Query psy10619
Match_columns 246
No_of_seqs 295 out of 2715
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 22:57:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10619.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10619hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jrx_A Acetyl-COA carboxylase 100.0 1.3E-32 4.5E-37 245.0 20.0 186 1-190 93-307 (587)
2 3glk_A Acetyl-COA carboxylase 100.0 1.6E-32 5.4E-37 243.6 18.3 186 1-190 77-291 (540)
3 3ouz_A Biotin carboxylase; str 100.0 8.3E-32 2.8E-36 235.3 21.0 190 1-190 34-223 (446)
4 3n6r_A Propionyl-COA carboxyla 100.0 1.8E-32 6.2E-37 249.1 12.0 190 1-190 30-219 (681)
5 3u9t_A MCC alpha, methylcroton 100.0 3.4E-32 1.1E-36 247.2 11.2 190 1-190 56-245 (675)
6 2vpq_A Acetyl-COA carboxylase; 100.0 9.7E-30 3.3E-34 222.6 21.3 187 2-188 30-216 (451)
7 1ulz_A Pyruvate carboxylase N- 100.0 1.4E-29 4.7E-34 221.6 20.9 186 2-188 31-216 (451)
8 2w70_A Biotin carboxylase; lig 100.0 1.3E-29 4.4E-34 221.7 20.6 187 2-188 31-218 (449)
9 2dzd_A Pyruvate carboxylase; b 100.0 5.9E-29 2E-33 218.2 22.4 188 2-189 35-223 (461)
10 1w96_A ACC, acetyl-coenzyme A 100.0 2.4E-29 8.3E-34 224.9 20.0 181 5-189 90-296 (554)
11 3va7_A KLLA0E08119P; carboxyla 100.0 7.3E-30 2.5E-34 243.0 11.3 189 1-190 59-247 (1236)
12 3hbl_A Pyruvate carboxylase; T 100.0 1.5E-29 5E-34 240.3 9.0 190 1-190 32-222 (1150)
13 2qf7_A Pyruvate carboxylase pr 100.0 3.8E-29 1.3E-33 238.0 10.6 190 1-190 42-238 (1165)
14 4dim_A Phosphoribosylglycinami 99.9 9.5E-26 3.3E-30 194.5 16.7 166 6-188 39-204 (403)
15 3vmm_A Alanine-anticapsin liga 99.9 9.9E-26 3.4E-30 197.7 14.4 179 2-190 57-259 (474)
16 1kjq_A GART 2, phosphoribosylg 99.9 7E-25 2.4E-29 188.3 18.4 174 3-190 39-213 (391)
17 3lp8_A Phosphoribosylamine-gly 99.9 5.1E-25 1.7E-29 191.9 16.8 152 30-190 68-224 (442)
18 3mjf_A Phosphoribosylamine--gl 99.9 1.7E-24 5.8E-29 188.0 17.5 158 30-191 52-209 (431)
19 2dwc_A PH0318, 433AA long hypo 99.9 1.7E-24 5.8E-29 188.4 16.1 171 3-187 47-218 (433)
20 3aw8_A PURK, phosphoribosylami 99.9 3.1E-24 1.1E-28 183.0 16.7 164 2-189 26-190 (369)
21 2yw2_A Phosphoribosylamine--gl 99.9 2.2E-24 7.7E-29 187.1 14.0 152 30-190 47-203 (424)
22 2ip4_A PURD, phosphoribosylami 99.9 9.4E-24 3.2E-28 182.9 17.0 150 30-190 46-198 (417)
23 2pn1_A Carbamoylphosphate synt 99.9 2.8E-24 9.5E-29 180.6 12.5 168 2-187 32-202 (331)
24 3vot_A L-amino acid ligase, BL 99.9 1.7E-24 5.8E-29 187.9 11.3 178 2-190 34-216 (425)
25 4e4t_A Phosphoribosylaminoimid 99.9 1E-23 3.6E-28 182.4 15.9 164 3-190 63-231 (419)
26 3i12_A D-alanine-D-alanine lig 99.9 7.2E-24 2.4E-28 180.4 14.1 138 43-189 96-238 (364)
27 3k5i_A Phosphoribosyl-aminoimi 99.9 2E-23 6.9E-28 179.9 16.3 164 3-190 52-220 (403)
28 2yrx_A Phosphoribosylglycinami 99.9 2.1E-23 7.1E-28 182.4 16.5 155 30-190 68-224 (451)
29 2xcl_A Phosphoribosylamine--gl 99.9 3.2E-24 1.1E-28 186.1 11.2 155 30-190 47-203 (422)
30 2qk4_A Trifunctional purine bi 99.9 1.1E-23 3.8E-28 184.2 14.3 151 30-189 73-229 (452)
31 3q2o_A Phosphoribosylaminoimid 99.9 5.8E-23 2E-27 176.4 18.1 164 2-188 41-205 (389)
32 3e5n_A D-alanine-D-alanine lig 99.9 6.3E-24 2.2E-28 181.8 10.0 138 43-189 115-257 (386)
33 1a9x_A Carbamoyl phosphate syn 99.9 7.4E-23 2.5E-27 194.8 18.0 173 4-190 49-226 (1073)
34 3k3p_A D-alanine--D-alanine li 99.9 4.5E-23 1.5E-27 176.1 14.6 137 45-190 119-261 (383)
35 3tqt_A D-alanine--D-alanine li 99.9 2.6E-23 9E-28 177.0 13.1 137 44-189 97-239 (372)
36 3orq_A N5-carboxyaminoimidazol 99.9 7.6E-23 2.6E-27 174.9 15.4 164 2-188 39-203 (377)
37 4fu0_A D-alanine--D-alanine li 99.9 1.7E-23 5.9E-28 177.6 10.9 144 38-190 90-237 (357)
38 1vkz_A Phosphoribosylamine--gl 99.9 2.5E-23 8.5E-28 179.9 11.9 149 33-190 58-207 (412)
39 4eg0_A D-alanine--D-alanine li 99.9 3.2E-23 1.1E-27 173.3 12.0 141 42-190 62-207 (317)
40 1ehi_A LMDDL2, D-alanine:D-lac 99.9 6.6E-23 2.2E-27 175.2 13.8 136 44-188 92-233 (377)
41 3ax6_A Phosphoribosylaminoimid 99.9 7.4E-23 2.5E-27 175.1 13.9 158 3-189 29-187 (380)
42 3lwb_A D-alanine--D-alanine li 99.9 2.4E-23 8.2E-28 177.5 10.2 137 45-190 109-248 (373)
43 1a9x_A Carbamoyl phosphate syn 99.9 3E-23 1E-27 197.5 10.7 171 5-190 600-772 (1073)
44 2i87_A D-alanine-D-alanine lig 99.9 2E-22 6.9E-27 171.5 13.4 138 42-188 84-229 (364)
45 4ffl_A PYLC; amino acid, biosy 99.9 1.4E-22 4.7E-27 172.5 10.7 152 2-191 28-179 (363)
46 3se7_A VANA; alpha-beta struct 99.9 1.2E-22 4E-27 171.9 7.8 137 43-190 88-225 (346)
47 3r5x_A D-alanine--D-alanine li 99.9 3.4E-22 1.2E-26 166.2 10.0 136 44-188 54-191 (307)
48 2fb9_A D-alanine:D-alanine lig 99.9 3.6E-22 1.2E-26 167.2 8.6 134 43-188 74-209 (322)
49 2z04_A Phosphoribosylaminoimid 99.9 4.3E-22 1.5E-26 169.5 8.2 157 3-189 29-186 (365)
50 1e4e_A Vancomycin/teicoplanin 99.9 5.4E-22 1.8E-26 167.6 8.1 136 43-189 88-224 (343)
51 2pvp_A D-alanine-D-alanine lig 99.9 1.7E-21 5.8E-26 165.7 10.1 127 45-181 107-237 (367)
52 1iow_A DD-ligase, DDLB, D-ALA\ 99.8 9.1E-21 3.1E-25 157.3 11.0 135 43-187 52-195 (306)
53 2cqy_A Propionyl-COA carboxyla 99.8 1.3E-21 4.4E-26 137.8 4.7 105 82-186 4-108 (108)
54 3eth_A Phosphoribosylaminoimid 99.8 2.1E-20 7.2E-25 157.9 9.4 127 45-189 42-171 (355)
55 1uc8_A LYSX, lysine biosynthes 99.8 1.7E-19 6E-24 147.6 8.1 139 44-188 47-187 (280)
56 3ln7_A Glutathione biosynthesi 99.8 1.1E-19 3.8E-24 166.0 6.6 149 32-190 433-589 (757)
57 2r7k_A 5-formaminoimidazole-4- 99.7 3.5E-17 1.2E-21 138.3 10.1 159 3-184 45-211 (361)
58 3ln6_A Glutathione biosynthesi 99.7 1.4E-17 4.7E-22 152.5 7.0 148 32-189 428-582 (750)
59 1wr2_A Hypothetical protein PH 99.7 1.3E-16 4.4E-21 127.9 11.5 103 84-188 19-130 (238)
60 2r85_A PURP protein PF1517; AT 99.7 8.4E-17 2.9E-21 134.9 10.2 145 12-185 41-186 (334)
61 1z2n_X Inositol 1,3,4-trisphos 99.7 5.1E-16 1.8E-20 129.8 13.0 126 45-188 55-191 (324)
62 3df7_A Putative ATP-grAsp supe 99.7 1.4E-16 4.9E-21 132.1 7.9 117 35-188 61-178 (305)
