BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10608
(445 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 340 bits (872), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/352 (46%), Positives = 243/352 (69%), Gaps = 1/352 (0%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSK 85
I K YI+G++VESK + D+ NPAT EV+ +VP +T +++ A +A +A++TWSK
Sbjct: 2 EIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSK 61
Query: 86 TSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM 145
++ R ++LF Q ++ + ++LA IT E GK +A G+V RG++ VE P++M
Sbjct: 62 VAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLM 121
Query: 146 QGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
G++LA +A D++ +YR P+GV GI PFNFP M+P WMFP+AIA GNT ++KPSER P
Sbjct: 122 MGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTP 181
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265
LV++ +AG P GV NV++GAHD VN I +HP+I+AISFVGS G+Y+Y++G++
Sbjct: 182 LLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241
Query: 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTV-IFVGEAVEWLP 324
N KRVQS GAKNH ++++DAN +T+ +VGAAFG+AG+RCMA + V + G A E++
Sbjct: 242 NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMA 301
Query: 325 ELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+L+++ +K+ G G LGPVI K+R LS I+ G++EGA L+ DGR
Sbjct: 302 KLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD 431
+GIN+ +P P++ F F+G + SF G H GK FYT K VT + D
Sbjct: 433 LGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPAPD 484
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 217/350 (62%), Gaps = 2/350 (0%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
+IDGK V + ++ NPAT EV V A+ A++ +AV SAK A W+ T+ R
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA 89
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAG 152
+V + ++ N +LAE ++ E GKT+ DA+GD++RGL+V E IP + + E G
Sbjct: 90 RVFXKFVQLLNDNXNELAEXLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEG 149
Query: 153 VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLV 212
+D +S R P+G+ AGITPFNFP IP W F AIACGN ++KPSERDP + L
Sbjct: 150 AGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLA 209
Query: 213 DMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQS 272
++ +AG P G++NV++G AV+ I HPDI A+SFVGS +Y+Y A NGKR Q
Sbjct: 210 ELXIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAXNGKRAQC 269
Query: 273 NMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRA 330
GAKNH +I DA+ N L+GA +G+AG+RC A+S + VGE A + +L
Sbjct: 270 FGGAKNHXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXV 329
Query: 331 EALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
E+L++ D GPV++ +A++RI SLI SG+++GA L++DGR+ K+
Sbjct: 330 ESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKL 379
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 380 VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427
VG+NVPIPVPL+ SF G + S G+ + +G F+T TKT+T W
Sbjct: 458 VGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSRW 505
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 191/393 (48%), Gaps = 38/393 (9%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
+I G+FV S++ + +PATNEV+ + E++ A +A +A++ WS+T R+
Sbjct: 30 FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERK 89
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAG 152
+ L R+ +I+ + +LA + G+ L V R + +
Sbjct: 90 RYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFP 149
Query: 153 VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLV 212
V +D ++ RVP G ITP+N P M+ W A+A GNT V+KP+E P L
Sbjct: 150 VDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLA 209
Query: 213 DMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQ 271
++L +A PPGV N++ G +A + HP + ++ G + GK + A + KR+
Sbjct: 210 EILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRLS 269
Query: 272 SNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI--------FVGEAVEWL 323
+G K+ ++ +DA+ L+ +V F G+RC A S ++ FVG+ VE
Sbjct: 270 PELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVE-- 327
Query: 324 PELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVGIN 383
RA A++V P T++GP+I P+ +R+L +++G EGA LL+ G K
Sbjct: 328 -----RARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKT--- 379
Query: 384 VPIPVPLSMFSFTG---SRGSFL------GENH 407
SF G SRG++L GENH
Sbjct: 380 ----------SFRGEDLSRGNYLLPTVFVGENH 402
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 181/347 (52%), Gaps = 7/347 (2%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
+IDG +VE + PAT E++ ++ ATPA +E A+ASAK+A + W+ S + R
Sbjct: 18 FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARG 77
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSI-PTIMQGETL 150
++L R +I++ L+ T + GK + + D G E I P+ + G+ +
Sbjct: 78 RILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYI 137
Query: 151 AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMM 210
+ D ++ RVPLGV GI +N+P I W A+ GN V KPSE P +
Sbjct: 138 P-LGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALK 195
Query: 211 LVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
+ ++L +AG P G+ NVI G D + +HPD+ +S GS G+ + A + K V
Sbjct: 196 IAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAGHLKHV 255
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVE--WLPELKK 328
+G K+ ++ DA+ + + + F ++GQ C + T +FV + + +L LK+
Sbjct: 256 TMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVC-SNGTRVFVQKKAKARFLENLKR 314
Query: 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
R EA+ + T LGP++S +E++LS I+ G EGATL+ G
Sbjct: 315 RTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG 361
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 186/356 (52%), Gaps = 7/356 (1%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
KLYI G++VE+ + + NPA EV+ +V +A+ ++E AV SA + + W+ + +
Sbjct: 8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQ 67
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGET 149
R ++L R +I++ +LA T + GK LA+ D++ G V+E + ++GE
Sbjct: 68 RSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQ 127
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ + + +++ R PLGV AGI +N+P I LW A+A GN + KPSE P +
Sbjct: 128 IP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186
Query: 210 MLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNG- 267
L ++ T+AG P GV NV+ G+ V ++ +HP I ISF G GK + + +
Sbjct: 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSL 246
Query: 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELK 327
K V +G K+ +I DA+ + V A F ++GQ C T +F+ + + E K
Sbjct: 247 KEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN-GTRVFIHRSQQARFEAK 305
Query: 328 --KRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+R + +++ T+ GP++S E +L I+SG + A LL G + G
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDG 361
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 186/356 (52%), Gaps = 7/356 (1%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
KLYI G++VE+ + + NPA EV+ +V +A+ ++E AV SA + + W+ + +
Sbjct: 7 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQ 66
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGET 149
R ++L R +I++ +LA T + GK LA+ D++ G V+E + ++GE
Sbjct: 67 RSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQ 126
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ + + +++ R PLGV AGI +N+P I LW A+A GN + KPSE P +
Sbjct: 127 IP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 185
Query: 210 MLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNG- 267
L ++ T+AG P GV NV+ G+ V ++ +HP I ISF G GK + + +
Sbjct: 186 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSL 245
Query: 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELK 327
K V +G K+ +I DA+ + V A F ++GQ C T +F+ + + E K
Sbjct: 246 KEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN-GTRVFIHRSQQARFEAK 304
Query: 328 --KRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+R + +++ T+ GP++S E +L I+SG + A LL G + G
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDG 360
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 186/356 (52%), Gaps = 7/356 (1%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
KLYI G++VE+ + + NPA EV+ +V +A+ ++E AV SA + + W+ + +
Sbjct: 7 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQ 66
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGET 149
R ++L R +I++ +LA T + GK LA+ D++ G V+E + ++GE
Sbjct: 67 RSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQ 126
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ + + +++ R PLGV AGI +N+P I LW A+A GN + KPSE P +
Sbjct: 127 IP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 185
Query: 210 MLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNG- 267
L ++ T+AG P GV NV+ G+ V ++ +HP I ISF G GK + + +
Sbjct: 186 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSL 245
Query: 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELK 327
K V +G K+ +I DA+ + V A F ++GQ C T +F+ + + E K
Sbjct: 246 KEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTN-GTRVFIHRSQQARFEAK 304
Query: 328 --KRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+R + +++ T+ GP++S E +L I+SG + A LL G + G
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDG 360
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 174/349 (49%), Gaps = 5/349 (1%)
Query: 33 YIDGKFVESKATDWID-LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
Y G+ ++SK + + PAT V+ ++ E++ AV SA+ AY WSK + I R
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIER 82
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA 151
+V+ II+ +A+ GKT+ +AE D+ Q +E + + G+ +
Sbjct: 83 SRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQ 142
Query: 152 GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211
+ ++ R PLGV AGI +N+P MI W A+ACGN V KPS P ++L
Sbjct: 143 -LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVIL 201
Query: 212 VDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQ 271
++ +AG P G+VNV+ G + + +C HP++ +SF GS GK + E AK K V
Sbjct: 202 AEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVT 261
Query: 272 SNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKR 329
+G K+ +I D N + + A F GQ C T +FV + ++L E+ KR
Sbjct: 262 LELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTN-GTRVFVQREIMPQFLEEVVKR 320
Query: 330 AEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
+A+ V + T +G +IS +++L + EGA +L G L
Sbjct: 321 TKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPL 369
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 185/356 (51%), Gaps = 7/356 (1%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
KLYI G++VE+ + + NPA EV+ +V +A+ ++E AV SA + + W+ + +
Sbjct: 8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQ 67
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGET 149
R ++L R +I++ +LA T + GK LA+ D++ G V+E + ++GE
Sbjct: 68 RSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQ 127
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ + + +++ R PLGV AGI +N+P I LW A+A GN + KPSE P +
Sbjct: 128 IP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186
Query: 210 MLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNG- 267
L ++ T+AG P GV NV+ G+ V ++ +HP I ISF G GK + + +
Sbjct: 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSL 246
Query: 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELK 327
K V +G K+ +I DA+ + V A F ++GQ T +F+ + + E K
Sbjct: 247 KEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQ-VXTNGTRVFIHRSQQARFEAK 305
Query: 328 --KRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+R + +++ T+ GP++S E +L I+SG + A LL G + G
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDG 361
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 185/356 (51%), Gaps = 7/356 (1%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
KLYI G++VE+ + + NPA EV+ +V +A+ ++E AV SA + + W+ + +
Sbjct: 8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQ 67
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGET 149
R ++L R +I++ +LA T + GK LA+ D++ G V+E + ++GE
Sbjct: 68 RSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQ 127
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ + + +++ R PLGV AGI +N+P I LW A+A GN + KPSE P +
Sbjct: 128 IP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTAL 186
Query: 210 MLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNG- 267
L ++ T+AG P GV NV+ G+ V ++ +HP I ISF G GK + + +
Sbjct: 187 KLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSL 246
Query: 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELK 327
K V +G K+ +I DA+ + V A F ++GQ T +F+ + + E K
Sbjct: 247 KEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQ-VATNGTRVFIHRSQQARFEAK 305
Query: 328 --KRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+R + +++ T+ GP++S E +L I+SG + A LL G + G
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDG 361
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 187/360 (51%), Gaps = 4/360 (1%)
Query: 34 IDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQ 93
I+G+++++ + ID+ NPA + + VPK E +A+ +A +A W + R
Sbjct: 14 INGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERAT 73
Query: 94 VLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGV 153
+L N++ + LA +T EQGK LA+A+G++ +E + G+T+ G
Sbjct: 74 ILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGH 133
Query: 154 AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVD 213
D + + P+GVTA ITP+NFPA + A+A G T V+KP+ + P + + L +
Sbjct: 134 QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAE 193
Query: 214 MLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQS 272
+ +AG P GV NV+ G+ AV N + +P +R +SF GS + G+ + E+ AK+ K+V
Sbjct: 194 LAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSL 253
Query: 273 NMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRA 330
+G ++ DA+ + + + F AGQ C+ + ++V + V + +L++
Sbjct: 254 ELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRLYVQDGVYDRFAEKLQQAM 312
Query: 331 EALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVGINVPIPVPL 390
