Query psy10617
Match_columns 279
No_of_seqs 203 out of 521
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 22:55:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10617.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10617hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2di7_A BK158_1; beta-sandwich, 98.7 6.5E-09 2.2E-13 84.0 3.6 53 3-55 48-106 (124)
2 2w0p_A Filamin-A; alternative 95.2 0.012 4E-07 44.3 3.2 38 17-55 41-78 (94)
3 2bp3_A Filamin A; structural p 94.5 0.021 7.3E-07 43.0 3.0 37 18-55 45-81 (97)
4 2ee6_A Filamin-B; beta-sandwic 94.1 0.031 1.1E-06 42.8 3.2 38 17-55 49-86 (105)
5 3rgh_A Filamin-A; cell adhesio 94.1 0.056 1.9E-06 41.1 4.5 35 20-55 51-85 (100)
6 2di8_A Filamin-B; beta-sandwic 94.1 0.027 9.2E-07 43.8 2.7 44 11-55 43-86 (111)
7 2dic_A Filamin-B; beta-sandwic 93.9 0.03 1E-06 42.9 2.7 45 10-55 42-86 (105)
8 2di9_A Filamin-B; beta-sandwic 93.6 0.064 2.2E-06 42.8 4.3 43 12-55 64-106 (131)
9 2k9u_A Gamma filamin; cytoskel 93.3 0.052 1.8E-06 42.5 3.2 36 19-55 58-93 (119)
10 3cnk_A Filamin-A; FLNA24, X-RA 93.2 0.12 4.1E-06 38.1 4.9 33 22-55 44-76 (89)
11 2dia_A Filamin-B; beta-sandwic 92.3 0.14 4.7E-06 39.6 4.3 35 20-55 54-88 (113)
12 2dmb_A Filamin-B; beta-sandwic 92.0 0.13 4.6E-06 40.6 4.0 35 20-55 55-89 (124)
13 2d7o_A Filamin-C; beta-sandwic 91.6 0.049 1.7E-06 42.2 0.9 36 19-55 51-86 (111)
14 2dj4_A Filamin-B; beta-sandwic 91.1 0.19 6.4E-06 38.6 3.9 35 20-55 55-89 (108)
15 2ds4_A Tripartite motif protei 91.1 0.26 8.8E-06 37.5 4.7 36 19-55 62-97 (113)
16 2eea_A Filamin-B; beta-sandwic 90.9 0.15 5.2E-06 39.5 3.2 33 22-55 64-96 (115)
17 2j3s_A Filamin-A; cytoskeleton 90.8 0.16 5.4E-06 45.5 3.6 37 18-55 236-272 (288)
18 2eec_A Filamin-B; beta-sandwic 90.2 0.15 5.3E-06 40.3 2.7 36 18-55 60-95 (125)
19 2k7q_A Filamin-A; IG-like, ABP 89.3 0.27 9.3E-06 41.3 3.7 37 18-55 136-172 (191)
20 1v05_A Filamin C; actin-bindin 89.2 0.41 1.4E-05 35.6 4.3 33 22-55 51-83 (96)
21 2dib_A Filamin-B; beta-sandwic 89.2 0.26 8.8E-06 38.8 3.3 35 20-55 69-103 (128)
22 2e9j_A Filamin-B; beta-sandwic 88.4 0.26 9E-06 38.4 2.8 35 20-55 66-100 (119)
23 2j3s_A Filamin-A; cytoskeleton 88.0 0.33 1.1E-05 43.4 3.6 45 10-55 37-81 (288)
24 2d7m_A Filamin-C; beta-sandwic 87.7 0.48 1.7E-05 36.5 3.9 34 21-55 57-90 (115)
25 1wlh_A Gelation factor; ABP-12 86.9 0.28 9.6E-06 44.1 2.4 51 4-55 37-87 (311)
26 3okp_A GDP-mannose-dependent a 84.7 1.4 4.6E-05 39.3 5.8 54 221-274 329-382 (394)
27 2k7p_A Filamin-A; IG-like, ABP 84.4 0.69 2.4E-05 38.8 3.5 34 21-55 139-172 (188)
28 2jjm_A Glycosyl transferase, g 84.3 2.1 7.2E-05 38.5 7.0 54 221-274 335-388 (394)
29 2iw1_A Lipopolysaccharide core 83.2 1.7 5.7E-05 38.4 5.7 50 222-272 323-372 (374)
30 2nqc_A Filamin-C; immunoglobul 83.1 0.78 2.7E-05 37.0 3.1 44 10-55 76-119 (138)
31 2gek_A Phosphatidylinositol ma 76.2 4.9 0.00017 35.8 6.5 53 221-274 334-386 (406)
32 2x6q_A Trehalose-synthase TRET 75.7 4.4 0.00015 36.6 6.1 51 219-270 363-413 (416)
33 3oy2_A Glycosyltransferase B73 74.3 4.6 0.00016 36.4 5.8 51 221-272 341-391 (413)
34 2r60_A Glycosyl transferase, g 73.4 7.2 0.00025 36.3 7.1 53 221-273 409-461 (499)
35 1qfh_A Protein (gelation facto 73.1 2.8 9.5E-05 35.4 3.8 35 20-55 56-90 (212)
36 3c48_A Predicted glycosyltrans 71.2 7.9 0.00027 35.0 6.7 51 221-272 376-426 (438)
37 3qhp_A Type 1 capsular polysac 70.9 5.7 0.0002 30.8 5.0 38 220-258 124-161 (166)
38 2bfw_A GLGA glycogen synthase; 61.8 10 0.00036 30.2 4.9 33 221-253 165-198 (200)
39 3fro_A GLGA glycogen synthase; 54.7 13 0.00046 33.1 4.9 49 221-270 380-429 (439)
40 3s28_A Sucrose synthase 1; gly 47.3 37 0.0013 34.8 7.2 51 222-272 716-770 (816)
41 1wlh_A Gelation factor; ABP-12 46.9 14 0.00047 32.8 3.5 34 21-55 156-189 (311)
42 2vsy_A XCC0866; transferase, g 41.8 38 0.0013 31.8 6.0 51 219-269 505-557 (568)
43 1qfh_A Protein (gelation facto 38.8 41 0.0014 28.0 5.1 34 21-55 147-180 (212)
44 2dt7_B Splicing factor 3 subun 38.4 31 0.0011 25.2 3.7 36 238-273 37-85 (85)
45 1h9o_A Phosphatidylinositol 3- 36.3 27 0.00092 26.2 3.2 26 28-55 28-53 (112)
46 2dt6_A Splicing factor 3 subun 32.7 37 0.0013 23.2 3.2 39 238-276 9-60 (64)
47 2d7n_A Filamin-C; beta-sandwic 29.2 62 0.0021 23.7 4.1 34 21-55 35-68 (93)
48 1f0k_A MURG, UDP-N-acetylgluco 28.3 58 0.002 28.2 4.5 49 223-277 312-360 (364)
49 2ge9_A Tyrosine-protein kinase 28.1 61 0.0021 24.8 4.1 23 30-54 32-54 (125)
50 2auh_B Growth factor receptor- 26.5 42 0.0014 22.9 2.4 19 234-252 29-48 (59)
51 2qzs_A Glycogen synthase; glyc 25.9 1.1E+02 0.0036 27.9 6.0 46 222-270 427-475 (485)
52 2kvs_A Uncharacterized protein 25.9 35 0.0012 24.9 2.1 32 224-255 40-73 (80)
53 3s9k_A Tyrosine-protein kinase 25.7 76 0.0026 23.5 4.2 23 30-54 30-52 (118)
54 3otg_A CALG1; calicheamicin, T 25.4 64 0.0022 28.6 4.3 46 222-268 362-407 (412)
55 2cr4_A 3BP-2, SH3 domain-bindi 25.2 52 0.0018 25.4 3.2 24 29-54 42-65 (126)
56 2ekx_A Cytoplasmic tyrosine-pr 24.8 61 0.0021 23.9 3.4 23 30-54 32-54 (110)
57 3beo_A UDP-N-acetylglucosamine 24.3 8.9 0.00031 33.7 -1.7 33 219-251 325-357 (375)
58 4esw_A Pyrimidine biosynthesis 23.2 55 0.0019 28.8 3.4 24 223-246 224-247 (342)
59 1rzu_A Glycogen synthase 1; gl 22.7 1E+02 0.0035 28.0 5.3 46 222-270 426-474 (485)
60 2eob_A 1-phosphatidylinositol- 21.8 59 0.002 24.8 2.9 24 30-55 40-63 (124)
61 1uqt_A Alpha, alpha-trehalose- 21.5 2.1E+02 0.0072 26.9 7.3 50 221-274 404-454 (482)
62 2ee9_A Filamin-B; beta-sandwic 21.4 96 0.0033 22.9 3.9 33 22-55 44-76 (95)
63 2dm0_A Tyrosine-protein kinase 21.3 75 0.0026 24.1 3.4 23 30-54 37-59 (125)
64 2f9f_A First mannosyl transfer 21.1 42 0.0014 26.3 2.0 32 219-250 145-177 (177)