63 1i7n_A Synapsin II; synapse, p 99.7 1.3E-15 4.5E-20 125.5 13.3 135 44-190 67-213 (309)
64 2pbz_A Hypothetical protein; N 99.6 4E-17 1.4E-21 135.5 -0.8 146 2-185 28-176 (320)
65 2p0a_A Synapsin-3, synapsin II 99.6 4.2E-15 1.4E-19 124.0 11.4 134 45-190 85-230 (344)
66 1gsa_A Glutathione synthetase; 99.6 1.7E-15 5.9E-20 125.8 8.9 131 44-187 78-216 (316)
67 1pk8_A RAT synapsin I; ATP bin 99.6 9.7E-15 3.3E-19 124.0 12.7 134 45-190 180-325 (422)
68 3ufx_B Succinyl-COA synthetase 99.5 7.2E-14 2.5E-18 119.2 8.9 102 86-189 4-109 (397)
69 2q7d_A Inositol-tetrakisphosph 99.5 5.8E-14 2E-18 118.1 7.6 106 69-190 100-219 (346)
70 2nu8_B SCS-beta, succinyl-COA 99.5 1.1E-13 3.7E-18 117.9 8.8 103 85-189 3-117 (388)
71 2fp4_B Succinyl-COA ligase [GD 99.4 3.7E-13 1.3E-17 114.7 8.4 102 86-189 4-124 (395)
72 3t7a_A Inositol pyrophosphate 99.0 2.6E-11 8.9E-16 98.0 -1.3 138 46-193 58-224 (330)
73 3mwd_A ATP-citrate synthase; A 98.2 1.6E-06 5.3E-11 74.3 5.8 105 86-190 7-129 (425)
74 3pff_A ATP-citrate synthase; p 98.0 6E-06 2E-10 76.0 5.1 103 86-190 7-129 (829)
75 3n6r_A Propionyl-COA carboxyla 97.6 9.1E-05 3.1E-09 67.5 7.3 44 201-244 601-644 (681)
76 2kcc_A Acetyl-COA carboxylase 97.5 6.4E-05 2.2E-09 49.4 3.5 32 213-244 6-37 (84)
77 1z6h_A Biotin/lipoyl attachmen 97.4 0.00011 3.9E-09 46.5 3.8 30 215-244 2-31 (72)
78 2dn8_A Acetyl-COA carboxylase 97.4 0.00015 5.3E-09 49.3 4.1 32 213-244 18-49 (100)
79 2d5d_A Methylmalonyl-COA decar 97.3 0.00024 8.1E-09 45.2 3.9 31 214-244 7-37 (74)
80 2jku_A Propionyl-COA carboxyla 97.3 0.00016 5.5E-09 48.6 2.9 32 213-244 26-57 (94)
81 1bdo_A Acetyl-COA carboxylase; 97.2 0.00023 7.9E-09 46.2 3.2 32 213-244 5-43 (80)
82 1dcz_A Transcarboxylase 1.3S s 97.2 0.00045 1.6E-08 44.3 4.4 32 213-244 9-40 (77)
83 3hbl_A Pyruvate carboxylase; T 97.1 0.00051 1.7E-08 66.0 5.7 35 210-244 1075-1109(1150)
84 2ejm_A Methylcrotonoyl-COA car 97.1 0.0004 1.4E-08 47.1 3.7 32 213-244 15-46 (99)
85 3bg3_A Pyruvate carboxylase, m 96.9 0.0011 3.6E-08 60.6 5.2 34 211-244 648-681 (718)
86 1ghj_A E2, E2, the dihydrolipo 96.8 0.00085 2.9E-08 43.3 2.9 29 216-244 11-39 (79)
87 2qf7_A Pyruvate carboxylase pr 96.7 0.0017 5.8E-08 62.6 5.7 34 211-244 1094-1127(1165)
88 2l5t_A Lipoamide acyltransfera 96.7 0.00068 2.3E-08 43.5 2.1 29 216-244 11-39 (77)
89 1gjx_A Pyruvate dehydrogenase; 96.7 0.00093 3.2E-08 43.3 2.7 28 217-244 12-39 (81)
90 3crk_C Dihydrolipoyllysine-res 96.6 0.0013 4.6E-08 43.3 3.2 28 217-244 16-43 (87)
91 3u9t_A MCC alpha, methylcroton 96.6 0.00037 1.3E-08 63.5 0.2 34 211-244 601-634 (675)
92 1k8m_A E2 component of branche 96.4 0.0019 6.6E-08 43.1 2.9 27 218-244 16-42 (93)
93 3va7_A KLLA0E08119P; carboxyla 96.4 0.0024 8.1E-08 61.8 4.4 32 213-244 1168-1199(1236)
94 1bdo_A Acetyl-COA carboxylase; 96.4 0.0033 1.1E-07 40.5 3.8 32 213-244 49-80 (80)
95 2dnc_A Pyruvate dehydrogenase 96.3 0.0024 8.4E-08 43.0 3.1 27 218-244 19-45 (98)
96 2dne_A Dihydrolipoyllysine-res 96.3 0.0027 9.3E-08 43.6 3.0 27 218-244 19-45 (108)
97 2k7v_A Dihydrolipoyllysine-res 96.2 0.00076 2.6E-08 44.3 0.1 31 215-245 42-72 (85)
98 2l5t_A Lipoamide acyltransfera 96.2 0.0043 1.5E-07 39.6 3.6 32 213-244 45-76 (77)
99 1qjo_A Dihydrolipoamide acetyl 96.2 0.0039 1.3E-07 40.2 3.2 34 212-245 43-76 (80)
100 1z6h_A Biotin/lipoyl attachmen 96.2 0.0051 1.7E-07 38.6 3.7 34 212-245 36-69 (72)
101 3tig_A TTL protein; ATP-grAsp, 96.1 0.0098 3.3E-07 50.0 6.3 56 123-187 147-211 (380)
102 1iyu_A E2P, dihydrolipoamide a 96.1 0.0066 2.3E-07 39.0 4.1 33 213-245 42-74 (79)
103 1pmr_A Dihydrolipoyl succinylt 96.0 0.0014 5E-08 42.3 0.6 27 218-244 14-40 (80)
104 1ghj_A E2, E2, the dihydrolipo 96.0 0.0072 2.5E-07 38.8 3.9 33 213-245 45-77 (79)
105 1qjo_A Dihydrolipoamide acetyl 95.9 0.0055 1.9E-07 39.4 3.0 26 220-245 14-39 (80)
106 1dcz_A Transcarboxylase 1.3S s 95.9 0.0071 2.4E-07 38.5 3.5 33 212-244 45-77 (77)
107 2k7v_A Dihydrolipoyllysine-res 95.8 0.0071 2.4E-07 39.5 3.3 31 215-245 5-35 (85)
108 1y8o_B Dihydrolipoyllysine-res 95.8 0.0068 2.3E-07 42.9 3.2 26 219-244 40-65 (128)
109 2d5d_A Methylmalonyl-COA decar 95.7 0.011 3.6E-07 37.3 3.8 32 213-244 43-74 (74)
110 1k8m_A E2 component of branche 95.6 0.011 3.8E-07 39.3 3.7 33 213-245 48-80 (93)
111 3crk_C Dihydrolipoyllysine-res 95.5 0.013 4.6E-07 38.3 3.8 33 213-245 49-82 (87)
112 1zko_A Glycine cleavage system 95.4 0.0077 2.6E-07 43.1 2.3 31 215-245 39-70 (136)
113 3n6x_A Putative glutathionylsp 95.0 0.031 1.1E-06 48.3 5.4 105 61-176 297-411 (474)
114 1gjx_A Pyruvate dehydrogenase; 94.9 0.012 4E-07 37.9 2.1 33 213-245 45-77 (81)
115 1pmr_A Dihydrolipoyl succinylt 94.8 0.011 3.9E-07 38.0 1.8 33 213-245 46-78 (80)
116 1iyu_A E2P, dihydrolipoamide a 94.7 0.02 6.9E-07 36.6 2.8 25 220-245 13-37 (79)
117 2dnc_A Pyruvate dehydrogenase 94.7 0.026 9E-07 37.9 3.4 34 212-245 50-84 (98)
118 2dne_A Dihydrolipoyllysine-res 94.6 0.03 1E-06 38.3 3.6 34 212-245 50-84 (108)
119 1y8o_B Dihydrolipoyllysine-res 94.6 0.031 1.1E-06 39.5 3.7 34 212-245 70-104 (128)
120 2kcc_A Acetyl-COA carboxylase 94.5 0.022 7.6E-07 37.0 2.7 33 212-245 42-74 (84)
121 2jku_A Propionyl-COA carboxyla 94.5 0.0066 2.3E-07 40.5 0.0 32 213-244 63-94 (94)
122 3fpp_A Macrolide-specific effl 94.2 0.032 1.1E-06 46.2 3.6 33 213-245 32-64 (341)
123 1hpc_A H protein of the glycin 94.2 0.024 8.1E-07 40.3 2.3 30 216-245 31-61 (131)
124 2ejm_A Methylcrotonoyl-COA car 93.9 0.042 1.4E-06 36.9 3.1 33 213-245 52-84 (99)
125 3lnn_A Membrane fusion protein 93.7 0.041 1.4E-06 45.9 3.4 33 213-245 58-90 (359)
126 1vf7_A Multidrug resistance pr 93.4 0.045 1.5E-06 46.0 3.1 33 213-245 44-76 (369)
127 2dn8_A Acetyl-COA carboxylase 93.4 0.077 2.6E-06 35.6 3.8 32 213-245 55-86 (100)
128 1onl_A Glycine cleavage system 93.0 0.049 1.7E-06 38.5 2.3 30 216-245 31-61 (128)
129 4dk0_A Putative MACA; alpha-ha 92.9 0.047 1.6E-06 45.6 2.5 33 213-245 33-65 (369)
130 3a7l_A H-protein, glycine clea 92.9 0.053 1.8E-06 38.3 2.3 30 216-245 32-62 (128)
