Query psy10608
Match_columns 445
No_of_seqs 260 out of 2105
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 22:43:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10608.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10608hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 3.2E-93 1.1E-97 740.7 47.4 399 27-430 4-486 (490)
2 4f3x_A Putative aldehyde dehyd 100.0 2.2E-89 7.6E-94 714.3 47.9 406 16-427 12-497 (498)
3 3ed6_A Betaine aldehyde dehydr 100.0 7.9E-89 2.7E-93 713.1 49.4 415 10-428 9-511 (520)
4 4e4g_A Methylmalonate-semialde 100.0 8.8E-89 3E-93 712.9 48.4 403 27-430 24-508 (521)
5 3ifg_A Succinate-semialdehyde 100.0 5.9E-89 2E-93 709.2 46.2 394 29-426 12-483 (484)
6 3ek1_A Aldehyde dehydrogenase; 100.0 1E-88 3.6E-93 709.7 46.1 395 29-427 32-502 (504)
7 3rh9_A Succinate-semialdehyde 100.0 4.4E-88 1.5E-92 705.2 48.2 396 27-427 9-484 (506)
8 3k2w_A Betaine-aldehyde dehydr 100.0 8.9E-88 3E-92 703.0 48.4 399 26-428 9-489 (497)
9 3iwj_A Putative aminoaldehyde 100.0 2E-87 6.7E-92 701.3 49.3 400 26-429 4-491 (503)
10 3u4j_A NAD-dependent aldehyde 100.0 3E-87 1E-91 702.3 49.1 397 28-428 21-499 (528)
11 2o2p_A Formyltetrahydrofolate 100.0 2.6E-87 8.9E-92 701.1 46.9 394 30-427 37-517 (517)
12 3prl_A NADP-dependent glyceral 100.0 3.8E-87 1.3E-91 698.6 47.4 395 28-428 10-484 (505)
13 1a4s_A ALDH, betaine aldehyde 100.0 4.1E-87 1.4E-91 698.4 47.3 396 28-428 18-497 (503)
14 1t90_A MMSDH, probable methylm 100.0 6.2E-87 2.1E-91 695.2 48.0 402 28-430 4-483 (486)
15 1bxs_A Aldehyde dehydrogenase; 100.0 8.8E-87 3E-91 695.2 48.8 394 29-427 20-496 (501)
16 3jz4_A Succinate-semialdehyde 100.0 9E-87 3.1E-91 693.6 48.4 394 29-426 9-480 (481)
17 3r31_A BADH, betaine aldehyde 100.0 2.5E-87 8.6E-92 701.2 43.4 393 28-428 13-489 (517)
18 3b4w_A Aldehyde dehydrogenase; 100.0 1.3E-86 4.3E-91 693.5 47.5 394 29-428 8-483 (495)
19 2d4e_A 5-carboxymethyl-2-hydro 100.0 3.3E-86 1.1E-90 693.5 50.4 395 29-427 26-505 (515)
20 2imp_A Lactaldehyde dehydrogen 100.0 2.5E-86 8.4E-91 690.0 48.5 394 29-426 6-478 (479)
21 1wnd_A Putative betaine aldehy 100.0 2.6E-86 9E-91 690.7 48.0 394 27-426 21-494 (495)
22 3i44_A Aldehyde dehydrogenase; 100.0 3E-86 1E-90 690.6 46.7 389 28-424 24-495 (497)
23 1o04_A Aldehyde dehydrogenase, 100.0 2.9E-86 9.9E-91 691.1 45.9 392 31-427 21-495 (500)
24 2ve5_A BADH, betaine aldehyde 100.0 7.9E-86 2.7E-90 688.3 47.5 397 27-428 4-484 (490)
25 3qan_A 1-pyrroline-5-carboxyla 100.0 6.4E-86 2.2E-90 693.7 46.8 394 28-428 36-517 (538)
26 3r64_A NAD dependent benzaldeh 100.0 1.4E-85 4.9E-90 688.0 48.7 399 27-429 10-487 (508)
27 4dng_A Uncharacterized aldehyd 100.0 9.9E-86 3.4E-90 686.7 45.8 398 27-427 4-478 (485)
28 2w8n_A Succinate-semialdehyde 100.0 1.4E-85 4.7E-90 684.8 45.7 393 28-426 11-485 (487)
29 2j6l_A Aldehyde dehydrogenase 100.0 3.4E-85 1.2E-89 684.0 46.6 395 28-427 22-499 (500)
30 3pqa_A Lactaldehyde dehydrogen 100.0 3.7E-85 1.3E-89 680.6 45.0 387 32-428 2-465 (486)
31 1euh_A NADP dependent non phos 100.0 7.9E-85 2.7E-89 677.9 46.2 390 29-427 4-474 (475)
32 1uxt_A Glyceraldehyde-3-phosph 100.0 1.6E-84 5.5E-89 678.6 46.9 391 29-427 18-492 (501)
33 1uzb_A 1-pyrroline-5-carboxyla 100.0 3.4E-84 1.1E-88 678.9 46.1 392 29-426 37-515 (516)
34 3ros_A NAD-dependent aldehyde 100.0 2.5E-84 8.5E-89 674.0 42.9 377 46-428 5-459 (484)
35 3ty7_A Putative aldehyde dehyd 100.0 3.1E-84 1E-88 674.4 40.5 388 28-425 6-475 (478)
36 3etf_A Putative succinate-semi 100.0 1.7E-82 5.8E-87 658.9 45.5 378 44-426 6-460 (462)
37 3ju8_A Succinylglutamic semial 100.0 3.7E-81 1.3E-85 652.4 42.2 386 31-427 7-471 (490)
38 4e3x_A Delta-1-pyrroline-5-car 100.0 2.7E-81 9.1E-86 660.2 40.4 395 28-427 62-551 (563)
39 4h7n_A Aldehyde dehydrogenase; 100.0 3.9E-80 1.3E-84 642.5 39.9 382 42-428 3-464 (474)
40 4f9i_A Proline dehydrogenase/d 100.0 1E-79 3.5E-84 681.6 43.8 395 29-428 531-1011(1026)
41 2y53_A Aldehyde dehydrogenase 100.0 1.7E-78 5.9E-83 638.5 38.1 389 30-427 8-519 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 1.5E-76 5.1E-81 612.9 40.3 367 46-425 7-455 (457)
43 3sza_A Aldehyde dehydrogenase, 100.0 1.3E-75 4.5E-80 606.7 40.1 368 63-441 14-464 (469)
44 3v4c_A Aldehyde dehydrogenase 100.0 7E-75 2.4E-79 610.2 38.3 384 26-424 26-515 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 1.4E-72 4.9E-77 590.4 40.5 375 40-425 2-481 (510)
46 3haz_A Proline dehydrogenase; 100.0 9.3E-73 3.2E-77 624.7 40.0 362 61-427 544-987 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 1.3E-68 4.5E-73 553.1 23.6 372 48-427 10-435 (463)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.9E-65 6.5E-70 530.8 23.5 358 60-429 5-451 (464)
49 4ghk_A Gamma-glutamyl phosphat 100.0 5.8E-63 2E-67 509.3 23.2 353 66-427 25-439 (444)
50 1o20_A Gamma-glutamyl phosphat 100.0 1.8E-62 6.1E-67 503.3 26.7 353 66-427 13-422 (427)
51 1vlu_A Gamma-glutamyl phosphat 100.0 5.9E-63 2E-67 511.5 20.1 348 68-427 15-440 (468)
52 3my7_A Alcohol dehydrogenase/a 100.0 1.3E-56 4.5E-61 463.1 26.9 287 61-371 1-296 (452)
53 4gic_A HDH, histidinol dehydro 91.2 13 0.00044 36.9 21.4 236 82-332 26-293 (423)
54 1vmd_A MGS, methylglyoxal synt 69.6 5.2 0.00018 34.9 4.7 143 159-336 19-173 (178)
55 1b93_A Protein (methylglyoxal 58.9 12 0.00042 31.7 4.9 113 167-304 12-135 (152)
56 2xw6_A MGS, methylglyoxal synt 54.3 3.7 0.00013 34.1 0.9 77 186-272 24-110 (134)
57 3v42_A Folliculin; tumor suppr 49.6 14 0.00049 33.4 4.1 67 182-255 20-86 (226)
58 2yvq_A Carbamoyl-phosphate syn 47.2 20 0.00068 29.8 4.4 62 212-274 60-132 (143)
59 2l82_A Designed protein OR32; 44.3 1.1E+02 0.0039 24.0 11.3 104 246-373 5-108 (162)
60 1kae_A HDH, histidinol dehydro 39.8 2.9E+02 0.0099 27.3 21.2 189 127-332 87-287 (434)
61 2zfz_A Arginine repressor; DNA 38.2 42 0.0014 24.8 4.5 38 192-233 20-57 (79)
62 1b4b_A Arginine repressor; cor 36.2 40 0.0014 24.4 4.0 37 192-232 12-48 (71)
63 3fgh_A Transcription factor A, 35.4 80 0.0028 21.9 5.6 35 76-110 30-64 (67)
64 2p5m_A Arginine repressor; alp 32.5 40 0.0014 25.2 3.6 37 192-232 24-60 (83)
65 1xxa_A ARGR, arginine represso 32.1 37 0.0013 25.1 3.3 39 192-233 14-52 (78)
66 3mwd_B ATP-citrate synthase; A 30.1 2.3E+02 0.0078 27.0 9.4 126 190-333 166-318 (334)
67 2ixa_A Alpha-N-acetylgalactosa 29.5 2.5E+02 0.0086 27.5 10.1 86 186-273 35-121 (444)
68 2eqz_A High mobility group pro 28.1 1.1E+02 0.0038 22.5 5.5 35 76-110 49-83 (86)
69 3v4g_A Arginine repressor; vib 27.9 36 0.0012 29.6 2.9 40 191-233 115-154 (180)
70 2co9_A Thymus high mobility gr 27.2 1.6E+02 0.0055 22.4 6.5 39 78-116 51-89 (102)
71 2ioj_A Hypothetical protein AF 26.2 41 0.0014 27.5 2.9 47 223-269 53-100 (139)
72 1use_A VAsp, vasodilator-stimu 25.5 72 0.0025 20.9 3.3 27 92-118 14-40 (45)
73 1v63_A Nucleolar transcription 24.4 1.5E+02 0.0052 22.7 5.8 39 76-114 38-76 (101)
74 1wu2_A MOEA protein, molybdopt 24.0 22 0.00075 35.0 0.9 66 192-257 190-264 (396)
75 1y5e_A Molybdenum cofactor bio 23.2 49 0.0017 28.1 2.9 53 204-256 29-85 (169)
76 1gt0_D Transcription factor SO 22.7 1.2E+02 0.0041 21.8 4.7 32 77-108 35-66 (80)
77 1hry_A Human SRY; DNA, DNA-bin 22.7 1.4E+02 0.0048 21.2 5.0 30 78-107 38-67 (76)
78 1b4a_A Arginine repressor; hel 21.4 84 0.0029 26.3 4.0 37 192-232 90-126 (149)
79 3iwt_A 178AA long hypothetical 21.3 1.3E+02 0.0045 25.4 5.4 55 202-256 36-94 (178)
80 2crj_A SWI/SNF-related matrix- 20.7 1.2E+02 0.0042 22.6 4.5 34 78-111 41-74 (92)
81 3ufx_B Succinyl-COA synthetase 20.0 4.7E+02 0.016 25.3 9.8 68 207-276 259-342 (397)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=3.2e-93 Score=740.74 Aligned_cols=399 Identities=29% Similarity=0.480 Sum_probs=374.0
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+.+.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|+++++.|++|+
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 45568999999999988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||+.+++. |+..+++.++||+++.+.+.++..+ ...+...+++++|+|||++|+|||||+.+.+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEE-EETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccc-ccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999986 6999999999999998888777665 345667889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHH-Hh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYE-RG 263 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~-~a 263 (445)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|.+ .+
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a 242 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999 4678999999999999999999999998876 55
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
++++||++||||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|||.++
T Consensus 243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRV-FIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceee-ccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 67899999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce------------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------ 379 (445)
++++|||+++.+++++.++|++++++||++++||.+..
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 99999999999999999999999999999999996311
Q ss_pred -------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 -------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
||||++... .+.+||||+|+||+| +++|++||++||+.|+
T Consensus 402 deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~PFGG~k~SG~G--re~G~~gl~~ft~~K~ 478 (490)
T 2wme_A 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES-PAEMPVGGYKQSGVG--RENGLTTLAHYTRIKS 478 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCC-CCCCCcccccccccC--chhHHHHHHHhhceeE
Confidence 999986554 478999999999999 6799999999999999
Q ss_pred EEeecccc
Q psy10608 423 VTQLWRES 430 (445)
Q Consensus 423 v~~~~~~~ 430 (445)
|++++.+.
T Consensus 479 v~i~~g~~ 486 (490)
T 2wme_A 479 VQVELGDY 486 (490)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 99887543
No 2
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=2.2e-89 Score=714.27 Aligned_cols=406 Identities=22% Similarity=0.374 Sum_probs=372.4
Q ss_pred cccccccccccccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Q psy10608 16 HMKTFRQFIRHIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVL 95 (445)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L 95 (445)
..++||.++.+|...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|
T Consensus 12 ~~~~~~~~~~~~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L 90 (498)
T 4f3x_A 12 DLGTENLYFQSMMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNAL 90 (498)
T ss_dssp -----------CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCccchhhhhccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 35678999999998999999999988766 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhCCChHhh-hHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECC
Q psy10608 96 FRLQNIIKANMKQLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITP 174 (445)
Q Consensus 96 ~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 174 (445)
+++++.|++++++|++++++|+|||..++ +.|+..+++.++||++..+.+.++..+....+...++.++|+|||++|+|
T Consensus 91 ~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 170 (498)
T 4f3x_A 91 LKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAP 170 (498)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECC
Confidence 99999999999999999999999999999 88999999999999998877766554422345678899999999999999
Q ss_pred CCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCH
Q psy10608 175 FNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSD 253 (445)
Q Consensus 175 ~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~ 253 (445)
||||+.+.++++++||++||+||+|||+.+|+++..|++++.++ +|+|+||+|+| +.+++++|+.||+|++|+||||+
T Consensus 171 wN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~ 249 (498)
T 4f3x_A 171 WNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDI 249 (498)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred CchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999999 56789999999999999999999
Q ss_pred HHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHH
Q psy10608 254 QAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAE 331 (445)
Q Consensus 254 ~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~ 331 (445)
++|+.|++.+++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++
T Consensus 250 ~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~ 328 (498)
T 4f3x_A 250 ATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRI-YAEAGIYEKLVADLTSAVS 328 (498)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEE-EEETTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceE-EecHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 7777 6999999999999
Q ss_pred hccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCC-EEEeCCccce-------------------------------
Q psy10608 332 ALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGA-TLLLDGRNLK------------------------------- 379 (445)
Q Consensus 332 ~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga-~~~~GG~~~~------------------------------- 379 (445)
++++|+|.|+++++|||+++++++++.++|++++++|| ++++||....
T Consensus 329 ~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 408 (498)
T 4f3x_A 329 TIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVS 408 (498)
T ss_dssp TCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred hcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEE
Confidence 99999999999999999999999999999999999999 9999996310
Q ss_pred --------------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHH
Q psy10608 380 --------------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFY 415 (445)
Q Consensus 380 --------------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~ 415 (445)
||||++.... +.+||||+|+||+| +++|++||+
T Consensus 409 v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~G--r~~G~~~l~ 485 (498)
T 4f3x_A 409 VTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLT-NEMPHGGIKQSGYG--KDMSVYALE 485 (498)
T ss_dssp EEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-TTSCBCCSGGGEEC--CBSHHHHHH
T ss_pred EEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC-CCCCcCCcCcCCcC--ccchHHHHH
Confidence 9999876554 78999999999999 679999999
Q ss_pred HhheeEEEEeec
Q psy10608 416 FYTETKTVTQLW 427 (445)
Q Consensus 416 ~~~~~k~v~~~~ 427 (445)
+||+.|+|++.+
T Consensus 486 ~~t~~k~v~~~~ 497 (498)
T 4f3x_A 486 DYTAVRHIMINH 497 (498)
T ss_dssp HTEEEEEEEEEC
T ss_pred HhhceEEEEEeC
Confidence 999999998764
No 3
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=7.9e-89 Score=713.10 Aligned_cols=415 Identities=27% Similarity=0.419 Sum_probs=378.4
Q ss_pred CCCCCccccccccccc----cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHh--hhh
Q psy10608 10 LQRTPSHMKTFRQFIR----HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAY--ETW 83 (445)
Q Consensus 10 ~~~~~~~~~~~~~~~~----~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~--~~w 83 (445)
-+...++|..+.+.+. .....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| +.|
T Consensus 9 ~~~~~~~~~~~~~~~~m~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w 88 (520)
T 3ed6_A 9 SGVDLGTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEW 88 (520)
T ss_dssp ----------CHHHHHHHHGGGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccCCCCccccccccccccccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccccc
Confidence 4556677777755552 3356689999999998888899999999999999999999999999999999999 899
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEE
Q psy10608 84 SKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYR 163 (445)
Q Consensus 84 ~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 163 (445)
+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|+..+++.++||++..+.+.++..+....+...++.+
T Consensus 89 ~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~ 168 (520)
T 3ed6_A 89 SQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVK 168 (520)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999988877766554222456778999
Q ss_pred ecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCC
Q psy10608 164 VPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHP 242 (445)
Q Consensus 164 ~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~ 242 (445)
+|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|+||+|+| +.++++.|+.||
T Consensus 169 ~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p 248 (520)
T 3ed6_A 169 EPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHK 248 (520)
T ss_dssp EECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCT
T ss_pred cCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 568899999999
Q ss_pred CccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cc
Q psy10608 243 DIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AV 320 (445)
Q Consensus 243 ~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~ 320 (445)
+|++|+||||+++|+.|++.+++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|
T Consensus 249 ~vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~i~d 327 (520)
T 3ed6_A 249 EVDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRI-LVQNSIKD 327 (520)
T ss_dssp TCSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEE-EEEHHHHH
T ss_pred CcCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceE-EEcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 7777 69
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------e---------------
Q psy10608 321 EWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL------K--------------- 379 (445)
Q Consensus 321 ~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~--------------- 379 (445)
+|+++|+++++++++|||.|+++++||++++++++++.++|++++++||++++||... .
T Consensus 328 ~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~ 407 (520)
T 3ed6_A 328 KFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTS 407 (520)
T ss_dssp HHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCC
Confidence 9999999999999999999999999999999999999999999999999999998641 0
Q ss_pred ----------------------------------------------------------EEEeCCCCCCCCCCccCCCCCC
Q psy10608 380 ----------------------------------------------------------VGINVPIPVPLSMFSFTGSRGS 401 (445)
Q Consensus 380 ----------------------------------------------------------V~iN~~~~~~~~~~pfGG~k~S 401 (445)
||||++... .+.+||||+|+|
T Consensus 408 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~-~~~~PfGG~k~S 486 (520)
T 3ed6_A 408 MRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY-FAQAPWGGYKQS 486 (520)
T ss_dssp SHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC-CTTSCBCCSGGG
T ss_pred CccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCcCCcCcC
Confidence 999987655 478999999999
Q ss_pred ccCCCCcchHHHHHHhheeEEEEeecc
Q psy10608 402 FLGENHFYGKQGFYFYTETKTVTQLWR 428 (445)
Q Consensus 402 G~G~~~~~g~~~l~~~~~~k~v~~~~~ 428 (445)
|+| +++|++||++||+.|+|++.+.
T Consensus 487 G~G--re~G~~gl~~~t~~k~v~~~~~ 511 (520)
T 3ed6_A 487 GIG--RELGKEGLEEYLVSKHILTNTN 511 (520)
T ss_dssp EES--CBSHHHHHHTTEEEEEEEEESS
T ss_pred cCC--ccchHHHHHHhhceEEEEEcCC
Confidence 999 6799999999999999998764
No 4
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.8e-89 Score=712.88 Aligned_cols=403 Identities=43% Similarity=0.745 Sum_probs=376.7
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
|...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 103 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNM 103 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
++|++++++|+|||..+++.|+..+++.++||+++.+++.+...+....+...++.++|+|||++|+|||||+.+.++++
T Consensus 104 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 183 (521)
T 4e4g_A 104 NELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMF 183 (521)
T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999988777766544322345567899999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+.+.++.|+.||+||+|+||||+.+|+.|++.++++
T Consensus 184 a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~ 263 (521)
T 4e4g_A 184 APAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMN 263 (521)
T ss_dssp HHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc---cchHHHHHHHHHHhccccCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE---AVEWLPELKKRAEALKVSAGNVPGT 343 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~---~~~f~~~l~~~~~~l~vG~p~~~~~ 343 (445)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+|.++++
T Consensus 264 lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~ 342 (521)
T 4e4g_A 264 GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVA-VPVGEETANRLIDKLVPMVESLRIGPYTDEKA 342 (521)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEE-EEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTC
T ss_pred CCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEE-EEeCchHHHHHHHHHHHHHHhccCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999 6665 4999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------e--------------------------------------
Q psy10608 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL------K-------------------------------------- 379 (445)
Q Consensus 344 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~-------------------------------------- 379 (445)
++||++++++++++.++|++++++||++++||... .
T Consensus 343 ~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 422 (521)
T 4e4g_A 343 DMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEE 422 (521)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999998421 0
Q ss_pred -----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||+++....+.+||||+|+||+|+.+++|++||++||+.|+|+
T Consensus 423 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~ 502 (521)
T 4e4g_A 423 ALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTIT 502 (521)
T ss_dssp HHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEE
Confidence 999987655457899999999999965579999999999999999
Q ss_pred eecccc
Q psy10608 425 QLWRES 430 (445)
Q Consensus 425 ~~~~~~ 430 (445)
+++.++
T Consensus 503 ~~~~~~ 508 (521)
T 4e4g_A 503 SRWPSG 508 (521)
T ss_dssp ECCCCC
T ss_pred EecCcc
Confidence 887654
No 5
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=5.9e-89 Score=709.23 Aligned_cols=394 Identities=28% Similarity=0.446 Sum_probs=370.6
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||+...+...+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999998877766665543234567889999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~ 251 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV 251 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999994 678999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|||.++++++
T Consensus 252 k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 330 (484)
T 3ifg_A 252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRF-FVHERVYDAFADKLAAAVSKLKVGRGTESGATL 330 (484)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeE-EEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999 7777 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------------- 379 (445)
|||+++++++++.++|++++++||++++||....