No 1
>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.71 E-value=6.5e-09 Score=84.04 Aligned_cols=53 Identities=23% Similarity=0.323 Sum_probs=44.6
Q ss_pred ccceeeeccccc------CCCCceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 3 NNIVVRVHGLDI------NGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 3 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+|+|.+.|+..+ +..+.||||++++|++||||++|||++.++.+++|+|++++
T Consensus 48 ~~~t~g~g~~~f~V~I~~~~~~~~~i~~~v~Dn~DGsy~v~Yr~~~~~g~~~I~V~~~~ 106 (124)
T 2di7_A 48 NKFTSSPGEKVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYRMYASYKNLKVEIKFQG 106 (124)
T ss_dssp CBCCSCCCSSCCEEEEECSSCCCCCCCCEEECCSSSCCEEECCCCSCCSCCEEEEESSS
T ss_pred CEeeeCCCCCceEEEEecCCCCceEeeeEEEECCCCeEEEEEECCCCCCCEEEEEEECC
Confidence 467776543332 55677999999999999999999999999999999999986
No 2
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=95.23 E-value=0.012 Score=44.26 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=31.7
Q ss_pred CCceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 17 SRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 17 ~~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.+..++.+++.|.+||+|.++|+... .....|+|+..+
T Consensus 41 ~gp~~~~~~v~d~~dGty~v~Y~p~~-~G~y~I~V~~~g 78 (94)
T 2w0p_A 41 EGPSKAEISFEDRKDGSCGVAYVVQE-PGDYEVSVKFNE 78 (94)
T ss_dssp EESSCCEEEEEECTTSCEEEEEECSS-CEEEEEEEEETT
T ss_pred ECCCCCeEEEEECCCCEEEEEEEECC-CceEEEEEEECC
Confidence 34556788999999999999999966 577999998865
No 3
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=94.53 E-value=0.021 Score=43.01 Aligned_cols=37 Identities=16% Similarity=0.148 Sum_probs=30.9
Q ss_pred CceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 18 RQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 18 ~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+..++.+++.|.+||+|.++|+... .....|+|+..+
T Consensus 45 ~p~~~~~~v~d~~dGty~v~Y~p~~-~G~y~i~V~~~g 81 (97)
T 2bp3_A 45 GPSKAEISCTDNQDGTCSVSYLPVL-PGDYSILVKYNE 81 (97)
T ss_dssp ESSCCEEEEEECSSSEEEEEEECSS-CEEEEEEEEETT
T ss_pred CCCCCEEEEEECCCCEEEEEEEeCC-CCcEEEEEEECC
Confidence 3445778899999999999999965 678999998875
No 4
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.13 E-value=0.031 Score=42.82 Aligned_cols=38 Identities=13% Similarity=0.083 Sum_probs=31.2
Q ss_pred CCceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 17 SRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 17 ~~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.+..++.+++.|.+||+|.++|+... .....|+|+..+
T Consensus 49 ~~p~~~~v~v~d~~dGty~v~Y~p~~-~G~y~I~V~~~g 86 (105)
T 2ee6_A 49 EGPSKAEITFDDHKNGSCGVSYIAQE-PGNYEVSIKFND 86 (105)
T ss_dssp ESSSCEEEEECCCCSSCCCEEEEESS-CEEEEEEEEETT
T ss_pred ECCCCCEEEEEECCCCEEEEEEEECC-CceEEEEEEECC
Confidence 34455677999999999999999976 577899998865
No 5
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=94.08 E-value=0.056 Score=41.07 Aligned_cols=35 Identities=11% Similarity=0.055 Sum_probs=30.3
Q ss_pred eeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 20 CRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 20 ~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.++.+++.|++||+|.++|+...+ ....|+|++++
T Consensus 51 ~~~~~~v~d~~dGty~V~Y~p~~~-G~y~i~V~~~g 85 (100)
T 3rgh_A 51 LPAEVYIQDHGDGTHTITYIPLCP-GAYTVTIKYGG 85 (100)
T ss_dssp CBCEEEEEECSSSEEEEEEECCSS-EEEEEEEEETT
T ss_pred CEeEEEEEeCCCCEEEEEEEeCCC-eeEEEEEEECC
Confidence 567889999999999999998774 57999999876
No 6
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=94.08 E-value=0.027 Score=43.80 Aligned_cols=44 Identities=11% Similarity=0.062 Sum_probs=34.3
Q ss_pred ccccCCCCceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 11 GLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
++++.-.+..++.+++.|.+||+|.++|+... .....|+|+..+
T Consensus 43 ~l~v~v~gp~~~~~~v~d~~dGty~v~Y~p~~-~G~y~I~V~~~g 86 (111)
T 2di8_A 43 GISLAVEGPSKVDIQTEDLEDGTCKVSYFPTV-PGVYIVSTKFAD 86 (111)
T ss_dssp CEEEEEESSSCCCEECCBCTTSCEEEEECCCS-CSEEEEEEEESS
T ss_pred ceEEEEEcCCCceEEEEECCCCEEEEEEEeCC-CeEEEEEEEECC
Confidence 33443344556778999999999999999955 688999999876
No 7
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=93.89 E-value=0.03 Score=42.91 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=34.6
Q ss_pred cccccCCCCceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 10 HGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
|++++.-.+.+++.+++.|.+||+|.++|+... ....+|+|+..+
T Consensus 42 g~l~v~v~gp~~~~~~v~d~~dGty~v~Y~p~~-~G~y~I~V~~~g 86 (105)
T 2dic_A 42 GGLGITVEGPSESKINCRDNKDGSCSAEYIPFA-PGDYDVNITYGG 86 (105)
T ss_dssp SCEEEEEESSSCCCCEEEECSSSCEEEEECCSS-CEEEEEEEEETT
T ss_pred CceEEEEECCCCCeEEEEECCCCeEEEEEEeCC-CeEEEEEEEECC
Confidence 334444445567788999999999999998755 688999999876
No 8
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=93.64 E-value=0.064 Score=42.81 Aligned_cols=43 Identities=19% Similarity=0.217 Sum_probs=34.1
Q ss_pred cccCCCCceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 12 LDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+++.-.+.+++.+++.|.+||+|.++|+... .....|+|+..+
T Consensus 64 l~v~v~gp~~~~~~v~d~~dGty~v~Y~p~~-~G~y~I~V~~~g 106 (131)
T 2di9_A 64 LGLTVEGPCEAKIECSDNGDGTCSVSYLPTK-PGEYFVNILFEE 106 (131)
T ss_dssp EEEEECSSSCCEEEEEECSSSEEEEEEECSS-SSEEEEEEEESS
T ss_pred eEEEEEecCCceEEEEECCCCEEEEEEEeCC-CeeEEEEEEECC
Confidence 3333345566788999999999999999965 688999998876
No 9
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=93.34 E-value=0.052 Score=42.52 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=30.5
