BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10609
(715 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D0R2|SYTC_MOUSE Threonine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Tars PE=1
SV=2
Length = 722
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/570 (60%), Positives = 390/570 (68%), Gaps = 115/570 (20%)
Query: 190 RITLWDKLKKQYDE---EIAAKVPEEIQVTLPDGKIVPAKSWRTTPYDVAAGISKGLADS 246
R+ +++KLK ++D E AAK + I+VTLPDGK V A+SW+TTPY +A GIS+GLAD+
Sbjct: 56 RLDMYNKLKAEHDSILAEKAAKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADN 115
Query: 247 TIIAK------DWTR---------------------------------ANKSRGNELC-- 265
T++AK D R + G LC
Sbjct: 116 TVVAKVNKVVWDLDRPLETDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYG 175
Query: 266 ---ESSQYFSL------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFK 316
E+ Y+ + VS+ DF +E L K I+KEKQ FERLE+KKE L+EMFK
Sbjct: 176 PPIENGFYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQTFERLEVKKETLLEMFK----- 230
Query: 317 LRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPT 376
YN FK RIL EKVNTPT
Sbjct: 231 -------------------------------------------YNKFKCRILNEKVNTPT 247
Query: 377 TTAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPDNKQL 422
TT YRCGPLIDLCRGPH NSSTYWEGKAD E+LQR+YGISFPD K L
Sbjct: 248 TTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADMETLQRIYGISFPDPKLL 307
Query: 423 KEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRG 482
KEWEK QEEA RDHRKIGR+QEL+FFHELSPGSCFF PKGA+IYNTL+EFIRSEYRKRG
Sbjct: 308 KEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRG 367
Query: 483 FQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWR 542
FQEVV+PN++N +LW TSGHW HYSENMFSF+VE E +ALKPMNCPGHCL+FDHR RSWR
Sbjct: 368 FQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQFALKPMNCPGHCLMFDHRPRSWR 427
Query: 543 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYS 602
ELPLR+ADFGVLHRNELSGALTGLTRVRRFQQDDAHIFC +EQI DEI G LDFLR VYS
Sbjct: 428 ELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYS 487
Query: 603 IFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITI 662
+FGF+F L LSTRPEK+LG++E+WN+AEKQLE SLN FGE W NPGDGAFYGPKIDI I
Sbjct: 488 VFGFSFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKIDIQI 547
Query: 663 TDALKRPHQCATIQLDFQLPIRFNLAYVKN 692
DA+ R HQCATIQLDFQLPIRFNL YV +
Sbjct: 548 KDAIGRYHQCATIQLDFQLPIRFNLTYVSH 577
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 100/145 (68%), Gaps = 38/145 (26%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
+VTLPDGK V A+SW+TTPY +A GIS+GLAD+T++AKVN V
Sbjct: 83 KVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKV------------------ 124
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
+WDLDRPLET+C LELL KF++EEA +V+WHS+AH++GEAM
Sbjct: 125 -------------------VWDLDRPLETDCTLELL-KFEDEEAQAVYWHSSAHIMGEAM 164
Query: 159 ERVYGGCLCYGPPIENGFYYDMYLD 183
ERVYGGCLCYGPPIENGFYYDMYL+
Sbjct: 165 ERVYGGCLCYGPPIENGFYYDMYLE 189
>sp|Q3ZBV8|SYTC_BOVIN Threonine--tRNA ligase, cytoplasmic OS=Bos taurus GN=TARS PE=2 SV=1
Length = 723
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/570 (60%), Positives = 390/570 (68%), Gaps = 115/570 (20%)
Query: 190 RITLWDKLKKQYDEEIAAKVPEE---IQVTLPDGKIVPAKSWRTTPYDVAAGISKGLADS 246
R+ +++KLK ++D +A K ++ I+VTLPDGK V A+SW+TTPY +A GIS+GLAD+
Sbjct: 57 RLEMYNKLKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADN 116
Query: 247 TIIAK------DWTR---------------------------------ANKSRGNELC-- 265
T+IAK D R + G LC
Sbjct: 117 TVIAKVNKAVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYG 176
Query: 266 ---ESSQYFSL------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFK 316
E+ Y+ + VS+ DF +E L K I+KEKQ FERLE+KKE L+EMFK
Sbjct: 177 PPIENGFYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQAFERLEVKKETLLEMFK----- 231
Query: 317 LRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPT 376
YN FK RIL EKVNTPT
Sbjct: 232 -------------------------------------------YNKFKCRILNEKVNTPT 248
Query: 377 TTAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPDNKQL 422
TT YRCGPLIDLCRGPH NSSTYWEGK+D E+LQR+YGISFPD K L
Sbjct: 249 TTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKSDMETLQRIYGISFPDPKML 308
Query: 423 KEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRG 482
KEWEK QEEA RDHRKIGR+QEL+FFHELSPGSCFF PKGA+IYNTL+EFIRSEYRKRG
Sbjct: 309 KEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRSEYRKRG 368
Query: 483 FQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWR 542
FQEVV+PN+YN +LW TSGHW HYSENMFSF+VE E +ALKPMNCPGHCL+FDHR RSWR
Sbjct: 369 FQEVVTPNIYNSRLWVTSGHWEHYSENMFSFEVEKELFALKPMNCPGHCLMFDHRPRSWR 428
Query: 543 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYS 602
ELPLR+ADFGVLHRNELSGALTGLTRVRRFQQDDAHIFC +EQI DEI G LDFLR VYS
Sbjct: 429 ELPLRVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYS 488
Query: 603 IFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITI 662
IFGF+F L LSTRPEK+LG++EVWN+AEKQLE SLN FGE W NPGDGAFYGPKIDI I
Sbjct: 489 IFGFSFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNDFGEKWELNPGDGAFYGPKIDIQI 548
Query: 663 TDALKRPHQCATIQLDFQLPIRFNLAYVKN 692
DA+ R HQCATIQLDFQLPIRFNL +V +
Sbjct: 549 KDAIGRYHQCATIQLDFQLPIRFNLTFVSH 578
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 98/145 (67%), Gaps = 38/145 (26%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
+VTLPDGK V A+SW+TTPY +A GIS+GLAD+T+IAKVN +
Sbjct: 84 KVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNKAV----------------- 126
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
WDLDRPLE +C LELL KF++EEA +V+WHS+AH++GEAM
Sbjct: 127 --------------------WDLDRPLEEDCTLELL-KFEDEEAQAVYWHSSAHIMGEAM 165
Query: 159 ERVYGGCLCYGPPIENGFYYDMYLD 183
ERVYGGCLCYGPPIENGFYYDMYL+
Sbjct: 166 ERVYGGCLCYGPPIENGFYYDMYLE 190
>sp|Q5XHY5|SYTC_RAT Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Tars
PE=2 SV=1
Length = 695
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/570 (60%), Positives = 389/570 (68%), Gaps = 115/570 (20%)
Query: 190 RITLWDKLKKQYDE---EIAAKVPEEIQVTLPDGKIVPAKSWRTTPYDVAAGISKGLADS 246
R+ ++ KLK ++D E AAK + I+VTLPDGK V A+SW+TTPY +A GIS+GLAD+
Sbjct: 29 RLDMYHKLKAEHDSILAEKAAKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADN 88
Query: 247 TIIAK------DWTR---------------------------------ANKSRGNELC-- 265
T++AK D R + G LC
Sbjct: 89 TVVAKVNKVVWDLDRPLETDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYG 148
Query: 266 ---ESSQYFSL------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFK 316
E+ Y+ + VS+ DF +E L K I+KEKQ FERLE+KKE L+EMFK
Sbjct: 149 PPIENGFYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQTFERLEVKKETLLEMFK----- 203
Query: 317 LRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPT 376
YN FK RIL EKVNTPT
Sbjct: 204 -------------------------------------------YNKFKCRILNEKVNTPT 220
Query: 377 TTAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPDNKQL 422
TT YRCGPLIDLCRGPH NSSTYWEGKAD E+LQR+YGISFPD K L
Sbjct: 221 TTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADMETLQRIYGISFPDPKLL 280
Query: 423 KEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRG 482
KEWEK QEEA RDHRKIGR+QEL+FFHELSPGSCFF PKGA+IYNTL+EFIRSEYRKRG
Sbjct: 281 KEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRG 340
Query: 483 FQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWR 542
FQEVV+PN++N +LW TSGHW HYSENMFSF+VE E +ALKPMNCPGHCL+FDHR RSWR
Sbjct: 341 FQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQFALKPMNCPGHCLMFDHRPRSWR 400
Query: 543 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYS 602
ELPLR+ADFGVLHRNELSGALTGLTRVRRFQQDDAHIFC +EQI DEI G LDFLR VYS
Sbjct: 401 ELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYS 460
Query: 603 IFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITI 662
+FGF+F L LSTRPEK+LG++E+WN+AEKQLE SLN FGE W NPGDGAFYGPKIDI I
Sbjct: 461 VFGFSFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKIDIQI 520
Query: 663 TDALKRPHQCATIQLDFQLPIRFNLAYVKN 692
DA+ R HQCATIQLDFQLPIRFNL YV +
Sbjct: 521 KDAIGRYHQCATIQLDFQLPIRFNLTYVSH 550
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 100/145 (68%), Gaps = 38/145 (26%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
+VTLPDGK V A+SW+TTPY +A GIS+GLAD+T++AKVN V+
Sbjct: 56 KVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVV----------------- 98
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
WDLDRPLET+C LELL KF++EEA +V+WHS+AH++GEAM
Sbjct: 99 --------------------WDLDRPLETDCTLELL-KFEDEEAQAVYWHSSAHIMGEAM 137
Query: 159 ERVYGGCLCYGPPIENGFYYDMYLD 183
ERVYGGCLCYGPPIENGFYYDMYL+
Sbjct: 138 ERVYGGCLCYGPPIENGFYYDMYLE 162
>sp|P26639|SYTC_HUMAN Threonine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=TARS PE=1
SV=3
Length = 723
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/570 (59%), Positives = 386/570 (67%), Gaps = 115/570 (20%)
Query: 190 RITLWDKLKKQYDEEIAAKVPEE---IQVTLPDGKIVPAKSWRTTPYDVAAGISKGLADS 246
R+ +++ LK ++D +A K ++ I+VTLPDGK V A+SW+TTPY +A GIS+GLAD+
Sbjct: 57 RLEMYNILKAEHDSILAEKAEKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADN 116
Query: 247 TIIAK------DWTR---------------------------------ANKSRGNELC-- 265
T+IAK D R + G LC
Sbjct: 117 TVIAKVNNVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYG 176
Query: 266 ---ESSQYFSL------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFK 316
E+ Y+ + VS+ DF +E L K I+KEKQ FERLE+KKE L+ MFK
Sbjct: 177 PPIENGFYYDMYLEEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAMFK----- 231
Query: 317 LRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPT 376
YN FK RIL EKVNTPT
Sbjct: 232 -------------------------------------------YNKFKCRILNEKVNTPT 248
Query: 377 TTAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPDNKQL 422
TT YRCGPLIDLCRGPH NSSTYWEGKAD E+LQR+YGISFPD K L
Sbjct: 249 TTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGISFPDPKML 308
Query: 423 KEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRG 482
KEWEK QEEA RDHRKIGR+QEL+FFHELSPGSCFF PKGA+IYN L+EFIRSEYRKRG
Sbjct: 309 KEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRG 368
Query: 483 FQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWR 542
FQEVV+PN++N +LW TSGHW HYSENMFSF+VE E +ALKPMNCPGHCL+FDHR RSWR
Sbjct: 369 FQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKELFALKPMNCPGHCLMFDHRPRSWR 428
Query: 543 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYS 602
ELPLR+ADFGVLHRNELSGALTGLTRVRRFQQDDAHIFC +EQI DEI G LDFLR VYS
Sbjct: 429 ELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTVYS 488
Query: 603 IFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITI 662
+FGF+F L LSTRPEK+LG++EVW++AEKQLE SLN FGE W N GDGAFYGPKIDI I
Sbjct: 489 VFGFSFKLNLSTRPEKFLGDIEVWDQAEKQLENSLNEFGEKWELNSGDGAFYGPKIDIQI 548
Query: 663 TDALKRPHQCATIQLDFQLPIRFNLAYVKN 692
DA+ R HQCATIQLDFQLPIRFNL YV +
Sbjct: 549 KDAIGRYHQCATIQLDFQLPIRFNLTYVSH 578
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 99/145 (68%), Gaps = 38/145 (26%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
+VTLPDGK V A+SW+TTPY +A GIS+GLAD+T+IAKVN
Sbjct: 84 KVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNN------------------- 124
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
V+WDLDRPLE +C LELL KF++EEA +V+WHS+AH++GEAM
Sbjct: 125 ------------------VVWDLDRPLEEDCTLELL-KFEDEEAQAVYWHSSAHIMGEAM 165
Query: 159 ERVYGGCLCYGPPIENGFYYDMYLD 183
ERVYGGCLCYGPPIENGFYYDMYL+
Sbjct: 166 ERVYGGCLCYGPPIENGFYYDMYLE 190
>sp|Q0V9S0|SYTC2_XENTR Probable threonine--tRNA ligase 2, cytoplasmic OS=Xenopus
tropicalis GN=tarsl2 PE=2 SV=1
Length = 814
Score = 633 bits (1633), Expect = e-180, Method: Compositional matrix adjust.
Identities = 322/569 (56%), Positives = 380/569 (66%), Gaps = 115/569 (20%)
Query: 189 ERITLWDKLKKQYDEEIAAKVPEE---IQVTLPDGKIVPAKSWRTTPYDVAAGISKGLAD 245
+R+ L++ LK ++D +AA+ + I++TL DGK V +SW+TTPY VA GISKGLAD
Sbjct: 147 DRLALYETLKNEHDALLAARAAHQSKPIKITLADGKQVDGESWKTTPYQVAIGISKGLAD 206
Query: 246 STIIAK------DWTRANKSRGNE---------------------------------LC- 265
+ +IAK D R + N LC
Sbjct: 207 NVVIAKVNNELWDLDRPLEQDSNVELLKFDSEEAQAVYWHSSAHILGETMENFYGGCLCY 266
Query: 266 ----ESSQYFSL------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPF 315
E+ Y+ + VS+ +FP +E + K I+KEKQPFERLE+ K+ L+EMFK
Sbjct: 267 GPPIENGFYYDMYLDGRGVSSNEFPSLENMCKAIIKEKQPFERLEVSKDLLLEMFK---- 322
Query: 316 KLRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTP 375
YN FK RIL EKV+TP
Sbjct: 323 --------------------------------------------YNKFKCRILNEKVDTP 338
Query: 376 TTTAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPDNKQ 421
TTT YRCGPLIDLCRGPH NSSTYWEG+AD E+LQR+YGISFPD+K
Sbjct: 339 TTTVYRCGPLIDLCRGPHVRHTGKIKTLKIYKNSSTYWEGRADMETLQRIYGISFPDSKL 398
Query: 422 LKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKR 481
+KEWE+ QEEA RDHRKIGR+QELFFFH+LSPGSCFF P+GA IYNTL +FI+ EY+ R
Sbjct: 399 MKEWEQFQEEAKNRDHRKIGRDQELFFFHDLSPGSCFFLPRGAHIYNTLTDFIKGEYQIR 458
Query: 482 GFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSW 541
F EV SPN+YN KLW+ SGHW HYSENMFSF+VE ET+ALKPMNCPGHCL+F HR RSW
Sbjct: 459 NFTEVASPNIYNSKLWEMSGHWQHYSENMFSFEVEKETFALKPMNCPGHCLMFGHRPRSW 518
Query: 542 RELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVY 601
RELPLR ADFGVLHRNELSG L+GLTRVRRFQQDDAHIFCT++QI +E+ G L FL++VY
Sbjct: 519 RELPLRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMDQIQEEMNGCLQFLQSVY 578
Query: 602 SIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDIT 661
+FGFTF L LSTRPE YLGE+E+WN+AEKQLE+SLN FGEPW NPGDGAFYGPKIDI
Sbjct: 579 KVFGFTFQLHLSTRPENYLGEIEIWNEAEKQLESSLNQFGEPWKLNPGDGAFYGPKIDIK 638
Query: 662 ITDALKRPHQCATIQLDFQLPIRFNLAYV 690
I DA+ R HQCATIQLDFQLPIRFNL YV
Sbjct: 639 IKDAIGRYHQCATIQLDFQLPIRFNLTYV 667
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 94/148 (63%), Gaps = 38/148 (25%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
++TL DGK V +SW+TTPY VA GISKGLAD+ +IAKVN
Sbjct: 175 KITLADGKQVDGESWKTTPYQVAIGISKGLADNVVIAKVN-------------------- 214
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
NE LWDLDRPLE + +ELL KFD+EEA +V+WHS+AH+LGE M
Sbjct: 215 ---NE--------------LWDLDRPLEQDSNVELL-KFDSEEAQAVYWHSSAHILGETM 256
Query: 159 ERVYGGCLCYGPPIENGFYYDMYLDGEA 186
E YGGCLCYGPPIENGFYYDMYLDG
Sbjct: 257 ENFYGGCLCYGPPIENGFYYDMYLDGRG 284
>sp|A2RTX5|SYTC2_HUMAN Probable threonine--tRNA ligase 2, cytoplasmic OS=Homo sapiens
GN=TARSL2 PE=1 SV=1
Length = 802
Score = 605 bits (1560), Expect = e-172, Method: Compositional matrix adjust.
Identities = 312/571 (54%), Positives = 368/571 (64%), Gaps = 117/571 (20%)
Query: 189 ERITLWDKLKKQYDEEIA-----AKVPEEIQVTLPDGKIVPAKSWRTTPYDVAAGISKGL 243
ER+ L++ LKK + +A I V + DG+ V + W+TTPY VAA IS+ L
Sbjct: 133 ERLKLFEILKKDHQLLLAIYGKKGDTSNIITVRVADGQTVQGEVWKTTPYQVAAEISQEL 192
Query: 244 ADSTIIAK------DWTRANKSR---------------------------------GNEL 264
A+ST+IAK D R + G L
Sbjct: 193 AESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYWHSSAHILGEAMELYYGGHL 252
Query: 265 C-----ESSQYFSL------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYN 313
C E+ Y+ + VS+ + +E + K I+KEKQPFERLE+ KE L+EMFK
Sbjct: 253 CYGPPIENGFYYDMFIEDRAVSSTELSALENICKAIIKEKQPFERLEVSKEILLEMFK-- 310
Query: 314 PFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVN 373
YN FK RIL EKVN
Sbjct: 311 ----------------------------------------------YNKFKCRILNEKVN 324
Query: 374 TPTTTAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPDN 419
T TTT YRCGPLIDLC+GPH NSSTYWEG + E+LQR+YGISFPDN
Sbjct: 325 TATTTVYRCGPLIDLCKGPHVRHTGKIKTIKIFKNSSTYWEGNPEMETLQRIYGISFPDN 384
Query: 420 KQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYR 479
K +++WEK QEEA RDHRKIG+EQELFFFH+LSPGSCFF P+GAFIYNTL +FIR EY
Sbjct: 385 KMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYH 444
Query: 480 KRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVR 539
KR F EV+SPN+YN KLW+ SGHW HYSENMF+F++E +T+ALKPMNCPGHCL+F HR R
Sbjct: 445 KRDFTEVLSPNMYNSKLWEASGHWQHYSENMFTFEIEKDTFALKPMNCPGHCLMFAHRPR 504
Query: 540 SWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRN 599
SWRE+P+R ADFGVLHRNELSG L+GLTRVRRFQQDDAHIFCTVEQI +EI G L FL++
Sbjct: 505 SWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQS 564
Query: 600 VYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKID 659
VYS FGF+F L LSTRPE +LGE+E+WN+AEKQL+ SL FGEPW NPGDGAFYGPKID
Sbjct: 565 VYSTFGFSFQLNLSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWKMNPGDGAFYGPKID 624
Query: 660 ITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
I I DA+ R HQCATIQLDFQLPIRFNL YV
Sbjct: 625 IKIKDAIGRYHQCATIQLDFQLPIRFNLTYV 655
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 89/147 (60%), Gaps = 38/147 (25%)
Query: 40 VTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLNK 99
V + DG+ V + W+TTPY VAA IS+ LA+ST+IAKVN
Sbjct: 164 VRVADGQTVQGEVWKTTPYQVAAEISQELAESTVIAKVN--------------------- 202
Query: 100 FDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAME 159
G LWDLDRPLE + LELL FDNEEA +V+WHS+AH+LGEAME
Sbjct: 203 ----------------GELWDLDRPLEGDSSLELLT-FDNEEAQAVYWHSSAHILGEAME 245
Query: 160 RVYGGCLCYGPPIENGFYYDMYLDGEA 186
YGG LCYGPPIENGFYYDM+++ A
Sbjct: 246 LYYGGHLCYGPPIENGFYYDMFIEDRA 272
>sp|Q8BLY2|SYTC2_MOUSE Probable threonine--tRNA ligase 2, cytoplasmic OS=Mus musculus
GN=Tarsl2 PE=2 SV=1
Length = 790
Score = 600 bits (1547), Expect = e-170, Method: Compositional matrix adjust.
