BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10617
(279 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JHP7|KDEL1_MOUSE KDEL motif-containing protein 1 OS=Mus musculus GN=Kdelc1 PE=1 SV=1
Length = 502
Score = 231 bits (590), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 156/263 (59%), Gaps = 53/263 (20%)
Query: 60 VYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAK----SAQYPMFSWCG 115
VY + +G+H GF++FMD +LLSLTRKV +PD+EF+ NLGDWPL K S P+FSWCG
Sbjct: 199 VYIKTHGEHVGFRIFMDAILLSLTRKVRMPDVEFFVNLGDWPLEKKKSNSNIQPIFSWCG 258
Query: 116 SNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLK 175
S E+ DI+MPTYD+T+S LE MGRVSLDM+SVQ N WE K WRGRDS ++RL+
Sbjct: 259 STESRDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWESKNSTAVWRGRDSRKERLE 318
Query: 176 LIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFD----------------- 218
L+ ++R+HP+L +A+ TNFFFFK +E YGP KH+SFF+FF
Sbjct: 319 LVKLSRKHPELIDAAFTNFFFFKHDESLYGPIVKHISFFDFFKHKYQINIDGTVAAYRLP 378
Query: 219 --------------------------------VKEDLSDLVERVRWAQDNEDLVVVMVRN 246
VK +LSDL+E+++WA++++ + +
Sbjct: 379 YLLVGDSVVLKQDSIYYEHFYNELQPWKHYIPVKSNLSDLLEKLKWAKEHDAEAKKIAKA 438
Query: 247 AQILAREKLMPQDILCYHAVLFN 269
Q AR LM DI CY+ LF
Sbjct: 439 GQEFARNNLMGDDIFCYYFKLFQ 461
>sp|Q6UW63|KDEL1_HUMAN KDEL motif-containing protein 1 OS=Homo sapiens GN=KDELC1 PE=1 SV=1
Length = 502
Score = 231 bits (590), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 157/263 (59%), Gaps = 53/263 (20%)
Query: 60 VYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAK----SAQYPMFSWCG 115
VY + +G+H GF++FMD +LLSLTRKV +PD+E + NLGDWPL K S +P+FSWCG
Sbjct: 199 VYIKTHGEHVGFRIFMDAILLSLTRKVKMPDVELFVNLGDWPLEKKKSNSNIHPIFSWCG 258
Query: 116 SNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLK 175
S ++ DI+MPTYD+T+S LE MGRVSLDM+SVQ N WE K WRGRDS ++RL+
Sbjct: 259 STDSKDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWESKNSTAVWRGRDSRKERLE 318
Query: 176 LIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFD----------------- 218
L+ ++R+HP+L +A+ TNFFFFK +E YGP KH+SFF+FF
Sbjct: 319 LVKLSRKHPELIDAAFTNFFFFKHDENLYGPIVKHISFFDFFKHKYQINIDGTVAAYRLP 378
Query: 219 --------------------------------VKEDLSDLVERVRWAQDNEDLVVVMVRN 246
VK +LSDL+E+++WA+D+++ + +
Sbjct: 379 YLLVGDSVVLKQDSIYYEHFYNELQPWKHYIPVKSNLSDLLEKLKWAKDHDEEAKKIAKA 438
Query: 247 AQILAREKLMPQDILCYHAVLFN 269
Q AR LM DI CY+ LF
Sbjct: 439 GQEFARNNLMGDDIFCYYFKLFQ 461
>sp|Q7ZVE6|KDEL1_DANRE KDEL motif-containing protein 1 OS=Danio rerio GN=kdelc1 PE=2 SV=1
Length = 500
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 155/264 (58%), Gaps = 53/264 (20%)
Query: 59 HVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPL----AKSAQYPMFSWC 114
VY + +G+H GF++FMD LLSLTRKV LPD+EF+ NLGDWPL A P+FSWC
Sbjct: 197 QVYIKTHGEHVGFRIFMDAFLLSLTRKVKLPDIEFFVNLGDWPLEKRRASQNPSPVFSWC 256
Query: 115 GSNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRL 174