Q ss_pred ceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 19 QCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 19 ~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
..++.+++.|.+||+|.++|+... .....|+|+..+
T Consensus 58 p~~~~~~v~d~~dGty~v~Y~p~~-~G~y~I~V~~~g 93 (119)
T 2k9u_A 58 PSKAEIAFEDRKDGSCGVSYVVQE-PGDYEVSIKFND 93 (119)
T ss_dssp SSCCEEEEECCSSSEEEEEEECCS-SEEEEEEEEETS
T ss_pred CCCCeEEEEECCCCEEEEEEEECC-CceEEEEEEECC
Confidence 344778899999999999999966 688999999876
No 10
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=93.20 E-value=0.12 Score=38.07 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=28.6
Q ss_pred EEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 22 IWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 22 ~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+.+++.|.+||+|.++|+... .....|+|+.++
T Consensus 44 ~~~~v~d~~dGty~v~Y~p~~-~G~y~i~V~~~g 76 (89)
T 3cnk_A 44 EEILVKHVGSRLYSVSYLLKD-KGEYTLVVKWGH 76 (89)
T ss_dssp SEEEEEEEETTEEEEEEECCS-CEEEEEEEEETT
T ss_pred eeEEEEECCCCEEEEEEEECC-CccEEEEEEECC
Confidence 677899999999999999997 455899998876
No 11
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.30 E-value=0.14 Score=39.60 Aligned_cols=35 Identities=11% Similarity=0.174 Sum_probs=30.7
Q ss_pred eeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 20 CRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 20 ~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.++.+++.|.+||+|.++|+... ....+|+|++++
T Consensus 54 ~~~~~~v~d~~dGty~v~Y~p~~-~G~y~i~V~~~g 88 (113)
T 2dia_A 54 TKAEVSIQNNKDGTYAVTYVPLT-AGMYTLTMKYGG 88 (113)
T ss_dssp EECEEEEEECTTSEEEEEEECSS-CEEEEEEEEETT
T ss_pred CEeeEEEEECCCCEEEEEEEeCC-CccEEEEEEECC
Confidence 68888999999999999999966 556999999876
No 12
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.01 E-value=0.13 Score=40.61 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=30.2
Q ss_pred eeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 20 CRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 20 ~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.++.+++.|.+||+|.++|+... ....+|+|++++
T Consensus 55 ~~v~~~v~d~~dGty~V~Y~p~~-~G~y~I~V~~~g 89 (124)
T 2dmb_A 55 TEAEADVIENEDGTYDIFYTAAK-PGTYVIYVRFGG 89 (124)
T ss_dssp CBCCCEEEECTTSCEEEEEECSS-CEEEEEEEEESS
T ss_pred CEEeeEEEeCCCCEEEEEEEcCC-CEEEEEEEEECC
Confidence 57888999999999999999986 577888888765
No 13
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=91.55 E-value=0.049 Score=42.22 Aligned_cols=36 Identities=14% Similarity=0.171 Sum_probs=29.7
Q ss_pred ceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 19 QCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 19 ~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
..++.+++.|.+||+|.++|+... .....|+|+..+
T Consensus 51 p~~~~~~v~d~~dGty~V~Y~p~~-~G~y~I~V~~~g 86 (111)
T 2d7o_A 51 PSKAEITCKDNKDGTCTVSYLPTA-PGDYSIIVRFDD 86 (111)
T ss_dssp SSCCCBCCCCCSSSEEEEEECCSS-CEEEEEECBBSS
T ss_pred CCCceEEEEECCCCEEEEEEEeCC-CeEEEEEEEECC
Confidence 335677899999999999999965 577888888765
No 14
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=91.15 E-value=0.19 Score=38.55 Aligned_cols=35 Identities=17% Similarity=0.140 Sum_probs=31.1
Q ss_pred eeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 20 CRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 20 ~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.++.+++.|..||+|.++|+... ....+|+|++++
T Consensus 55 ~~~~~~v~d~~dGty~v~Y~p~~-~G~y~i~V~~~g 89 (108)
T 2dj4_A 55 LVEPVNVVDNGDGTHTVTYTPSQ-EGPYMVSVKYAD 89 (108)
T ss_dssp CEECCCCEECSSSEEEEEECCSS-CEEEEEEEEESS
T ss_pred CEeeeEEEECCCCEEEEEEEeCC-CeeEEEEEEECC
Confidence 57888999999999999999986 577999999876
No 15
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.11 E-value=0.26 Score=37.52 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=31.0
Q ss_pred ceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 19 QCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 19 ~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
..++.+++.|..||+|.++|+... ....+|+|+..+
T Consensus 62 ~~~~~~~v~D~~dGty~v~y~p~~-~G~y~i~V~~~g 97 (113)
T 2ds4_A 62 DSPVRTMVQDNKDGTYYISYTPKE-PGVYTVWVCIKE 97 (113)
T ss_dssp SCCCEEEEECCSSSEEEEEEECSS-SEEEEEEEEESS
T ss_pred CceeEEEEEECCCCEEEEEEEeCC-CeEEEEEEEECC
Confidence 367788999999999999999987 577899998875
No 16
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.91 E-value=0.15 Score=39.52 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=28.6
Q ss_pred EEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 22 IWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 22 ~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+.+++.|.+||+|.++|+... .....|+|+..+
T Consensus 64 ~~~~v~d~~dGty~v~Y~p~~-~G~y~I~V~~~g 96 (115)
T 2eea_A 64 AEISCIDNKDGTCTVTYLPTL-PGDYSILVKYND 96 (115)
T ss_dssp CEECCBCCSSSEEEEEEECSS-CSCEEEEEEESS
T ss_pred ceEEEEECCCCEEEEEEEeCC-CeeEEEEEEECC
Confidence 566889999999999999966 588999999876
No 17
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=90.76 E-value=0.16 Score=45.54 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=31.3
Q ss_pred CceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 18 RQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 18 ~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+..++.+++.|++||+|.++|+..+ .....|+|+.++
T Consensus 236 gp~~~~~~~~d~~dGt~~v~y~p~~-~G~y~i~V~~~~ 272 (288)
T 2j3s_A 236 GPSKAEISFEDRKDGSCGVAYVVQE-PGDYEVSVKFNE 272 (288)
T ss_dssp ESSCEEEEEEECTTSEEEEEEEESS-CEEEEEEEEETT
T ss_pred CCCCcceeEEECCCCEEEEEEEcCC-CeeEEEEEEECC
Confidence 3456788999999999999999966 678999998876
No 18