T Consensus 331 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 410 (484)
T 3ifg_A 331 GPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLAN 410 (484)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHh
Confidence 9999999999999999999999999999986310
Q ss_pred -----------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 -----------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 -----------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||||++... .+.+||||+|+||+| +++|++||++||+.|+|++.
T Consensus 411 ~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~PfGG~k~SG~G--r~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 411 DTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLIS-NEVAPFGGVKQSGLG--REGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp CSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC-CSSSCBCCEETTEEC--CBSTTTTTGGGEEEEEEEEE
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCcCCcCcCcCC--CCchHHHHHHhhceEEEEEe
Confidence 999986544 578999999999999 67999999999999999863
No 6
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1e-88 Score=709.66 Aligned_cols=395 Identities=28% Similarity=0.473 Sum_probs=371.5
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34789999999987888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||+.+.+...+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 112 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 191 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAP 191 (504)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998887776655443334566789999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 192 ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~l 271 (504)
T 3ek1_A 192 ALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTI 271 (504)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGT
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhc
Confidence 999999999999999999999999999999999999999998 4678899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.++++++
T Consensus 272 k~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 350 (504)
T 3ek1_A 272 KRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRI-YVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVI 350 (504)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEE-EEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEE-EEehhHHHHHHHHHHHHHhhcccCCCccccCcc
Confidence 9999999999999999999999999999999999999999999999 7777 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------------- 379 (445)
||++++++++++.++|++++++||++++||....
T Consensus 351 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 430 (504)
T 3ek1_A 351 GPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDT 430 (504)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCS
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCC
Confidence 9999999999999999999999999999986200
Q ss_pred ---------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 ---------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 ---------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||||++... .+.+||||+|+||+| +++|++|+++||+.|+|++.+
T Consensus 431 ~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 431 IFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLIS-NEVAPFGGVKQSGLG--REGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp SCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCC-CSSSCBCCSGGGEES--CBSTTTSGGGGEEEEEEEEEC
T ss_pred CCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCC-CCCCCcCCcCcCcCC--CCCcHHHHHHhhceEEEEEec
Confidence 999987643 578999999999999 679999999999999999765
No 7
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=4.4e-88 Score=705.25 Aligned_cols=396 Identities=26% Similarity=0.434 Sum_probs=372.2
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENR 88 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence 34568999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEE-ecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYR-VPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++.|+..+++.++||++..+...+...+. ..+...++.+ +|+|||++|+|||||+.+.+++
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 167 (506)
T 3rh9_A 89 EEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPE-KPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKK 167 (506)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSC-CGGGCEEEEEEEECCSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-CCCceeeEeecccceEEEEECCCchHHHHHHHH
Confidence 9999999999999999999999999999999999887776665442 2455678889 9999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.+++++|+.||+||+|+||||+++|+.|+++++
T Consensus 168 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa 247 (506)
T 3rh9_A 168 LSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA 247 (506)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5678899999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+++
T Consensus 248 ~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 326 (506)
T 3rh9_A 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRI-FVHEKVADAFGQKLAERVNKMTVGDGMNDG 326 (506)
T ss_dssp TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEE-EEETTTHHHHHHHHHHHHHHCCBSCTTSTT
T ss_pred hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEE-EEcHHHHHHHHHHHHHHHHhccCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e----------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K---------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~---------------------------------------- 379 (445)
+++|||+++++++++.++|++++++||++++||... .
T Consensus 327 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 406 (506)
T 3rh9_A 327 IDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVI 406 (506)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHH
Confidence 999999999999999999999999999999999631 0
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++||++||+.|+|++.
T Consensus 407 ~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~K~v~~~ 483 (506)
T 3rh9_A 407 DAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGP-TPEAPFGGMKASGIG--REGGLEGLFEFVEAQTVPRG 483 (506)
T ss_dssp HHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHTTTEEEEEEEEC
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCccCcCcCcCC--cCccHHHHHHhcceEEEEEc
Confidence 999997665 467999999999999 67999999999999999875
Q ss_pred c
Q psy10608 427 W 427 (445)
Q Consensus 427 ~ 427 (445)
.
T Consensus 484 ~ 484 (506)
T 3rh9_A 484 F 484 (506)
T ss_dssp -
T ss_pred C
Confidence 4
No 8
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=8.9e-88 Score=702.98 Aligned_cols=399 Identities=30% Similarity=0.426 Sum_probs=374.8
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHh
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKAN 105 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 105 (445)
.+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 88 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIREN 88 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 44667899999999988888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 106 MKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
+++|++++++|+|||..+++.|+..+++.++|++...+...+...+....+...++.++|+|||++|+|||||+.+.+++
T Consensus 89 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 168 (497)
T 3k2w_A 89 KHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRK 168 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999888777665542234567789999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.++
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa 248 (497)
T 3k2w_A 169 IGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA 248 (497)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+++
T Consensus 249 ~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~vg~p~~~~ 327 (497)
T 3k2w_A 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERL-YVHASVYDEFMAKFLPLVKGLKVGDPMDAD 327 (497)
T ss_dssp TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEE-EEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEE-EEeHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--c----e-------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN--L----K------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~--~----~------------------------------------- 379 (445)
+++||++++++++++.++|++++++||++++||.. . .
T Consensus 328 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 407 (497)
T 3k2w_A 328 SQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSME 407 (497)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHH
Confidence 99999999999999999999999999999999962 0 0
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++.... +.+||||+|+||+| +++|++||++||+.|+|
T Consensus 408 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~-~~~PfGG~k~SG~G--~~~G~~gl~~ft~~k~v 484 (497)
T 3k2w_A 408 QAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQ-HQGFHNGWKQSGFG--GEDGKFGLEQYLEKKTV 484 (497)
T ss_dssp HHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-TTSCBCCEETSEES--CBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCC-CCCCcCCcCCCcCC--ccchHHHHHHhcceEEE
Confidence 9999976654 78999999999999 67999999999999999
Q ss_pred Eeecc
Q psy10608 424 TQLWR 428 (445)
Q Consensus 424 ~~~~~ 428 (445)
++++.
T Consensus 485 ~~~~~ 489 (497)
T 3k2w_A 485 YINEA 489 (497)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 98753
No 9
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=2e-87 Score=701.34 Aligned_cols=400 Identities=29% Similarity=0.456 Sum_probs=372.1
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh-----hhcCCCHHHHHHHHHHHHH
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE-----TWSKTSIITRQQVLFRLQN 100 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~ 100 (445)
.++..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++
T Consensus 4 ~~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~ 83 (503)
T 3iwj_A 4 PIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAA 83 (503)
T ss_dssp CCCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHH
T ss_pred CCCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHH
Confidence 35566899999999988888999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccc-c--ccCCCCceeEEEecCCeEEEECCCCc
Q psy10608 101 IIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETL-A--GVAKDMDIHSYRVPLGVTAGITPFNF 177 (445)
Q Consensus 101 ~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~I~p~N~ 177 (445)
.|++++++|++++++|+|||..+++.|+..+++.++||+...+.+.+... + ....+...++.++|+|||++|+||||
T Consensus 84 ~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 84 KVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 99999999999999999999999999999999999999988776654431 1 11134567899999999999999999
Q ss_pred chhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHH
Q psy10608 178 PAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAG 256 (445)
Q Consensus 178 P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g 256 (445)
|+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+ .+.++.|+.||+|++|+||||+++|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 999999999999999999999999999999999999999999999999999995 5788999999999999999999999
Q ss_pred HHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhcc
Q psy10608 257 KYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALK 334 (445)
Q Consensus 257 ~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~ 334 (445)
+.|++.+++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|++++++++
T Consensus 244 ~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL-ILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEE-EEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCee-EEcHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999999 7777 6999999999999999
Q ss_pred ccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----e-------------------------------
Q psy10608 335 VSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL----K------------------------------- 379 (445)
Q Consensus 335 vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~----~------------------------------- 379 (445)
+|||.++++++|||+++++++++.++|++++++||++++||... .
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 99999999999999999999999999999999999999998531 0
Q ss_pred ------------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHh
Q psy10608 380 ------------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFY 417 (445)
Q Consensus 380 ------------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~ 417 (445)
|+||++... .+.+||||+|+||+| +++|++|+++|
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~g~~~f 479 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPC-FTQAPWGGVKRSGFG--RELGEWGLDNY 479 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCC-CTTSCBCCSGGGEEC--CBSHHHHHHTT
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCcCCcCcccCC--CcchHHHHHHh
Confidence 999987544 478999999999999 67999999999
Q ss_pred heeEEEEeeccc
Q psy10608 418 TETKTVTQLWRE 429 (445)
Q Consensus 418 ~~~k~v~~~~~~ 429 (445)
++.|+|++....
T Consensus 480 ~~~k~v~~~~~~ 491 (503)
T 3iwj_A 480 LSVKQVTQYISE 491 (503)
T ss_dssp EEEEEEEEECCS
T ss_pred hCeEEEEEeCCC
Confidence 999999987643
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=3e-87 Score=702.31 Aligned_cols=397 Identities=29% Similarity=0.440 Sum_probs=373.2
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHh--hhhcCCCHHHHHHHHHHHHHHHHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAY--ETWSKTSIITRQQVLFRLQNIIKA 104 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~ 104 (445)
...++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|+++++.|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHH
Confidence 456899999999988888999999999 99999999999999999999999999 889999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHh
Q psy10608 105 NMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 105 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 184 (445)
++++|++++++|+|||..+++.|+..+++.++|+++..+...++..+....+...++.++|+|||++|+|||||+.+.++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999999889999999999999888777665554222456688999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 260 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 678899999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++
T Consensus 261 a~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 339 (528)
T 3u4j_A 261 ARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRL-LVQEGIRDALMERLLDISRKVAFGDPLNE 339 (528)
T ss_dssp HTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEGGGHHHHHHHHHHHHHHCCEECTTST
T ss_pred HhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEE-EEechHHHHHHHHHHHHHHhhcCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e---------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K--------------------------------------- 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~--------------------------------------- 379 (445)
++++||++++++++++.++|++++++||++++||... .
T Consensus 340 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 419 (528)
T 3u4j_A 340 RTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA 419 (528)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHH
Confidence 9999999999999999999999999999999998531 0
Q ss_pred ----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++... .+.+||||+|+||+| +++|++||++||+.|+|++
T Consensus 420 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~ 496 (528)
T 3u4j_A 420 VALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG-TPELPIGGYKKSGLG--RELGRYGFDEYSQFKGVHV 496 (528)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSTTHHHHHTEEEEEEEE
T ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCcCCcCcCCCC--cCchHHHHHHhhceEEEEE
Confidence 999987654 578999999999999 6799999999999999998
Q ss_pred ecc
Q psy10608 426 LWR 428 (445)
Q Consensus 426 ~~~ 428 (445)
...
T Consensus 497 ~~~ 499 (528)
T 3u4j_A 497 TLG 499 (528)
T ss_dssp ESS
T ss_pred eCC
Confidence 764
No 11
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=2.6e-87 Score=701.14 Aligned_cols=394 Identities=28% Similarity=0.441 Sum_probs=367.6
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|..+|.++|+++++.|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999999876678899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCcccccc---CCCCceeEEEecCCeEEEECCCCcchhhhH
Q psy10608 108 QLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGV---AKDMDIHSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
+|++++++|+|||+.+++ .|+..+++.++||++..+.+.++..+.. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 7999999999999988877766554421 222356899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHH
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYER 262 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 262 (445)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+++++|+.||+|++|+||||+++|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 45788999999999999999999999999999
Q ss_pred hh-cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 263 GA-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 263 aa-~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
++ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||+
T Consensus 277 aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~vGdp~ 355 (517)
T 2o2p_A 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRL-FVEESIHNQFVQKVVEEVEKMKIGNPL 355 (517)
T ss_dssp HHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred hHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEE-EEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 99 8999999999999999999999999999999999999999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e-------------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K------------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~------------------------------------- 379 (445)
++++++|||+++++++++.++|++++++||++++||... .
T Consensus 356 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~ 435 (517)
T 2o2p_A 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDV 435 (517)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCH
Confidence 999999999999999999999999999999999998531 0
Q ss_pred -------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 -------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
||||++... .+.+||||+|+||+| +++|++||++|++.|+
T Consensus 436 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--r~~G~~~l~~~~~~k~ 512 (517)
T 2o2p_A 436 DAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKT-DVAAPFGGFKQSGFG--KDLGEAALNEYLRIKT 512 (517)
T ss_dssp HHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCCGGGEEC--CBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCC-CCCCCcCCcCcCCcC--ccChHHHHHHhCCceE
Confidence 999986544 468999999999999 6799999999999999
Q ss_pred EEeec
Q psy10608 423 VTQLW 427 (445)
Q Consensus 423 v~~~~ 427 (445)
|+++|
T Consensus 513 v~~~~ 517 (517)
T 2o2p_A 513 VTFEY 517 (517)
T ss_dssp EEEEC
T ss_pred EEeeC
Confidence 98754
No 12
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=3.8e-87 Score=698.59 Aligned_cols=395 Identities=28% Similarity=0.447 Sum_probs=367.6
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999998878899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccC-C----CCceeEEEecCCeEEEECCCCcchhhh
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVA-K----DMDIHSYRVPLGVTAGITPFNFPAMIP 182 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~I~p~N~P~~~~ 182 (445)
+|++++++|+|||..+++.|+..+++.++||++..+...++..+... + +...++.++|+|||++|+|||||+.+.
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999887766665443211 2 345688999999999999999999999
Q ss_pred HhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHH
Q psy10608 183 LWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYE 261 (445)
Q Consensus 183 ~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 261 (445)
++++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 249 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE 249 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 5678899999999999999999999999999
Q ss_pred HhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 262 RGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 262 ~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|||.
T Consensus 250 ~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~ 326 (505)
T 3prl_A 250 KAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRV-FVQDSVADQLVANIKELVEQLTVGSPE 326 (505)
T ss_dssp HCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEE-EEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceE-EEeHHHHHHHHHHHHHHHHhcccCCCC
Confidence 987 89999999999999999999999999999999999999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------- 379 (445)
+++++||++++++++++.++|++++++||++++||....
T Consensus 327 -~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~ 405 (505)
T 3prl_A 327 -DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAIS 405 (505)
T ss_dssp -TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred -CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999985210
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++.....+.+||||+|+||+| +++|++||++||+.|+|++++
T Consensus 406 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~G--r~~g~~~~~~f~~~k~v~~~~ 483 (505)
T 3prl_A 406 LSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLG--VQGIKPSLLSMTRERVTVLNL 483 (505)
T ss_dssp HHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEES--CBSHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCC--cCccHHHHHHhhceEEEEEeC
Confidence 9999876534578999999999999 679999999999999999876
Q ss_pred c
Q psy10608 428 R 428 (445)
Q Consensus 428 ~ 428 (445)
.
T Consensus 484 ~ 484 (505)
T 3prl_A 484 A 484 (505)
T ss_dssp -
T ss_pred C
Confidence 4
No 13
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=4.1e-87 Score=698.45 Aligned_cols=396 Identities=30% Similarity=0.461 Sum_probs=370.0
Q ss_pred cccceeecCEeeeCCCCCe-EEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 28 ATTKLYIDGKFVESKATDW-IDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~-~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
...++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 97 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERR 97 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 4467899999998777778 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
++|++++++|+|||..+++.|+..+++.++||++..+...++..+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 98 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 176 (503)
T 1a4s_A 98 DNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKC 176 (503)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999988877666544422 34467889999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 177 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 256 (503)
T 1a4s_A 177 APALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT 256 (503)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999448889999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTD 344 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~ 344 (445)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|.++++++++|||.+++++
T Consensus 257 ~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 335 (503)
T 1a4s_A 257 VKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRV-FVQREIMPQFLEEVVKRTKAIVVGDPLLTETR 335 (503)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred CCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEE-EEehHHHHHHHHHHHHHHHhcCCCCCcccCCc
Confidence 99999999999999999999999999999999999999999999999 7777 69999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---------e------------------------------------
Q psy10608 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---------K------------------------------------ 379 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---------~------------------------------------ 379 (445)
+|||+++++++++.++|++++++|+++++||... .
T Consensus 336 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (503)
T 1a4s_A 336 MGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEE 415 (503)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHH
Confidence 9999999999999999999999999999988531 1
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++... .+.+||||+|+||+| +++|++||++|++.|+|
T Consensus 416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~~l~~f~~~k~v 492 (503)
T 1a4s_A 416 EVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSIS-PVEVPFGGYKMSGFG--RENGQATVDYYSQLKTV 492 (503)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCC-CTTSCBCCSGGGEEC--CBSTTGGGGGSEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCC-CCCCCCCCcCCCCCC--ccchHHHHHHhcCceEE
Confidence 999987654 467999999999999 67999999999999999
Q ss_pred Eeecc
Q psy10608 424 TQLWR 428 (445)
Q Consensus 424 ~~~~~ 428 (445)
++++.
T Consensus 493 ~~~~~ 497 (503)
T 1a4s_A 493 IVEMG 497 (503)
T ss_dssp EECCS
T ss_pred EEccC
Confidence 98653
No 14
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=6.2e-87 Score=695.23 Aligned_cols=402 Identities=45% Similarity=0.789 Sum_probs=372.3
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 4 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (486)
T 1t90_A 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKE 83 (486)
T ss_dssp CBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999987777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||..+++.|+..+++.++|++++.+++.++..+....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 84 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 163 (486)
T 1t90_A 84 ELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFP 163 (486)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999877776665443222345668899999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
+||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+.+.++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 164 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~ 243 (486)
T 1t90_A 164 MAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENL 243 (486)
T ss_dssp HHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccce-EEEecc-cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALST-VIFVGE-AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~r-vi~V~~-~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++| + +||+ +|+|+++|+++++++++|+|.++++++
T Consensus 244 ~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv-~v~~~~d~f~~~l~~~~~~~~vG~~~~~~~~~ 322 (486)
T 1t90_A 244 KRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVT-VEEGIADEFMAKLQEKVADIKIGNGLDDGVFL 322 (486)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEE-EEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCB
T ss_pred CcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeE-EecCCHHHHHHHHHHHHHhcccCCCCccCCcc
Confidence 999999999999999999999999999999999999999999999 6 7777 799999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------------e---------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNL-------------K--------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-------------~--------------------------------- 379 (445)
||++++++++++.++|++++++|+++++||... .
T Consensus 323 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~a 402 (486)
T 1t90_A 323 GPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIA 402 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999998510 0
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeeccc
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRE 429 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~ 429 (445)
|+||++.....+.+||||+|+||+|..|++|++|+++|++.|+|+.++..
T Consensus 403 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~~~ 482 (486)
T 1t90_A 403 NKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARYPA 482 (486)
T ss_dssp HHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEECCC
T ss_pred hCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEecCC
Confidence 99998654444679999999999995456999999999999999987643
Q ss_pred c
Q psy10608 430 S 430 (445)
Q Consensus 430 ~ 430 (445)
|
T Consensus 483 ~ 483 (486)
T 1t90_A 483 P 483 (486)
T ss_dssp C
T ss_pred C
Confidence 3
No 15
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=8.8e-87 Score=695.19 Aligned_cols=394 Identities=31% Similarity=0.483 Sum_probs=368.2
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHHHHHHHHHHh
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE---TWSKTSIITRQQVLFRLQNIIKAN 105 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 105 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 34689999999877778999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHh
Q psy10608 106 MKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 184 (445)
+++|++++++|+|||..++. .|+..+++.++||++..+.+.++..+. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 178 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 178 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHH
Confidence 99999999999999999875 599999999999998877776654442 3344568899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 179 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~a 258 (501)
T 1bxs_A 179 KIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAA 258 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 667899999999999999999999999999999
Q ss_pred h-cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC
Q psy10608 264 A-KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV 340 (445)
Q Consensus 264 a-~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~ 340 (445)
+ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|||.|
T Consensus 259 a~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~ 337 (501)
T 1bxs_A 259 GKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRL-FVEESIYDEFVRRSVERAKKYVLGNPLT 337 (501)
T ss_dssp HHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEE-EEEHHHHHHHHHHHHHHHTCCCBSCTTS
T ss_pred hhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEE-EEchhHHHHHHHHHHHHHHhcCCCCCcc
Confidence 9 9999999999999999999999999999999999999999999999999 7777 6999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e--------------------------------------
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K-------------------------------------- 379 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~-------------------------------------- 379 (445)
+++++|||+++++++++.++|++++++|+++++||... .
T Consensus 338 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 417 (501)
T 1bxs_A 338 PGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDV 417 (501)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred cCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHH
Confidence 99999999999999999999999999999999998631 0
Q ss_pred ----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++... .+.+||||+|.||+| +++|++|+++|++.|+|++
T Consensus 418 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~pfGG~k~SG~G--~~~G~~~l~~f~~~K~v~~ 494 (501)
T 1bxs_A 418 IKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV-SAQCPFGGFKMSGNG--RELGEYGFHEYTEVKTVTI 494 (501)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC-CCCCCCCCcCcCCcC--ccchHHHHHHhhCeeEEEE
Confidence 999987544 478999999999999 6799999999999999987
Q ss_pred ec
Q psy10608 426 LW 427 (445)
Q Consensus 426 ~~ 427 (445)
.+
T Consensus 495 ~~ 496 (501)
T 1bxs_A 495 KI 496 (501)
T ss_dssp EC
T ss_pred cc
Confidence 64
No 16
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=9e-87 Score=693.56 Aligned_cols=394 Identities=29% Similarity=0.463 Sum_probs=370.7
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44689999999988888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||+.......+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998877666655443334566789999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~ 248 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999 5678999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
+|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++
T Consensus 249 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 327 (481)
T 3jz4_A 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRL-YVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTI 327 (481)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEE-EEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCB
T ss_pred CceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEE-EEeHHHHHHHHHHHHHHHHhccCCCCccCcCcc
Confidence 9999999999999999999999999999999999999999999999 7777 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----e-----------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNL-----K----------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-----~----------------------------------------- 379 (445)
||++++++++++.++|++++++||++++||... .
T Consensus 328 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 407 (481)
T 3jz4_A 328 GPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQAN 407 (481)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHh
Confidence 999999999999999999999999999999531 0
Q ss_pred -----------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 -----------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 -----------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
||||++... .+.+||||+|+||+| +++|++|+++||+.|+|++.