131 2k32_A A; NMR {Campylobacter j 92.8 0.06 2.1E-06 37.1 2.6 32 213-244 68-100 (116)
132 3ne5_B Cation efflux system pr 92.4 0.091 3.1E-06 44.8 3.6 32 213-244 122-154 (413)
133 2io8_A Bifunctional glutathion 91.9 0.044 1.5E-06 49.2 1.2 95 62-176 475-573 (619)
134 1f3z_A EIIA-GLC, glucose-speci 90.9 0.22 7.6E-06 36.5 3.8 20 225-244 97-116 (161)
135 2gpr_A Glucose-permease IIA co 90.5 0.23 8E-06 36.1 3.6 25 220-244 87-111 (154)
136 1ax3_A Iiaglc, glucose permeas 89.2 0.24 8.1E-06 36.4 2.8 27 218-244 90-116 (162)
137 3klr_A Glycine cleavage system 83.7 0.72 2.5E-05 32.2 2.7 27 219-245 30-57 (125)
138 2vob_A Trypanothione synthetas 83.0 1.5 5E-05 39.6 5.1 95 64-176 490-588 (652)
139 3dva_I Dihydrolipoyllysine-res 81.6 0.29 9.8E-06 41.9 0.0 33 213-245 46-78 (428)
140 3ne5_B Cation efflux system pr 81.3 0.85 2.9E-05 38.7 2.9 32 213-244 208-239 (413)
141 3na6_A Succinylglutamate desuc 81.2 1.4 4.9E-05 36.2 4.1 32 212-244 257-288 (331)
142 1zy8_K Pyruvate dehydrogenase 79.6 0.37 1.3E-05 37.5 0.0 32 213-244 47-79 (229)
143 3fmc_A Putative succinylglutam 79.2 1.3 4.4E-05 37.1 3.2 31 213-244 291-321 (368)
144 2f1m_A Acriflavine resistance 79.0 0.94 3.2E-05 36.0 2.2 31 214-244 132-164 (277)
145 3k1t_A Glutamate--cysteine lig 77.1 2.7 9.1E-05 35.2 4.4 65 90-175 265-332 (432)
146 3tzu_A GCVH, glycine cleavage 77.1 2 7E-05 30.4 3.2 27 219-245 47-74 (137)
147 3bg3_A Pyruvate carboxylase, m 77.1 0.78 2.7E-05 41.9 1.3 32 213-244 687-718 (718)
148 2p10_A MLL9387 protein; putati 76.8 27 0.00091 27.9 13.1 126 30-173 106-233 (286)
149 3lnn_A Membrane fusion protein 76.5 1.5 5E-05 36.3 2.8 32 213-244 171-203 (359)
150 3fpp_A Macrolide-specific effl 76.0 1.7 5.7E-05 35.6 3.0 32 213-244 154-188 (341)
151 3mxu_A Glycine cleavage system 75.9 2.2 7.7E-05 30.4 3.2 26 220-245 53-79 (143)
152 3cdx_A Succinylglutamatedesucc 72.3 2.9 9.8E-05 34.7 3.5 31 213-244 268-298 (354)
153 1vf7_A Multidrug resistance pr 70.4 2.1 7.3E-05 35.6 2.3 32 213-244 138-171 (369)
154 2dsj_A Pyrimidine-nucleoside ( 67.3 3.7 0.00013 34.9 3.1 23 221-243 367-389 (423)
155 1brw_A PYNP, protein (pyrimidi 67.2 3.6 0.00012 35.1 3.1 24 220-243 374-397 (433)
156 3h5q_A PYNP, pyrimidine-nucleo 66.5 3.9 0.00013 35.0 3.1 24 220-243 377-400 (436)
157 1uou_A Thymidine phosphorylase 65.1 4.3 0.00015 35.1 3.1 23 221-243 410-432 (474)
158 1vli_A Spore coat polysacchari 64.1 35 0.0012 28.6 8.4 91 61-175 105-195 (385)
159 3hgb_A Glycine cleavage system 64.1 5.8 0.0002 28.7 3.2 25 221-245 59-84 (155)
160 3it5_A Protease LASA; metallop 62.3 4.6 0.00016 30.1 2.5 22 224-245 83-104 (182)
161 2tpt_A Thymidine phosphorylase 62.1 3.6 0.00012 35.2 2.1 24 220-243 379-402 (440)
162 4dk0_A Putative MACA; alpha-ha 61.4 2 6.7E-05 35.6 0.4 26 214-239 156-181 (369)
163 3our_B EIIA, phosphotransferas 58.2 6.5 0.00022 29.2 2.7 28 216-243 110-137 (183)
164 1zko_A Glycine cleavage system 56.0 5.3 0.00018 28.2 1.8 33 213-245 75-114 (136)
165 3tuf_B Stage II sporulation pr 53.9 7.8 0.00027 30.3 2.6 22 224-245 133-154 (245)
166 1qwy_A Peptidoglycan hydrolase 53.9 7.7 0.00026 31.1 2.6 21 224-244 237-257 (291)
167 2lmc_B DNA-directed RNA polyme 53.6 2.6 8.9E-05 27.1 -0.1 18 224-241 65-82 (84)
168 3kzx_A HAD-superfamily hydrola 51.5 41 0.0014 24.8 6.5 118 32-156 106-229 (231)
169 3fs2_A 2-dehydro-3-deoxyphosph 50.3 88 0.003 25.1 8.3 90 61-174 103-193 (298)
170 3nvt_A 3-deoxy-D-arabino-heptu 50.1 54 0.0018 27.4 7.3 113 36-172 160-285 (385)
171 2hsi_A Putative peptidase M23; 48.7 10 0.00034 30.4 2.6 21 224-244 230-250 (282)
172 3nyy_A Putative glycyl-glycine 46.9 12 0.0004 29.5 2.6 19 227-245 183-201 (252)
173 1b04_A Protein (DNA ligase); D 46.8 27 0.00091 28.4 4.8 36 86-122 233-268 (318)
174 2qj8_A MLR6093 protein; struct 46.6 16 0.00054 29.8 3.5 29 214-243 259-287 (332)
175 3sz8_A 2-dehydro-3-deoxyphosph 45.3 98 0.0034 24.6 7.8 90 61-174 82-172 (285)
176 3jsl_A DNA ligase; NAD+-depend 44.8 39 0.0013 27.5 5.5 34 87-121 232-265 (318)
177 3csq_A Morphogenesis protein 1 44.7 10 0.00035 31.1 2.1 20 225-244 250-269 (334)
178 3uq8_A DNA ligase; adenylated 43.1 36 0.0012 27.7 5.1 36 86-122 237-272 (322)
179 3k1z_A Haloacid dehalogenase-l 42.9 47 0.0016 25.4 5.7 121 32-158 109-241 (263)
180 4ep4_A Crossover junction endo 39.5 1.1E+02 0.0036 22.2 8.5 69 35-103 53-139 (166)
181 1iv0_A Hypothetical protein; r 39.3 55 0.0019 21.3 4.7 20 33-52 39-58 (98)
182 2gu1_A Zinc peptidase; alpha/b 39.3 17 0.00058 30.1 2.6 20 225-244 283-302 (361)
183 2wfb_A Putative uncharacterize 39.2 18 0.00062 24.4 2.4 64 8-75 19-93 (120)
184 3umb_A Dehalogenase-like hydro 38.5 1.1E+02 0.0038 22.2 7.1 118 32-154 102-228 (233)
185 3mwd_B ATP-citrate synthase; A 38.2 32 0.0011 28.2 4.1 45 34-78 93-139 (334)
186 2d59_A Hypothetical protein PH 38.1 69 0.0024 22.3 5.5 42 35-78 91-132 (144)
187 3ff4_A Uncharacterized protein 38.0 77 0.0026 21.5 5.5 41 35-77 72-112 (122)
188 4eek_A Beta-phosphoglucomutase 37.9 1.2E+02 0.0043 22.5 8.1 117 32-154 113-246 (259)
189 2pib_A Phosphorylated carbohyd 37.4 67 0.0023 22.9 5.6 118 32-154 87-214 (216)
190 1ta8_A DNA ligase, NAD-depende 36.6 62 0.0021 26.5 5.5 36 86-122 239-274 (332)
191 2yvq_A Carbamoyl-phosphate syn 36.6 37 0.0013 23.8 3.8 18 36-53 87-104 (143)
192 3me7_A Putative uncharacterize 36.2 1.1E+02 0.0038 21.5 7.1 43 85-127 76-118 (170)
193 2duw_A Putative COA-binding pr 35.3 90 0.0031 21.7 5.7 42 35-78 84-125 (145)
194 1u3o_A Huntingtin-associated p 34.8 15 0.00051 23.4 1.2 12 234-245 36-47 (82)
195 3kbb_A Phosphorylated carbohyd 34.5 1.1E+02 0.0036 22.2 6.4 117 33-154 88-214 (216)
196 4ex6_A ALNB; modified rossman 33.8 1.3E+02 0.0043 22.0 6.8 117 32-154 107-234 (237)
197 1zco_A 2-dehydro-3-deoxyphosph 33.6 93 0.0032 24.3 6.0 103 35-156 40-154 (262)
198 1zau_A DNA ligase; AMP; HET: D 33.3 66 0.0023 26.2 5.2 35 87-122 249-283 (328)
199 1b93_A Protein (methylglyoxal 32.3 1.3E+02 0.0044 21.4 6.0 40 35-74 72-117 (152)
