEeEEEeCCCCCceeEeCCccCcCcCCC-----C
Confidence 799999887556643 4678 4 788988866542 2344 9999999755321 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
.....| |.+|+||.
T Consensus 61 ----~~~v~C-CsTD~CN~ 74 (75)
T 2h7z_A 61 ----NERVKC-CRSPRCND 74 (75)
T ss_dssp ----TCEEEE-ECSTTCCC
T ss_pred ----CceeEe-cCCCCCCC
Confidence 135778 99999995
No 6
>2pjy_C TGF-beta receptor type-1; ternary complex, three finger toxin, cytokine-cytokine recep complex; 3.00A {Homo sapiens} PDB: 3kfd_I
Probab=98.38 E-value=6.3e-07 Score=56.35 Aligned_cols=54 Identities=26% Similarity=0.407 Sum_probs=41.0
Q ss_pred CCceEEEEEEeCCceEEEEceecCcc----cCc-ccccccccCCceeEEEeeCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINE----ERD-DCYRRTGTFDVDSTYCACKGDICNGS 101 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~----~~~-~C~~~~~~~~~~~~~C~C~~D~CN~a 101 (128)
..+|.+.+...+|...+.|+|....+ ... .|.............| |++|+||..
T Consensus 19 ~g~Cf~sv~~~~g~~~~~~gC~~~~e~~p~~~~~~C~~~~~~~~~~~i~C-C~~D~CN~~ 77 (79)
T 2pjy_C 19 DGLCFVSVTETTDKVIHNSSCIAEIDLIPRDRPFVCAPSSKTGSVTTTYC-CNQDHCNKI 77 (79)
T ss_dssp SSEEEEEEECSSSCCEEEEEEECTTTSSSSSSCGGGCCHHHHTSSEEEEE-ECSTTCCCC
T ss_pred CCEEeEEEEECCCCEEEEECCCChhHcCCCCCCcEeCCCCCCCCceeeEE-CCccccCCC
Confidence 68899988878888889999998754 222 6875544334678889 999999964
No 7
>2jqp_A WEAK toxin 1; protein; NMR {Bungarus candidus}
Probab=98.36 E-value=2.3e-06 Score=51.70 Aligned_cols=64 Identities=27% Similarity=0.550 Sum_probs=43.7
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEE-EEEeCCceEEEEceecCcccCccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKI-IQKIYSKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki-~~~~~g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
|+||.|.|. .|.. .+.|+.. ...|.|. ........+|.|||+....... .
T Consensus 1 l~C~~~~s~---~~~~--------~~tC~~g-------------~~~Cyk~~~~~~~~g~~i~rGCa~tCP~~~-----~ 51 (65)
T 2jqp_A 1 LTCLICPEK---DCQK--------VHTCRNE-------------EKICVKRFYDKNQLGWRAQRGCAVSCPKAK-----P 51 (65)
T ss_dssp CEEEECSSS---SCCE--------EEECCSS-------------CCEEEEEEEEETTTEEEEEEEEESCCCCCC-----S
T ss_pred CCCccCCCC---CCcc--------ceEcCCC-------------cCEEEeeEEEccCCCCEEECCccCcCcCCC-----C
Confidence 689999864 3432 4678851 7889988 4433225789999999755421 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
.....| |++|+||.
T Consensus 52 ----~~~v~C-C~TD~CN~ 65 (65)
T 2jqp_A 52 ----NETVQC-CSTDKCNK 65 (65)
T ss_dssp ----SSEEEE-ECSTTTCC
T ss_pred ----CceeEe-cCCCCCCC
Confidence 145778 99999994
No 8
>1ff4_A Muscarinic toxin/acetylcholine receptor binding P; three fingers motif; 1.50A {Dendroaspis angusticeps} SCOP: g.7.1.1
Probab=98.34 E-value=1.6e-06 Score=52.46 Aligned_cols=64 Identities=23% Similarity=0.434 Sum_probs=43.7
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEE-EEEeCCceEEEEceecCcccCccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKI-IQKIYSKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki-~~~~~g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
|+||.|.|. .|.. .+.|+.. ...|.|. ........+|.|||+....... .
T Consensus 1 l~C~~~~s~---~~~~--------~~tC~~g-------------~~~Cyk~~~~~~~~g~~i~rGCa~tCp~~~-----~ 51 (65)
T 1ff4_A 1 LTCVTTKSI---GGVT--------TEDCPAG-------------QNVCFKRWHYVTPKNYDIIKGCAATCPKVD-----N 51 (65)
T ss_dssp CEEEEECTT---SSEE--------EEECCTT-------------CCEEEEEEEESSSSCEEEEEEEESSCCCCC-----S
T ss_pred CCCccCCCC---CCcc--------CeEcCCC-------------cCEEeeeEEEecCCCCEEECCccCcCcCCC-----C
Confidence 689999964 3432 4678851 7889988 4433224789999999755431 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
.....| |++|+||.
T Consensus 52 ----~~~v~C-C~TD~CN~ 65 (65)
T 1ff4_A 52 ----NDPIRC-CGTDKCND 65 (65)
T ss_dssp ----CCCEEE-ECSTTTTC
T ss_pred ----CceeEe-cCCCCCCC
Confidence 135788 99999994
No 9
>1hc9_A Alpha-bungarotoxin; toxin/peptide, complex (toxin/peptide), acetylcholine receptor mimitope, alpha-bungarotoxin, 3- finger; 1.8A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2qc1_A* 1abt_A 1bxp_A 1haa_A 1haj_A 1hc9_B 1hoy_A 1idg_A 1idh_A 1idi_A 1idl_A 1ik8_A 1ikc_A 1jbd_A 1kc4_A 1kfh_A 1kl8_A 1l4w_A 1ljz_A 1rgj_A ...
Probab=98.34 E-value=2.8e-06 Score=52.64 Aligned_cols=67 Identities=22% Similarity=0.409 Sum_probs=45.6
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC-C---ceEEEEceecCcccCcccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY-S---KRRVVRGCGYINEERDDCY 78 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~-g---~~~v~R~C~~~~~~~~~C~ 78 (128)
|+||.|.+ .|.. .+.|+.. ...|.|...... + ..+|.|||+......
T Consensus 1 l~C~~~~~----~~~~--------~~tCp~g-------------~~~Cyk~~~~~~~~~~~g~~i~rGCa~tCP~~---- 51 (74)
T 1hc9_A 1 IVCHTTAT----SPIS--------AVTCPPG-------------ENLCYRKMWCDVFCSSRGKVVELGCAATCPSK---- 51 (74)
T ss_dssp CEEEETTS----SSCE--------EEECCTT-------------CCEEEEEEECCTTHHHHCCEEEEEEESSCCCC----
T ss_pred CCCccCCC----CCcc--------ceEeCCC-------------cCEEEeEEEECccccccCCEEeCCccCcCcCC----
Confidence 68999986 2321 4678852 788998865432 1 367999999965532
Q ss_pred cccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 79 RRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 79 ~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
. . .....| |++|+||.+...
T Consensus 52 --~-~--~~~i~C-C~TD~CN~~~~~ 71 (74)
T 1hc9_A 52 --K-P--YEEVTC-CSTDKCNPHPKQ 71 (74)
T ss_dssp --C-T--TCEEEE-ECSTTCSCCTTS
T ss_pred --C-C--CceeEe-cCCCCCCCcCCC
Confidence 1 1 145788 999999998743
No 10
>2h5f_A Denmotoxin; three-finger toxin, neurotoxin, snake venom; 1.90A {Boiga dendrophila} SCOP: g.7.1.1
Probab=98.32 E-value=1.2e-06 Score=54.79 Aligned_cols=66 Identities=23% Similarity=0.531 Sum_probs=46.1
Q ss_pred eEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC--CceEEEEceecCcccCccccccc
Q psy10606 4 VCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY--SKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 4 ~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~--g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
+||+|+......|.. .+.|+.. ...|.|...... |..+|.|||+...... .
T Consensus 9 ~C~~C~~~~s~~c~~--------~~tCp~g-------------~~~Cyk~~~~~~~~g~~~i~rGCa~tCp~~------~ 61 (77)
T 2h5f_A 9 FCIQCNRKTWSNCSI--------GHRCLPY-------------HMTCYTLYKPDENGEMKWAVKGCARMCPTA------K 61 (77)
T ss_dssp EEECEESSSSSCTTS--------EEEEEET-------------CCEEEEEEECCSSSCCEEEEEEEESSCCCC------C
T ss_pred ccccCCCCcCCCCcc--------ccEeCCC-------------cCEEeeEEEeCCCCCccEEECCccCcCcCC------C
Confidence 899999876556643 4678841 678988855432 3378999999865532 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
. .....| |++|+||.