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.25 E-value=0.15 Score=40.35 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=29.7
Q ss_pred CceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 18 RQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 18 ~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+..++.+++.|..|| |.++|+... .....|+|++.+
T Consensus 60 gp~~~~~~~~d~~dG-y~V~Y~P~~-~G~y~I~V~~~g 95 (125)
T 2eec_A 60 GPSKVKMDCQETPEG-YKVMYTPMA-PGNYLISVKYGG 95 (125)
T ss_dssp SSSCCCCEEEECSSS-EEEEECCSS-CEEEEEEEEESS
T ss_pred CCCCCcceeEECCCC-EEEEEEcCC-CeEEEEEEEECC
Confidence 445566788999999 999999965 668999999877
No 19
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=89.33 E-value=0.27 Score=41.32 Aligned_cols=37 Identities=22% Similarity=0.125 Sum_probs=31.0
Q ss_pred CceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 18 RQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 18 ~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+..++.+++.|..||+|.++|+... .....|+|+..+
T Consensus 136 gp~~~~~~v~d~~dGty~v~Y~p~~-~G~y~i~V~~~g 172 (191)
T 2k7q_A 136 GPSKVDINTEDLEDGTCRVTYCPTE-PGNYIINIKFAD 172 (191)
T ss_dssp ESSCEEEEEEECTTSCEEEEEEESS-CEEEEEEEEETT
T ss_pred CCCCceEEEEECCCCEEEEEEEeCC-CceEEEEEEECC
Confidence 4456778999999999999999965 677999998876
No 20
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=89.25 E-value=0.41 Score=35.65 Aligned_cols=33 Identities=18% Similarity=0.142 Sum_probs=28.6
Q ss_pred EEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 22 IWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 22 ~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+.+++.|.+||+|.++|+... .....|+|+..+
T Consensus 51 ~~~~v~d~~dGty~v~Y~p~~-~G~y~i~V~~~g 83 (96)
T 1v05_A 51 EEVYVKHMGNRVYNVTYTVKE-KGDYILIVKWGD 83 (96)
T ss_dssp SEEEEEECSTTEEEEEEECSS-CEEEEEEEEETT
T ss_pred eEEEEEeCCCCEEEEEEEeCC-CEEEEEEEEECC
Confidence 477889999999999999987 467899998876
No 21
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=89.16 E-value=0.26 Score=38.76 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=29.7
Q ss_pred eeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 20 CRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 20 ~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.++.+++.|..||+|.++|+... ....+|+|++.+
T Consensus 69 ~~~~~~v~d~~dGty~v~Y~p~~-~G~~~i~V~~~g 103 (128)
T 2dib_A 69 ASTECFVTDNADGTYQVEYTPFE-KGLHVVEVTYDD 103 (128)
T ss_dssp CCCCCEEEECSSSEEEEEECCSS-CSEEEEEEBSSS
T ss_pred CEeeeEEEECCCCEEEEEEEeCC-CEeEEEEEEECC
Confidence 36778899999999999999988 446888888765
No 22
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.41 E-value=0.26 Score=38.36 Aligned_cols=35 Identities=17% Similarity=0.053 Sum_probs=30.3
Q ss_pred eeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 20 CRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 20 ~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.++.+++.|..||+|.++|+... ....+|+|++++
T Consensus 66 ~~~~~~v~d~~dGty~v~Y~p~~-~G~y~i~V~~~g 100 (119)
T 2e9j_A 66 KPKRAIVHDNKDGTYAVTYIPDK-TGRYMIGVTYGG 100 (119)
T ss_dssp CCCCEEEEECCSSEEEEEECCCS-CSEEEECCEESS
T ss_pred CEEEEEEEECCCCEEEEEEEeCC-CEEEEEEEEECC
Confidence 46778899999999999999966 788999998876
No 23
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=87.97 E-value=0.33 Score=43.38 Aligned_cols=45 Identities=22% Similarity=0.170 Sum_probs=35.3
Q ss_pred cccccCCCCceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 10 HGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
|+++++-.+.+++.+++.|..||+|.++|+... .....|.|+..+
T Consensus 37 g~l~v~i~~p~~~~~~~~d~~dGty~v~y~p~~-~G~y~i~V~~~g 81 (288)
T 2j3s_A 37 GGLSLSIEGPSKVDINTEDLEDGTCRVTYCPTE-PGNYIINIKFAD 81 (288)
T ss_dssp CCEEEEEESSSCCEEEEEECTTSEEEEEEECSS-CEEEEEEEEETT
T ss_pred CcEEEEEECCCCceeEEEECCCCEEEEEEECCC-CeEEEEEEEECC
Confidence 334444445567888999999999999999965 677999999876
No 24
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=87.68 E-value=0.48 Score=36.52 Aligned_cols=34 Identities=21% Similarity=0.129 Sum_probs=29.5
Q ss_pred eEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 21 RIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 21 ~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
++.+++.|..||+|.++|+.... ...+|+|++.+
T Consensus 57 ~~~~~v~d~~dGty~v~Y~p~~~-G~y~i~V~~~g 90 (115)
T 2d7m_A 57 PKKANIRDNGDGTYTVSYLPDMS-GRYTITIKYGG 90 (115)
T ss_dssp BCCEEEEECSSSCEEEEECCCSC-EEEEEEEEESS
T ss_pred eeeeEEEECCCCEEEEEEEeCCC-ceEEEEEEECC
Confidence 56678899999999999999884 77899998876
No 25
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=86.90 E-value=0.28 Score=44.13 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=37.3
Q ss_pred cceeeecccccCCCCceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 4 NIVVRVHGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+++..-+.+++.-.+.+++.+++.|..||+|.++|+... .....|.|+..+
T Consensus 37 ~~~~g~~~~~v~i~gp~~~~~~~~d~~dG~y~v~y~p~~-~G~~~i~v~~~~ 87 (311)
T 1wlh_A 37 HRTDGGDGFVVTIEGPAPVDPVMVDNGDGTYDVEFEPKE-AGDYVINLTLDG 87 (311)
T ss_dssp ---CCCCCEEEEEESSSCCCCBCCCCSSSEEEEEECCCS-CSEEEEEEEESS
T ss_pred EeccCCCeEEEEEECCCccEEEEEECCCCEEEEEEEccC-ccceEEEEEECC
Confidence 444444555555455678888999999999999999744 677999999876
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=84.75 E-value=1.4 Score=39.26 Aligned_cols=54 Identities=9% Similarity=-0.110 Sum_probs=46.9
Q ss_pred CChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhcc
Q psy10617 221 EDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMG 274 (279)
Q Consensus 221 ~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa~~ 274 (279)
.|.++|.++|..+.++++..++++++|++++++..+.+.+..-+..++++-.+.
