BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10614
(70 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52713|MMSA_CAEEL Probable methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Caenorhabditis elegans GN=alh-8 PE=1
SV=1
Length = 523
Score = 88.6 bits (218), Expect = 9e-18, Method: Composition-based stats.
Identities = 39/45 (86%), Positives = 41/45 (91%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
MD HSYR+PLGVTAGI PFNFPAMIPLWMFPVA+A GNT VIKPS
Sbjct: 157 MDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPS 201
>sp|Q7QC84|MMSA_ANOGA Probable methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Anopheles gambiae GN=AGAP002499 PE=3
SV=2
Length = 521
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 40/45 (88%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
MD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPS
Sbjct: 154 MDTYSYHLPLGVTAGIAPFNFPAMIPLWMFPVAITCGNTSIIKPS 198
>sp|Q17M80|MMSA_AEDAE Probable methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Aedes aegypti GN=AAEL001134 PE=3 SV=1
Length = 521
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 40/45 (88%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
MD +SY +PLGVTAGI PFNFPAMIPLWMFPVAI CGNT +IKPS
Sbjct: 154 MDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPS 198
>sp|Q54I10|MMSA_DICDI Probable methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Dictyostelium discoideum GN=mmsdh PE=3
SV=1
Length = 528
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 41/45 (91%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+DI+SY PLGV AGITPFNFPAMIPLWMFP+AIACGNT V+KPS
Sbjct: 157 VDIYSYVQPLGVCAGITPFNFPAMIPLWMFPLAIACGNTFVLKPS 201
>sp|Q02253|MMSA_RAT Methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Rattus norvegicus GN=Aldh6a1 PE=1 SV=1
Length = 535
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct: 167 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 211
>sp|Q9EQ20|MMSA_MOUSE Methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Mus musculus GN=Aldh6a1 PE=1 SV=1
Length = 535
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct: 167 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 211
>sp|Q07536|MMSA_BOVIN Methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Bos taurus GN=ALDH6A1 PE=1 SV=1
Length = 537
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct: 169 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 213
>sp|Q02252|MMSA_HUMAN Methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Homo sapiens GN=ALDH6A1 PE=1 SV=2
Length = 535
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
MD++SYR+PLGV AGI PFNFPAMIPLWMFP+A+ CGNT ++KPS
Sbjct: 167 MDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPS 211
>sp|Q5KYK0|IOLA3_GEOKA Methylmalonate semialdehyde dehydrogenase [acylating] 3
OS=Geobacillus kaustophilus (strain HTA426) GN=iolA3
PE=3 SV=2
Length = 484
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 2/46 (4%)
Query: 2 DIHS--YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
DI S YR PLGV AGITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 133 DIESGMYRYPLGVVAGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 178
>sp|Q65IX1|IOLA1_BACLD Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=iolA1 PE=3
SV=1
Length = 484
Score = 79.7 bits (195), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/40 (80%), Positives = 36/40 (90%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R PLGV AGITPFNFP M+PLWMFP+AIACGNT V+KPS
Sbjct: 141 WRYPLGVVAGITPFNFPMMVPLWMFPLAIACGNTFVLKPS 180
>sp|A4IPF5|IOLA2_GEOTN Methylmalonate semialdehyde dehydrogenase [acylating] 2
OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=iolA2 PE=3 SV=2
Length = 483
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR PLGV AGITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 139 YRYPLGVVAGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 178
>sp|A9VMS6|IOLA2_BACWK Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus
weihenstephanensis (strain KBAB4) GN=iolA2 PE=3 SV=2
Length = 483
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV AGITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 139 YRYPIGVIAGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 178
>sp|Q5L025|IOLA1_GEOKA Methylmalonate semialdehyde dehydrogenase [acylating] 1
OS=Geobacillus kaustophilus (strain HTA426) GN=iolA1
PE=3 SV=1
Length = 488
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+D +R PLGV AGITPFNFP M+PLWMFP+AI CGNT V+KPS
Sbjct: 138 IDSEMFRYPLGVVAGITPFNFPMMVPLWMFPLAIVCGNTFVLKPS 182
>sp|Q0WM29|MMSA_ARATH Methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2
SV=2
Length = 607
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 38/45 (84%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+D +S R PLGV AGI PFNFPAMIPLWMFPVA+ CGNT ++KPS
Sbjct: 241 VDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPS 285
>sp|A8FDV4|IOLA_BACP2 Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
pumilus (strain SAFR-032) GN=iolA PE=3 SV=1
Length = 486
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV GITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 141 YRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 180