T Consensus 408 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 408 DTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS-NEVAPFGGIKASGLG--REGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp CSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCC-CSSSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEEE
T ss_pred cCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCC-CCCCCcCCcccCcCC--CCchHHHHHHhhceeEEEEe
Confidence 999987654 478999999999999 67999999999999999864
No 17
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.5e-87 Score=701.25 Aligned_cols=393 Identities=31% Similarity=0.467 Sum_probs=370.1
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 92 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND 92 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCccc----ccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTI----MQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
+|++++++|+|||..++ |+..+++.++||++..+. +.++..+ ...+. .++.++|+|||++|+|||||+.+.+
T Consensus 93 ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~-~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~ 168 (517)
T 3r31_A 93 ALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIP-LGGDF-AYTKRVPLGVCVGIGAWNYPQQIAC 168 (517)
T ss_dssp HHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEE-CSSSE-EEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCcccc-cCCCc-ceEEEcCccEEEEECCCcchHHHHH
Confidence 99999999999999998 999999999999988776 6666554 23344 8899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+.++++.|+.||+||+|+||||+++|+.|++.+
T Consensus 169 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 248 (517)
T 3r31_A 169 WKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.++
T Consensus 249 a~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 327 (517)
T 3r31_A 249 AGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRV-FVQKKAKARFLENLKRRTEAMILGDPLDY 327 (517)
T ss_dssp HHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEE-EEEGGGHHHHHHHHHHHHHHCCBCCTTST
T ss_pred hcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceE-EEeHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc-c-----ce------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR-N-----LK------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~-~-----~~------------------------------------ 379 (445)
++++|||+++++++++.++|++++++||++++||. . ..
T Consensus 328 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 407 (517)
T 3r31_A 328 ATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDED 407 (517)
T ss_dssp TCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHH
T ss_pred CCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHH
Confidence 99999999999999999999999999999999983 0 00
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++... .+.+||||+|+||+| +++|++||++||+.|+|
T Consensus 408 eAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v 484 (517)
T 3r31_A 408 EVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLC-PVEIPFGGSKQSGFG--RENSAAALEHYSELKTV 484 (517)
T ss_dssp HHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCC-CTTSCBCCEETTEEC--CBSTGGGGGGSEEEEEE
T ss_pred HHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCcCCcCcCCCC--cCchHHHHHHhhceEEE
Confidence 999997654 478999999999999 67999999999999999
Q ss_pred Eeecc
Q psy10608 424 TQLWR 428 (445)
Q Consensus 424 ~~~~~ 428 (445)
++...
T Consensus 485 ~~~~~ 489 (517)
T 3r31_A 485 YVSTG 489 (517)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 98664
No 18
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-86 Score=693.55 Aligned_cols=394 Identities=25% Similarity=0.395 Sum_probs=369.3
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE--TWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999877778899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++ .|+..+++.++||++..+.+.++..+ ...+...++.++|+|||++|+|||||+.+.+++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETR-TGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEE-EETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-CCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 9999999999999999998 89999999999999988877766544 222345689999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 265 (445)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+.+.+++|+.||+||+|+||||+.+|+.|++.+++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999977889999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCC
Q psy10608 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGT 343 (445)
Q Consensus 266 ~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~ 343 (445)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.++++
T Consensus 247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 325 (495)
T 3b4w_A 247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRI-LAPRSRYDEIVAAVTNFVTALPVGPPSDPAA 325 (495)
T ss_dssp TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEGGGHHHHHHHHHHHHHHSCBCCTTCTTC
T ss_pred cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEE-EEcccHHHHHHHHHHHHHHhcCCCCCccCCC
Confidence 999999999999999999999999999999999999999999999999 7777 6999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-----e---------------------------------------
Q psy10608 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL-----K--------------------------------------- 379 (445)
Q Consensus 344 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~-----~--------------------------------------- 379 (445)
++|||+++++++++.++|++++++|+++++||... .
T Consensus 326 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 405 (495)
T 3b4w_A 326 QIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAI 405 (495)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHH
Confidence 99999999999999999999999999999988520 0
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++. . .+.+||||+|+||+| +++|++||++|++.|+|++.
T Consensus 406 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~-~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~k~v~~~ 481 (495)
T 3b4w_A 406 AIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-F-DPGSPFGGYKNSGIG--RENGPEGVEHFTQQKSVLLP 481 (495)
T ss_dssp HHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-C-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEECC
T ss_pred HHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-C-CCCCCCCCCCCCCcC--ccchHHHHHHhcceeEEEEc
Confidence 9999876 4 478999999999999 67999999999999999976
Q ss_pred cc
Q psy10608 427 WR 428 (445)
Q Consensus 427 ~~ 428 (445)
+.
T Consensus 482 ~~ 483 (495)
T 3b4w_A 482 MG 483 (495)
T ss_dssp TT
T ss_pred cC
Confidence 53
No 19
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.3e-86 Score=693.47 Aligned_cols=395 Identities=29% Similarity=0.460 Sum_probs=370.1
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||++..+...++.++....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 185 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP 185 (515)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhH
Confidence 99999999999999999999999999999999887776665442233456788999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|+ .++++.|+.||+||+|+||||+.+|+.|++.+++++
T Consensus 186 ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l 265 (515)
T 2d4e_A 186 ALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHL 265 (515)
T ss_dssp HHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGT
T ss_pred HHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999994 678899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDL 345 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~ 345 (445)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++++
T Consensus 266 ~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 344 (515)
T 2d4e_A 266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRL-LVEEKIFEDFVGKVVERARAIRVGHPLDPETEV 344 (515)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEE-EEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSB
T ss_pred CceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEE-EEehhHHHHHHHHHHHHHhhcccCCcccccCcc
Confidence 9999999999999999999999999999999999999999999999 7777 699999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc-c---------e------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRN-L---------K------------------------------------ 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~-~---------~------------------------------------ 379 (445)
|||+++++++++.++|++++++||++++||.. . .
T Consensus 345 gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~~~~~~i~~eEiFGPVl~v~~~~~~d 424 (515)
T 2d4e_A 345 GPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPFKDEE 424 (515)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEECCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeCCCCChhhhccccCCceEEEeeCCHH
Confidence 99999999999999999999999999998852 0 0
Q ss_pred ------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEE
Q psy10608 380 ------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTV 423 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v 423 (445)
|+||++... .+.+||||+|+||+| +++|++|+++|++.|+|
T Consensus 425 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~K~v 501 (515)
T 2d4e_A 425 EALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVR-HLPTPFGGVKGSGDR--REGGTYALDFYTDLKTI 501 (515)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCC-CTTSCBCCSGGGBCS--CBSHHHHHHHHEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCCCCcCCCCCC--ccchHHHHHHhCceeEE
Confidence 999986543 478999999999999 67999999999999999
Q ss_pred Eeec
Q psy10608 424 TQLW 427 (445)
Q Consensus 424 ~~~~ 427 (445)
++.+
T Consensus 502 ~~~~ 505 (515)
T 2d4e_A 502 ALPL 505 (515)
T ss_dssp EEES
T ss_pred EEcC
Confidence 9875
No 20
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=2.5e-86 Score=689.95 Aligned_cols=394 Identities=28% Similarity=0.426 Sum_probs=368.2
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASE 85 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999877778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPV 188 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 188 (445)
|++++++|+|||..+++.|+..+++.++||++..+...+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 165 (479)
T 2imp_A 86 ISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAP 165 (479)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999998887766655442223446789999999999999999999999999999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCC
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNG 267 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~ 267 (445)
||++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 166 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~ 245 (479)
T 2imp_A 166 ALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNI 245 (479)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999995 567899999999999999999999999999999999
Q ss_pred CcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC-CCCC
Q psy10608 268 KRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV-PGTD 344 (445)
Q Consensus 268 ~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~-~~~~ 344 (445)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.+ ++++
T Consensus 246 ~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 324 (479)
T 2imp_A 246 TKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERV-YVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIA 324 (479)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCS
T ss_pred CcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEE-EEehhhHHHHHHHHHHHHHhcccCCccccCCCc
Confidence 9999999999999999999999999999999999999999999999 7777 6999999999999999999999 9999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e------------------------------------------
Q psy10608 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K------------------------------------------ 379 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~------------------------------------------ 379 (445)
+|||+++.+++++.++|++++++|+++++||... .
T Consensus 325 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~a 404 (479)
T 2imp_A 325 MGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMA 404 (479)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHH
Confidence 9999999999999999999999999999988631 0
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++||++|++.|+|+++
T Consensus 405 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 405 NDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGFHAGWRKSGIG--GADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC-CTTSCBCCEETTEES--CBSHHHHHHTTEEEEEEEEE
T ss_pred hcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC-CCCCCCCCCCCCCCC--CCchHHHHHHhcCeeEEEec
Confidence 999987655 478999999999999 67999999999999999864
No 21
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=2.6e-86 Score=690.66 Aligned_cols=394 Identities=26% Similarity=0.403 Sum_probs=366.8
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 21 ~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 21 LMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp -CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34457899999998766 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++. |+..+++.++||++..+...++..+...++...++.++|+|||++|+|||||+.+.+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 99999999999999999998 99999999999998877766655442213445688999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|+++..|++++.++ +|+|+||+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 99999999999 6678999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|||.+++
T Consensus 259 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 259 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRI-YAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEE-EEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEE-EecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 9999999999999999999999999999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcC-CEEEeCCc-cc--e---------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEG-ATLLLDGR-NL--K--------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~G-a~~~~GG~-~~--~--------------------------------------- 379 (445)
+++|||+++++++++.++|++++++| +++++||. .. .
T Consensus 338 ~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 417 (495)
T 1wnd_A 338 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVV 417 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHH
Confidence 99999999999999999999999999 99999986 21 0
Q ss_pred ---------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 ---------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 ---------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++||++|++.|+|+++
T Consensus 418 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 418 NWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC-CTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCCCcCcCC--ccchHHHHHHhhCeEEEEec
Confidence 999986544 478999999999999 67999999999999999864
No 22
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=3e-86 Score=690.57 Aligned_cols=389 Identities=28% Similarity=0.403 Sum_probs=360.3
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.+
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 103 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSS 103 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEE-EecCCeEEEECCCCcchhhhHhH
Q psy10608 108 QLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSY-RVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
+|++++++|+|||+.+++ .|+..+++.++|++............ ..+...++. ++|+|||++|+|||||+.+.+++
T Consensus 104 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (497)
T 3i44_A 104 DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL--IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES--STTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--cCCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence 999999999999999999 79999999999998754433221111 123446778 99999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa 261 (497)
T 3i44_A 182 VIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS 261 (497)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 5688999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++||+++|||||||+||++||| |.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.|++
T Consensus 262 ~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~vG~p~~~~ 339 (497)
T 3i44_A 262 NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRM-LVEQAIYDKAIKTAKDIAEKTQVGPGHQTG 339 (497)
T ss_dssp TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEE-EEEGGGHHHHHHHHHHHHHHCCBCCTTSCS
T ss_pred hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEE-EEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 99999999999999999999999 9999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc-c-------ce-----------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGR-N-------LK----------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~-~-------~~----------------------------------- 379 (445)
+++|||+++++++++.++|++++++||++++||. . ..
T Consensus 340 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 419 (497)
T 3i44_A 340 NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDE 419 (497)
T ss_dssp SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHH
Confidence 9999999999999999999999999999999993 1 00
Q ss_pred -----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
||||. .. ..+.+||||+|+||+| +++|++||++||+.|+|+
T Consensus 420 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 420 AVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HE-LPGGSYFGGVKFSGRA--REGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CC-CCTTCCBCCSGGGCCC--CBSHHHHHHTTEEEEEES
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CC-CCCCCCcCCcCcCcCC--ccchHHHHHHhcceeEEE
Confidence 99994 33 3478999999999999 679999999999999985
No 23
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=2.9e-86 Score=691.12 Aligned_cols=392 Identities=29% Similarity=0.411 Sum_probs=367.1
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE---TWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++|++
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 589999999887778999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 108 QLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
+|++++++|+|||..++. .|+..+++.++||++..+...++..+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 999999999999999875 599999999999998877666654442 334456889999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh-
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA- 264 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa- 264 (445)
++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.++
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999 6778999999999999999999999999999999
Q ss_pred cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCC
Q psy10608 265 KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPG 342 (445)
Q Consensus 265 ~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~ 342 (445)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.|++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 338 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRT-FVQEDIYDEFVERSVARAKSRVVGNPFDSK 338 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEE-EEehhHHHHHHHHHHHHHHhCcCCCccccc
Confidence 9999999999999999999999999999999999999999999999999 7777 699999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e----------------------------------------
Q psy10608 343 TDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K---------------------------------------- 379 (445)
Q Consensus 343 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~---------------------------------------- 379 (445)
+++|||+++++++++.++|++++++|+++++||... .
T Consensus 339 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 418 (500)
T 1o04_A 339 TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVG 418 (500)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHH
Confidence 999999999999999999999999999999998631 0
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++... .+.+||||+|.||+| +++|++|+++|++.|+|++.+
T Consensus 419 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 419 RANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF-GAQSPFGGYKMSGSG--RELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCSGGGEES--CBSTGGGGGGGEEEEEEEEEC
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCCCCcCCCCCC--ccchHHHHHHhcceEEEEEec
Confidence 999987544 478999999999999 679999999999999998764
No 24
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=7.9e-86 Score=688.27 Aligned_cols=397 Identities=30% Similarity=0.484 Sum_probs=373.4
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
|...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2ve5_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45568999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEG-DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++. |+..+++.++||++..+.+.+...+ ...+...++.++|+|||++|+|||||+.+.+++
T Consensus 84 ~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 162 (490)
T 2ve5_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEE-EETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceeeEeeccccEEEEECCCcchHHHHHHH
Confidence 99999999999999999997 9999999999999888777665544 234566789999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh-
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG- 263 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a- 263 (445)
+++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.+.++.|+.||+||+|+||||+++|+.|++.+
T Consensus 163 ~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~ 242 (490)
T 2ve5_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhch
Confidence 999999999999999999999999999999999999999999999 678899999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.|+
T Consensus 243 a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~d~ 321 (490)
T 2ve5_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRV-FIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeE-EEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999 7777 59999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------e------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL------K------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~------~------------------------------------ 379 (445)
++++||++++++++++.++|++++++||++++||... .
T Consensus 322 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~ 401 (490)
T 2ve5_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCH
Confidence 9999999999999999999999999999999998641 0
Q ss_pred -------------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 -------------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
|+||++... .+.+||||+|+||+| +++|++|+++|++.|+
T Consensus 402 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~pfGG~k~SG~G--~~~G~~~~~~f~~~k~ 478 (490)
T 2ve5_A 402 DEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGES-PAEMPVGGYKQSGVG--RENGLTTLAHYTRIKS 478 (490)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCCCCCCCC--CcchHHHHHHhheeEE
Confidence 999987654 478999999999999 6799999999999999
Q ss_pred EEeecc
Q psy10608 423 VTQLWR 428 (445)
Q Consensus 423 v~~~~~ 428 (445)
|+++..
T Consensus 479 v~~~~~ 484 (490)
T 2ve5_A 479 VQVELG 484 (490)
T ss_dssp EEEECS
T ss_pred EEEccC
Confidence 998753
No 25
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=6.4e-86 Score=693.68 Aligned_cols=394 Identities=29% Similarity=0.426 Sum_probs=367.9
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
...++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRK 113 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3567999999997 568899999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccC-cccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSI-PTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++.|+..+++.++||++. .+++.++..+. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 192 (538)
T 3qan_A 114 HEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILS-RPGEQNRYFYTPMGVTVTISPWNFALAIMVGT 192 (538)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCC-CTTEEEEEEEEECCEEEEECCSTTTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-cCCcceeeecCCCcEEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999988 66676665542 23567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.++
T Consensus 193 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 272 (538)
T 3qan_A 193 AVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272 (538)
T ss_dssp HHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999999
Q ss_pred cC------CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhcccc
Q psy10608 265 KN------GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVS 336 (445)
Q Consensus 265 ~~------~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG 336 (445)
++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|
T Consensus 273 ~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~vG 351 (538)
T 3qan_A 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRA-VIHKDVYDEVLEKTVALAKNLTVG 351 (538)
T ss_dssp SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEE-EEETTTHHHHHHHHHHHHTTCCBS
T ss_pred hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCcee-EEehHHHHHHHHHHHHHHHhccCC
Confidence 88 99999999999999999999999999999999999999999999999 7777 699999999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce-------------------------------------
Q psy10608 337 AGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------- 379 (445)
Q Consensus 337 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------- 379 (445)
||.++++++||++++++++++.++|++++++| ++++||....
T Consensus 352 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 430 (538)
T 3qan_A 352 DPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAND 430 (538)
T ss_dssp CTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCC
Confidence 99999999999999999999999999999999 9999985310
Q ss_pred --------------------------------------EEEe-CCCCCCCCCCccCCCCCCccC-CCCcchHHHHHHhhe
Q psy10608 380 --------------------------------------VGIN-VPIPVPLSMFSFTGSRGSFLG-ENHFYGKQGFYFYTE 419 (445)
Q Consensus 380 --------------------------------------V~iN-~~~~~~~~~~pfGG~k~SG~G-~~~~~g~~~l~~~~~ 419 (445)
|+|| .++....+.+||||+|+||+| + ++|++||++|++
T Consensus 431 ~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~--~~G~~gl~~ft~ 508 (538)
T 3qan_A 431 FDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSK--AGGPDYLALHMQ 508 (538)
T ss_dssp HHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCC--BTSTTTGGGGEE
T ss_pred HHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcc--cccHHHHHHhhC
Confidence 9999 555443578999999999999 6 599999999999
Q ss_pred eEEEEeecc
Q psy10608 420 TKTVTQLWR 428 (445)
Q Consensus 420 ~k~v~~~~~ 428 (445)
.|+|++++.
T Consensus 509 ~k~v~~~~~ 517 (538)
T 3qan_A 509 AKTVSEMYA 517 (538)
T ss_dssp EEEEEEEC-
T ss_pred eEEEEEecC
Confidence 999998764
No 26
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.4e-85 Score=688.02 Aligned_cols=399 Identities=26% Similarity=0.395 Sum_probs=357.1
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHR 89 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhH
Confidence 45668999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccccc-CCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGV-AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||..+++.|+..+++.++|++...+...+ ..+.. .++...++.++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (508)
T 3r64_A 90 EEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRS 168 (508)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 99999999999999999999999999999999998877666 44422 23467889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHH-HHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGAC-MMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~-~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++||++||+||+|||+.+|.++ .+|++++.++|+|+|+||+|+|+ .+.++.|+.||+||+|+||||+++|+.|++.+
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a 248 (508)
T 3r64_A 169 VAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELA 248 (508)
T ss_dssp HHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999 99999999999999999999995 78899999999999999999999999999999
Q ss_pred hc--CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCC
Q psy10608 264 AK--NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGN 339 (445)
Q Consensus 264 a~--~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~ 339 (445)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.
T Consensus 249 a~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~ 327 (508)
T 3r64_A 249 INGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRV-IVDAAVHDEFLEKFVEAVKNIPTGDPS 327 (508)
T ss_dssp HSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEE-EEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred hcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEE-EEehhHHHHHHHHHHHHHHhccCCCCc
Confidence 98 899999999999999999999999999999999999999999999999 7777 699999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------
Q psy10608 340 VPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------- 379 (445)
Q Consensus 340 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------- 379 (445)
++++++|||+++++++++.++|++++++|+++++||....
T Consensus 328 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (508)
T 3r64_A 328 AEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAE 407 (508)
T ss_dssp SSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred cCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999999985310
Q ss_pred --------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 --------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 --------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++.....+.+||||+|+||+| +++|++|+++||+.|+|++++
T Consensus 408 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~G--r~~G~~~l~~ft~~k~v~~~~ 485 (508)
T 3r64_A 408 LANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLG--RFNGDWAIEEFTTDRWIGIKR 485 (508)
T ss_dssp HHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC----------------------CCCHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCC--cCccHHHHHHhhceEEEEEec
Confidence 9999876443578999999999999 569999999999999999876
Q ss_pred cc
Q psy10608 428 RE 429 (445)
Q Consensus 428 ~~ 429 (445)
.+
T Consensus 486 ~~ 487 (508)
T 3r64_A 486 SA 487 (508)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 27
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=9.9e-86 Score=686.72 Aligned_cols=398 Identities=25% Similarity=0.379 Sum_probs=350.9
Q ss_pred ccccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q psy10608 27 IATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANM 106 (445)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (445)
+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 45568999999998888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccccc-CCCCceeEEEecCCeEEEECCCCcchhhhHhH
Q psy10608 107 KQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGV-AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWM 185 (445)
Q Consensus 107 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 185 (445)
++|++++++|+|||+.+++.|+..+++.++|+++..+++.+...+.. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRS 163 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998877776654422 23466789999999999999999999999999
Q ss_pred HHHHhhcCCEEEEeCCCCChHHH-HHHHHHHHHcCCCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 186 FPVAIACGNTHVIKPSERDPGAC-MMLVDMLTQAGCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~-~~l~~~l~~aGlP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++||++||+||+|||+.+|.++ .+|++++.++|+|+|+||+|+|+. +.++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 164 ~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~a 243 (485)
T 4dng_A 164 IAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIA 243 (485)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999999999965 5889999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.|+
T Consensus 244 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~~~~~ 322 (485)
T 4dng_A 244 GRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRI-IVHQDVYDEFVEKFTARVKQLPYGDQTDP 322 (485)
T ss_dssp HHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEE-EEEHHHHHHHHHHHHHHHHHCCBSCTTST
T ss_pred hhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEE-EEeHHHHHHHHHHHHHHHHhccCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce------------------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK------------------------------------------ 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~------------------------------------------ 379 (445)
++++||++++.+++++.++|++++++|+++++||....