T Consensus 329 ~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~ 382 (394)
T 3okp_A 329 SDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRK 382 (394)
T ss_dssp TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC-
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccC
Confidence 378999999999999999999999999999999999999888777777765543
No 27
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=84.43 E-value=0.69 Score=38.85 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=28.8
Q ss_pred eEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 21 RIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 21 ~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.+.+++.|.+||+|.++|+... .....|+|+..+
T Consensus 139 ~~~~~~~d~~dGty~v~Y~p~~-~G~y~i~V~~~g 172 (188)
T 2k7p_A 139 KAEISCTDNQDGTCSVSYLPVL-PGDYSILVKYNE 172 (188)
T ss_dssp CCEEEEEECTTSEEEEEEECCS-SEEEEEEEEETT
T ss_pred CCeEEEEECCCCEEEEEEEeCC-CEEEEEEEEECC
Confidence 3567889999999999999965 677899998875
No 28
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=84.28 E-value=2.1 Score=38.45 Aligned_cols=54 Identities=13% Similarity=0.117 Sum_probs=46.4
Q ss_pred CChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhcc
Q psy10617 221 EDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMG 274 (279)
Q Consensus 221 ~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa~~ 274 (279)
.|.++|.++|..+.++++..++++++|++++++..+.+.+..-+..++++-.+.
T Consensus 335 ~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 335 GDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRD 388 (394)
T ss_dssp TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC--
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 378899999999999999999999999999999999999988888877765443
No 29
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=83.16 E-value=1.7 Score=38.41 Aligned_cols=50 Identities=18% Similarity=0.060 Sum_probs=43.3
Q ss_pred ChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHh
Q psy10617 222 DLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNF 272 (279)
Q Consensus 222 D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa 272 (279)
|.++|.++|..+.++++..++++++|+++++++ +...+..-+..++++|.
T Consensus 323 ~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 323 SQEQLNEVLRKALTQSPLRMAWAENARHYADTQ-DLYSLPEKAADIITGGL 372 (374)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHS-CCSCHHHHHHHHHHCC-
T ss_pred CHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHhh
Confidence 788999999999999999999999999999987 77777777778777664
No 30
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=83.13 E-value=0.78 Score=36.96 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=33.1
Q ss_pred cccccCCCCceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 10 HGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
|.|+++-.+..++.+++.|..|| |.++|+.... ..-.|+|+..+
T Consensus 76 g~l~v~I~gPs~~~~~~~d~~dG-y~V~YtP~~~-G~y~I~Vk~~g 119 (138)
T 2nqc_A 76 GALSVTIDGPSKVQLDCRECPEG-HVVTYTPMAP-GNYLIAIKYGG 119 (138)
T ss_dssp CCEEEEEESSSCCEEEEEEETTE-EEEEEECCSC-EEEEEEEEESS
T ss_pred CcEEEEEECCCCCeeeEEECCCc-EEEEEEcCCC-EEEEEEEEECC
Confidence 34444444556667889999999 9999998764 47888888876
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=76.23 E-value=4.9 Score=35.76 Aligned_cols=53 Identities=8% Similarity=-0.028 Sum_probs=45.7
Q ss_pred CChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhcc
Q psy10617 221 EDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMG 274 (279)
Q Consensus 221 ~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa~~ 274 (279)
.|.++|.++|..+.++++..++++++|+++++ ..+.+.+..-+..++++..+.
T Consensus 334 ~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 334 DDADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHHHHHHHHHHCCT
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhh
Confidence 57889999999999999999999999999998 788888888777777776543
No 32
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=75.66 E-value=4.4 Score=36.55 Aligned_cols=51 Identities=18% Similarity=0.167 Sum_probs=43.2
Q ss_pred CCCChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q psy10617 219 VKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNF 270 (279)
Q Consensus 219 V~~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~e 270 (279)
++ |.++|.++|..+.++++..++++++|++++++..+.+.+..-+..++++
T Consensus 363 ~~-d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 363 VR-DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp ES-SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred EC-CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 44 7889999999999999999999999999999888888877766665543
No 33
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=74.35 E-value=4.6 Score=36.35 Aligned_cols=51 Identities=24% Similarity=0.105 Sum_probs=45.0
Q ss_pred CChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHh
Q psy10617 221 EDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNF 272 (279)
Q Consensus 221 ~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa 272 (279)
.|.++|.++| .+.++++..++++++|++++++..+.+.+..-+..++++-.
T Consensus 341 ~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 391 (413)
T 3oy2_A 341 IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLL 391 (413)
T ss_dssp CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3678999999 99999999999999999999989999998887777777654
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=73.44 E-value=7.2 Score=36.28 Aligned_cols=53 Identities=13% Similarity=-0.020 Sum_probs=45.9
Q ss_pred CChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhc
Q psy10617 221 EDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFM 273 (279)
Q Consensus 221 ~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa~ 273 (279)
.|.++|.++|..+.++++..++++++|++++.+..+.+.+..-+..++++-..
T Consensus 409 ~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~ 461 (499)
T 2r60_A 409 EDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIAD 461 (499)
T ss_dssp TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 47889999999999999999999999999999988988888777777766543
No 35
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=73.11 E-value=2.8 Score=35.44 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=30.3
Q ss_pred eeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 20 CRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 20 ~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.++..++.|..||+|.++|+... .....|+|++.+
T Consensus 56 ~~~~~~v~d~~dGty~v~y~p~~-~G~~~i~V~~~g 90 (212)
T 1qfh_A 56 LVVDAKVTDNNDGTYGVVYDAPV-EGNYNVNVTLRG 90 (212)
T ss_dssp CEECCEEEECSSSEEEEEECCCS-SEEEEEEEEETT
T ss_pred CEeeeEEEECCCcEEEEEEECcC-cEEEEEEEEECC
Confidence 47777899999999999999977 557899999876
No 36
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=71.21 E-value=7.9 Score=35.00 Aligned_cols=51 Identities=14% Similarity=0.074 Sum_probs=42.1
Q ss_pred CChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHh
Q psy10617 221 EDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNF 272 (279)
Q Consensus 221 ~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa 272 (279)
.|.++|.++|..+.++++..++++++|++++++ .+.+.+..-+..++++-.