L + G G +GP+I +A ++ I +++GA ++ G+ + G N P L
Sbjct: 313 SKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTIL 372
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 187/360 (51%), Gaps = 4/360 (1%)
Query: 34 IDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQ 93
I+G+++++ + ID+ NPA + + VPK E +A+ +A +A W + R
Sbjct: 14 INGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERAT 73
Query: 94 VLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGV 153
+L N++ + LA +T EQGK LA+A+G++ +E + G+T+ G
Sbjct: 74 ILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGH 133
Query: 154 AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVD 213
D + + P+GVTA ITP+NFPA + A+A G T V+KP+ + P + + L +
Sbjct: 134 QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAE 193
Query: 214 MLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQS 272
+ +AG P GV NV+ G+ AV N + +P +R +SF GS + G+ + E+ AK+ K+V
Sbjct: 194 LAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSL 253
Query: 273 NMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRA 330
+G ++ DA+ + + + F AGQ C+ + ++V + V + +L++
Sbjct: 254 ELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRLYVQDGVYDRFAEKLQQAM 312
Query: 331 EALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVGINVPIPVPL 390
L + G G +GP+I +A ++ I +++GA ++ G+ + G N P L
Sbjct: 313 SKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTIL 372
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 185/359 (51%), Gaps = 5/359 (1%)
Query: 22 QFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE 81
+ ++H+ + + YIDG++VES + D+ NP EV+ V + T + E A+ +A++A+E
Sbjct: 26 ELLKHL-SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFE 84
Query: 82 T--WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCC 139
+ WS+ + TR + + + + IK + + LA T + GKTL ++ D+ V
Sbjct: 85 SGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFA 144
Query: 140 SIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIK 199
+ GE + D + + P+GV ITP+N+P + W A+A G + V+K
Sbjct: 145 GLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMK 204
Query: 200 PSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKY 258
PSE P + + +++ + G P G +N+I GA V + + H ++ +SF G + GK+
Sbjct: 205 PSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKH 264
Query: 259 IYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
I + A N + +G KN +I DA+ ++Q + + AGQ C A S ++
Sbjct: 265 IMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNS 324
Query: 319 AVEWLPE-LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
+ + L R + +K+ G T++GPVIS + + +I S + EGAT+ + G+
Sbjct: 325 IKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGK 383
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 183/356 (51%), Gaps = 14/356 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET---WSKT 86
TK++I+ ++ S + + NPAT E + V + +++ AV +A++A++ W
Sbjct: 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTM 80
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRG-LQVVEQCCSIPTIM 145
R ++L +L ++I+ + LA GK ++A L G ++ + C +
Sbjct: 81 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKI 140
Query: 146 QGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
QG T + D + +Y P+GV I P+NFP ++ LW A++CGNT V+KP+E+
Sbjct: 141 QGRT---IPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQ 197
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262
P + + ++ +AG PPGVVN++ G A I H D+ ++F GS + GK I E
Sbjct: 198 TPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEA 257
Query: 263 GAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
K N KRV +G K+ ++ +DA+ N + F GQ C+A S +FV E++
Sbjct: 258 AGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASR-LFVEESIY 316
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
E++ +RA+ + PG GP I + E+IL LI+SG EGA L G
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGG 372
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 188/378 (49%), Gaps = 15/378 (3%)
Query: 9 SLQRTPSHMKTFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAE 68
SLQ PS I TK++I+ ++ S++ + NPAT E V V +A +
Sbjct: 3 SLQLLPSPTPNL-----EIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVD 57
Query: 69 MESAVASAKKAYE---TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE 125
++ AV +A+ A+ W + R ++L +L ++++ + LA + GK A
Sbjct: 58 IDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAF 117
Query: 126 GDVLRG-LQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184
L+G ++ + + G T+ V D + P+GV I P+NFP ++ W
Sbjct: 118 YIDLQGVIKTLRYYAGWADKIHGMTIP-VDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTW 176
Query: 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPD 243
A+ CGNT VIKP+E+ P + + + ++ +AG PPGVVN++ G A I H
Sbjct: 177 KIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIG 236
Query: 244 IRAISFVGSDQAGKYIYE-RGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGA 302
I I+F GS + GK I E G N KRV +G K+ +I +DA+ + Q F
Sbjct: 237 IDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFN 296
Query: 303 AGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSL 360
GQ C A S IFV E++ E++ +RA+ V + P T+ GP I + +IL L
Sbjct: 297 QGQCCTAGSR-IFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILEL 355
Query: 361 IQSGVDEGATLLLDGRNL 378
IQSGV EGA L G+ L
Sbjct: 356 IQSGVAEGAKLECGGKGL 373
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 184/359 (51%), Gaps = 14/359 (3%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET---W 83
I TKL+I+ ++ ES + + NPAT E + V +A +++ AV +A++A++ W
Sbjct: 18 IQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPW 77
Query: 84 SKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIP 142
R Q++++L ++I+ + LA + GK A A D+ ++ + C
Sbjct: 78 RTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWA 137
Query: 143 TIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
+QG T + D + SY P+GV I P+N P ++ A+ CGNT ++KP
Sbjct: 138 DKIQGRT---IPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKP 194
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYI 259
+E+ P + + ++ +AG PPGVVN++ G A I H D+ ++F GS + GK I
Sbjct: 195 AEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMI 254
Query: 260 YERGAK-NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
E AK N KRV +GAKN ++ +DA+ + + F GQ C+A S +FV E
Sbjct: 255 QEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASK-LFVEE 313
Query: 319 AV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
A+ E++ +RA+ PG + GP I+ +I+ LI+SG EGA L G
Sbjct: 314 AIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGG 372
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 175/349 (50%), Gaps = 8/349 (2%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
TK YI+G++VES + + I++ NPAT EV+ +V K A+++ AV +A Y + TS+
Sbjct: 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVK 67
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGE 148
RQ +L ++ + + + IT+E G L+ +E GL + E
Sbjct: 68 ERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXGLNHFVAARDALDNYEFE 127
Query: 149 TLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208
G D + +GV+ ITP+NFP A A G+ V+KPSE P A
Sbjct: 128 ERRG-----DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAA 182
Query: 209 MMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267
++L ++ + G P GV N+++G V N + +HP +R SF GS G I E+ AK+
Sbjct: 183 VILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAAKDF 242
Query: 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVE-WLPEL 326
K+V +G K+ +++ D + G GQ C A + V+ + + +L EL
Sbjct: 243 KKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAEL 302
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
K++ ++V GT +GP+IS + +++ + I G++EGA L G
Sbjct: 303 KEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGG 351
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 190/415 (45%), Gaps = 42/415 (10%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWS 84
I +L+IDG++ E + I + NP+T E++ +P AT ++E AV +A++A+ WS
Sbjct: 5 IPARQLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWS 64
Query: 85 KTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTI 144
TS R L + I + T + GK +A D+ E
Sbjct: 65 ATSGAHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVLDIDDVASCFEYFAGQAEA 124
Query: 145 MQGETLAGVAKDMD---IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 201
+ G+ A V M+ H R PLGV I+P+N+P ++ W A+A G T V+KPS
Sbjct: 125 LDGKQKAPVTLPMERFKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPS 184
Query: 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIY 260
E C+ ++ + G PPGV+N++ G DA + HPD+ I+F GS G +
Sbjct: 185 ELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM 244
Query: 261 ERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV 320
A+ K V +G K+ V+ D + + + F GQ C A S ++ V E++
Sbjct: 245 ASAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLL-VHESI 303
Query: 321 --EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
E++ +L K + +K+S G LGPVIS ++I+ I + EGAT+L
Sbjct: 304 AAEFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATIL------ 357
Query: 379 KVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFY----FYTETKTVTQLWRE 429
+ GSR L K+G+Y T+ T Q+W+E
Sbjct: 358 ----------------YGGSRPEHL-------KKGYYIEPTIVTDISTSMQIWKE 389
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 177/358 (49%), Gaps = 4/358 (1%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSK 85
H +I G++V S +D ID+ +P+T +V+ +P A+ E+A+ A+ A + W+K
Sbjct: 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAK 68
Query: 86 TSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM 145
+ TRQ +L N I+ N LA + EQGK L+ AE +V ++ C +
Sbjct: 69 LTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTI 128
Query: 146 QGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
+G+ L +D I+ ++VP GV GIT +NFP + A+ GNT V+KP++ P
Sbjct: 129 EGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETP 188
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGA 264
A L + +AG P GV+NVI+G V +C+ P + I+ GS AGK IY+ A
Sbjct: 189 LATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA 248
Query: 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EW 322
+ V +G K V+M DA+ + F GQ C + ++V +V E+
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVER-LYVHASVYDEF 307
Query: 323 LPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKV 380
+ + + LKV + +GP + + + I ++ + +GAT+ G+ V
Sbjct: 308 MAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATV 365
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 190/378 (50%), Gaps = 27/378 (7%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
K YI+G + + + + +P+T E + + + + A+ +AKKA++TW TS
Sbjct: 27 KFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHE 86
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTL--------ADAEGDVLRGLQVVEQCCSIP 142
R + ++ I + +A+ I+ E G + A + ++ ++
Sbjct: 87 RLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQE 146
Query: 143 TIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPA-MIPLWMFPVAIACGNTHVIKPS 201
+++G A + D +GV ITP+N+P + L + P A+ G T V+KPS
Sbjct: 147 ALIEGNEQAILHYD--------AIGVVGLITPWNWPMNQVTLKVIP-ALLAGCTMVLKPS 197
Query: 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVN---FICDHPDIRAISFVGSDQAGKY 258
E P + M+ ++L +A P GV N+I+G D N ++ HPD+ ISF GS +AGK
Sbjct: 198 EIAPLSAMLFAEILDEAALPSGVFNLING--DGANVGSYLSAHPDLEMISFTGSTRAGKD 255
Query: 259 IYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE 318
I + + KRV +G K +I +DA+ + L + V F +GQ C A T + V +
Sbjct: 256 ISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNA-PTRMLVEQ 313
Query: 319 AV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
A+ + + K AE +V G+ G +GPV+S + ++I LIQSG+DEGATL+ G
Sbjct: 314 AIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGT 373
Query: 377 NLKVGINVPIPVPLSMFS 394
L +G+ V ++F+
Sbjct: 374 GLPMGMERGYYVRPTVFA 391
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 180/361 (49%), Gaps = 12/361 (3%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY-----E 81
+++ +L+IDG++ I NP+T ++ +P AT +++ AV +AK+A
Sbjct: 5 VSSRQLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGR 64
Query: 82 TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI 141
WS S R + L + IK +L + + + GK L +A D+ + E +
Sbjct: 65 DWSAASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEALADLDDVVACFEYYAGL 124
Query: 142 PTIMQGETLAGVAKDMD-IHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVI 198
+ + A ++ MD SY + P+GV A ITP+N+P ++ W A+A G ++
Sbjct: 125 AEELDSKQKAPISLPMDTFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAIL 184
Query: 199 KPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGK 257
KPSE C+ L ++ + G P GV+N++ G H+A + HPD+ ISF GS G
Sbjct: 185 KPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGS 244
Query: 258 YIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVG 317
I A+ K V +G K+ V+ D + V F GQ C A S +I V
Sbjct: 245 KIMTTAAQLVKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLI-VH 303
Query: 318 E--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
E AVE++ +L K AE +K+S G LGP++S +++L+ I S EGAT+L G
Sbjct: 304 ESIAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGG 363
Query: 376 R 376
R
Sbjct: 364 R 364
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 178/355 (50%), Gaps = 15/355 (4%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
++IDGK++ + D I NP + EV+ ++P + E + A+ +A+K E I R
Sbjct: 2 MFIDGKWINREDMDVI---NPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKR 58
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA 151
+L + IK ++LA+ + + GK + A +V R + + + E +
Sbjct: 59 YNILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIP 118
Query: 152 GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211
+ D I + R P+G+ ITPFNFP + AIA GN V PS + P C+ L
Sbjct: 119 --SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIEL 176
Query: 212 VDMLTQA----GCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKN 266
++ A P GV N++ GA + V + I + + ISF GS + G+ I ++
Sbjct: 177 AKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234