Identities = 310/572 (54%), Positives = 369/572 (64%), Gaps = 120/572 (20%)
Query: 189 ERITLWDKLKKQYDEEIAAKVPEE------IQVTLPDGKIVPAKSWRTTPYDVAAGISKG 242
ER+ L++ LK D ++ E+ I V + GK V + W+TTPY VAAGISK
Sbjct: 122 ERLQLFETLKT--DHQLLPATQEKKNTNNVISVRVAGGKTVQGERWKTTPYQVAAGISKE 179
Query: 243 LADSTIIAK------DWTRANKSR---------------------------------GNE 263
LA+ T+IAK D R + G
Sbjct: 180 LAEHTVIAKVNGVLWDLDRPLEGDSTVELLMFDNEEAQAVYWHSSAHILGEAMELYYGGH 239
Query: 264 LC-----ESSQYFSL------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKY 312
LC E+ Y+ + VS+ + +E + K I+KEKQPFERLE+ K+ L+EMFK
Sbjct: 240 LCYGPPIENGFYYDMFIEDRVVSSTELSALENICKTIIKEKQPFERLEVSKDTLLEMFK- 298
Query: 313 NPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKV 372
YN FK RILKEKV
Sbjct: 299 -----------------------------------------------YNKFKCRILKEKV 311
Query: 373 NTPTTTAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPD 418
+TPTTT YRCGPLIDLC+GPH NSSTYWEG + E+LQR+YGISFPD
Sbjct: 312 DTPTTTVYRCGPLIDLCKGPHVRHTGKIKAIKIFKNSSTYWEGNPEMETLQRIYGISFPD 371
Query: 419 NKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEY 478
+K +K+WEK QEEA RDHRKIG+EQELFFFH+LSPGSCFF P+GAFIYN L++FIR EY
Sbjct: 372 SKMMKDWEKFQEEAKSRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNALMDFIREEY 431
Query: 479 RKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRV 538
KR F EV+SPN+YN KLW+TSGHW HYS NMF+FDVE +T+ALKPMNCPGHCL+F HR
Sbjct: 432 HKRNFTEVLSPNMYNSKLWETSGHWQHYSNNMFTFDVEKDTFALKPMNCPGHCLMFAHRP 491
Query: 539 RSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLR 598
RSWRE+P+R ADFGVLHRNELSG L+GLTRVRRFQQDDAHIFC VEQI +EI G L FL+
Sbjct: 492 RSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQ 551
Query: 599 NVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKI 658
+VYS FGF+F L LSTRPE +LGE+E+W++AE+QL+ SL FG+PW NPGDGAFYGPKI
Sbjct: 552 SVYSTFGFSFQLNLSTRPEHFLGEIEIWDEAERQLQNSLVEFGKPWKINPGDGAFYGPKI 611
Query: 659 DITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
DI I DA+ R HQCATIQLDFQLPIRFNL YV
Sbjct: 612 DIKIKDAIGRYHQCATIQLDFQLPIRFNLTYV 643
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 91/153 (59%), Gaps = 38/153 (24%)
Query: 31 KKCIGALNQVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLET 90
KK + V + GK V + W+TTPY VAAGISK LA+ T+IAKVN
Sbjct: 143 KKNTNNVISVRVAGGKTVQGERWKTTPYQVAAGISKELAEHTVIAKVN------------ 190
Query: 91 NCKLELLNKFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHST 150
GVLWDLDRPLE + +ELL FDNEEA +V+WHS+
Sbjct: 191 -------------------------GVLWDLDRPLEGDSTVELL-MFDNEEAQAVYWHSS 224
Query: 151 AHVLGEAMERVYGGCLCYGPPIENGFYYDMYLD 183
AH+LGEAME YGG LCYGPPIENGFYYDM+++
Sbjct: 225 AHILGEAMELYYGGHLCYGPPIENGFYYDMFIE 257
>sp|P52709|SYTC_CAEEL Threonine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=trs-1 PE=2 SV=1
Length = 725
Score = 598 bits (1542), Expect = e-170, Method: Compositional matrix adjust.
Identities = 309/566 (54%), Positives = 367/566 (64%), Gaps = 113/566 (19%)
Query: 189 ERITLWDKLKKQYDEEIAAKVPEEIQVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTI 248
ERI LWDKLK +YD EIAAK E IQ+TLPDGKI K+WRTTP+++A ISKGLA++ +
Sbjct: 58 ERIKLWDKLKAEYDAEIAAKESEPIQITLPDGKIHEGKTWRTTPFEIAERISKGLAEAAV 117
Query: 249 IAK------DWTRANKSR---------------------------------GNELC---- 265
IAK D R + G LC
Sbjct: 118 IAKVNGAVWDLDRPFEGNAKLELLKFDDDEAKQVFWHSSAHVLGEAMERYCGGHLCYGPP 177
Query: 266 -ESSQYFSL------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKLR 318
+ Y+ + + DFP ++ ++K VK+KQ FERLEM KEDL+EMFK
Sbjct: 178 IQEGFYYDMWHENRTICPDDFPKIDQIVKAAVKDKQKFERLEMTKEDLLEMFK------- 230
Query: 319 ILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTT 378
YN FK+RI+ EK++TP TT
Sbjct: 231 -----------------------------------------YNEFKVRIITEKIHTPKTT 249
Query: 379 AYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPDNKQLKE 424
YRCGPLIDLCRGPH NSS+YWEGKADAESLQR+YGISFPD+KQLKE
Sbjct: 250 VYRCGPLIDLCRGPHVRHTGKVKAMAITKNSSSYWEGKADAESLQRLYGISFPDSKQLKE 309
Query: 425 WEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQ 484
W+KLQEEAAKRDHRK+G+E +LFFFH+LSPGS F+ PKGA IYN LV+FIR +YR+RGF
Sbjct: 310 WQKLQEEAAKRDHRKLGKEHDLFFFHQLSPGSAFWYPKGAHIYNKLVDFIRKQYRRRGFT 369
Query: 485 EVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWREL 544
EV++PN+YN KLW+TSGHW HYSE+MF +VE E + LKPMNCPGHCL+F H ++ EL
Sbjct: 370 EVITPNMYNKKLWETSGHWQHYSEDMFKIEVEKEEFGLKPMNCPGHCLMFGHMPHTYNEL 429
Query: 545 PLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVY-SI 603
P R ADFGVLHRNE+SGALTGLTRVRRFQQDDAHIFC +QI +EI LDFL Y +
Sbjct: 430 PFRFADFGVLHRNEMSGALTGLTRVRRFQQDDAHIFCRQDQISEEIKQCLDFLEYAYEKV 489
Query: 604 FGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITIT 663
FGFTF L LSTRPE +LG +E W+KAE L +LN+ G W NPGDGAFYGPKIDITI
Sbjct: 490 FGFTFKLNLSTRPEGFLGNIETWDKAEADLTNALNASGRKWVLNPGDGAFYGPKIDITIQ 549
Query: 664 DALKRPHQCATIQLDFQLPIRFNLAY 689
DALKR QCATIQLDFQLP +F+L+Y
Sbjct: 550 DALKRNFQCATIQLDFQLPNQFDLSY 575
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 89/143 (62%), Gaps = 38/143 (26%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
Q+TLPDGKI K+WRTTP+++A ISKGLA++ +IAKVN
Sbjct: 83 QITLPDGKIHEGKTWRTTPFEIAERISKGLAEAAVIAKVN-------------------- 122
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
G +WDLDRP E N KLELL KFD++EA VFWHS+AHVLGEAM
Sbjct: 123 -----------------GAVWDLDRPFEGNAKLELL-KFDDDEAKQVFWHSSAHVLGEAM 164
Query: 159 ERVYGGCLCYGPPIENGFYYDMY 181
ER GG LCYGPPI+ GFYYDM+
Sbjct: 165 ERYCGGHLCYGPPIQEGFYYDMW 187
>sp|A6QNM8|SYTC2_BOVIN Probable threonine--tRNA ligase 2, cytoplasmic OS=Bos taurus
GN=TARSL2 PE=2 SV=1
Length = 724
Score = 545 bits (1404), Expect = e-154, Method: Compositional matrix adjust.
Identities = 284/573 (49%), Positives = 362/573 (63%), Gaps = 121/573 (21%)
Query: 189 ERITLWDKLKKQYDEEIAAKVPEE-------IQVTLPDGKIVPAKSWRTTPYDVAAGISK 241
ER+ ++ LKK D ++ + E+ I V + DG+ V ++W+TTPY VAA IS+
Sbjct: 131 ERLKFFEILKK--DHQLLLAIYEKKGDSSNVITVRVADGRTVKGEAWKTTPYQVAAEISQ 188
Query: 242 GLA---------------------DSTI----------IAKDWTRANKSRGNEL------ 264
LA D+T+ A W + G L
Sbjct: 189 ELAETTVVAKVNGELWDLDRPLEGDATVELLTFEDEEARAVYWHSSAHVLGEALELHYGG 248
Query: 265 ---C----ESSQYFSL------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFK 311
C + S ++ + VS+ + PV+E + + I+KE+QPFERLE+ + L+++FK
Sbjct: 249 LLCCSPPGDGSFHYDVYLEDRAVSSAELPVLESMCQAIIKEQQPFERLEVSTKVLLDLFK 308
Query: 312 YNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEK 371
YN FK RILKEK
Sbjct: 309 ------------------------------------------------YNKFKCRILKEK 320
Query: 372 VNTPTTTAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFP 417
V TPTTT YRCGPL++LC+GPH NS YW + E LQRVYG+SFP
Sbjct: 321 VATPTTTVYRCGPLVELCKGPHVRHTGTIKVIKIFKNSLAYWADNPEMEMLQRVYGVSFP 380
Query: 418 DNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSE 477
D +++ WE+LQEEA RDHR IG+EQELFFFH+LSPGSCFF P+GA IYNTL++FIR +
Sbjct: 381 DEQRMAAWEELQEEARARDHRTIGKEQELFFFHDLSPGSCFFLPRGACIYNTLIDFIREQ 440
Query: 478 YRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHR 537
+ +R F EV+SPN+Y+ KLW+ SGHW HYSENMF+FD++ +T+ALKPMNCPGHCL+F HR
Sbjct: 441 HHQRNFTEVLSPNMYSCKLWEASGHWQHYSENMFTFDIDKDTFALKPMNCPGHCLMFAHR 500
Query: 538 VRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFL 597
RSWRE+P+R+ADFGVLHRNE SGAL+GLT VRRFQQDDAHIFCTV Q+ +EI G L FL
Sbjct: 501 PRSWREMPIRLADFGVLHRNEPSGALSGLTCVRRFQQDDAHIFCTVGQLEEEIKGCLQFL 560
Query: 598 RNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPK 657
++VYS FGF+F L LSTRPE +LG++E+W++AEKQL+ SL FG+PW NPG+GAFYGPK
Sbjct: 561 QSVYSTFGFSFQLNLSTRPENFLGKIELWDEAEKQLQNSLMEFGKPWKINPGEGAFYGPK 620
Query: 658 IDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
ID+ I DAL R HQCATIQLDFQLPIRFNL YV
Sbjct: 621 IDLEIKDALGRYHQCATIQLDFQLPIRFNLTYV 653
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 38/147 (25%)
Query: 40 VTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLNK 99
V + DG+ V ++W+TTPY VAA IS+ LA++T++AKVN
Sbjct: 162 VRVADGRTVKGEAWKTTPYQVAAEISQELAETTVVAKVN--------------------- 200
Query: 100 FDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAME 159
G LWDLDRPLE + +ELL F++EEA +V+WHS+AHVLGEA+E
Sbjct: 201 ----------------GELWDLDRPLEGDATVELLT-FEDEEARAVYWHSSAHVLGEALE 243
Query: 160 RVYGGCLCYGPPIENGFYYDMYLDGEA 186
YGG LC PP + F+YD+YL+ A
Sbjct: 244 LHYGGLLCCSPPGDGSFHYDVYLEDRA 270
>sp|P04801|SYTC_YEAST Threonine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=THS1 PE=1 SV=2
Length = 734
Score = 537 bits (1383), Expect = e-151, Method: Compositional matrix adjust.
Identities = 286/590 (48%), Positives = 368/590 (62%), Gaps = 102/590 (17%)
Query: 180 MYLDGEAQM--ERITLWDKLKKQYDEEIAAKVPEEIQVTLPDGKIVPAKSWRTTPYDVAA 237
+YLD E ERI ++D+L+K+Y++++A+ +++ L DG + A SW TTP D+A
Sbjct: 40 LYLDPEPTFIEERIEMFDRLQKEYNDKVASMPRVPLKIVLKDGAVKEATSWETTPMDIAK 99
Query: 238 GISKGLADSTIIAK------DWTRANKSRGNE-------------------------LCE 266
GISK LAD I+K D R + NE L E
Sbjct: 100 GISKSLADRLCISKVNGQLWDLDRPFEGEANEEIKLELLDFESDEGKKVFWHSSAHVLGE 159
Query: 267 SSQ-YFSLVSTLDFPVMEGL---------MKDI-----------------------VKEK 293
S + + L P +G MKDI +K+K
Sbjct: 160 SCECHLGAHICLGPPTDDGFFYEMAVRDSMKDISESPERTVSQADFPGLEGVAKNVIKQK 219
Query: 294 QPFERLEMKKEDLIEMFKYNPFKLRILKEKV-NTPTTTAYRCGPLIDLCRGPHVRHTGKI 352
Q FERL M KEDL++MF Y+ +K +++ KV + TT YRCG LIDLC GPH+ HTG+I
Sbjct: 220 QKFERLVMSKEDLLKMFHYSKYKTYLVQTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRI 279
Query: 353 KAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSSTYWEGKADAESLQRVY 412
KAFK+ K NSS Y+ G A +SLQRVY
Sbjct: 280 KAFKLLK----------------------------------NSSCYFLGDATNDSLQRVY 305
Query: 413 GISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVE 472
GISFPD K + K EA+ RDHRKIG+EQELF F+E+SPGSCF+ P G IYNTLV+
Sbjct: 306 GISFPDKKLMDAHLKFLAEASMRDHRKIGKEQELFLFNEMSPGSCFWLPHGTRIYNTLVD 365
Query: 473 FIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCL 532
+R+EYRKRG++EV++PN+YN KLW+TSGHWA+Y ENMF+F+VE ET+ LKPMNCPGHCL
Sbjct: 366 LLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKETFGLKPMNCPGHCL 425
Query: 533 IFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVG 592
+F R RS+RELP R+ADFGV+HRNE SGAL+GLTRVRRFQQDDAHIFCT +QI EI
Sbjct: 426 MFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTHDQIESEIEN 485
Query: 593 ALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGA 652
+FL+ +Y +FGF F + LSTRPEKY+G++E W+ AE +LE++L +G W N GDGA
Sbjct: 486 IFNFLQYIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGNWEINAGDGA 545
Query: 653 FYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAY-VKNVRAQTHELP 701
FYGPKIDI I+DAL+R HQCATIQLDFQLP RF L + K+ ++++E P
Sbjct: 546 FYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELEFKSKDQDSESYERP 595
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 75/146 (51%), Gaps = 42/146 (28%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
++ L DG + A SW TTP D+A GISK LAD I+KVNG
Sbjct: 76 KIVLKDGAVKEATSWETTPMDIAKGISKSLADRLCISKVNGQ------------------ 117
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNC----KLELLNKFDNEEASSVFWHSTAHVL 154
LWDLDRP E KLELL+ F+++E VFWHS+AHVL
Sbjct: 118 -------------------LWDLDRPFEGEANEEIKLELLD-FESDEGKKVFWHSSAHVL 157
Query: 155 GEAMERVYGGCLCYGPPIENGFYYDM 180
GE+ E G +C GPP ++GF+Y+M
Sbjct: 158 GESCECHLGAHICLGPPTDDGFFYEM 183
>sp|P87144|SYTC_SCHPO Threonine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ths1 PE=3 SV=1
Length = 703
Score = 536 bits (1381), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/568 (49%), Positives = 357/568 (62%), Gaps = 115/568 (20%)
Query: 189 ERITLWDKLKKQYDEEIAAKVPEEIQVTLPDGKIVPAKSWRTTPYDVAA----GISKGLA 244
R+ L+DKL+K+Y E +A K EEI +TLPDGK++ SW TTP +AA G++ +
Sbjct: 25 HRLDLFDKLQKEYKESLATKPREEIDITLPDGKVIKGTSWETTPISIAASISKGLADRVT 84
Query: 245 DSTIIAKDW--TRANKSRGN-ELCE------------SSQYF------------------ 271
+ + + W TR ++ +LC+ SS +
Sbjct: 85 VAIVNGEPWDLTRPLEASCTLKLCDFNDPEGKRVFWHSSAHILGEATELSFHCHLCIGPP 144
Query: 272 --------------SLVSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKL 317
+++ D+ +E K +K+KQPFERL + KE L+EMF+
Sbjct: 145 TDEGFFYEMGIDNGRVITNDDYSSIESYAKQAIKQKQPFERLVISKEGLLEMFR------ 198
Query: 318 RILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKV-NTPT 376
YN +K I++ K+ + +
Sbjct: 199 ------------------------------------------YNKYKQYIIQTKIPDGAS 216
Query: 377 TTAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPDNKQL 422
TT YRCGPLIDLC GPH NSS+Y+ G A +SLQRVYGISFPDNKQ+
Sbjct: 217 TTVYRCGPLIDLCTGPHVPHTGRIKSFAVTKNSSSYFLGDAKNDSLQRVYGISFPDNKQM 276
Query: 423 KEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRG 482
+E++ EAAKRDHRKIGR+QELFFF+E+SPGSCFF P GA IYNTL++++R +Y KRG
Sbjct: 277 QEYKTFLAEAAKRDHRKIGRDQELFFFNEISPGSCFFLPHGARIYNTLLKYMRYQYSKRG 336
Query: 483 FQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWR 542
+QEV++PN+YNV LW+TSGHW +YSENMFSFD+E E YALKPMNCPGHC++F R RS+R
Sbjct: 337 YQEVITPNMYNVNLWKTSGHWNNYSENMFSFDIEKEKYALKPMNCPGHCVMFKSRDRSYR 396
Query: 543 ELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYS 602
+LP R+ADFGVLHRNE SGAL+GLTRVRRFQQDDAHIFCT +Q+ EI G DFL+ VY
Sbjct: 397 DLPWRVADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTPDQVRSEIEGCFDFLKEVYG 456
Query: 603 IFGFTFNLRLSTRP-EKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDIT 661
FGFTF+L LSTRP EKYLG+L W+KAE QL+A+L++ G W N GDGAFYGPKIDIT
Sbjct: 457 TFGFTFHLELSTRPEEKYLGDLATWDKAEAQLKAALDASGYKWELNAGDGAFYGPKIDIT 516
Query: 662 ITDALKRPHQCATIQLDFQLPIRFNLAY 689
+ DALKR HQCATIQLDFQLP RF L +
Sbjct: 517 VFDALKRQHQCATIQLDFQLPERFQLEF 544
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 75/144 (52%), Gaps = 38/144 (26%)
Query: 40 VTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLNK 99
+TLPDGK++ SW TTP +AA ISKGLAD +A VNG WDL RPLE +C L+L +
Sbjct: 51 ITLPDGKVIKGTSWETTPISIAASISKGLADRVTVAIVNGEPWDLTRPLEASCTLKLCD- 109
Query: 100 FDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAME 159
F++ E V FWHS+AH+LGEA E
Sbjct: 110 FNDPEGKRV-------------------------------------FWHSSAHILGEATE 132
Query: 160 RVYGGCLCYGPPIENGFYYDMYLD 183
+ LC GPP + GF+Y+M +D
Sbjct: 133 LSFHCHLCIGPPTDEGFFYEMGID 156
>sp|O04630|SYTM_ARATH Threonine--tRNA ligase, mitochondrial OS=Arabidopsis thaliana
GN=THRRS PE=2 SV=3
Length = 709
Score = 524 bits (1349), Expect = e-147, Method: Compositional matrix adjust.