T Consensus 323 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~a 402 (485)
T 4dng_A 323 KTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMA 402 (485)
T ss_dssp TCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999985200
Q ss_pred ------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 ------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 ------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++.....+.+||||+|+||+| +++|++|+++||+.|+|++++
T Consensus 403 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 403 NDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG--RFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC------------------------CHHHHHHHEEEEEEEEEC
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCC--ccchHHHHHHhhceEEEEEec
Confidence 9999876444578999999999999 569999999999999999875
No 28
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.4e-85 Score=684.83 Aligned_cols=393 Identities=29% Similarity=0.433 Sum_probs=367.0
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|++
T Consensus 11 ~~~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 11 LRTDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CCCSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 335789999999764 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||..+++.|+..+++.++||++..+.+.++..+....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 168 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVG 168 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999887777666544222345678999999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEe---C-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH---G-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~---g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+ | +.++++.|+.||+||+|+||||+++|+.|++.+
T Consensus 169 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 248 (487)
T 2w8n_A 169 AALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHA 248 (487)
T ss_dssp HHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 8 567889999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHh-ccccCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEA-LKVSAGNV 340 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~-l~vG~p~~ 340 (445)
++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.+++++ +++|||.+
T Consensus 249 a~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~~G~p~~ 327 (487)
T 2w8n_A 249 ANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQF-LVQRGIHDAFVKAFAEAMKKNLRVGNGFE 327 (487)
T ss_dssp HTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEE-EEEHHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEE-EEcccHHHHHHHHHHHHHHhhcccCCccc
Confidence 99999999999999999999999999999999999999999999999999 7777 69999999999999 99999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc----c-e------------------------------------
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN----L-K------------------------------------ 379 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~----~-~------------------------------------ 379 (445)
+++++|||+++++++++.++|++++++|+++++||.. . .
T Consensus 328 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eA 407 (487)
T 2w8n_A 328 EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEA 407 (487)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHH
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHH
Confidence 9999999999999999999999999999999998752 1 1
Q ss_pred ----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++... .+.+||||+|+||+| +++|++|+++|++.|+|++
T Consensus 408 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~~~SG~G--~~~G~~~l~~f~~~k~v~~ 484 (487)
T 2w8n_A 408 IAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS-SVECPFGGVKQSGLG--REGSKYGIDEYLELKYVCY 484 (487)
T ss_dssp HHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC-CTTSCBCCSGGGEES--CBSTTTGGGGGEEEEEEEE
T ss_pred HHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC-CCCCCCCCCCCCCcC--CCchHHHHHHhcCccEEEE
Confidence 999987654 367999999999999 6799999999999999986
Q ss_pred e
Q psy10608 426 L 426 (445)
Q Consensus 426 ~ 426 (445)
+
T Consensus 485 ~ 485 (487)
T 2w8n_A 485 G 485 (487)
T ss_dssp C
T ss_pred e
Confidence 4
No 29
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=3.4e-85 Score=683.96 Aligned_cols=395 Identities=23% Similarity=0.356 Sum_probs=364.9
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
..+++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 99 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQ 99 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999994 56789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||..+++.|+..+++.++|+++..+.+.++..+....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 100 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 179 (500)
T 2j6l_A 100 VLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNA 179 (500)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHH
Confidence 99999999999999999889999999999999887766665444222344467889999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHH----HcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLT----QAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~----~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+||++||+||+|||+.+|+++..|++++. ++|+|+|+||+|+|+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 180 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~a 259 (500)
T 2j6l_A 180 IAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMV 259 (500)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999988876 46999999999999778899999999999999999999999999999
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|||.++
T Consensus 260 a~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 338 (500)
T 2j6l_A 260 QERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL-FIHESIHDEVVNRLKKAYAQIRVGNPWDP 338 (500)
T ss_dssp HHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEETTTHHHHHHHHHHHHHTCCBSCTTST
T ss_pred ccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEE-EEcHHHHHHHHHHHHHHhhhcccCCcccC
Confidence 99999999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---------e---------------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---------K--------------------------------- 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---------~--------------------------------- 379 (445)
++++|||+++++++++.++|++++++|+++++||... .
T Consensus 339 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 418 (500)
T 2j6l_A 339 NVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVF 418 (500)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHH
T ss_pred CCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHH
Confidence 9999999999999999999999999999999998631 0
Q ss_pred -----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 -----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 -----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++.....+.+||||+|+||+| +++|.+|+++|++.|+|+
T Consensus 419 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~f~~~k~v~ 496 (500)
T 2j6l_A 419 AWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGG--RESGSDAWKQYMRRSTCT 496 (500)
T ss_dssp HHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSC--CEESTTGGGGGEEEEEEE
T ss_pred HHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCC--CcchHHHHHHhhceEEEE
Confidence 9999865433467899999999999 679999999999999998
Q ss_pred eec
Q psy10608 425 QLW 427 (445)
Q Consensus 425 ~~~ 427 (445)
+++
T Consensus 497 ~~~ 499 (500)
T 2j6l_A 497 INY 499 (500)
T ss_dssp EEC
T ss_pred EeC
Confidence 753
No 30
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3.7e-85 Score=680.57 Aligned_cols=387 Identities=28% Similarity=0.448 Sum_probs=354.8
Q ss_pred eeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q psy10608 32 LYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAE 111 (445)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 111 (445)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999975 45 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhh
Q psy10608 112 NITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIA 191 (445)
Q Consensus 112 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALa 191 (445)
++++|+|||..+++.|+..+++.++||++..+.+.++..+. .+...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877766655442 2557789999999999999999999999999999999
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHHHc----CCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcC
Q psy10608 192 CGNTHVIKPSERDPGACMMLVDMLTQA----GCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKN 266 (445)
Q Consensus 192 aGN~VVlKps~~~p~~~~~l~~~l~~a----GlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~ 266 (445)
+||+||+|||+.+|.++..|++++.++ |+|+|+||+|+|+ .++++.|+.||+||+|+||||+++|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 9999999999995 566899999999999999999999999999887
Q ss_pred CCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCC
Q psy10608 267 GKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTD 344 (445)
Q Consensus 267 ~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~ 344 (445)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.+++++
T Consensus 235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 313 (486)
T 3pqa_A 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMI-LVDESIADKFIEMFVNKAKVLNVGNPLDEKTD 313 (486)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCS
T ss_pred CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEE-EEeHHHHHHHHHHHHHHHHhcccCCCCcCCCC
Confidence 89999999999999999999999999999999999999999999999 7777 69999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---------e------------------------------------
Q psy10608 345 LGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---------K------------------------------------ 379 (445)
Q Consensus 345 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---------~------------------------------------ 379 (445)
+|||+++++++++.++|++++++||++++||... .
T Consensus 314 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~deAi~~aN~~~~ 393 (486)
T 3pqa_A 314 VGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTILEVDRDNILCKTETFAPVIPIIRTNEEEMIDIANSTEY 393 (486)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECHHHHHHHHTCSSC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCCCcEeccEEEeCCCCChhhcccccccEEEEEEEcHHHHHHHHhcCCC
Confidence 9999999999999999999999999999998520 0
Q ss_pred -------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeecc
Q psy10608 380 -------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 428 (445)
Q Consensus 380 -------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~ 428 (445)
|+||++..+..+.+||||+|+||+| +++|++||++||+.|+|+++..
T Consensus 394 gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G--r~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 394 GLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLG--REGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp CSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEES--CBSHHHHHHHTEEEEEEEEEC-
T ss_pred CcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCC--CCCcHHHHHHhhceEEEEEcCC
Confidence 9999875443358999999999999 6799999999999999998753
No 31
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=7.9e-85 Score=677.93 Aligned_cols=390 Identities=27% Similarity=0.415 Sum_probs=361.8
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 81 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 81 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 357899999997654 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCC----Cce-eEEEecCCeEEEECCCCcchhhhH
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKD----MDI-HSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
|++++++|+|||..+++.|+..+++.++||++..+...++..+...++ ... ++.++|+|||++|+|||||+.+.+
T Consensus 82 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (475)
T 1euh_A 82 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 161 (475)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHH
Confidence 999999999999999999999999999999987766555543322223 355 899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHH
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYER 262 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 262 (445)
+++++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+|+ .++++.|+.||++|+|+||||+++|+.|++.
T Consensus 162 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 241 (475)
T 1euh_A 162 SKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241 (475)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999995 5688999999999999999999999999998
Q ss_pred hhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCC
Q psy10608 263 GAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNV 340 (445)
Q Consensus 263 aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~ 340 (445)
++ ++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.+
T Consensus 242 aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 318 (475)
T 1euh_A 242 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRV-LVMESVADELVEKIREKVLALTIGNPED 318 (475)
T ss_dssp TT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEE-EEEHHHHHHHHHHHHHHHHTSCBSCGGG
T ss_pred cC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEE-EEehhHHHHHHHHHHHHHHhccCCCccc
Confidence 87 89999999999999999999999999999999999999999999999 7777 6999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--ce---------------------------------------
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN--LK--------------------------------------- 379 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~--~~--------------------------------------- 379 (445)
++++|||+++++++++.++|++++++|+++++||.. ..
T Consensus 319 -~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~ 397 (475)
T 1euh_A 319 -DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEI 397 (475)
T ss_dssp -TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHH
T ss_pred -cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHH
Confidence 999999999999999999999999999999999851 10
Q ss_pred -------------------------------EEEeC-CCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 -------------------------------VGINV-PIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 -------------------------------V~iN~-~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||+ +... .+.+||||+|+||+| +++|++|+++|++.|+|++.+
T Consensus 398 an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 398 SNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKKSGAG--IQGVKYSIEAMTTVKSVVFDI 474 (475)
T ss_dssp HHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEETTEES--CBSHHHHHHHTEEEEEEEEEC
T ss_pred HhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC-CCCCCcCCCCCCCcC--CCccHHHHHHhCCeeEEEEec
Confidence 99998 6544 478999999999999 679999999999999998764
No 32
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.6e-84 Score=678.60 Aligned_cols=391 Identities=25% Similarity=0.361 Sum_probs=364.0
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhh-hhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYE-TWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
.+++||||+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|++
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD 95 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 44689999999764 7899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccccc--CC--CCceeEEEecCCeEEEECCCCcchhhhH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGV--AK--DMDIHSYRVPLGVTAGITPFNFPAMIPL 183 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 183 (445)
+|++++++|+|||..+++.|+..+++.++||++..+...++..+.. .. +...++.++|+|||++|+|||||+.+.+
T Consensus 96 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (501)
T 1uxt_A 96 VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAV 175 (501)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHH
Confidence 9999999999999999999999999999999998877766654421 12 2357899999999999999999999999
Q ss_pred hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 184 WMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 184 ~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+.++++.|+.||+||+|+||||+++|+.|++.+
T Consensus 176 ~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~a 255 (501)
T 1uxt_A 176 NKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG 255 (501)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999668889999999999999999999999999988
Q ss_pred hcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCC
Q psy10608 264 AKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVP 341 (445)
Q Consensus 264 a~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~ 341 (445)
+ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|.++++++++|||.|+
T Consensus 256 a--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 332 (501)
T 1uxt_A 256 G--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLV-LAERPVYGKLVEEVAKRLSSLRVGDPRDP 332 (501)
T ss_dssp C--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEHHHHHHHHHHHHHHHHTCCBSCTTST
T ss_pred C--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEE-EeccchHHHHHHHHHHHHHhccCCCcccc
Confidence 7 89999999999999999999999999999999999999999999999 7777 69999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc--c------------c---e-------------------------
Q psy10608 342 GTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR--N------------L---K------------------------- 379 (445)
Q Consensus 342 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~--~------------~---~------------------------- 379 (445)
++++|||+++++++++.++|++++++||++++||. . . .
T Consensus 333 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deA 412 (501)
T 1uxt_A 333 TVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQA 412 (501)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCBCSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999999863 1 1 1
Q ss_pred ----------------------------------EEEeCC-CCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEE
Q psy10608 380 ----------------------------------VGINVP-IPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 380 ----------------------------------V~iN~~-~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
|+||++ +.. .+.+||||+|+||+| +++|++||++|++.|+|+
T Consensus 413 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~~PfGG~k~SG~G--~~~G~~~l~~f~~~k~v~ 489 (501)
T 1uxt_A 413 IELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHG-IGYYPFGGRKKSGVF--REGIGYAVEAVTAYKTIV 489 (501)
T ss_dssp HHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCT-TSSSCBCCEETTEES--CBSTTTTHHHHEEEEEEE
T ss_pred HHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCC-CCCCCCCCcCCCCCC--ccChHHHHHHhCceeEEE
Confidence 999987 433 478999999999999 679999999999999999
Q ss_pred eec
Q psy10608 425 QLW 427 (445)
Q Consensus 425 ~~~ 427 (445)
+.+
T Consensus 490 ~~~ 492 (501)
T 1uxt_A 490 FNY 492 (501)
T ss_dssp EEC
T ss_pred Eec
Confidence 875
No 33
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=3.4e-84 Score=678.89 Aligned_cols=392 Identities=30% Similarity=0.440 Sum_probs=361.4
Q ss_pred ccceeecCEeeeCCCCCeEEeecCC-CCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPA-TNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~-~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
..++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999964 5689999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCcccc-ccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLA-GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
+|++++++|+|||..+++.|+..+++.++||++..+.+.+...+ ...++...++.++|+|||++|+|||||+.+.++++
T Consensus 115 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 194 (516)
T 1uzb_A 115 ELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMI 194 (516)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999877666554322 12234456889999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh-
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA- 264 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa- 264 (445)
++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+++++|+.||+|++|+||||+.+|+.|++.++
T Consensus 195 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 274 (516)
T 1uzb_A 195 VGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR 274 (516)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 5678999999999999999999999999999998
Q ss_pred -----cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccC
Q psy10608 265 -----KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSA 337 (445)
Q Consensus 265 -----~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~ 337 (445)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++||
T Consensus 275 ~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~ 353 (516)
T 1uzb_A 275 LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRL-ILTQGAYEPVLERVLKRAERLSVGP 353 (516)
T ss_dssp CCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEHHHHHHHHHHHHHHHTTCCBSC
T ss_pred ccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEE-EEchHHHHHHHHHHHHHHHhccCCC
Confidence 7899999999999999999999999999999999999999999999999 7777 6999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---e-----------------------------------
Q psy10608 338 GNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNL---K----------------------------------- 379 (445)
Q Consensus 338 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~---~----------------------------------- 379 (445)
| ++++++|||+++.+++++.++|++++++| ++++||... .
T Consensus 354 p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 431 (516)
T 1uzb_A 354 A-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDF 431 (516)
T ss_dssp G-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred C-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCH
Confidence 9 99999999999999999999999999999 899998631 0
Q ss_pred -------------------------------------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeE
Q psy10608 380 -------------------------------------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETK 421 (445)
Q Consensus 380 -------------------------------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k 421 (445)
|+||++... ..+.+||||+|.||+|+ +++|++++++|++.|
T Consensus 432 ~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~l~~f~~~k 510 (516)
T 1uzb_A 432 AEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA-KTGALDYLRLFLEMK 510 (516)
T ss_dssp HHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCC-CBTSHHHHHTTEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCC-ccchHHHHHHcCCee
Confidence 999985432 34679999999999995 368999999999999
Q ss_pred EEEee
Q psy10608 422 TVTQL 426 (445)
Q Consensus 422 ~v~~~ 426 (445)
+|+++
T Consensus 511 ~v~~~ 515 (516)
T 1uzb_A 511 AVAER 515 (516)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99864
No 34
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.5e-84 Score=674.02 Aligned_cols=377 Identities=23% Similarity=0.322 Sum_probs=353.8
Q ss_pred eEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh
Q psy10608 46 WIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE 125 (445)
Q Consensus 46 ~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 125 (445)
+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCCh
Q psy10608 126 GDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDP 205 (445)
Q Consensus 126 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p 205 (445)
.|+..+++.++||++..+...+...+ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKL-NSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEE-CCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeec-cCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 99999999999999887666555443 22456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecC
Q psy10608 206 GACMMLVDMLTQAGCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS 284 (445)
Q Consensus 206 ~~~~~l~~~l~~aGlP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~ 284 (445)
.++..|++++.++|+|+|+||+|+|+. +.++ |+.||+||+|+||||+++|+.|++.+++++||+++|||||||+||++
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~ 242 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC
Confidence 999999999999999999999999965 4566 99999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy10608 285 DANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQ 362 (445)
Q Consensus 285 daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~ 362 (445)
|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|||.++++++|||+++++++++.++|+
T Consensus 243 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~ 321 (484)
T 3ros_A 243 DADPQVLRNVLNDARTYNDGQVCTSSKRI-IVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVK 321 (484)
T ss_dssp TCCHHHHHHHHTTTTTGGGGCCTTSCCEE-EEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCccCCceE-EEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999 7777 69999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeCCccce---------------------------------------------------------------
Q psy10608 363 SGVDEGATLLLDGRNLK--------------------------------------------------------------- 379 (445)
Q Consensus 363 ~a~~~Ga~~~~GG~~~~--------------------------------------------------------------- 379 (445)
+++++||++++||....
T Consensus 322 ~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~ 401 (484)
T 3ros_A 322 EAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDR 401 (484)
T ss_dssp HHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHH
T ss_pred HHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHH
Confidence 99999999999986310
Q ss_pred ------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeecc
Q psy10608 380 ------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 428 (445)
Q Consensus 380 ------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~ 428 (445)
|+||++... .+.+||||+|+||+| +++|++||++||+.|+|+++..
T Consensus 402 a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 402 AKKVSAQIETGMTVINGRWIT-SGELPFGGIKKSGYG--RELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HHHHHHHSCSSCCEETSCCCC-CTTSCBCCSGGGEES--CBSHHHHHTTTCEEEEEEECGG
T ss_pred HHHHHHhCccceEEECCCCCC-CCCCCcCCcCcccCC--cCchHHHHHHhheeEEEEECCC
Confidence 999997654 478999999999999 6799999999999999998653
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=3.1e-84 Score=674.37 Aligned_cols=388 Identities=30% Similarity=0.470 Sum_probs=342.2
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 85 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKD 85 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 35689999999998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhh-hHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHH
Q psy10608 108 QLAENITEEQGKTLADA-EGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMF 186 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i 186 (445)
+|++++++|+|||..++ ..|+..+++.++|+++..+...+... ....++.++|+|||++|+|||||+.+.++++
T Consensus 86 ~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (478)
T 3ty7_A 86 DIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL 160 (478)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999 67999999999999987665544321 2357889999999999999999999999999
Q ss_pred HHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc
Q psy10608 187 PVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK 265 (445)
Q Consensus 187 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~ 265 (445)
++||++||+||+|||+.+|.++..|++++.++|+|+|+||+|+| +.++++.|+.||+||+|+||||+++|+.|++.+++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~ 240 (478)
T 3ty7_A 161 AAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK 240 (478)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTT
T ss_pred HHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999 56889999999999999999999999999999999
Q ss_pred CCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCC
Q psy10608 266 NGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGT 343 (445)
Q Consensus 266 ~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~ 343 (445)
+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++|+|.++++
T Consensus 241 ~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 319 (478)
T 3ty7_A 241 DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRV-LVPNKIKDAFLAELKEQFSQVRVGNPREDGT 319 (478)
T ss_dssp TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEE-EEETTTHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeE-EEcHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999 7777 6999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--------c----e--------------------------------
Q psy10608 344 DLGPVISPQAKERILSLIQSGVDEGATLLLDGRN--------L----K-------------------------------- 379 (445)
Q Consensus 344 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~--------~----~-------------------------------- 379 (445)
++|||+++++++++.++|++++++|+++++||.. . .
T Consensus 320 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eA 399 (478)
T 3ty7_A 320 QVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEA 399 (478)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHH
Confidence 9999999999999999999999999999999821 0 0
Q ss_pred ----------------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ----------------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ----------------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||+ .. ..+.+||||+|+||+| +++|++||++||+.|+|+.
T Consensus 400 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 400 IQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AG-RKPDLPFGGYKQSGLG--REWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC-------------------------CCGGGEEEEEEET
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CC-CCCCCCcCCcCcCcCC--ccchHHHHHHhcCeEEEEE
Confidence 99998 33 3467899999999999 6799999999999999974
No 36
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.7e-82 Score=658.87 Aligned_cols=378 Identities=25% Similarity=0.370 Sum_probs=355.0
Q ss_pred CCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHh
Q psy10608 44 TDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLAD 123 (445)
Q Consensus 44 ~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 123 (445)
..+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+
T Consensus 6 ~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T 3etf_A 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQ 85 (462)
T ss_dssp CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred cCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCC
Q psy10608 124 AEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSER 203 (445)
Q Consensus 124 a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~ 203 (445)
++.|+..+++.++|+++..+...+.. +....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~ 164 (462)
T 3etf_A 86 ARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPN 164 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCC
Confidence 99999999999999998776655543 21234556789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEec
Q psy10608 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIM 283 (445)
Q Consensus 204 ~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~ 283 (445)
+|.++.+|++++.++|+|+|+||+|+|+.+.+..|+.||+|++|+||||+++|+.|++.++++++|+++|||||||+||+
T Consensus 165 tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~ 244 (462)
T 3etf_A 165 VTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL 244 (462)
T ss_dssp CHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEEC
T ss_pred CcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEEC
Confidence 99999999999999999999999999988888999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy10608 284 SDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLI 361 (445)
Q Consensus 284 ~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i 361 (445)
+|||++.|++.+++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++|||++.++++++.++|
T Consensus 245 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i 323 (462)
T 3etf_A 245 NDADLELAVKAAVAGRYQNTGQVCAAAKRF-IVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQV 323 (462)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCCTTCEEEE-EEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccCCcEE-EEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999 7777 6999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeCCccce--------------------------------------------------------------
Q psy10608 362 QSGVDEGATLLLDGRNLK-------------------------------------------------------------- 379 (445)
Q Consensus 362 ~~a~~~Ga~~~~GG~~~~-------------------------------------------------------------- 379 (445)
++++++|+++++||....