GSN+T DI+MPTYD+TES LE MGRVSLDM+SVQG+ WE+K K FWRGRDS ++RL
Sbjct: 257 GSNDTRDIVMPTYDLTESVLETMGRVSLDMMSVQGHTGPVWEKKINKGFWRGRDSRKERL 316
Query: 175 KLIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFDVK-------------- 220
+L+ +AR + + +A+LTNFFFFK +E YGP KHVSFF+FF K
Sbjct: 317 ELVKLARANTAMLDAALTNFFFFKHDESLYGPLVKHVSFFDFFKYKYQINVDGTVAAYRL 376
Query: 221 -----------------------------------EDLSDLVERVRWAQDNEDLVVVMVR 245
DLSDL+E+++WA+D+++ +
Sbjct: 377 PYLLAGDSVVFKHDSIYYEHFYNELQPWVHYIPFRSDLSDLLEKIQWAKDHDEEAKKIAL 436
Query: 246 NAQILAREKLMPQDILCYHAVLFN 269
Q AR LM + CY+ LF
Sbjct: 437 AGQQFARTHLMGDSVFCYYHKLFQ 460
>sp|Q7Z4H8|KDEL2_HUMAN KDEL motif-containing protein 2 OS=Homo sapiens GN=KDELC2 PE=1 SV=2
Length = 507
Score = 194 bits (494), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 149/261 (57%), Gaps = 56/261 (21%)
Query: 59 HVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPL------AKSAQYPMFS 112
HVYR+ G++T FKMF D +LLSLTRKV LPDLEF+ NLGDWPL + P+ S
Sbjct: 202 HVYRRSLGKYTDFKMFSDEILLSLTRKVLLPDLEFYVNLGDWPLEHRKVNGTPSPIPIIS 261
Query: 113 WCGSNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRD 172
WCGS ++ D+++PTYDIT S LE M V+ D+LS+QGN W K + F+RGRDS +
Sbjct: 262 WCGSLDSRDVVLPTYDITHSMLEAMRGVTNDLLSIQGNTGPSWINKTERAFFRGRDSREE 321
Query: 173 RLKLIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFF--------------- 217
RL+L+ +++++P L +A +T +FFF+ +E++ G K K + FF+FF
Sbjct: 322 RLQLVQLSKENPQLLDAGITGYFFFQEKEKELG-KAKLMGFFDFFKYKYQVNVDGTVAAY 380
Query: 218 ----------------------------------DVKEDLSDLVERVRWAQDNEDLVVVM 243
+K +LSDL+E+V+WA++N++ +
Sbjct: 381 RYPYLMLGDSLVLKQDSPYYEHFYMALEPWKHYVPIKRNLSDLLEKVKWAKENDEEAKKI 440
Query: 244 VRNAQILAREKLMPQDILCYH 264
+ Q++AR+ L P + CY+
Sbjct: 441 AKEGQLMARDLLQPHRLYCYY 461
>sp|Q566E5|KDEL2_RAT KDEL motif-containing protein 2 OS=Rattus norvegicus GN=Kdelc2 PE=2
SV=1
Length = 508
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 147/261 (56%), Gaps = 56/261 (21%)
Query: 59 HVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLA------KSAQYPMFS 112
H+YR+ G++T FKMF D +LLSL RKV LPDLEF+ NLGDWPL P+ S
Sbjct: 203 HIYRRSLGKYTDFKMFSDEILLSLARKVTLPDLEFYINLGDWPLEHRKVNDTPGPIPIIS 262
Query: 113 WCGSNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRD 172
WCGS ++ DII+PTYD+T S+LE M V+ D+LSVQGN W K K F+RGRDS +
Sbjct: 263 WCGSLDSRDIILPTYDVTHSTLEAMRGVTNDLLSVQGNTGPSWINKTEKAFFRGRDSREE 322
Query: 173 RLKLIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFF--------------- 217
RL+L+ +++++P L +A +T +FFF+ +E++ G K K + FF+FF
Sbjct: 323 RLQLVLLSKENPQLLDAGITGYFFFQEKEKELG-KAKLMGFFDFFKYKYQVNVDGTVAAY 381
Query: 218 ----------------------------------DVKEDLSDLVERVRWAQDNEDLVVVM 243
+K +LSDL+E+V+WA++N++ +
Sbjct: 382 RYPYLMLGDSLVLKQESPYYEHFYVELRPWKHYVPIKRNLSDLLEKVKWAKENDEEAKRI 441
Query: 244 VRNAQILAREKLMPQDILCYH 264
+ Q+ AR+ L P + CY+
Sbjct: 442 AKEGQLTARDLLQPPRLYCYY 462
>sp|B0X1Q4|RUMI_CULQU O-glucosyltransferase rumi homolog OS=Culex quinquefasciatus