Query: 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLP 324
K++ +G N +++ DA+ + +N L+ +F AGQ C+++ +I V E++ +++
Sbjct: 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVG-MILVDESIADKFIE 293
Query: 325 ELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK 379
+A+ L V TD+GP+IS + E + +++ +DEG LLL G+ K
Sbjct: 294 MFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK 348
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 181/352 (51%), Gaps = 4/352 (1%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
++ ++G+++++ I + NPA V+ VP + A ++ A+ ++ KA W+ +
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAK 92
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R +L + ++I AN +A +T EQGK LA+A G+VL +E + G+T
Sbjct: 93 ERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDT 152
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ + R P+GVTA ITP+NFPA + A+A G T +++P++ P +
Sbjct: 153 IPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212
Query: 210 MLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGK 268
L + +AG P GV+ ++ G A + + + +R +SF GS + G+ + + A K
Sbjct: 213 ALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIK 272
Query: 269 RVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPEL 326
R+ +G ++ DA+ ++ + + + AGQ C+ + I+V V ++ +L
Sbjct: 273 RISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVC-ANRIYVQRGVYDKFAEKL 331
Query: 327 KKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
+ + LKV G PG +GP+I +A ++ + I+ V +GA L+ G+ L
Sbjct: 332 AAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL 383
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 188/359 (52%), Gaps = 13/359 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSI 88
+L+I G+FV+++ + + NP V+ +V A ++++ AVA+AK+A+E W K +
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQG 147
R ++L+RL ++++ + ++LA + G A + V +Q +QG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 148 ETL----AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
T+ A +++ + + + P+GV + P+N+P M+ W +A GNT VIKP++
Sbjct: 158 ATIPINQARPNRNLTL-TKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER 262
P + ++ +AG P GVVN++ G+ V + DHPD+R I F GS + GK+I +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 263 GA-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
A N K+V +G K+ +I +D + + + + + F G+ C+A +FV E++
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR-LFVEESIH 335
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
+++ ++ + E +K+ T+ GP +++ Q GV EGATL+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV 394
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 188/359 (52%), Gaps = 13/359 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSI 88
+L+I G+FV+++ + + NP V+ +V A ++++ AVA+AK+A+E W K +
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQG 147
R ++L+RL ++++ + ++LA + G A + V +Q +QG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 148 ETL----AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
T+ A +++ + + + P+GV + P+N+P M+ W +A GNT VIKP++
Sbjct: 158 ATIPINQARPNRNLTL-TKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER 262
P + ++ +AG P GVVN++ G+ V + DHPD+R I F GS + GK+I +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 263 GA-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
A N K+V +G K+ +I +D + + + + + F G+ C+A +FV E++
Sbjct: 277 CALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR-LFVEESIH 335
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
+++ ++ + E +K+ T+ GP +++ Q GV EGATL+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV 394
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 171/353 (48%), Gaps = 7/353 (1%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
+YIDG+FV + WID+ NPAT V++R+P + A+ +A++A W I R
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA 151
L ++ I+ +++ I EE GK AE +V ++ +GE +
Sbjct: 69 ASWLRKISAGIRERATEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQ 128
Query: 152 GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211
+I ++ LGVT GI P+NFP + A+ GNT VIKPSE P +
Sbjct: 129 SDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAF 188
Query: 212 VDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
++ + G P GV N++ G + V + +P + +S GS AG+ I AKN +V
Sbjct: 189 AKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKV 248
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRA 330
+G K ++M DA+ + +V + +GQ C V +V + + + + +
Sbjct: 249 CLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERV-YVQKGI-YDQFVNRLG 306
Query: 331 EALK-VSAGNVPGTD---LGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK 379
EA++ V GN + +GP+I+ A ER+ + V+EGA + L G+ ++
Sbjct: 307 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVE 359
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 170/353 (48%), Gaps = 7/353 (1%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
+YIDG+FV + WID+ NPAT V++R+P + A+ +A++A W I R
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA 151
L ++ I+ +++ I EE GK AE +V ++ +GE +
Sbjct: 69 ASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQ 128
Query: 152 GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211
+I ++ LGVT GI P+NFP + A+ GNT VIKPSE P +
Sbjct: 129 SDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAF 188
Query: 212 VDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
++ + G P GV N++ G + V + +P + +S GS AG+ I AKN +V
Sbjct: 189 AKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKV 248
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRA 330
+G K ++M DA+ + +V + +GQ C V +V + + + + +
Sbjct: 249 XLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERV-YVQKGI-YDQFVNRLG 306
Query: 331 EALK-VSAGNVPGTD---LGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK 379
EA++ V GN + +GP+I+ A ER+ + V+EGA + G+ ++
Sbjct: 307 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE 359
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 188/359 (52%), Gaps = 13/359 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSI 88
+L+I G+FV+++ + + NP V+ +V A ++++ AVA+AK+A+E W K +
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQG 147
R ++L+RL ++++ + ++LA + G A + V +Q +QG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 148 ETL----AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
T+ A +++ + + + P+GV + P+N+P M+ W +A GNT VIKP++
Sbjct: 158 ATIPINQARPNRNLTL-TKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER 262
P + ++ +AG P GVVN++ G+ V + DHPD+R I F GS + GK+I +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 263 GA-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
A N K+V +G K+ +I +D + + + + + F G+ C+A +FV E++
Sbjct: 277 CALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR-LFVEESIH 335
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
+++ ++ + E +K+ T+ GP +++ Q GV EGATL+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV 394
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 170/353 (48%), Gaps = 7/353 (1%)
Query: 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITR 91
+YIDG+FV + WID+ NPAT V++R+P + A+ +A++A W I R
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIER 68
Query: 92 QQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA 151
L ++ I+ +++ I EE GK AE +V ++ +GE +
Sbjct: 69 ASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQ 128
Query: 152 GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211
+I ++ LGVT GI P+NFP + A+ GNT VIKPSE P +
Sbjct: 129 SDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAF 188
Query: 212 VDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
++ + G P GV N++ G + V + +P + +S GS AG+ I AKN +V
Sbjct: 189 AKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKV 248
Query: 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRA 330
+G K ++M DA+ + +V + +GQ C V +V + + + + +
Sbjct: 249 CLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERV-YVQKGI-YDQFVNRLG 306
Query: 331 EALK-VSAGNVPGTD---LGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK 379
EA++ V GN + +GP+I+ A ER+ + V+EGA + G+ ++
Sbjct: 307 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE 359
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 182/371 (49%), Gaps = 9/371 (2%)
Query: 14 PSHMKTFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAV 73
P MK +RH A YI G++ + + ++ +PAT E + VPK AE A+
Sbjct: 2 PGSMKD-PSLLRHQA----YIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAI 56
Query: 74 ASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQ 133
+A+ A+ W + R +L R +++ AN LA +T EQGK LA+A+G++
Sbjct: 57 EAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAAS 116
Query: 134 VVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACG 193
+E + G+TL + I + P+GV A ITP+NFPA + A+A G
Sbjct: 117 FIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAG 176
Query: 194 NTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNF-ICDHPDIRAISFVGS 252
V+KP+E P + + + + +AG P GV++V+ G A+ I +P +R +SF GS
Sbjct: 177 CPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGS 236
Query: 253 DQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALST 312
G+ + + A K++ +G ++ DA+ + + + + GQ C+ +
Sbjct: 237 TAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVC-TN 295
Query: 313 VIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGAT 370
FV E V + +L LKV G G LGP+I+ A +++ S I + +GA+
Sbjct: 296 RFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGAS 355
Query: 371 LLLDGRNLKVG 381
L+ G+ +G
Sbjct: 356 LMTGGKRHALG 366
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 172/350 (49%), Gaps = 19/350 (5%)
Query: 32 LYIDGKFV--ESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSI 88
L I+G+ V E K W NPA +++V V KA E A+ SA +A++TW +
Sbjct: 40 LIINGERVTTEDKIQSW----NPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNP 95
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCC-SIPTIMQG 147
R +L + II+ + + + E GK +A+ D + +E + + +G
Sbjct: 96 EERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRG 155
Query: 148 ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGA 207
+ + + + + Y P+GVT I+P+NF I + I GNT V+KP+ P
Sbjct: 156 KEILSRPGEQNRYFY-TPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVV 214
Query: 208 CMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER---- 262
V++L AG P GV+N + G+ V +++ DHP I+F GS G +YER
Sbjct: 215 AAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVV 274
Query: 263 --GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV 320
G + KRV MG K+ V+ DA+ ++ +AFG +GQ+C A S + +
Sbjct: 275 RPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVY 334
Query: 321 EWLPELKKRAEALKVSAGNVPGTD--LGPVISPQAKERILSLIQSGVDEG 368
+ + E K A A ++ G+ D +GPVI +A E+I+S I+ G EG
Sbjct: 335 DEVLE-KTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG 383
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 181/367 (49%), Gaps = 15/367 (4%)
Query: 22 QFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE 81
+F RH LYI G++V++K + L+ A +EVV KA AE E+A+ +A KA++
Sbjct: 33 EFGRHYP---LYIGGEWVDTK-ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK 88
Query: 82 TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI 141
TW R ++L + +++ ++L + E GK +A DV + +E
Sbjct: 89 TWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARA 148
Query: 142 PTIMQGETLAGVA-KDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
+ + V D S+ VPLG I P+NFP I M +A GNT + KP
Sbjct: 149 ALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKP 208
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVN-FICDHPDIRAISFVGSDQAGKYI 259
+E + ++ +AG PPGVVN + G + V ++ +HP IR I+F GS + G I
Sbjct: 209 AEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI 268
Query: 260 YERGAKNG------KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTV 313
YE + KR G KN ++ A+ +V +A+G GQ+C A S +
Sbjct: 269 YEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRL 328
Query: 314 IFVGEAVE-WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
I A E L + KRAE L V DLGPV+S + + ++LS I+ G +EG L+
Sbjct: 329 ILTQGAYEPVLERVLKRAERLSVGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEG-QLV 386
Query: 373 LDGRNLK 379
L G+ L+
Sbjct: 387 LGGKRLE 393
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 171/348 (49%), Gaps = 15/348 (4%)
Query: 32 LYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
L IDG+ E++ + I NPA EVV V KAT E A+ +A KA+ETW T
Sbjct: 40 LVIDGERYETE--NKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFETWRYTDPEE 97
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCC-SIPTIMQGET 149
R VLFR ++ + + + +E GK +A+ D + +E + + +G+
Sbjct: 98 RAAVLFRAVAKVRRKKHEFSALLVKEAGKPWNEADADTAEAIDFMEYYARQMIELAKGKP 157
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ + + + Y P GVT I P+NF I I GNT V+KP+ P
Sbjct: 158 VNSREGERNQYVY-TPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAA 216
Query: 210 MLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAK--- 265
V++L ++G P GVVN + G+ V +++ DHP I+F GS + G I+ER AK
Sbjct: 217 KFVEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQP 276
Query: 266 ---NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-- 320
+ K+V + MG K+ V+ D + + +AFG AGQ+C A S + V E V
Sbjct: 277 GQTHLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAV-VHEKVYD 335
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEG 368
E L + + E+ KV + +GPVI + +I+ I+ G +EG
Sbjct: 336 EVLKRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEG 383
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 187/359 (52%), Gaps = 13/359 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSI 88
+L+I G+FV+++ + + NP V+ +V A ++++ AVA+AK+A+E W K +
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQG 147
R ++L+RL ++++ + ++LA + G A + V +Q +QG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 148 ETL----AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
T+ A +++ + + + P+GV + P+N+P M+ W +A GNT VIKP++
Sbjct: 158 ATIPINQARPNRNLTL-TKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER 262