T Consensus 324 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~ 403 (462)
T 3etf_A 324 QASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDT 403 (462)
T ss_dssp HHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHH
T ss_pred HHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 999999999999986210
Q ss_pred -------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEee
Q psy10608 380 -------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQL 426 (445)
Q Consensus 380 -------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~ 426 (445)
|+||++... .+.+||||+|+||+| +++|++|+++||+.|+|+++
T Consensus 404 ~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~k~SG~G--~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 404 LAAEMAARLECGGVFINGYSAS-DARVAFGGVKKSGFG--RELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp HHHHHHHHCCSSEEEESSCCCC-CTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHhCCcceEEECCCCCC-CCCCCcCCcCCCCCC--ccchHHHHHHHhceeEEEEe
Confidence 999987644 478999999999999 67999999999999999864
No 37
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.7e-81 Score=652.38 Aligned_cols=386 Identities=25% Similarity=0.345 Sum_probs=357.0
Q ss_pred ceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 31 KLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|+
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999864 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHh
Q psy10608 111 ENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAI 190 (445)
Q Consensus 111 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 190 (445)
+++++|+|||..+++.|+..+++.++|++...+...+...+ ...+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 86 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 164 (490)
T 3ju8_A 86 RVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSG-PLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPAL 164 (490)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEE-EETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999998876665554433 12234567779999999999999999999999999999
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcE
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~ 270 (445)
++||+||+|||+.+|.++.+|++++.++|+|+|+||+|+|+.+.++.|+.||+||+|+||||+++|+.|++.++++++|+
T Consensus 165 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v 244 (490)
T 3ju8_A 165 LAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKI 244 (490)
T ss_dssp HHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSE
T ss_pred HcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCc
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999998
Q ss_pred -EEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc---cchHHHHHHHHHHhccccC-CCCCCCCC
Q psy10608 271 -QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE---AVEWLPELKKRAEALKVSA-GNVPGTDL 345 (445)
Q Consensus 271 -~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~---~~~f~~~l~~~~~~l~vG~-p~~~~~~~ 345 (445)
++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+ |.++++++
T Consensus 245 ~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~ 323 (490)
T 3ju8_A 245 LALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRL-LVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFM 323 (490)
T ss_dssp EEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEE-EEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSB
T ss_pred EEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEE-EEECCccHHHHHHHHHHHHHhccCCCCCCCCcCcc
Confidence 7999999999999999999999999999999999999999999 6655 5999999999999999999 99999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce----------------------------------------------
Q psy10608 346 GPVISPQAKERILSLIQSGVDEGATLLLDGRNLK---------------------------------------------- 379 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~---------------------------------------------- 379 (445)
|||+++++++++.++|++++++||++++||....
T Consensus 324 Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~ 403 (490)
T 3ju8_A 324 GAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANA 403 (490)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHC
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHHHHHHhc
Confidence 9999999999999999999999999999984210
Q ss_pred ----------------------------EEEeCCCCCCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 ----------------------------VGINVPIPVPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 ----------------------------V~iN~~~~~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|+||++.....+.+||||+|.||++ ++++|++.|+|++..
T Consensus 404 ~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~--------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 404 TQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH--------RPSAYYAADYCAYPV 471 (490)
T ss_dssp SSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS--------CCEETTHHHHHEEEE
T ss_pred CCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh--------HHHhhheeEEEEEec
Confidence 9999876544578999999999876 378999999998654
No 38
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=2.7e-81 Score=660.23 Aligned_cols=395 Identities=22% Similarity=0.268 Sum_probs=359.2
Q ss_pred cccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHh-
Q psy10608 28 ATTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKAN- 105 (445)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~- 105 (445)
..+++||||+|+.+. ..+.++||+| |+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~ 139 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPR 139 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence 456899999999764 4678899998 799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHhhhHH-HHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHh
Q psy10608 106 MKQLAENITEEQGKTLADAEGD-VLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLW 184 (445)
Q Consensus 106 ~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 184 (445)
+++|++++++|+|||+.+++.| +..+++.++|++...+.+.+........+...+.++.|+|||++|+|||||+....+
T Consensus 140 ~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~ 219 (563)
T 4e3x_A 140 RAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL 219 (563)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHH
Confidence 9999999999999999999887 999999999999887766553322111223355667788999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 185 MFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 185 ~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
+++||| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 220 ~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~a 298 (563)
T 4e3x_A 220 AGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQV 298 (563)
T ss_dssp HHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999 5999999999999999999999999999999999999995 56789999999999999999999999999999
Q ss_pred hcCCCc------EEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccc
Q psy10608 264 AKNGKR------VQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKV 335 (445)
Q Consensus 264 a~~~~~------~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~v 335 (445)
+++++| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++
T Consensus 299 a~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv-~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 299 AQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRL-YVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp HHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEE-EEecchHHHHHHHHHHHHHhccC
Confidence 998884 99999999999999999999999999999999999999999999 7777 69999999999999999
Q ss_pred cCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEeCCccce----------------------------------
Q psy10608 336 SAG-NVPGTDLGPVISPQAKERILSLIQSGVD-EGATLLLDGRNLK---------------------------------- 379 (445)
Q Consensus 336 G~p-~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~~~~GG~~~~---------------------------------- 379 (445)
||| .|+++++||+|++++++++.++|+++++ +||++++||....
T Consensus 378 Gdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 457 (563)
T 4e3x_A 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYV 457 (563)
T ss_dssp SCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEE
T ss_pred CCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEE
Confidence 999 9999999999999999999999999996 8999999985310
Q ss_pred ----------------------------------------------EEEeCCCC-CCCCCCccCCCCCCccCCCCcchHH
Q psy10608 380 ----------------------------------------------VGINVPIP-VPLSMFSFTGSRGSFLGENHFYGKQ 412 (445)
Q Consensus 380 ----------------------------------------------V~iN~~~~-~~~~~~pfGG~k~SG~G~~~~~g~~ 412 (445)
||||+... ...+.+||||+|+||+|. +++|++
T Consensus 458 ~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~-~~~G~~ 536 (563)
T 4e3x_A 458 YPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTND-KPGGPH 536 (563)
T ss_dssp ECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCC-CTTSTT
T ss_pred ECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCC-ccCCHH
Confidence 99998643 234679999999999985 579999
Q ss_pred HHHHhheeEEEEeec
Q psy10608 413 GFYFYTETKTVTQLW 427 (445)
Q Consensus 413 ~l~~~~~~k~v~~~~ 427 (445)
+|++|++.|+|....
T Consensus 537 ~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 537 YILRWTSPQVIKETH 551 (563)
T ss_dssp GGGGGBCCEEEEEEC
T ss_pred HHHHhCceEEEEEeC
Confidence 999999999998765
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=3.9e-80 Score=642.50 Aligned_cols=382 Identities=19% Similarity=0.266 Sum_probs=350.0
Q ss_pred CCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh
Q psy10608 42 KATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTL 121 (445)
Q Consensus 42 ~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 121 (445)
.+.++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|+++++.|++|+++|++++++|+||+.
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 82 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS 82 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HhhhHHHHHHHHHHHHHccCcccccC-ccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeC
Q psy10608 122 ADAEGDVLRGLQVVEQCCSIPTIMQG-ETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKP 200 (445)
Q Consensus 122 ~~a~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKp 200 (445)
++..|+..++..+++|+........ .......+.......++|+|||++|+|||||+.+.++++++||++||+||+||
T Consensus 83 -~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKp 161 (474)
T 4h7n_A 83 -ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKP 161 (474)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEE
T ss_pred -HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecc
Confidence 4567999999999998876554332 22232334455677889999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCee
Q psy10608 201 SERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHG 280 (445)
Q Consensus 201 s~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~ 280 (445)
|+.+|.++..+++++.++|+|+|++|+++|+.+.+..|+.| +++|+||||+.+|+.|++.+++++||++||||||||+
T Consensus 162 s~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~ 239 (474)
T 4h7n_A 162 SEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPA 239 (474)
T ss_dssp CTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEE
T ss_pred cccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCcc
Confidence 99999999999999999999999999999999999999976 8999999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHH
Q psy10608 281 VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERIL 358 (445)
Q Consensus 281 iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~ 358 (445)
||++|||++.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 240 iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~ 318 (474)
T 4h7n_A 240 IVLESANLELATSAILWGAVVNTGQSCLSIERI-YVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIIN 318 (474)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHH
T ss_pred ccCchhhHHHHHHHHHhhhccCCCCceeecccc-cchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHH
Confidence 999999999999999999999999999999999 7777 6999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCccce-----------------------------------------------------------
Q psy10608 359 SLIQSGVDEGATLLLDGRNLK----------------------------------------------------------- 379 (445)
Q Consensus 359 ~~i~~a~~~Ga~~~~GG~~~~----------------------------------------------------------- 379 (445)
+++++++++|+++++||....
T Consensus 319 ~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t 398 (474)
T 4h7n_A 319 DHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFA 398 (474)
T ss_dssp HHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEEC
T ss_pred HHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEe
Confidence 999999999999999986321
Q ss_pred -----------------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeecc
Q psy10608 380 -----------------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWR 428 (445)
Q Consensus 380 -----------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~ 428 (445)
|+||+.... ..+..||||+|.||+|. +++|++|+++|++.|+|+++..
T Consensus 399 ~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~-~~~G~~g~~~f~~~k~v~~~~~ 464 (474)
T 4h7n_A 399 GSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGG-SRVGAAGLKRFLRKQAFLIKTN 464 (474)
T ss_dssp SSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESC-CSSTTHHHHTTEEEEEEEEECS
T ss_pred CCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCC-CcchHHHHHHhCeEEEEEECCC
Confidence 999986432 23578999999999984 4689999999999999998754
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=1e-79 Score=681.57 Aligned_cols=395 Identities=31% Similarity=0.403 Sum_probs=365.2
Q ss_pred ccceeecCEeeeCCCCCeEEeecCCC-CceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 29 TTKLYIDGKFVESKATDWIDLHNPAT-NEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~~~P~~-g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
..++||||+|+.+ +++++++||+| ++++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 531 ~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~ 608 (1026)
T 4f9i_A 531 TYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLF 608 (1026)
T ss_dssp EECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999964 57899999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHH
Q psy10608 108 QLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFP 187 (445)
Q Consensus 108 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 187 (445)
+|++++++|+|||..+++.|+..+++.++||+...+.+.+.......++...++.++|+|||++|+|||||+.+.+++++
T Consensus 609 eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a 688 (1026)
T 4f9i_A 609 ELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMAS 688 (1026)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999887766554333223456678899999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCC-hhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh--
Q psy10608 188 VAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGA-HDAVNFICDHPDIRAISFVGSDQAGKYIYERGA-- 264 (445)
Q Consensus 188 ~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa-- 264 (445)
+||++||+||+|||+.+|+++..+++++.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+++|+.|++.++
T Consensus 689 ~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~ 768 (1026)
T 4f9i_A 689 AAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768 (1026)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSC
T ss_pred HHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999994 578899999999999999999999999999988
Q ss_pred ----cCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCC
Q psy10608 265 ----KNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAG 338 (445)
Q Consensus 265 ----~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p 338 (445)
++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+ +||+ +|+|+++|+++++++++|+|
T Consensus 769 ~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl-~V~~~i~d~f~~~L~~~~~~l~vG~p 847 (1026)
T 4f9i_A 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRV-IVLDAVYDKFIERLVSMAKATKVGPS 847 (1026)
T ss_dssp CTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEE-EEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred cccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceE-EecHHHHHHHHHHHHHHHHhcccCCc
Confidence 5789999999999999999999999999999999999999999999999 7777 69999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCccce---------------------------------------
Q psy10608 339 NVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRNLK--------------------------------------- 379 (445)
Q Consensus 339 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~~~--------------------------------------- 379 (445)
.++++++||+|++.+++++.++|++++++| ++++||....
T Consensus 848 ~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~d 926 (1026)
T 4f9i_A 848 EDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFD 926 (1026)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHH
Confidence 999999999999999999999999999999 9999885210
Q ss_pred ------------------------------------EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEE
Q psy10608 380 ------------------------------------VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKT 422 (445)
Q Consensus 380 ------------------------------------V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~ 422 (445)
||||+.... ..+.+||||+|.||+|+ +++|+++|++|++.|+
T Consensus 927 eAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~~l~~f~~~k~ 1005 (1026)
T 4f9i_A 927 QAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGT-KAGGPDYLLHFMDPRV 1005 (1026)
T ss_dssp HHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSC-CBTSTTTGGGGEEEEE
T ss_pred HHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCC-CcCCHHHHHHhceEEE
Confidence 999986543 34678999999999996 4699999999999999
Q ss_pred EEeecc
Q psy10608 423 VTQLWR 428 (445)
Q Consensus 423 v~~~~~ 428 (445)
|+....
T Consensus 1006 v~~~~~ 1011 (1026)
T 4f9i_A 1006 VTENTM 1011 (1026)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 998753
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.7e-78 Score=638.46 Aligned_cols=389 Identities=20% Similarity=0.266 Sum_probs=346.3
Q ss_pred cceeecCEeeeCCCCCeEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 30 TKLYIDGKFVESKATDWIDLHNPATNEVVTRVPKATPAEMESAVASAKKA-YETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+.++..+|.++|+++++.|++|+++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 57899999997654 479999999999999999988 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccccC-------ccccccCCC-CceeEEEecC-CeEEEECCCCcch
Q psy10608 109 LAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIMQG-------ETLAGVAKD-MDIHSYRVPL-GVTAGITPFNFPA 179 (445)
Q Consensus 109 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~-------~~~~~~~~~-~~~~~~~~P~-GVv~~I~p~N~P~ 179 (445)
|++++++|+|||..+++.|+..+++.++||+...+.+.+ +..+...++ ...+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 999999999999999989999999999999877654432 222211112 2357889997 9999999999999
Q ss_pred hhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcC-CCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHH
Q psy10608 180 MIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAG-CPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGK 257 (445)
Q Consensus 180 ~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aG-lP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~ 257 (445)
.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|+||+|+|+. +.++.| +++|+|+||||+.+|+
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~ 242 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAA 242 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 8999999999953 333332 5799999999999999
Q ss_pred HHHHHhh--cCCCcEEEeCCCCCeeEecCCC-----CHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHH
Q psy10608 258 YIYERGA--KNGKRVQSNMGAKNHGVIMSDA-----NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKK 328 (445)
Q Consensus 258 ~i~~~aa--~~~~~~~lElGGk~~~iV~~da-----Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~ 328 (445)
.|++.++ +++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|++
T Consensus 243 ~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~ 321 (534)
T 2y53_A 243 TLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRA-FVPEAALEPVLEALKA 321 (534)
T ss_dssp HHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEE-EEEGGGHHHHHHHHHH
T ss_pred HHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEE-EEeccHHHHHHHHHHH
Confidence 9998875 8899999999999999999999 999999999999999999999999999 7777 6999999999
Q ss_pred HHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc-----------c-------------------
Q psy10608 329 RAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN-----------L------------------- 378 (445)
Q Consensus 329 ~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~-----------~------------------- 378 (445)
+++++++|||.++++++|||+++++++++.++|+++ .+|+++++||.. .
T Consensus 322 ~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~ 400 (534)
T 2y53_A 322 KLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLH 400 (534)
T ss_dssp HHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTT
T ss_pred HHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHH
Confidence 999999999999999999999999999999999999 689999988741 0
Q ss_pred -------------------------e--------------------------------------EEEeCCCC--------
Q psy10608 379 -------------------------K--------------------------------------VGINVPIP-------- 387 (445)
Q Consensus 379 -------------------------~--------------------------------------V~iN~~~~-------- 387 (445)
+ ||||+++.
T Consensus 401 ~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~ 480 (534)
T 2y53_A 401 DVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHG 480 (534)
T ss_dssp TCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSS
T ss_pred hCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccC
Confidence 1 99997532
Q ss_pred CCCCCCccCCCCCCccCCCCc-chHHHHHHhheeEEEEeec
Q psy10608 388 VPLSMFSFTGSRGSFLGENHF-YGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 388 ~~~~~~pfGG~k~SG~G~~~~-~g~~~l~~~~~~k~v~~~~ 427 (445)
...+.+||||+|+||+| ++ +|++|+++|++.|++....
T Consensus 481 ~~~~~~pfGG~k~SG~G--r~~~g~~~l~~~~~~k~v~~~p 519 (534)
T 2y53_A 481 NVMPMSLHGGPGRAGGG--EELGGLRALAFYHRRSAIQAAS 519 (534)
T ss_dssp CCCTTSEECCSGGGCSC--CEESGGGGGGGGEEEEEEEEEH
T ss_pred CCCCCCCCCCcccCCCC--CCcchHHHHHHHhhhheeecCH
Confidence 12467999999999999 56 6999999999999998643
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.5e-76 Score=612.94 Aligned_cols=367 Identities=23% Similarity=0.315 Sum_probs=320.3
Q ss_pred eEEeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh
Q psy10608 46 WIDLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE 125 (445)
Q Consensus 46 ~~~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 125 (445)
.+++.||.||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 7 ~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 86 (457)
T 3lns_A 7 HHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVD 86 (457)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH
T ss_pred cccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -HHHHHHHHHHHHHccCcccccC-ccccc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCC
Q psy10608 126 -GDVLRGLQVVEQCCSIPTIMQG-ETLAG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 201 (445)
Q Consensus 126 -~ev~~~~~~l~~~a~~~~~~~~-~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps 201 (445)
.|+..+++.++|+++..+...+ +..+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 87 ~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps 166 (457)
T 3lns_A 87 LAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPS 166 (457)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 5999999999999876544332 22211 1124567899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeE
Q psy10608 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGV 281 (445)
Q Consensus 202 ~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~i 281 (445)
+.+|.++.+|++++.++ +|+|+||+|+|+.+.++.|+. ++||+|+||||+++|+.|++.+++++||+++|||||||+|
T Consensus 167 ~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~i 244 (457)
T 3lns_A 167 ETTPETSAVIEKIIAEA-FAPEYVAVIQGGRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLI 244 (457)
T ss_dssp TTCHHHHHHHHHHHHHH-CCTTTEEECCCCHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEE
T ss_pred CCChHHHHHHHHHHHHh-CCHhhEEEecCCHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCe
Confidence 99999999999999999 999999999998888999998 6899999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHH
Q psy10608 282 IMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILS 359 (445)
Q Consensus 282 V~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~ 359 (445)
|++|||+|.|++.+++++|.|+||.|++++|| +||+ +|+|+++|++++++++ |.++ ++|||+++++++++.+
T Consensus 245 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~ 318 (457)
T 3lns_A 245 VLPDADLDQTVNQLMFGKFINSGQTXIAPDYL-YVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVS 318 (457)
T ss_dssp ECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEE-EEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCCCccCCceE-EEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999 7777 6999999999999988 6665 9999999999999999
Q ss_pred HHHHHHHcCCEEEeCCccce------------------------------------------------------------
Q psy10608 360 LIQSGVDEGATLLLDGRNLK------------------------------------------------------------ 379 (445)
Q Consensus 360 ~i~~a~~~Ga~~~~GG~~~~------------------------------------------------------------ 379 (445)
+|+++. +++++||....
T Consensus 319 ~i~~a~---~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d 395 (457)
T 3lns_A 319 LLEATQ---GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKD 395 (457)
T ss_dssp HHHHCC---SEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSC
T ss_pred HHHhcC---CeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCC
Confidence 999863 59999986310
Q ss_pred ---------------EEEeCCCC-CCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEe
Q psy10608 380 ---------------VGINVPIP-VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQ 425 (445)
Q Consensus 380 ---------------V~iN~~~~-~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~ 425 (445)
|+||++.. ...+.+||||+|+||+| +++|++|+++||+.|+|++
T Consensus 396 ~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 396 MDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMG--EYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp HHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEEC--CBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCC--CCchHHHHHHhhCeeEEEe
Confidence 99998643 23578999999999999 6799999999999999975
No 43
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.3e-75 Score=606.71 Aligned_cols=368 Identities=22% Similarity=0.286 Sum_probs=325.0
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhh-HHHHHHHHHHHHHccC
Q psy10608 63 KATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAE-GDVLRGLQVVEQCCSI 141 (445)
Q Consensus 63 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~ 141 (445)
..+.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++ .|+..++..++|++..
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 346779999999999999999999999999999999999999999999999999999999997 4999888888877654
Q ss_pred cc-cccCcccc--ccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHc
Q psy10608 142 PT-IMQGETLA--GVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQA 218 (445)
Q Consensus 142 ~~-~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a 218 (445)
.. +....... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..|++++.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a 173 (469)
T 3sza_A 94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY 173 (469)
T ss_dssp HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 32 22111111 0112345788999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHH
Q psy10608 219 GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGA 298 (445)
Q Consensus 219 GlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~ 298 (445)
+|+|+||+|+|+.+.+..|+.| ++|+|+||||+++|+.|++.+++++||+++|||||||+||++|||+|.|++.++++
T Consensus 174 -lP~gvv~vv~g~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 174 -LDKDLYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251 (469)
T ss_dssp -SCTTTSCBCCCSHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred -CCcceEEEEECCHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHH
Confidence 9999999999987777888888 79999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc
Q psy10608 299 AFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGR 376 (445)
Q Consensus 299 ~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~ 376 (445)
+|.|+||.|++++|| +||+ +|+|+++|+++++++ +|+|.++++++|||+++++++++.++| +||++++||.