GN=CPIJ013394 PE=3 SV=1
Length = 403
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 88 LPDLEFWSNLGDWPL------AKSAQYPMFSWCGSNETFDIIMPTYDITES----SLENM 137
LPD+E N DWP A P+ S+ +N+ DI+ PT+ E SL
Sbjct: 137 LPDMELIINCRDWPQISRHWNASREPLPVLSFSKTNDYLDIMYPTWGFWEGGPAISLYPT 196
Query: 138 GRVSLDMLSVQGNNHKK---WEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTN 193
G D V K WE+K + F+RG ++ +R L+ ++R P+L +A T
Sbjct: 197 GLGRWDQHRVSVRKAAKVWPWEKKLQQAFFRGSRTSDERDPLVLLSRMRPELVDAQYTK 255
>sp|A0NDG6|RUMI_ANOGA O-glucosyltransferase rumi homolog OS=Anopheles gambiae
GN=AGAP004267 PE=3 SV=1
Length = 399
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 90 DLEFWSNLGDWPLA----KSAQYPMFSWCGSNETFDIIMPTYDITESSLE------NMGR 139
D++ N DWP + P+ S+ + E DI+ P + E +GR
Sbjct: 140 DMDLIVNCRDWPQIHRHWSKEKIPVLSFSKTAEYLDIMYPAWAFWEGGPAIALYPTGLGR 199
Query: 140 VSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFFFFKS 199
L ++ + WE KEPK F+RG ++ +R L+ ++R P L +A T +KS
Sbjct: 200 WDLHRQTITKAS-ADWEAKEPKAFFRGSRTSDERDALVLLSRAQPSLVDAQYTKNQAWKS 258
Query: 200 EEE 202
++
Sbjct: 259 PQD 261
>sp|Q8NBL1|PGLT1_HUMAN Protein O-glucosyltransferase 1 OS=Homo sapiens GN=POGLUT1 PE=1
SV=1
Length = 392
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 65/239 (27%)
Query: 88 LPDLEFWSNLGDWPLAK---SAQYPMFSWCGSNETFDIIMPTYDITESSLE-------NM 137
LPD+E N+ D+P P+FS+ ++E DI+ P + E +
Sbjct: 122 LPDMEMVINVRDYPQVPKWMEPAIPVFSFSKTSEYHDIMYPAWTFWEGGPAVWPIYPTGL 181
Query: 138 GRVSL---DMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNF 194
GR L D+ V+ W++K ++RG ++ +R LI ++R++P L +A T
Sbjct: 182 GRWDLFREDL--VRSAAQWPWKKKNSTAYFRGSRTSPERDPLILLSRKNPKLVDAEYTKN 239
Query: 195 FFFKSEEEKYG-PKTKHV--------------------------------------SFFE 215
+KS ++ G P K V + E
Sbjct: 240 QAWKSMKDTLGKPAAKDVHLVDHCKYKYLFNFRGVAASFRFKHLFLCGSLVFHVGDEWLE 299
Query: 216 FF-----------DVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCY 263
FF VK DLS++ E +++ + N+D+ + R L DI CY
Sbjct: 300 FFYPQLKPWVHYIPVKTDLSNVQELLQFVKANDDVAQEIAERGSQFIRNHLQMDDITCY 358
>sp|Q8BYB9|PGLT1_MOUSE Protein O-glucosyltransferase 1 OS=Mus musculus GN=Poglut1 PE=2
SV=2
Length = 392
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 65/239 (27%)
Query: 88 LPDLEFWSNLGDWPLAKS---AQYPMFSWCGSNETFDIIMPTYDITESSLE-------NM 137
LPD+E N+ D+P P+FS+ ++E DI+ P + E +
Sbjct: 122 LPDMEMVINVRDYPQVPKWMEPTIPVFSFSKTSEYHDIMYPAWTFWEGGPAVWPLYPTGL 181
Query: 138 GRVSL---DMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNF 194
GR L D+L + WE+K ++RG ++ +R LI ++R++P L +A T
Sbjct: 182 GRWDLFREDLL--RSAAQWPWEKKNSTAYFRGSRTSPERDPLILLSRKNPKLVDAEYTKN 239
Query: 195 FFFKSEEEKYG-PKTKHV--------------------------------------SFFE 215
+KS ++ G P K V + E
Sbjct: 240 QAWKSMKDTLGKPAAKDVHLIDHCKYRYLFNFRGVAASFRFKHLFLCGSLVFHVGDEWVE 299
Query: 216 FF-----------DVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCY 263
FF VK DLS++ E +++ + N+D+ + + L DI CY