Identities = 270/560 (48%), Positives = 352/560 (62%), Gaps = 86/560 (15%)
Query: 189 ERITLWDKLKKQYDEEIAAKVPEEIQVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTI 248
+RI L+++++ E + + + I+VTLPDG + K W TTP D+AA ISKGLA+S +
Sbjct: 51 KRIKLFEQIQANQLENLKSLPHDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANSAL 110
Query: 249 IAK------DWTR--------------ANKSR-------------------GNELC---- 265
I+ D R ++K R G +LC
Sbjct: 111 ISAVDDVLWDMNRPLEGDCKLELFKFDSDKGRDTLWHSSAHILGQALEQEYGCQLCIGPC 170
Query: 266 ----ESSQYFSLVSTL-----DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFK 316
E Y L FP +E KE QPFER+E+ K+ +EMF N FK
Sbjct: 171 TTRGEGFYYDGFYGELGLSDNHFPSIEAGAAKAAKEAQPFERIEVTKDQALEMFSENNFK 230
Query: 317 LRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPT 376
+ ++ T T YRCGPL+DLCRGPH+ +T +KAFK +
Sbjct: 231 VELINGLPADMTITVYRCGPLVDLCRGPHIPNTSFVKAFKCLR----------------- 273
Query: 377 TTAYRCGPLIDLCRGPHNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRD 436
SS YW+G D ESLQRVYGIS+PD KQLK++ + EEA K D
Sbjct: 274 -----------------ASSAYWKGDKDRESLQRVYGISYPDQKQLKKYLQFLEEAKKYD 316
Query: 437 HRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKL 496
HR +G++QELFF H+LSPGS FF P G +YN L++FI+++Y RG+ EV++PN+YN++L
Sbjct: 317 HRLLGQKQELFFSHQLSPGSYFFLPLGTRVYNRLMDFIKNQYWHRGYTEVITPNMYNMEL 376
Query: 497 WQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHR 556
WQTSGH +Y +NMF+F++E + + LKPMNCPGHCLIF HRVRS+RELP+R+ADFGVLHR
Sbjct: 377 WQTSGHADNYKDNMFTFNIEKQEFGLKPMNCPGHCLIFQHRVRSYRELPMRLADFGVLHR 436
Query: 557 NELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRP 616
NE SGAL+GLTRVRRFQQDDAHIFCT EQ+ E+ G L+F+ VY +FGFT+ L+LSTRP
Sbjct: 437 NEASGALSGLTRVRRFQQDDAHIFCTTEQVKGEVQGVLEFIDYVYKVFGFTYELKLSTRP 496
Query: 617 EKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQ 676
EKYLG+LE W+KAE L+ ++ +FG+P N GDGAFYGPKIDIT++DA+ R QCAT+Q
Sbjct: 497 EKYLGDLETWDKAEADLKEAIEAFGKPLVLNEGDGAFYGPKIDITVSDAMNRKFQCATLQ 556
Query: 677 LDFQLPIRFNLAYVKNVRAQ 696
LDFQLPIRFNL Y A+
Sbjct: 557 LDFQLPIRFNLEYAAEDEAK 576
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 78/145 (53%), Gaps = 40/145 (27%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
+VTLPDG + K W TTP D+AA ISKGLA+S +I+ V+ VLWD++RPLE +CKLEL
Sbjct: 76 KVTLPDGNVKEGKKWETTPMDIAAQISKGLANSALISAVDDVLWDMNRPLEGDCKLELF- 134
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
KFD +++ WHS+AH+LG+A+
Sbjct: 135 KFD-------------------------------------SDKGRDTLWHSSAHILGQAL 157
Query: 159 ERVYGGCLCYGPPIEN--GFYYDMY 181
E+ YG LC GP GFYYD +
Sbjct: 158 EQEYGCQLCIGPCTTRGEGFYYDGF 182
>sp|Q54J66|SYTC1_DICDI Probable threonine--tRNA ligase 1, cytoplasmic OS=Dictyostelium
discoideum GN=thrS1 PE=3 SV=1
Length = 710
Score = 524 bits (1349), Expect = e-147, Method: Compositional matrix adjust.
Identities = 275/578 (47%), Positives = 342/578 (59%), Gaps = 113/578 (19%)
Query: 189 ERITLWDKLKKQYDEEIAAKVPEEIQVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTI 248
ERI +W+ LK ++ E + E I VTLPDGK+V +TTPYD+A GIS+GLADS +
Sbjct: 52 ERIEIWESLKAKHLESLKDMKEEPINVTLPDGKVVAGIKNKTTPYDIAKGISRGLADSIV 111
Query: 249 IAK-------DWTR---------------------------------ANKSRGNELC--- 265
+K D +R + G +LC
Sbjct: 112 SSKVNGEQIWDISRPLEADCNLQLCKFDSEEGKKTFWHSSAHILGQAMERIYGGQLCIGP 171
Query: 266 ESSQYF--------SLVSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKL 317
+S+ F +VS D+ ++ + + IV+EKQPFERL + ++ + MF
Sbjct: 172 ATSEGFYYDMAMGDKIVSAEDYKLINEVAQKIVQEKQPFERLAVPRDIALTMF------- 224
Query: 318 RILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTT 377
K+N +K I+ + T
Sbjct: 225 -----------------------------------------KFNKYKTEIISKIPQEDTV 243
Query: 378 TAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPDNKQLK 423
+ YRCG L+DLCRGPH NSS YW GKA+ + LQRVYGISFPD KQ++
Sbjct: 244 SLYRCGTLVDLCRGPHVPNTSYIKSFAVTKNSSAYWLGKAENDDLQRVYGISFPDKKQME 303
Query: 424 EWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGF 483
E+E EAA RDHR +G+ QELFFFH SPGS FF P G IYN LVEFIR EY +RGF
Sbjct: 304 EYENFMREAALRDHRNVGKAQELFFFHPYSPGSAFFLPHGTRIYNKLVEFIREEYHRRGF 363
Query: 484 QEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRE 543
EV+SP++++ KLW+ SGHW YSENMF V+ + ++LKPMNCPGHCL+F R RS+RE
Sbjct: 364 TEVISPSIFSQKLWEQSGHWQKYSENMFVLPVDKDNFSLKPMNCPGHCLMFGSRQRSYRE 423
Query: 544 LPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSI 603
LPLR ADFGVLHRNEL+GALTGLTRVR+FQQDDAHIFCT E I DEI L F++ VY I
Sbjct: 424 LPLRFADFGVLHRNELAGALTGLTRVRKFQQDDAHIFCTTEMIEDEINSCLGFMQYVYGI 483
Query: 604 FGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITIT 663
FGF F L LSTRP+ +LGE+ W+ AE LE +LN FG+PW NP DGAFYGPKIDI IT
Sbjct: 484 FGFEFGLELSTRPDNFLGEIAQWDIAEASLEKALNKFGKPWKLNPKDGAFYGPKIDIHIT 543
Query: 664 DALKRPHQCATIQLDFQLPIRFNLAYVKNVRAQTHELP 701
D LKR HQCATIQLDFQLPIRF+L Y + A+ + P
Sbjct: 544 DCLKRSHQCATIQLDFQLPIRFDLEYQSDDAAELKKRP 581
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 100/185 (54%), Gaps = 46/185 (24%)
Query: 40 VTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLNK 99
VTLPDGK+V +TTPYD+A GIS+GLADS + +KVNG
Sbjct: 78 VTLPDGKVVAGIKNKTTPYDIAKGISRGLADSIVSSKVNG-------------------- 117
Query: 100 FDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAME 159
+WD+ RPLE +C L+L KFD+EE FWHS+AH+LG+AME
Sbjct: 118 ----------------EQIWDISRPLEADCNLQLC-KFDSEEGKKTFWHSSAHILGQAME 160
Query: 160 RVYGGCLCYGPPIENGFYYDMYL-DGEAQMERITLWDKL------KKQYDEEIAAKVPEE 212
R+YGG LC GP GFYYDM + D E L +++ +KQ E +A VP +
Sbjct: 161 RIYGGQLCIGPATSEGFYYDMAMGDKIVSAEDYKLINEVAQKIVQEKQPFERLA--VPRD 218
Query: 213 IQVTL 217
I +T+
Sbjct: 219 IALTM 223
>sp|Q3UQ84|SYTM_MOUSE Threonine--tRNA ligase, mitochondrial OS=Mus musculus GN=Tars2 PE=2
SV=1
Length = 723
Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/572 (45%), Positives = 339/572 (59%), Gaps = 105/572 (18%)
Query: 189 ERITLWDKLKKQYDEEIAA---KVPEEIQVTLPDGKIVPAKSWRTTPYDVAAGISKGLAD 245
ER L+++L + +++A+ K I+++LP+G+ V A +W TTPY +A IS LAD
Sbjct: 39 ERFGLFEELWTAHVKKLASMTQKKARAIKISLPEGQKVDAVAWNTTPYQLAHQISVTLAD 98
Query: 246 STIIAK------DWTR---------------------------------ANKSRGNELC- 265
+ + A+ D R A + G LC
Sbjct: 99 TAVAAEVNGELYDLDRPLETDCHLRFLTFDSPEGKAVFWHSSAHVLGAAAEQQLGAVLCR 158
Query: 266 ----ESSQYFSL-------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNP 314
ES Y V + + P++E + ++++ QPF RLE ++ L ++FK N
Sbjct: 159 GPSTESGFYHDFFLGKERTVRSAELPILERICQELIAAAQPFRRLEASRDQLRQLFKDNH 218
Query: 315 FKLRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNT 374
FKL +++EKV PT T Y CG +DLCRGPH+RHTG+I A K+
Sbjct: 219 FKLHLIEEKVTGPTATVYGCGMSVDLCRGPHLRHTGQIGALKLLT--------------- 263
Query: 375 PTTTAYRCGPLIDLCRGPHNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAK 434
NSS W E+LQRV GISFP + L+ WE +E A
Sbjct: 264 -------------------NSSALWRSLGAPETLQRVSGISFPKVELLRNWEARREAAEL 304
Query: 435 RDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNV 494
RDHR+IG+EQELFFFHELSPGSCFF P+G +YN LV FIR+EY +RGF EV +P +++
Sbjct: 305 RDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYARRGFSEVKTPTLFST 364
Query: 495 KLWQTSGHWAHYSENMFSF------DVEN-----------ETYALKPMNCPGHCLIFDHR 537
KLW+ SGHW HY +MFS V+N +T ALKPMNCP HCL+F HR
Sbjct: 365 KLWEQSGHWEHYRADMFSLKPPGTDGVDNSQSGHPARCPKDTLALKPMNCPAHCLMFAHR 424
Query: 538 VRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFL 597
RSWRELP+R+ADFG LHR E SG+L GLTR+ RFQQDDAHIFC Q+ EI G LDFL
Sbjct: 425 PRSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFL 484
Query: 598 RNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPK 657
R VYS+ GF+F+L LSTRP +LGE +W++AE+ L+ +L FGEPW NPGDGAFYGPK
Sbjct: 485 RCVYSVLGFSFHLALSTRPPGFLGEPRLWDQAEQVLQQALEKFGEPWDLNPGDGAFYGPK 544
Query: 658 IDITITDALKRPHQCATIQLDFQLPIRFNLAY 689
ID+ + DAL RPHQC TIQLDFQLP+RF+L Y
Sbjct: 545 IDVHLHDALGRPHQCGTIQLDFQLPLRFDLQY 576
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 88/172 (51%), Gaps = 39/172 (22%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
+++LP+G+ V A +W TTPY +A IS LAD+ + A+VN
Sbjct: 67 KISLPEGQKVDAVAWNTTPYQLAHQISVTLADTAVAAEVN-------------------- 106
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
G L+DLDRPLET+C L L FD+ E +VFWHS+AHVLG A
Sbjct: 107 -----------------GELYDLDRPLETDCHLRFLT-FDSPEGKAVFWHSSAHVLGAAA 148
Query: 159 ERVYGGCLCYGPPIENGFYYDMYLDGEAQMERITLWDKLKKQYDEEIAAKVP 210
E+ G LC GP E+GFY+D +L E + L L++ E IAA P
Sbjct: 149 EQQLGAVLCRGPSTESGFYHDFFLGKERTVRSAEL-PILERICQELIAAAQP 199
>sp|Q68FW7|SYTM_RAT Threonine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Tars2
PE=2 SV=1
Length = 723
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/611 (42%), Positives = 330/611 (54%), Gaps = 146/611 (23%)
Query: 189 ERITLWDKLKKQYDEEIAA---KVPEEIQVTLPDGKIVPAKSWRTTPYDVAAGISKGLAD 245
ER L+++L + +A+ K I+++LP+G+ V A +W TTPY +A IS LAD
Sbjct: 39 ERFGLFEELWTAQVKRLASMTQKKARTIKISLPEGQKVDAVAWNTTPYQLAQQISSTLAD 98
Query: 246 STIIAK------DWTR---------------------------------ANKSRGNELC- 265
+ + A+ D R A + G LC
Sbjct: 99 TAVAAEVNGELYDLDRPLETDCHLRFLTFDSPEGKAVFWRSSAHVLGAAAEQHLGAVLCR 158
Query: 266 ----ESSQYFSL-------VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNP 314
ES Y V + + P +E + ++I+ QPF RLE + L ++FK
Sbjct: 159 GPSTESGFYLDFFLGKERTVRSTELPTLERICQEIITAAQPFRRLEASRGQLRQLFKD-- 216
Query: 315 FKLRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNT 374
N FKL +++EKV
Sbjct: 217 ----------------------------------------------NHFKLHVIEEKVTG 230
Query: 375 PTTTAYRCGPLIDLCRGPH--------------NSSTYWEGKADAESLQRVYGISFPDNK 420
T T Y CG +DLC+GPH NSS W E+LQRV GISFP +
Sbjct: 231 TTATVYGCGMSVDLCQGPHLRHTGQIGALKLLTNSSALWRSSEAPETLQRVSGISFPKAE 290
Query: 421 QLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRK 480
L+ WE +EEA RDHR+IG+EQELFFFHELSPGSCFF P+G IYN LV FIR+EY +
Sbjct: 291 LLRNWEARREEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRIYNALVAFIRAEYAR 350
Query: 481 RGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFD-----------------VENETYALK 523
RGF EV +P +++ KLW+ SGHW HY +MFS +T ALK
Sbjct: 351 RGFSEVKTPTLFSTKLWEQSGHWEHYRAHMFSLKPPGTDGVDSSQSGHPARCPKDTLALK 410
Query: 524 PMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTV 583
PMNCP HCL+F HR RSWRELP+R+ADFGVLHR E SG+L GLTR+ RFQQDDAHIFC
Sbjct: 411 PMNCPAHCLMFAHRPRSWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIFCAP 470
Query: 584 EQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEP 643
Q+ EI G LDFLR+VYS+ GF+F+L LSTRP +LGE +W++AEK L+ +L FGEP
Sbjct: 471 SQLEAEIRGCLDFLRSVYSVLGFSFHLALSTRPPGFLGEPHLWDQAEKVLQQALEEFGEP 530
Query: 644 WTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYVKNVRAQTHELPRT 703
W NPGDGAFYGPKID+ + DAL RPHQC TIQLDFQLP+RF+L Y A
Sbjct: 531 WNLNPGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGA-------- 582
Query: 704 LSDIRPSCPIL 714
P CP+L
Sbjct: 583 -----PECPVL 588
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 87/172 (50%), Gaps = 39/172 (22%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
+++LP+G+ V A +W TTPY +A IS LAD+ + A+VN
Sbjct: 67 KISLPEGQKVDAVAWNTTPYQLAQQISSTLADTAVAAEVN-------------------- 106
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
G L+DLDRPLET+C L L FD+ E +VFW S+AHVLG A
Sbjct: 107 -----------------GELYDLDRPLETDCHLRFLT-FDSPEGKAVFWRSSAHVLGAAA 148
Query: 159 ERVYGGCLCYGPPIENGFYYDMYLDGEAQMERITLWDKLKKQYDEEIAAKVP 210
E+ G LC GP E+GFY D +L G+ + R T L++ E I A P
Sbjct: 149 EQHLGAVLCRGPSTESGFYLDFFL-GKERTVRSTELPTLERICQEIITAAQP 199
>sp|Q9BW92|SYTM_HUMAN Threonine--tRNA ligase, mitochondrial OS=Homo sapiens GN=TARS2 PE=1
SV=1
Length = 718
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/586 (42%), Positives = 326/586 (55%), Gaps = 133/586 (22%)
Query: 189 ERITLWDKL---KKQYDEEIAAKVPEEIQVTLPDGKIVPAKSWRTTPYDVAAGISKGLAD 245
ER+ L+++L + + +A K P I+++LP G+ + A +W TTPY +A IS LAD
Sbjct: 34 ERLGLFEELWAAQVKRLASMAQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQISSTLAD 93
Query: 246 STIIAK------DWTR---------------------------------ANKSRGNELCE 266
+ + A+ D R A + G LC
Sbjct: 94 TAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFWHSSTHVLGAAAEQFLGAVLCR 153
Query: 267 --SSQY-----FSL-----VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNP 314
S++Y F L + + PV+E + +++ +PF RLE ++ L ++FK
Sbjct: 154 GPSTEYGFYHDFFLGKERTIRGSELPVLERICQELTAAARPFRRLEASRDQLRQLFKD-- 211
Query: 315 FKLRILKEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNT 374
NPFKL +++EKV
Sbjct: 212 ----------------------------------------------NPFKLHLIEEKVTG 225
Query: 375 PTTTAYRCGPLIDLCRGPHNSSTYWEG--------------KADAESLQRVYGISFPDNK 420
PT T Y CG L+DLC+GPH T G E+LQRV GISFP +
Sbjct: 226 PTATVYGCGTLVDLCQGPHLRHTGQIGGLKLLSNSSSLWRSSGAPETLQRVSGISFPTTE 285
Query: 421 QLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRK 480
L+ WE +EEA RDHR+IG+EQELFFFHELSPGSCFF P+G +YN LV FIR+EY
Sbjct: 286 LLRVWEAWREEAELRDHRRIGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYAH 345
Query: 481 RGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVEN-----------------ETYALK 523
RGF EV +P +++ KLW+ SGHW HY E+MF+ +T ALK
Sbjct: 346 RGFSEVKTPTLFSTKLWEQSGHWEHYQEDMFAVQPPGSDRPPSSQSDDSTRHITDTLALK 405
Query: 524 PMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTV 583
PMNCP HCL+F HR RSWRELPLR+ADFG LHR E SG L GLTR+R FQQDDAHIFCT
Sbjct: 406 PMNCPAHCLMFAHRPRSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTT 465
Query: 584 EQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEP 643
+Q+ EI LDFLR+VY++ GF+F L LSTRP +LG+ +W++AE+ L+ +L FGEP
Sbjct: 466 DQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEP 525
Query: 644 WTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAY 689
W N GDGAFYGPKID+ + DAL RPHQC TIQLDFQLP+RF+L Y
Sbjct: 526 WDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQY 571
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 74/147 (50%), Gaps = 38/147 (25%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
+++LP G+ + A +W TTPY +A IS LAD+ + A+VNG P
Sbjct: 62 KISLPGGQKIDAVAWNTTPYQLARQISSTLADTAVAAQVNG------EP----------- 104
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
+DL+RPLET+ L L FD+ E +VFWHS+ HVLG A
Sbjct: 105 --------------------YDLERPLETDSDLRFLT-FDSPEGKAVFWHSSTHVLGAAA 143
Query: 159 ERVYGGCLCYGPPIENGFYYDMYLDGE 185
E+ G LC GP E GFY+D +L E
Sbjct: 144 EQFLGAVLCRGPSTEYGFYHDFFLGKE 170
>sp|Q8SRH2|SYTC_ENCCU Probable threonine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU07_1570 PE=3 SV=1
Length = 640
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/416 (52%), Positives = 281/416 (67%), Gaps = 37/416 (8%)