T Consensus 252 ~~~n~GQ~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~ 324 (469)
T 3sza_A 252 KFMNSGQTCVAPDYI-LCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGT 324 (469)
T ss_dssp HHGGGGCCTTSCCEE-EECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCC
T ss_pred HHhcCCCCCCCCcEE-EEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCc
Confidence 999999999999999 7787 699999999999998 599999999999999999999999999 6999999996
Q ss_pred cce--------------------------------------------------------------------------EEE
Q psy10608 377 NLK--------------------------------------------------------------------------VGI 382 (445)
Q Consensus 377 ~~~--------------------------------------------------------------------------V~i 382 (445)
... |||
T Consensus 325 ~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~v 404 (469)
T 3sza_A 325 GDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAA 404 (469)
T ss_dssp EETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEE
T ss_pred cCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 310 999
Q ss_pred eCCCC-CCCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeeccccc--cccccccCCC
Q psy10608 383 NVPIP-VPLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRESD--VTHSKAAVSM 441 (445)
Q Consensus 383 N~~~~-~~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~~~--~~~~~~~~~~ 441 (445)
|++.. ...+.+||||+|+||+| +++|++|+++||+.|+|+++....+ ....+|+|.-
T Consensus 405 N~~~~~~~~~~~PfGG~k~SG~G--r~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~yppy~~ 464 (469)
T 3sza_A 405 NDVIVHITLHSLPFGGVGNSGMG--SYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPA 464 (469)
T ss_dssp SCSSGGGSCTTSCBCCCGGGEEC--CBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSSCCC
T ss_pred eCCCCCCCCCCCCcCCccccccC--ccchHHHHHHhhCeeEEEECCcccccccccccCCCCc
Confidence 98652 23478999999999999 6799999999999999998754433 4567888864
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=7e-75 Score=610.24 Aligned_cols=384 Identities=19% Similarity=0.206 Sum_probs=339.2
Q ss_pred cccccceeecCEeeeCCCCCeEEeecCCCCceEE-EeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHH
Q psy10608 26 HIATTKLYIDGKFVESKATDWIDLHNPATNEVVT-RVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKA 104 (445)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~~g~~i~-~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 104 (445)
.+...++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++
T Consensus 26 ~~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3v4c_A 26 FTPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEA 100 (528)
T ss_dssp CCCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 445678999999997643 89999999998 999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHccCcccc--cCccc----cc--cCCCCceeEEEecCCeEEEECCCC
Q psy10608 105 NMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCSIPTIM--QGETL----AG--VAKDMDIHSYRVPLGVTAGITPFN 176 (445)
Q Consensus 105 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~--~~~~~----~~--~~~~~~~~~~~~P~GVv~~I~p~N 176 (445)
++++|++++++|+|||..+++.|+..+++.++||++..+.. .+... +. ...+...++.++|+|||++|+|||
T Consensus 101 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 180 (528)
T 3v4c_A 101 RAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASN 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSS
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCc
Confidence 99999999999999999999999999999999999776542 22211 10 012345688999999999999999
Q ss_pred cchhhhH--hHHHHHhhcCCEEEEeCCCCChHHHHHHHHHH----HHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEe
Q psy10608 177 FPAMIPL--WMFPVAIACGNTHVIKPSERDPGACMMLVDML----TQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISF 249 (445)
Q Consensus 177 ~P~~~~~--~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l----~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~f 249 (445)
||+.+.+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|+||+|+| +.+++++|+.||+|++|+|
T Consensus 181 ~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~f 260 (528)
T 3v4c_A 181 FPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGF 260 (528)
T ss_dssp STTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEE
T ss_pred chHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 9999865 99999999999999999999999999998875 568999999999999 5688999999999999999
Q ss_pred eCCHHHHHHHHHHhhcCC--CcEEEeCCCCCeeEecCCC---CHHHHHHHHHHHhhcccCCcccccceEEEecc---cch
Q psy10608 250 VGSDQAGKYIYERGAKNG--KRVQSNMGAKNHGVIMSDA---NRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE---AVE 321 (445)
Q Consensus 250 tGs~~~g~~i~~~aa~~~--~~~~lElGGk~~~iV~~da---Dl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~---~~~ 321 (445)
|||+.+|+.|++.+++++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|| +||+ +|+
T Consensus 261 TGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~~i~d~ 339 (528)
T 3v4c_A 261 TGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIA-VVIEGADADR 339 (528)
T ss_dssp ESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEE-EEESSHHHHH
T ss_pred ECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEE-EEecccHHHH
Confidence 999999999999999999 9999999999999999999 889999999999999999999999999 6665 599
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcc---------------c---e----
Q psy10608 322 WLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLLDGRN---------------L---K---- 379 (445)
Q Consensus 322 f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~GG~~---------------~---~---- 379 (445)
|+++|++++++++.| +.+||++++++.+++.++++ ++||++++||.. . .
T Consensus 340 f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~~g~~~~PTvl~~~~~~~~~~~i~~ 410 (528)
T 3v4c_A 340 FTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATESSGRDASPNLFETTGAQFLADHALG 410 (528)
T ss_dssp HHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCCCTTEECCEEEEEEHHHHHHCGGGG
T ss_pred HHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCcCCceeccEEEEecCcccccChhhc
Confidence 999999999998754 57899999888888887764 479999999841 0 0
Q ss_pred ---------------------------------------------------------EEEeCCCC-C-CCCCCccCC-CC
Q psy10608 380 ---------------------------------------------------------VGINVPIP-V-PLSMFSFTG-SR 399 (445)
Q Consensus 380 ---------------------------------------------------------V~iN~~~~-~-~~~~~pfGG-~k 399 (445)
||||++.. . ..+.+|||| +|
T Consensus 411 eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~ 490 (528)
T 3v4c_A 411 EEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYP 490 (528)
T ss_dssp CCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTT
T ss_pred ccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCC
Confidence 99998543 2 347899999 99
Q ss_pred CCccCCCCcchHHHHHHhheeEEEE
Q psy10608 400 GSFLGENHFYGKQGFYFYTETKTVT 424 (445)
Q Consensus 400 ~SG~G~~~~~g~~~l~~~~~~k~v~ 424 (445)
.||+|+++.+|++|+++|++.|++.
T Consensus 491 ~Sg~gr~~~~G~~gl~~~~~~k~~q 515 (528)
T 3v4c_A 491 ASTNFGATSVGTMSIRRFLRPVAYQ 515 (528)
T ss_dssp TBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred CCCCCCCCCCcHHHHHHhchhHHhh
Confidence 9999965456999999999999863
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.4e-72 Score=590.37 Aligned_cols=375 Identities=17% Similarity=0.225 Sum_probs=331.1
Q ss_pred eCCCCCeEEeecCCCCceE-EEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q psy10608 40 ESKATDWIDLHNPATNEVV-TRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQG 118 (445)
Q Consensus 40 ~~~~~~~~~~~~P~~g~~i-~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G 118 (445)
.+.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|
T Consensus 2 ~~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 81 (510)
T 1ez0_A 2 NPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETA 81 (510)
T ss_dssp ---CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred CCCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence 3456778999999999999 799999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHhhhHHHHHHHHHHHHHccCccc--ccCcccc----ccCC-C-CceeEEEecCCeEEEECCCCcchhhh--HhHHHH
Q psy10608 119 KTLADAEGDVLRGLQVVEQCCSIPTI--MQGETLA----GVAK-D-MDIHSYRVPLGVTAGITPFNFPAMIP--LWMFPV 188 (445)
Q Consensus 119 k~~~~a~~ev~~~~~~l~~~a~~~~~--~~~~~~~----~~~~-~-~~~~~~~~P~GVv~~I~p~N~P~~~~--~~~i~~ 188 (445)
||..+++.|+..+++.++||++..+. ..+..+. ...+ + ...++.++|+|||++|+|||||+.+. ++++++
T Consensus 82 k~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ 161 (510)
T 1ez0_A 82 LPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTAS 161 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHH
Confidence 99999999999999999999877653 2222221 0101 1 23578999999999999999999985 499999
Q ss_pred HhhcCCEEEEeCCCCChHHHHHHHHHH----HHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHh
Q psy10608 189 AIACGNTHVIKPSERDPGACMMLVDML----TQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERG 263 (445)
Q Consensus 189 ALaaGN~VVlKps~~~p~~~~~l~~~l----~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 263 (445)
||++||+||+|||+.+|+++..|++++ .++|+|+|+||+|+| +.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 162 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 241 (510)
T 1ez0_A 162 ALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 241 (510)
T ss_dssp HHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHh
Confidence 999999999999999999999999998 568999999999999 677899999999999999999999999999999
Q ss_pred hcCC--CcEEEeCCCCCeeEecCCCCHH--HHHHHHHHHhhcccCCcccccceEEEecc---cchHHHHHHHHHHhcccc
Q psy10608 264 AKNG--KRVQSNMGAKNHGVIMSDANRS--NTLNQLVGAAFGAAGQRCMALSTVIFVGE---AVEWLPELKKRAEALKVS 336 (445)
Q Consensus 264 a~~~--~~~~lElGGk~~~iV~~daDl~--~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~---~~~f~~~l~~~~~~l~vG 336 (445)
++++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|| +||+ +|+|+++|.++++++++
T Consensus 242 a~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rv-lV~~~~i~d~f~~~l~~~~~~~~~- 319 (510)
T 1ez0_A 242 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVV-FALNTPETQAFIETAQSLIRQQSP- 319 (510)
T ss_dssp HHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEE-EEESSHHHHHHHHHHHHHHHHCCC-
T ss_pred hccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEE-EEeCCccHHHHHHHHHHHHHhcCC-
Confidence 9886 9999999999999999999999 999999999999999999999999 6666 49999999999999874
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEeCCc--c------c---------e-------------------
Q psy10608 337 AGNVPGTDLGPVISPQAKERILSLIQSGVD-EGATLLLDGR--N------L---------K------------------- 379 (445)
Q Consensus 337 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~-~Ga~~~~GG~--~------~---------~------------------- 379 (445)
||++++.+.+++.++|+++++ +|+++++||. . + .
T Consensus 320 ---------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~ 390 (510)
T 1ez0_A 320 ---------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCEN 390 (510)
T ss_dssp ---------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCCCTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESS
T ss_pred ---------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCCCCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCC
Confidence 688899999999999999994 7999999973 0 0 1
Q ss_pred ------------------------------------------EEEeCCCCC--CCCCCccCC-CCCCccCCCCcchHHHH
Q psy10608 380 ------------------------------------------VGINVPIPV--PLSMFSFTG-SRGSFLGENHFYGKQGF 414 (445)
Q Consensus 380 ------------------------------------------V~iN~~~~~--~~~~~pfGG-~k~SG~G~~~~~g~~~l 414 (445)
|+||++... ..+.+|||| +|+||+|+++++|++||
T Consensus 391 ~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl 470 (510)
T 1ez0_A 391 VADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAI 470 (510)
T ss_dssp HHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGG
T ss_pred HHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHH
Confidence 999986432 136799999 79999986556899999
Q ss_pred HHhheeEEEEe
Q psy10608 415 YFYTETKTVTQ 425 (445)
Q Consensus 415 ~~~~~~k~v~~ 425 (445)
++|++.|++.-
T Consensus 471 ~~~~~~k~~~~ 481 (510)
T 1ez0_A 471 HRWLRPVAYQA 481 (510)
T ss_dssp GGGEEEEEEES
T ss_pred HHhheEEEEcC
Confidence 99999998763
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=9.3e-73 Score=624.67 Aligned_cols=362 Identities=25% Similarity=0.316 Sum_probs=334.9
Q ss_pred eeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhHHHHHHHHHHHHHcc
Q psy10608 61 VPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEGDVLRGLQVVEQCCS 140 (445)
Q Consensus 61 v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~ 140 (445)
++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++..|+..+++.++||+.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcccccCcc--ccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHc
Q psy10608 141 IPTIMQGET--LAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQA 218 (445)
Q Consensus 141 ~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a 218 (445)
..+...+.. .+ ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 624 ~a~~~~g~~~~~~-~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eA 702 (1001)
T 3haz_A 624 QGRKLFGSETAMP-GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA 702 (1001)
T ss_dssp HHHHHHSSCEECC-CCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhcCcccccc-CCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHh
Confidence 877665532 22 234567789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhc---CCCcEEEeCCCCCeeEecCCCCHHHHHHHH
Q psy10608 219 GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAK---NGKRVQSNMGAKNHGVIMSDANRSNTLNQL 295 (445)
Q Consensus 219 GlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~---~~~~~~lElGGk~~~iV~~daDl~~a~~~i 295 (445)
|+|+|+||+|+|+++.++.|+.||+|++|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+
T Consensus 703 GlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~i 782 (1001)
T 3haz_A 703 GIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782 (1001)
T ss_dssp TCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred CcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHH
Confidence 99999999999965559999999999999999999999999999885 489999999999999999999999999999
Q ss_pred HHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEe
Q psy10608 296 VGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLL 373 (445)
Q Consensus 296 v~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~ 373 (445)
++++|.|+||.|++++|| +||+ +|+|+++|+++++++++|+|.++++++||||++.+++++.++|++++++| ++ +
T Consensus 783 v~s~f~naGQ~C~A~~rl-lV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~ 859 (1001)
T 3haz_A 783 VTSAFRSAGQRCSALRLL-FVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-H 859 (1001)
T ss_dssp HHHHHGGGGCSTTCEEEE-EEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-E
T ss_pred HHHHHhCCCCCCCCCcee-eccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-e
Confidence 999999999999999999 7777 69999999999999999999999999999999999999999999999988 88 7
Q ss_pred CCccce--------------------------------------------------------------------------
Q psy10608 374 DGRNLK-------------------------------------------------------------------------- 379 (445)
Q Consensus 374 GG~~~~-------------------------------------------------------------------------- 379 (445)
||....
T Consensus 860 gg~~~~~G~fv~PTvl~~~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~ 939 (1001)
T 3haz_A 860 FAGPAPEGCFVAPHIFELTEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGN 939 (1001)
T ss_dssp EECCCCSSSCCCCEEEECSSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSE
T ss_pred ccccCCCCcEEeeEEecCCCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeee
Confidence 764210
Q ss_pred EEEeCCCCC-CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 380 VGINVPIPV-PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 380 V~iN~~~~~-~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||||++... ..+.+||||+|.||+|+ +++|++||++|++.|+|++..
T Consensus 940 V~VN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 940 IYVNRNMIGAVVGVQPFGGNGLSGTGP-KAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp EEESSCSCCCCTTTSCBCCCGGGBCCC-CBTSTTSGGGGEEEEEEEEEC
T ss_pred EEEeCCCcCCCCCCCCCCCcccCcCCC-CCCCHHHHHHhceeeEEEECC
Confidence 999987543 23568999999999996 468999999999999999865
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-68 Score=553.11 Aligned_cols=372 Identities=14% Similarity=0.112 Sum_probs=282.4
Q ss_pred EeecCCCCceEEEeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------CCC
Q psy10608 48 DLHNPATNEVVTRVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQ-------GKT 120 (445)
Q Consensus 48 ~~~~P~~g~~i~~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~ 120 (445)
-++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hH----hhhHHHHHHHHHHHHHccCcccccCcccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCC
Q psy10608 121 LA----DAEGDVLRGLQVVEQCCSIPTIMQGETLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGN 194 (445)
Q Consensus 121 ~~----~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN 194 (445)
+. ++..|+..+++.++||++..+...++..+.. ..+...++.++|+|||++|+||| |.+.+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 87 5678999999999999977665555543311 13445688999999999999888 88777 89999999999
Q ss_pred EEEEeCCCCChHHHHHHHHHHHHc----CCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcE
Q psy10608 195 THVIKPSERDPGACMMLVDMLTQA----GCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRV 270 (445)
Q Consensus 195 ~VVlKps~~~p~~~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~ 270 (445)
+||+|||+.+|.++..|++++.++ | |+|+||+|+|+.++++.|+.||+||+|+||||+.+|+.|++.++ +||+
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv 244 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPV 244 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCB
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCE
Confidence 999999999999999999999999 9 99999999997678899999999999999999999999999887 8999
Q ss_pred EEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecc--cc-hHHHHHHHHHHh----ccccC------
Q psy10608 271 QSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AV-EWLPELKKRAEA----LKVSA------ 337 (445)
Q Consensus 271 ~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~-~f~~~l~~~~~~----l~vG~------ 337 (445)
++|||||||+||++|||+|.|++.+++++|.| ||.|++++|| +||+ +| .+++++++.+.+ +..|.
T Consensus 245 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rv-lV~~~i~d~p~~~~~i~~~~~~Ga~v~~G~~~~~~g 322 (463)
T 2h5g_A 245 MGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETL-LIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYL 322 (463)
T ss_dssp CSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEE-EEEGGGTTSHHHHHHHHHHHHTTCEEEECHHHHC--
T ss_pred EEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEE-EEeccccchHHHHHHHHHHHhCCCEEEeCCcccccC
Confidence 99999999999999999999999999999999 9999999999 7777 44 466776665532 11111
Q ss_pred ----CC---CCCCCCCCCCCHHHHHHHHHHHHHHHHc--C-CEEEeCCccc------------eEEEeCCCCCCCCCCcc
Q psy10608 338 ----GN---VPGTDLGPVISPQAKERILSLIQSGVDE--G-ATLLLDGRNL------------KVGINVPIPVPLSMFSF 395 (445)
Q Consensus 338 ----p~---~~~~~~Gpli~~~~~~~v~~~i~~a~~~--G-a~~~~GG~~~------------~V~iN~~~~~~~~~~pf 395 (445)
+. -.+-.+||++.-..++..++.|+.+-+. | +--++..... .|+||++... .+.+||
T Consensus 323 ~~~~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~Pf 401 (463)
T 2h5g_A 323 TFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRF-SDGYRF 401 (463)
T ss_dssp -------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG-CSTTTT
T ss_pred ccCCCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC-CCCCCC
Confidence 10 1122678864332223333333333332 2 1223332210 1999987544 467999
Q ss_pred CCCCCCccC--CCCcchHHHHHHhheeEEEEeec
Q psy10608 396 TGSRGSFLG--ENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 396 GG~k~SG~G--~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
||+|+||+| +++++|++||++|++.|+|+...
T Consensus 402 GG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 402 GLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp TSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 999999999 54458999999999999998765
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.9e-65 Score=530.83 Aligned_cols=358 Identities=18% Similarity=0.214 Sum_probs=309.7
Q ss_pred EeeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HHHHHHHHHHHH
Q psy10608 60 RVPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVVEQC 138 (445)
Q Consensus 60 ~v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 138 (445)
.++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+..+++. +...+++.+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 4566788999999999999999999999999999999999999999999999999999999988764 555555655443
Q ss_pred ccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHH----H
Q psy10608 139 CSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVD----M 214 (445)
Q Consensus 139 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~----~ 214 (445)
....+. .+. +. ...+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++ +
T Consensus 85 ~~~~~~-~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 85 IKDMKT-IGM-LK-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HTTCCC-SEE-EE-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhcccc-cce-ec-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 332211 122 11 1245667889999999999999999999999999999999999999999999999987654 5
Q ss_pred HHHcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCC-CCCeeEecCCCCHHHHH
Q psy10608 215 LTQAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMG-AKNHGVIMSDANRSNTL 292 (445)
Q Consensus 215 l~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElG-Gk~~~iV~~daDl~~a~ 292 (445)
+.++|+|+|+||+|+| +.+.++.|+.||+||+|+||||+.+ .+++++++||+ +|+| ||+|+||++|||++.|+
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa 236 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAV 236 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHH
Confidence 6889999999999999 5788999999999999999999984 55667789999 8888 99999999999999999
Q ss_pred HHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHH-------HhccccCCC-CCCCCCCCCCCHHHHHHHHHHHH
Q psy10608 293 NQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRA-------EALKVSAGN-VPGTDLGPVISPQAKERILSLIQ 362 (445)
Q Consensus 293 ~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~-------~~l~vG~p~-~~~~~~Gpli~~~~~~~v~~~i~ 362 (445)
+.+++++|+|+||.|++++|| +||+ +|+|+++|+++. +++++|+|. ++++++||+++.++++++.++++
T Consensus 237 ~~i~~~~~~n~Gq~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~ 315 (464)
T 3k9d_A 237 KHILDSKTFDNGTICASEQSV-VVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAG 315 (464)
T ss_dssp HHHHHHHTGGGGCSTTSCCEE-EEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTT
T ss_pred HHHHHHHhcCCCCCCCCCcEE-EEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhh
Confidence 999999999999999999999 7777 699999999985 567899987 77899999999999999999999
Q ss_pred HHHHcCCEEEeCCccc---e------------------------------------------------------------
Q psy10608 363 SGVDEGATLLLDGRNL---K------------------------------------------------------------ 379 (445)
Q Consensus 363 ~a~~~Ga~~~~GG~~~---~------------------------------------------------------------ 379 (445)
+++.+|+++++||... .
T Consensus 316 ~a~~~ga~vl~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G 395 (464)
T 3k9d_A 316 LTVPADARVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVS 395 (464)
T ss_dssp CCCCTTCCEEEEECCCCSTTCGGGSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEE
T ss_pred hhhcCCCEEEEcCCCCCCCCCcccccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEe
Confidence 9999999999998420 0
Q ss_pred -EEEeCCCCC--------CCCCCccCCCCCCccCCCCcchHHHHHHhheeEEEEeeccc
Q psy10608 380 -VGINVPIPV--------PLSMFSFTGSRGSFLGENHFYGKQGFYFYTETKTVTQLWRE 429 (445)
Q Consensus 380 -V~iN~~~~~--------~~~~~pfGG~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~~~ 429 (445)
|+||+++.+ ..+.+|||| +.+|.| .++|..|+++|++.|+|....++
T Consensus 396 ~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g--~~~~~~~~~~~~~~k~v~~~~~~ 451 (464)
T 3k9d_A 396 RLLVNTPGALGGIGATTNLVPALTLGC-GAVGGS--SSSDNIGPENLFNIRRIATGVLE 451 (464)
T ss_dssp EEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTC--SCCSBCCGGGSEEEEEEEECCCC
T ss_pred EEEEECCccccccccCCCCCccccccC-cCCCCC--cCCCCCCHHHheEEEEEEecCCc
Confidence 999987531 347899998 678999 55899999999999999876543
No 49
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=5.8e-63 Score=509.27 Aligned_cols=353 Identities=16% Similarity=0.173 Sum_probs=281.6
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----Hhhh--------HHHHHHHH
Q psy10608 66 PAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTL----ADAE--------GDVLRGLQ 133 (445)
Q Consensus 66 ~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~ 133 (445)
.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+. .+++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 3554 37899999
Q ss_pred HHHHHccCcccccCccccc--cCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHH
Q psy10608 134 VVEQCCSIPTIMQGETLAG--VAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211 (445)
Q Consensus 134 ~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l 211 (445)
.+++++++.+.. ++..+. ...+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..|
T Consensus 105 ~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 999999877543 443331 123456789999999999999998 8 68999999999999999999999999999999
Q ss_pred HHHH----HHcCCCCcceEEEeC-Ch-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCC
Q psy10608 212 VDML----TQAGCPPGVVNVIHG-AH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285 (445)
Q Consensus 212 ~~~l----~~aGlP~gvv~vv~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 285 (445)
++++ .++|+|+|+||+|+| +. ..++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 9997 799999999999998 44 4678888999999999999999999999876 6999999999999999999
Q ss_pred CCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccc---cCCCC--------------------
Q psy10608 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKV---SAGNV-------------------- 340 (445)
Q Consensus 286 aDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~v---G~p~~-------------------- 340 (445)
||+|.|++.+++++|.|+| .|++++|| +||+ +|+|+++|+++++++++ |||.+
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rv-lV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~~~~i~~a~~G~~~~~~~~~~ 336 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETL-LVARGIAPAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDW 336 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEE-EEEGGGHHHHHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCCEECCSGGG
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceE-EEeHHHHHHHHHHHHHHHHHcCCeecCCHHHHHHHHhcccCcccCCCchhh
Confidence 9999999999999999999 99999999 7777 69999999999999988 76521
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHH--cC-CEEEeCCccc------------eEEEeCCCCCCCCCCccCCCCCCccC-
Q psy10608 341 PGTDLGPVISPQAKERILSLIQSGVD--EG-ATLLLDGRNL------------KVGINVPIPVPLSMFSFTGSRGSFLG- 404 (445)
Q Consensus 341 ~~~~~Gpli~~~~~~~v~~~i~~a~~--~G-a~~~~GG~~~------------~V~iN~~~~~~~~~~pfGG~k~SG~G- 404 (445)
.+-.+||++.--.++..++.|+.+-+ .| +--++..... .|+||+++.+ .+..||||.|+||+|
T Consensus 337 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~pfGg~~~sG~g~ 415 (444)
T 4ghk_A 337 RTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRF-ADGFEFGLGAEIGISN 415 (444)
T ss_dssp TCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGG-CSTTTTTCSCCSEEEC
T ss_pred hccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCcc-CCCCCcCCcccccccC
Confidence 12346886543333333344444333 23 1122222210 1999987654 367899999999997
Q ss_pred -CCCcchHHHHHHhheeEEEEeec
Q psy10608 405 -ENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 405 -~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
+.|++|++|+++||+.|+|++..