T Consensus 62 -~--~~~v~C-C~TD~CN~ 76 (77)
T 2h5f_A 62 -S--GERVKC-CTGASCNS 76 (77)
T ss_dssp -T--TCEEEE-ECSTTTTC
T ss_pred -C--CceeEe-cCCCCCCC
Confidence 1 145788 99999995
No 11
>2l5s_A TGF-beta receptor type-1; ALK5, transforming growth factor beta, type I receptor, SIGN protein; NMR {Homo sapiens}
Probab=98.28 E-value=2.6e-06 Score=54.50 Aligned_cols=55 Identities=25% Similarity=0.350 Sum_probs=41.3
Q ss_pred CCceEEEEEEeCCceEEEEceecCcc----cC-cccccccccCCceeEEEeeCCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINE----ER-DDCYRRTGTFDVDSTYCACKGDICNGSP 102 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~----~~-~~C~~~~~~~~~~~~~C~C~~D~CN~a~ 102 (128)
..+|.+.+...+|...+.|||....+ .. -.|.............| |++|+||...
T Consensus 23 ~g~Cf~sv~~~~g~~~~~~gC~~~~e~~p~~~~~~C~~~~~~~~~~~i~C-C~~D~CN~~~ 82 (88)
T 2l5s_A 23 DGLCFVSVTETTDKVIHNSMCIAEIDLIPRDRPFVCAPSSKTGSVTTTYC-CNQDHCNKIE 82 (88)
T ss_dssp SSEEEEEEEECSSCEEEEEEEECGGGCSSSSSCGGGCSCCCSSTTEEEEE-ECSTTCGGGS
T ss_pred CCEEeEEEEECCCCEEEEECCCChhhcCCCCCceEecCCCCCCCceEeEe-CCccccCCCC
Confidence 67899998888887888899998754 11 16876554434678899 9999999754
No 12
>1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3
Probab=98.23 E-value=8.9e-07 Score=68.58 Aligned_cols=78 Identities=19% Similarity=0.409 Sum_probs=52.2
Q ss_pred cceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC--CceEEEEceecCcccCccccc
Q psy10606 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY--SKRRVVRGCGYINEERDDCYR 79 (128)
Q Consensus 2 aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~--g~~~v~R~C~~~~~~~~~C~~ 79 (128)
+|+||.|.+....+|... ....++|.. .+..|..+....+ +...++|||+.... |..
T Consensus 191 GL~CysC~~~~s~~Cs~e----~~~~v~CtG-------------~En~Clt~~g~~g~~~~~~~~KGCas~S~----C~~ 249 (313)
T 1ywh_A 191 GRQCYSCKGQSTHGCSSE----ETFLIDCRG-------------PMNQCLVATGTHEPKNQSYMVRGCATASM----CQH 249 (313)
T ss_dssp EEEEEEEEEBTTTBSSGG----GCEEEEEET-------------TCCEEEEEEECCSSSSCCEEEEEEECGGG----GTC
T ss_pred CCCCCCcccCCCCCCCCC----CccceecCC-------------CCCcceeeEeeeccCCceEEeccCCCccc----ccC
Confidence 589999998876678631 112478874 2888999988752 34678999997432 332
Q ss_pred c----cccCCceeEEEeeCCCCCCCC
Q psy10606 80 R----TGTFDVDSTYCACKGDICNGS 101 (128)
Q Consensus 80 ~----~~~~~~~~~~C~C~~D~CN~a 101 (128)
. .........+| |++|+||++
T Consensus 250 ~~~~~~~~v~~~~isC-C~g~LCN~~ 274 (313)
T 1ywh_A 250 AHLGDAFSMNHIDVSC-CTKSGCNHP 274 (313)
T ss_dssp HHHHTSSCCSSCEEEE-ESSTTCCSS
T ss_pred CCccceecccceEeEc-CCCCCcCCc
Confidence 1 11111345788 999999998
No 13
>1vyc_A Bucain, neurotoxin; snake neurotoxin; NMR {Bungarus candidus} SCOP: g.7.1.1 PDB: 2h8u_A
Probab=98.20 E-value=2.5e-06 Score=51.57 Aligned_cols=64 Identities=23% Similarity=0.339 Sum_probs=43.0
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC-CceEEEEceecCcccCccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY-SKRRVVRGCGYINEERDDCYRRT 81 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~~~C~~~~ 81 (128)
|+||.|.|. .|.. .+.|+.. ...|.|.....+ ...+|.|||+....... .
T Consensus 1 l~C~~~~s~---~~~~--------~~tC~~g-------------~~~Cyk~~~~~~~~g~~i~rGCa~tCP~~~-----~ 51 (65)
T 1vyc_A 1 RKCLIKYSQ---ANES--------SKTCPSG-------------QLLCLKKWEIGNPSGKEVKRGCVATCPKPW-----K 51 (65)
T ss_dssp CEEEECCTT---SCCE--------EEECCTT-------------CCEEEEEECCSSSSCCCEEEEEESSCCCCC-----S
T ss_pred CCCccCCCC---CCcc--------ceEcCCC-------------cCEEEeeEEEecCCCCEEECCccCcCcCCC-----C
Confidence 689999864 3432 4678851 788988733222 24779999999755421 1
Q ss_pred ccCCceeEEEeeCCCCCCC
Q psy10606 82 GTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 82 ~~~~~~~~~C~C~~D~CN~ 100 (128)
.....| |++|+||.
T Consensus 52 ----~~~i~C-C~TD~CN~ 65 (65)
T 1vyc_A 52 ----NEIIQC-CAKDKCNA 65 (65)
T ss_dssp ----CCCEEE-ESSSSCCC
T ss_pred ----CceeEe-cCCCCCCC
Confidence 135788 99999994
No 14
>1jgk_A Candoxin; beta sheet, snake venom protein, toxin; NMR {Bungarus candidus} SCOP: g.7.1.1
Probab=98.16 E-value=7e-06 Score=49.75 Aligned_cols=66 Identities=24% Similarity=0.380 Sum_probs=42.8
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEEceecCcccCcccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTG 82 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~ 82 (128)
|+||.|.|. .|. ....+.|+.. ...|.|.........+|.|||+...... ..
T Consensus 1 l~C~~~~s~---~~~------~~~~~tC~~g-------------~~~Cyk~~~~~~~g~~i~rGCaatCP~~------~~ 52 (66)
T 1jgk_A 1 MKCKICNFD---TCR------AGELKVCASG-------------EKYCFKESWREARGTRIERGCAATCPKG------SV 52 (66)
T ss_dssp CEEEECCTT---SCS------CCEEEECCSS-------------SCEEEEEEECCSSCCEEECCEESCCCCC------SS
T ss_pred CCCccCCCC---CCc------CCCeeECCCC-------------cCEEeeeEEeCCCCCEEECCccCcCcCC------CC
Confidence 689999865 232 0124678851 7889887554322478999999975532 11
Q ss_pred cCCceeEEEeeCCCCCC
Q psy10606 83 TFDVDSTYCACKGDICN 99 (128)
Q Consensus 83 ~~~~~~~~C~C~~D~CN 99 (128)
. .....| |++|+||
T Consensus 53 ~--~~~v~C-C~TD~CN 66 (66)
T 1jgk_A 53 Y--GLYVLC-CTTDDCN 66 (66)
T ss_dssp S--CCEEEE-ECSTTCC
T ss_pred C--CCEeEe-cCCCCCC
Confidence 0 135778 9999999
No 15
>1ntn_A Neurotoxin I; postsynaptic neurotoxin; 1.90A {Naja oxiana} SCOP: g.7.1.1 PDB: 1w6b_A
Probab=98.16 E-value=7.9e-06 Score=50.33 Aligned_cols=48 Identities=19% Similarity=0.339 Sum_probs=33.4
Q ss_pred CCceEEEEEEeC-C---ceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 47 PVICRKIIQKIY-S---KRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 47 ~~~C~Ki~~~~~-g---~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
...|.|...... + ..+|.|||+...... . . .....| |++|+||.+...
T Consensus 18 ~~~Cyk~~~~~~~~~~~g~~i~rGCaatCP~~------~-~--~~~v~C-C~TD~CN~~~~~ 69 (72)
T 1ntn_A 18 QNLCYTKTWCDAWCGSRGKVIELGCAATCPTV------E-S--YQDIKC-CSTDNCNPHPKQ 69 (72)
T ss_dssp CCEEEEEEECCTTHHHHCCEEEEEEESSCCCC------C-T--TEEEEE-ECSTTCCCCTTC
T ss_pred cCeEEeEEEecccccccCCeEeCCccCcCcCC------C-C--CceeEe-cCCCCCCCCCCc
Confidence 788998865432 1 367999999965532 1 1 145788 999999988743
No 16
>1kba_A Kappa-bungarotoxin; 2.30A {Bungarus multicinctus} SCOP: g.7.1.1 PDB: 2nbt_A
Probab=98.10 E-value=5.7e-06 Score=50.12 Aligned_cols=61 Identities=25% Similarity=0.353 Sum_probs=41.2
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC----CceEEEEceecCccc-Cccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY----SKRRVVRGCGYINEE-RDDC 77 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~----g~~~v~R~C~~~~~~-~~~C 77 (128)
|+||.|.+. ..+.|+.. ...|.|...... ...+|.|||+..... .