>sp|A7GPH3|IOLA_BACCN Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
cereus subsp. cytotoxis (strain NVH 391-98) GN=iolA PE=3
SV=1
Length = 486
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R PLGV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPLGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|Q4V1F6|IOLA3_BACCZ Methylmalonate semialdehyde dehydrogenase [acylating] 3 OS=Bacillus
cereus (strain ZK / E33L) GN=iolA3 PE=3 SV=1
Length = 487
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV GITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 141 YRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 180
>sp|Q7KW39|MMSA_DROME Probable methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Drosophila melanogaster GN=CG17896 PE=2
SV=1
Length = 520
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 38/45 (84%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
MD +S +PLGVTAG+ PFNFPAMIPLWMFPVAI GNT ++KPS
Sbjct: 153 MDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVAITTGNTMLLKPS 197
>sp|A0REB5|IOLA2_BACAH Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus
thuringiensis (strain Al Hakam) GN=iolA2 PE=3 SV=2
Length = 487
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV GITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 141 YRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 180
>sp|Q81QB6|IOLA2_BACAN Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus
anthracis GN=iolA2 PE=3 SV=1
Length = 487
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV GITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 141 YRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 180
>sp|Q6HIK3|IOLA2_BACHK Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=iolA2
PE=3 SV=1
Length = 487
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV GITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 141 YRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 180
>sp|Q9KAH5|IOLA_BACHD Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=iolA PE=3 SV=1
Length = 485
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV GITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 142 YRYPIGVVGGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 181
>sp|Q5KYR4|IOLA2_GEOKA Methylmalonate semialdehyde dehydrogenase [acylating] 2
OS=Geobacillus kaustophilus (strain HTA426) GN=iolA2
PE=3 SV=2
Length = 484
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV GITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 140 YRYPIGVVGGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 179
>sp|Q63B74|IOLA2_BACCZ Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus
cereus (strain ZK / E33L) GN=iolA2 PE=3 SV=1
Length = 488
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV GITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 142 YRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 181
>sp|A4IPB2|IOLA1_GEOTN Methylmalonate semialdehyde dehydrogenase [acylating] 1
OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=iolA1 PE=3 SV=2
Length = 484
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV GITPFNFP M+P WMFP+AIACGNT V+KPS
Sbjct: 140 YRYPIGVVGGITPFNFPMMVPCWMFPLAIACGNTFVLKPS 179
>sp|P28810|MMSA_PSEAE Methylmalonate-semialdehyde dehydrogenase [acylating]
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=mmsA PE=1 SV=2
Length = 497
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+D +S PLGV GITPFNFPAMIPLWMFP+AIACGN ++KPS
Sbjct: 132 IDTYSITQPLGVCVGITPFNFPAMIPLWMFPLAIACGNAFILKPS 176
>sp|Q8ES27|IOLA1_OCEIH Methylmalonate semialdehyde dehydrogenase [acylating] 1
OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM
11309 / KCTC 3954 / HTE831) GN=iolA1 PE=3 SV=1
Length = 486
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R PLGV AGITPFNFP M+PLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPLGVVAGITPFNFPMMVPLWMFPLAIACGNTFVLKTS 180
>sp|A9VF06|IOLA1_BACWK Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus
weihenstephanensis (strain KBAB4) GN=iolA1 PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|Q6HJ19|IOLA1_BACHK Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=iolA1
PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|Q81QR5|IOLA1_BACAN Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus
anthracis GN=iolA1 PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|B9IZZ7|IOLA_BACCQ Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
cereus (strain Q1) GN=iolA PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|B7HR31|IOLA_BACC7 Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
cereus (strain AH187) GN=iolA PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|B7H597|IOLA_BACC4 Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
cereus (strain B4264) GN=iolA PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|Q738L2|IOLA_BACC1 Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
cereus (strain ATCC 10987) GN=iolA PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|Q63BL0|IOLA1_BACCZ Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus
cereus (strain ZK / E33L) GN=iolA1 PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|A0RDW1|IOLA1_BACAH Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus
thuringiensis (strain Al Hakam) GN=iolA1 PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|B7IW48|IOLA_BACC2 Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
cereus (strain G9842) GN=iolA PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|Q81DR5|IOLA_BACCR Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
cereus (strain ATCC 14579 / DSM 31) GN=iolA PE=3 SV=1
Length = 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R P+GV AGITPFNFP MIPLWMFP+AIACGNT V+K S
Sbjct: 141 WRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLKTS 180
>sp|Q29HB2|MMSA_DROPS Probable methylmalonate-semialdehyde dehydrogenase [acylating],
mitochondrial OS=Drosophila pseudoobscura pseudoobscura
GN=GA14712 PE=3 SV=1
Length = 520
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 1 MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
MD +S +PLGVTAGI PFNFPAMIPLWMFPVAI GNT ++KPS
Sbjct: 153 MDTYSLVMPLGVTAGIAPFNFPAMIPLWMFPVAITTGNTMLLKPS 197
>sp|Q8EMV4|IOLA2_OCEIH Methylmalonate semialdehyde dehydrogenase [acylating] 2
OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM
11309 / KCTC 3954 / HTE831) GN=iolA2 PE=3 SV=1
Length = 486
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
YR P+GV GITPFNFP M+P WMFP+AIA GNT V+KPS
Sbjct: 141 YRYPIGVIGGITPFNFPMMVPCWMFPMAIATGNTFVMKPS 180
>sp|Q5WH11|IOLA2_BACSK Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus
clausii (strain KSM-K16) GN=iolA2 PE=3 SV=1
Length = 486
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 6 YRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+R PLGV AGITPFNFP M+PLWMFP+AIA GNT V+K S
Sbjct: 141 WRYPLGVVAGITPFNFPMMVPLWMFPLAIAAGNTFVLKTS 180
>sp|A5YBJ3|IOLA_LACCA Methylmalonate semialdehyde dehydrogenase [acylating]
OS=Lactobacillus casei GN=iolA PE=3 SV=1
Length = 492
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+YR P+GV GITPFNFP M+P WMFP+A+A GNT ++KPS
Sbjct: 142 NYRYPIGVVGGITPFNFPMMVPCWMFPMAVATGNTFILKPS 182
>sp|Q65D00|IOLA2_BACLD Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=iolA2 PE=3
SV=1
Length = 487
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+YR P+GV GI PFNFP M+P WMFP+AIA GNT ++KPS
Sbjct: 138 NYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPS 178
>sp|P42412|IOLA_BACSU Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
subtilis (strain 168) GN=iolA PE=1 SV=1
Length = 487
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+YR P+GV GI PFNFP M+P WMFP+AIA GNT ++KPS
Sbjct: 138 NYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPS 178
>sp|A7BJC4|IOLA_BACNA Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus
subtilis subsp. natto GN=iolA PE=3 SV=2
Length = 487
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+YR P+GV GI PFNFP M+P WMFP+AIA GNT ++KPS
Sbjct: 138 NYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPS 178
>sp|Q8Y9Y4|IOLA_LISMO Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=iolA PE=3 SV=1
Length = 488
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+YR P+GV GI PFNFP M+P WMFP+AIA GN+ ++KPS
Sbjct: 138 NYRYPVGVVGGIAPFNFPMMVPCWMFPMAIALGNSFILKPS 178
>sp|B8DCT8|IOLA_LISMH Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria
monocytogenes serotype 4a (strain HCC23) GN=iolA PE=3
SV=1
Length = 488
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+YR P+GV GI PFNFP M+P WMFP+AIA GN+ ++KPS
Sbjct: 138 NYRYPVGVVGGIAPFNFPMMVPCWMFPMAIALGNSFILKPS 178
>sp|Q723T1|IOLA_LISMF Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria
monocytogenes serotype 4b (strain F2365) GN=iolA PE=3
SV=1
Length = 488
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+YR P+GV GI PFNFP M+P WMFP+AIA GN+ ++KPS
Sbjct: 138 NYRYPVGVVGGIAPFNFPMMVPCWMFPMAIALGNSFILKPS 178
>sp|C1KZ99|IOLA_LISMC Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria
monocytogenes serotype 4b (strain CLIP80459) GN=iolA
PE=3 SV=1
Length = 488
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+YR P+GV GI PFNFP M+P WMFP+AIA GN+ ++KPS
Sbjct: 138 NYRYPVGVVGGIAPFNFPMMVPCWMFPMAIALGNSFILKPS 178
>sp|Q92EQ7|IOLA_LISIN Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria
innocua serovar 6a (strain CLIP 11262) GN=iolA PE=3 SV=1
Length = 488
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 5 SYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
+YR P+GV GI PFNFP M+P WMFP+AIA GN+ ++KPS
Sbjct: 138 NYRYPVGVVGGIAPFNFPMMVPCWMFPMAIALGNSFILKPS 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.137 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,679,296
Number of Sequences: 539616
Number of extensions: 837851
Number of successful extensions: 2641
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2020
Number of HSP's gapped (non-prelim): 592
length of query: 70
length of database: 191,569,459
effective HSP length: 42
effective length of query: 28
effective length of database: 168,905,587
effective search space: 4729356436
effective search space used: 4729356436
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)