P + ++ +AG P GVVN++ G+ V + DHPD+R I F GS + GK+I +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 263 GA-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
A N K+V +G K+ +I +D + + + + + F G+ +A +FV E++
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGR-LFVEESIH 335
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
+++ ++ + E +K+ T+ GP +++ Q GV EGATL+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV 394
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 187/359 (52%), Gaps = 13/359 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSI 88
+L+I G+FV+++ + + NP V+ +V A ++++ AVA+AK+A+E W K +
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQG 147
R ++L+RL ++++ + ++LA + G A + V +Q +QG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 148 ETL----AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
T+ A +++ + + + P+GV + P+N+P M+ W +A GNT VIKP++
Sbjct: 158 ATIPINQARPNRNLTL-TKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER 262
P + ++ +AG P GVVN++ G+ V + DHPD+R I F GS + GK+I +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 263 GA-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
A N K+V +G K+ +I +D + + + + + F G+ +A +FV E++
Sbjct: 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGR-LFVEESIH 335
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
+++ ++ + E +K+ T+ GP +++ Q GV EGATL+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV 394
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 181/367 (49%), Gaps = 15/367 (4%)
Query: 22 QFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE 81
+F RH LYI G++V++K + L+ A +EVV KA AE E+A+ +A KA++
Sbjct: 33 EFGRHYP---LYIGGEWVDTK-ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK 88
Query: 82 TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI 141
TW R ++L + +++ ++L + E GK +A DV + +E
Sbjct: 89 TWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARA 148
Query: 142 PTIMQGETLAGVA-KDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
+ + V D S+ VPLG I P+NFP I M +A GNT + KP
Sbjct: 149 ALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKP 208
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVN-FICDHPDIRAISFVGSDQAGKYI 259
+E + ++ +AG PPGVVN + G + V ++ +HP IR I+F GS + G I
Sbjct: 209 AEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI 268
Query: 260 YERGAKNG------KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTV 313
YE + KR G K+ ++ A+ +V +A+G GQ+C A S +
Sbjct: 269 YEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRL 328
Query: 314 IFVGEAVE-WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
I A E L + KRAE L V DLGPV+S + + ++LS I+ G +EG L+
Sbjct: 329 ILTQGAYEPVLERVLKRAERLSVGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEG-QLV 386
Query: 373 LDGRNLK 379
L G+ L+
Sbjct: 387 LGGKRLE 393
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 187/359 (52%), Gaps = 13/359 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSI 88
+L+I G+FV+++ + + NP V+ +V A ++++ AVA+AK+A+E W K +
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQG 147
R ++L+RL ++++ + ++LA + G A + V +Q +QG
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 148 ETL----AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
T+ A +++ + + + P+GV + P+N+P M+ W +A GNT VIKP++
Sbjct: 158 ATIPINQARPNRNLTL-TKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQV 216
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER 262
P + ++ +AG P GVVN++ G+ V + DHPD+R I F GS + GK+I +
Sbjct: 217 TPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276
Query: 263 GA-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV- 320
A N K+V +G K+ +I +D + + + + + F G+ +A +FV E++
Sbjct: 277 CALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGR-LFVEESIH 335
Query: 321 -EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
+++ ++ + E +K+ T+ GP +++ Q GV EGATL+ G +
Sbjct: 336 NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQV 394
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 184/417 (44%), Gaps = 43/417 (10%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE----- 81
I T +L+I+G + I + NPAT ++ +P AT +++ AVA+AK A
Sbjct: 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGA 64
Query: 82 TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI 141
W+ S R + L + + +LA+ + + GK L +A D+ E +
Sbjct: 65 DWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADL 124
Query: 142 PTIMQGETLAGVAKDMDI---HSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVI 198
+ A V+ MD H R P+GV ITP+N+P ++ W A+A G ++
Sbjct: 125 AEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAIL 184
Query: 199 KPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGK 257
KPSE C+ L ++ + G PPGV+N++ G +A + HPD+ ++F GS G
Sbjct: 185 KPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244
Query: 258 YIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVG 317
I A+ K V +G K+ V+ D + + F GQ C A S +I
Sbjct: 245 KIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHE 304
Query: 318 E-AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
A E+L + K + +K+S G LGPV+S E+IL + + EGAT+L
Sbjct: 305 SIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTG-- 362
Query: 377 NLKVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFY----FYTETKTVTQLWRE 429
GSR L K+GF+ T+ T Q+WRE
Sbjct: 363 --------------------GSRPEHL-------KKGFFIEPTIITDVTTNMQIWRE 392
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 172/352 (48%), Gaps = 14/352 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
K Y++G++ S+ + I ++ PA+ + VP + E++ ASAKKA W S I
Sbjct: 6 KNYVNGEWKLSE--NEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIE 63
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL 150
R L ++ +I+ + +++ +++E K A +V+R +++ M+GE L
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 151 AG-----VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
G +K R P+G+ I+PFN+P + A+ GN KP +
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGA 264
+ ++L + +AG P GV N I G + ++I +H + I+F GS G+ I G
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI---GK 240
Query: 265 KNGKR-VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWL 323
G R + +G K+ +++ DA+ T ++ AFG +GQRC A+ V+ + + L
Sbjct: 241 MAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 300
Query: 324 PELKKRAEALKVSAGN-VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLD 374
E K R + L ++ GN D+ P+I ++ + + LI D+GAT L +
Sbjct: 301 VE-KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTE 351
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 172/352 (48%), Gaps = 14/352 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
K Y++G++ S+ + I ++ PA+ + VP + E++ ASAKKA W S I
Sbjct: 6 KNYVNGEWKLSE--NEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIE 63
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL 150
R L ++ +I+ + +++ +++E K A +V+R +++ M+GE L
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 151 AG-----VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
G +K R P+G+ I+PFN+P + A+ GN KP +
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGA 264
+ ++L + +AG P GV N I G + ++I +H + I+F GS G+ I G
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERI---GK 240
Query: 265 KNGKR-VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWL 323
G R + +G K+ +++ DA+ T ++ AFG +GQRC A+ V+ + + L
Sbjct: 241 MAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 300
Query: 324 PELKKRAEALKVSAGN-VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLD 374
E K R + L ++ GN D+ P+I ++ + + LI D+GAT L +
Sbjct: 301 VE-KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTE 351
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 172/352 (48%), Gaps = 14/352 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
K Y++G++ S+ + I ++ PA+ + VP + E++ ASAKKA W S I
Sbjct: 6 KNYVNGEWKLSE--NEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIE 63
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL 150
R L ++ +I+ + +++ +++E K A +V+R +++ M+GE L
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 151 AG-----VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
G +K R P+G+ I+PFN+P + A+ GN KP +
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGA 264
+ ++L + +AG P GV N I G + ++I +H + I+F GS G+ I G
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI---GK 240
Query: 265 KNGKR-VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWL 323
G R + +G K+ +++ DA+ T ++ AFG +GQRC A+ V+ + + L
Sbjct: 241 MAGMRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 300
Query: 324 PELKKRAEALKVSAGN-VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLD 374
E K R + L ++ GN D+ P+I ++ + + LI D+GAT L +
Sbjct: 301 VE-KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTE 351
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 175/369 (47%), Gaps = 12/369 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
T ++ G+++ + AT + +PA+ + V E +AV +A +A+ W + S
Sbjct: 13 TDSFVGGRWLPAAAT--FPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAK 70
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R +L + N++ N LA IT E GK L +A G++L +E + G+
Sbjct: 71 ERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDI 130
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ AKD + P+GV A ITP+NFP+ + A+A G T V+KP+E P + +
Sbjct: 131 IHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSAL 190
Query: 210 MLVDMLTQAGCPPGVVNVI----HGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265
L ++ +QAG P GV NVI A + IC P + ISF GS GK + A
Sbjct: 191 ALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN 250
Query: 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPE 325
+ KRV +G ++ AN + + + F GQ C+ S V +
Sbjct: 251 SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVC-SNQFLVQRGIH-DAF 308
Query: 326 LKKRAEALK----VSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+K AEA+K V G GT GP+I+ +A E++ + V +GAT++ G+ ++G
Sbjct: 309 VKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLG 368
Query: 382 INVPIPVPL 390
N P L
Sbjct: 369 KNFFEPTLL 377
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 180/367 (49%), Gaps = 15/367 (4%)
Query: 22 QFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE 81
+F RH LYI G++V++K + L+ A +EVV KA AE E+A+ +A KA++
Sbjct: 33 EFGRHYP---LYIGGEWVDTK-ERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK 88
Query: 82 TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI 141
TW R ++L + +++ ++L + E GK +A DV + +E
Sbjct: 89 TWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARA 148
Query: 142 PTIMQGETLAGVA-KDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
+ + V D S+ VPLG I P+NFP I M +A GNT + KP
Sbjct: 149 ALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKP 208
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVN-FICDHPDIRAISFVGSDQAGKYI 259
+E + ++ +AG PPGVVN + G + V ++ +HP IR I+F GS + G I
Sbjct: 209 AEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI 268
Query: 260 YERGAKNG------KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTV 313
YE + KR G K+ ++ A+ +V +A+G GQ+ A S +
Sbjct: 269 YEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASRL 328
Query: 314 IFVGEAVE-WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
I A E L + KRAE L V DLGPV+S + + ++LS I+ G +EG L+
Sbjct: 329 ILTQGAYEPVLERVLKRAERLSVGPAE-ENPDLGPVVSAEQERKVLSYIEIGKNEG-QLV 386
Query: 373 LDGRNLK 379
L G+ L+
Sbjct: 387 LGGKRLE 393
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 20/363 (5%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++
Sbjct: 16 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 75
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI- 141
W + R ++L RL ++I+ + LA T + GK + L L +V +C
Sbjct: 76 WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS---YLVDLDMVLKCLRYY 132
Query: 142 ---PTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTH 196
G+T + D D SY P+GV I P+NFP ++ W A+A GN
Sbjct: 133 AGWADKYHGKT---IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 197 VIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQA 255
V+K +E+ P + + +++ +AG PPGVVN++ G A I H D+ ++F GS +
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 256 GKYI-YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G+ I G+ N KRV +G K+ +IMSDA+ + Q A F GQ C A S
Sbjct: 250 GRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRT- 308
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
FV E + E++ RA++ V T+ GP + ++IL I +G EGA LL
Sbjct: 309 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 368
Query: 373 LDG 375
G
Sbjct: 369 CGG 371
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 171/352 (48%), Gaps = 14/352 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
K Y++G++ S+ + I ++ PA+ + VP + E++ ASAKKA W S I
Sbjct: 6 KNYVNGEWKLSE--NEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIE 63
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL 150
R L ++ +I+ + +++ +++E K A +V+R +++ M+GE L
Sbjct: 64 RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVL 123
Query: 151 AG-----VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205
G +K R P+G+ I+PFN+P + A+ GN KP +
Sbjct: 124 EGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGS 183
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGA 264
+ ++L + +AG P GV N I G + ++I +H + I+F GS G+ I G
Sbjct: 184 ISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI---GK 240
Query: 265 KNGKR-VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWL 323
G R + +G K+ +++ DA+ T ++ AFG +GQR A+ V+ + + L
Sbjct: 241 MAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADEL 300
Query: 324 PELKKRAEALKVSAGN-VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLD 374
E K R + L ++ GN D+ P+I ++ + + LI D+GAT L +
Sbjct: 301 VE-KIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTE 351
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 20/363 (5%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++
Sbjct: 10 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 69
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI- 141