Sbjct: 300 FFYPQLKPWVHYIPVKTDLSNVQELLQFVKANDDIAQEIAKRGSQFIINHLQMDDITCY 358
>sp|Q5E9Q1|PGLT1_BOVIN Protein O-glucosyltransferase 1 OS=Bos taurus GN=POGLUT1 PE=2 SV=1
Length = 392
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 88 LPDLEFWSNLGDWPLAKS---AQYPMFSWCGSNETFDIIMPTYDITESS-----LENMGR 139
LPD+E N+ D+P P+FS+ + E DI+ P + E + MG
Sbjct: 122 LPDMEMVINVRDYPQVPKWMEPAIPIFSFSKTLEYHDIMYPAWTFWEGGPAVWPIYPMGL 181
Query: 140 VSLDMLS---VQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFFF 196
D+ V+ W++K ++RG ++ +R LI ++R++P L +A T
Sbjct: 182 GRWDLFREDLVRSAAQWPWKKKNSTAYFRGSRTSPERDPLILLSRKNPKLVDAEYTKNQA 241
Query: 197 FKSEEEKYG-PKTKHV 211
+KS ++ G P K V
Sbjct: 242 WKSMKDTLGKPAAKDV 257
>sp|Q29AU6|RUMI_DROPS O-glucosyltransferase rumi OS=Drosophila pseudoobscura
pseudoobscura GN=rumi PE=3 SV=1
Length = 409
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 30/191 (15%)
Query: 36 VRYKLYEVCYSFNIVIISKEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWS 95
RYK+YE + +E+ +C G +++ LL L LPD++
Sbjct: 103 TRYKIYEK-------RLYREENCMFPARCQG--------IEHFLLPLV--ATLPDMDLVI 145
Query: 96 NLGDWPL-----AKSAQYPMFSWCGSNETFDIIMPTY------DITESSLENMGRVSLDM 144
N D+P AQ P+ S+ + + DI+ P + T+ +GR L
Sbjct: 146 NTRDYPQINMAWGNGAQGPILSFSKTKDHRDIMYPAWTFWAGGPATKLHPRGIGRWDLMR 205
Query: 145 LSVQGNNHK-KWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFFFFKSEEEK 203
++ W QK F+RG ++ +R LI ++R++P+L A T +KS ++
Sbjct: 206 EKLEKRAAAIPWSQKRELGFFRGSRTSDERDSLILLSRRNPELVEAQYTKNQGWKSPKDT 265
Query: 204 Y-GPKTKHVSF 213
P VSF
Sbjct: 266 LDAPPAGEVSF 276
>sp|Q16QY8|RUMI_AEDAE O-glucosyltransferase rumi homolog OS=Aedes aegypti GN=AAEL011121
PE=3 SV=1
Length = 402
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 87 HLPDLEFWSNLGDWPLA----KSAQYPMFSWCGSNETFDIIMPTYDITESSLE------N 136
HLPD+E N DWP K + P+ S+ +++ DI+ PT+ E
Sbjct: 137 HLPDMELIINCRDWPQINRHWKQEKLPVLSFSKTDDYLDIMYPTWGFWEGGPAISLYPTG 196
Query: 137 MGRVSLDMLSV-QGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFF 195
+GR +S+ + + KWE+K+ K F+RG ++ +R L+ ++R+ P+L +A T
Sbjct: 197 LGRWDQHRVSIKKAADSWKWEKKKAKAFFRGSRTSDERDPLVLLSRRKPELVDAQYTKNQ 256
Query: 196 FFKSEEEKYGPK 207
+KS ++ K
Sbjct: 257 AWKSPKDTLNAK 268
>sp|Q8T045|RUMI_DROME O-glucosyltransferase rumi OS=Drosophila melanogaster GN=rumi PE=1
SV=1
Length = 411
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 75 MDNLLLSLTRKVHLPDLEFWSNLGDWPL-----AKSAQYPMFSWCGSNETFDIIMPTYDI 129
+++ LL L LPD++ N D+P +A P+FS+ + E DI+ P +
Sbjct: 129 IEHFLLPLV--ATLPDMDLIINTRDYPQLNAAWGNAAGGPVFSFSKTKEYRDIMYPAWTF 186
Query: 130 ----TESSLENMGRVSLDMLSVQGNNHKK---WEQKEPKVFWRGRDSNRDRLKLIDIARQ 182
+ L G D + + W QK F+RG ++ +R LI ++R+
Sbjct: 187 WAGGPATKLHPRGIGRWDQMREKLEKRAAAIPWSQKRSLGFFRGSRTSDERDSLILLSRR 246
Query: 183 HPDLFNASLTNFFFFKSEEEKY-GPKTKHVSF 213
+P+L A T +KS ++ P VSF
Sbjct: 247 NPELVEAQYTKNQGWKSPKDTLDAPAADEVSF 278
>sp|Q197C5|VF179_IIV3 Uncharacterized protein 035R OS=Invertebrate iridescent virus 3