T Consensus 1 l~C~~~~~~--------------~~~tC~~g-------------~~~Cyk~~~~~~~~~~~g~~i~rGCa~tCP~~~--- 50 (66)
T 1kba_A 1 RTCLISPSS--------------TPQTCPNG-------------QDICFLKAQCDKFCSIRGPVIEQGCVATCPQFR--- 50 (66)
T ss_dssp CEEEETTTT--------------EEEECCTT-------------CCEEEEEEECCTTHHHHCCEEEEEEESSCCCCC---
T ss_pred CCCccCCCC--------------CccCCCCC-------------cCeEEEEEEeCccccccCCEEeCCccCcCcCCC---
Confidence 679988861 14568741 788998865433 136889999986443 2
Q ss_pred ccccccCCceeEEEeeCCCCCCC
Q psy10606 78 YRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 78 ~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
. . .....| |++|+||.
T Consensus 51 ---~-~--~~~i~C-C~TD~CN~ 66 (66)
T 1kba_A 51 ---S-N--YRSLLC-CTTDNCNH 66 (66)
T ss_dssp ---T-T--EEEEEE-ESSTTCCC
T ss_pred ---C-C--CceeEe-cCCCCCCC
Confidence 1 1 245788 99999994
No 17
>1cvo_A Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.7.1.1 PDB: 1kxi_A
Probab=98.05 E-value=1e-05 Score=48.32 Aligned_cols=43 Identities=30% Similarity=0.522 Sum_probs=30.3
Q ss_pred CCceEEEEEEeC-CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIY-SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|...... ...+|.|||+...... . . .....| |++|+||
T Consensus 19 ~~~Cyk~~~~~~~~g~~i~rGCa~tCp~~------~-~--~~~i~C-C~TD~CN 62 (62)
T 1cvo_A 19 KNLCFKATLKKFPLKFPVKRGCADNCPKN------S-A--LLKYVC-CSTDKCN 62 (62)
T ss_dssp CCEEEEEEETTSSSCCCEEEEEESSCCCC------C-T--TEEEEE-ESSTTCC
T ss_pred cCEEeeeEEeCCCCCcEEeCCccCcCcCC------C-C--CcEeEe-cCCCCCC
Confidence 788988855322 3468999999975532 1 1 145788 9999999
No 18
>1mr6_A Neurotoxin; venom; NMR {Bungarus multicinctus} SCOP: g.7.1.1
Probab=98.03 E-value=3.3e-06 Score=51.30 Aligned_cols=64 Identities=25% Similarity=0.492 Sum_probs=41.8
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC-C---ceEEEEceecCcccCcccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY-S---KRRVVRGCGYINEERDDCY 78 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~-g---~~~v~R~C~~~~~~~~~C~ 78 (128)
|+||.|.|. .|.. .+.|+.. ...|.|...... | ..+|.|||+......
T Consensus 1 l~C~~~~~~---~~~~--------~~tCp~g-------------~~~C~~~~~~~~~g~~~~~~i~rGCa~tCp~~---- 52 (68)
T 1mr6_A 1 MQCKTCSFY---TCPN--------SETCPDG-------------KNICVKRSWTAVRGDGPKREIRRECAATCPPS---- 52 (68)
T ss_dssp CBCCCCSSS---CCCS--------CCBCCTT-------------CCCEEEECCBCCSSSCCSBCCEEEECSSSSSC----
T ss_pred CCCcCCCCC---CCcc--------ccEeCCC-------------CCEEEEEEEecccCccccceEeCCccCcCcCC----
Confidence 689999864 3432 4678851 678988754332 3 267899998865432
Q ss_pred cccccCCceeEEEeeCCCCCCC
Q psy10606 79 RRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 79 ~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
. . .....| |++|+||.
T Consensus 53 --~-~--~~~v~C-C~TD~CN~ 68 (68)
T 1mr6_A 53 --K-L--GLTVFC-CTTDNCNH 68 (68)
T ss_dssp --C-S--SSCCCC-BSSSSCCC
T ss_pred --C-C--CceeEe-cCCCCCCC
Confidence 1 1 134678 99999994
No 19
>3era_A Erabutoxin A; snake neurotoxin, venom, postsynaptic neurotoxin; 1.70A {Laticauda semifasciata} SCOP: g.7.1.1 PDB: 2era_A
Probab=97.87 E-value=0.00011 Score=43.86 Aligned_cols=61 Identities=21% Similarity=0.469 Sum_probs=39.2
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEEceecCcccCcccccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTG 82 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~ 82 (128)
|.||.+.|. .+.. .+.|+.. ...|.|.........+|.|||+ ... ..
T Consensus 1 l~C~~~~~~---~~~~--------t~tC~~g-------------~~~Cyk~~~~~~~g~~i~rGC~--CP~------~~- 47 (62)
T 3era_A 1 RICFNHQTS---QPQT--------TKTCSPG-------------ESSCYNKQWSDFRGTIIERGCG--CPT------VK- 47 (62)
T ss_dssp CEEECCCTT---SCCC--------EEECCTT-------------CCCEEEEEEEETTEEEEEEEES--CCC------CC-
T ss_pred CCccCCCCC---CCCC--------ceECCCC-------------cCeeeeeEEeCCCCCEEeeeCC--CCC------CC-
Confidence 578888865 2221 4678741 6789888554444458999995 322 11
Q ss_pred cCCceeEEEeeCCCCCC
Q psy10606 83 TFDVDSTYCACKGDICN 99 (128)
Q Consensus 83 ~~~~~~~~C~C~~D~CN 99 (128)
. .....| |.+|.||
T Consensus 48 ~--~~~v~C-C~TD~CN 61 (62)
T 3era_A 48 P--GIKLSC-CESEVCN 61 (62)
T ss_dssp T--TCEEEE-ECSTTCC
T ss_pred C--CceEEE-cCCCCCC
Confidence 1 235778 9999999
No 20
>3hh7_A Muscarinic toxin-like protein 3 homolog; haditoxin, three finger toxin, snake venom, neurotoxin, nicotinic acetylcholine receptors; 1.55A {Ophiophagus hannah} SCOP: g.7.1.0
Probab=97.83 E-value=0.00016 Score=43.57 Aligned_cols=44 Identities=32% Similarity=0.552 Sum_probs=31.6
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|.........+|.|||+...... . .......| |++|+||
T Consensus 21 ~~~Cyk~~~~~~~g~~i~rGCaatCp~~------~--~~~~~v~C-CsTD~CN 64 (65)
T 3hh7_A 21 GYFCYKSSWIDGREGRIERGCTFTCPEL------T--PNGKYVYC-CRRDKCN 64 (65)
T ss_dssp TCEEEEEEEEETTEEEEEEEEESSCCCC------C--TTEEEEEE-ECSTTTT
T ss_pred CCeEeEEEEecCCCCEEeCcccCcCcCC------C--CCCCEeEE-CCCCCCC
Confidence 7789988666554578899999865432 1 11346788 9999999
No 21
>3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus}
Probab=97.82 E-value=5.6e-05 Score=57.64 Aligned_cols=84 Identities=23% Similarity=0.442 Sum_probs=50.2
Q ss_pred CcceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEE--e-CCc--eEEEEceecCcccCc
Q psy10606 1 VSIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQK--I-YSK--RRVVRGCGYINEERD 75 (128)
Q Consensus 1 ~aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~--~-~g~--~~v~R~C~~~~~~~~ 75 (128)
.+|+||+|.+ .+.+|... ....++|+.. ..+|..++.. . ++. ..++|+|.....-..