W + R ++L RL ++I+ + LA T + GK + L L +V +C
Sbjct: 70 WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS---YLVDLDMVLKCLRYY 126
Query: 142 ---PTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTH 196
G+T + D D SY P+GV I P+NFP ++ W A+A GN
Sbjct: 127 AGWADKYHGKT---IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 183
Query: 197 VIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQA 255
V+K +E+ P + + +++ +AG PPGVVN++ G A I H D+ ++F GS +
Sbjct: 184 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 243
Query: 256 GKYI-YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G+ I G+ N KRV +G K+ +IMSDA+ + Q A F GQ C A S
Sbjct: 244 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRT- 302
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
FV E + E++ RA++ V T+ GP + ++IL I +G EGA LL
Sbjct: 303 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 362
Query: 373 LDG 375
G
Sbjct: 363 CGG 365
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 20/363 (5%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++
Sbjct: 16 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 75
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI- 141
W + R ++L RL ++I+ + LA T + GK + L L +V +C
Sbjct: 76 WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS---YLVDLDMVLKCLRYY 132
Query: 142 ---PTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTH 196
G+T + D D SY P+GV I P+NFP ++ W A+A GN
Sbjct: 133 AGWADKYHGKT---IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 197 VIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQA 255
V+K +E+ P + + +++ +AG PPGVVN++ G A I H D+ ++F GS +
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 256 GKYI-YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G+ I G+ N KRV +G K+ +IMSDA+ + Q A F GQ C A S
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRT- 308
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
FV E + E++ RA++ V T+ GP + ++IL I +G EGA LL
Sbjct: 309 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 368
Query: 373 LDG 375
G
Sbjct: 369 CGG 371
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 20/363 (5%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++
Sbjct: 16 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 75
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI- 141
W + R ++L RL ++I+ + LA T + GK + L L +V +C
Sbjct: 76 WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS---YLVDLDMVLKCLRYY 132
Query: 142 ---PTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTH 196
G+T + D D SY P+GV I P+NFP ++ W A+A GN
Sbjct: 133 AGWADKYHGKT---IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 197 VIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQA 255
V+K +E+ P + + +++ +AG PPGVVN++ G A I H D+ ++F GS +
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 256 GKYI-YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G+ I G+ N KRV +G K+ +IMSDA+ + Q A F GQ C A S
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRT- 308
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
FV E + E++ RA++ V T+ GP + ++IL I +G EGA LL
Sbjct: 309 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 368
Query: 373 LDG 375
G
Sbjct: 369 CGG 371
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 20/363 (5%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++
Sbjct: 16 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 75
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI- 141
W + R ++L RL ++I+ + LA T + GK + L L +V +C
Sbjct: 76 WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS---YLVDLDMVLKCLRYY 132
Query: 142 ---PTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTH 196
G+T + D D SY P+GV I P+NFP ++ W A+A GN
Sbjct: 133 AGWADKYHGKT---IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 197 VIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQA 255
V+K +E+ P + + +++ +AG PPGVVN++ G A I H D+ ++F GS +
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEI 249
Query: 256 GKYI-YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G+ I G+ N KRV +G K+ +IMSDA+ + Q A F GQ C A S
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRT- 308
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
FV E + E++ RA++ V T+ GP + ++IL I +G EGA LL
Sbjct: 309 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 368
Query: 373 LDG 375
G
Sbjct: 369 CGG 371
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 178/363 (49%), Gaps = 20/363 (5%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++
Sbjct: 16 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 75
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI- 141
W + R ++L RL ++I+ + LA T + GK + L L +V +C
Sbjct: 76 WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS---YLVDLDMVLKCLRYY 132
Query: 142 ---PTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTH 196
G+T + D D SY P+GV I P+NFP ++ W A+A GN
Sbjct: 133 AGWADKYHGKT---IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 197 VIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQA 255
V+K +E+ P + + +++ +AG PPGVVN++ G A I H D+ ++F GS +
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 256 GKYI-YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G+ I G+ N KRV +G K+ +IMSDA+ + Q A F GQ C A S
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRT- 308
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
FV E + E++ RA++ V T+ GP + ++IL I +G EGA LL
Sbjct: 309 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 368
Query: 373 LDG 375
G
Sbjct: 369 CGG 371
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 174/369 (47%), Gaps = 12/369 (3%)
Query: 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSII 89
T ++ G+++ + AT + +PA+ + V E +AV +A +A+ W + S
Sbjct: 13 TDSFVGGRWLPAAAT--FPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAK 70
Query: 90 TRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGET 149
R +L + N++ N LA IT E GK L +A G++L +E + G+
Sbjct: 71 ERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDI 130
Query: 150 LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACM 209
+ AKD + P+GV A ITP+NFP+ + A+A G T V+KP+E P + +
Sbjct: 131 IHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSAL 190
Query: 210 MLVDMLTQAGCPPGVVNVI----HGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265
L ++ +QAG P GV NVI A + IC P + ISF GS GK + A
Sbjct: 191 ALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAAN 250
Query: 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPE 325
+ KRV +G ++ AN + + + F GQ + S V +
Sbjct: 251 SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVC-SNQFLVQRGIH-DAF 308
Query: 326 LKKRAEALK----VSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+K AEA+K V G GT GP+I+ +A E++ + V +GAT++ G+ ++G
Sbjct: 309 VKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLG 368
Query: 382 INVPIPVPL 390
N P L
Sbjct: 369 KNFFEPTLL 377
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 177/363 (48%), Gaps = 20/363 (5%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++
Sbjct: 16 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 75
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI- 141
W + R ++L RL ++I+ + LA T + GK + L L +V +C
Sbjct: 76 WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS---YLVDLDMVLKCLRYY 132
Query: 142 ---PTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTH 196
G+T + D D SY P+GV I P+NFP ++ W A+A GN
Sbjct: 133 AGWADKYHGKT---IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 197 VIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQA 255
V+K +E+ P + + +++ +AG PPGVVN++ G A I H D+ ++F GS +
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 256 GKYI-YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G+ I G+ N KRV +G K+ +IMSDA+ + Q A F GQ C +
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CXCAGSRT 308
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
FV E + E++ RA++ V T+ GP + ++IL I +G EGA LL
Sbjct: 309 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 368
Query: 373 LDG 375
G
Sbjct: 369 CGG 371
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 177/363 (48%), Gaps = 20/363 (5%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +++I+ ++ ++ + NP+T +V+ V + A+++ AV +A+ A++
Sbjct: 15 EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 74
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI- 141
W + R ++L RL ++I+ + LA T + GK + L L +V +C
Sbjct: 75 WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIIS---YLVDLDMVLKCLRYY 131
Query: 142 ---PTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTH 196
G+T + D D SY P+GV I P+NFP ++ W A+A GN
Sbjct: 132 AGWADKYHGKT---IPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 188
Query: 197 VIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQA 255
V+K +E+ P + + +++ +AG PPGVVNVI G A I H D+ ++F GS +
Sbjct: 189 VMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEV 248
Query: 256 GKYI-YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G I G N KRV +G K+ +IMSDA+ + Q A F GQ C A S
Sbjct: 249 GHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRT- 307
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
FV E + E++ RA++ V T+ GP + +++L I+SG +EG LL
Sbjct: 308 FVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLL 367
Query: 373 LDG 375
G
Sbjct: 368 CGG 370
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 177/363 (48%), Gaps = 20/363 (5%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++
Sbjct: 16 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 75
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI- 141
W + R ++L RL ++I+ + LA T + GK + L L +V +C
Sbjct: 76 WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS---YLVDLDMVLKCLRYY 132
Query: 142 ---PTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTH 196
G+T + D D SY P+GV I P+NFP ++ W A+A GN
Sbjct: 133 AGWADKYHGKT---IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 197 VIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQA 255
V+K +E+ P + + +++ +AG PPGVVN++ G A I H D+ ++F GS +
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 256 GKYI-YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G+ I G+ N KRV +G K+ +IMSDA+ + Q A F GQ C +
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CSCAGSRT 308
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
FV E + E++ RA++ V T+ GP + ++IL I +G EGA LL
Sbjct: 309 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 368
Query: 373 LDG 375
G
Sbjct: 369 CGG 371
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 177/363 (48%), Gaps = 20/363 (5%)
Query: 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--- 82
+ +++I+ ++ ++ + NP+T EV+ +V + +++ AV +A+ A++
Sbjct: 16 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 75
Query: 83 WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI- 141
W + R ++L RL ++I+ + LA T + GK + L L +V +C
Sbjct: 76 WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS---YLVDLDMVLKCLRYY 132
Query: 142 ---PTIMQGETLAGVAKDMDIHSY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTH 196
G+T + D D SY P+GV I P+NFP ++ W A+A GN
Sbjct: 133 AGWADKYHGKT---IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 189
Query: 197 VIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQA 255
V+K +E+ P + + +++ +AG PPGVVN++ G A I H D+ ++F GS +
Sbjct: 190 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 249
Query: 256 GKYI-YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVI 314
G+ I G+ N KRV +G K+ +IMSDA+ + Q A F GQ C +
Sbjct: 250 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ-CSCAGSRT 308
Query: 315 FVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
FV E + E++ RA++ V T+ GP + ++IL I +G EGA LL
Sbjct: 309 FVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLL 368
Query: 373 LDG 375
G
Sbjct: 369 CGG 371
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 14/347 (4%)
Query: 35 DGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQV 94
+G++VES+ + I + PA+ + +P + E+ A+ AK A + W I R +
Sbjct: 17 NGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDL 76
Query: 95 LFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL---- 150
L+ ++++ + + E I E K A G+V R ++ + GETL
Sbjct: 77 LYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQ 136
Query: 151 --AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGAC 208
G +K + + R PLGV I+PFN+P + A+ GNT V KP+ + +
Sbjct: 137 FKGGSSKKIALVE-REPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSG 195
Query: 209 MMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267
+ +V+ L AG P G++ V+ G + + + +HP I I+F G G+ I E+
Sbjct: 196 IKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAKM-- 253
Query: 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPE 325
V +G K+ +++ DA+ T +Q+V AF +GQRC A+ V FV ++V + +
Sbjct: 254 IPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRV-FVQDSVADQLVAN 312
Query: 326 LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLL 372
+K+ E L V + D+ PVI ++ I LI ++ GATLL
Sbjct: 313 IKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLL 358
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 170/358 (47%), Gaps = 4/358 (1%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
YI G++ +S D++NPAT V+ +VP ++ +AV + + A + I TR+
Sbjct: 15 YIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIETRR 74
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAG 152
+ L +++ +K N +++ + E GK +A+G+V + C + + T+
Sbjct: 75 KWLEDIRDGLKENREEIGRILCXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPE 134
Query: 153 VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLV 212
KD + P+GVT I P+NFP A+A G VIKP+ P +
Sbjct: 135 KPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXIAFF 194
Query: 213 DMLTQAGCPPGVVNVIHGAHDAVN-FICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQ 271
+ + P G VN++ G + +C+H D+ +SF GS + G+ + A+ K++
Sbjct: 195 SVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAEQVKKLA 254
Query: 272 SNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKR 329
+G ++ DA+ + L+ F GQ C+ + IFV E V + +L +R