200 1y81_A Conserved hypothetical 32.0 1.1E+02 0.0037 21.1 5.6 40 36-77 84-123 (138)
201 1hjr_A Holliday junction resol 31.2 1.4E+02 0.0049 21.3 8.9 69 35-103 49-135 (158)
202 1vmd_A MGS, methylglyoxal synt 31.2 1.3E+02 0.0045 22.1 6.0 40 35-74 88-133 (178)
203 3nas_A Beta-PGM, beta-phosphog 30.8 1.1E+02 0.0036 22.4 5.9 110 32-148 95-208 (233)
204 2auk_A DNA-directed RNA polyme 30.5 25 0.00086 26.2 2.1 20 224-243 62-81 (190)
205 4glw_A DNA ligase; inhibitor, 29.8 92 0.0032 25.0 5.5 33 87-120 227-259 (305)
206 2yx6_A Hypothetical protein PH 29.6 66 0.0023 21.5 4.0 36 36-75 54-89 (121)
207 3qxg_A Inorganic pyrophosphata 29.2 1E+02 0.0036 22.7 5.6 118 32-155 112-241 (243)
208 1o13_A Probable NIFB protein; 28.9 67 0.0023 22.2 4.0 36 36-75 67-102 (136)
209 3g8r_A Probable spore coat pol 28.9 64 0.0022 26.6 4.4 77 61-156 82-158 (350)
210 3ib6_A Uncharacterized protein 28.2 1.6E+02 0.0056 20.9 6.8 124 31-157 36-179 (189)
211 2qkf_A 3-deoxy-D-manno-octulos 28.1 1.4E+02 0.0047 23.7 6.1 40 108-157 115-154 (280)
212 3d4r_A Domain of unknown funct 27.8 40 0.0014 24.5 2.6 31 213-243 101-131 (169)
213 3tml_A 2-dehydro-3-deoxyphosph 27.8 81 0.0028 25.2 4.7 41 108-158 117-157 (288)
214 1vr6_A Phospho-2-dehydro-3-deo 27.7 2.5E+02 0.0087 23.0 9.8 103 36-157 124-238 (350)
215 3ixl_A Amdase, arylmalonate de 27.3 1.7E+02 0.0058 22.3 6.5 61 32-101 162-227 (240)
216 1k92_A Argininosuccinate synth 27.3 1.9E+02 0.0063 24.8 7.1 68 35-103 111-184 (455)
217 3umg_A Haloacid dehalogenase; 27.3 1.8E+02 0.0062 21.2 8.4 117 32-154 119-248 (254)
218 2xw6_A MGS, methylglyoxal synt 27.0 97 0.0033 21.6 4.5 46 35-81 64-115 (134)
219 3e58_A Putative beta-phosphogl 26.8 63 0.0021 23.0 3.8 113 32-149 92-211 (214)
220 2xha_A NUSG, transcription ant 26.8 27 0.00091 26.2 1.6 18 224-241 138-157 (193)
221 3i6i_A Putative leucoanthocyan 26.7 1.8E+02 0.0062 23.1 6.9 72 30-101 68-154 (346)
222 3kal_A Homoglutathione synthet 26.5 81 0.0028 27.3 4.7 45 125-175 384-428 (499)
223 3cin_A MYO-inositol-1-phosphat 26.0 70 0.0024 26.8 4.2 61 43-104 186-246 (394)
224 1qpo_A Quinolinate acid phosph 25.7 56 0.0019 26.0 3.4 25 220-244 69-93 (284)
225 3d0c_A Dihydrodipicolinate syn 25.4 1.9E+02 0.0065 23.1 6.7 90 34-130 35-144 (314)
226 2hgs_A Protein (glutathione sy 25.2 2.1E+02 0.0071 24.6 7.0 56 125-189 360-415 (474)
227 2wqp_A Polysialic acid capsule 24.8 86 0.0029 25.8 4.5 109 30-157 33-172 (349)
228 2owo_A DNA ligase; protein-DNA 24.7 1.1E+02 0.0038 27.6 5.5 36 86-122 238-273 (671)
229 2om6_A Probable phosphoserine 24.6 2E+02 0.0067 20.7 6.7 121 31-154 101-231 (235)
230 3um9_A Haloacid dehalogenase, 24.6 1.8E+02 0.0063 20.8 6.2 117 32-153 99-224 (230)
231 3dv9_A Beta-phosphoglucomutase 24.5 1.6E+02 0.0056 21.4 5.9 120 32-157 111-242 (247)
232 1iuk_A Hypothetical protein TT 24.5 61 0.0021 22.5 3.1 38 38-77 87-124 (140)
233 3lmz_A Putative sugar isomeras 23.8 1.3E+02 0.0046 22.7 5.4 114 32-153 30-152 (257)
234 1zrn_A L-2-haloacid dehalogena 23.7 2E+02 0.0067 20.8 6.2 116 33-154 99-224 (232)
235 4gib_A Beta-phosphoglucomutase 23.7 2.2E+02 0.0077 21.2 6.6 118 32-156 119-241 (250)
236 2q5c_A NTRC family transcripti 23.5 2.2E+02 0.0076 20.9 7.0 16 35-50 132-147 (196)
237 2nyv_A Pgpase, PGP, phosphogly 23.3 2E+02 0.0069 20.9 6.2 117 32-154 86-210 (222)
238 3upl_A Oxidoreductase; rossman 23.1 98 0.0034 26.4 4.7 87 40-128 102-188 (446)
239 1ug1_A KIAA1010 protein; struc 22.9 40 0.0014 21.9 1.7 14 233-246 35-48 (92)
240 2nu8_A Succinyl-COA ligase [AD 22.7 1.3E+02 0.0043 23.8 5.0 31 42-73 61-91 (288)
241 1vs1_A 3-deoxy-7-phosphoheptul 22.4 2.9E+02 0.0098 21.7 7.1 115 36-174 56-183 (276)
242 2auk_A DNA-directed RNA polyme 22.3 51 0.0018 24.5 2.5 22 224-245 166-187 (190)
243 2lxi_A RNA-binding protein 10; 22.1 1.2E+02 0.004 18.9 4.0 45 110-154 13-63 (91)
244 2yv2_A Succinyl-COA synthetase 22.1 1.6E+02 0.0054 23.4 5.5 12 88-99 112-123 (297)
245 3l0g_A Nicotinate-nucleotide p 21.8 70 0.0024 25.7 3.3 24 221-244 83-106 (300)
246 2xhc_A Transcription antitermi 21.7 44 0.0015 27.6 2.1 19 224-242 61-79 (352)
247 2go7_A Hydrolase, haloacid deh 21.7 1.6E+02 0.0055 20.5 5.3 112 32-152 88-204 (207)
248 3paj_A Nicotinate-nucleotide p 20.4 71 0.0024 25.9 3.1 25 220-244 106-130 (320)
249 1o60_A 2-dehydro-3-deoxyphosph 20.4 2.5E+02 0.0086 22.3 6.3 78 61-157 80-157 (292)
250 3ouv_A Serine/threonine protei 20.3 1.1E+02 0.0036 18.2 3.3 23 220-242 44-66 (71)
251 3m9l_A Hydrolase, haloacid deh 20.3 2.4E+02 0.0081 20.0 7.3 115 33-154 74-197 (205)
252 1g2r_A Hypothetical cytosolic 20.2 1.6E+02 0.0053 19.3 4.2 30 125-154 36-65 (100)
No 1
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=100.00 E-value=1.3e-32 Score=245.05 Aligned_cols=186 Identities=32% Similarity=0.509 Sum_probs=168.4
Q ss_pred CCcCCCC--CCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCH
Q psy10619 1 MLFPDPC--VFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTA 78 (246)
Q Consensus 1 ~v~~d~~--~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~ 78 (246)
+||++.| ++++++++||+++.+++.....+|++.+.++++|++.++|+|+|++|+++|+..+++.+++.|++++|+++
T Consensus 93 av~s~~D~~~~a~~~~~ADe~v~i~~~~~~~syld~~~Il~~a~~~~vdaV~pG~GflsEn~~~a~~le~~Gi~~iGp~~ 172 (587)
T 3jrx_A 93 VMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPS 172 (587)
T ss_dssp EEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHHHHHHHTTCSEEECCSSTTTTCTHHHHHHHTTTCEESSCCH
T ss_pred EEecccccCcCChhhHhCCEEEEeCCCCccccccCHHHHHHHHHHhCCCEEEeCCCccccCHHHHHHHHHCCCCeeCCCH
Confidence 3677545 99999999999999988777789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCHHHHHHHHHHhCCCCCCCCc---------------------------cccCCHHHHHHHHHHhCCcEEEEec
Q psy10619 79 ECIRGMGDKLESKKLAKEAGVNIIPGFN---------------------------GIIRDADHCVEIARDIGYPVMIKAS 131 (246)
Q Consensus 79 ~~~~~~~dK~~~~~~l~~~gip~p~~~~---------------------------~~~~~~~~~~~~~~~~~~P~vvKp~ 131 (246)
+++.++.||..++++|+++|||+|++.. ..+.+.+++.++++++|||+||||.