T Consensus 92 ~sL~CysC~~-~~~sC~~G----~~~~~tC~~~-------------~d~C~~~vt~~t~~g~~~~~~~~K~C~~~s~C~g 153 (277)
T 3laq_U 92 RYLECASCTS-LDQSCERG----REQSLQCRYP-------------TEHCIEVVTLQSTERSLKDEDYTRGCGSLPGCPG 153 (277)
T ss_dssp -CCEEECEET-TTTCSSSS----CCCEEECSST-------------TCCEEEEEEEECTTCSCCCCSEEEEEEECSSCSE
T ss_pred cceEeEeCCC-CCCCccCC----CcceeECCCC-------------CCeeeEEEEEEeecCCcccceEEecCCCCCCCCC
Confidence 3699999998 57899521 0126899851 6789877664 2 332 466799975322111
Q ss_pred ccccccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 76 DCYRRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 76 ~C~~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
. ......+......| |++|+||.+..+
T Consensus 154 s-~~~~~~~~~~~~~C-C~tDlCN~~~~~ 180 (277)
T 3laq_U 154 T-AGFHSNQTFHFLKC-CNYTHCNGGPVL 180 (277)
T ss_dssp E-EEEECSSEEEEEEE-ESSTTTTCSSCC
T ss_pred c-eecccceEEEEEee-cCCcccCCCCCC
Confidence 1 11111111225678 999999988753
No 22
>3laq_U UPAR, U-PAR, urokinase plasminogen activator surface receptor; ATF, supar, smupar, MATF, disulfide bond, EGF-LIK hydrolase, kringle; HET: NAG; 3.20A {Mus musculus}
Probab=97.82 E-value=2e-05 Score=60.16 Aligned_cols=80 Identities=24% Similarity=0.421 Sum_probs=52.8
Q ss_pred cceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEe--CCceEEEEceecCcccCccccc
Q psy10606 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKI--YSKRRVVRGCGYINEERDDCYR 79 (128)
Q Consensus 2 aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~--~g~~~v~R~C~~~~~~~~~C~~ 79 (128)
.|+||.|.+....+|... ..+.++|... ++.|....... ++...++|||+.... |..
T Consensus 189 Gl~C~sC~~~~~~~C~~~----~~~~~~C~G~-------------et~C~~~~g~~~~g~~~~~~kGCat~S~----C~~ 247 (277)
T 3laq_U 189 GFQCYSCEGNNTLGCSSE----EASLINCRGP-------------MNQCLVATGLDVLGNRSYTVRGCATASW----CQG 247 (277)
T ss_dssp SCEEEEBCSSSSSSSSSS----SCEEEECCTT-------------CCEEEEECCC-----CCCCEEEEECSSS----SSS
T ss_pred ccCCCCcccCCCCCCCCC----CCcceEcCCC-------------CCcceEEEeEEecCceeEEecCCCCccc----cCC
Confidence 589999999877889742 1124789852 78898875443 234567899997533 332
Q ss_pred c-----cccCCceeEEEeeCCCCCCCCCC
Q psy10606 80 R-----TGTFDVDSTYCACKGDICNGSPS 103 (128)
Q Consensus 80 ~-----~~~~~~~~~~C~C~~D~CN~a~~ 103 (128)
. ....+....+| |.+|+||+|..
T Consensus 248 ~~~~~~~~~~~~~~~sC-C~g~lCN~~~~ 275 (277)
T 3laq_U 248 SHVADSFPTHLNVSVSC-CHGSGCNSPTG 275 (277)
T ss_dssp SHHHHTSSCCSSCCEEE-ESSSGGGSCC-
T ss_pred CCcccceeeccceeeEe-cCCCCcCCCCC
Confidence 1 11223567889 99999999864
No 23
>1lsi_A LSIII; venom, multigene family, neurotoxin; NMR {Laticauda semifasciata} SCOP: g.7.1.1
Probab=97.78 E-value=3e-05 Score=46.85 Aligned_cols=44 Identities=23% Similarity=0.311 Sum_probs=30.3
Q ss_pred CCceEEEEEEeC----CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIY----SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~----g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|...... ...+|.|||+...... . . .....| |++|+||.
T Consensus 17 ~~~Cyk~~~~~~~~~~rg~~i~rGCa~tCP~~------~-~--~~~i~C-C~TD~CN~ 64 (66)
T 1lsi_A 17 QEICYVKSWCNAWCSSRGKVLEFGCAATCPSV------N-T--GTEIKC-CSADKCNT 64 (66)
T ss_dssp CCEEEEEECCCTTCTTSCCCCEEEEESSCCCC------C-S--SCEEEE-ESSTTTTS
T ss_pred cCEEEEEEEECccccccCcEEeCCccCcCcCC------C-C--CceeEe-cCCccCCC
Confidence 788988855432 1467899999865532 1 1 135778 99999995
No 24
>1vb0_A Cobrotoxin B; short-chain neurotoxin, three-finger toxin; HET: SO4; 0.92A {Naja atra} SCOP: g.7.1.1 PDB: 1onj_A* 1je9_A 1nor_A 1iq9_A 1nea_A 3nds_A 1cod_A 1coe_A 1v6p_A 1g6m_A 1qkd_A 1qke_A 5ebx_A 1era_A 1fra_A 3ebx_A 6ebx_A 1nxb_A
Probab=97.76 E-value=0.00021 Score=42.47 Aligned_cols=42 Identities=26% Similarity=0.421 Sum_probs=27.9
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|......-..+|.|||+ .... . . .....| |.+|.||.
T Consensus 20 ~~~Cyk~~~~~~~g~~i~rGCa--CP~~------~-~--~~~v~C-CsTD~CN~ 61 (61)
T 1vb0_A 20 ETNCYKKWWSDHRGTIIERGCG--CPKV------K-P--GVNLNC-CTTDRCNN 61 (61)
T ss_dssp CSCEEEEEEEETTEEEEEEEES--CCCC------C-T--TCEEEE-ECSTTTTC
T ss_pred cCeeEeeEEcCCCCCEEeeeCc--CCCC------C-C--CceEEe-cCCCCCCC
Confidence 4569887554332478999999 4432 1 1 135678 99999994
No 25
>3evs_C Bone morphogenetic protein receptor type-1B; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Mus musculus}
Probab=97.75 E-value=5.4e-05 Score=50.90 Aligned_cols=58 Identities=19% Similarity=0.285 Sum_probs=40.1
Q ss_pred CCceEEEEEE-eCCceEEEEceecCcccCcccccccccCCceeEEEee-CCCCCCCCCCCC
Q psy10606 47 PVICRKIIQK-IYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCAC-KGDICNGSPSLG 105 (128)
Q Consensus 47 ~~~C~Ki~~~-~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C-~~D~CN~a~~~~ 105 (128)
..+|.+.+.. .+|+..+.|||.........|.........+...| | ++|+||....+.
T Consensus 43 ~g~Cf~sv~~~~~G~~~~~~GCl~~~~~~~~C~~~~~~~~~~~i~C-C~~~DfCN~~l~p~ 102 (119)
T 3evs_C 43 DGYCFTMIEEDDSGMPVVTSGCLGLEGSDFQCRDTPIPHQRRSIEC-CTERNECNKDLHPT 102 (119)
T ss_dssp SSEEEEEEEECTTCSEEEEEEEECSTTHHHHSSCCCCTTCCEEEEE-ECSSTTGGGGCCCC
T ss_pred CCEEEEEEEEcCCCcEEEEEcCCcccCCccccccCCcccCcceeec-cCCcCccCCCCccc
Confidence 6789998876 46888888999986422226765433333467799 9 899999754443
No 26
>3plc_A Beta-cardiotoxin OH-27; beta-sheet, novel cardiotoxin; 2.41A {Ophiophagus hannah} SCOP: g.7.1.1
Probab=97.74 E-value=3.6e-05 Score=46.05 Aligned_cols=44 Identities=32% Similarity=0.529 Sum_probs=27.1
Q ss_pred CCceEEEEEEeC-CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIY-SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|...... |..+|.|||+...... . . .....| |++|+||.
T Consensus 19 ~~~Cyk~~~~~~~~~~~i~rGCa~tCp~~------~-~--~~~v~C-C~TD~CN~ 63 (63)
T 3plc_A 19 QDKCVKMTIKKLPSKYDVIRGCIDICPKS------S-A--DVEVLC-CDTNKCNK 63 (63)
T ss_dssp CCEEEEEC--------CCEEEEESSCCCC------C-S--SCCEEE-ECSTTCC-
T ss_pred cCeEeEEEEecCCCCEEEeCCccCcCCCC------C-C--CceeEE-cCCCCCCC
Confidence 788988865543 3456899999865532 1 1 245788 99999993
No 27
>1ntx_A Alpha-neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1
Probab=97.72 E-value=0.00021 Score=42.35 Aligned_cols=42 Identities=26% Similarity=0.426 Sum_probs=28.4
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|......-..+|.|||+ .... . . .....| |.+|.||.