Sbjct: 255 LELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVC-ANRIFVHEKVADAFGQKLAER 313
Query: 330 AEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVGINVPIP 387
V G G D+GP+I+ Q +++ +Q +D+GA+L+ + ++G + P
Sbjct: 314 VNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFP 371
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 179/363 (49%), Gaps = 11/363 (3%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
K +I+GK+ ++ D+ NP V+T AT ++E A A+KA + W+K++
Sbjct: 8 KSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTED 67
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL 150
R+ VL + + + N + I E G T+ + ++ + + ++++ + + G +
Sbjct: 68 RKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGG--V 125
Query: 151 AGVAKDMDIHS---YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS-ERDPG 206
V D++ + YR+PLGV + I+PFNFP + + AIA GN+ V KP +
Sbjct: 126 KEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAIS 185
Query: 207 ACMMLVDMLTQAGCPPGVVNV-IHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265
++ AG P GV+NV + + + + +P R ISF GS G++I E +
Sbjct: 186 GGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR 245
Query: 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-EWLP 324
KR+ +G N ++SDA+ ++ + F GQ CM ++ +I + E++
Sbjct: 246 AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVE 305
Query: 325 ELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVGINV 384
+ R + L P T +GP+I+ + E+ L +I+ +G L ++G+ +VG NV
Sbjct: 306 KFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK--RVG-NV 362
Query: 385 PIP 387
P
Sbjct: 363 LTP 365
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 175/369 (47%), Gaps = 11/369 (2%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY--ETWS 84
I +LYI G++ E + I + NPAT E++ +P AT +++ AV +A+KA + W
Sbjct: 21 IPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWG 80
Query: 85 KTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTI 144
T+ R + L + + LA + + GKTL ++ D+ E +
Sbjct: 81 STTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEA 140
Query: 145 MQGETLAGVAKDMDIH-SY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 201
+ + V + D + SY R PLGV ITP+N+P ++ +W A+A G ++KPS
Sbjct: 141 LDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPS 200
Query: 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIY 260
E C+ L ++ + G P G +N++ G +A + HP + ISF GS G I
Sbjct: 201 ELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIM 260
Query: 261 ERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQL-VGAAFGAAGQRCMALSTVIFVGE- 318
A+ K V +G K+ V+ D + + + + F GQ C A S +I
Sbjct: 261 TAAAQLVKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENI 320
Query: 319 AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG--- 375
A ++ L K + +K+S LGPV+S E++L I + EGAT+L G
Sbjct: 321 ASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERP 380
Query: 376 RNLKVGINV 384
++LK G V
Sbjct: 381 QHLKKGYYV 389
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 175/369 (47%), Gaps = 11/369 (2%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY--ETWS 84
I +LYI G++ E + I + NPAT E++ +P AT +++ AV +A+KA + W
Sbjct: 21 IPRRQLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWG 80
Query: 85 KTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTI 144
T+ R + L + + LA + + GKTL ++ D+ E +
Sbjct: 81 STTGAQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGCFEYYAGLAEA 140
Query: 145 MQGETLAGVAKDMDIH-SY--RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 201
+ + V + D + SY R PLGV ITP+N+P ++ +W A+A G ++KPS
Sbjct: 141 LDSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPS 200
Query: 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIY 260
E C+ L ++ + G P G +N++ G +A + HP + ISF GS G I
Sbjct: 201 ELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIM 260
Query: 261 ERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQL-VGAAFGAAGQRCMALSTVIFVGE- 318
A+ K V +G K+ V+ D + + + + F GQ C A S +I
Sbjct: 261 TAAAQLVKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENI 320
Query: 319 AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG--- 375
A ++ L K + +K+S LGPV+S E++L I + EGAT+L G
Sbjct: 321 ASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERP 380
Query: 376 RNLKVGINV 384
++LK G V
Sbjct: 381 QHLKKGYYV 389
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/366 (31%), Positives = 168/366 (45%), Gaps = 19/366 (5%)
Query: 23 FIRHIA--------TTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAV 73
F +HIA T L+I+GK E + D I NP +EV+ ++ +A E+ A+
Sbjct: 517 FPKHIAQVRTQLGKTYPLFINGK--EVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAI 574
Query: 74 ASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQ 133
A+AK A+ W T TR + L + + + +L+ E GK A DV +
Sbjct: 575 AAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAID 634
Query: 134 VVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACG 193
+E + G A H + P GV A I P+NFP I + M AI G
Sbjct: 635 FLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTG 694
Query: 194 NTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGS 252
N V KPS LV++ +AG P GV N G + +++ DHPDI I+F GS
Sbjct: 695 NCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGS 754
Query: 253 DQAGKYIYERGAK------NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQR 306
+ G I ER AK N K++ S MG KN +I DA+ + ++ +AFG GQ+
Sbjct: 755 METGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQK 814
Query: 307 CMALSTVIFVGEAVE-WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGV 365
C A S VI + + ++ L A+A KV P +G V +A + I + G
Sbjct: 815 CSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGK 874
Query: 366 DEGATL 371
EG L
Sbjct: 875 REGHVL 880
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 182/361 (50%), Gaps = 7/361 (1%)
Query: 24 IRHIATTKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYET 82
+R + + +DGK V++ + ID +P EVV P+A+ ++ AVA+A+KA++
Sbjct: 17 LRIKSRYQXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDA 76
Query: 83 --WSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS 140
W + S R ++ F++ ++I A ++LA + E GK +A A G++ +
Sbjct: 77 GPWPRXSGAERSRLXFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAG 136
Query: 141 IPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200
++G+T + D R P+GV ITP+NFP +I P AI G T V+KP
Sbjct: 137 QARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKP 196
Query: 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHGAHD-AVNFICDHPDIRAISFVGSDQAGKYI 259
SE G + L ++ +AG P GV NV+ G D A + + P++ ++F GS + G +
Sbjct: 197 SEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKL 256
Query: 260 YERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEA 319
E A+ KRV +G K ++ +DA+ + + + AGQ C++ S ++ V E
Sbjct: 257 GEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLL-VQEG 315
Query: 320 VEWLPELKKRAEALKVSAGNVPG--TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN 377
+ + + KV+ G+ T +G IS E++ S + +G+ GA LLL G
Sbjct: 316 IRDALXERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGER 375
Query: 378 L 378
+
Sbjct: 376 I 376
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 167/360 (46%), Gaps = 17/360 (4%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIIT 90
KL I+G+ V + ++NPAT +V+ + +A+ ++++AV +A A+ W +T+
Sbjct: 25 KLLINGELVSGEGEKQ-PVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKV 83
Query: 91 RQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGD-------VLRGLQVVEQCCSIPT 143
R + L +L ++I+ N + AE + GK L A D V R +C +
Sbjct: 84 RAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN--G 141
Query: 144 IMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203
+ GE L G + R PLGV A I P+N+P M+ W A+A GN V+KPSE
Sbjct: 142 LAAGEYLEGHTSMIR----RDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEI 197
Query: 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYER 262
P + L + L + P GVVN++ G V + + HP +R +S GS G++I
Sbjct: 198 TPLTALKLAE-LAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISH 256
Query: 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEW 322
A + KR +G K ++ DA+ + + + AGQ C A + +
Sbjct: 257 TASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDT 316
Query: 323 LPE-LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
L E L LK A + T+LGP+ S ER+ ++ G ++ G + G
Sbjct: 317 LVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 376
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 160/361 (44%), Gaps = 19/361 (5%)
Query: 17 MKTFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASA 76
+ T + + T+L I +F E+ + NP T + + +A+ A++++AV +A
Sbjct: 13 LGTENLYFQSXXDTQLLIGSRF-EAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAA 71
Query: 77 KKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVE 136
++A+ WS+T+ R L ++ + I+ + A GK + + D L +
Sbjct: 72 ERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDEL---PAII 128
Query: 137 QCC--------SIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188
C ++ GE L G + R P+G+ I P+N+P W
Sbjct: 129 DCWRFFAGAVRNLHAPAAGEYLPGHTSXI----RRDPIGIVGSIAPWNYPLXXXAWKLAP 184
Query: 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAI 247
AI GNT V KPSE+ P + L ++ P GVVNVI G + V N + +HP + +
Sbjct: 185 AIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGXV 243
Query: 248 SFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRC 307
S G GK + AK KR +G K ++ DA+ +N + + AGQ C
Sbjct: 244 SITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDC 303
Query: 308 MALSTVIFVGEAVEWL-PELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVD 366
A + E L +L ++ + + ++GP+IS + ++R+ S ++ D
Sbjct: 304 TAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAAD 363
Query: 367 E 367
+
Sbjct: 364 Q 364
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 167/355 (47%), Gaps = 7/355 (1%)
Query: 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKT 86
I TK I G++VE + NP + V+ +A+ A++++A +AKKA W+ T
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAAT 69
Query: 87 SIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQ 146
R +++R +++ + +++ E + +E G T + A ++ + ++ S P +
Sbjct: 70 PAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVH 129
Query: 147 GETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP- 205
G + YRV GV I+P+NFP + + A+A GN VIKP+ P
Sbjct: 130 GRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPV 189
Query: 206 GACMMLVDMLTQAGCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGA 264
++ + +AG P GV++ + GA + + H + ISF GS G+ + E
Sbjct: 190 TGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAI 249
Query: 265 KNG--KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-- 320
G K V +G V+++DA+ AF GQ CM+++ VI V AV
Sbjct: 250 NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVI-VDAAVHD 308
Query: 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
E+L + + + + + GT +GPVI+ + I+ EGAT+ ++G
Sbjct: 309 EFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEG 363
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 145/311 (46%), Gaps = 25/311 (8%)
Query: 83 WSKTSI--ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV---LRGLQVVEQ 137
WS + R VL + +II+ N+ AE + GK + A G+V + L++ E
Sbjct: 69 WSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAEL 128
Query: 138 CCS------IPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIA 191
IP +TL + + R PLGV A ITPFN+P + +
Sbjct: 129 DLKKIGGDYIPGDWTYDTL-----ETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFI 183
Query: 192 CGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVG 251
GN V+KPS DP M V L AG PP + +++ I + A+SF G
Sbjct: 184 YGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG 243
Query: 252 SDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALS 311
S + G+ + + G K+ +G + +++ DA+ +++ + AGQRC A+
Sbjct: 244 STEVGERVVKVGGV--KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIK 301
Query: 312 TVI----FVGEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDE 367
V+ G+ VE E+ KR +L+V P D+GP+ISP A + +++ I+ V++
Sbjct: 302 LVLAERPVYGKLVE---EVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 358
Query: 368 GATLLLDGRNL 378
G +L GR L
Sbjct: 359 GGRVLAGGRRL 369
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 145/311 (46%), Gaps = 25/311 (8%)
Query: 83 WSKTSI--ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV---LRGLQVVEQ 137
WS + R VL + +II+ N+ AE + GK + A G+V + L++ E
Sbjct: 69 WSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAEL 128
Query: 138 CCS------IPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIA 191
IP +TL + + R PLGV A ITPFN+P + +
Sbjct: 129 DLKKIGGDYIPGDWTYDTL-----ETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFI 183
Query: 192 CGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVG 251
GN V+KPS DP M V L AG PP + +++ I + A+SF G
Sbjct: 184 YGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG 243
Query: 252 SDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALS 311
S + G+ + + G K+ +G + +++ DA+ +++ + AGQRC A+
Sbjct: 244 STEVGERVVKVGGV--KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIK 301
Query: 312 TVI----FVGEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDE 367
V+ G+ VE E+ KR +L+V P D+GP+ISP A + +++ I+ V++
Sbjct: 302 LVLAERPVYGKLVE---EVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 358
Query: 368 GATLLLDGRNL 378
G +L GR L
Sbjct: 359 GGRVLAGGRRL 369
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 145/311 (46%), Gaps = 25/311 (8%)
Query: 83 WSKTSI--ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDV---LRGLQVVEQ 137
WS + R VL + +II+ N+ AE + GK + A G+V + L++ E
Sbjct: 69 WSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAEL 128
Query: 138 CCS------IPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIA 191
IP +TL + + R PLGV A ITPFN+P + +
Sbjct: 129 DLKKIGGDYIPGDWTYDTL-----ETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFI 183
Query: 192 CGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVG 251
GN V+KPS DP M V L AG PP + +++ I + A+SF G
Sbjct: 184 YGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG 243