GN=IIV3-035R PE=4 SV=1
Length = 1098
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 45/158 (28%)
Query: 75 MDNLLLSLTRKVHLPDLEFWSNLGDWPLAK-----------------SAQY------PMF 111
+ ++LL L K H+ D++F+ N D+PL QY P+
Sbjct: 201 IKSMLLELVEKRHISDVKFFINRRDFPLLTRDGTEAYDNIFGDETPVPEQYRHRKWLPIL 260
Query: 112 SWCGSNETFDIIMPTYDITESSLENMGRVSLD---MLSVQGNNHK-----KWEQKEPKVF 163
S C S DI +PT+ E+ RV D N+ W K K
Sbjct: 261 SMCTSERFADIAIPTH-------EDWSRVKSDEGIYFPPVCRNYTFQFVHTWSDKVAKAV 313
Query: 164 WRGR-------DSNRDRLKLIDIARQHPDLFNASLTNF 194
+RG ++N RLKL + PDL +A +TN+
Sbjct: 314 FRGSNTGCGWNETNNVRLKLARLGTVRPDLLDAGITNW 351
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 216 FFDVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDIL 261
+ V+ DLSDL +R+ W + N+ M NA R L + IL
Sbjct: 434 YVPVRPDLSDLFDRIEWCRANDAQCRAMAENAYQFYRTHLDKESIL 479
>sp|Q5G5C4|RS3A_PERAM 40S ribosomal protein S3a OS=Periplaneta americana GN=Parcxpwex01
PE=2 SV=1
Length = 263
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSR--------QCRIWTNV-LHTTDGVIIVRYKLYEVCYSFNIVIISK 54
N++ HG+D+ + Q I NV + TTDG Y L C F +
Sbjct: 98 NVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDG-----YLLRVFCIGF-----TN 147
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+DQ + CY QHT + ++ +TR V DL+
Sbjct: 148 KDQMSQRKTCYAQHTQVRAIRKKMVEIITRDVTSSDLK 185
>sp|Q6GZU9|027R_FRG3G Uncharacterized protein 027R OS=Frog virus 3 (isolate Goorha)
GN=FV3-027R PE=4 SV=1
Length = 970
Score = 36.2 bits (82), Expect = 0.27, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 35/161 (21%)
Query: 79 LLSLTRKVHLPDLEFWSNLGDWPLAK------------------------SAQYPMFSWC 114
L +L + +PD +F N+ D+PL + P+ S C
Sbjct: 144 LEALQDERDVPDCDFILNVRDYPLLRRDGTRPYPQVYGKGRRLPEPWARGGPHVPVVSMC 203
Query: 115 GSNETFDIIMPTYDITESSLENMGRV----SLDMLSVQGNNHKKWEQKEPKVFWRGRDS- 169
DI +PTY+ + + GR + + ++ W ++ +RG +
Sbjct: 204 SGPTYADIAVPTYECIAHAYTSSGRTLPAGGRFVKTPSADSLPAWRDRKALAVFRGSSTG 263
Query: 170 ------NRDRLKLIDIARQHPDLFNASLTNFFFFKSEEEKY 204
+ RL+ + I+ PDL + +T + + E+Y
Sbjct: 264 AGTSTEDNQRLRALQISMSRPDLADVGITKWNLRPRKTERY 304
>sp|O55767|VF179_IIV6 Uncharacterized protein 179R OS=Invertebrate iridescent virus 6
GN=IIV6-179R PE=4 SV=1
Length = 1186
Score = 35.0 bits (79), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 213 FFEFFDVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCY 263
+ + VK DLSDL+E+++W +DN++ + + A + L + IL Y
Sbjct: 463 YIHYVPVKSDLSDLIEKIQWCRDNDEKCKEISQEALKFYQTYLSRESILDY 513
>sp|A6YPJ8|RS3A_TRIIF 40S ribosomal protein S3a OS=Triatoma infestans PE=2 SV=1
Length = 262
Score = 34.7 bits (78), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 19/102 (18%)
Query: 4 NIVVRVHGLDINGSR--------QCRIWTNV-LHTTDGVIIVRYKLYEVCYSFNIVIISK 54
N++ HG+D+ + Q I NV + TTDG Y L C F +
Sbjct: 98 NVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVRTTDG-----YLLRVFCIGF-----TN 147