T Consensus 376 ~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~ 426 (438)
T 3c48_A 376 HSPHAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAI 426 (438)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHh
Confidence 478899999999999999999999999999988 777777666666665544
No 37
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=70.90 E-value=5.7 Score=30.78 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=31.7
Q ss_pred CCChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCch
Q psy10617 220 KEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQ 258 (279)
Q Consensus 220 ~~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~ 258 (279)
..|.++|.++|..+.++++..++++++|++++++ .+.+
T Consensus 124 ~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~ 161 (166)
T 3qhp_A 124 PNNAKDLSAKIDWWLENKLERERMQNEYAKSALN-YTLE 161 (166)
T ss_dssp TTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HC--
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-CChh
Confidence 4578999999999999999999999999999844 4443
No 38
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=61.77 E-value=10 Score=30.17 Aligned_cols=33 Identities=15% Similarity=0.096 Sum_probs=30.7
Q ss_pred CChhhHHHHHHHhhh-ChHHHHHHHHHHHHHHHH
Q psy10617 221 EDLSDLVERVRWAQD-NEDLVVVMVRNAQILARE 253 (279)
Q Consensus 221 ~D~sDL~e~I~w~~~-hd~~A~~IA~~a~~f~~~ 253 (279)
.|.++|.++|..+.+ +++..++++++|++++++
T Consensus 165 ~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 165 GDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 478899999999999 999999999999999887
No 39
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=54.72 E-value=13 Score=33.07 Aligned_cols=49 Identities=10% Similarity=-0.036 Sum_probs=40.3
Q ss_pred CChhhHHHHHHHhhh-ChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q psy10617 221 EDLSDLVERVRWAQD-NEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNF 270 (279)
Q Consensus 221 ~D~sDL~e~I~w~~~-hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~e 270 (279)
.|.++|.++|..+.+ +++..++++++|++++ +..+.+.+..=+..++++
T Consensus 380 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 380 GDPGELANAILKALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTG 429 (439)
T ss_dssp TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHH
Confidence 478899999999888 8999999999999999 558888777655555554
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=47.28 E-value=37 Score=34.79 Aligned_cols=51 Identities=8% Similarity=-0.192 Sum_probs=42.1
Q ss_pred ChhhHHHHHHHhh----hChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHh
Q psy10617 222 DLSDLVERVRWAQ----DNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNF 272 (279)
Q Consensus 222 D~sDL~e~I~w~~----~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa 272 (279)
|.++|.++|..+. ++++..++++++|++++.+..+.+.+..=+..+.+.|.
T Consensus 716 D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g 770 (816)
T 3s28_A 716 HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYG 770 (816)
T ss_dssp SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 6788888886554 89999999999999999999998888777666666553
No 41
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=46.89 E-value=14 Score=32.81 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=28.6
Q ss_pred eEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 21 RIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 21 ~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.+..++.|..||+|.++|+... .....|+|++.+
T Consensus 156 ~~~~~v~d~~dGty~v~y~p~~-~G~y~i~V~~~g 189 (311)
T 1wlh_A 156 VVDAKVTDNNDGTYGVVYDAPV-EGNYNVNVTLRG 189 (311)
T ss_dssp BCCCEEEEETTTEEEEEECCCS-SEEEEEEEEETT
T ss_pred eeeEEEEECCCCEEEEEEECCC-CEEEEEEEEECC
Confidence 4566789999999999999977 557889998876
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=41.83 E-value=38 Score=31.76 Aligned_cols=51 Identities=8% Similarity=0.048 Sum_probs=39.2
Q ss_pred CCCChhhHHHHHHHhhhChHHHHHHHHHHHHHH--HHhcCchhHHHHHHHHHH
Q psy10617 219 VKEDLSDLVERVRWAQDNEDLVVVMVRNAQILA--REKLMPQDILCYHAVLFN 269 (279)
Q Consensus 219 V~~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~--~~~L~~~~v~cY~~~LL~ 269 (279)
|..|.+++.++|..+.++++..++++++|++.+ .+..+.+.+..-+..+++
T Consensus 505 v~~~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~ 557 (568)
T 2vsy_A 505 NVADDAAFVAKAVALASDPAALTALHARVDVLRRASGVFHMDGFADDFGALLQ 557 (568)
T ss_dssp BCSSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Confidence 444677899999999999999999999999998 566777666554444443
No 43
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=38.85 E-value=41 Score=27.99 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=26.4
Q ss_pred eEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 21 RIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 21 ~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.+-.++.|..||+|.+.|.... .....|+|...+
T Consensus 147 ~~~~~v~d~~dGty~v~y~p~~-~G~y~v~V~~~g 180 (212)
T 1qfh_A 147 EITLDAIDNQDGTYTAAYSLVG-NGRFSTGVKLNG 180 (212)
T ss_dssp EEEEEEEECSSSEEEEEEEEES-SEEEEEEEEETT
T ss_pred ceeeEEEECCCCEEEEEEEcCC-CEEEEEEEEECC
Confidence 4556788999999999999977 466777776644
No 44
>2dt7_B Splicing factor 3 subunit 1; structure genomics, SF3A120, SF3A60, SURP domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.217.1.1
Probab=38.36 E-value=31 Score=25.23 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHH------------HhcCch-hHHHHHHHHHHHHhc
Q psy10617 238 DLVVVMVRNAQILAR------------EKLMPQ-DILCYHAVLFNFNFM 273 (279)
Q Consensus 238 ~~A~~IA~~a~~f~~------------~~L~~~-~v~cY~~~LL~eYa~ 273 (279)
..|+=+|+||.+|.. .||.+. ....|+.+++.+|.+
T Consensus 37 ~TA~FVArnG~~Fe~~l~~re~~NpqF~FL~p~h~~~~yy~~~v~~Y~~ 85 (85)
T 2dt7_B 37 LTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTK 85 (85)
T ss_dssp HHHHHHHHHCHHHHHHHHHHTTTCGGGGGGSTTSTHHHHHHHHHHHHCC
T ss_pred HHHHHHhhccHHHHHHHHHhcCCCCceeeCCCCCCchHHHHHHHHHHhC
Confidence 467777888877652 357776 478999999999964
No 45
>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex (phosphotransferase/receptor), phosphotransferase, SH2 domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1 PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A
Probab=36.32 E-value=27 Score=26.17 Aligned_cols=26 Identities=15% Similarity=0.244 Sum_probs=19.9
Q ss_pred ecCCCceEEEeeecccccceEEEEEecC
Q psy10617 28 HTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 28 ~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+..||+|+||.. .....+.+.|..++
T Consensus 28 ~~~~G~FLVR~S--~~~g~y~LSv~~~~ 53 (112)
T 1h9o_A 28 GKRDGTFLVRES--SKQGCYACSVVVDG 53 (112)
T ss_dssp TCCTTEEEEEEC--SSTTCEEEEEEETT
T ss_pred CCCCceEEEeec--CCCCCEEEEEEECC
Confidence 468999999998 44566777777754
No 46
>2dt6_A Splicing factor 3 subunit 1; structure genomics, SF3A120, SURP domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.217.1.1
Probab=32.66 E-value=37 Score=23.21 Aligned_cols=39 Identities=18% Similarity=0.120 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHH------------HhcCchh-HHHHHHHHHHHHhccCC
Q psy10617 238 DLVVVMVRNAQILAR------------EKLMPQD-ILCYHAVLFNFNFMGSK 276 (279)
Q Consensus 238 ~~A~~IA~~a~~f~~------------~~L~~~~-v~cY~~~LL~eYa~~s~ 276 (279)
..|+-+|+||.+|-. .||.+.+ ...|+..+|.+|.....