T Consensus 416 ~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 416 DKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp CSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CcccCCChhHHHhhceEEEEEECC
Confidence 33568999999999999998765
No 50
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.8e-62 Score=503.27 Aligned_cols=353 Identities=15% Similarity=0.148 Sum_probs=292.3
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----Hhhh--------HHHHHHHH
Q psy10608 66 PAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTL----ADAE--------GDVLRGLQ 133 (445)
Q Consensus 66 ~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~ 133 (445)
.+++++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+. .++. .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999986 4553 68999999
Q ss_pred HHHHHccCcccccCcccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHH
Q psy10608 134 VVEQCCSIPTIMQGETLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMML 211 (445)
Q Consensus 134 ~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l 211 (445)
.++||+++.+. .++..+.. ..+...++.++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999987765 44433311 12445688999999999999886 478999999999999999999999999999999
Q ss_pred HHHHH----HcCCCCcceEEEeC-Ch-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCC
Q psy10608 212 VDMLT----QAGCPPGVVNVIHG-AH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSD 285 (445)
Q Consensus 212 ~~~l~----~aGlP~gvv~vv~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~d 285 (445)
++++. ++|+|+|++|+|+| +. +.++.|..||+||+|+||||+++|+.|++.+ +||+++|||||||+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99998 68999999999998 44 4678888999999999999999999999887 5999999999999999999
Q ss_pred CCHHHHHHHHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccc---cCC------------C---CCCCCC
Q psy10608 286 ANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKV---SAG------------N---VPGTDL 345 (445)
Q Consensus 286 aDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~v---G~p------------~---~~~~~~ 345 (445)
||+|.|++.+++++|.|+| .|++++|+ +||+ +|+|+++|.++++++++ |++ . -.+-.+
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv-~V~~~i~d~f~~~l~~~~~~~~~~~~gg~~~~~~~Ptl~~~~~~i~~eEiF 324 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKL-LVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWPTEYL 324 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEE-EEEHHHHHHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTTCCCC
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEE-EEehhhHHHHHHHHHHHHHHcCCeeecChhhhhhCCcccCCCcchhhcccc
Confidence 9999999999999999999 99999999 7777 69999999999998876 321 0 112347
Q ss_pred CCCCCHHHHHHHHHHHHHHHHc--C-CEEEeCCccc------------eEEEeCCCCCCCCCCccCCCCCCccC--CCCc
Q psy10608 346 GPVISPQAKERILSLIQSGVDE--G-ATLLLDGRNL------------KVGINVPIPVPLSMFSFTGSRGSFLG--ENHF 408 (445)
Q Consensus 346 Gpli~~~~~~~v~~~i~~a~~~--G-a~~~~GG~~~------------~V~iN~~~~~~~~~~pfGG~k~SG~G--~~~~ 408 (445)
||++.--.++..++.|+.+-+. | +--+++.... .|+||++... .+..||||.|+||+| +.++
T Consensus 325 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~pfGg~~~SG~g~~~~~~ 403 (427)
T 1o20_A 325 DLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRF-TDGGQFGFGAEIGISTQRFHA 403 (427)
T ss_dssp SSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG-CSTTTTTCSCCSCEECSSSSC
T ss_pred cceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCcc-CCCCCCCCcccccccCCcccC
Confidence 9976544344444444444332 3 1223332210 1999986543 467899999999997 3346
Q ss_pred chHHHHHHhheeEEEEeec
Q psy10608 409 YGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 409 ~g~~~l~~~~~~k~v~~~~ 427 (445)
+|++|+++|++.|+|+..+
T Consensus 404 ~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 404 RGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp CEECCTGGGEEEEEEEECS
T ss_pred CChHHHHHHhceEEEEECC
Confidence 8999999999999998765
No 51
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=5.9e-63 Score=511.47 Aligned_cols=348 Identities=16% Similarity=0.140 Sum_probs=264.5
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCh----Hhhh-HHHHH-HHHHHHHHccC
Q psy10608 68 EMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTL----ADAE-GDVLR-GLQVVEQCCSI 141 (445)
Q Consensus 68 dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~a~~ 141 (445)
.+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||. .++. .|+.. ++..++|+++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 8875 78888 88888888876
Q ss_pred ccccc------Ccccccc--CCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHH
Q psy10608 142 PTIMQ------GETLAGV--AKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVD 213 (445)
Q Consensus 142 ~~~~~------~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~ 213 (445)
.+... ++..+.. ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|.++..|++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 55443 3332211 12445688999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCcceEEEeCCh-hhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecC
Q psy10608 214 MLT----Q----AGCPPGVVNVIHGAH-DAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMS 284 (445)
Q Consensus 214 ~l~----~----aGlP~gvv~vv~g~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~ 284 (445)
++. + +|+|+|+||+|+ +. ++++.|+.||+||+|+||||+++|+.|++.+ +||+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 8 999999999999 65 6889999999999999999999999999877 699999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcccCCcccccceEEEeccc-chHHHHHHHHHHhccc---cCCCC--------------------
Q psy10608 285 DANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEA-VEWLPELKKRAEALKV---SAGNV-------------------- 340 (445)
Q Consensus 285 daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~~-~~f~~~l~~~~~~l~v---G~p~~-------------------- 340 (445)
|||+|.|++.+++++|.|+| .|++++|| +||++ |+|+++|.++++++++ |||.+
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rv-lV~~~id~f~~~l~~~~~~~~v~~~Gdp~~~~~~i~~a~~~~~gG~g~~P 326 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETL-LINPKFSKWWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQC 326 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEE-EECTTSTTHHHHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHHHHT
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEE-EEECCHHHHHHHHHHHHHhcCCeecCCHHHhcccccccceeeccCCCCCC
Confidence 99999999999999999999 99999999 88885 9999999999999987 87632
Q ss_pred -----------CCCCCCCCCCHHHHHHHHHHHHHHHHcC---CEEEeCCccc------------eEEEeCCCCCCCCCCc
Q psy10608 341 -----------PGTDLGPVISPQAKERILSLIQSGVDEG---ATLLLDGRNL------------KVGINVPIPVPLSMFS 394 (445)
Q Consensus 341 -----------~~~~~Gpli~~~~~~~v~~~i~~a~~~G---a~~~~GG~~~------------~V~iN~~~~~~~~~~p 394 (445)
.+-.+||++.-..++..++.|+.+-+.+ +--++..... .|+||++... .+..|
T Consensus 327 tvlv~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~p 405 (468)
T 1vlu_A 327 KTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRF-ADGFR 405 (468)
T ss_dssp TBC-------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGG-CC---
T ss_pred ceeeCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCC
Confidence 0012333332222222222222222111 0001111100 0999986544 36789
Q ss_pred cC-----CCCCCccCCCCcchHHHHHHhheeEEEEeec
Q psy10608 395 FT-----GSRGSFLGENHFYGKQGFYFYTETKTVTQLW 427 (445)
Q Consensus 395 fG-----G~k~SG~G~~~~~g~~~l~~~~~~k~v~~~~ 427 (445)
|| |+|.||+| ++ |++|+++|++.|+|+...
T Consensus 406 fG~Gg~~G~~~SG~g--~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 406 YGFGAEVGISTSKIH--AR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp ----------------------CCSGGGEEEEEEEECS
T ss_pred CCCCCCcceecCCCC--CC-cchHHHHhcceEEEEECC
Confidence 99 99999999 66 999999999999998764
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.3e-56 Score=463.14 Aligned_cols=287 Identities=17% Similarity=0.203 Sum_probs=249.5
Q ss_pred eeCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCChHhhhH-HHHHHHHHH-HHH
Q psy10608 61 VPKATPAEMESAVASAKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKTLADAEG-DVLRGLQVV-EQC 138 (445)
Q Consensus 61 v~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l-~~~ 138 (445)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. ++..+.+.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999999999999999999999999999999999986 777788777 566
Q ss_pred ccCcccccCccccccCCCCceeEEEecCCeEEEECCCCcchhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHH--
Q psy10608 139 CSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLT-- 216 (445)
Q Consensus 139 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~-- 216 (445)
+.. ...+. ++ ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 81 ~~~--~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KDE--QTCGI-LE-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TTC--CCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhc--ccccc-cc-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 542 11222 11 1234456889999999999999999999999999999999999999999999999998888875
Q ss_pred --HcCCCCcceEEEeC-ChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHH
Q psy10608 217 --QAGCPPGVVNVIHG-AHDAVNFICDHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLN 293 (445)
Q Consensus 217 --~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~ 293 (445)
++|+|+|+||+|+| +.+.++.|+.||+|++|+||||+.+++ ++++++||+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 79999999999999 678899999999999999999998654 56677899999999999999999999999999
Q ss_pred HHHHHhhcccCCcccccceEEEecc--cchHHHHHHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEE
Q psy10608 294 QLVGAAFGAAGQRCMALSTVIFVGE--AVEWLPELKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATL 371 (445)
Q Consensus 294 ~iv~~~f~~~GQ~C~a~~rvi~V~~--~~~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~ 371 (445)
.+++++|+|+||.|++++|+ +||+ +|+|+++|+++ +||++++++.+++.++|+++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv-~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAV-IVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEE-EEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG
T ss_pred HHHHHHhCCCCCccCCCcEE-EEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE
Confidence 99999999999999999999 7776 69999998875 389999999999999998655555554
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=91.16 E-value=13 Score=36.88 Aligned_cols=236 Identities=14% Similarity=0.080 Sum_probs=125.8
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-------h-------Hhh--------hHHHHHHHHHHHHHc
Q psy10608 82 TWSKTSIITRQQVLFRLQNIIKANMKQLAENITEEQGKT-------L-------ADA--------EGDVLRGLQVVEQCC 139 (445)
Q Consensus 82 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-------~-------~~a--------~~ev~~~~~~l~~~a 139 (445)
.|+..+..+-.+..+.+.+.++++.|+-....++...+- + ..+ +..+..+.+.++.|.
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 455555566666777788888888777666566554321 0 011 122444455555443
Q ss_pred cCcccccCccccccCCCCceeEEEecCCeEEEECCCC-cch-hhhHhHHHHHhhcCCE-EE-EeCCCCChHHHHHHHHHH
Q psy10608 140 SIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPFN-FPA-MIPLWMFPVAIACGNT-HV-IKPSERDPGACMMLVDML 215 (445)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N-~P~-~~~~~~i~~ALaaGN~-VV-lKps~~~p~~~~~l~~~l 215 (445)
..... ...... ..++.....++.|+-.|++..|.- +|+ .+.++.++||-.+|+. +| .-|++..... -.+.-..
T Consensus 106 ~~Q~~-~~~~~~-~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~-p~iL~AA 182 (423)
T 4gic_A 106 ERQKL-DSWDYR-EADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPELIMAVPAPRGELN-ALVLAAA 182 (423)
T ss_dssp HHHCC-CCEEEE-CTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEEEEECCCGGGCCC-HHHHHHH
T ss_pred Hhccc-CCcccc-cCCCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeEEEecCCCCCCcc-HHHHHHH
Confidence 21111 111111 234556677899999999999953 333 3455668999999986 33 3444321111 1122223
Q ss_pred HHcCCCCcceEEEe-CChhhhhhHh----cCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEec-CCCCHH
Q psy10608 216 TQAGCPPGVVNVIH-GAHDAVNFIC----DHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIM-SDANRS 289 (445)
Q Consensus 216 ~~aGlP~gvv~vv~-g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~-~daDl~ 289 (445)
..+|.- .+.. |+.....+|. .-|.||+|+=.|..-+..+=..-.. ..-+=+.-|-.--+||. +++|.+
T Consensus 183 ~l~Gv~----eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g--~VgIDm~AGPSEilViAD~~a~p~ 256 (423)
T 4gic_A 183 YISGVD----RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG--QVGIDMVAGPSEILVISDGRTDPD 256 (423)
T ss_dssp HHHTCC----EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT--TBEECCCCCCCEEEEEECSCSCHH
T ss_pred HhcCCc----EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC--CcCcccccccceEEEEeCCCCCHH
Confidence 445553 3333 4444445554 3678999999999876432211111 11121222333333333 358999
Q ss_pred HHHHHHHHHhhcccCCcccccceEEEecccchHHHHHHHHHHh
Q psy10608 290 NTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEA 332 (445)
Q Consensus 290 ~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~~~~f~~~l~~~~~~ 332 (445)
..+..++.-+=+... +. -+ ++-.+++|.+++.+.+.+
T Consensus 257 ~vAaDLlsQAEHd~~----a~-~i-LvT~s~~la~~V~~~i~~ 293 (423)
T 4gic_A 257 WIAMDLFSQAEHDED----AQ-AI-LISPDAAHLEAVQASIER 293 (423)
T ss_dssp HHHHHHHHHHTTCTT----CE-EE-EEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCC----Ce-EE-EEeCcHHHHHHHHHHHHH
Confidence 999888876654432 22 23 565666677777666654
No 54
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=69.61 E-value=5.2 Score=34.89 Aligned_cols=143 Identities=10% Similarity=0.024 Sum_probs=87.2
Q ss_pred eeEEEecC-CeEEEECCCCc-chhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHH-cCCCCcceEEEeC-C-hh
Q psy10608 159 IHSYRVPL-GVTAGITPFNF-PAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQ-AGCPPGVVNVIHG-A-HD 233 (445)
Q Consensus 159 ~~~~~~P~-GVv~~I~p~N~-P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~-aGlP~gvv~vv~g-~-~~ 233 (445)
.....-|. |.|+++..-+- +-.+.+.+-...++.|..++. |.-|+ +.|.+ .|+|-..++-++. + +.
T Consensus 19 ~~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pq 89 (178)
T 1vmd_A 19 RYKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQ 89 (178)
T ss_dssp EEEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHH
T ss_pred ceeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCch
Confidence 34444554 76666655443 455556666677778998875 44554 44555 8999665554432 2 33
Q ss_pred hhhhHhcCCCccEEEeeCC-------HHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCc
Q psy10608 234 AVNFICDHPDIRAISFVGS-------DQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQR 306 (445)
Q Consensus 234 ~~~~L~~~~~v~~v~ftGs-------~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~ 306 (445)
+++ ++.+..|++|+||-+ ..-+..|.+.|.....|+.--+ .+++.++.+.+++..
T Consensus 90 I~d-~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnl---------------atA~A~v~ail~~~~-- 151 (178)
T 1vmd_A 90 IGA-MIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITR---------------STADFLISSPLMNDV-- 151 (178)
T ss_dssp HHH-HHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSH---------------HHHHHHHHSGGGGSC--
T ss_pred HHH-HHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc--
Confidence 444 445567999999976 3457889999888777775432 456777788777764
Q ss_pred ccccceEEEecccchHHHHHHHHHHhcccc
Q psy10608 307 CMALSTVIFVGEAVEWLPELKKRAEALKVS 336 (445)
Q Consensus 307 C~a~~rvi~V~~~~~f~~~l~~~~~~l~vG 336 (445)
.++- ..+|.+.+.+++++..+|
T Consensus 152 ---~~~~-----~~d~~~~~~~~~~~~~~~ 173 (178)
T 1vmd_A 152 ---YEKI-----QIDYEEELERRIRKVVEG 173 (178)
T ss_dssp ---EEEE-----EECHHHHHHHHHHHHHC-
T ss_pred ---cccC-----CCCHHHHHHHHHhhcccc
Confidence 1222 234555555555554443
No 55
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=58.86 E-value=12 Score=31.68 Aligned_cols=113 Identities=8% Similarity=-0.004 Sum_probs=72.9
Q ss_pred CeEEEECCCCc-chhhhHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHH-cCCCCcceEEEeC-C-hhhhhhHhcCC
Q psy10608 167 GVTAGITPFNF-PAMIPLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQ-AGCPPGVVNVIHG-A-HDAVNFICDHP 242 (445)
Q Consensus 167 GVv~~I~p~N~-P~~~~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~-aGlP~gvv~vv~g-~-~~~~~~L~~~~ 242 (445)
|.|+++..-+- +-.+.+.+-...++.|..++. |.-|+ +.|.+ .|+|-..++-++. + ..+++ ++.+.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d-~I~~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA-----TGTTG----NLISRATGMNVNAMLSGPMGGDQQVGA-LISEG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEE-----ETTHH----HHHHHHHCCCCEEECCGGGTHHHHHHH-HHHTT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHHhCceeEEEEecCCCCCchHHH-HHHCC
Confidence 65655544333 445555556667778888875 33444 45555 8999666654432 2 33444 44555
Q ss_pred CccEEEeeCC-------HHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccC
Q psy10608 243 DIRAISFVGS-------DQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAG 304 (445)
Q Consensus 243 ~v~~v~ftGs-------~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~G 304 (445)
.|++|+||-+ ..-+..|.+.|.....|+.--+ .+++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 7999999977 5678899999988777775432 456677777777654
No 56
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=54.33 E-value=3.7 Score=34.15 Aligned_cols=77 Identities=9% Similarity=0.018 Sum_probs=48.3
Q ss_pred HHHHhhcCCEEEEeCCCCChHHHHHHHHHHHH-cCCCCcceEEEe-CC-hhhhhhHhcCCCccEEEeeCC-------HHH
Q psy10608 186 FPVAIACGNTHVIKPSERDPGACMMLVDMLTQ-AGCPPGVVNVIH-GA-HDAVNFICDHPDIRAISFVGS-------DQA 255 (445)
Q Consensus 186 i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~-aGlP~gvv~vv~-g~-~~~~~~L~~~~~v~~v~ftGs-------~~~ 255 (445)
-...++.|..++. |.-|+ +.|.+ .|+|-..++-++ ++ ..+++.+ .+..|++|+||-+ ..-
T Consensus 24 ~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-~~geIdlVInt~~pl~~~~h~~D 93 (134)
T 2xw6_A 24 RHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARV-AEGRILAVIFFRDPLTAQPHEPD 93 (134)
T ss_dssp HTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHH-HTTCEEEEEEECCTTTCCTTSCC
T ss_pred HHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHH-HCCCccEEEEccCcccCCCccch
Confidence 3344555666553 34444 44555 799977776566 53 3444544 5557999999977 335
Q ss_pred HHHHHHHhhcCCCcEEE
Q psy10608 256 GKYIYERGAKNGKRVQS 272 (445)
Q Consensus 256 g~~i~~~aa~~~~~~~l 272 (445)
+..|.+.|.....|+.-
T Consensus 94 ~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 94 VQALLRVCDVHGVPLAT 110 (134)
T ss_dssp SHHHHHHHHHHTCCEEC
T ss_pred HHHHHHHHHHcCCCeEc
Confidence 57788887776666644
No 57
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=49.57 E-value=14 Score=33.40 Aligned_cols=67 Identities=15% Similarity=0.157 Sum_probs=44.9
Q ss_pred hHhHHHHHhhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHH
Q psy10608 182 PLWMFPVAIACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQA 255 (445)
Q Consensus 182 ~~~~i~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~ 255 (445)
.+..++-.+.+||-||++.+. +.....+..+|... +|.|.+++++.+.+--. .-.-+.+.++.+..+
T Consensus 20 ~F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s~~Y~~----~~~cnilgls~~v~i 86 (226)
T 3v42_A 20 SFRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYSSQYEE----AYRCNFLGLSPHVQI 86 (226)
T ss_dssp HHHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEESSCCC----TTTCSEEEECTTCCC
T ss_pred HHHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccchhhcc----hhheeeecCCCCccc
Confidence 345677889999999999876 34555566777777 99999999976433211 122455556555443
No 58
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=47.25 E-value=20 Score=29.83 Aligned_cols=62 Identities=15% Similarity=0.149 Sum_probs=44.0
Q ss_pred HHHHHHcCCCCcceEEEeCC------hhhhhhHhcCCCccEEEeeCCH-----HHHHHHHHHhhcCCCcEEEeC
Q psy10608 212 VDMLTQAGCPPGVVNVIHGA------HDAVNFICDHPDIRAISFVGSD-----QAGKYIYERGAKNGKRVQSNM 274 (445)
Q Consensus 212 ~~~l~~aGlP~gvv~vv~g~------~~~~~~L~~~~~v~~v~ftGs~-----~~g~~i~~~aa~~~~~~~lEl 274 (445)
++.|.+.|+|-..|+-++.+ +.+.+.+. +..|++|++|-+. .-+..|.+.|..+..|++-.+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~-~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR-DGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHH-TTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHH-CCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 45667899997777666533 34445554 5579999998654 478889999988888886544
No 59
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=44.35 E-value=1.1e+02 Score=23.96 Aligned_cols=104 Identities=18% Similarity=0.293 Sum_probs=67.8
Q ss_pred EEEeeCCHHHHHHHHHHhhcCCCcEEEeCCCCCeeEecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecccchHHHH
Q psy10608 246 AISFVGSDQAGKYIYERGAKNGKRVQSNMGAKNHGVIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPE 325 (445)
Q Consensus 246 ~v~ftGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~~~~f~~~ 325 (445)
.|.|...+..-+.|.+...+.+.++ +++..|-|-..--+.+ .-|...| .+.- -|++.+.|.+.
T Consensus 5 fvvfssdpeilkeivreikrqgvrv---------vllysdqdekrrrerl--eefekqg-----vdvr-tvedkedfren 67 (162)
T 2l82_A 5 FVVFSSDPEILKEIVREIKRQGVRV---------VLLYSDQDEKRRRERL--EEFEKQG-----VDVR-TVEDKEDFREN 67 (162)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEE---------EEEECCSCHHHHHHHH--HHHHTTT-----CEEE-ECCSHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHHHhCCeEE---------EEEecCchHHHHHHHH--HHHHHcC-----Ccee-eeccHHHHHHH
Confidence 4677888887777777766554454 4456677766554444 2355566 2222 46666888888
Q ss_pred HHHHHHhccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEe
Q psy10608 326 LKKRAEALKVSAGNVPGTDLGPVISPQAKERILSLIQSGVDEGATLLL 373 (445)
Q Consensus 326 l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~ 373 (445)
+.+.-..+. ..++--+++....++++.+|++|++.|..+..