T Consensus 19 ~~~Cyk~~~~~~~g~~i~rGCa--CP~~------~-~--~~~v~C-CsTD~CN~ 60 (60)
T 1ntx_A 19 ENSCYKKYWRDHRGTIIERGCG--CPKV------K-P--GVGIHC-CQSDKCNY 60 (60)
T ss_dssp CSCEEEEEEECSSSEEEEEEES--CCCC------C-T--TSEEEE-ESSTTCCC
T ss_pred CcEeEeeEEcCCCCCEEeeECc--CCCC------C-C--CcEEEe-cCCCCCCC
Confidence 6779887554332478999999 4432 1 1 135678 99999994
No 28
>2h62_C Bone morphogenetic protein receptor type IA; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.7.1.3 PDB: 2h64_B 3nh7_A 1rew_C 3qb4_B 2goo_B* 2qj9_D 2qja_C 2qjb_C 2k3g_A 1es7_B
Probab=97.72 E-value=4.2e-05 Score=52.14 Aligned_cols=56 Identities=20% Similarity=0.324 Sum_probs=40.2
Q ss_pred CCceEEEEEEeC-CceEEEEceecCcccC-cccccccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 47 PVICRKIIQKIY-SKRRVVRGCGYINEER-DDCYRRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 47 ~~~C~Ki~~~~~-g~~~v~R~C~~~~~~~-~~C~~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
...|.+.+...+ |+..+.|||.. .+.. ..|.............| |.+|+||.....
T Consensus 56 ~g~Cf~sv~~~~~G~~~~~~GCl~-~e~~~~~C~~~~~~~~~~~i~C-C~~D~CN~~l~p 113 (129)
T 2h62_C 56 NGHCFAIIEEDDQGETTLASGCMK-YEGSDFQCKDSPKAQLRRTIEC-CRTNLCNQYLQP 113 (129)
T ss_dssp SSEEEEEEEECSSSCEEEEEEEEC-STTHHHHHHCCTTCSSCEEEEE-ECSTTGGGGCCC
T ss_pred CCeEeEEEEEcCCCCEEEEeCCcC-ccCCcccccCCCCCCCcceeEe-cCccccCCCCCC
Confidence 677999888655 78888999998 3322 26765544334578899 999999985543
No 29
>4aea_A Long neurotoxin 1; three-finger toxin, nicotinic acetylcholine receptor; 1.94A {Naja kaouthia} SCOP: g.7.1.1 PDB: 1lxg_A 1lxh_A 1yi5_F 1ctx_A 2ctx_A 1txa_A 1txb_A
Probab=97.68 E-value=0.00016 Score=44.38 Aligned_cols=47 Identities=23% Similarity=0.330 Sum_probs=32.0
Q ss_pred CceEEEEEEeC----CceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCCCCCC
Q psy10606 48 VICRKIIQKIY----SKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNGSPSL 104 (128)
Q Consensus 48 ~~C~Ki~~~~~----g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~~ 104 (128)
..|.|...... ...+|.|||+...... . ......| |++|+||.-...
T Consensus 18 ~~Cyk~~~~~~~~~~~g~~i~rGCaatCP~~------~---~~~~v~C-CsTD~CN~~~~~ 68 (71)
T 4aea_A 18 HVCYTKTWCDAFCSIRGKRVDLGCAATCPTV------K---TGVDIQC-CSTDNCNPFPTR 68 (71)
T ss_dssp CEEEEEEECCTTHHHHCCEEEEEEESSCCCC------C---TTEEEEE-ECSTTCCCCCCC
T ss_pred CeEeEEEEecccccCCCcEEeCcccCcCcCC------C---CCceeEe-cCCCCCCCCccc
Confidence 67988755432 2357899999875532 1 1246788 999999987643
No 30
>1f94_A Bucandin; three-finger snake presynaptic neurotoxin; 0.97A {Bungarus candidus} SCOP: g.7.1.1 PDB: 1ijc_A
Probab=97.62 E-value=2e-05 Score=47.26 Aligned_cols=61 Identities=28% Similarity=0.609 Sum_probs=40.9
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeCCceEEEE--ceecCcccCcccccc
Q psy10606 3 IVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIYSKRRVVR--GCGYINEERDDCYRR 80 (128)
Q Consensus 3 L~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~g~~~v~R--~C~~~~~~~~~C~~~ 80 (128)
|+||.|.|. .|.. .+.|+.. ...|.|.... .+|.| ||+......
T Consensus 1 l~C~~~~~~---~~~~--------~~tC~~g-------------~~~Cyk~~~~----~~i~r~~GCaatCp~~------ 46 (63)
T 1f94_A 1 MECYRCGVS---GCHL--------KITCSAE-------------ETFCYKWLNK----ISNERWLGCAKTCTEI------ 46 (63)
T ss_dssp CEEEEEETT---EEEE--------EEECCTT-------------CCEEEEEEET----TTCCEEEEEESCCCCE------
T ss_pred CCCccCCCC---CCcc--------ccCcCCC-------------cCEEeeeEEE----eEEEEcCCccCcCcCC------
Confidence 689999864 3322 4578751 7889888543 66889 999864432
Q ss_pred cccCCceeEEEeeCCCCCCC
Q psy10606 81 TGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 81 ~~~~~~~~~~C~C~~D~CN~ 100 (128)
... .....| |++|+||.
T Consensus 47 ~~~--~~~v~C-C~TD~CN~ 63 (63)
T 1f94_A 47 DTW--NVYNKC-CTTNLCNT 63 (63)
T ss_dssp ESS--SEEEEE-ECSTTCCC
T ss_pred CCC--CceeEe-cCCCCCCC
Confidence 110 245778 99999994
No 31
>3vts_A Cytotoxin 1; three finger toxin, venom toxin; 2.43A {Hemachatus haemachatus}
Probab=97.56 E-value=0.00015 Score=43.20 Aligned_cols=43 Identities=28% Similarity=0.550 Sum_probs=29.9
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|.........+|.|||+...... . .+.+ ..| |++|.||
T Consensus 19 qnlCykk~~~~~~g~~i~rGCaatCP~~------~--~~~~-v~C-C~tDkCN 61 (61)
T 3vts_A 19 KNLCYKMTLMKMPKIPIKRGCTDACPKS------S--LLVK-VVC-CNKDKCN 61 (61)
T ss_dssp CCEEEEEEETTEEEEEEEEEEESSCCCC------C--SSEE-EEE-ECSTTCC
T ss_pred CceEEeEEEecCCCCeEEeceeCcCcCC------C--CCcE-EEE-eCCccCC
Confidence 6789987654333578999999975532 1 2233 568 9999999
No 32
>2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U*
Probab=97.36 E-value=0.00043 Score=52.70 Aligned_cols=80 Identities=21% Similarity=0.453 Sum_probs=45.2
Q ss_pred CcceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEE---E--eCCc---eEEEEceecCcc
Q psy10606 1 VSIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQ---K--IYSK---RRVVRGCGYINE 72 (128)
Q Consensus 1 ~aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~---~--~~g~---~~v~R~C~~~~~ 72 (128)
.+|.||+|.+....-|.. ....+.|+.. ..+|..++. . ++|. +.+.|+|+....
T Consensus 92 ~sLsC~sC~~~~~scc~g-----~~~s~tCp~~-------------~d~Cvt~~~~~s~a~~~g~~~~~~~~KgC~~ss~ 153 (276)
T 2fd6_U 92 RYLECISCGSSDMSCERG-----RHQSLQCRSP-------------EEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPG 153 (276)
T ss_dssp -CCEEEEEETTTTTTTTT-----CCEEEECSST-------------TCEEEEEEEEC----------CCSEEEEEEECTT
T ss_pred CCcCCccCCCCCCccccC-----CCcccCCCCC-------------CCEEEEEEEeeeeecccCccceeeEecCCCCcCC
Confidence 369999999886433332 1136899851 568988866 2 2342 246899964322
Q ss_pred cCcccc--cccc-cCCceeEEEeeCCCCCCCCCC
Q psy10606 73 ERDDCY--RRTG-TFDVDSTYCACKGDICNGSPS 103 (128)
Q Consensus 73 ~~~~C~--~~~~-~~~~~~~~C~C~~D~CN~a~~ 103 (128)
|. .... ........| |++|+||.+..
T Consensus 154 ----C~gsv~~~~~~~~~~~~C-C~tD~CN~~p~ 182 (276)
T 2fd6_U 154 ----CPGSNGFHNNDTFHFLKC-CNTTKCNEGPI 182 (276)
T ss_dssp ----CSEEEEEEETTEEEEEEE-ECSTTTTCSSC
T ss_pred ----CCCeEEeCCceEEEeeEc-cCCCccCCCCC
Confidence 30 0111 111235688 99999996654
No 33
>1ug4_A Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {Naja atra} PDB: 1h0j_A* 1i02_A 1xt3_A* 2bhi_A* 2crs_A 2crt_A 1cxn_A 1cxo_A 1tgx_A 1cb9_A 1ccq_A 1ffj_A 1chv_S 2ccx_A 1cre_A 1crf_A 1kbs_A 1kbt_A 1rl5_A 1zad_A ...