T Consensus 9 ktA~fVarnG~~fE~~l~~~e~~np~F~FL~~~~~~h~YY~~~l~~~~~g~~ 60 (64)
T 2dt6_A 9 KTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKA 60 (64)
T ss_dssp HHHHHHHHHCTHHHHHHHHHSTTCGGGGGGSTTSTTHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCHHHHHHHHHhccCCCCcccCCCCCCCchHHHHHHHHHHcCCC
Confidence 467777788777642 3566665 67899999999986543
No 47
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=29.20 E-value=62 Score=23.70 Aligned_cols=34 Identities=26% Similarity=0.240 Sum_probs=26.6
Q ss_pred eEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 21 RIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 21 ~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.+..++.|..||+|-+.|+-.+ ...-.|.|++.+
T Consensus 35 ~~~~~v~d~~dGtY~v~ytP~e-~G~h~v~V~~~g 68 (93)
T 2d7n_A 35 TARPNITDNKDGTITVRYAPTE-KGLHQMGIKYDG 68 (93)
T ss_dssp EECCEEEECSSSCEEEEECCSS-CEEEEEEEEESS
T ss_pred ccceEEEECCCCEEEEEEEccC-CEEEEEEEEECC
Confidence 3556788999999999999876 456677777765
No 48
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=28.32 E-value=58 Score=28.23 Aligned_cols=49 Identities=4% Similarity=-0.074 Sum_probs=33.7
Q ss_pred hhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhccCCC
Q psy10617 223 LSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMGSKN 277 (279)
Q Consensus 223 ~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa~~s~~ 277 (279)
.++|.++|..+ +++..++++++|++++. ..+. ......+++-|.+.+++
T Consensus 312 ~~~la~~i~~l--~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~y~~~~~~ 360 (364)
T 1f0k_A 312 VDAVANTLAGW--SRETLLTMAERARAASI-PDAT---ERVANEVSRVARALEHH 360 (364)
T ss_dssp HHHHHHHHHTC--CHHHHHHHHHHHHHTCC-TTHH---HHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHhhc-cCHH---HHHHHHHHHHHHHHHhh
Confidence 67899999988 89999999999988764 2333 33344566677766654
No 49
>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase; NMR {Homo sapiens}
Probab=28.15 E-value=61 Score=24.76 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=18.9
Q ss_pred CCCceEEEeeecccccceEEEEEec
Q psy10617 30 TDGVIIVRYKLYEVCYSFNIVIISK 54 (279)
Q Consensus 30 ~dg~~~~r~~~~~~~~~~~~~v~~~ 54 (279)
.||+||||.. ...+.+.+.|..+
T Consensus 32 ~~G~FLVR~S--s~~g~y~LSv~~~ 54 (125)
T 2ge9_A 32 KEGGFIVRDS--SKAGKYTVSVFAK 54 (125)
T ss_dssp CTTEEEEEEC--SSSCCEEEEEEES
T ss_pred CCceEEEEec--CCCCCEEEEEEec
Confidence 8999999998 4567788888874
No 50
>2auh_B Growth factor receptor-bound protein 14; tyrosine kinase, BPS region, transferase/signaling protein complex; HET: PTR; 3.20A {Homo sapiens}
Probab=26.46 E-value=42 Score=22.91 Aligned_cols=19 Identities=5% Similarity=0.085 Sum_probs=15.5
Q ss_pred hhChHHHHHHH-HHHHHHHH
Q psy10617 234 QDNEDLVVVMV-RNAQILAR 252 (279)
Q Consensus 234 ~~hd~~A~~IA-~~a~~f~~ 252 (279)
.+||.||+.|| +.|+.|-+
T Consensus 29 IenP~Ea~s~a~eeg~~Wrk 48 (59)
T 2auh_B 29 IENPTEALSVAVEEGLAWRK 48 (59)
T ss_dssp CCCHHHHHHHHHHHHHHHHC
T ss_pred ecChHHHHHHHHHhhhhhcc
Confidence 57999999999 77777754
No 51
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=25.94 E-value=1.1e+02 Score=27.92 Aligned_cols=46 Identities=17% Similarity=0.026 Sum_probs=35.1
Q ss_pred ChhhHHHHHHHhh---hChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q psy10617 222 DLSDLVERVRWAQ---DNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNF 270 (279)
Q Consensus 222 D~sDL~e~I~w~~---~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~e 270 (279)
|.++|.++|..+. ++++..++++++|++ +..+.+.+..-+..++++
T Consensus 427 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 427 NAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp SHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHH
Confidence 6788999999988 799999999999964 667777766555555443
No 52
>2kvs_A Uncharacterized protein MW0776; PSI-2, NESG, BIG target, structural genomics, protein structure initiative; NMR {Staphylococcus aureus}
Probab=25.93 E-value=35 Score=24.86 Aligned_cols=32 Identities=9% Similarity=0.022 Sum_probs=21.4
Q ss_pred hhHHHHHHHhhh--ChHHHHHHHHHHHHHHHHhc
Q psy10617 224 SDLVERVRWAQD--NEDLVVVMVRNAQILAREKL 255 (279)
Q Consensus 224 sDL~e~I~w~~~--hd~~A~~IA~~a~~f~~~~L 255 (279)
.|-.+..+|+.. -|.++-+|+++|-....+.|
T Consensus 40 ~d~~eIs~Yle~~~~~~~~~e~vkralsly~~~~ 73 (80)
T 2kvs_A 40 ERHQVIRAYVMSNYTDHQLIETTNRAISLYMANL 73 (80)
T ss_dssp SSSHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 344444555544 36778999999988776654
No 53
>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS proline, domain swapped dimer, SH transferase; HET: CIT; 2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A 1lum_A 1lun_A 2k79_B 2k7a_B
Probab=25.74 E-value=76 Score=23.53 Aligned_cols=23 Identities=17% Similarity=0.431 Sum_probs=18.3
Q ss_pred CCCceEEEeeecccccceEEEEEec
Q psy10617 30 TDGVIIVRYKLYEVCYSFNIVIISK 54 (279)
Q Consensus 30 ~dg~~~~r~~~~~~~~~~~~~v~~~ 54 (279)
.||+|+||-. .....+.+.|...