Query: 274 VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKLRILKEKVNTPTTTAYR 333
+S+ D+ +E M I+K+ FER+ KE+L+E ++ NP K + + V+ ++ YR
Sbjct: 114 ISSEDYEKIEEEMVKIMKKNYRFERVIKSKEELLEAYRDNPCKTHFIMKGVDK-ESSVYR 172
Query: 334 CGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPH 393
G D+C GPH+R TG IKA KV K
Sbjct: 173 NGDFFDMCLGPHIRSTGVIKAVKVLK---------------------------------- 198
Query: 394 NSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELS 453
NSS Y+ + +SLQR+Y I+FP + E+ K +EEA +RDHRKIG E +LFFF + S
Sbjct: 199 NSSAYFLNDPNLKSLQRIYAITFPSKGMMDEYLKRKEEAKERDHRKIGTELDLFFFSKYS 258
Query: 454 PGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSF 513
PGSCFF P G +YNTL+EF+R EYRKRGF+EV++PN++ +LW+ SGH +Y ENMF
Sbjct: 259 PGSCFFLPNGTTMYNTLIEFLREEYRKRGFKEVITPNIFCTQLWEESGHLQNYKENMFI- 317
Query: 514 DVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQ 573
+E +T+ALKPMNCPGHC++F H+ S+R+LPLR+ADFGVLHRNELSG LTGLTRVRRFQ
Sbjct: 318 -IEGDTFALKPMNCPGHCVMFRHQDHSFRDLPLRLADFGVLHRNELSGTLTGLTRVRRFQ 376
Query: 574 QDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQL 633
QDDAHIFCT +Q+ +EI G L+FL VY +FGF F L LSTRPEKYLG ++ W++AEK L
Sbjct: 377 QDDAHIFCTKDQVKEEIKGCLEFLSFVYGVFGFRFELVLSTRPEKYLGSVDEWDRAEKAL 436
Query: 634 EASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAY 689
+++ P+ N GDGAFYGPKIDIT+ DAL R QCATIQLDFQLP RF L Y
Sbjct: 437 ADAMDESNMPFKINAGDGAFYGPKIDITLHDALGRRIQCATIQLDFQLPQRFELKY 492
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 17/111 (15%)
Query: 114 VNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVY-GGCLCYGPPI 172
++GV D+ + +CKLEL+ F+++ A +FWHS+AHVLG A+ +Y L +GPPI
Sbjct: 42 IDGVYSDMSSEILKDCKLELMT-FEDDGARDIFWHSSAHVLGNALVNLYPDAKLVHGPPI 100
Query: 173 ENGFYYDM----------YLDGEAQMERITLWDKLKKQYDEEIAAKVPEEI 213
E GF+YD+ Y E +M +I +KK Y E K EE+
Sbjct: 101 EEGFFYDVDVTDPISSEDYEKIEEEMVKI-----MKKNYRFERVIKSKEEL 146
>sp|Q8MP20|SYTC2_DICDI Probable threonine--tRNA ligase 2, cytoplasmic OS=Dictyostelium
discoideum GN=thrS2 PE=3 SV=1
Length = 698
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/297 (64%), Positives = 232/297 (78%), Gaps = 2/297 (0%)
Query: 394 NSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELS 453
NSS K +E LQR+ GISFP Q+ W ++Q+ AA RDHR IG++QELFFFH S
Sbjct: 241 NSSVVGPNKEYSE-LQRIVGISFPSKDQMNNWVEIQKIAALRDHRVIGKDQELFFFHPFS 299
Query: 454 PGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSF 513
PGSCFF P G IYN L++F+R EYRKRG+QEV+SPN+YN KLW+TSGHW +Y +NMFSF
Sbjct: 300 PGSCFFLPHGTKIYNKLLQFLRLEYRKRGYQEVISPNIYNQKLWETSGHWDNYKDNMFSF 359
Query: 514 DVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQ 573
+ ++ Y+LKPMNCPGHCL++ HR RS++ELP+R+ADFGVLHRNE G+L+GLTRVRRFQ
Sbjct: 360 ECDHTQYSLKPMNCPGHCLMYAHRARSYKELPMRIADFGVLHRNETHGSLSGLTRVRRFQ 419
Query: 574 QDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQL 633
QDDAHIFCT + I +EI LDF++ VY+IF FTF+L LSTRP+ YLGEL VW KAE L
Sbjct: 420 QDDAHIFCTPDMIREEIKQCLDFMKYVYTIFNFTFHLELSTRPDSYLGELSVWEKAETSL 479
Query: 634 EASLNSF-GEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAY 689
L F G+ WT N GDGAFYGPKIDI + DA + HQCATIQLDFQLPIRFNL Y
Sbjct: 480 SQVLTEFCGDKWTINHGDGAFYGPKIDIHLKDANGKNHQCATIQLDFQLPIRFNLEY 536
>sp|B7XIA1|SYTC_ENTBH Probable threonine--tRNA ligase, cytoplasmic OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_22768 PE=3 SV=1
Length = 634
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/414 (49%), Positives = 272/414 (65%), Gaps = 41/414 (9%)
Query: 278 DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKLRILKEKVNTPTT--TAYRCG 335
DF +E M+ I+ + F + +KK+DL++M+K N +K+ + N P + Y
Sbjct: 115 DFADIEKEMQRIINKNIDFRKKMIKKDDLLKMYKDNDYKVHFIN---NIPDNLISVYYND 171
Query: 336 PLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNS 395
D+C+GPH++ TG +KAFK+ K +S
Sbjct: 172 EFYDMCQGPHIQSTGLVKAFKILK----------------------------------SS 197
Query: 396 STYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPG 455
S Y+ AD + LQR+YGISFP+ LKE+E+ ++A + DHRKIG+E L+FFHE SPG
Sbjct: 198 SCYFLNSADNQILQRIYGISFPNKTLLKEYEEKVQKAKEMDHRKIGKELNLYFFHEYSPG 257
Query: 456 SCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDV 515
SCF+ P G IYN L+EF+R EY KRGF+EV++PN++++ LW+ SGH+ +Y EN++ +
Sbjct: 258 SCFWLPDGVVIYNRLMEFLRKEYIKRGFKEVITPNIFHIDLWKESGHYQNYKENIYG--I 315
Query: 516 ENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQD 575
E +ALKPMNCPGHC+IF RS++ELPLR ADFGVLHRNE SG+LTGLTRVRRFQQD
Sbjct: 316 SGEDFALKPMNCPGHCIIFKSVERSYKELPLRYADFGVLHRNECSGSLTGLTRVRRFQQD 375
Query: 576 DAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEA 635
DAHIF + I +EI A+ FL+ VYSIF F + L LSTRP K+LG +E W+ AEK L+
Sbjct: 376 DAHIFTSKSSIKEEIENAIGFLKTVYSIFNFKYELFLSTRPTKFLGTIEEWDVAEKSLKD 435
Query: 636 SLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAY 689
++ G +T N GDGAFYGPKIDI + D L R QCATIQLDFQLP RF+L +
Sbjct: 436 AIIDSGHTYTLNEGDGAFYGPKIDIILHDILNRKIQCATIQLDFQLPQRFDLKF 489
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
Query: 114 VNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGCLCYGPPIE 173
++G++ D++ + N K+EL + FD++E V+WHS+AH+LG A+ +Y L GP ++
Sbjct: 40 IDGIMADINTEINENQKIELYD-FDSKEGQHVYWHSSAHILGNALVNLYQCKLVNGPALD 98
Query: 174 NGFYYDM----------YLDGEAQMERI 191
GFYYD+ + D E +M+RI
Sbjct: 99 EGFYYDIDIERPIREEDFADIEKEMQRI 126
>sp|A9A078|SYT_DESOH Threonine--tRNA ligase OS=Desulfococcus oleovorans (strain DSM 6200
/ Hxd3) GN=thrS PE=3 SV=1
Length = 637
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/417 (44%), Positives = 251/417 (60%), Gaps = 35/417 (8%)
Query: 274 VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKLRILKEKVNTPTTTAYR 333
VS F +E +K IV K PF R E+ K + ++ ++ P+K IL E + T + Y
Sbjct: 111 VSEEIFSRVEAEIKKIVSAKIPFVRKEVDKAEALDRYRDQPYKTEILNE-IEDDTVSLYT 169
Query: 334 CGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPH 393
G DLCRGPHV HTG ++A K+TK
Sbjct: 170 NGDFTDLCRGPHVPHTGFVRAVKLTKI--------------------------------- 196
Query: 394 NSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELS 453
S YW G + E LQR+YG +F K+L + L EEA KRDHRK+G E +LF FHE +
Sbjct: 197 -SGAYWRGDQNREQLQRLYGTAFFSKKELDAYLTLIEEAKKRDHRKLGAELDLFSFHEEA 255
Query: 454 PGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSF 513
G FF P G ++N L+++ R E+R G+ EV +P + + LW+ SGHW +Y ENM+
Sbjct: 256 AGMPFFHPNGMKLWNALLDYWRLEHRAAGYVEVKTPVMLDRALWEKSGHWENYRENMYVS 315
Query: 514 DVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQ 573
+++ YA+KPMNCPG L++ + S+R+LPLR+A+ G++HR+ELSG L+GL RVR F
Sbjct: 316 VIDDNQYAIKPMNCPGGMLLYKEKRYSYRDLPLRVAEIGLVHRHELSGVLSGLFRVRAFH 375
Query: 574 QDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQL 633
QDDAHIF T +QI EI G L + +YS FG F+L LSTRP K +G E W KA L
Sbjct: 376 QDDAHIFMTPDQIEQEIFGVLKLVETIYSTFGLGFHLELSTRPAKSIGTDEQWVKATAGL 435
Query: 634 EASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
A+L+++G+ + N GDGAFYGPKID+ I DAL R QC TIQLD LP RF+L+Y+
Sbjct: 436 RAALDAYGKGYAVNEGDGAFYGPKIDVHIKDALGRTWQCGTIQLDMSLPERFDLSYI 492
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 114 VNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGPPI 172
V+G DL P+ T+ + L+ D E + HS AHV+ EA++RV+ L GP +
Sbjct: 40 VDGAAMDLSEPIATDAAVRLITTRD-PEGLHIMRHSAAHVMAEAVQRVFPDAELTIGPVV 98
Query: 173 ENGFYYDMYLDGEAQMERITLWDKLKKQYDEEIAAKVP 210
E+GFYYD +D E E I + +++ + + ++AK+P
Sbjct: 99 EDGFYYD--IDMEPVSEEI--FSRVEAEIKKIVSAKIP 132
>sp|P18256|SYT2_BACSU Threonine--tRNA ligase 2 OS=Bacillus subtilis (strain 168) GN=thrZ
PE=2 SV=2
Length = 638
Score = 364 bits (935), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/422 (44%), Positives = 250/422 (59%), Gaps = 36/422 (8%)
Query: 274 VSTLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMF--KYNPFKLRILKEKVNTPTTTA 331
+++ D +E MK+I+ E +R+E+ E+ E+F K KL ILK+ T
Sbjct: 115 LASGDLEAIEKEMKNIINENLEIKRIEVSYEEAEELFAQKDERLKLEILKDIPRGEDITL 174
Query: 332 YRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRG 391
Y+ G +DLCRGPH+ TG IKAFK+T+
Sbjct: 175 YQQGEFVDLCRGPHLPSTGMIKAFKLTRV------------------------------- 203
Query: 392 PHNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHE 451
S YW G + E LQRVYG++F K L + EEAAKRDHRK+G++ LF F E
Sbjct: 204 ---SGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHLHMLEEAAKRDHRKLGKQLGLFMFSE 260
Query: 452 LSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMF 511
+PG F+ PKG + N L F R G+ EV +P + N +LW+ SGHW HY +NM+
Sbjct: 261 EAPGMPFYLPKGQIVRNELERFSRELQTNAGYDEVRTPFMMNQRLWEQSGHWDHYRDNMY 320
Query: 512 SFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRR 571
+V++ +A+KPMNCPGH LIF + + S+R+LP+RMA+FG +HR+E SGAL G+ RVR
Sbjct: 321 FSEVDDTRFAMKPMNCPGHMLIFKNSLYSYRDLPIRMAEFGQVHRHEYSGALNGMLRVRT 380
Query: 572 FQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEK 631
F QDDAHIF +QI EI A+ + VY FGF +++ LSTRPE LG+ +W +E+
Sbjct: 381 FCQDDAHIFVREDQIESEIKEAIRLIDEVYRTFGFEYSVELSTRPEDSLGDDSLWEASER 440
Query: 632 QLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYVK 691
L L G + N GDGAFYGPKID I DALKR HQCATIQLDFQ+P +F+L Y+
Sbjct: 441 ALARVLEELGLSYEINEGDGAFYGPKIDFHIKDALKRSHQCATIQLDFQMPEKFDLTYIN 500
Query: 692 NV 693
+
Sbjct: 501 EL 502
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 114 VNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGPPI 172
VNG L DL LE + +L ++ D++E V H+TAHVL +A++R+YG L GP I
Sbjct: 43 VNGKLVDLSFKLEEDAELSIVT-LDSQEGLQVLRHTTAHVLAQAVKRLYGEVSLGVGPVI 101
Query: 173 ENGFYYDMYL 182
+GFYYDM L
Sbjct: 102 LDGFYYDMKL 111
>sp|Q3ABS6|SYT_CARHZ Threonine--tRNA ligase OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=thrS PE=3 SV=1
Length = 634
Score = 358 bits (919), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 177/415 (42%), Positives = 246/415 (59%), Gaps = 36/415 (8%)
Query: 278 DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMF--KYNPFKLRILKEKVNTPTTTAYRCG 335
D +E M+ IVKE P ER + +++ I+ F K +K+ ++K+ + YR G
Sbjct: 116 DLEKIEAEMEKIVKEDLPIERFVLSRDEAIKFFEEKGEIYKVELVKDIPEGVEISFYRQG 175
Query: 336 PLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNS 395
+DLC GPHV TG +KAFK+ +
Sbjct: 176 EFVDLCTGPHVPSTGYLKAFKLLNI----------------------------------A 201
Query: 396 STYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPG 455
YW G + LQR+YG+SFP L ++ EEA KRDHRKIG+E +LF E PG
Sbjct: 202 GAYWRGNEKNKMLQRIYGVSFPKKSMLTDYLNFLEEAKKRDHRKIGQELDLFSLQEEGPG 261
Query: 456 SCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDV 515
FF PKG I N L F R ++R G+QE+ +P + N +LW+ SGHWAHY ENM+ +
Sbjct: 262 FPFFHPKGMVIRNELENFWREKHRLAGYQEIKTPIILNRELWERSGHWAHYKENMYFTKI 321
Query: 516 ENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQD 575
+++ YA+KPMNCPG L++ +++ S+RE P+R+A+ G++HR+ELSG L GL RVR F QD
Sbjct: 322 DDQDYAIKPMNCPGSILVYKNKLHSYREFPIRLAELGLVHRHELSGVLHGLMRVRCFTQD 381
Query: 576 DAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEA 635
DAHIF EQ+ DEI+G ++ + Y +FGF +++ LSTRPE +G E+W A L+
Sbjct: 382 DAHIFMLPEQVKDEIIGVINLIDEFYRLFGFEYHVELSTRPENSMGSDELWELATNSLKE 441
Query: 636 SLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
+L G P+ N GDGAFYGPKID + D L R QC TIQLDFQ+P +F+L Y+
Sbjct: 442 ALEERGLPYKINEGDGAFYGPKIDFHLKDCLGRTWQCGTIQLDFQMPEKFDLTYI 496
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 40/182 (21%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A +NG L DL + + + + L F+++E VF HS+AH++ +A++R++ L GP
Sbjct: 38 ASINGKLIDLSQKISESGEFRLYT-FEDDEGKDVFRHSSAHLMAQAVKRLFPKTKLAIGP 96
Query: 171 PIENGFYYDMYLDG----------EAQMERIT------------------LWDKLKKQYD 202
I++GFYYD + EA+ME+I +++ + Y
Sbjct: 97 AIKDGFYYDFDPEESFSPEDLEKIEAEMEKIVKEDLPIERFVLSRDEAIKFFEEKGEIYK 156
Query: 203 EEIAAKVPEEIQVTL-PDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKDWTRANKSRG 261
E+ +PE ++++ G+ V T P+ + G K I W RG
Sbjct: 157 VELVKDIPEGVEISFYRQGEFV---DLCTGPHVPSTGYLKAFKLLNIAGAYW------RG 207
Query: 262 NE 263
NE
Sbjct: 208 NE 209
>sp|Q8R9A4|SYT_THETN Threonine--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=thrS PE=3
SV=1
Length = 644
Score = 358 bits (919), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 179/418 (42%), Positives = 248/418 (59%), Gaps = 36/418 (8%)
Query: 275 STLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYN--PFKLRILKEKVNTPTTTAY 332
+T DF +E M I+KE ER + KE+ I+ K P+K+ +++E + Y
Sbjct: 122 TTEDFEAIEEEMNKIIKEDYKLERFVLSKEEAIKFMKEKDEPYKVELIEEIPEGEEISFY 181
Query: 333 RCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGP 392
+ G +DLC GPH+ TG +KA K+
Sbjct: 182 KQGEFVDLCAGPHLPSTGMVKAIKLLSV-------------------------------- 209
Query: 393 HNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHEL 452
+ YW+G + LQR+YGISFP L E+ + EEA KRDHRK+G+E +LF H
Sbjct: 210 --AGAYWKGDEKNKMLQRIYGISFPKKSMLDEYLHMMEEAKKRDHRKLGKELDLFSIHPE 267
Query: 453 SPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFS 512
PG FF PKG I N L +F R E+ KRG+QE+ +P + N +LW+ SGHW HY ENM+
Sbjct: 268 GPGFPFFHPKGMIIRNILEDFWRKEHIKRGYQEIRTPIILNEELWKRSGHWDHYKENMYF 327
Query: 513 FDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRF 572
+++ +TYA+KPMNCPG L++ +RS+R+LPLR+ + G++HR+ELSG L GL RVR F
Sbjct: 328 TEIDGQTYAIKPMNCPGAMLVYKSTLRSYRDLPLRLCELGLVHRHELSGVLHGLMRVRSF 387
Query: 573 QQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQ 632
QDDAH+F T EQ+ DEI+G ++ + Y IFGF +++ LSTRPE +G E W A
Sbjct: 388 TQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYHVELSTRPENSMGTDEEWELATNA 447
Query: 633 LEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
L ++L P+ N G+GAFYGPKID + D++ R QC TIQLDFQ+P RF L Y+
Sbjct: 448 LISALKRANLPYKVNEGEGAFYGPKIDFHLKDSIGRTWQCGTIQLDFQMPERFELEYI 505
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 115 NGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGPPIE 173
NG + +L+ +E + +LE+L F++EE ++WH+++H+L +A++R++ L GP I+
Sbjct: 50 NGKIVELNTKIEEDGELEILT-FEDEEGKKIYWHTSSHILAQAVKRLFKDVKLAIGPAID 108
Query: 174 NGFYYD 179
NGFYYD
Sbjct: 109 NGFYYD 114
>sp|Q8RFS6|SYT_FUSNN Threonine--tRNA ligase OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=thrS PE=3 SV=1
Length = 620
Score = 355 bits (912), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 177/417 (42%), Positives = 252/417 (60%), Gaps = 38/417 (9%)
Query: 278 DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFK---YNPFKLRILKEKVNTPTTTAYRC 334
D +E MK IVKE E+ + +++ IE F+ N +K+ +++ + Y+
Sbjct: 97 DLEKIEAEMKRIVKENIKLEKYVLPRDEAIEYFRDVDKNKYKVEVVEGIPQGEQVSFYKQ 156
Query: 335 GPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHN 394
G DLCRG HV TG +KA FKLR +
Sbjct: 157 GDFTDLCRGTHVPSTGYLKA--------FKLRTV-------------------------- 182