T Consensus 173 ~ai~~~~DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~eea~~~a~~iGyPvVVKp~ 252 (587)
T 3jrx_A 173 EAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKAS 252 (587)
T ss_dssp HHHHHHCSHHHHHHHHHHTTCCBCCBTTTTCCCCC------CCCCCCCCHHHHHTTSCCSHHHHHHHHHHHCSSEEEEET
T ss_pred HHHHHhCCHHHHHHHHHHcCCCCCCeecccccccccccccccccccccchhhccccccCCHHHHHHHHHhcCCeEEEEeC
Confidence 9999999999999999999999999752 1178899999999999999999999
Q ss_pred cCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 132 AGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 132 ~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
.|+||+|++++++.+|+.++++.+.... .+..++||+||++++|++|++++|+.+
T Consensus 253 ~GgGGkGv~iV~s~eEL~~a~~~a~~~~----~~~~vlVEeyI~g~rei~V~vl~D~~G 307 (587)
T 3jrx_A 253 EGGGGKGIRKAESAEDFPILFRQVQSEI----PGSPIFLMKLAQHARHLEVQILADQYG 307 (587)
T ss_dssp TCCSSSSEEEECSTTTHHHHHHHHHHHS----TTCCEEEEECCCSCEEEEEEEEECSSS
T ss_pred CCCCCCCeEEeCCHHHHHHHHHHHHhhc----cCCCEEEEEecCCCcEEEEEEEEcCCC
Confidence 9999999999999999999998876532 247899999999559999999998743
No 2
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=100.00 E-value=1.6e-32 Score=243.55 Aligned_cols=186 Identities=32% Similarity=0.509 Sum_probs=161.0
Q ss_pred CCcCCCC--CCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCH
Q psy10619 1 MLFPDPC--VFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTA 78 (246)
Q Consensus 1 ~v~~d~~--~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~ 78 (246)
+||++.| ++++++++||+++.+++.....+|++.+.++++|++.++|+|+|++|+++|+..+++.+++.|++++|+++
T Consensus 77 av~s~~D~~~~a~~~~~ADe~~~i~~~~~~~sy~d~~~ii~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~ 156 (540)
T 3glk_A 77 VMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPS 156 (540)
T ss_dssp EEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHHHHHHHTTCSEEECCSSGGGGCTHHHHHHHHTTCEESSCCH
T ss_pred EEEcCcccCcCChhHHhCCEEEEeCCCCcccccccHHHHHHHHHHhCCCEEEeCCCccccCHHHHHHHHHcCCceeCCCH
Confidence 3677445 99999999999999988777789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCHHHHHHHHHHhCCCCCCCCc---------------------------cccCCHHHHHHHHHHhCCcEEEEec
Q psy10619 79 ECIRGMGDKLESKKLAKEAGVNIIPGFN---------------------------GIIRDADHCVEIARDIGYPVMIKAS 131 (246)
Q Consensus 79 ~~~~~~~dK~~~~~~l~~~gip~p~~~~---------------------------~~~~~~~~~~~~~~~~~~P~vvKp~ 131 (246)
+++.++.||..+|++|+++|||+|++.. ..+.+.+++.++++++|||+||||.
T Consensus 157 ~ai~~~~DK~~~k~ll~~~GVPvp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~ea~~~a~~igyPvVVKp~ 236 (540)
T 3glk_A 157 EAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDDLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKAS 236 (540)
T ss_dssp HHHC---CHHHHHHHHHHTTCCBCCBTTTTCCCCCCCTTC----CCCCCHHHHHHTSCCSHHHHHHHHHHHCSSEEEEET
T ss_pred HHHHHhCCHHHHHHHHHHcCCCCCCcccccccccccccccccccccccccccccccCcCCHHHHHHHHHhcCCcEEEEEC
Confidence 9999999999999999999999999752 1178899999999999999999999
Q ss_pred cCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 132 AGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 132 ~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
.|+||+|++++++.+|+.++++.+.... .+..++||+||++++|++|++++|+.+
T Consensus 237 ~ggGG~Gv~iv~~~~eL~~a~~~~~~~~----~~~~vlVEe~I~g~rei~V~vl~d~~G 291 (540)
T 3glk_A 237 EGGGGKGIRKAESAEDFPILFRQVQSEI----PGSPIFLMKLAQHARHLEVQILADQYG 291 (540)
T ss_dssp TCC----EEEECSTTTHHHHHHHHHHHS----TTCCEEEEECCSSEEEEEEEEEECTTS
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHhhc----cCCCEEEEEecCCCcEEEEEEEEcCCC
Confidence 9999999999999999999998876532 246899999999559999999998643
No 3
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=100.00 E-value=8.3e-32 Score=235.35 Aligned_cols=190 Identities=40% Similarity=0.735 Sum_probs=173.7
Q ss_pred CCcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHH
Q psy10619 1 MLFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAEC 80 (246)
Q Consensus 1 ~v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~ 80 (246)
+|+++.++++++.++||+++.+++.....+|.+.+.++++++++++|+|+|++++.+|+..+++.+++.|++++|+++++
T Consensus 34 ~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~i~p~~g~~~e~~~~~~~~~~~g~~~~g~~~~~ 113 (446)
T 3ouz_A 34 CVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAEADAIFPGYGFLSENQNFVEICAKHNIKFIGPSVEA 113 (446)
T ss_dssp EEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSEEECCSSTTTTCHHHHHHHHHTTCEESSCCHHH
T ss_pred EEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCEEEECCcccccCHHHHHHHHHCCCceECcCHHH
Confidence 35778899999999999999887777778899999999999999999999999998999999999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHH
Q psy10619 81 IRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAA 160 (246)
Q Consensus 81 ~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~ 160 (246)
+.+++||..++++|+++|||+|+++...+.+.+++.++++++|||+|+||..|+||+|++++++.+|+.+++..+...+.
T Consensus 114 ~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~~~e~~~~~~~~g~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~ 193 (446)
T 3ouz_A 114 MNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKAAAGGGGRGMRVVENEKDLEKAYWSAESEAM 193 (446)
T ss_dssp HHHHHSHHHHHHHHHHTTCCBCSBCSSSCCSHHHHHHHHHHHCSSEEEEETTCCTTCSEEEECSGGGHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHcCCCcCCCcccCCCCHHHHHHHHHHhCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999742357899999999999999999999999999999999999999999999887766
Q ss_pred hhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 161 ASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 161 ~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
..+++..+++|+||++++|+++++++++.+
T Consensus 194 ~~~~~~~~lvEe~i~g~~e~~v~v~~d~~g 223 (446)
T 3ouz_A 194 TAFGDGTMYMEKYIQNPRHIEVQVIGDSFG 223 (446)
T ss_dssp HHHSCCCEEEEECCSSCEEEEEEEEECTTS
T ss_pred HhcCCCCEEEEeCCCCCcEEEEEEEEcCCC
Confidence 666678899999999558999999988753
No 4
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=99.98 E-value=1.8e-32 Score=249.14 Aligned_cols=190 Identities=61% Similarity=0.953 Sum_probs=114.1
Q ss_pred CCcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHH
Q psy10619 1 MLFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAEC 80 (246)
Q Consensus 1 ~v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~ 80 (246)
+||+|.|+++++.++||+++.+++.....+|++.+.++++++++++|+|+|++|+++|+..+++.+++.|++++|+++++
T Consensus 30 av~sd~d~~a~~~~~aD~~~~i~p~~~~~syld~~~i~~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~a 109 (681)
T 3n6r_A 30 AIYSDADKQALHVQMADEAVHIGPPPANQSYIVIDKVMAAIRATGAQAVHPGYGFLSENSKFAEALEAEGVIFVGPPKGA 109 (681)
T ss_dssp CEECSTTSSCHHHHHSSCCEECSSSSGGGTTSCHHHHHHHHHHTCCSCCBCCSSSSTTCHHHHHHHHTTTCCCSSSCHHH
T ss_pred EEEcCCCCCChhHHhCCEEEEcCCCCcccCccCHHHHHHHHHHhCcCEEEECCCccccCHHHHHHHHHcCCceECCCHHH
Confidence 47889999999999999999998877778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHH
Q psy10619 81 IRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAA 160 (246)
Q Consensus 81 ~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~ 160 (246)
+..+.||..++++|+++|||+|+++...+.+.+++.++++++|||+|+||..|+||+|+++++|.+|+.++++.+...+.
T Consensus 110 i~~~~dK~~~k~~l~~~GVPvpp~~~~~~~s~~e~~~~a~~igyPvVvKp~~ggggkGv~iv~~~~el~~a~~~~~~ea~ 189 (681)
T 3n6r_A 110 IEAMGDKITSKKIAQEANVSTVPGYMGLIEDADEAVKISNQIGYPVMIKASAGGGGKGMRIAWNDQEAREGFQSSKNEAA 189 (681)
T ss_dssp HHHTTSHHHHHHHHHTTTCCCCCC--------------------------------------------------------
T ss_pred HHHhCCHHHHHHHHHHcCcCcCCccccCcCCHHHHHHHHHhcCCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999754467889999999999999999999999999999999999999999998877665
Q ss_pred hhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 161 ASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 161 ~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
..+++..++||+||++++|+++++++|+.+
T Consensus 190 ~~fg~~~vlvEe~I~g~rei~V~v~~d~~G 219 (681)
T 3n6r_A 190 NSFGDDRIFIEKFVTQPRHIEIQVLCDSHG 219 (681)
T ss_dssp -------------CCSCEEEEEEEECCSSS
T ss_pred HhCCCCcEEEEeccCCCcEEEEEEEEeCCC
Confidence 566678899999999668999999998754
No 5
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=99.97 E-value=3.4e-32 Score=247.15 Aligned_cols=190 Identities=45% Similarity=0.732 Sum_probs=163.1
Q ss_pred CCcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHH
Q psy10619 1 MLFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAEC 80 (246)
Q Consensus 1 ~v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~ 80 (246)
+||+|.|+++++.++||+++.+++.....+|++.+.+++++++.++|+|+|++|+++|+..+++.+++.|++++|+++++
T Consensus 56 av~s~~d~~a~~~~~AD~~~~i~~~~~~~syld~~~i~~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~a 135 (675)
T 3u9t_A 56 AVHSDIDRHARHVAEADIAVDLGGAKPADSYLRGDRIIAAALASGAQAIHPGYGFLSENADFARACEEAGLLFLGPPAAA 135 (675)
T ss_dssp EEECSGGGGCHHHHTCSEEEECCCSSGGGTTTCHHHHHHHHHHTTCSEEECCSSTTTTCHHHHHHHHTTTCEESSCCHHH
T ss_pred EEECCCCCCchhHhhCCEEEEcCCCccccCccCHHHHHHHHHHhCcCEEEeCCcccccCHHHHHHHHHcCCceeCCCHHH
Confidence 46889999999999999999998877778999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHH
Q psy10619 81 IRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAA 160 (246)
Q Consensus 81 ~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~ 160 (246)
+..+.||..++++|+++|||+|+++...+.+.+++.++++++|||+||||..|+||+|++++++.+|+.++++.+...+.