T Consensus 30 ~~G~FLVR~S--~~~g~y~LSv~~~ 52 (118)
T 3s9k_A 30 KEGAFMVRDS--RTPGTYTVSVFTK 52 (118)
T ss_dssp CTTCEEEEEC--SSTTCEEEEEEEC
T ss_pred CCCeEEEEee--CCCCCEEEEEEec
Confidence 4999999988 5566688888775
No 54
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=25.40 E-value=64 Score=28.59 Aligned_cols=46 Identities=9% Similarity=-0.014 Sum_probs=37.5
Q ss_pred ChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q psy10617 222 DLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLF 268 (279)
Q Consensus 222 D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL 268 (279)
|-++|.++|..+.++++..++++++++++..++ ..+.+...+..++
T Consensus 362 ~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 407 (412)
T 3otg_A 362 SPDSVSGAAKRLLAEESYRAGARAVAAEIAAMP-GPDEVVRLLPGFA 407 (412)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHSC-CHHHHHTTHHHHH
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHh
Confidence 567899999999999999999999999988765 6666666555554
No 55
>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.25 E-value=52 Score=25.43 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=19.5
Q ss_pred cCCCceEEEeeecccccceEEEEEec
Q psy10617 29 TTDGVIIVRYKLYEVCYSFNIVIISK 54 (279)
Q Consensus 29 ~~dg~~~~r~~~~~~~~~~~~~v~~~ 54 (279)
..||+|+||... ......+.|..+
T Consensus 42 ~~dG~FLVR~S~--~~g~y~LSv~~~ 65 (126)
T 2cr4_A 42 PQDGLYCIRNSS--TKSGKVLVVWDE 65 (126)
T ss_dssp CCTTCEEEEECS--STTCEEEEEEET
T ss_pred CCCCeEEEEecC--CCCCEEEEEEeC
Confidence 357999999987 567788888886
No 56
>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction; NMR {Homo sapiens}
Probab=24.83 E-value=61 Score=23.95 Aligned_cols=23 Identities=22% Similarity=0.436 Sum_probs=18.4
Q ss_pred CCCceEEEeeecccccceEEEEEec
Q psy10617 30 TDGVIIVRYKLYEVCYSFNIVIISK 54 (279)
Q Consensus 30 ~dg~~~~r~~~~~~~~~~~~~v~~~ 54 (279)
.||+|+||.. .....+.+.|..+
T Consensus 32 ~~G~FLVR~S--~~~g~y~LSv~~~ 54 (110)
T 2ekx_A 32 KEGAFMVRNS--SQVGMYTVSLFSK 54 (110)
T ss_dssp CTTEEEEEEC--SSTTCEEEEECCC
T ss_pred CCceEEEEec--CCCCCEEEEEEec
Confidence 8999999998 3466788888764
No 57
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=24.27 E-value=8.9 Score=33.73 Aligned_cols=33 Identities=6% Similarity=-0.009 Sum_probs=28.0
Q ss_pred CCCChhhHHHHHHHhhhChHHHHHHHHHHHHHH
Q psy10617 219 VKEDLSDLVERVRWAQDNEDLVVVMVRNAQILA 251 (279)
Q Consensus 219 V~~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~ 251 (279)
|+.|.++|.++|..+.++++..++++++|++++
T Consensus 325 v~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~ 357 (375)
T 3beo_A 325 AGTDEETIFSLADELLSDKEAHDKMSKASNPYG 357 (375)
T ss_dssp CCSCHHHHHHHHHHHHHCHHHHHHHCCCCCTTC
T ss_pred cCCCHHHHHHHHHHHHhChHhHhhhhhcCCCCC
Confidence 445788999999999999999999999887664
No 58
>4esw_A Pyrimidine biosynthesis enzyme THI13; thiamin pyrimidine biosynthesis, transferase; HET: CIT; 1.60A {Candida albicans} PDB: 4esx_A*
Probab=23.23 E-value=55 Score=28.76 Aligned_cols=24 Identities=8% Similarity=0.014 Sum_probs=19.8
Q ss_pred hhhHHHHHHHhhhChHHHHHHHHH
Q psy10617 223 LSDLVERVRWAQDNEDLVVVMVRN 246 (279)
Q Consensus 223 ~sDL~e~I~w~~~hd~~A~~IA~~ 246 (279)
+.-+.++++|+++||++|-+|...
T Consensus 224 l~A~~ka~~~~~~nP~eA~~i~~~ 247 (342)
T 4esw_A 224 LKAIKRATDYMLAHPREAWAEYGN 247 (342)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHH
Confidence 456889999999999998887654
No 59
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=22.68 E-value=1e+02 Score=27.98 Aligned_cols=46 Identities=15% Similarity=0.123 Sum_probs=34.9
Q ss_pred ChhhHHHHHHHhh---hChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q psy10617 222 DLSDLVERVRWAQ---DNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNF 270 (279)
Q Consensus 222 D~sDL~e~I~w~~---~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~e 270 (279)
|.++|.++|..+. ++++..++++++|++ +..+.+.+..=+..++++
T Consensus 426 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 426 TLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 6788999999988 799999999999964 566666665555555444
No 60
>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2; SH2, phosphoinositide phospholipase C, PLC-gamma-2, phospholipase C-gamma-2; NMR {Rattus norvegicus}
Probab=21.79 E-value=59 Score=24.78 Aligned_cols=24 Identities=21% Similarity=0.371 Sum_probs=18.3
Q ss_pred CCCceEEEeeecccccceEEEEEecC
Q psy10617 30 TDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 30 ~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
.||+|+||..- ....+.+.|..++
T Consensus 40 ~~G~FLVR~S~--~~g~y~LSv~~~~ 63 (124)
T 2eob_A 40 RDGAFLIRKRE--GTDSYAITFRARG 63 (124)
T ss_dssp SSSEEEEECCT--TSSCEEEEEEETT
T ss_pred CCCEEEEEecC--CCCCEEEEEEeCC
Confidence 69999999887 4566777777654
No 61
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=21.49 E-value=2.1e+02 Score=26.91 Aligned_cols=50 Identities=6% Similarity=-0.143 Sum_probs=37.4
Q ss_pred CChhhHHHHHHHhhhC-hHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhcc
Q psy10617 221 EDLSDLVERVRWAQDN-EDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMG 274 (279)
Q Consensus 221 ~D~sDL~e~I~w~~~h-d~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa~~ 274 (279)
.|.+++.++|..+.++ +++.+++++++++.++++ + +..+....+..|.+.
T Consensus 404 ~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~-s---~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 YDRDEVAAALDRALTMSLAERISRHAEMLDVIVKN-D---INHWQECFISDLKQI 454 (482)
T ss_dssp TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHT-C---HHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-C---HHHHHHHHHHHHHhc
Confidence 3788999999999885 577889999999999875 3 444445566666554
No 62
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.45 E-value=96 Score=22.86 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=25.7
Q ss_pred EEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617 22 IWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE 55 (279)
Q Consensus 22 ~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~ 55 (279)
+-.++.|..||+|-+.|.--+ ...-+|.|++.+
T Consensus 44 ~~~~v~d~~dGtY~v~ytP~e-~G~h~v~V~~~G 76 (95)
T 2ee9_A 44 ATPEIVDNKDGTVTVRYAPTE-VGLHEMHIKYMG 76 (95)
T ss_dssp ECCEEEECSSSCEEEECCCCS-SEEEEEEEEESS
T ss_pred cccEEEeCCCCeEEEEEEecC-CEeEEEEEEECC
Confidence 445778999999999998876 556677777765
No 63
>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.34 E-value=75 Score=24.10 Aligned_cols=23 Identities=26% Similarity=0.367 Sum_probs=18.3
Q ss_pred CCCceEEEeeecccccceEEEEEec
Q psy10617 30 TDGVIIVRYKLYEVCYSFNIVIISK 54 (279)
Q Consensus 30 ~dg~~~~r~~~~~~~~~~~~~v~~~ 54 (279)
.||+|+||.. .....+.+.|..+
T Consensus 37 ~~G~FLVR~S--~~~g~y~LSv~~~ 59 (125)
T 2dm0_A 37 KEGAFIVRDS--RHLGSYTISVFMG 59 (125)
T ss_dssp STTCBCEEEE--TTEEEEEEEEECC
T ss_pred CCCEEEEEec--CCCCCEEEEEEec
Confidence 8999999998 3466678888774
No 64
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=21.10 E-value=42 Score=26.30 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=24.4
Q ss_pred CCCChhhHHHHHHHhhhChHH-HHHHHHHHHHH
Q psy10617 219 VKEDLSDLVERVRWAQDNEDL-VVVMVRNAQIL 250 (279)
Q Consensus 219 V~~D~sDL~e~I~w~~~hd~~-A~~IA~~a~~f 250 (279)
+..|.++|.++|..+.++++. .+++.++|++|
T Consensus 145 ~~~d~~~l~~~i~~l~~~~~~~~~~~~~~a~~f 177 (177)
T 2f9f_A 145 VNADVNEIIDAMKKVSKNPDKFKKDCFRRAKEF 177 (177)
T ss_dssp ECSCHHHHHHHHHHHHHCTTTTHHHHHHHHHTC
T ss_pred eCCCHHHHHHHHHHHHhCHHHHHHHHHHHHhcC
Confidence 356889999999999988876 66666666543
Done!