Query: 395 SSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSP 454
+ YW G + + LQR+YG SF + ++LK KL EEA KRDHRK+G+E ELFF E P
Sbjct: 183 AGAYWRGNSKNKMLQRIYGYSFSNEERLKHHLKLMEEAEKRDHRKLGKELELFFLSEYGP 242
Query: 455 GSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFD 514
G FF PKG + N L++ R E+ K G+Q++ +P + N +LW+ SGHW +Y ENM++ +
Sbjct: 243 GFPFFLPKGMIVRNVLIDLWRREHEKAGYQQLETPIMLNKELWEISGHWFNYRENMYTSE 302
Query: 515 VENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQ 574
++ +A+KPMNCPG L F H++ S+++LP R+A+ G +HR+E SGAL GL RVR F Q
Sbjct: 303 IDELEFAIKPMNCPGGVLAFKHQLHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQ 362
Query: 575 DDAHIFCTVEQIGDEIVGALDFLRNVYS-IFGFTFNLRLSTRPEKYLGELEVWNKAEKQL 633
DD+HIF T +Q+ DEI+G ++ + YS +FGF + + LST+PEK +G E+W+ AE L
Sbjct: 363 DDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIELSTKPEKAIGSQEIWDMAEAAL 422
Query: 634 EASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
+L+ G + NPGDGAFYGPK+D I DA+ R QC TIQLDF LP RF++ Y+
Sbjct: 423 AGALDKLGRKYKINPGDGAFYGPKLDFKIKDAIGRMWQCGTIQLDFNLPERFDVTYI 479
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 39/124 (31%)
Query: 58 YDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWLAFVNGV 117
+++A GIS LA ++ AKV+G D+ L+ + ++E +
Sbjct: 2 FEIAKGISNSLAKKSVGAKVDGKNVDMSYILDHDAEVEFI-------------------- 41
Query: 118 LWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGPPIENGF 176
D+D P E + HSTAH++ +A+ R+Y + GP IENGF
Sbjct: 42 --DIDSP----------------EGEDIVRHSTAHLMAQAVLRLYPDTKVTIGPVIENGF 83
Query: 177 YYDM 180
YYD
Sbjct: 84 YYDF 87
>sp|B1IMV3|SYT_CLOBK Threonine--tRNA ligase OS=Clostridium botulinum (strain Okra / Type
B1) GN=thrS PE=3 SV=1
Length = 635
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 173/411 (42%), Positives = 247/411 (60%), Gaps = 36/411 (8%)
Query: 282 MEGLMKDIVKEKQPFERLEMKKEDLIEMFKYN--PFKLRILKEKVNTPTTTAYRCGPLID 339
+E +K I+KE ER E+ +E+ I + K N +K+ ++++ + Y+ G D
Sbjct: 120 IEAEIKKIIKENHKLERFELPREEAINLMKENNEDYKVELIEDLPEGEVISFYKQGDFTD 179
Query: 340 LCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSSTYW 399
LC GPHV TGK+K+ K L+ L + YW
Sbjct: 180 LCAGPHVPSTGKVKSVK----------------------------LLSL------AGAYW 205
Query: 400 EGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFF 459
G + + LQR+YG +F +L E+ + EEA KRDHRK+G+E +LF HE PG FF
Sbjct: 206 RGNENNKMLQRIYGTAFTKKSELDEYLNMLEEAKKRDHRKLGKELDLFSIHEEGPGFPFF 265
Query: 460 QPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENET 519
PKG + N L F R E+ K G+QE+ +P + N LW SGHW HY ENM+ ++++
Sbjct: 266 HPKGMIVRNILESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDGD 325
Query: 520 YALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHI 579
YA+KPMNCPG L++ + + S+R+LPLR+++ G++HR+ELSGAL GL RVR F QDDAH+
Sbjct: 326 YAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHL 385
Query: 580 FCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNS 639
+ T EQI +E+VG + + Y +FGF + + LSTRPE +G E W A L+ +L+S
Sbjct: 386 YMTKEQIKEEVVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLKEALDS 445
Query: 640 FGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
G+ + N GDGAFYGPKID + D + R QC TIQLDFQ+P RF+L+Y+
Sbjct: 446 IGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYI 496
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A ++G DL L + LE+L F++E H+ AH+L +A++R+Y L GP
Sbjct: 38 AKIDGETMDLMTELHKDSSLEILT-FEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGP 96
Query: 171 PIENGFYYDMYLD 183
I+ GFYYD D
Sbjct: 97 AIDTGFYYDFEAD 109
>sp|B9KAN7|SYT_THENN Threonine--tRNA ligase OS=Thermotoga neapolitana (strain ATCC 49049
/ DSM 4359 / NS-E) GN=thrS PE=3 SV=1
Length = 640
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/428 (42%), Positives = 245/428 (57%), Gaps = 64/428 (14%)
Query: 278 DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKLRILKEKVNTPTTTAYRCGPL 337
D P +E MK I+KE P ER E+ K++ E+F
Sbjct: 117 DLPRIEQEMKKIIKENLPIEREEISKDEAKEIF--------------------------- 149
Query: 338 IDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSST 397
K P+KL +++E + T T YR G +DLCRGPH ST
Sbjct: 150 ---------------------KDQPYKLELIEE-IEGDTVTIYRQGEFVDLCRGPHLPST 187
Query: 398 --------------YWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGRE 443
YW G L RVYG +F + L+ + K EEA KRDHRK+G +
Sbjct: 188 GVVKHFKLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLENYLKFLEEAQKRDHRKLGPQ 247
Query: 444 QELFFFH-ELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGH 502
ELF + + +PG FF P+G + N L+ F R +R+RG+QE+ +P + N +LW+ SGH
Sbjct: 248 LELFMLNTDYAPGMPFFLPRGVIVLNELMNFSRELHRERGYQEIFTPLIMNEQLWRISGH 307
Query: 503 WAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGA 562
W HY+ENM+ + E YA+KPMNCPGH L++ R S+R+LPLR +FG +HR E SG
Sbjct: 308 WDHYAENMYFIEKGEERYAVKPMNCPGHILVYKSRAVSYRDLPLRFFEFGRVHRYERSGV 367
Query: 563 LTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGE 622
L GL RVR F QDDAHIFCT +QI DEI+G L+ + +YS FGFT+ + LST PE ++G+
Sbjct: 368 LHGLMRVRSFTQDDAHIFCTPDQIEDEILGVLELINTIYSQFGFTYRVELSTMPEDHMGD 427
Query: 623 LEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLP 682
+W KA L+ +L+ G P+ N G+GAFYGPKID I D+L R QCATIQLDF +P
Sbjct: 428 EAIWEKATNALKKALDRAGLPYRVNEGEGAFYGPKIDFHIKDSLGREWQCATIQLDFMMP 487
Query: 683 IRFNLAYV 690
+FN+ Y+
Sbjct: 488 EKFNVTYI 495
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGG---CLCY 168
A V+ LWDL RPLE +C++ + ++ EA + H+ AH+L +A+ R+YG L
Sbjct: 36 AVVDEELWDLKRPLERDCRIRFVT-LEDPEAPEFYRHTMAHILAQAVMRLYGKENVKLGI 94
Query: 169 GPPIENGFYYD 179
GP IENGFYYD
Sbjct: 95 GPTIENGFYYD 105
>sp|B1L0T7|SYT_CLOBM Threonine--tRNA ligase OS=Clostridium botulinum (strain Loch Maree
/ Type A3) GN=thrS PE=3 SV=1
Length = 635
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 244/411 (59%), Gaps = 36/411 (8%)
Query: 282 MEGLMKDIVKEKQPFERLEMKKEDLIEMFKYN--PFKLRILKEKVNTPTTTAYRCGPLID 339
+E +K I+KE ER E+ +E+ I++ K +K+ ++++ + Y+ G D
Sbjct: 120 IEAEIKKIIKENHKLERFELPREEAIDLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTD 179
Query: 340 LCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSSTYW 399
LC GPHV TGK+K+ K+ + YW
Sbjct: 180 LCAGPHVPSTGKVKSVKLLSL----------------------------------AGAYW 205
Query: 400 EGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFF 459
G + + LQR+YG +F +L E+ + EEA KRDHRK+G+E +LF HE PG FF
Sbjct: 206 RGDENNKMLQRIYGTAFTKKSELDEYLNMLEEAKKRDHRKLGKELDLFSIHEEGPGFPFF 265
Query: 460 QPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENET 519
PKG I N L F R E+ K G+QE+ +P + N LW SGHW HY ENM+ ++++
Sbjct: 266 HPKGMIIRNILESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDGD 325
Query: 520 YALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHI 579
YA+KPMNCPG L++ + + S+R+LPLR+++ G++HR+ELSGAL GL RVR F QDDAH+
Sbjct: 326 YAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHL 385
Query: 580 FCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNS 639
+ T EQI +EIVG + + Y +FGF + + LSTRPE +G E W A L +L+S
Sbjct: 386 YMTKEQIKEEIVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDS 445
Query: 640 FGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
G+ + N GDGAFYGPKID + D + R QC TIQLDFQ+P RF+L+Y+
Sbjct: 446 IGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYI 496
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A ++G DL L + LE+L F++E H+ AH+L +A++R+Y L GP
Sbjct: 38 AKIDGETVDLMTELHKDSSLEILT-FEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGP 96
Query: 171 PIENGFYYDMYLD 183
I+ GFYYD D
Sbjct: 97 AIDTGFYYDFEAD 109
>sp|A5I6L8|SYT_CLOBH Threonine--tRNA ligase OS=Clostridium botulinum (strain Hall / ATCC
3502 / NCTC 13319 / Type A) GN=thrS PE=3 SV=1
Length = 635
Score = 352 bits (904), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 247/411 (60%), Gaps = 36/411 (8%)
Query: 282 MEGLMKDIVKEKQPFERLEMKKEDLIEMFKYN--PFKLRILKEKVNTPTTTAYRCGPLID 339
+E +K I+KE ER E+ +E+ I++ K +K+ ++++ + Y+ G D
Sbjct: 120 IEAEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTD 179
Query: 340 LCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSSTYW 399
LC GPHV TGK+K+ K L+ L + YW
Sbjct: 180 LCAGPHVPSTGKVKSVK----------------------------LLSL------AGAYW 205
Query: 400 EGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFF 459
G + + LQR+YG +F +L E+ + EEA KRDHRK+G+E +LF HE PG FF
Sbjct: 206 RGDENNKMLQRIYGTAFTKKSELDEYLNMIEEAKKRDHRKLGKELDLFSIHEEGPGFPFF 265
Query: 460 QPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENET 519
PKG + N L F R E+ K G+QE+ +P + N LW SGHW HY ENM+ +++++
Sbjct: 266 HPKGMIVRNILESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDDD 325
Query: 520 YALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHI 579
YA+KPMNCPG L++ + + S+R+LPLR+++ G++HR+ELSGAL GL RVR F QDDAH+
Sbjct: 326 YAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHL 385
Query: 580 FCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNS 639
+ T EQI +E+VG + + Y +FGF + + LSTRPE +G E W A L +L+S
Sbjct: 386 YMTKEQIKEEVVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDS 445
Query: 640 FGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
G+ + N GDGAFYGPKID + D + R QC TIQLDFQ+P RF+L+Y+
Sbjct: 446 IGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYI 496
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A ++G DL L + LE+L F++E H+ +H+L +A++R+Y L GP
Sbjct: 38 AKIDGETVDLMTELHKDSSLEILT-FEDEMGKWALRHTGSHMLAQAVKRLYPEVKLAIGP 96
Query: 171 PIENGFYYDMYLD 183
I+ GFYYD D
Sbjct: 97 AIDTGFYYDFEAD 109
>sp|A7FY87|SYT_CLOB1 Threonine--tRNA ligase OS=Clostridium botulinum (strain ATCC 19397
/ Type A) GN=thrS PE=3 SV=1
Length = 635
Score = 352 bits (904), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 247/411 (60%), Gaps = 36/411 (8%)
Query: 282 MEGLMKDIVKEKQPFERLEMKKEDLIEMFKYN--PFKLRILKEKVNTPTTTAYRCGPLID 339
+E +K I+KE ER E+ +E+ I++ K +K+ ++++ + Y+ G D
Sbjct: 120 IEAEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTD 179
Query: 340 LCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSSTYW 399
LC GPHV TGK+K+ K L+ L + YW
Sbjct: 180 LCAGPHVPSTGKVKSVK----------------------------LLSL------AGAYW 205
Query: 400 EGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFF 459
G + + LQR+YG +F +L E+ + EEA KRDHRK+G+E +LF HE PG FF
Sbjct: 206 RGDENNKMLQRIYGTAFTKKSELDEYLNMIEEAKKRDHRKLGKELDLFSIHEEGPGFPFF 265
Query: 460 QPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENET 519
PKG + N L F R E+ K G+QE+ +P + N LW SGHW HY ENM+ +++++
Sbjct: 266 HPKGMIVRNILESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDDD 325
Query: 520 YALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHI 579
YA+KPMNCPG L++ + + S+R+LPLR+++ G++HR+ELSGAL GL RVR F QDDAH+
Sbjct: 326 YAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHL 385
Query: 580 FCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNS 639
+ T EQI +E+VG + + Y +FGF + + LSTRPE +G E W A L +L+S
Sbjct: 386 YMTKEQIKEEVVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDS 445
Query: 640 FGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
G+ + N GDGAFYGPKID + D + R QC TIQLDFQ+P RF+L+Y+
Sbjct: 446 IGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYI 496
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A ++G DL L + LE+L F++E H+ +H+L +A++R+Y L GP
Sbjct: 38 AKIDGETVDLMTELHKDSSLEILT-FEDEMGKWALRHTGSHMLAQAVKRLYPEVKLAIGP 96
Query: 171 PIENGFYYDMYLD 183
I+ GFYYD D
Sbjct: 97 AIDTGFYYDFEAD 109
>sp|A5N258|SYT_CLOK5 Threonine--tRNA ligase OS=Clostridium kluyveri (strain ATCC 8527 /
DSM 555 / NCIMB 10680) GN=thrS PE=3 SV=1
Length = 637
Score = 352 bits (902), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 174/411 (42%), Positives = 240/411 (58%), Gaps = 36/411 (8%)
Query: 282 MEGLMKDIVKEKQPFERLEMKKEDLIEMF--KYNPFKLRILKEKVNTPTTTAYRCGPLID 339
+EG M +I+KE ER E+ +E+ I+ K P+K+ ++K+ + Y+ G +D
Sbjct: 120 IEGKMNEIIKENIKLERFELPREEAIKFMEEKNEPYKVELIKDLPEDSIISFYKQGDFVD 179
Query: 340 LCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSSTYW 399
LC GPHV TG+ KA K+ + YW
Sbjct: 180 LCAGPHVPSTGRAKAVKLLSI----------------------------------AGAYW 205
Query: 400 EGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFF 459
G + + LQR+YG F L+++ KL EEA KRDHRK+G+E +LF HE PG FF
Sbjct: 206 RGNENNKMLQRIYGTVFEKKSDLQDYLKLMEEAKKRDHRKLGKELDLFSIHEEGPGFPFF 265
Query: 460 QPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENET 519
PKG I NTL F R + K + E+++P + N +LW SGHW HY ENM+ +++
Sbjct: 266 HPKGMVIRNTLQNFWREMHYKADYSEIMTPIILNEELWHRSGHWDHYKENMYFTKIDDGN 325
Query: 520 YALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHI 579
YA+KPMNCPG L++ + +RS+R+LP R A+ GV+HR+E SGAL GL RVR F QDDAHI
Sbjct: 326 YAIKPMNCPGSILVYKNDIRSYRDLPKRYAEMGVVHRHEKSGALHGLMRVRCFTQDDAHI 385
Query: 580 FCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNS 639
F T + I DEI+ +D + N Y IFGF + + LSTRPE +G E W A + L+ +L
Sbjct: 386 FVTKDDIADEIIKVIDLIDNFYKIFGFEYFVELSTRPEDSMGSDEDWEAATEGLKNALKM 445
Query: 640 FGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
G + N GDGAFYGPKID + D + R QC T+QLDFQ+P +F+L Y+
Sbjct: 446 VGLDYKINEGDGAFYGPKIDFHLKDCIGRTWQCGTVQLDFQMPEKFDLNYI 496
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A V+G + +L+ + +CK+E+L F++EE + H+ +H+L +A++R+Y L GP
Sbjct: 38 AVVDGKVVELNYKINKDCKVEILT-FEDEEGKKILRHTASHILAQAIKRLYPEVKLAIGP 96
Query: 171 PIENGFYYDMYLDGEAQMERITLWDKLKKQYDEEIAAKVPEEIQVTLPDGKIVPAKSWRT 230
I++GFYYD +D E L +K++ + +E I + E + LP + + +
Sbjct: 97 AIDSGFYYD--VDAEFSFTP-ELLEKIEGKMNEIIKENIKLE-RFELPREEAIKFMEEKN 152
Query: 231 TPYDVAAGISKGLADSTIIA 250
PY V + K L + +II+
Sbjct: 153 EPYKVE--LIKDLPEDSIIS 170
>sp|B9E5W0|SYT_CLOK1 Threonine--tRNA ligase OS=Clostridium kluyveri (strain NBRC 12016)
GN=thrS PE=3 SV=1
Length = 637
Score = 352 bits (902), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 174/411 (42%), Positives = 240/411 (58%), Gaps = 36/411 (8%)
Query: 282 MEGLMKDIVKEKQPFERLEMKKEDLIEMF--KYNPFKLRILKEKVNTPTTTAYRCGPLID 339
+EG M +I+KE ER E+ +E+ I+ K P+K+ ++K+ + Y+ G +D
Sbjct: 120 IEGKMNEIIKENIKLERFELPREEAIKFMEEKNEPYKVELIKDLPEDSIISFYKQGDFVD 179
Query: 340 LCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSSTYW 399
LC GPHV TG+ KA K+ + YW
Sbjct: 180 LCAGPHVPSTGRAKAVKLLSI----------------------------------AGAYW 205
Query: 400 EGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFF 459
G + + LQR+YG F L+++ KL EEA KRDHRK+G+E +LF HE PG FF
Sbjct: 206 RGNENNKMLQRIYGTVFEKKSDLQDYLKLMEEAKKRDHRKLGKELDLFSIHEEGPGFPFF 265
Query: 460 QPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENET 519