T Consensus 136 i~~~~DK~~~k~~l~~~GVpvpp~~~~~~~s~~e~~~~a~~igyPvvvKp~~G~Gg~Gv~iv~~~~el~~a~~~~~~ea~ 215 (675)
T 3u9t_A 136 IDAMGSKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIGYPVLLKAAAGGGGKGMKVVEREAELAEALSSAQREAK 215 (675)
T ss_dssp HHHHTSHHHHHHHHHHTTCCBCCCCCSCCCCTTHHHHHHHHSCSSBCCBCCC------CCCBCCTTTHHHHHSCCCC---
T ss_pred HHHhchHHHHHHHHHHcCcCcCCccccCCCCHHHHHHHHHhCCCcEEEEECCCCCCccEEEECCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999764447889999999999999999999999999999999999999999987665544
Q ss_pred hhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 161 ASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 161 ~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
..+++..++||+||++.+|+++++++|+.+
T Consensus 216 ~~fg~~~vlvEeyI~g~reiev~v~~d~~G 245 (675)
T 3u9t_A 216 AAFGDARMLVEKYLLKPRHVEIQVFADRHG 245 (675)
T ss_dssp -----CCCBCCBCCSSCBCEEEEEEECSSS
T ss_pred HhcCCCcEEEEeecCCCcEEEEEEEEcCCC
Confidence 455567899999999669999999998654
No 6
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=99.97 E-value=9.7e-30 Score=222.56 Aligned_cols=187 Identities=42% Similarity=0.753 Sum_probs=165.9
Q ss_pred CcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHH
Q psy10619 2 LFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECI 81 (246)
Q Consensus 2 v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~ 81 (246)
++++.++++++.++||+.+.+++.....+|.+.+.++++++++++|+|++++++.+|+..+++.+++.|++++|++.+++
T Consensus 30 v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~v~~~~g~~~e~~~~~~~~~~~gi~~~g~~~~~~ 109 (451)
T 2vpq_A 30 IYSEGDKDALHTQIADEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPGYGFLAENADFAELCEACQLKFIGPSYQSI 109 (451)
T ss_dssp EEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHTTCSEEECCSSTTTTCHHHHHHHHTTTCEESSSCHHHH
T ss_pred EecccccccchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEECCCccccCHHHHHHHHHcCCeEECCCHHHH
Confidence 45667788899999999998876666678899999999999999999999998888888888999999999999999999
Q ss_pred HHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHh
Q psy10619 82 RGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAA 161 (246)
Q Consensus 82 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~ 161 (246)
.+++||..++++|+++|||+|+++...+.+.+++.+++++++||+||||..++||+|+.++++.+|+.++++.+......
T Consensus 110 ~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~ 189 (451)
T 2vpq_A 110 QKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATAGGGGKGIRVARDEKELETGFRMTEQEAQT 189 (451)
T ss_dssp HHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHCSSEEEEETTCCTTCSEEEESSHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHHhcCCcEEEEECCCCCCCCEEEeCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999996422578999999999999999999999999999999999999999999887765444
Q ss_pred hcCCCceEEEecccCcceEEEEeeecc
Q psy10619 162 SFGDDRILVEKFIKNPRHIEIQGTTYK 188 (246)
Q Consensus 162 ~~~~~~~lve~~i~~g~e~~v~v~~d~ 188 (246)
.+++..++||+||++++|+++.+++++
T Consensus 190 ~~~~~~~lvEe~i~g~~e~~v~v~~~~ 216 (451)
T 2vpq_A 190 AFGNGGLYMEKFIENFRHIEIQIVGDS 216 (451)
T ss_dssp HHSCCCEEEEECCCSEEEEEEEEEECT
T ss_pred hcCCCcEEEEEecCCCeEEEEEEEEcC
Confidence 455678999999995589999999875
No 7
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=99.97 E-value=1.4e-29 Score=221.60 Aligned_cols=186 Identities=46% Similarity=0.820 Sum_probs=164.9
Q ss_pred CcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHH
Q psy10619 2 LFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECI 81 (246)
Q Consensus 2 v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~ 81 (246)
++++.++.+++.++||+.+.+++. ...+|.+.+.++++++++++|+|++++|+.+|+..+++.+++.|++++|++++++
T Consensus 31 v~~~~~~~~~~~~~ad~~~~~~p~-~~~~~~d~~~l~~~~~~~~~d~v~~~~g~~~e~~~~~~~~~~~gi~~~g~~~~~~ 109 (451)
T 1ulz_A 31 IYNEVESTARHVKLADEAYMIGTD-PLDTYLNKQRIINLALEVGADAIHPGYGFLAENAEFAKMCEEAGITFIGPHWKVI 109 (451)
T ss_dssp EECGGGTTCHHHHHSSEEEECCSS-TTHHHHCHHHHHHHHHHTTCCEEECCSSTTTTCHHHHHHHHHTTCEESSSCHHHH
T ss_pred EechhhcccchhhhCcEEEEcCCC-cccccCCHHHHHHHHHHcCCCEEEECCCccccCHHHHHHHHHCCCeEECcCHHHH
Confidence 456777889999999999988654 5557888999999999999999999998888888888999999999999999999
Q ss_pred HHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHh
Q psy10619 82 RGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAA 161 (246)
Q Consensus 82 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~ 161 (246)
.+++||..++++|+++|||+|+++...+.+.+++.+++++++||+||||..++||+|++++++.+|+.++++.+...+..
T Consensus 110 ~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~ 189 (451)
T 1ulz_A 110 ELMGDKARSKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIGYPVLLKATAGGGGRGIRICRNEEELVKNYEQASREAEK 189 (451)
T ss_dssp HHHHSHHHHHHHHHHTTCCBCCBCSSSCCCHHHHHHHHHHHCSSEEEEECSSSSCCSCEEESSHHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHcCCCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999996412478999999999999999999999999999999999999999999888765444
Q ss_pred hcCCCceEEEecccCcceEEEEeeecc
Q psy10619 162 SFGDDRILVEKFIKNPRHIEIQGTTYK 188 (246)
Q Consensus 162 ~~~~~~~lve~~i~~g~e~~v~v~~d~ 188 (246)
.+++..++||+||++++|+++.++++.
T Consensus 190 ~~~~~~~lvEe~i~g~~e~~v~v~~~~ 216 (451)
T 1ulz_A 190 AFGRGDLLLEKFIENPKHIEYQVLGDK 216 (451)
T ss_dssp TTSCCCEEEEECCCSCEEEEEEEEECT
T ss_pred hcCCCeEEEEEcccCCeEEEEEEEEcC
Confidence 555678999999996589999999875
No 8
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=99.97 E-value=1.3e-29 Score=221.65 Aligned_cols=187 Identities=47% Similarity=0.779 Sum_probs=164.9
Q ss_pred CcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHH
Q psy10619 2 LFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECI 81 (246)
Q Consensus 2 v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~ 81 (246)
++++.++++++.++||+.+.+++.....+|.+.+.++++++++++|+|++++|+.+|+..+++.+++.|++++|++++++
T Consensus 31 v~~~~~~~~~~~~~ad~~~~~~p~~~~~~~~d~~~l~~~~~~~~~d~v~~~~g~~~e~~~~~~~~e~~gi~~~g~~~~~~ 110 (449)
T 2w70_A 31 VHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETI 110 (449)
T ss_dssp EEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCCEEECCSSTTTTCHHHHHHHHHTTCEESSSCHHHH
T ss_pred EeccccccCchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEECCCCcccCHHHHHHHHHcCCceECCCHHHH
Confidence 45667788899999999998865556668899999999999999999999998888888888999999999999999999
Q ss_pred HHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHH-HHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHH
Q psy10619 82 RGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHC-VEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAA 160 (246)
Q Consensus 82 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~-~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~ 160 (246)
.+++||..++++|+++|||+|+++...+.+.+++ .+++++++||+|+||..++||+|+.+++|.+|+.++++.+...+.
T Consensus 111 ~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~g~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~ 190 (449)
T 2w70_A 111 RLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAK 190 (449)
T ss_dssp HHHHSHHHHHHHHHHHTCCBCSBCSSCCCSCHHHHHHHHHHHCSSEEEEETTCCTTTTCEEECSHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHcCCCcCCCcccccCCHHHHHHHHHHHhCCcEEEEECCCCCCCCEEEeCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999641246788888 888899999999999999999999999999999999988776544
Q ss_pred hhcCCCceEEEecccCcceEEEEeeecc
Q psy10619 161 ASFGDDRILVEKFIKNPRHIEIQGTTYK 188 (246)
Q Consensus 161 ~~~~~~~~lve~~i~~g~e~~v~v~~d~ 188 (246)
..+++..++||+||++++|+++.++++.