T Consensus 68 ireiweryp-------qldvvvivttddkewikdfieeakergvevfv 108 (162)
T 2l82_A 68 IREIWERYP-------QLDVVVIVTTDDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp HHHHHHHCT-------TCCEEEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhCC-------CCcEEEEEecCcHHHHHHHHHHHHhcCcEEEE
Confidence 877766553 12223344555679999999999999987764
No 60
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=39.83 E-value=2.9e+02 Score=27.31 Aligned_cols=189 Identities=13% Similarity=0.131 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHccCcccccCccccccCCCCceeEEEecCCeEEEECCC-Ccch-hhhHhHHHHHhhcCCEEEE--eCCC
Q psy10608 127 DVLRGLQVVEQCCSIPTIMQGETLAGVAKDMDIHSYRVPLGVTAGITPF-NFPA-MIPLWMFPVAIACGNTHVI--KPSE 202 (445)
Q Consensus 127 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-N~P~-~~~~~~i~~ALaaGN~VVl--Kps~ 202 (445)
.+..+.+.++.|....... ..... ..+|.....++.|+..|++..|. .+|+ .+.++.++||-.+|+.=|+ -|+.
T Consensus 87 ai~~A~~nI~~fH~~Q~~~-~~~~~-~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~aiPAkVAGV~~Iv~~tPp~ 164 (434)
T 1kae_A 87 AMAVAVKNIETFHTAQKLP-PVDVE-TQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPP 164 (434)
T ss_dssp HHHHHHHHHHHHHHTTCCC-CEEEE-EETTEEEEEEEEECSEEEEECCCSSSCCTHHHHHHHHHHHHHTCSEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHhcCC-CceEE-ecCCcEEEEEEeehheEEEEecCCCCCchhHHHHhhccHhhcCCCeEEEECCCC
Confidence 3455666666554322111 10111 12355566788999999999996 3333 3456668999999986543 4442
Q ss_pred CChHHHHHHHHHHHHcCCCCcceEEEe-CChhhhhhHh----cCCCccEEEeeCCHHHHHHHHHHhhcCCCcEEEeC-CC
Q psy10608 203 RDPGACMMLVDMLTQAGCPPGVVNVIH-GAHDAVNFIC----DHPDIRAISFVGSDQAGKYIYERGAKNGKRVQSNM-GA 276 (445)
Q Consensus 203 ~~p~~~~~l~~~l~~aGlP~gvv~vv~-g~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lEl-GG 276 (445)
..|.+ | -..+.+|.- .+.. |+.....+|. .-|.||+|+=.|..-+...=.. .......|-..+ -|
T Consensus 165 i~p~i---L-~AA~l~Gv~----eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~-Vs~~~G~VgIDm~AG 235 (434)
T 1kae_A 165 IADEI---L-YAAQLCGVQ----DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQ-VSQRLDGAAIDMPAG 235 (434)
T ss_dssp CCHHH---H-HHHHHTTCC----EEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHH-HHHCTTSCEESCCCC
T ss_pred CCHHH---H-HHHHHcCCC----EEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHH-hHhhcCccccCCCCC
Confidence 33322 2 223445553 3333 4444445554 3588999999998755432111 100012232222 24
Q ss_pred CCeeEe--cCCCCHHHHHHHHHHHhhcccCCcccccceEEEecccchHHHHHHHHHHh
Q psy10608 277 KNHGVI--MSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEWLPELKKRAEA 332 (445)
Q Consensus 277 k~~~iV--~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~~~~f~~~l~~~~~~ 332 (445)
.+=++| +++||.+..+.+++.-+=+... +. -+ ++-.++++.+++.+.+.+
T Consensus 236 PSEilViAD~tAnp~~vAaDLLsQAEHd~~----a~-ai-LvT~s~~la~~V~~ev~~ 287 (434)
T 1kae_A 236 PSEVLVIADSGATPDFVASDLLSQAEHGPD----SQ-VI-LLTPAADMARRVAEAVER 287 (434)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHHTTCTT----CE-EE-EEESCHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHhccCCC----Cc-EE-EEECCHHHHHHHHHHHHH
Confidence 443333 3468999999888876654432 22 23 555556666666666544
No 61
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=38.22 E-value=42 Score=24.78 Aligned_cols=38 Identities=32% Similarity=0.522 Sum_probs=31.2
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChh
Q psy10608 192 CGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHD 233 (445)
Q Consensus 192 aGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~ 233 (445)
++|-+|+|-.| ..+..++.++.+.++|+ ++-.+.|+..
T Consensus 20 ~~n~vVikT~P---G~A~~vA~~iD~~~~~e-IlGTIAGDDT 57 (79)
T 2zfz_A 20 SGNLAVLRTPP---GAAHYLASAIDRAALPQ-VVGTIAGDDT 57 (79)
T ss_dssp ETTEEEEECST---TCHHHHHHHHHHHCCTT-EEEEEECSSE
T ss_pred cCCEEEEEeCC---CcHHHHHHHHHhCCCCC-eEEEEecCCE
Confidence 79999999664 56889999999998876 8988888543
No 62
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=36.17 E-value=40 Score=24.36 Aligned_cols=37 Identities=22% Similarity=0.317 Sum_probs=30.7
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCCh
Q psy10608 192 CGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAH 232 (445)
Q Consensus 192 aGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~ 232 (445)
.+|-+|+|-.| ..+..++.++.+.++|+ ++..+.|+.
T Consensus 12 ~~n~vVikT~p---G~A~~va~~iD~~~~~e-I~GTIAGDD 48 (71)
T 1b4b_A 12 TGNLLVLRTLP---GNAHAIGVLLDNLDWDE-IVGTICGDD 48 (71)
T ss_dssp ETTEEEEEEST---TCHHHHHHHHHHHCCTT-EEEEEECSS
T ss_pred cCCEEEEEeCC---CcHHHHHHHHHhCCCCC-eEEEEeeCC
Confidence 68999999764 56889999999998876 898888854
No 63
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=35.40 E-value=80 Score=21.95 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=27.4
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 76 AKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++..-..|..+|.++|..+.......-+++..++.
T Consensus 30 ~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 30 LKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556789999999999999888777777666654
No 64
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=32.49 E-value=40 Score=25.15 Aligned_cols=37 Identities=14% Similarity=0.247 Sum_probs=30.8
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCCh
Q psy10608 192 CGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAH 232 (445)
Q Consensus 192 aGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~ 232 (445)
.||-+|+|-.| ..+..++.++.+.++|+ ++..+.|+.
T Consensus 24 ~~n~vVikT~P---G~A~~vA~~iD~~~~~e-IlGTIAGDD 60 (83)
T 2p5m_A 24 ASHMIVLKTMP---GNAQAIGALMDNLDWDE-MMGTICGDD 60 (83)
T ss_dssp ETTEEEEEEST---TCHHHHHHHHHTTTCTT-CCEEEECSS
T ss_pred cCCEEEEEeCC---CcHHHHHHHHHhCCCCC-eEEEEecCC
Confidence 79999999764 56889999999998876 899998854
No 65
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=32.08 E-value=37 Score=25.08 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=32.4
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChh
Q psy10608 192 CGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHD 233 (445)
Q Consensus 192 aGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~ 233 (445)
.+|-+|+|-.| ..+..++.++.+.+.+++++..+.|+..
T Consensus 14 ~~n~vVikT~P---G~A~~va~~iD~~~~~~~I~GTIAGDDT 52 (78)
T 1xxa_A 14 NDAVVVIHTSP---GAAQLIARLLDSLGKAEGILGTIAGDDT 52 (78)
T ss_dssp CSSCEEEEEST---TTHHHHHHHHTTTTTTTTEEEEEECSSE
T ss_pred cCCEEEEEeCC---CcHHHHHHHHHhcCCCCCeEEEEecCCE
Confidence 68999999664 5688899999988888999999988643
No 66
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=30.10 E-value=2.3e+02 Score=26.96 Aligned_cols=126 Identities=17% Similarity=0.142 Sum_probs=72.4
Q ss_pred hhcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEe-CCh--------hhhhhHhcCCCccEEEee---CCHHHHH
Q psy10608 190 IACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIH-GAH--------DAVNFICDHPDIRAISFV---GSDQAGK 257 (445)
Q Consensus 190 LaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~-g~~--------~~~~~L~~~~~v~~v~ft---Gs~~~g~ 257 (445)
...|+.-++- ++-..+..+...+.+.|+ |.=.+|. |+. +..+.|.++|+.+.|... |+..- +
T Consensus 166 ~~~G~vgivS---qSG~l~~~i~~~~~~~g~--G~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~ 239 (334)
T 3mwd_B 166 YRPGSVAYVS---RSGGMSNELNNIISRTTD--GVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-Y 239 (334)
T ss_dssp TSCCSEEEEE---SCHHHHHHHHHHHHHHSS--CEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-H
T ss_pred CCCCCEEEEe---CchHHHHHHHHHHHhcCC--CeEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-H
Confidence 3457765552 222334445555666777 3444554 332 345788999999999875 55554 5
Q ss_pred HHHHHhh--cCCCcEEEeCCCCCee-------------EecCCCCHHHHHHHHHHHhhcccCCcccccceEEEecccchH
Q psy10608 258 YIYERGA--KNGKRVQSNMGAKNHG-------------VIMSDANRSNTLNQLVGAAFGAAGQRCMALSTVIFVGEAVEW 322 (445)
Q Consensus 258 ~i~~~aa--~~~~~~~lElGGk~~~-------------iV~~daDl~~a~~~iv~~~f~~~GQ~C~a~~rvi~V~~~~~f 322 (445)
..++.+. ...||++.--.|.+.. ++..|.. -.....++|..+| ++.+++.+++
T Consensus 240 ~~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~----~a~~~~aa~~~aG--------v~~v~~~~el 307 (334)
T 3mwd_B 240 KICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASE----TAVAKNQALKEAG--------VFVPRSFDEL 307 (334)
T ss_dssp HHHHHHHTTSCCSCEEEEEECTTCC----------------CGGG----SHHHHHHHHHHTT--------CBCCSSGGGH
T ss_pred HHHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCc----cHHHHHHHHHHcC--------CeEcCCHHHH
Confidence 5555443 2569998877777654 2222221 1114455666677 3245556788
Q ss_pred HHHHHHHHHhc
Q psy10608 323 LPELKKRAEAL 333 (445)
Q Consensus 323 ~~~l~~~~~~l 333 (445)
.+.+.+.++++
T Consensus 308 ~~~~~~~~~~l 318 (334)
T 3mwd_B 308 GEIIQSVYEDL 318 (334)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 87777777665
No 67
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=29.50 E-value=2.5e+02 Score=27.46 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=55.2
Q ss_pred HHHHhhc-CCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhhhhhHhcCCCccEEEeeCCHHHHHHHHHHhh
Q psy10608 186 FPVAIAC-GNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDAVNFICDHPDIRAISFVGSDQAGKYIYERGA 264 (445)
Q Consensus 186 i~~ALaa-GN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 264 (445)
.+++|.. .+.-|+--....+..+..+++.+.+.|+|. ..+..++.+..+.|++++++|.|+..-.+..-..+...+.
T Consensus 35 h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~--~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al 112 (444)
T 2ixa_A 35 HVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKP--AKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAM 112 (444)
T ss_dssp HHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCC--CEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHH
T ss_pred HHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCC--CceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 3455544 344333334455666666777666667763 2334333334577888889999998877777777777777
Q ss_pred cCCCcEEEe
Q psy10608 265 KNGKRVQSN 273 (445)
Q Consensus 265 ~~~~~~~lE 273 (445)
+..|.|++|
T Consensus 113 ~aGkhV~~E 121 (444)
T 2ixa_A 113 KAGKIVGME 121 (444)
T ss_dssp HTTCEEEEC
T ss_pred HCCCeEEEe
Confidence 777888777
No 68
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.08 E-value=1.1e+02 Score=22.51 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=27.1
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHH
Q psy10608 76 AKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLA 110 (445)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 110 (445)
++..-..|..|+.++|..+........+++..++.
T Consensus 49 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 49 SKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445689999999999998888877777766654
No 69
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=27.89 E-value=36 Score=29.63 Aligned_cols=40 Identities=25% Similarity=0.418 Sum_probs=33.7
Q ss_pred hcCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChh
Q psy10608 191 ACGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHD 233 (445)
Q Consensus 191 aaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~ 233 (445)
.+||-+|+|-.| ..+..++.++...++|++++-.|.|+..
T Consensus 115 ~~~nlvVIkT~P---G~A~~vA~~ID~~~~~e~IlGTIAGDDT 154 (180)
T 3v4g_A 115 HNQALVVIHTGP---GAAQLIARMLDSLGKSEGILGVVAGDDT 154 (180)
T ss_dssp ECSSCEEEEEST---TCHHHHHHHHHHHCGGGTEEEEEECSSE
T ss_pred ecCCEEEEEeCC---CcHHHHHHHHHhCCCCCCeEEEEecCCE
Confidence 479999999765 5588899999999999999999988643
No 70
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=27.21 E-value=1.6e+02 Score=22.43 Aligned_cols=39 Identities=18% Similarity=0.097 Sum_probs=29.7
Q ss_pred HHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy10608 78 KAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENITEE 116 (445)
Q Consensus 78 ~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e 116 (445)
..-..|..|+.++|..+.......-+++..++.......
T Consensus 51 ~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~ 89 (102)
T 2co9_A 51 IVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASL 89 (102)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 334679999999999999888888777777766544443
No 71
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=26.17 E-value=41 Score=27.46 Aligned_cols=47 Identities=13% Similarity=0.273 Sum_probs=31.0
Q ss_pred cceEEEeCChhhh-hhHhcCCCccEEEeeCCHHHHHHHHHHhhcCCCc
Q psy10608 223 GVVNVIHGAHDAV-NFICDHPDIRAISFVGSDQAGKYIYERGAKNGKR 269 (445)
Q Consensus 223 gvv~vv~g~~~~~-~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~ 269 (445)
|.+.+++|+.+.. ..+.+.+.+.+|.+||+......+.+.+.+...|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCe
Confidence 5688887865433 2333325699999999987777777666544333
No 72
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=25.49 E-value=72 Score=20.93 Aligned_cols=27 Identities=15% Similarity=0.252 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhC
Q psy10608 92 QQVLFRLQNIIKANMKQLAENITEEQG 118 (445)
Q Consensus 92 ~~~L~~~a~~l~~~~~~l~~~~~~e~G 118 (445)
.++|..+...|.+.++++++++-.|..
T Consensus 14 qEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 14 QELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888889999999999888877754
No 73
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=24.43 E-value=1.5e+02 Score=22.66 Aligned_cols=39 Identities=8% Similarity=0.030 Sum_probs=30.8
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy10608 76 AKKAYETWSKTSIITRQQVLFRLQNIIKANMKQLAENIT 114 (445)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~ 114 (445)
++..-..|..|+.+++..+.......-+++..++.....
T Consensus 38 sK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 76 (101)
T 1v63_A 38 MVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVK 76 (101)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445557899999999999998888877788777766443
No 74
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=23.96 E-value=22 Score=35.05 Aligned_cols=66 Identities=12% Similarity=0.166 Sum_probs=35.4
Q ss_pred cCCEEE-------EeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCChhh-hhhHhc-CCCccEEEeeCCHHHHH
Q psy10608 192 CGNTHV-------IKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDA-VNFICD-HPDIRAISFVGSDQAGK 257 (445)
Q Consensus 192 aGN~VV-------lKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~-~~~L~~-~~~v~~v~ftGs~~~g~ 257 (445)
+||-++ +++...--.....|..++.+.|...-.+.+++.+.+. .+.|.+ ....|.|..||++..|.
T Consensus 190 tGdEl~~~~g~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~ 264 (396)
T 1wu2_A 190 TGSELIEEPSEEGFKEGKIVETNSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGD 264 (396)
T ss_dssp ECTTEESSCCHHHHHTTCEECCHHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-------
T ss_pred cCcccccCCCCcccCCCcEecchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCCh
Confidence 466655 3444433345567889999999865556666655433 233321 11379999999998875
No 75
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=23.20 E-value=49 Score=28.12 Aligned_cols=53 Identities=11% Similarity=0.220 Sum_probs=35.6
Q ss_pred ChHHHHHHHHHHHHcCCCCcceEEEeCChhh-hhhH---hcCCCccEEEeeCCHHHH
Q psy10608 204 DPGACMMLVDMLTQAGCPPGVVNVIHGAHDA-VNFI---CDHPDIRAISFVGSDQAG 256 (445)
Q Consensus 204 ~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~-~~~L---~~~~~v~~v~ftGs~~~g 256 (445)
.-..+..|++.+.+.|+..-...+++.+.+. .++| .+..+.|.|..||++..+
T Consensus 29 ~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 29 TDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp TCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3455678899999999866556666655433 3333 332368999999998655
No 76
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=22.70 E-value=1.2e+02 Score=21.83 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=23.7
Q ss_pred HHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q psy10608 77 KKAYETWSKTSIITRQQVLFRLQNIIKANMKQ 108 (445)
Q Consensus 77 ~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (445)
+..-..|..+|.++|..+.......-+++..+
T Consensus 35 k~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~ 66 (80)
T 1gt0_D 35 KRLGAEWKLLSETEKRPFIDEAKRLRALHMKE 66 (80)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34446799999999999888777666665543
No 77
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=22.66 E-value=1.4e+02 Score=21.16 Aligned_cols=30 Identities=7% Similarity=0.065 Sum_probs=22.5
Q ss_pred HHhhhhcCCCHHHHHHHHHHHHHHHHHhHH
Q psy10608 78 KAYETWSKTSIITRQQVLFRLQNIIKANMK 107 (445)
Q Consensus 78 ~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 107 (445)
..-..|..++.++|..+.......-+++..
T Consensus 38 ~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~ 67 (76)
T 1hry_A 38 QLGYQWKMLTEAEKWPFFQEAQKLQAMHRE 67 (76)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 344679999999999988777666655544
No 78
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=21.37 E-value=84 Score=26.26 Aligned_cols=37 Identities=22% Similarity=0.317 Sum_probs=31.2
Q ss_pred cCCEEEEeCCCCChHHHHHHHHHHHHcCCCCcceEEEeCCh
Q psy10608 192 CGNTHVIKPSERDPGACMMLVDMLTQAGCPPGVVNVIHGAH 232 (445)
Q Consensus 192 aGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~ 232 (445)
.+|-+|+|-.| ..+..++.++...++|. ++-.|.|+.
T Consensus 90 ~~n~vVikT~P---G~A~~va~~iD~~~~~e-IlGTIAGDD 126 (149)
T 1b4a_A 90 TGNLLVLRTLP---GNAHAIGVLLDNLDWDE-IVGTICGDD 126 (149)
T ss_dssp ETTEEEEEEST---TCHHHHHHHHHHHTCTT-EEEEEECSS
T ss_pred cCCEEEEEeCC---CcHHHHHHHHHhCCCCC-eEEEEecCC
Confidence 79999999764 56889999999998876 899888854
No 79
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=21.26 E-value=1.3e+02 Score=25.42 Aligned_cols=55 Identities=7% Similarity=0.012 Sum_probs=37.9
Q ss_pred CCChHHHHHHHHHHHHcCCCCcceEEEeCChhh-hhhH---hcCCCccEEEeeCCHHHH
Q psy10608 202 ERDPGACMMLVDMLTQAGCPPGVVNVIHGAHDA-VNFI---CDHPDIRAISFVGSDQAG 256 (445)
Q Consensus 202 ~~~p~~~~~l~~~l~~aGlP~gvv~vv~g~~~~-~~~L---~~~~~v~~v~ftGs~~~g 256 (445)
...-.....|++.|.+.|+.--...+|+.+.+. .+++ ....+.|.|..||++..+
T Consensus 36 ~i~D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 36 PIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred CCCcchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 334456788999999999876556666655443 3333 345668999999998654
No 80
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=20.73 E-value=1.2e+02 Score=22.58 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=26.3
Q ss_pred HHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q psy10608 78 KAYETWSKTSIITRQQVLFRLQNIIKANMKQLAE 111 (445)
Q Consensus 78 ~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 111 (445)
..-..|..|+.++|..+.......-+++..++..
T Consensus 41 ~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~ 74 (92)
T 2crj_A 41 MLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELWA 74 (92)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446799999999999988888777777665543
No 81
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=20.03 E-value=4.7e+02 Score=25.30 Aligned_cols=68 Identities=22% Similarity=0.436 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHcCCCCcceEEEe--CC--hh----hhhhHhcCCCccEEE---e---eCCHHHHHHHHHHhhcC--CCcE
Q psy10608 207 ACMMLVDMLTQAGCPPGVVNVIH--GA--HD----AVNFICDHPDIRAIS---F---VGSDQAGKYIYERGAKN--GKRV 270 (445)
Q Consensus 207 ~~~~l~~~l~~aGlP~gvv~vv~--g~--~~----~~~~L~~~~~v~~v~---f---tGs~~~g~~i~~~aa~~--~~~~ 270 (445)
.+...+.++...|+-+. |.+. |+ .+ ..+.+.++|.++.|. | |-...+++.|.++..+. -+|+
T Consensus 259 l~~~t~D~i~~~G~~~a--N~lD~gG~a~~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPv 336 (397)
T 3ufx_B 259 LVMYTLDLVNRVGGKPA--NFLDIGGGAKADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPV 336 (397)
T ss_dssp HHHHHHHHHHHTTCCBS--EEEECCSCCCHHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCE
T ss_pred HHHHHHHHHHHcCCCcC--CcEecCCCCCHHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcE
Confidence 33445677777776433 4443 32 11 235678899999775 3 33467888888776543 4677
Q ss_pred EEeCCC
Q psy10608 271 QSNMGA 276 (445)
Q Consensus 271 ~lElGG 276 (445)
+.-+.|
T Consensus 337 vv~~~G 342 (397)
T 3ufx_B 337 VMRVAG 342 (397)
T ss_dssp EEEEEE
T ss_pred EEEccC
Confidence 665554
Done!