PKG I NTL F R + K + E+++P + N +LW SGHW HY ENM+ +++
Sbjct: 266 HPKGMVIRNTLQNFWREMHYKADYSEIMTPIILNEELWHRSGHWDHYKENMYFTKIDDGN 325
Query: 520 YALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHI 579
YA+KPMNCPG L++ + +RS+R+LP R A+ GV+HR+E SGAL GL RVR F QDDAHI
Sbjct: 326 YAIKPMNCPGSILVYKNDIRSYRDLPKRYAEMGVVHRHEKSGALHGLMRVRCFTQDDAHI 385
Query: 580 FCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNS 639
F T + I DEI+ +D + N Y IFGF + + LSTRPE +G E W A + L+ +L
Sbjct: 386 FVTKDDIADEIIKVIDLIDNFYKIFGFEYFVELSTRPEDSMGSDEDWEAATEGLKNALKM 445
Query: 640 FGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
G + N GDGAFYGPKID + D + R QC T+QLDFQ+P +F+L Y+
Sbjct: 446 VGLDYKINEGDGAFYGPKIDFHLKDCIGRTWQCGTVQLDFQMPEKFDLNYI 496
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A V+G + +L+ + +CK+E+L F++EE + H+ +H+L +A++R+Y L GP
Sbjct: 38 AVVDGKVVELNYKINKDCKVEILT-FEDEEGKKILRHTASHILAQAIKRLYPEVKLAIGP 96
Query: 171 PIENGFYYDMYLDGEAQMERITLWDKLKKQYDEEIAAKVPEEIQVTLPDGKIVPAKSWRT 230
I++GFYYD +D E L +K++ + +E I + E + LP + + +
Sbjct: 97 AIDSGFYYD--VDAEFSFTP-ELLEKIEGKMNEIIKENIKLE-RFELPREEAIKFMEEKN 152
Query: 231 TPYDVAAGISKGLADSTIIA 250
PY V + K L + +II+
Sbjct: 153 EPYKVE--LIKDLPEDSIIS 170
>sp|C3KTK0|SYT_CLOB6 Threonine--tRNA ligase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=thrS PE=3 SV=1
Length = 635
Score = 352 bits (902), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 174/411 (42%), Positives = 245/411 (59%), Gaps = 36/411 (8%)
Query: 282 MEGLMKDIVKEKQPFERLEMKKEDLIEMFKYN--PFKLRILKEKVNTPTTTAYRCGPLID 339
+E +K I+KE ER E+ +E+ I + K +K+ ++++ + Y+ G D
Sbjct: 120 IEAEIKKIIKENHKLERFELPREEAINLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTD 179
Query: 340 LCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSSTYW 399
LC GPHV TGK+K+ K L+ L + YW
Sbjct: 180 LCAGPHVPSTGKVKSVK----------------------------LLSL------AGAYW 205
Query: 400 EGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFF 459
G + + LQR+YG +F +L E+ + EEA KRDHRK+G+E +LF HE PG FF
Sbjct: 206 RGDENNKMLQRIYGTAFTKKSELDEYLNMLEEAKKRDHRKLGKELDLFSIHEEGPGFPFF 265
Query: 460 QPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENET 519
PKG I N L F R E+ K G+QE+ +P + N LW SGHW HY ENM+ ++++
Sbjct: 266 HPKGMIIRNILENFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDGD 325
Query: 520 YALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHI 579
YA+KPMNCPG L++ + + S+R+LPLR+++ G++HR+ELSGAL GL RVR F QDDAH+
Sbjct: 326 YAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHL 385
Query: 580 FCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNS 639
+ T EQI +EIVG + + Y +FGF + + LSTRPE +G E W A L +L+S
Sbjct: 386 YMTKEQIKEEIVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDS 445
Query: 640 FGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
G+ + N GDGAFYGPKID + D + R QC TIQLDFQ+P RF+L+Y+
Sbjct: 446 IGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYI 496
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A ++G DL L + LE+L F++E H+ AH+L +A++R+Y L GP
Sbjct: 38 AKIDGETVDLMTELHKDSSLEILT-FEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGP 96
Query: 171 PIENGFYYDMYLD 183
I+ GFYYD D
Sbjct: 97 AIDTGFYYDFEAD 109
>sp|B0S169|SYT_FINM2 Threonine--tRNA ligase OS=Finegoldia magna (strain ATCC 29328)
GN=thrS PE=3 SV=1
Length = 634
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/415 (42%), Positives = 240/415 (57%), Gaps = 36/415 (8%)
Query: 278 DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKY--NPFKLRILKEKVNTPTTTAYRCG 335
D +E MK IVKE R+E+ +++ +E FK +K+ +++ T T Y G
Sbjct: 116 DLEKIEAEMKKIVKENPKLVRVEISRKEALERFKNEGQDYKVDLIENFDEDATITLYEMG 175
Query: 336 PLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNS 395
+DLCRGPH+ IKAFK+ +
Sbjct: 176 DFVDLCRGPHLLDVKNIKAFKLLSI----------------------------------A 201
Query: 396 STYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPG 455
YW G + + LQR+YGISFP K L E+ EEA KRDHRKIG+E LF E PG
Sbjct: 202 GAYWRGDENNKMLQRIYGISFPKKKLLDEYLDRMEEAKKRDHRKIGKEMGLFSIQEEGPG 261
Query: 456 SCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDV 515
FF P G + N L +F++ + +RG+ ++ +P + N LW SGHW HY ENM+ +
Sbjct: 262 FPFFHPNGMVVLNELEKFLKEQLLERGYGQIKTPLILNEHLWHQSGHWDHYKENMYFTKI 321
Query: 516 ENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQD 575
+ E YA+KPMNCPG L++ + S+RELP+++A+ G +HR+ELSGAL GL RVR F QD
Sbjct: 322 DGEDYAIKPMNCPGSILVYKDELHSYRELPIKVAELGQVHRHELSGALHGLFRVRTFVQD 381
Query: 576 DAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEA 635
DAH+FC EQI +E+ +DF +YS FGF + + LSTRPE +G E W+ A L+
Sbjct: 382 DAHVFCLPEQIEEEVSKTIDFCDYIYSKFGFKYEVELSTRPEDSMGSDEDWDLAISSLKN 441
Query: 636 SLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
+L G P+ N GDGAFYGPKID + DA+ R QC TIQLDFQ+P RF++ Y+
Sbjct: 442 ALEHKGLPYKINEGDGAFYGPKIDFHLEDAIGRTWQCGTIQLDFQMPERFDMTYI 496
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 57/92 (61%), Gaps = 12/92 (13%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A V+G + L ++++C+++ + KFD++E VFWH+++H++ A++R+Y G GP
Sbjct: 38 AVVDGKIMGLMETIDSDCEVQFV-KFDDDEGKQVFWHTSSHLMAYAIQRLYPGTKFAIGP 96
Query: 171 PIENGFYYDMYLDG----------EAQMERIT 192
I++GFYYD+ D EA+M++I
Sbjct: 97 SIDSGFYYDLDTDHKFVPEDLEKIEAEMKKIV 128
>sp|C1FKN0|SYT_CLOBJ Threonine--tRNA ligase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=thrS PE=3 SV=1
Length = 635
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/411 (42%), Positives = 245/411 (59%), Gaps = 36/411 (8%)
Query: 282 MEGLMKDIVKEKQPFERLEMKKEDLIEMFKYN--PFKLRILKEKVNTPTTTAYRCGPLID 339
+E +K I+KE ER E+ +E+ I++ K +K+ ++++ + Y+ G D
Sbjct: 120 IEAEIKKIIKENHKLERFELPREEAIKLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTD 179
Query: 340 LCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSSTYW 399
LC GPHV TGK+K+ K L+ L + YW
Sbjct: 180 LCAGPHVPSTGKVKSVK----------------------------LLSL------AGAYW 205
Query: 400 EGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFF 459
G + LQR+YG +F +L E+ + EEA KRDHRK+G+E +LF HE PG FF
Sbjct: 206 RGDEKNKMLQRIYGTAFTKKSELDEYLNMIEEAKKRDHRKLGKELDLFSIHEEGPGFPFF 265
Query: 460 QPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENET 519
PKG + N L F R E+ K G+QE+ +P + N LW SGHW HY ENM+ ++++
Sbjct: 266 HPKGMIVRNILESFWREEHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDGD 325
Query: 520 YALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHI 579
YA+KPMNCPG L++ + + S+R+LPLR+++ G++HR+ELSGAL GL RVR F QDDAH+
Sbjct: 326 YAIKPMNCPGGILVYKNSMHSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHL 385
Query: 580 FCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNS 639
+ T EQI +EIVG + + Y +FGF + + LSTRPE +G E W A L +L+S
Sbjct: 386 YMTKEQIKEEIVGIIKLIDKFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDS 445
Query: 640 FGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
G+ + N GDGAFYGPKID + D + R QC TIQLDFQ+P RF+L+Y+
Sbjct: 446 IGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYI 496
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A ++G DL L + LE+L F++E H+ +H+L +A++R+Y L GP
Sbjct: 38 AKIDGETVDLMTELHKDSSLEILT-FEDEMGKWTLRHTGSHMLAQAVKRLYPEVKLAIGP 96
Query: 171 PIENGFYYDMYLD 183
I+ GFYYD D
Sbjct: 97 AIDTGFYYDFEAD 109
>sp|A3DET1|SYT_CLOTH Threonine--tRNA ligase OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=thrS PE=3 SV=1
Length = 635
Score = 350 bits (899), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/418 (41%), Positives = 243/418 (58%), Gaps = 36/418 (8%)
Query: 275 STLDFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMF--KYNPFKLRILKEKVNTPTTTAY 332
S D +E MK I+KE ER + +E+ I+ + P+K+ ++++ T + Y
Sbjct: 113 SVEDLEKIEEEMKKIIKEDYKLERFTLPREEAIKFMEERNEPYKVELIRDLPEGETISFY 172
Query: 333 RCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGP 392
+ G +DLC GPH+ TGK+KAFK+
Sbjct: 173 KQGDFVDLCAGPHIESTGKVKAFKLMSV-------------------------------- 200
Query: 393 HNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHEL 452
+ YW G + LQR+YG SF L + EEA KRDHRK+GRE +LF +E
Sbjct: 201 --AGAYWRGNEKNKMLQRIYGTSFTKKSDLDAYITRIEEAKKRDHRKLGRELDLFDIYEE 258
Query: 453 SPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFS 512
PG FF PKG + N L E+ R E+RK G+QE+ +P + N +LW SGHW HY ENM+
Sbjct: 259 GPGFPFFMPKGMVLRNVLEEYWREEHRKAGYQEIKTPIILNEELWHRSGHWDHYKENMYF 318
Query: 513 FDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRF 572
++ +A+KPMNCPG L++ ++ S+R+LP R+A+ G++HR+ELSG L GL RVR F
Sbjct: 319 TKIDEADFAIKPMNCPGGMLVYKRKLHSYRDLPQRLAELGLVHRHELSGVLHGLMRVRCF 378
Query: 573 QQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQ 632
QDDAHIF T +QI EI+G + + + Y +FGF +++ LSTRPE +G E W +A
Sbjct: 379 TQDDAHIFMTPDQIESEILGVISLIDDFYKVFGFKYHVELSTRPENSMGSDEDWERATNA 438
Query: 633 LEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
L+ +L G + N GDGAFYGPKID + D++ R QC TIQLDFQ+P RF+L Y+
Sbjct: 439 LKNALEKKGIDYKINEGDGAFYGPKIDFHLEDSIGRTWQCGTIQLDFQMPERFDLTYI 496
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 50/201 (24%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
++TL DG + T +VA IS GLA + +VNG + DL PLE +C L LL
Sbjct: 3 KITLKDGSVREYNEGITIK-EVAESISAGLARVALAGEVNGEVKDLSYPLENDCTLNLLT 61
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
FD+E + H+T+H+L +A+
Sbjct: 62 --------------------------------------FDDEGGRDAYRHTTSHILAQAV 83
Query: 159 ERVY-GGCLCYGPPIENGFYYDMYLDGEAQMERITLWDKLKKQYDEEIAAKVPEEIQV-- 215
+R+Y L GP IENGFYYD ++ +E + ++ +EE+ + E+ ++
Sbjct: 84 KRLYPDAKLAIGPAIENGFYYDFDVEKPFSVEDL-------EKIEEEMKKIIKEDYKLER 136
Query: 216 -TLPDGKIVPAKSWRTTPYDV 235
TLP + + R PY V
Sbjct: 137 FTLPREEAIKFMEERNEPYKV 157
>sp|A5FRB3|SYT_DEHSB Threonine--tRNA ligase OS=Dehalococcoides sp. (strain BAV1) GN=thrS
PE=3 SV=1
Length = 582
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/426 (43%), Positives = 249/426 (58%), Gaps = 41/426 (9%)
Query: 271 FSLVSTL---DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKLRILKEKVNTP 327
F L TL D P +E M +VK PF R EM K++ ++F P+KL +L + +
Sbjct: 52 FDLPRTLTPEDLPEIETRMNQLVKSNLPFRREEMSKDEARKLFANQPYKLELLND-ITDE 110
Query: 328 TTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLID 387
T + YR G DLCRGPHV +T K+KAFK+
Sbjct: 111 TVSIYRQGNFCDLCRGPHVNYTSKVKAFKLLSI--------------------------- 143
Query: 388 LCRGPHNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELF 447
+ YW G LQR+YG +F D L E+ + EEAAKRDHRK+G+E ELF
Sbjct: 144 -------AGAYWRGDEKRPMLQRIYGAAFLDKASLAEYLNMLEEAAKRDHRKLGKELELF 196
Query: 448 FFH-ELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHY 506
H E+ G + P GA + + + EF + E+ KRG+ V +P++ V LW+TSGHW Y
Sbjct: 197 SLHQEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKRGYDLVYTPHIAKVDLWKTSGHWGFY 256
Query: 507 SENMFS-FDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTG 565
ENM+S D++ E Y LKPMNC H L+F +R RS++ELP+RMA+ G ++R E SG L G
Sbjct: 257 RENMYSPMDIDGEEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELGTVYRYERSGVLHG 316
Query: 566 LTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFT-FNLRLSTRPEKYLGELE 624
L+RVR F QDDAHIFC +Q+ E+V LD + + FGFT + + LSTRPEKY+GEL+
Sbjct: 317 LSRVRGFTQDDAHIFCLYDQLEKEVVKVLDLAKFMIDTFGFTKYKVMLSTRPEKYVGELD 376
Query: 625 VWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIR 684
W A L +L + P+ +PG+G FYGPKIDI DAL R Q TIQ+DFQLP R
Sbjct: 377 KWEYATDILAKALEANQIPYQVDPGEGVFYGPKIDIKFEDALGRAWQGPTIQVDFQLPER 436
Query: 685 FNLAYV 690
F+++ V
Sbjct: 437 FDVSVV 442
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 133 LLNKFDNEEASS---VFWHSTAHVLGEAMERVYGGC-LCYGPPIENGFYYDMYL 182
+ N+ D + S + HS AH++ EA+ ++ L GP I+ GFYYD L
Sbjct: 1 MANQIDESKPISDLEIMRHSAAHIMAEAVLSMFPEAKLGIGPAIDTGFYYDFDL 54
>sp|Q3ZXB5|SYT_DEHSC Threonine--tRNA ligase OS=Dehalococcoides sp. (strain CBDB1)
GN=thrS PE=3 SV=1
Length = 582
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/426 (43%), Positives = 249/426 (58%), Gaps = 41/426 (9%)
Query: 271 FSLVSTL---DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKLRILKEKVNTP 327
F L TL D P +E M +VK PF R EM K++ ++F P+KL +L + +
Sbjct: 52 FDLPRTLTPEDLPEIETRMNQLVKSNLPFRREEMSKDEARKLFANQPYKLELLND-ITDE 110
Query: 328 TTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLID 387
T + YR G DLCRGPHV +T K+KAFK+
Sbjct: 111 TVSIYRQGNFCDLCRGPHVNYTSKVKAFKLLSI--------------------------- 143
Query: 388 LCRGPHNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELF 447
+ YW G LQR+YG +F D L E+ + EEAAKRDHRK+G+E ELF
Sbjct: 144 -------AGAYWRGDEKRPMLQRIYGAAFLDKASLAEYLNMLEEAAKRDHRKLGKELELF 196
Query: 448 FFH-ELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHY 506
H E+ G + P GA + + + EF + E+ KRG+ V +P++ V LW+TSGHW Y
Sbjct: 197 SLHQEIGGGLVNWLPNGAIVRHLIEEFWKKEHLKRGYDLVYTPHIAKVDLWKTSGHWGFY 256
Query: 507 SENMFS-FDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTG 565
ENM+S D++ E Y LKPMNC H L+F +R RS++ELP+RMA+ G ++R E SG L G
Sbjct: 257 RENMYSPMDIDGEEYVLKPMNCVYHILMFKNRTRSYKELPIRMAELGTVYRYERSGVLHG 316
Query: 566 LTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFT-FNLRLSTRPEKYLGELE 624
L+RVR F QDDAHIFC +Q+ E+V LD + + FGFT + + LSTRPEKY+GEL+
Sbjct: 317 LSRVRGFTQDDAHIFCLYDQLEKEVVKVLDLAKFMIDTFGFTKYKVMLSTRPEKYVGELD 376
Query: 625 VWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIR 684
W A L +L + P+ +PG+G FYGPKIDI DAL R Q TIQ+DFQLP R
Sbjct: 377 KWEYATDILAKALEANQIPYQVDPGEGVFYGPKIDIKFEDALGRTWQGPTIQVDFQLPER 436
Query: 685 FNLAYV 690
F+++ V
Sbjct: 437 FDVSVV 442
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 133 LLNKFDNEEASS---VFWHSTAHVLGEAMERVYGGC-LCYGPPIENGFYYDMYL 182
+ N+ D + S + HS AH++ EA+ ++ L GP I+ GFYYD L
Sbjct: 1 MANQIDESKPISDLEIMRHSAAHIMAEAVLSMFPEAKLGIGPAIDTGFYYDFDL 54
>sp|Q256F9|SYT_CHLFF Threonine--tRNA ligase OS=Chlamydophila felis (strain Fe/C-56)
GN=thrS PE=3 SV=1
Length = 635
Score = 349 bits (896), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 174/419 (41%), Positives = 250/419 (59%), Gaps = 36/419 (8%)
Query: 274 VSTLDFPVMEGLMKDIVKEKQPFERLEMK-KEDLIEMFKYNPFKLRILKEKVNTPTTTAY 332
+S DFP +E +++ I KE+ + K++ ++ F NPFK+ +++E T Y
Sbjct: 108 ISEDDFPAIENMVEQIAKERFEISKKTFNDKQEALQEFASNPFKVELIQEFPEDENITCY 167
Query: 333 RCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGP 392
G +DLCRGPH+ T +KAFK+ +
Sbjct: 168 SQGEFMDLCRGPHLPSTAPVKAFKLLR--------------------------------- 194
Query: 393 HNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHEL 452
S+ YW G ESL R+YG+SFP K+LKE EEA KRDHR +G + +LF E
Sbjct: 195 -TSAAYWRGDPSRESLVRIYGVSFPTTKELKEHLHQLEEAKKRDHRVLGTKLDLFSQQEC 253
Query: 453 SPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFS 512