Probab=97.32 E-value=0.00044 Score=40.89 Aligned_cols=43 Identities=28% Similarity=0.519 Sum_probs=29.7
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICN 99 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN 99 (128)
...|.|.........+|.|||+...... . . .....| |.+|+||
T Consensus 18 ~~~Cyk~~~~~~~g~~i~rGCa~tCP~~------~-~--~~~v~C-C~TD~CN 60 (60)
T 1ug4_A 18 KNLCYKMFMVAAPKVPVKRGCIDVCPKS------S-L--LVKYVC-CNTDRCN 60 (60)
T ss_dssp CCEEEEEEETTEEEEEEEEEEESSCCCC------C-S--SEEEEE-ECSTTCC
T ss_pred cCeEeeeEEecCCCCEEECCccCcCcCC------C-C--CceeEe-cCCCCCC
Confidence 7889888543222467999999975532 1 1 145778 9999999
No 34
>1tfs_A Toxin FS2; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1
Probab=97.21 E-value=0.00079 Score=39.82 Aligned_cols=42 Identities=33% Similarity=0.568 Sum_probs=26.6
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|......-..+|.||| . |.... . .....| |.+|.||.
T Consensus 19 ~~~Cyk~~~~~~~g~~i~rGC--t------CP~~~-~--~~~v~C-CsTD~CN~ 60 (60)
T 1tfs_A 19 ENTCYKMFIRTHREYISERGC--G------CPTAM-W--PYQTEC-CKGDRCNK 60 (60)
T ss_dssp CSEEEEEEETTEEEEEEEEEE--S------SCCCC-T--TEEEEE-EESTTCCC
T ss_pred CcEeeeeEEcCCCCCEEeeec--c------CCCCC-C--CceEEe-cCCCCCCC
Confidence 677988743211137899999 3 32111 1 245778 99999994
No 35
>1fas_A Fasciculin 1; toxin; 1.80A {Dendroaspis angusticeps} SCOP: g.7.1.1 PDB: 1fsc_A 1f8u_B* 1b41_B 1fss_B* 1ku6_B* 1mah_F* 2x8b_B* 1qm7_A
Probab=97.12 E-value=0.0026 Score=37.72 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=27.1
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCC-CCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKG-DICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~-D~CN~ 100 (128)
...|.|......-..+|.||| . |.... . .....| |.+ |.||.
T Consensus 19 ~~~Cyk~~~~~~~g~~i~RGC--t------CP~~~-~--~~~v~C-CsT~D~CN~ 61 (61)
T 1fas_A 19 ENSCYRKSRRHPPKMVLGRGC--G------CPPGD-D--YLEVKC-CTSPDKCNY 61 (61)
T ss_dssp TSCEEEEEESSSSCCEEEEEE--S------CCCCC-S--SEEEEE-ECSSTTTTC
T ss_pred CcCCeeeEEcCCCCCEEeeeC--C------CCCCC-C--CcEEEe-eCCcCCCCc
Confidence 677988754332247899999 2 32211 1 245778 999 99994
No 36
>1ywh_A Urokinase plasminogen activator surface receptor; UPAR, three-finger fold, protein-peptide complex, hydrolase; HET: ALC NAG FUC NDG BMA MAN; 2.70A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3
Probab=97.00 E-value=0.0013 Score=50.89 Aligned_cols=82 Identities=21% Similarity=0.444 Sum_probs=46.2
Q ss_pred CcceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEE--e---CC-c--eEEEEceecCcc
Q psy10606 1 VSIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQK--I---YS-K--RRVVRGCGYINE 72 (128)
Q Consensus 1 ~aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~--~---~g-~--~~v~R~C~~~~~ 72 (128)
.+|.||+|.+..+ .|... ....+.|+.. ..+|..++.. . +| . ..+.|+|.....
T Consensus 91 ~sLsCysC~~~~~-sC~~g----~~~s~tCp~~-------------~d~Cvt~~~~~s~~~~~g~~~~~~~~KgC~~s~~ 152 (313)
T 1ywh_A 91 RYLECISCGSSDM-SCERG----RHQSLQCRSP-------------EEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPG 152 (313)
T ss_dssp CCSEEECBCSSSS-CHHHH----TTCEEECSST-------------TCEEEEEEEEECC-----CCSCCEEEEEEEECTT
T ss_pred cccCCccCCCCCC-CcccC----CCcccCCCCC-------------CCEEEEEEEeeeeeccCCccccceEecCCCCcCC
Confidence 4799999998853 45220 0126889851 5689888652 2 33 2 267899955322
Q ss_pred -cCcccccccccCCceeEEEeeCCCCCCCCCC
Q psy10606 73 -ERDDCYRRTGTFDVDSTYCACKGDICNGSPS 103 (128)
Q Consensus 73 -~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~ 103 (128)
+.. .............| |++|+||.+..
T Consensus 153 C~gs--v~~~~~~~~~~~~C-C~TD~CN~~p~ 181 (313)
T 1ywh_A 153 CPGS--NGFHNNDTFHFLKC-CNTTKCNEGPI 181 (313)
T ss_dssp CSEE--EEEECSSEEEEEEE-ECSTTTTCSSC
T ss_pred CCCe--EEeCCceEEEeeee-eCCCCcCCCCC
Confidence 110 00111112345688 99999996544
No 37
>2fd6_U Urokinase plasminogen activator surface receptor; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.7.1.3 g.7.1.3 g.7.1.3 PDB: 3bt2_U* 3bt1_U* 2i9b_E* 3u74_U* 3u73_U*
Probab=96.72 E-value=0.004 Score=47.32 Aligned_cols=78 Identities=19% Similarity=0.374 Sum_probs=51.4
Q ss_pred cceEEecCCCCCCCCCCCCCCCCCCccCCCCCCCCCcccccCCCCCCceEEEEEEeC--CceEEEEceecCcccCccccc
Q psy10606 2 SIVCYQCNSAYDPRCGDPFDPYSLGTVNCSLLPIPENLLHKEYQTPVICRKIIQKIY--SKRRVVRGCGYINEERDDCYR 79 (128)
Q Consensus 2 aL~CY~C~S~~~~~C~~~f~~~~~~~~~C~~~~~~~~l~~~~~~~~~~C~Ki~~~~~--g~~~v~R~C~~~~~~~~~C~~ 79 (128)
.++||.|-+....+|..+ ..+.++|.. .+..|+.+...++ +...++|||+.... |..
T Consensus 192 G~~CpaC~~~~s~~Cs~~----~t~~v~CtG-------------~En~Cv~~~g~~g~~~~s~~vkGCaT~s~----C~~ 250 (276)
T 2fd6_U 192 GRQCYSCKGNSTHGCSSE----ETFLIDCRG-------------PMNQCLVATGTHEPKNQSYMVRGCATASM----CQH 250 (276)
T ss_dssp EEEEEEEEEBTTTBSSTT----TCEEEEEET-------------TCCEEEEEEEEETTTTEEEEEEEEECGGG----CC-
T ss_pred CCCCcccccCCCCCCCCC----Ccccceeec-------------CcccceeeeeeeccCCceEEEecCCCchh----hcC
Confidence 478999998877778643 112367885 2788999988764 24567899997432 332
Q ss_pred c---cccCC-ceeEEEeeCCCCCCCC
Q psy10606 80 R---TGTFD-VDSTYCACKGDICNGS 101 (128)
Q Consensus 80 ~---~~~~~-~~~~~C~C~~D~CN~a 101 (128)
. ..... ....+| |++.+||+|
T Consensus 251 ~~~~~~~~~~~~~~sC-c~G~~CN~~ 275 (276)
T 2fd6_U 251 AHLGDAFSMNHIDVSC-CTKSGCNHP 275 (276)
T ss_dssp --CGGGGTCSSCEEEE-ECSTTTTSC
T ss_pred CCcccccccccceeEe-CCCCCCCCC
Confidence 1 00111 445788 999999987
No 38
>4fao_C Serine/threonine-protein kinase receptor R3; TGF-beta, CTK, cystine knot, extracellular domain, signaling protein-signaling protein complex; HET: NAG; 3.36A {Homo sapiens} PDB: 2lcr_A
Probab=96.66 E-value=0.0047 Score=40.55 Aligned_cols=55 Identities=27% Similarity=0.618 Sum_probs=38.0
Q ss_pred CCceEEEEEEeCCc-eEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCCCCCCCc
Q psy10606 47 PVICRKIIQKIYSK-RRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNGSPSLGQ 106 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~-~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~a~~~~~ 106 (128)
..+|.+.+...+|. ..+.|||....+. .|..... ..+.+.| |++|+||....+..