Query: 252 SDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALS 311
S + G+ + + G K+ +G + +++ DA+ +++ + AGQRC A+
Sbjct: 244 STEVGERVVKVGGV--KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIK 301
Query: 312 TVI----FVGEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDE 367
V+ G+ VE E+ KR +L+V P D+GP+ISP A + +++ I+ V++
Sbjct: 302 LVLAERPVYGKLVE---EVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEK 358
Query: 368 GATLLLDGRNL 378
G +L GR L
Sbjct: 359 GGRVLAGGRRL 369
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 163/355 (45%), Gaps = 10/355 (2%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE-----TWSK 85
+L++DG++ + + NP T + +P T ++++AVA+A+ A + W++
Sbjct: 26 QLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGRDWAR 85
Query: 86 TSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM 145
R + L + + +LA+ + GK +A D+ E +
Sbjct: 86 APGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQAEAL 145
Query: 146 QGETLAGVAKDMD---IHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSE 202
+ V+ M+ H R P+GV ITP+N+P ++ W A+A G T V+KPSE
Sbjct: 146 DKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSE 205
Query: 203 RDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYE 261
C+ L D+ + G P GV+N++ G DA + HPD+ ++F GS + GK I
Sbjct: 206 LASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIMA 265
Query: 262 RGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVE 321
A K V +G K+ V+ D + + + F GQ C A S ++ + +
Sbjct: 266 SAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTKIAK 325
Query: 322 WLPE-LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
E + A+ +KVS G LGPV+S E+I I + +GAT+L G
Sbjct: 326 KFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG 380
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 9/337 (2%)
Query: 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106
I + PA NE + RV +AT AE E V ++A++ W+ R +++ ++ + ++ +
Sbjct: 37 ITSYCPANNEPIARVTQATLAEYEETVQKTREAWKMWADIPAPKRGEIVRQIGDALRKKI 96
Query: 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPL 166
K L ++ E GK + G+V + V + + ++ G L + P+
Sbjct: 97 KVLGSLVSLEMGKIYVEGVGEVQEYVDVCDYAVGLSRMIGGPVLPSERPGHALIEQWNPV 156
Query: 167 GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP----GACMMLVDMLTQAGCPP 222
G+ IT FNFP + W +A+ CGN + K + P ++ ++L Q P
Sbjct: 157 GLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPG 216
Query: 223 GVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVI 282
+ ++ G D + + +SF GS GK + + R +G N ++
Sbjct: 217 AICSMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKLLELGGNNAIIV 276
Query: 283 MSDANRSNTLNQLVGAAFGAAGQRCMALSTVIF---VGEAVEWLPELKKRAEALKVSAGN 339
DA+ + + V A+ G AGQRC ++ V +AV + + K + +++
Sbjct: 277 FEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAV--VERIAKAYKQVRIGDPW 334
Query: 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
P T GP+ + QA ++ L+ I+ +G TL+ G+
Sbjct: 335 DPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGK 371
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 154/336 (45%), Gaps = 16/336 (4%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NPAT + + P A E+E A++ A ++ W TS+ R Q L + ++A+ ++ A
Sbjct: 13 NPATGQTLAAXPWANAQEIEHALSLAASGFKKWKXTSVAQRAQTLRDIGQALRAHAEEXA 72
Query: 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSI-PTIMQGE-TLAGVAKDMDIHSYRVPLGV 168
+ IT E GK + A +V + + + P + E TL V + YR PLGV
Sbjct: 73 QCITREXGKPIKQARAEVTKSAALCDWYAEHGPAXLNPEPTL--VENQQAVIEYR-PLGV 129
Query: 169 TAGITPFNFPAMIPLWM-----FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPG 223
I P+NF PLW P+ +A GN++++K + G + +L +AG P G
Sbjct: 130 ILAIXPWNF----PLWQVLRGAVPILLA-GNSYLLKHAPNVTGCAQXIARILAEAGTPAG 184
Query: 224 VVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIM 283
V ++ ++ V+ + P I A++ GS +AG I + K+ +G + +++
Sbjct: 185 VYGWVNANNEGVSQXINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL 244
Query: 284 SDANRSNTLNQLVGAAFGAAGQRCMALSTVIF-VGEAVEWLPELKKRAEALKVSAGNVPG 342
+DA+ + V + GQ C A I G A + A ALK V
Sbjct: 245 NDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEE 304
Query: 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL 378
DLGP ++ + +Q+ V EGA LLL G +
Sbjct: 305 NDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKI 340
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 145/329 (44%), Gaps = 14/329 (4%)
Query: 51 NPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110
NP TNE T +++ A+ A Y+ W +R ++L + N +K + +LA
Sbjct: 10 NPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELA 69
Query: 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG---ETLAGVAKDMDI---HSYRV 164
+ T E GK L++++ + VE C SI E L + D+ + +
Sbjct: 70 KXXTLEXGKLLSESK-------EEVELCVSICNYYADHGPEXLKPTKLNSDLGNAYYLKQ 122
Query: 165 PLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGV 224
GV P+NFP + +F GN ++K + PG+ + ++ +AG P G
Sbjct: 123 STGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGS 182
Query: 225 VNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS 284
+ ++ ++D + I P I+ ++ GS++ G + E KN K+ +G + +++
Sbjct: 183 LINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTXELGGNDAFIVLD 242
Query: 285 DANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV-EWLPELKKRAEALKVSAGNVPGT 343
DA+ N L A GQ C + +I E L ELK LK T
Sbjct: 243 DADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADT 302
Query: 344 DLGPVISPQAKERILSLIQSGVDEGATLL 372
L P S +AKE++ + ++ +D GA +
Sbjct: 303 TLPPXNSEKAKEKLEAQVKEAIDAGAKVF 331
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 149/336 (44%), Gaps = 7/336 (2%)
Query: 47 IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106
I + PA NE + RV +A+ A+ E V A++A++ W+ R +++ ++ + ++ +
Sbjct: 39 ITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKI 98
Query: 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPL 166
+ L ++ E GK L + G+V + + + + ++ G L + P+
Sbjct: 99 QVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPV 158
Query: 167 GVTAGITPFNFPAMIPLWMFPVAIACGNTHVIK----PSERDPGACMMLVDMLTQAGCPP 222
G+ IT FNFP + W +A+ CGN + K S ++ +L P
Sbjct: 159 GLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPG 218
Query: 223 GVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVI 282
+ ++ G D + + +SF GS Q GK + + R +G N +
Sbjct: 219 AICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIA 278
Query: 283 MSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNV 340
DA+ S + + AA G AGQRC + +F+ E++ E + LKK ++V
Sbjct: 279 FEDADLSLVVPSALFAAVGTAGQRCTT-ARRLFIHESIHDEVVNRLKKAYAQIRVGNPWD 337
Query: 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376
P GP+ + QA L ++ EG T++ G+
Sbjct: 338 PNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGK 373
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 158/347 (45%), Gaps = 10/347 (2%)
Query: 33 YIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQ 92
YI G+++ + + ++ +P VV A ++++AV +A++A+ W++ + R
Sbjct: 9 YIAGQWLAGQG-ETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRI 67
Query: 93 QVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAG 152
++L R +K+ +LA I EE GK L ++ +V + V GE
Sbjct: 68 ELLERFAATLKSRADELARVIGEETGKPLWESATEVTSXVNKVAISVQAFRERTGEKSGP 127
Query: 153 VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLV 212
+A + ++ P GV A P+NFP +P A+ GN V KPSE P + +
Sbjct: 128 LADATAVLRHK-PHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTL 186
Query: 213 DMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYER-GAKNGKRVQ 271
QAG P GV+N++ G + + H + + F GS + G ++ + G + K +
Sbjct: 187 KAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILA 246
Query: 272 SNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIF----VGEAVEWLPELK 327
G N V+ A+ + ++ +AF +AGQRC ++ G+A+ L L
Sbjct: 247 LEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDAL--LARLV 304
Query: 328 KRAEALKVSA-GNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLL 373
+ L+V P G VIS A E +L + + +GA LL
Sbjct: 305 AVSATLRVGRFDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLL 351
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 166/359 (46%), Gaps = 25/359 (6%)
Query: 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYET--WSKTSI 88
KL+I GK+ + +D I++ PAT E V +VP A A++++AVA+A+ A++ W T
Sbjct: 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPP 69
Query: 89 ITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGE 148
R V I A +K LAE + K LA G + ++E + ++
Sbjct: 70 HERAAV-------IAAAVKMLAER-KDLFTKLLAAETG---QPPTIIETMHWMGSMGAMN 118
Query: 149 TLAGVAK-----DMDIHSY------RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHV 197
AG A + SY R P+GV I +N P + + A+ G T V
Sbjct: 119 YFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIV 178
Query: 198 IKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGK 257
+KP+ P L ++ + G P GV++V+ G + + +PDI +F GS G+
Sbjct: 179 LKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGR 238
Query: 258 YIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFV- 316
+ R A+ K +G K+ +I+ D + + + +V + AGQ C+ + ++
Sbjct: 239 EVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPR 298
Query: 317 GEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDG 375
E + + AL V + P +GP+IS + + R+ I G++EGA L+ G
Sbjct: 299 SRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGG 357
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 141/309 (45%), Gaps = 19/309 (6%)
Query: 61 VPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKT 120
+ ATP + +AVA+A+ + WS+T R L + +++++ + E GKT
Sbjct: 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKT 603
Query: 121 LADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDM-------DIHSYRVPLGVTAGIT 173
L DA L L+ C QG L G M + + R GV I+
Sbjct: 604 LDDA----LSELREAADFCRY-YAAQGRKLFGSETAMPGPTGESNALTMR-GRGVFVAIS 657
Query: 174 PFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHD 233
P+NFP I L A+ GN+ V KP+E+ P V +L +AG P + ++ G
Sbjct: 658 PWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGR 717
Query: 234 AVNFICDHPDIRAISFVGSDQAGKYIYER-GAKNGKRVQ--SNMGAKNHGVIMSDANRSN 290
+ HPDI + F GS + + I AK+G V + G N + + A
Sbjct: 718 IGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQ 777
Query: 291 TLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNVPGTDLGPV 348
+ +V +AF +AGQRC AL ++FV E V + + A LK+ + T +GPV
Sbjct: 778 VADDVVTSAFRSAGQRCSALR-LLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPV 836
Query: 349 ISPQAKERI 357
I +AK+R+
Sbjct: 837 IDVEAKQRL 845
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 150/308 (48%), Gaps = 20/308 (6%)
Query: 65 TPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGK----- 119
+PA+++S ++ K + T + + R+Q L RL+ + N + L + E+ GK
Sbjct: 26 SPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85
Query: 120 TLADAEGDVLR----GLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPF 175
LA+ G VL L +++ + ++ + +A + + + P GVT I PF
Sbjct: 86 DLAEI-GAVLHEIDFALAHLDEWVAPVSVPSPDIIA----PSECYVVQEPYGVTYIIGPF 140
Query: 176 NFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV 235
N+P + L AI GNT +IKPSE P ++ ++ +A P V VI G D
Sbjct: 141 NYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPE-YVAVIQGGRDEN 199
Query: 236 NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQL 295
+ + P I F GS GK + + AK+ V +G K +++ DA+ T+NQL
Sbjct: 200 SHLLSLP-FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQL 258
Query: 296 VGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKE 355
+ F +GQ C+A ++V +V+ L++ E +K + T G +++ + +
Sbjct: 259 MFGKFINSGQTCIA-PDYLYVHYSVKD-ALLERLVERVKTELPEINST--GKLVTERQVQ 314
Query: 356 RILSLIQS 363
R++SL+++
Sbjct: 315 RLVSLLEA 322
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 149/308 (48%), Gaps = 20/308 (6%)
Query: 65 TPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGK----- 119
+PA+++S ++ K + T + + R+Q L RL+ + N + L + E+ GK
Sbjct: 26 SPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85
Query: 120 TLADAEGDVLR----GLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPF 175
LA+ G VL L +++ + ++ + +A + + + P GVT I PF
Sbjct: 86 DLAEI-GAVLHEIDFALAHLDEWVAPVSVPSPDIIA----PSECYVVQEPYGVTYIIGPF 140
Query: 176 NFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAV 235
N+P + L AI GNT +IKPSE P ++ ++ +A P V VI G D
Sbjct: 141 NYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPE-YVAVIQGGRDEN 199
Query: 236 NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQL 295
+ + P I F GS GK + + AK+ V +G K +++ DA+ T+NQL
Sbjct: 200 SHLLSLP-FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQL 258
Query: 296 VGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKE 355
+ F +GQ +A ++V +V+ L++ E +K + T G +++ + +
Sbjct: 259 MFGKFINSGQTXIA-PDYLYVHYSVKD-ALLERLVERVKTELPEINST--GKLVTERQVQ 314
Query: 356 RILSLIQS 363
R++SL+++
Sbjct: 315 RLVSLLEA 322
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 146/341 (42%), Gaps = 7/341 (2%)
Query: 44 TDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIK 103
T I++ NP T + + P + A++A W + + R L + + I
Sbjct: 5 TKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAIL 64
Query: 104 ANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI-PTIMQGETLAGVAKDMDIHSY 162
+ +QL E + + G+ L+ ++ L +++ C + P ++Q + +
Sbjct: 65 SRREQLTEALVNDTGR-LSITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQS 123
Query: 163 RVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPP 222
VP + I+P+NFP + A+ G V+KPSE P L+ L
Sbjct: 124 LVPYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPRFVAPLLXALNTVPELR 183
Query: 223 GVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVI 282
V+ + G + + ++ D + F GS G+ + E A+ +G K+ ++
Sbjct: 184 DVLIFVEGGGETGANLINYVDF--VCFTGSVATGREVAETAARRFIPAYLELGGKDPAIV 241
Query: 283 MSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAV--EWLPELKKRAEALKVSAGNV 340
+ AN + ++ A GQ C+++ I+V E+ E+ +L +A L+++ V
Sbjct: 242 LESANLELATSAILWGAVVNTGQSCLSIER-IYVAESKFEEFYHQLIAKAHRLQLAYPLV 300
Query: 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVG 381
+GP+I+ + I I V++GA + G+ ++G