T Consensus 191 ~~~~~~~~lvEe~i~g~~e~~v~~~~~~ 218 (449)
T 2w70_A 191 AAFSNDMVYMEKYLENPRHVEIQVLADG 218 (449)
T ss_dssp HHHSCCCEEEEECCSSCEEEEEEEEECT
T ss_pred hhcCCCcEEEEeccCCCeEEEEEEEEcC
Confidence 4455678999999996689999999874
No 9
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=99.97 E-value=5.9e-29 Score=218.16 Aligned_cols=188 Identities=40% Similarity=0.724 Sum_probs=164.3
Q ss_pred CcCCCCCCChhhhccceeEEcCCCCcC-CCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHH
Q psy10619 2 LFPDPCVFQRHVKLADEAVCIGPPVAA-QSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAEC 80 (246)
Q Consensus 2 v~~d~~~~~~~~~~ad~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~ 80 (246)
++++.+..+++.++||+.+.+++...+ .+|.+.+.++++++++++|+|++++|+.+|+..+++.+++.|++++|+++++
T Consensus 35 v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~y~d~~~l~~~~~~~~id~v~~~~g~~~E~~~~~~~~~~~gi~~~g~~~~~ 114 (461)
T 2dzd_A 35 IYSKEDVGSYHRYKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDVDAIHPGYGFLSENIQFAKRCREEGIIFIGPNENH 114 (461)
T ss_dssp EECGGGTTCTHHHHSSSEEECSTTSCTTGGGTCHHHHHHHHHHTTCCEEECCSSSSTTCHHHHHHHHHTTCEESSCCHHH
T ss_pred EECCcccccchhhhCCEEEEcCCCCCccccccCHHHHHHHHHHhCCCEEEECCCccccCHHHHHHHHHcCCEEECCCHHH
Confidence 456667778899999999988754232 4578899999999999999999999888888888899999999999999999
Q ss_pred HHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHH
Q psy10619 81 IRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAA 160 (246)
Q Consensus 81 ~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~ 160 (246)
+.+++||..++++|+++|||+|+++...+.+.+++.+++++++||+|+||..++||+|++++++.+|+.++++.+...+.
T Consensus 115 ~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~ 194 (461)
T 2dzd_A 115 LDMFGDKVKARHAAVNAGIPVIPGSDGPVDGLEDVVAFAEAHGYPIIIKAALGGGGRGMRIVRSKSEVKEAFERAKSEAK 194 (461)
T ss_dssp HHHTTSHHHHHHHHHHTTCCBCCBCSSCCSSHHHHHHHHHHHCSCEEEEESTTCSSSSEEEECCGGGHHHHHHHHHHHHH
T ss_pred HHHhhCHHHHHHHHHHcCCCCCCCcccCcCCHHHHHHHHHhcCCcEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999642247899999999999999999999999999999999999999999998876544
Q ss_pred hhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 161 ASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 161 ~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
..+++..++||+||++++|+++.+++++.
T Consensus 195 ~~~~~~~~lvEe~i~g~~e~~v~v~~~~~ 223 (461)
T 2dzd_A 195 AAFGSDEVYVEKLIENPKHIEVQILGDYE 223 (461)
T ss_dssp HHTSCCCEEEEECCCSCEEEEEEEEECTT
T ss_pred hhcCCCcEEEEECCCCCeEEEEEEEEcCC
Confidence 44556789999999966899999998753
No 10
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=99.97 E-value=2.4e-29 Score=224.94 Aligned_cols=181 Identities=32% Similarity=0.536 Sum_probs=162.0
Q ss_pred CCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcC--CeEeCCCHHHHH
Q psy10619 5 DPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEG--VVFIGPTAECIR 82 (246)
Q Consensus 5 d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g--~~~~g~~~~~~~ 82 (246)
|.++++++.++||+++.+|+.....+|.+.+.++++++++++|+|++++|+++|+..+...+++.| ++++|++.+++.
T Consensus 90 D~~~~~~~~~~aD~~~~ip~~~~~~~y~d~~~l~~~a~~~~id~Vi~g~G~~sE~~~~~~~l~~~g~~i~~~gp~~~a~~ 169 (554)
T 1w96_A 90 DLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMR 169 (554)
T ss_dssp HHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHHHHHHHTTCSEEECCSSTTTTCTHHHHHHHHSTTCCEESSCCHHHHH
T ss_pred ccccCChhhhhCCEEEEcCCCCccccccCHHHHHHHHHHhCCCEEEECCCccccCHHHHHHHHHcCCeEEEeCCCHHHHH
Confidence 456889999999999999876667789999999999999999999999998889888888999999 999999999999
Q ss_pred HhcCHHHHHHHHHHhCCCCCCCCcc------------------------ccCCHHHHHHHHHHhCCcEEEEeccCCCCce
Q psy10619 83 GMGDKLESKKLAKEAGVNIIPGFNG------------------------IIRDADHCVEIARDIGYPVMIKASAGGGGKG 138 (246)
Q Consensus 83 ~~~dK~~~~~~l~~~gip~p~~~~~------------------------~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~g 138 (246)
+++||..++++|+++|||+|++... .+.+.+++.+++++++||+||||..++||+|
T Consensus 170 ~~~dK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~l~~ip~~~~~~~~~~~~~e~~~~~~~~g~PvVvKp~~g~gg~G 249 (554)
T 1w96_A 170 SLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKG 249 (554)
T ss_dssp HSCSHHHHHHHHHHTTCCBCCBTTTTCCCCEECTTTCCEECCHHHHGGGSCSSHHHHHHHHHHHCSSEEEEETTCCTTTT
T ss_pred HHhCHHHHHHHHHHCCCCcCCccccccccccccccccccccccccccccCCCCHHHHHHHHHHcCCCEEEEECCCCCCce
Confidence 9999999999999999999997521 1378899988889999999999999999999
Q ss_pred eEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 139 MRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 139 v~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
++++++.+|+..+++.+.... ....++||+||++++|+++++++++.
T Consensus 250 v~~v~~~~el~~a~~~~~~~~----~~~~vlvEe~i~g~~e~sv~vl~d~~ 296 (554)
T 1w96_A 250 IRQVEREEDFIALYHQAANEI----PGSPIFIMKLAGRARHLEVQLLADQY 296 (554)
T ss_dssp EEEECSHHHHHHHHHHHHHHS----TTCCEEEEECCCSCEEEEEEEEECTT
T ss_pred EEEECCHHHHHHHHHHHHhhc----cCCCEEEEEecCCCcEEEEEEEEcCC
Confidence 999999999999998876531 24689999999977899999999864
No 11
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=99.96 E-value=7.3e-30 Score=243.01 Aligned_cols=189 Identities=39% Similarity=0.739 Sum_probs=110.7
Q ss_pred CCcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHH
Q psy10619 1 MLFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAEC 80 (246)
Q Consensus 1 ~v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~ 80 (246)
+||++.|+++++.++||+++.+++.....+|++.+.++++++++++|+|++++++++|+..+++.+++.|++++|+++++
T Consensus 59 aV~s~~d~~a~~~~~ADe~~~i~p~~~~~syld~~~Il~~a~~~~iDaI~pg~g~lsEn~~~a~~le~~Gi~~iGps~ea 138 (1236)
T 3va7_A 59 AVYSDPDKYSQHVTDADFSVALHGRTAAETYLDIDKIINAAKKTGAQAIIPGYGFLSENADFSDRCSQENIVFVGPSGDA 138 (1236)
T ss_dssp EEECSGGGGCHHHHHSSEEEECCCSSTTTTTTCHHHHHHHHHHTTCSEEECCSSGGGGCHHHHHHHHTTTCEESSCCHHH
T ss_pred EEEcCCCcCchhhhhCCEEEEeCCCcccccccCHHHHHHHHHHhCCCEEEECCccccccHHHHHHHHHCCCCeeCCCHHH
Confidence 46889999999999999999998777778899999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHH
Q psy10619 81 IRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAA 160 (246)
Q Consensus 81 ~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~ 160 (246)
+.++.||..+|++|+++|||+|+++ ..+.+.+++.++++++|||+||||..++||+|+++++|.+|+.++++.+...+.