T Consensus 29 ~g~Cf~sv~~~~g~~~~~~~GCl~~~~~--~C~~s~~--~~~~i~C-C~tDfCN~~l~p~L 84 (106)
T 4fao_C 29 GAWCTVVLVREEGRHPQEHRGCGNLHRE--LCRGRPT--EFVNHYC-CDSHLCNHNVSLVL 84 (106)
T ss_dssp ESSEEEEEECCTTSCCEEEEECCCSCGG--GGGCCCC--SSEEEEE-ECSTTTTSSCCCCC
T ss_pred CCEeEEEEEEcCCceEEEEeCCCCCCcc--ccCCCCC--CceEEEe-cCccccCCCCCcCc
Confidence 57799987766664 4578999886432 5754332 2567899 99999997654443
No 39
>1drs_A Dendroaspin; cell adhesion protein; NMR {Dendroaspis jamesoni kaimosae} SCOP: g.7.1.2 PDB: 2la1_A
Probab=96.11 E-value=0.0033 Score=37.06 Aligned_cols=41 Identities=32% Similarity=0.557 Sum_probs=25.3
Q ss_pred CCceEEEEEEeCCceEEEEceecCcccCcccccccccCCceeEEEeeCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEERDDCYRRTGTFDVDSTYCACKGDICNG 100 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~~~~C~~~~~~~~~~~~~C~C~~D~CN~ 100 (128)
...|.|... .. ..+|.||| .... .. .+.....| |.+|.||.
T Consensus 19 ~~~Cyk~~~-~~-g~~i~RGC--tCP~------~~--~~~~~i~C-CsTD~CN~ 59 (59)
T 1drs_A 19 EDSCYKNIW-TF-DNIIRRGC--GCFT------PR--GDMPGPYC-CESDKCNL 59 (59)
T ss_dssp CSCEEECCC-TT-TTCCCCEE--CCCS------CC--SSCSSCEE-ESSSSSCC
T ss_pred CcEeEeEEe-cC-CCEEeeec--cCCC------CC--CCcccCEE-cCCccCCC
Confidence 677987643 22 36788999 3222 11 12222678 99999994
No 40
>2h62_D ACVR2B protein; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.7.1.3 PDB: 1nys_A 1nyu_A 2h64_C 1s4y_A
Probab=94.68 E-value=0.097 Score=33.76 Aligned_cols=53 Identities=19% Similarity=0.504 Sum_probs=36.9
Q ss_pred CCceEEEEEEeCCceEE-EEceecCccc---CcccccccccCCceeEEEeeCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRV-VRGCGYINEE---RDDCYRRTGTFDVDSTYCACKGDICNGS 101 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v-~R~C~~~~~~---~~~C~~~~~~~~~~~~~C~C~~D~CN~a 101 (128)
...|..+.....|...| .+||-....+ ...|.... ......+|.|.+|+||.-
T Consensus 38 ~~~C~~lW~~~~g~~~v~~qGCw~d~~~C~d~~eCv~t~--~~~~~~fCCC~gd~CN~n 94 (98)
T 2h62_D 38 RLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVATE--ENPQVYFCCCEGNFCNER 94 (98)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEECCGGGTTCSSEECCC--SSCSSEEEEESSTTTTSS
T ss_pred CCceEEEEEeCCCcEEEEEEcccCCCCCCCCcceeeccC--CCCCEEEEECCCCccccc
Confidence 77899998877777655 5899984331 12454332 345678998999999974
No 41
>1bte_A Protein (activin receptor type II); serine kinase, ligand binding domain, three-finger transferase; HET: NAG; 1.50A {Mus musculus} SCOP: g.7.1.3 PDB: 2goo_C* 1lx5_B*
Probab=94.43 E-value=0.11 Score=33.51 Aligned_cols=54 Identities=24% Similarity=0.535 Sum_probs=37.5
Q ss_pred CCceEEEEEEeCCceE-EEEceecCccc---CcccccccccCCceeEEEeeCCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRR-VVRGCGYINEE---RDDCYRRTGTFDVDSTYCACKGDICNGSP 102 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~-v~R~C~~~~~~---~~~C~~~~~~~~~~~~~C~C~~D~CN~a~ 102 (128)
...|..+.....|... +.+||.....+ ...|.... ......+|.|.+|+||.--
T Consensus 33 ~~~C~~lW~~~~g~~~i~~qGCw~d~~~C~d~~eCv~t~--~~~~~~fCCC~gd~CN~nf 90 (97)
T 1bte_A 33 RRHCFATWKNISGSIEIVKQGCWLDDINCYDRTDCIEKK--DSPEVYFCCCEGNMCNEKF 90 (97)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEECSCCCCSCSSSEEECS--SSCSSEEEEECSTTGGGSE
T ss_pred CCceEEEEeeCCCCEEEEEecccCCCCCCCCcceeecCC--CCCCEEEEECCCCccccCc
Confidence 7889999887777664 56899984331 12455433 2346789989999999754
No 42
>4fao_E Activin receptor type-2B; TGF-beta, CTK, cystine knot, extracellular domain, signaling protein-signaling protein complex; HET: NAG; 3.36A {Homo sapiens}
Probab=94.18 E-value=0.16 Score=34.12 Aligned_cols=54 Identities=19% Similarity=0.434 Sum_probs=36.8
Q ss_pred CCceEEEEEEeCCce-EEEEceecCccc--C-cccccccccCCceeEEEeeCCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKR-RVVRGCGYINEE--R-DDCYRRTGTFDVDSTYCACKGDICNGSP 102 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~-~v~R~C~~~~~~--~-~~C~~~~~~~~~~~~~C~C~~D~CN~a~ 102 (128)
...|..+.....|.. .+..||.....+ . ..|.... ......+|.|.+|+||.-.
T Consensus 40 ~~~Cf~lW~~~~g~~~i~~qGCw~d~~~C~~~~eCv~t~--~~~~~~fCCC~gdlCN~nf 97 (124)
T 4fao_E 40 RLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVATE--ENPQVYFCCCEGNFCNERF 97 (124)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEECCGGGTTCCSEEECC--SSCSEEEEEECSTTTTSSE
T ss_pred CCceEEEEecCCCCEEEEEecccCCCCCCCCCCeeeccC--CCCCcEEEecCCCccCCce
Confidence 678998887777765 456899985331 1 2454332 2346899999999999753
No 43
>2hlr_A Bone morphogenetic protein receptor type-2; three-finger toxin, BMP receptor, TGF-beta, transferase; 1.20A {Ovis aries} PDB: 2hlq_A
Probab=93.84 E-value=0.028 Score=36.44 Aligned_cols=55 Identities=22% Similarity=0.451 Sum_probs=29.4
Q ss_pred CCceEEEEEEeCCc-eEEEEceecCccc-----Cccccccccc---CCceeEEEeeCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSK-RRVVRGCGYINEE-----RDDCYRRTGT---FDVDSTYCACKGDICNGS 101 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~-~~v~R~C~~~~~~-----~~~C~~~~~~---~~~~~~~C~C~~D~CN~a 101 (128)
...|..+.....|. ..+.+||.....+ ...|...+.. ....+.+|.|.+|+||.-
T Consensus 32 ~~~Cf~lW~~~~g~~~v~~qGCW~~~~d~~~C~~~eCv~t~~~~~~~n~~~~FCCC~gd~CN~n 95 (100)
T 2hlr_A 32 GSTCYGLWEKSKGDINLVKQGCWSHIGDPQECHYEECVVTTTPPSIQNGTYRFCCCSTDLCNVN 95 (100)
T ss_dssp TCEEEEEC-------CCCEEEEECCCSCTTTSBSSSCBCC----------CCEEEESSTTGGGS
T ss_pred CCcEEEEEeeCCCcEEEEEecCcCcCCCCCCCCCCcccccCCCcccCCCCEEEEECCCCccccc
Confidence 46798886655554 4567999984221 1256543321 234567998999999964
No 44
>1ks6_A Transforming growth factor beta type II receptor; three finger toxin fold, hormone/growth factor complex; NMR {Gallus gallus} SCOP: g.7.1.3
Probab=66.51 E-value=23 Score=22.81 Aligned_cols=56 Identities=14% Similarity=0.314 Sum_probs=40.8
Q ss_pred CCceEEEEEEeCCceEEEEceecCcc----------cCcccccccc-cCCceeEEEeeCCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINE----------ERDDCYRRTG-TFDVDSTYCACKGDICNGSP 102 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~----------~~~~C~~~~~-~~~~~~~~C~C~~D~CN~a~ 102 (128)