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSN 96
+DQ + CY QHT + ++ ++T + DL N
Sbjct: 148 KDQLSQRKTCYAQHTQVRQIRRKMVDNITSSISNSDLRVVVN 189
>sp|Q6EV04|RS3A_BIPLU 40S ribosomal protein S3a OS=Biphyllus lunatus PE=2 SV=1
Length = 267
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSR---QCRIWTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N++ HG+D+ + + W +++ TTDG Y L C F +
Sbjct: 98 NVLTNFHGMDLTTDKLRSMVKKWQSLIEASADVKTTDG-----YLLRVFCIGF-----TN 147
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+DQ + CY QHT + ++ +TR + DL+
Sbjct: 148 KDQLSQRKTCYAQHTQVRSIRKKMVEIITRDISGSDLK 185
>sp|B0WN96|RS3A_CULQU 40S ribosomal protein S3a OS=Culex quinquefasciatus GN=CPIJ008584
PE=3 SV=2
Length = 270
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 9/93 (9%)
Query: 4 NIVVRVHGLDINGSR---QCRIWTNVLH-TTDGVIIVRYKLYEVCYSFNIVIISKEDQTH 59
N++ HG+D+ + + W ++ + D Y L C F I +DQ
Sbjct: 98 NVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDNYLLRVFCIGFTI-----KDQVS 152
Query: 60 VYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ CY QH+ K N+ +T V DL+
Sbjct: 153 QRKTCYAQHSQIKAIRKNMTQIITNNVTSSDLK 185
>sp|O73813|RS3A_ORYLA 40S ribosomal protein S3a OS=Oryzias latipes GN=rps3a PE=2 SV=3
Length = 266
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ V + Y QH + ++ +TR+V DL+
Sbjct: 145 KRNNQVRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|Q1HRR3|RS3A_AEDAE 40S ribosomal protein S3a OS=Aedes aegypti GN=AAEL005901 PE=2 SV=1
Length = 270
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSR---QCRIWTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N++ HG+D+ + + W ++ TTDG Y L C F I
Sbjct: 98 NVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDG-----YLLRVFCIGFTI----- 147
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+D + CY QH+ K + +TR V DL+
Sbjct: 148 KDSVSQRKTCYAQHSQIKEIRRKMTTIITRDVTSSDLK 185
>sp|Q9CNY2|TILS_PASMU tRNA(Ile)-lysidine synthase OS=Pasteurella multocida (strain Pm70)
GN=tilS PE=3 SV=1
Length = 431
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Query: 79 LLSLTRKVHLPD-LEFWSNLGDWPLAKSAQYPMFSWCGSNETFDIIMP-TYDITESSLEN 136
L SL +H+ + L +LG L + A W TF I+P T D E
Sbjct: 321 LSSLRLPIHIGETLTLPDHLGTLSLQQQAGQLQVIWSHPQHTFTSILPLTEDPIEVRFRY 380
Query: 137 MGRVSLDMLSVQGNNHKKWEQKEPKVFWRGR 167
G+V L S + K W+Q V+ R R
Sbjct: 381 SGKVRLSPTSANKDIKKLWQQHAVPVWLRQR 411
>sp|Q98TX2|RS3A_OPHHA 40S ribosomal protein S3a OS=Ophiophagus hannah GN=RPS3A PE=2 SV=3
Length = 264
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 19/99 (19%)
Query: 3 NNIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIIS 53
N ++ HG+D+ + C + W ++ TTDG Y L C F +
Sbjct: 94 KNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDG-----YLLRLFCVGF-----T 143
Query: 54 KEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
K+ + + Y QH + ++ +TR+V DL+
Sbjct: 144 KKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLK 182