S G FF P+G I++ L+ + + ++ G++E+++P + N LW+ SGHW++Y ENM++
Sbjct: 254 SAGMPFFHPRGMIIWDALIGYWKRLHQLAGYKEILTPQLVNRSLWEVSGHWSNYKENMYT 313
Query: 513 FDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRF 572
++ E YA+KPMNCPG L + R+ S++E PLR+A+ G +HR E+SGAL+GL RVR F
Sbjct: 314 LKIDEEDYAIKPMNCPGCMLYYKTRLHSYKEFPLRIAEIGHVHRYEISGALSGLMRVRAF 373
Query: 573 QQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEK-YLGELEVWNKAEK 631
QDDAH+F T EQ+ +E + L+ + +YS FG ++L LSTRPEK +G E+W+ A
Sbjct: 374 HQDDAHVFLTPEQVEEETLNILNLVSELYSTFGLEYHLELSTRPEKATIGSDELWDLATA 433
Query: 632 QLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
LE +L + P+ NPGDGAFYGPKIDI + DA++R QC TIQLD LP RF L Y
Sbjct: 434 ALERALINSNTPFVINPGDGAFYGPKIDIHVKDAIQRTWQCGTIQLDMFLPERFELEYT 492
Score = 41.6 bits (96), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 106 SSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC 165
S F +N + DL L L+ + F + E +F H++AH+L +A+ R++
Sbjct: 29 SHYFAGVVINDQIKDLSTTLSEGDVLKFVT-FTDPEGREIFLHTSAHMLAQAVLRLWPQA 87
Query: 166 L-CYGPPIENGFYYDM 180
+ GP I+ GFYYD
Sbjct: 88 IPTIGPVIDLGFYYDF 103
>sp|C0QAP1|SYT_DESAH Threonine--tRNA ligase OS=Desulfobacterium autotrophicum (strain
ATCC 43914 / DSM 3382 / HRM2) GN=thrS PE=3 SV=1
Length = 636
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 204/542 (37%), Positives = 280/542 (51%), Gaps = 117/542 (21%)
Query: 213 IQVTLPDGKIVPAKSWRTTP--YDVAAGISKGLA--------DSTIIAKDWTRAN----- 257
I +TLPD I KS++ P DVA GIS+G A D ++ D N
Sbjct: 2 INITLPDDSI---KSFKEYPKGMDVARGISEGFARNCVAMEIDGQLLDLDVEIRNDCAVR 58
Query: 258 --------------KSRGNELCESSQ------------------YFSL----VSTLDFPV 281
S + + E+ Q Y+ + +S DFP
Sbjct: 59 LITTRDAEAVEILRHSAAHVMAEAVQNLHADAKLTIGPVVEDGFYYDIDMAPISDADFPK 118
Query: 282 MEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKLRILKEKVNTPTTTAYRCGPLIDLC 341
+E M IVK K+PF+R E+ K++
Sbjct: 119 IEAEMAKIVKAKKPFQRSEITKQE------------------------------------ 142
Query: 342 RGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPH-------- 393
A ++ K NP+K+ ++ ++ T + Y+ G +DLCRGPH
Sbjct: 143 ------------ALELFKDNPYKVELIN-GLDDQTISIYQQGDFVDLCRGPHIPHTGMIK 189
Query: 394 ------NSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELF 447
S YW + LQR+YG +F D K+LK + L EEA KRDHRKIG LF
Sbjct: 190 GLKLMKTSGAYWRADQEKAQLQRLYGTAFFDKKELKAYLHLIEEAKKRDHRKIGTRMGLF 249
Query: 448 FFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYS 507
FH+ + G FF KG ++N L+ + R E+R G+ E +P + + LW+ SGHW +Y
Sbjct: 250 SFHQEAAGMPFFHAKGMEMWNELLAYWRDEHRAAGYVETKTPVMMSRHLWEKSGHWENYR 309
Query: 508 ENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLT 567
ENM++ V+ E YA+KPMNCPG L++ S+R+LPLR + G++HR+ELSGAL+GL
Sbjct: 310 ENMYTSVVDGEEYAIKPMNCPGGMLLYKTESHSYRDLPLRAGEIGLVHRHELSGALSGLF 369
Query: 568 RVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWN 627
RVR F QDDAHIF T EQI EI+G L+ + +YS FG F+L LSTRP+K +G E W
Sbjct: 370 RVRAFHQDDAHIFMTPEQIESEILGVLELVERIYSRFGLGFHLELSTRPKKSIGSDEQWA 429
Query: 628 KAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNL 687
+A L+ +L+ +G+P+ N GDGAFYGPKIDI I DAL R QC T+QLD LP RF+L
Sbjct: 430 EATNGLKNALDKYGQPYAINEGDGAFYGPKIDIHIKDALGRTWQCGTVQLDMALPERFDL 489
Query: 688 AY 689
Y
Sbjct: 490 TY 491
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 59/215 (27%)
Query: 40 VTLPDGKIVPAKSWRTTP--YDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELL 97
+TLPD I KS++ P DVA GIS+G A + + +++G L
Sbjct: 4 ITLPDDSI---KSFKEYPKGMDVARGISEGFARNCVAMEIDGQLL--------------- 45
Query: 98 NKFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEA 157
DLD + +C + L+ D EA + HS AHV+ EA
Sbjct: 46 ----------------------DLDVEIRNDCAVRLITTRD-AEAVEILRHSAAHVMAEA 82
Query: 158 MERVYGGC-LCYGPPIENGFYYDMYLDGEAQMERITLWD--KLKKQYDEEIAAKVP-EEI 213
++ ++ L GP +E+GFYYD+ M I+ D K++ + + + AK P +
Sbjct: 83 VQNLHADAKLTIGPVVEDGFYYDI------DMAPISDADFPKIEAEMAKIVKAKKPFQRS 136
Query: 214 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTI 248
++T K + ++ PY V + GL D TI
Sbjct: 137 EIT----KQEALELFKDNPYKVE--LINGLDDQTI 165
>sp|Q9WZJ9|SYT_THEMA Threonine--tRNA ligase OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=thrS PE=3 SV=1
Length = 640
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 180/428 (42%), Positives = 243/428 (56%), Gaps = 64/428 (14%)
Query: 278 DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKLRILKEKVNTPTTTAYRCGPL 337
D P +E MK I+KE P ER E+ KE+ E+F+
Sbjct: 117 DLPKIEQEMKKIIKENLPIERKEISKEEARELFRDQ------------------------ 152
Query: 338 IDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSST 397
P+KL +++E + T YR G +DLCRGPH ST
Sbjct: 153 ------------------------PYKLELIEE-IEGNRVTIYRQGEFVDLCRGPHLPST 187
Query: 398 --------------YWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGRE 443
YW G L RVYG +F + L + K EEA +RDHRK+G +
Sbjct: 188 GIVKHFKLLSVSGAYWRGSEKNPMLTRVYGTAFAKKEDLDNYLKFLEEAQRRDHRKLGPQ 247
Query: 444 QELFFFH-ELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGH 502
ELF + E +PG FF PKG + N L++F R +R+RG+QE+ +P + N +LW+ SGH
Sbjct: 248 LELFMLNTEYAPGMPFFLPKGVVVLNELMKFSRELHRERGYQEIFTPLIMNEQLWKISGH 307
Query: 503 WAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGA 562
W HY+ENM+ + + E YA+KPMNCPGH L++ R S+R+LPLR +FG +HR E SG
Sbjct: 308 WDHYAENMYFIEKDEERYAVKPMNCPGHILVYKSRTVSYRDLPLRFFEFGRVHRYERSGV 367
Query: 563 LTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGE 622
L GL RVR F QDDAHIFCT +QI +EI+G LD + +YS FGFT+ + LST PE ++G+
Sbjct: 368 LHGLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLINTIYSQFGFTYRVELSTMPEDHMGD 427
Query: 623 LEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLP 682
+W KA L+ +L G + N G+GAFYGPKID I D++ R QCATIQLDF +P
Sbjct: 428 EAIWEKATTALKNALERAGLSYKVNEGEGAFYGPKIDFHIRDSIGREWQCATIQLDFMMP 487
Query: 683 IRFNLAYV 690
+FN+ Y+
Sbjct: 488 EKFNVTYI 495
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGG---CLCY 168
A VNG LWDL RP+E +C+L L+ ++ EA + H+ AH+L +A+ R+YG L
Sbjct: 36 AVVNGELWDLKRPIENDCELRLVT-LEDPEAPEFYRHTMAHILAQAVMRLYGKENVKLGI 94
Query: 169 GPPIENGFYYD 179
GP IENGFYYD
Sbjct: 95 GPTIENGFYYD 105
>sp|O84585|SYT_CHLTR Threonine--tRNA ligase OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=thrS PE=3 SV=2
Length = 635
Score = 348 bits (894), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 191/491 (38%), Positives = 275/491 (56%), Gaps = 51/491 (10%)
Query: 211 EEIQVTLPDGKIVPAKSW-----RTTPYDVAAGISKGLADSTIIAKDWTRANKSRGNELC 265
+++ TL DG V +W R +A I LA + + + W A + G +
Sbjct: 42 KDLSTTLQDGDTVLFLTWDDPKGREIFLHTSAHI---LAQAVL--RLWPSAQPTIG-PVI 95
Query: 266 ESSQYFSL----VSTLDFPVMEGLMKDIVKEKQPFERLEM-KKEDLIEMFKYNPFKLRIL 320
+ Y+ +S DFP +E + K I +EK P R KE + F NPFK ++
Sbjct: 96 DQGFYYDFANLSISEEDFPAIEAMAKTIAEEKFPISRQVFPDKEAALAYFSQNPFKAELI 155
Query: 321 KEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAY 380
E +AY G +DLCRGPH+ T +KAFK+ +
Sbjct: 156 AELPEEVEISAYTQGEFLDLCRGPHLPSTAPVKAFKLLR--------------------- 194
Query: 381 RCGPLIDLCRGPHNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKI 440
SS YW+G ESL R+YG+SFP K+LKE EEA KRDHR +
Sbjct: 195 -------------TSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVL 241
Query: 441 GREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTS 500
G + +LF S G FF P+G ++N LV++ + +++ G+Q++ +P + N +LW+ S
Sbjct: 242 GTKLDLFSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEIS 301
Query: 501 GHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELS 560
GHW +Y ENM++ V+ E YA+KPMNCPG L + ++ S+RE PLR+A+ G +HR+ELS
Sbjct: 302 GHWENYKENMYTLTVDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELS 361
Query: 561 GALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEK-Y 619
GAL+GL RVR F QDDAH+F T EQ+ +E + L+ + +Y FG ++L LSTRPE+
Sbjct: 362 GALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGT 421
Query: 620 LGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDF 679
+G ++W A K L+ +L +P+ +PG+GAFYGPKIDI + DA+ R QC TIQLD
Sbjct: 422 IGSDDLWELATKALKRALVKSQKPFIISPGEGAFYGPKIDIHVKDAINRTWQCGTIQLDM 481
Query: 680 QLPIRFNLAYV 690
LP RF+L Y
Sbjct: 482 FLPERFDLKYT 492
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 89 ETNCKLELLNKFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWH 148
E ++L NK + S F A +N DL L+ + L +D+ + +F H
Sbjct: 15 EGASAMDLANKM---KQSHCFAGALINDQEKDLSTTLQDGDTVLFLT-WDDPKGREIFLH 70
Query: 149 STAHVLGEAMERVYGGCL-CYGPPIENGFYYD 179
++AH+L +A+ R++ GP I+ GFYYD
Sbjct: 71 TSAHILAQAVLRLWPSAQPTIGPVIDQGFYYD 102
>sp|Q3KLB6|SYT_CHLTA Threonine--tRNA ligase OS=Chlamydia trachomatis serovar A (strain
HAR-13 / ATCC VR-571B) GN=thrS PE=3 SV=1
Length = 635
Score = 348 bits (894), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 191/491 (38%), Positives = 275/491 (56%), Gaps = 51/491 (10%)
Query: 211 EEIQVTLPDGKIVPAKSW-----RTTPYDVAAGISKGLADSTIIAKDWTRANKSRGNELC 265
+++ TL DG V +W R +A I LA + + + W A + G +
Sbjct: 42 KDLSTTLQDGDTVLFLTWDDPKGREIFLHTSAHI---LAQAVL--RLWPSAQPTIG-PVI 95
Query: 266 ESSQYFSL----VSTLDFPVMEGLMKDIVKEKQPFERLEM-KKEDLIEMFKYNPFKLRIL 320
+ Y+ +S DFP +E + K I +EK P R KE + F NPFK ++
Sbjct: 96 DQGFYYDFANLSISEEDFPAIEAMAKTIAEEKFPISRQVFPDKEAALAYFSQNPFKAELI 155
Query: 321 KEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAY 380
E +AY G +DLCRGPH+ T +KAFK+ +
Sbjct: 156 AELPEEVEISAYTQGEFLDLCRGPHLPSTAPVKAFKLLR--------------------- 194
Query: 381 RCGPLIDLCRGPHNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKI 440
SS YW+G ESL R+YG+SFP K+LKE EEA KRDHR +
Sbjct: 195 -------------TSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVL 241
Query: 441 GREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTS 500
G + +LF S G FF P+G ++N LV++ + +++ G+Q++ +P + N +LW+ S
Sbjct: 242 GTKLDLFSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEIS 301
Query: 501 GHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELS 560
GHW +Y ENM++ V+ E YA+KPMNCPG L + ++ S+RE PLR+A+ G +HR+ELS
Sbjct: 302 GHWENYKENMYTLTVDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELS 361
Query: 561 GALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEK-Y 619
GAL+GL RVR F QDDAH+F T EQ+ +E + L+ + +Y FG ++L LSTRPE+
Sbjct: 362 GALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGT 421
Query: 620 LGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDF 679
+G ++W A K L+ +L +P+ +PG+GAFYGPKIDI + DA+ R QC TIQLD
Sbjct: 422 IGSDDLWELATKALKRALVKSQKPFIISPGEGAFYGPKIDIHVKDAINRTWQCGTIQLDM 481
Query: 680 QLPIRFNLAYV 690
LP RF+L Y
Sbjct: 482 FLPERFDLKYT 492
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 89 ETNCKLELLNKFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWH 148
E ++L NK + S F A +N DL L+ + L +D+ + +F H
Sbjct: 15 EGASAMDLANKM---KQSHCFAGALINDQEKDLSTTLQDGDTVLFLT-WDDPKGREIFLH 70
Query: 149 STAHVLGEAMERVYGGCL-CYGPPIENGFYYD 179
++AH+L +A+ R++ GP I+ GFYYD
Sbjct: 71 TSAHILAQAVLRLWPSAQPTIGPVIDQGFYYD 102
>sp|A7GI05|SYT_CLOBL Threonine--tRNA ligase OS=Clostridium botulinum (strain Langeland /
NCTC 10281 / Type F) GN=thrS PE=3 SV=1
Length = 635
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/411 (41%), Positives = 243/411 (59%), Gaps = 36/411 (8%)
Query: 282 MEGLMKDIVKEKQPFERLEMKKEDLIEMFKYN--PFKLRILKEKVNTPTTTAYRCGPLID 339
+E +K I+KE ER E+ +E+ I + K +K+ ++++ + Y+ G D
Sbjct: 120 IEAEIKKIIKENHKLERFELPREEAINLMKEKNEDYKVELIEDLPEGEVISFYKQGDFTD 179
Query: 340 LCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNSSTYW 399
LC GPHV TGK+K+ K L+ L + YW
Sbjct: 180 LCAGPHVPSTGKVKSVK----------------------------LLSL------AGAYW 205
Query: 400 EGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPGSCFF 459
G + LQR+YG +F +L E+ + EEA KRDHRK+G+E +LF HE PG FF
Sbjct: 206 RGDEKNKMLQRIYGTAFTKKSELDEYLNMIEEAKKRDHRKLGKELDLFSIHEEGPGFPFF 265
Query: 460 QPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDVENET 519
PKG + N L F R ++ K G+QE+ +P + N LW SGHW HY ENM+ ++++
Sbjct: 266 HPKGMIVRNILESFWREKHTKAGYQEIRTPLILNEALWHQSGHWDHYKENMYFTNIDDGD 325
Query: 520 YALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHI 579
YA+KPMNCPG L++ + S+R+LPLR+++ G++HR+ELSGAL GL RVR F QDDAH+
Sbjct: 326 YAIKPMNCPGGILVYKSSMHSYRDLPLRLSELGIVHRHELSGALHGLMRVRCFTQDDAHL 385
Query: 580 FCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEASLNS 639
+ T EQI +E++G + + Y +FGF + + LSTRPE +G E W A L +L+S
Sbjct: 386 YMTKEQIKEEVIGIIKLIDEFYKLFGFEYFVELSTRPEDSMGSDEDWEIATNGLREALDS 445
Query: 640 FGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
G+ + N GDGAFYGPKID + D + R QC TIQLDFQ+P RF+L+Y+
Sbjct: 446 IGKEYRVNEGDGAFYGPKIDFHLKDCIGRTWQCGTIQLDFQMPERFDLSYI 496
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A ++G DL L + LE+L F++E H+ AH+L +A++R+Y L GP
Sbjct: 38 AKIDGETVDLMTELHKDSSLEILT-FEDEMGKWALRHTGAHILAQAVKRLYPEVKLAIGP 96
Query: 171 PIENGFYYDMYLD 183
I+ GFYYD D
Sbjct: 97 AIDTGFYYDFEAD 109
>sp|B0BA34|SYT_CHLTB Threonine--tRNA ligase OS=Chlamydia trachomatis serovar L2b (strain
UCH-1/proctitis) GN=thrS PE=3 SV=1
Length = 635
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/491 (38%), Positives = 275/491 (56%), Gaps = 51/491 (10%)
Query: 211 EEIQVTLPDGKIVPAKSW-----RTTPYDVAAGISKGLADSTIIAKDWTRANKSRGNELC 265
+++ TL DG V +W R +A I LA + + + W A + G +
Sbjct: 42 KDLSTTLQDGDTVLFLTWDDPKGREIFLHTSAHI---LAQAVL--RLWPSAQPTIG-PVI 95
Query: 266 ESSQYFSL----VSTLDFPVMEGLMKDIVKEKQPFERLEM-KKEDLIEMFKYNPFKLRIL 320
+ Y+ +S DFP +E + K I +EK P R KE + F NPFK ++
Sbjct: 96 DQGFYYDFANLSISEEDFPAIEAMAKTIAEEKFPISRQVFPDKEAALAYFSQNPFKAELI 155
Query: 321 KEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAY 380
E +AY G +DLCRGPH+ T +KAFK+ +
Sbjct: 156 AELPEEVEISAYTQGEFLDLCRGPHLPSTAPVKAFKLLR--------------------- 194
Query: 381 RCGPLIDLCRGPHNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKI 440
SS YW+G ESL R+YG+SFP K+LKE EEA KRDHR +
Sbjct: 195 -------------TSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVL 241
Query: 441 GREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTS 500
G + +LF S G FF P+G ++N LV++ + +++ G+Q++ +P + N +LW+ S
Sbjct: 242 GTKLDLFSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEIS 301
Query: 501 GHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELS 560
GHW +Y ENM++ V+ E YA+KPMNCPG L + ++ S+RE PLR+A+ G +HR+ELS
Sbjct: 302 GHWENYKENMYTLTVDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELS 361
Query: 561 GALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEK-Y 619
GAL+GL RVR F QDDAH+F T EQ+ +E + L+ + +Y FG ++L LSTRPE+
Sbjct: 362 GALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGT 421