Sbjct: 301 EDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELG 341
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 145/342 (42%), Gaps = 38/342 (11%)
Query: 58 VTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ--LAENITE 115
V + A A + A+ +A A + W + R QV + +++ + LA+ +
Sbjct: 91 VAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVG 150
Query: 116 EQGKTLADAEGDVLRGL-QVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITP 174
QGKT+ AE D L ++GE V + YR G A I+P
Sbjct: 151 -QGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISP 209
Query: 175 FNFPAM------IPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVI 228
FNF A+ P M GN + KPS+ A + +L +AG PP ++ +
Sbjct: 210 FNFTAIGGNLAGAPALM-------GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFV 262
Query: 229 HGAHDAVNF---ICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQS------NMGAKNH 279
D F + + I+F GS K+++ + A+N R ++ G KN
Sbjct: 263 PA--DGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNF 320
Query: 280 GVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKR--AEALKVSA 337
+ S A+ + ++ + +AF GQ+C A S ++V +++ W P++K R E ++
Sbjct: 321 HFVHSSADVDSVVSGTLRSAFEYGGQKCSACSR-LYVPKSL-W-PQIKGRLLEEHSRIKV 377
Query: 338 GNVPGTDLG----PVISPQAKERILSLIQSGVDEGATLLLDG 375
G+ P D G VI +A RI ++ + +L G
Sbjct: 378 GD-PAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAG 418
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 58 VTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK-QLAENITEE 116
V + A + + A+ +A A + W I R Q+ + +++ + ++
Sbjct: 94 VAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVG 153
Query: 117 QGKTLADAEGDVLRGL-QVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPF 175
QGKT+ AE D L ++G+ V + YR G A I+PF
Sbjct: 154 QGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPF 213
Query: 176 NFPAM------IPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH 229
NF A+ P M GN + KPS+ A + +L +AG PP ++ +
Sbjct: 214 NFTAIGGNLAGAPALM-------GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVP 266
Query: 230 GAHDAVNF---ICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQS------NMGAKNHG 280
D F + + I+F GS K+++++ A+N R + G KN
Sbjct: 267 A--DGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 281 VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKR--AEALKVSAG 338
+ A+ + ++ + +AF GQ+C A S ++V ++ W P++K R E ++ G
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACSR-LYVPHSL-W-PQIKGRLLEEHSRIKVG 381
Query: 339 NVPGTDLGPVIS 350
+ P D G S
Sbjct: 382 D-PAEDFGTFFS 392
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 58 VTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK-QLAENITEE 116
V + A + + A+ +A A + W I R Q+ + +++ + ++
Sbjct: 94 VAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVG 153
Query: 117 QGKTLADAEGDVLRGL-QVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPF 175
QGKT+ AE D L ++G+ V + YR G A I+PF
Sbjct: 154 QGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPF 213
Query: 176 NFPAM------IPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH 229
NF A+ P M GN + KPS+ A + +L +AG PP ++ +
Sbjct: 214 NFTAIGGNLAGAPALM-------GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVP 266
Query: 230 GAHDAVNF---ICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQS------NMGAKNHG 280
D F + + I+F GS K+++++ A+N R + G KN
Sbjct: 267 A--DGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 281 VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKR--AEALKVSAG 338
+ A+ + ++ + +AF GQ+C A + ++V ++ W P++K R E ++ G
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACAR-LYVPHSL-W-PQIKGRLLEEHSRIKVG 381
Query: 339 NVPGTDLGPVIS 350
+ P D G S
Sbjct: 382 D-PAEDFGTFFS 392
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 129/312 (41%), Gaps = 32/312 (10%)
Query: 58 VTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK-QLAENITEE 116
V + A + + A+ +A A + W I R Q+ + +++ + ++
Sbjct: 94 VAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVG 153
Query: 117 QGKTLADAEGDVLRGL-QVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPF 175
QGKT+ AE D L ++G+ V + YR G A I+PF
Sbjct: 154 QGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPF 213
Query: 176 NFPAM------IPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH 229
NF A+ P M GN + KPS+ A + +L +AG PP ++ +
Sbjct: 214 NFTAIGGNLAGAPALM-------GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVP 266
Query: 230 GAHDAVNF---ICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQS------NMGAKNHG 280
D F + + I+F GS K+++++ A+N R + G KN
Sbjct: 267 A--DGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 281 VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKR--AEALKVSAG 338
+ A+ + ++ + +AF GQ+C A ++V ++ W P++K R E ++ G
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSAC-LRLYVPHSL-W-PQIKGRLLEEHSRIKVG 381
Query: 339 NVPGTDLGPVIS 350
+ P D G S
Sbjct: 382 D-PAEDFGTFFS 392
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 129/310 (41%), Gaps = 28/310 (9%)
Query: 69 MESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGK----TLADA 124
+ V A++A+ + S+ R Q L LQ +I N+K ++ + + GK + +
Sbjct: 3 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 62
Query: 125 EGDVLRGLQVVEQCCSIPTIMQGETLAGVAK----DMDIHSYRVPLGVTAGITPFNFPAM 180
VL L + +P + E +A + D+ IHS PLGV I +N+P
Sbjct: 63 VAHVLEELDTTIK--ELPDWAEDEPVAKTRQTQQDDLYIHSE--PLGVVLVIGAWNYPFN 118
Query: 181 IPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICD 240
+ + A+A GN ++KPSE +L ++ Q + V G + + +
Sbjct: 119 LTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKE 178
Query: 241 HPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAF 300
D I + GS GK + AK+ V +G K+ + D + ++ F
Sbjct: 179 RFD--HIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 236
Query: 301 GAAGQRCMALSTVIFVGEAVEWLPELKKR-AEALKVSAGNVPGT------DLGPVISPQA 353
+GQ C+A ++ P ++ + E LK S + G D G +I+ +
Sbjct: 237 MNSGQTCVAPDYILCD-------PSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRH 289
Query: 354 KERILSLIQS 363
+R+ LI +
Sbjct: 290 FQRVKGLIDN 299
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 131/310 (42%), Gaps = 13/310 (4%)
Query: 61 VPKATP-AEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGK 119
VP+ + +++ AV A+ A+ + + R Q L LQ +I+ ++L + + K
Sbjct: 11 VPRGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHK 70
Query: 120 TLADAE-GDVLRGLQVVEQCCS-IPTIMQGETLAGVAK----DMDIHSYRVPLGVTAGIT 173
+A +V+ L+ +E +P E + + ++ IHS PLGV I
Sbjct: 71 NEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSE--PLGVVLVIG 128
Query: 174 PFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-H 232
+N+P + + AIA GN V+KPSE +L ++ Q + VI+G
Sbjct: 129 TWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVP 187
Query: 233 DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTL 292
+ + + D I + GS GK I AK+ V +G K+ + + +
Sbjct: 188 ETTELLKERFD--HILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVAC 245
Query: 293 NQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQ 352
++ F +GQ C+A ++ + E K++ D G +IS +
Sbjct: 246 RRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISAR 305
Query: 353 AKERILSLIQ 362
+R++ LI+
Sbjct: 306 HFQRVMGLIE 315
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 121/296 (40%), Gaps = 38/296 (12%)
Query: 43 ATDWID---------LHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQ 93
A +W+D H PA + V V + A +A++A+ T+ +S R
Sbjct: 35 AGEWLDGAGTFASAPAHGPAHDFAVGTVEL-----VNRACEAAEEAFWTYGYSSRKERAA 89
Query: 94 VLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL--- 150
L + + I+A + + E ++E G A G+ RG + I +G+ L
Sbjct: 90 FLRAIADEIEARAEAITEIGSQETGLPEARLNGE--RGRTTGQLRLFADHIEKGDYLDRR 147
Query: 151 -------AGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM--FPVAIACGNTHVIKPS 201
A +I + P+G A NFP A+A G V+K
Sbjct: 148 VDAAXPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGH 207
Query: 202 ERDPGACMMLVDMLTQA----GCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAG 256
PG ++ + + A G PGV ++I G + D + + HP I+A+ F GS G
Sbjct: 208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGG 267
Query: 257 KYIYERGAKNGKRVQ--SNMGAKNHGVIMSDA--NRSNTLNQ-LVGAAFGAAGQRC 307
+ +++ A + + +G+ N ++ +A R+ TL Q G+ AGQ C
Sbjct: 268 RALFDLCAARPEPIPFFGELGSVNPXFLLPEALKARAETLGQGWAGSLTXGAGQFC 323
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 20/223 (8%)
Query: 158 DIHSYRVPLGVTAGITPFNFPAMIPLWMFPVA--IACGNTHVIKPSERDPGACMMLVDML 215
DI ++ LG A NFP A +A G ++K PG ++ + +
Sbjct: 129 DIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECI 188
Query: 216 TQA----GCPPGVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270
QA P + ++ G A+ + HP+I+A+ F GS G+ ++ + + +
Sbjct: 189 EQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPI 248
Query: 271 --QSNMGAKNHGVIMSDANR--SNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPEL 326
+GA N I A R ++ +Q V + GQ C V + PE
Sbjct: 249 PFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALN-----TPET 303
Query: 327 KKRAE-ALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEG 368
+ E A + P T L P I + +++S G D+G
Sbjct: 304 QAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVS---RGSDDG 343
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 164 VPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQ----AG 219
VPLGV AG+ P P ++ ++I GN+ V P A + V ++++ AG
Sbjct: 107 VPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAG 166
Query: 220 CPPGVVN-----VIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263
CP G ++ I G + + H D I G K Y G
Sbjct: 167 CPKGAISCMTVPTIQG----TDQLMKHKDTAVILATGGSAMVKAAYSSG 211
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 116/281 (41%), Gaps = 30/281 (10%)
Query: 62 PKATPAEMESAVASAKKAYETWSKTSIITRQQV--LFRLQNIIKANMKQ--LAENITEEQ 117
P AE+++ +A KKA E ++ S ++QV +FR ++ AN + LA+ EE
Sbjct: 2 PVTNXAELDAXIARVKKAQEEFATYS---QEQVDKIFRAASL-AANQARIPLAQQAVEES 57
Query: 118 GKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMD---IHSYRVPLGVTAGITP 174
G + E V++ E I + E G+ ++ D + P+G+ GI P
Sbjct: 58 GXGIV--EDKVIKNHFASE---FIYNKYKDEQTCGILEEDDNLGTXTIAEPVGIICGIVP 112
Query: 175 FNFPAMIPLWMFPVAIACGNTHVIKPSERDPG----ACMMLVDMLTQAGCPPGVVNVI-H 229
P ++ +++ N + P R A +++D AG P ++ I
Sbjct: 113 TTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQ 172
Query: 230 GAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD-ANR 288
+ + N + H DI I G K Y G + +GA N V++ + A+
Sbjct: 173 PSVELSNALXKHDDIALILATGGPGXVKAAYSSG-----KPAIGVGAGNVPVVIDETADI 227
Query: 289 SNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKR 329
+ ++ + G C + VI V E + E+K+R
Sbjct: 228 KRAVASVLXSKTFDNGVVCASEQAVIVVDEVYD---EVKER 265
>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas
pdb|1W0I|B Chain B, Arabidopsis Thaliana Mitochondrial Kas
pdb|2IX4|A Chain A, Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl Acp
Synthase Hexanoic Acid Complex
pdb|2IX4|B Chain B, Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl Acp
Synthase Hexanoic Acid Complex
Length = 431
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 196 HVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQA 255
H+ +P E GA + + L Q+G P ++ ++ AH I D + RAI V S+ A
Sbjct: 285 HITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVN-AHATSTPIGDAVEARAIKTVFSEHA 343
>pdb|1G5G|A Chain A, Fragment Of Fusion Protein From Newcastle Disease Virus
pdb|1G5G|B Chain B, Fragment Of Fusion Protein From Newcastle Disease Virus
pdb|1G5G|C Chain C, Fragment Of Fusion Protein From Newcastle Disease Virus
pdb|1G5G|D Chain D, Fragment Of Fusion Protein From Newcastle Disease Virus
pdb|1G5G|E Chain E, Fragment Of Fusion Protein From Newcastle Disease Virus
pdb|1G5G|F Chain F, Fragment Of Fusion Protein From Newcastle Disease Virus
Length = 481
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 356 RILSLIQSGVDEGATLLLDGRNLKVGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFY 415
++ SLI SG+ G +L D + +GI V +P S+ + R ++L +GF
Sbjct: 228 QLSSLISSGLITGNPILYDSQTQLLGIQVTLP---SVGNLNNMRATYLETLSVSTTKGFA 284
Query: 416 FYTETKTVTQL 426
K VTQ+
Sbjct: 285 SALVPKVVTQV 295
>pdb|3ZWU|A Chain A, Pseudomonas Fluorescens Phox In Complex With Vanadate, A
Transition State Analogue
pdb|3ZWU|B Chain B, Pseudomonas Fluorescens Phox In Complex With Vanadate, A
Transition State Analogue
pdb|4A9V|A Chain A, Pseudomonas Fluorescens Phox
pdb|4A9X|A Chain A, Pseudomonas Fluorescens Phox In Complex With The Substrate
Analogue Appcp
Length = 592
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 243 DIRAISFVGSDQAGKYIYE---RGAKNGKRVQSNMGAKNHGVI 282
D RA+ ++G D+ G++IY+ R N + ++N +HG +
Sbjct: 282 DGRAVVYMGDDERGEFIYKFVSRDKINHRNAKANRDILDHGTL 324
>pdb|2AFR|A Chain A, The Crystal Structure Of Putative Precorrin Isomerase Cbic
In Cobalamin Biosynthesis
pdb|2AFV|A Chain A, The Crystal Structure Of Putative Precorrin Isomerase Cbic
In Cobalamin Biosynthesis
pdb|2AFV|B Chain B, The Crystal Structure Of Putative Precorrin Isomerase Cbic
In Cobalamin Biosynthesis
Length = 231
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
Query: 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEALKVSAGNVP 341
++ +A R N+ + + A + ++I +G A L E++K + +
Sbjct: 107 VIENAKRKNSTRAI--ESIQKANSFNLLNESIIVIGNAPTALLEIEKLIRQEGIKPALIV 164
Query: 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLKVGINVPIPVPLSMFSFTGSRGS 401
G +G V + ++KE IL L V +L GR K G + + + ++ + RG
Sbjct: 165 GVPVGFVSAKESKESILKLEYYNVTSIPYILTMGR--KGGSTIAVAILHALLLLSSKRGE 222
Query: 402 FL 403
L
Sbjct: 223 RL 224
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,876,013
Number of Sequences: 62578
Number of extensions: 534420
Number of successful extensions: 1603
Number of sequences better than 100.0: 94
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1227
Number of HSP's gapped (non-prelim): 118
length of query: 445
length of database: 14,973,337
effective HSP length: 102
effective length of query: 343
effective length of database: 8,590,381
effective search space: 2946500683
effective search space used: 2946500683
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)