RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy10614
         (70 letters)



>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
           {Sheep (Ovis aries) [TaxId: 9940]}
          Length = 494

 Score = 53.9 bits (129), Expect = 4e-11
 Identities = 18/45 (40%), Positives = 28/45 (62%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              ++   P+GV   I P+NFP ++ LW    A++CGNT V+KP+
Sbjct: 144 FFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPA 188


>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
           {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
          Length = 494

 Score = 50.4 bits (120), Expect = 8e-10
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              ++   P+GV   I P+NFP ++  W    A+A GN  V+K +
Sbjct: 144 FFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVA 188


>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
           {Baltic cod (Gadus callarias) [TaxId: 8053]}
          Length = 503

 Score = 37.4 bits (86), Expect = 3e-05
 Identities = 22/45 (48%), Positives = 27/45 (60%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
              ++ R PLGV AGI  +N+P MI  W    A+ACGN  V KPS
Sbjct: 147 AFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPS 191


>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW
           {Escherichia coli [TaxId: 562]}
          Length = 474

 Score = 35.2 bits (80), Expect = 2e-04
 Identities = 20/45 (44%), Positives = 25/45 (55%)

Query: 1   MDIHSYRVPLGVTAGITPFNFPAMIPLWMFPVAIACGNTHVIKPS 45
                 R PLGV A I P+N+P M+  W    A+A GN  V+KPS
Sbjct: 130 HTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPS 174


>d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1
          {Human (Homo sapiens) [TaxId: 9606]}
          Length = 401

 Score = 24.4 bits (51), Expect = 1.3
 Identities = 7/31 (22%), Positives = 12/31 (38%)

Query: 10 LGVTAGITPFNFPAMIPLWMFPVAIACGNTH 40
          LG+   +     PA++ +    V    G  H
Sbjct: 28 LGLGENVMERKKPALVSIPEDVVQAEAGGMH 58


>d1ct5a_ c.1.6.2 (A:) "Hypothetical" protein ybl036c {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 244

 Score = 22.2 bits (46), Expect = 8.6
 Identities = 5/12 (41%), Positives = 5/12 (41%)

Query: 30  FPVAIACGNTHV 41
           F  AI  G   V
Sbjct: 225 FREAIRQGTAEV 236


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.137    0.443 

Gapped
Lambda     K      H
   0.267   0.0488    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 270,276
Number of extensions: 9518
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 6
Length of query: 70
Length of database: 2,407,596
Length adjustment: 38
Effective length of query: 32
Effective length of database: 1,885,856
Effective search space: 60347392
Effective search space used: 60347392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.5 bits)