Query: 620 LGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDF 679
+G ++W A + L+ +L +P+ +PG+GAFYGPKIDI + DA+ R QC TIQLD
Sbjct: 422 IGSDDLWELATEALKRALVKSQKPFIISPGEGAFYGPKIDIHVKDAINRTWQCGTIQLDM 481
Query: 680 QLPIRFNLAYV 690
LP RF+L Y
Sbjct: 482 FLPERFDLKYT 492
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 89 ETNCKLELLNKFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWH 148
E ++L NK + S F A +N DL L+ + L +D+ + +F H
Sbjct: 15 EGASAMDLANKM---KQSHCFVGALINDQEKDLSTTLQDGDTVLFLT-WDDPKGREIFLH 70
Query: 149 STAHVLGEAMERVYGGCL-CYGPPIENGFYYD 179
++AH+L +A+ R++ GP I+ GFYYD
Sbjct: 71 TSAHILAQAVLRLWPSAQPTIGPVIDQGFYYD 102
>sp|B0B8F5|SYT_CHLT2 Threonine--tRNA ligase OS=Chlamydia trachomatis serovar L2 (strain
434/Bu / ATCC VR-902B) GN=thrS PE=3 SV=1
Length = 635
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/491 (38%), Positives = 275/491 (56%), Gaps = 51/491 (10%)
Query: 211 EEIQVTLPDGKIVPAKSW-----RTTPYDVAAGISKGLADSTIIAKDWTRANKSRGNELC 265
+++ TL DG V +W R +A I LA + + + W A + G +
Sbjct: 42 KDLSTTLQDGDTVLFLTWDDPKGREIFLHTSAHI---LAQAVL--RLWPSAQPTIG-PVI 95
Query: 266 ESSQYFSL----VSTLDFPVMEGLMKDIVKEKQPFERLEM-KKEDLIEMFKYNPFKLRIL 320
+ Y+ +S DFP +E + K I +EK P R KE + F NPFK ++
Sbjct: 96 DQGFYYDFANLSISEEDFPAIEAMAKTIAEEKFPISRQVFPDKEAALAYFSQNPFKAELI 155
Query: 321 KEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAY 380
E +AY G +DLCRGPH+ T +KAFK+ +
Sbjct: 156 AELPEEVEISAYTQGEFLDLCRGPHLPSTAPVKAFKLLR--------------------- 194
Query: 381 RCGPLIDLCRGPHNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKI 440
SS YW+G ESL R+YG+SFP K+LKE EEA KRDHR +
Sbjct: 195 -------------TSSAYWKGDPSRESLIRIYGVSFPTTKELKEHLHQLEEAKKRDHRVL 241
Query: 441 GREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTS 500
G + +LF S G FF P+G ++N LV++ + +++ G+Q++ +P + N +LW+ S
Sbjct: 242 GTKLDLFSQQTCSAGMPFFHPRGMVVWNALVDYWKRLHQRAGYQQIQTPQLMNRELWEIS 301
Query: 501 GHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELS 560
GHW +Y ENM++ V+ E YA+KPMNCPG L + ++ S+RE PLR+A+ G +HR+ELS
Sbjct: 302 GHWENYKENMYTLTVDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELS 361
Query: 561 GALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEK-Y 619
GAL+GL RVR F QDDAH+F T EQ+ +E + L+ + +Y FG ++L LSTRPE+
Sbjct: 362 GALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLEYHLELSTRPEQGT 421
Query: 620 LGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDF 679
+G ++W A + L+ +L +P+ +PG+GAFYGPKIDI + DA+ R QC TIQLD
Sbjct: 422 IGSDDLWELATEALKRALVKSQKPFIISPGEGAFYGPKIDIHVKDAINRTWQCGTIQLDM 481
Query: 680 QLPIRFNLAYV 690
LP RF+L Y
Sbjct: 482 FLPERFDLKYT 492
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 89 ETNCKLELLNKFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWH 148
E ++L NK + S F A +N DL L+ + L +D+ + +F H
Sbjct: 15 EGASAMDLANKM---KQSHCFVGALINDQEKDLSTTLQDGDTVLFLT-WDDPKGREIFLH 70
Query: 149 STAHVLGEAMERVYGGCL-CYGPPIENGFYYD 179
++AH+L +A+ R++ GP I+ GFYYD
Sbjct: 71 TSAHILAQAVLRLWPSAQPTIGPVIDQGFYYD 102
>sp|Q30Y11|SYT_DESDG Threonine--tRNA ligase OS=Desulfovibrio desulfuricans (strain G20)
GN=thrS PE=3 SV=1
Length = 644
Score = 347 bits (889), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 176/416 (42%), Positives = 242/416 (58%), Gaps = 38/416 (9%)
Query: 278 DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMFK--YNPFKLRILKEKVNTPTTTAYRCG 335
D +E M I+K PFER M K++ +MF +KL ++ + V + YR G
Sbjct: 116 DLEAIEAEMDKIIKAAHPFERSVMSKDEAKKMFADMGETYKLELI-DAVPDDIVSIYRSG 174
Query: 336 PLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNS 395
+DLCRGPH+ TG I AFK+ +
Sbjct: 175 DFVDLCRGPHIPDTGCINAFKLMSV----------------------------------A 200
Query: 396 STYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHEL-SP 454
YW G L RVYG +FPD K+LK + EEA KRDHRK+G + +LF F E
Sbjct: 201 GAYWRGDEKNAMLSRVYGTAFPDEKELKSYLNRIEEAKKRDHRKLGTQLDLFSFQEEGGS 260
Query: 455 GSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFD 514
G ++ PKGA + L +F R E+ KRG+Q V +P + +LW+ SGH+ +Y ENM+ D
Sbjct: 261 GMVYWHPKGALVRAILEDFERKEHLKRGYQIVQTPQILRRELWEKSGHYDNYRENMYFTD 320
Query: 515 VENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQ 574
++ + Y +KPMNC H LI+ R S+R+LP+R+ + GV+HR+E SG L GL RVR+F Q
Sbjct: 321 IDEQPYGVKPMNCVAHMLIYKSRSHSYRDLPVRLFELGVVHRHEKSGVLHGLLRVRQFTQ 380
Query: 575 DDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLE 634
DDAHI CT +Q+ EIVG L+F+R+V +FGF +++ +STRPEK +G E W++A L
Sbjct: 381 DDAHIICTPDQLESEIVGVLNFVRDVMGVFGFEYSMEVSTRPEKSIGSDEDWDRATSALV 440
Query: 635 ASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
+L G P+ N GDGAFYGPKID+ + D L R QCAT+Q DF LP RF+L Y+
Sbjct: 441 KALEGQGLPYEINEGDGAFYGPKIDVKLRDCLGREWQCATVQCDFTLPDRFDLVYI 496
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A G + DL + T C+ D+ E + HS AHV+ +A++R++ G + GP
Sbjct: 37 ARCGGTMLDLTATVPTACETLEPVYADSPEGLGLIRHSAAHVMADAVQRLFPGVKVTIGP 96
Query: 171 PIENGFYYD 179
IENGFYYD
Sbjct: 97 AIENGFYYD 105
>sp|Q821I3|SYT_CHLCV Threonine--tRNA ligase OS=Chlamydophila caviae (strain GPIC)
GN=thrS PE=3 SV=1
Length = 635
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 175/419 (41%), Positives = 249/419 (59%), Gaps = 36/419 (8%)
Query: 274 VSTLDFPVMEGLMKDIVKEKQPFERLEMK-KEDLIEMFKYNPFKLRILKEKVNTPTTTAY 332
VS D +E +M+ IV+EK + KE+ ++ F +N FK +++E + TAY
Sbjct: 108 VSEEDLLAIENMMEQIVQEKLEVSKKTFNGKEEALKEFMHNAFKAELIQELPEGESITAY 167
Query: 333 RCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGP 392
G +DLCRGPH+ T +KAFK+ +
Sbjct: 168 SQGEFMDLCRGPHLPSTAPVKAFKLLR--------------------------------- 194
Query: 393 HNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHEL 452
S+ YW G ESL R+YGISFP K+LKE EEA KRDHR +G + +LF E
Sbjct: 195 -TSAAYWRGDPSRESLVRIYGISFPTTKELKEHLHQLEEAKKRDHRVLGAKLDLFSQQEC 253
Query: 453 SPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFS 512
S G FF P+G +++ L+ + + ++ G++++++P + N LW+TSGHW++Y NM++
Sbjct: 254 SAGMPFFHPRGMIVWDALIGYWQRLHQLAGYKQILTPQLMNRSLWETSGHWSNYKANMYT 313
Query: 513 FDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRF 572
++ E YA+KPMNCPG L + R+ S++E PLR+A+ G +HR E+SGAL+GL RVR F
Sbjct: 314 LKIDEEDYAIKPMNCPGCMLYYKTRLHSYKEFPLRIAEIGHVHRYEVSGALSGLMRVRAF 373
Query: 573 QQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEK-YLGELEVWNKAEK 631
QDDAH+F T EQ+ +E + L+ + +YS FG ++L LSTRPEK +G E+W A
Sbjct: 374 HQDDAHVFLTPEQVEEETLNILNLVSELYSTFGLEYHLELSTRPEKDTIGSDELWELATS 433
Query: 632 QLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
LE +L + P+ NPGDGAFYGPKIDI + DA++R QC TIQLD LP RF L Y
Sbjct: 434 ALERALINSNTPFIINPGDGAFYGPKIDIHVKDAIQRTWQCGTIQLDMFLPERFELEYT 492
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 106 SSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC 165
S F +N + DL L L + F++ E +F H++AH+L +A+ R++
Sbjct: 29 SHYFAGVVINDQIKDLSTTLNEGDTLRFVT-FEDSEGREIFLHTSAHILAQAVLRLWPQA 87
Query: 166 L-CYGPPIENGFYYD 179
+ GP I GFYYD
Sbjct: 88 VPTIGPVINQGFYYD 102
>sp|B8FN26|SYT_DESAA Threonine--tRNA ligase OS=Desulfatibacillum alkenivorans (strain
AK-01) GN=thrS PE=3 SV=1
Length = 636
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/502 (40%), Positives = 276/502 (54%), Gaps = 35/502 (6%)
Query: 213 IQVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTI-IAKDWTRANKSRGNELCESSQYF 271
I +TLPDGKIV + + DVA GIS+G A + + + D + S E S +
Sbjct: 2 INITLPDGKIVESDG-PVSGEDVAKGISEGFARNCVAVEVDGKLTDLSTPIETDASVVFI 60
Query: 272 SLVSTLDFPVMEG----LMKDIVKEKQPFERLEMKKEDLIEMFKYNPFKLRILKE----K 323
+ +M +M + + P +L + +IE Y + + E K
Sbjct: 61 TTKDEQGLDIMRHSAAHVMAEAILNLYPDAKLTIGP--VIEDGFYYDIDMPPISEDDFPK 118
Query: 324 VNTPTTTAYRCGPLIDLCRGPHVRHT-GKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRC 382
+ + + P VR T K +A K N FK ++ E + T + Y
Sbjct: 119 IEQEINKIIKA-------KKPFVRKTLSKAEALDFYKDNAFKTELISE-LEDGTISIYEQ 170
Query: 383 GPLIDLCRGPHN--------------SSTYWEGKADAESLQRVYGISFPDNKQLKEWEKL 428
G DLCRGPH S YW G ++ LQR+YG +F D K+LK + L
Sbjct: 171 GGFTDLCRGPHVPNTGLVKTLKLMKVSGAYWRGDSERPMLQRLYGTAFFDKKELKSYLHL 230
Query: 429 QEEAAKRDHRKIGREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVS 488
EEA KRDHRK+G +LF FHE + G FF +G ++N L+ + R E++K G+ E +
Sbjct: 231 LEEAKKRDHRKLGTALDLFSFHEEAAGMPFFHARGMELWNALLAYWREEHKKAGYVETKT 290
Query: 489 PNVYNVKLWQTSGHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRM 548
P + N LW+ SGHW +Y ENM++ +E+ YA+KPMNCPG L++ + S+ +LP+R
Sbjct: 291 PIMLNKSLWERSGHWENYRENMYTSLIEDFDYAIKPMNCPGGMLLYKTKHHSYNDLPIRA 350
Query: 549 ADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTF 608
+ G++HR+ELSG L+GL RVR F QDDAHIF T E I DEI+G L + +YS FG F
Sbjct: 351 GEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTEEMIEDEILGVLQLVERMYSTFGLGF 410
Query: 609 NLRLSTRPEKYLGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKR 668
+L LSTRPEK +G E W KA + L A+L+ G + N GDGAFYGPKIDI I DAL R
Sbjct: 411 HLELSTRPEKTIGTDEQWEKATEGLRAALDKSGRDYKINEGDGAFYGPKIDIHIKDALGR 470
Query: 669 PHQCATIQLDFQLPIRFNLAYV 690
QC TIQLD LP RF+L YV
Sbjct: 471 TWQCGTIQLDMNLPERFDLTYV 492
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 40/143 (27%)
Query: 39 QVTLPDGKIVPAKSWRTTPYDVAAGISKGLADSTIIAKVNGVLWDLDRPLETNCKLELLN 98
+TLPDGKIV + + DVA GIS+G A + + +V+G L
Sbjct: 3 NITLPDGKIVESDG-PVSGEDVAKGISEGFARNCVAVEVDGKLT---------------- 45
Query: 99 KFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAM 158
DL P+ET+ + + D E+ + HS AHV+ EA+
Sbjct: 46 ---------------------DLSTPIETDASVVFITTKD-EQGLDIMRHSAAHVMAEAI 83
Query: 159 ERVYGGC-LCYGPPIENGFYYDM 180
+Y L GP IE+GFYYD+
Sbjct: 84 LNLYPDAKLTIGPVIEDGFYYDI 106
>sp|Q0AY05|SYT_SYNWW Threonine--tRNA ligase OS=Syntrophomonas wolfei subsp. wolfei
(strain Goettingen) GN=thrS PE=3 SV=1
Length = 635
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 173/415 (41%), Positives = 239/415 (57%), Gaps = 36/415 (8%)
Query: 278 DFPVMEGLMKDIVKEKQPFERLEMKKEDLIEMF--KYNPFKLRILKEKVNTPTTTAYRCG 335
DF +E MK I+K P R E+ +E+ ++ F + +KL ++++ + Y+ G
Sbjct: 116 DFAAIEEEMKRIIKADYPIVRKELSREEALQFFSERSEDYKLELIEDLPEDAVISTYQQG 175
Query: 336 PLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAYRCGPLIDLCRGPHNS 395
+DLC GPH+ TG++KA KV +
Sbjct: 176 EFVDLCAGPHLPSTGRLKAIKVMSL----------------------------------A 201
Query: 396 STYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKIGREQELFFFHELSPG 455
YW G LQRVY SFP L ++ + EEA KRDHR++GRE LF + PG
Sbjct: 202 GAYWRGSERNPMLQRVYATSFPKKSMLDDYLQKLEEAKKRDHRRLGRELGLFVVLDEGPG 261
Query: 456 SCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTSGHWAHYSENMFSFDV 515
FF PKG + N L F R E+RK G+QE+ +P + + +LW+ SGHW HY +NM+ +
Sbjct: 262 FPFFLPKGMVLRNELENFWREEHRKAGYQEIRTPIILSRELWERSGHWDHYKDNMYFTTI 321
Query: 516 ENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQD 575
+ YA+KPMNCPG L++ + S++ELPLRM + G++HR+E+SG L GL RVR F QD
Sbjct: 322 DEGDYAIKPMNCPGGLLVYKQNLHSYKELPLRMGEMGLVHRHEMSGVLHGLMRVRAFTQD 381
Query: 576 DAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEKYLGELEVWNKAEKQLEA 635
DAHIF EQI DEI G +D + YS+FGF +++ LST+PEK +G E+W A L
Sbjct: 382 DAHIFMLPEQIIDEIKGVMDLVDRFYSLFGFPYHVELSTKPEKAMGSDEIWEVATNALIK 441
Query: 636 SLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDFQLPIRFNLAYV 690
+L G + N GDGAFYGPKID + D+L R QC TIQLDFQ+P +F+L YV
Sbjct: 442 ALEERGMEYKVNEGDGAFYGPKIDFHLQDSLDRTWQCGTIQLDFQMPEKFDLTYV 496
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 112 AFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWHSTAHVLGEAMERVYGGC-LCYGP 170
A NG + DL+ ++ + LELL+ F++E A V+ HS+AHV+ +A++R++ L GP
Sbjct: 38 AVFNGKISDLNSQVKEDGCLELLD-FEDERAREVYRHSSAHVMAQAVKRLWPESKLAIGP 96
Query: 171 PIENGFYYD 179
I+ GFYYD
Sbjct: 97 AIDKGFYYD 105
>sp|Q9PJF9|SYT_CHLMU Threonine--tRNA ligase OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=thrS PE=3 SV=1
Length = 635
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 188/491 (38%), Positives = 277/491 (56%), Gaps = 51/491 (10%)
Query: 211 EEIQVTLPDGKIVPAKSW-----RTTPYDVAAGISKGLADSTIIAKDWTRANKSRGNELC 265
+++ TL DG V +W R +A I LA + + + W A + G +
Sbjct: 42 KDLSTTLKDGDTVLFLTWDDPQGREIFLHTSAHI---LAQAVL--RLWPSAQPTIG-PVI 95
Query: 266 ESSQYFSL----VSTLDFPVMEGLMKDIVKEKQPFER-LEMKKEDLIEMFKYNPFKLRIL 320
+ Y+ +S DFP +E + K I +EK R + KE+ + F NPFK+ ++
Sbjct: 96 DQGFYYDFANLSISEEDFPAIEAMAKAIAEEKLAISRQVFSDKEETLAYFSDNPFKIELI 155
Query: 321 KEKVNTPTTTAYRCGPLIDLCRGPHVRHTGKIKAFKVTKYNPFKLRILKEKVNTPTTTAY 380
E T +AY+ G +DLCRGPH+ T +KAFK+ +
Sbjct: 156 TELPEEATISAYKQGEFLDLCRGPHLPSTAPVKAFKLLR--------------------- 194
Query: 381 RCGPLIDLCRGPHNSSTYWEGKADAESLQRVYGISFPDNKQLKEWEKLQEEAAKRDHRKI 440
S+ YW G ESL R+YGI+FP K+LKE EEA KRDHR +
Sbjct: 195 -------------TSAAYWRGDPSKESLIRIYGIAFPTTKELKEHLHQLEEAKKRDHRVL 241
Query: 441 GREQELFFFHELSPGSCFFQPKGAFIYNTLVEFIRSEYRKRGFQEVVSPNVYNVKLWQTS 500
G + +LF S G FF P+G I+N L+++ + ++ G+Q++ +P + + +LW+ S
Sbjct: 242 GTKLDLFSQQSYSAGMPFFHPRGMVIWNALIDYWKRLHQLAGYQQIQTPQLMSRELWEIS 301
Query: 501 GHWAHYSENMFSFDVENETYALKPMNCPGHCLIFDHRVRSWRELPLRMADFGVLHRNELS 560
GHW +Y ENM++ V+ E YA+KPMNCPG L + ++ S+RE PLR+A+ G +HR+ELS
Sbjct: 302 GHWENYKENMYTLTVDEEDYAIKPMNCPGCMLYYKTQLHSYREFPLRIAEIGHVHRHELS 361
Query: 561 GALTGLTRVRRFQQDDAHIFCTVEQIGDEIVGALDFLRNVYSIFGFTFNLRLSTRPEK-Y 619
GAL+GL RVR F QDDAH+F T EQ+ +E + L+ + +Y FG ++L LSTRPE+
Sbjct: 362 GALSGLMRVRTFHQDDAHVFLTPEQVEEETLNILNLVSELYGTFGLDYHLELSTRPEQGT 421
Query: 620 LGELEVWNKAEKQLEASLNSFGEPWTENPGDGAFYGPKIDITITDALKRPHQCATIQLDF 679
+G ++W A + L+ +L +P+ +PG+GAFYGPKIDI + DA+ R QC TIQLD
Sbjct: 422 IGSDDLWELATEALKNALVKSQKPFIISPGEGAFYGPKIDIHVKDAINRTWQCGTIQLDM 481
Query: 680 QLPIRFNLAYV 690
LP RF+L Y
Sbjct: 482 FLPERFDLKYT 492
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 89 ETNCKLELLNKFDNEEASSVFWLAFVNGVLWDLDRPLETNCKLELLNKFDNEEASSVFWH 148
E ++L +K N S F A +N DL L+ + L +D+ + +F H
Sbjct: 15 EGASAMDLASKMKN---SHCFAGALINDQEKDLSTTLKDGDTVLFLT-WDDPQGREIFLH 70
Query: 149 STAHVLGEAMERVYGGCL-CYGPPIENGFYYD 179
++AH+L +A+ R++ GP I+ GFYYD
Sbjct: 71 TSAHILAQAVLRLWPSAQPTIGPVIDQGFYYD 102
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 285,423,570
Number of Sequences: 539616
Number of extensions: 12767828
Number of successful extensions: 36668
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 318
Number of HSP's that attempted gapping in prelim test: 30652
Number of HSP's gapped (non-prelim): 3403
length of query: 715
length of database: 191,569,459
effective HSP length: 125
effective length of query: 590
effective length of database: 124,117,459
effective search space: 73229300810
effective search space used: 73229300810
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)