>sp|P61246|RS3A_FELCA 40S ribosomal protein S3a (Fragment) OS=Felis catus GN=RPS3A PE=2
SV=1
Length = 260
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 91 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 140
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + + Y QH + ++ +TR+V DL+
Sbjct: 141 KRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 178
>sp|P61247|RS3A_HUMAN 40S ribosomal protein S3a OS=Homo sapiens GN=RPS3A PE=1 SV=2
Length = 264
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + + Y QH + ++ +TR+V DL+
Sbjct: 145 KRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|Q56JV9|RS3A_BOVIN 40S ribosomal protein S3a OS=Bos taurus GN=RPS3A PE=2 SV=3
Length = 264
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + + Y QH + ++ +TR+V DL+
Sbjct: 145 KRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|P97351|RS3A_MOUSE 40S ribosomal protein S3a OS=Mus musculus GN=Rps3a PE=1 SV=3
Length = 264
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + + Y QH + ++ +TR+V DL+
Sbjct: 145 KRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|Q6DV02|RS3A_GECJA 40S ribosomal protein S3a OS=Gecko japonicus GN=RPS3A PE=2 SV=3
Length = 264
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + + Y QH + ++ +TR+V DL+
Sbjct: 145 KRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|Q6PBY1|RS3A_DANRE 40S ribosomal protein S3a OS=Danio rerio GN=rps3a PE=2 SV=3
Length = 267
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 19/99 (19%)
Query: 3 NNIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIIS 53
N + HG+D+ + C + W ++ TTDG Y L C F +
Sbjct: 94 KNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----T 143
Query: 54 KEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
K+ + + Y QH + ++ +TR+V DL+
Sbjct: 144 KKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|Q4R4Z6|RS3A_MACFA 40S ribosomal protein S3a OS=Macaca fascicularis GN=RPS3A PE=2 SV=3
Length = 264
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + + Y QH + ++ +TR+V DL+
Sbjct: 145 KRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|P49242|RS3A_RAT 40S ribosomal protein S3a OS=Rattus norvegicus GN=Rps3a PE=1 SV=2
Length = 264
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + + Y QH + ++ +TR+V DL+
Sbjct: 145 KRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|Q642T2|RS3A_XENTR 40S ribosomal protein S3a OS=Xenopus tropicalis GN=rps3a PE=2 SV=3
Length = 264
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + + Y QH + ++ +TR+V DL+
Sbjct: 145 KRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|B5FZS9|RS3A_TAEGU 40S ribosomal protein S3a OS=Taeniopygia guttata GN=RPS3A PE=2 SV=1
Length = 264
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + + Y QH + ++ +TR+V DL+
Sbjct: 145 KRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|B5DGL6|RS3A_SALSA 40S ribosomal protein S3a OS=Salmo salar GN=rps3a PE=2 SV=1
Length = 266
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 19/99 (19%)