.-+|+.|.-+.++...+.--|--... +...|.++.- ..+.....|.|.+|.||---
T Consensus 36 ~EVCvAiWrk~~~nitieTlCHdP~~~l~g~~l~d~nss~C~M~e~~~~g~~~~iCSC~~eECND~L 102 (107)
T 1ks6_A 36 NEVCAAVWRRNDENVTLETICHDPQKRLYGHMLDDSSSEQCVMKEKKDDGGLMFMCSCTGEECNDVL 102 (107)
T ss_dssp SCCEEEEEEEETTEEEEEEECCCTTSCBTTBCCSCSSSSSCBCEEECCSSSEEEEEEESSSSTTTBC
T ss_pred hhEEEEEEEEcCCceEEEEeecCCCccccCcCccCCCCCeeEEeeccCCCCcEEEEecCcccccceE
Confidence 77899999988888788788875422 1127876542 34567889999999999643
No 45
>1m9z_A TGF-beta receptor type II; three finger toxin fold, hormone-growth factor complex; 1.05A {Homo sapiens} SCOP: g.7.1.3 PDB: 1plo_A 1ktz_B 2pjy_B
Probab=65.10 E-value=25 Score=22.77 Aligned_cols=55 Identities=16% Similarity=0.304 Sum_probs=40.1
Q ss_pred CCceEEEEEEeCCceEEEEceecCcc----------cCcccccccc-cCCceeEEEeeCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINE----------ERDDCYRRTG-TFDVDSTYCACKGDICNGS 101 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~----------~~~~C~~~~~-~~~~~~~~C~C~~D~CN~a 101 (128)
.-+|+.|.-+.++...+.--|--... +...|.++.. ..+.....|.|.+|.||--
T Consensus 33 ~EVCvaiWrk~~~nitieT~CHdP~~~l~g~~L~d~nss~CiMke~~~~g~~~~~CSC~~eECND~ 98 (111)
T 1m9z_A 33 QEVCVAVWRKNDENITLETVCHDPKLPYHDFILEDAASPTCIMKEKKKPGETFFMCSCSSDECNDN 98 (111)
T ss_dssp TCEEEEEEEECSSCEEEEEEEECTTSCBTTBCCTTTTCSSEECEEECCTTSEEEEEEECSTTGGGE
T ss_pred hhEEEEEEEEcCCceEEEEeEcCCCccccCcCcccCCCCeeEEeeccCCCCcEEEEecCcccccce
Confidence 77899999988887778788885422 1127776542 3356788999999999954
No 46
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=62.52 E-value=13 Score=19.90 Aligned_cols=21 Identities=19% Similarity=0.238 Sum_probs=14.6
Q ss_pred CCcchHHHHHHHHHHHHHHHh
Q psy10606 104 LGQSTSLVVTSLLAAVVLLAQ 124 (128)
Q Consensus 104 ~~~~~~ll~~~~~~~~~~~~~ 124 (128)
...+.+.+++++++++.+|++
T Consensus 6 ~~vp~wiIi~s~l~GLllL~l 26 (42)
T 2k1a_A 6 RAIPIWWVLVGVLGGLLLLTI 26 (42)
T ss_dssp CCCCHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHH
Confidence 346677777788777777654
No 47
>3kfd_E TGF-beta receptor type-2; TGF-beta recepto tbrii, TBRI, growth factor, serine/threonine-PROT kinase, cytokine-cytokine receptor complex; 3.00A {Homo sapiens}
Probab=59.43 E-value=33 Score=22.43 Aligned_cols=56 Identities=16% Similarity=0.283 Sum_probs=40.4
Q ss_pred CCceEEEEEEeCCceEEEEceecCccc----------Ccccccccc-cCCceeEEEeeCCCCCCCCC
Q psy10606 47 PVICRKIIQKIYSKRRVVRGCGYINEE----------RDDCYRRTG-TFDVDSTYCACKGDICNGSP 102 (128)
Q Consensus 47 ~~~C~Ki~~~~~g~~~v~R~C~~~~~~----------~~~C~~~~~-~~~~~~~~C~C~~D~CN~a~ 102 (128)
.-+|+.|.-+.++...+.--|--...+ ...|.++.. ..+.....|.|.+|.||---
T Consensus 44 eEVCvAiWRk~~~nitieTlCHdP~~~l~G~~L~d~nss~C~Mke~~~~gg~~~iCSC~~eECND~L 110 (116)
T 3kfd_E 44 QEVCVAVWRKNDENITLETVCHDPKLPYHDFILEDAASPKCIMKEKKKPGETFFMCSCSSDECNDNI 110 (116)
T ss_dssp TCEEEEEEEECSSCEEEEEEEECTTSBSSSCBCSSTTBSSEECCCEEETTEEEEEEEECSTTGGGSE
T ss_pred ceEEEEEEEECCCceEEEEeecCCCccccccEeccCCCCeeEEEeccCCCCcEEEEecCchhcCceE
Confidence 778999999888877888888854321 126776542 23567889999999999643
No 48
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=58.42 E-value=14 Score=20.87 Aligned_cols=20 Identities=20% Similarity=0.287 Sum_probs=14.1
Q ss_pred CcchHHHHHHHHHHHHHHHh
Q psy10606 105 GQSTSLVVTSLLAAVVLLAQ 124 (128)
Q Consensus 105 ~~~~~ll~~~~~~~~~~~~~ 124 (128)
..+++.+++++++++.+|++
T Consensus 9 ~vp~wiIi~svl~GLllL~l 28 (54)
T 2knc_A 9 AIPIWWVLVGVLGGLLLLTI 28 (54)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHH
Confidence 45677777787777776653
No 49
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=58.19 E-value=13 Score=21.07 Aligned_cols=20 Identities=20% Similarity=0.233 Sum_probs=13.5
Q ss_pred CcchHHHHHHHHHHHHHHHh
Q psy10606 105 GQSTSLVVTSLLAAVVLLAQ 124 (128)
Q Consensus 105 ~~~~~ll~~~~~~~~~~~~~ 124 (128)
..+++.+++++++++.+|++
T Consensus 6 ~vp~WiIi~svl~GLLLL~L 25 (54)
T 2l8s_A 6 RVPLWVILLSAFAGLLLLML 25 (54)
T ss_dssp CCCTHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHH
Confidence 45677777777777766653
No 50
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=27.28 E-value=32 Score=20.77 Aligned_cols=14 Identities=29% Similarity=0.254 Sum_probs=7.0
Q ss_pred HHHHHHHHHHhhhc
Q psy10606 114 SLLAAVVLLAQNRL 127 (128)
Q Consensus 114 ~~~~~~~~~~~~~~ 127 (128)
.+++++++|+.+|+
T Consensus 21 illiGllllliwk~ 34 (79)
T 2knc_B 21 ILLIGLAALLIWKL 34 (79)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34445555555543
No 51
>1vf5_F Protein PET M; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.25.1 PDB: 2d2c_F* 2e74_F* 2e75_F* 2e76_F* 2zt9_F*
Probab=20.81 E-value=98 Score=15.78 Aligned_cols=18 Identities=22% Similarity=0.239 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHhhh
Q psy10606 109 SLVVTSLLAAVVLLAQNR 126 (128)
Q Consensus 109 ~ll~~~~~~~~~~~~~~~ 126 (128)
.++++.+.+++.+|-.++
T Consensus 14 ~LvLvGla~Gf~LLkiqg 31 (35)
T 1vf5_F 14 GLIFVGWGLGVLLLKIQG 31 (35)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhheeec
Confidence 355667777888776553
No 52
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=20.19 E-value=59 Score=17.20 Aligned_cols=13 Identities=31% Similarity=0.319 Sum_probs=6.7
Q ss_pred HHHHHHHHHhhhc
Q psy10606 115 LLAAVVLLAQNRL 127 (128)
Q Consensus 115 ~~~~~~~~~~~~~ 127 (128)
++.+++++..+|+
T Consensus 21 vliGl~lLliwk~ 33 (43)
T 2k9j_B 21 LLIGLAALLIWKL 33 (43)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4445555555554
No 53
>2jve_A PROD1; LY-6, three-finger snake toxin, UPAR, CD59, LIMB regeneration; NMR {Notophthalmus viridescens}
Probab=20.19 E-value=72 Score=18.99 Aligned_cols=16 Identities=38% Similarity=0.744 Sum_probs=12.1
Q ss_pred ceeEEEeeCCCCCCCCC
Q psy10606 86 VDSTYCACKGDICNGSP 102 (128)
Q Consensus 86 ~~~~~C~C~~D~CN~a~ 102 (128)
.....| |-+|+||-+.
T Consensus 75 gypakc-ccedlcnrse 90 (91)
T 2jve_A 75 GYPAKC-CCEDLCNRSE 90 (91)
T ss_dssp TCCEEE-ECSTTCSCSC
T ss_pred CCchhh-hHHHHhcccc
Confidence 345678 8899999764
Done!