Query: 3 NNIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIIS 53
N + HG+D+ + C + W ++ TTDG Y L C F +
Sbjct: 94 KNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----T 143
Query: 54 KEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
K+ + + Y QH + ++ +TR+V DL+
Sbjct: 144 KKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|A2Q0R8|RS3A_SOLSE 40S ribosomal protein S3a OS=Solea senegalensis GN=rps3a PE=2 SV=1
Length = 266
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 19/99 (19%)
Query: 3 NNIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIIS 53
N + HG+D+ + C + W ++ TTDG Y L C F +
Sbjct: 94 KNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----T 143
Query: 54 KEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
K+ + + Y QH + ++ +TR+V DL+
Sbjct: 144 KKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|Q87LD0|RAPA_VIBPA RNA polymerase-associated protein RapA OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=rapA PE=3 SV=1
Length = 969
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 36/141 (25%)
Query: 143 DMLSVQGNNHKKWEQKEPKVFWR----------------------GRDSNRDRLKLIDIA 180
D+L V +H +W Q +P ++ GR+S+ RL+L+D
Sbjct: 275 DLLVVDEAHHLEWSQDKPSREYQVVEGLAERTPGVLLLTATPEQLGRESHFARLRLLD-- 332
Query: 181 RQHPDLFNASLTNFFFFKSEEEKYGPKTKHV-SFFEFFDVKEDLSDLVERVRWAQDNEDL 239
PD F ++ F EEE+Y P + S F + ++ + + + QD E L
Sbjct: 333 ---PDRF----YDYEAFVEEEEQYAPVADAITSLFSGEKLPDEAKNQITELLSEQDVEPL 385
Query: 240 VVVMVRN----AQILAREKLM 256
++ N A+ AR++L+
Sbjct: 386 FRIIESNSDEEAKASARQELI 406
>sp|Q4T8S6|RS3A_TETNG 40S ribosomal protein S3a OS=Tetraodon nigroviridis GN=rps3a PE=3
SV=3
Length = 266
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + Y QH + ++ +TR+V DL+
Sbjct: 145 RRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLK 182
>sp|Q801S3|RS3AA_XENLA 40S ribosomal protein S3a-A OS=Xenopus laevis GN=rps3a-a PE=2 SV=3
Length = 264
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 19/98 (19%)
Query: 4 NIVVRVHGLDINGSRQCRI---WTNVLH------TTDGVIIVRYKLYEVCYSFNIVIISK 54
N + HG+D+ + C + W ++ TTDG Y L C F +K
Sbjct: 95 NCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDG-----YLLRLFCVGF-----TK 144
Query: 55 EDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLE 92
+ + + Y QH + + +TR+V DL+
Sbjct: 145 KRNNQIRKTSYAQHQQVRQIRKKMFEIMTREVQTNDLK 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,449,854
Number of Sequences: 539616
Number of extensions: 4309590
Number of successful extensions: 11923
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 11874
Number of HSP's gapped (non-prelim): 59
length of query: 279
length of database: 191,569,459
effective HSP length: 116
effective length of query: 163
effective length of database: 128,974,003
effective search space: 21022762489
effective search space used: 21022762489
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)