T Consensus 139 i~~~~DK~~ak~ll~~aGIPvpp~~-~~v~s~eea~~~a~~iGyPvVVKP~~GgGGkGV~iv~s~eEL~~a~~~~~~~a~ 217 (1236)
T 3va7_A 139 IRKLGLKHSAREIAERAKVPLVPGS-GLIKDAKEAKEVAKKLEYPVMVKSTAGGGGIGLQKVDSEDDIERVFETVQHQGK 217 (1236)
T ss_dssp HHHHHSTTHHHHHHHHTTCCCCC---------------------------------------------------------
T ss_pred HHHhcCHHHHHHHHHHcCCCCCCee-EecCCHHHHHHHHHHcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999964 367889999999999999999999999999999999999999999988776544
Q ss_pred hhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 161 ASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 161 ~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
..+++..++||+||++++|++|++++|+.+
T Consensus 218 ~~~~~~~vlVEeyI~G~rEisV~vl~Dg~g 247 (1236)
T 3va7_A 218 SYFGDAGVFMERFVNNARHVEIQMMGDGFG 247 (1236)
T ss_dssp ---------------CCEEEEEEEEEESSS
T ss_pred hccCCCcEEEeeccCCCeEEEEEEEecCCc
Confidence 445567899999999559999999998764
No 12
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=99.96 E-value=1.5e-29 Score=240.33 Aligned_cols=190 Identities=41% Similarity=0.735 Sum_probs=158.8
Q ss_pred CCcCCCCCCChhhhccceeEEcCCCCc-CCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHH
Q psy10619 1 MLFPDPCVFQRHVKLADEAVCIGPPVA-AQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAE 79 (246)
Q Consensus 1 ~v~~d~~~~~~~~~~ad~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~ 79 (246)
+|+++.|..+.+.++||+++.+|+... ..+|++.+.++++++++++|+|+|++|+++|+..+++.+++.|++++|++++
T Consensus 32 av~s~~d~~s~~~~~ADe~~~ig~~~~~~~syld~~~Ii~~a~~~~~DaI~pg~gflsE~~~~a~~le~~Gi~~iGp~~e 111 (1150)
T 3hbl_A 32 AIYSNEDKSSLHRYKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEGIKFIGPHLE 111 (1150)
T ss_dssp EEECGGGTTCGGGGTSSEEEECCTTSCTTGGGTCHHHHHHHHHHTTCSEEECTTTTSTTCHHHHHHHHHTTCEESSSCHH
T ss_pred EEEcCCcccchhhhhcceeeecCCCCCccccccCHHHHHHHHHHhCCCEEEECCCcccccHHHHHHHHHCCCCeeCCCHH
Confidence 467889999999999999999986533 3679999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHH
Q psy10619 80 CIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEA 159 (246)
Q Consensus 80 ~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~ 159 (246)
++.++.||..++++|+++|||+|+++...+.+.+++.++++++|||+||||..|+||+|++++++.+|+.+++..+...+
T Consensus 112 ai~~~~DK~~~r~ll~~aGIPvpp~~~~~v~s~eea~~~a~~iGyPvVVKP~~GgGg~Gv~vv~s~eeL~~a~~~a~~~a 191 (1150)
T 3hbl_A 112 HLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEA 191 (1150)
T ss_dssp HHHHHHSHHHHHHHHHHTTCCBCCBCSSCBCSSSTTTTTGGGTCSSEEEECCC-------CEECCSSSCTHHHHSSSSSC
T ss_pred HHHHhCCHHHHHHHHHHcCcCCCCccccCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999976335788888888888999999999999999999999999999999998765433
Q ss_pred HhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 160 AASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 160 ~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
...+++..++||+||++.+|++|++++|+.+
T Consensus 192 ~~~fg~~~vlVEeyI~G~reieV~vl~d~~G 222 (1150)
T 3hbl_A 192 EKSFGNSEVYIERYIDNPKHIEVQVIGDEHG 222 (1150)
T ss_dssp C------CBEEECCCSSCEEEEEEEEECSSS
T ss_pred HhhcCCCcEEEEEccCCCcEEEEEEEEeCCC
Confidence 3334467899999999558999999998754
No 13
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=99.96 E-value=3.8e-29 Score=238.03 Aligned_cols=190 Identities=35% Similarity=0.640 Sum_probs=110.2
Q ss_pred CCcCCCCCCChhhhccceeEEcCCC-------CcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeE
Q psy10619 1 MLFPDPCVFQRHVKLADEAVCIGPP-------VAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVF 73 (246)
Q Consensus 1 ~v~~d~~~~~~~~~~ad~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~ 73 (246)
+|+++.|..+++.++||+++.+++. ....+|++.+.++++++++++|+|+|++|+++|+..+++.|++.|+++
T Consensus 42 av~s~~d~~a~~~~~ADe~~~i~~~~~~~~~~~~~~~yld~~~I~~~a~~~~iD~V~pg~g~lsE~~~~a~~le~~Gi~~ 121 (1165)
T 2qf7_A 42 AIWAEEDKLALHRFKADESYQVGRGPHLARDLGPIESYLSIDEVIRVAKLSGADAIHPGYGLLSESPEFVDACNKAGIIF 121 (1165)
T ss_dssp EEECGGGTTCHHHHSSSSEEECSCSTTSSSCCCTTHHHHCHHHHHHHHHHHTCSEEECCSSTTTTCHHHHHHHHHTTCEE
T ss_pred EEECCCcccchhHHhCCEEEEcCCcccccccCCccccccCHHHHHHHHHHhCCCEEEECCCchhcCHHHHHHHHHcCCce
Confidence 3677888888999999999999764 233568899999999999999999999999999998999999999999
Q ss_pred eCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHH
Q psy10619 74 IGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFK 153 (246)
Q Consensus 74 ~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~ 153 (246)
+|++++++.++.||..++++|+++|||+|+++...+.+.+++.++++++|||+||||..++||+|+++++|.+|+.++++
T Consensus 122 iGp~~~ai~~~~DK~~~k~~l~~~GIPvp~~~~~~v~s~eea~~~a~~igyPvVVKp~~g~GG~Gv~iv~s~eEL~~a~~ 201 (1165)
T 2qf7_A 122 IGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDDMAEVAKMAAAIGYPVMLKASWGGGGRGMRVIRSEADLAKEVT 201 (1165)
T ss_dssp SSCCHHHHHHHHSHHHHHHHHHHTTCCBC---------------------------------------------------
T ss_pred ECCCHHHHHHHCCHHHHHHHHHHcCCCCCCeeCcCCCCHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999974224678888888889999999999999999999999999999999998
Q ss_pred HHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 154 LSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 154 ~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
.+...+...+++..++||+||++|+|++|++++|+.+
T Consensus 202 ~~~~~a~~~fg~~~vlVEefI~gg~EisV~vl~D~~G 238 (1165)
T 2qf7_A 202 EAKREAMAAFGKDEVYLEKLVERARHVESQILGDTHG 238 (1165)
T ss_dssp ------------------CCCSSEEEEEEEEEECTTS
T ss_pred HHHHHHHhhcCCCcEEEEEeccCCcEEEEEEEEcCCC
Confidence 8766544445567899999999889999999998754
No 14
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=99.94 E-value=9.5e-26 Score=194.51 Aligned_cols=166 Identities=26% Similarity=0.375 Sum_probs=140.5
Q ss_pred CCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhc
Q psy10619 6 PCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMG 85 (246)
Q Consensus 6 ~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~ 85 (246)
.++++++.++||+++.++ +.+.+.++++++++++|+|+++ ++..+...+++.+++.|+ +|++++++.+++
T Consensus 39 ~~~~~~~~~~ad~~~~~~-------~~d~~~l~~~~~~~~~d~v~~~-~~~~~~~~~a~~~~~~gl--~g~~~~~~~~~~ 108 (403)
T 4dim_A 39 PNAHKPCLNLADEISYMD-------ISNPDEVEQKVKDLNLDGAATC-CLDTGIVSLARICDKENL--VGLNEEAAIMCG 108 (403)
T ss_dssp SSCCHHHHHHCSEEEECC-------TTCHHHHHHHTTTSCCSEEECC-SCSTTHHHHHHHHHHHTC--SSCCHHHHHHHH
T ss_pred CCCCCcchhhCCeEEEec-------CCCHHHHHHHHHHcCCCEEEeC-CcchhHHHHHHHHHHcCc--CCCCHHHHHHHh
Confidence 456889999999999874 4678999999999999999986 444455567788899998 489999999999
Q ss_pred CHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCC
Q psy10619 86 DKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGD 165 (246)
Q Consensus 86 dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~ 165 (246)
||..++++|+++|||+|++. .+.+.+++.+++++++||+|+||..++||+|++++++.+|+.+++..+... ...
T Consensus 109 dK~~~~~~l~~~gip~p~~~--~~~~~~~~~~~~~~~g~P~vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~----~~~ 182 (403)
T 4dim_A 109 DKYKMKEAFKKYNVNTARHF--VVRNENELKNALENLKLPVIVKATDLQGSKGIYIAKKEEEAIDGFNETMNL----TKR 182 (403)
T ss_dssp CHHHHHHHHHHHTCCCCCEE--CCCSHHHHHHHHHTSCSSEEEECSCC-----CEEESSHHHHHHHHHHHHHH----CSS
T ss_pred CHHHHHHHHHHcCCCCCCEE--EeCCHHHHHHHHhcCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhc----CcC
Confidence 99999999999999999975 688999999999999999999999999999999999999999999887653 224
Q ss_pred CceEEEecccCcceEEEEeeecc
Q psy10619 166 DRILVEKFIKNPRHIEIQGTTYK 188 (246)
Q Consensus 166 ~~~lve~~i~~g~e~~v~v~~d~ 188 (246)
..+++|+||+ |.|+++.++..+
T Consensus 183 ~~~lvEe~i~-g~e~sv~~~~~~ 204 (403)
T 4dim_A 183 DYCIVEEFIE-GYEFGAQAFVYK 204 (403)
T ss_dssp SCCEEEECCC-SEEEEEEEEEET
T ss_pred CcEEEEEccC-CcEEEEEEEEEC
Confidence 6799999999 899999988643
No 15
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=99.93 E-value=9.9e-26 Score=197.65 Aligned_cols=179 Identities=16% Similarity=0.198 Sum_probs=148.9
Q ss_pred CcCCCCC--CChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCC--HHHHHHHHHcCCeEeCCC
Q psy10619 2 LFPDPCV--FQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSEN--ASFVSRLKEEGVVFIGPT 77 (246)
Q Consensus 2 v~~d~~~--~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~--~~~~~~~~~~g~~~~g~~ 77 (246)
|+++.|. ..++.+.||+.+.+++......+...+.++++++++++|+|+|.. |+ ..+++.+++.|++ |++
T Consensus 57 v~~~~D~~~~~p~~~~Ad~~~~~~~~~~~~~~~~i~~I~~~a~~~~id~Vip~s----E~~l~~~a~~~e~~Gi~--g~~ 130 (474)
T 3vmm_A 57 VIKDKDYFKSLADFEHPDSIYWAHEDHNKPEEEVVEQIVKVAEMFGADAITTNN----ELFIAPMAKACERLGLR--GAG 130 (474)
T ss_dssp EEECGGGCSSGGGGCCCSCCSSCCSCCCCCHHHHHHHHHHHHHHTTCSEEEESC----GGGHHHHHHHHHHTTCC--CSC
T ss_pred EEeCCCcccCCcchhhcCeEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEECC----cccHHHHHHHHHHcCCC--CCC
Confidence 5665554 567799999999886544433345668999999999999999964 55 5788899999998 899
Q ss_pred HHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHH
Q psy10619 78 AECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQ 157 (246)
Q Consensus 78 ~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~ 157 (246)
++++.+++||..++++|+++|||+|++. .+.+.+++.++++++|||+|+||..++||+|+.+++|.+|+.++++.+..
T Consensus 131 ~~ai~~~~DK~~~k~~l~~~GIpvp~~~--~v~s~ee~~~~~~~lg~PvVVKP~~g~gg~Gv~iv~~~eel~~a~~~~~~ 208 (474)
T 3vmm_A 131 VQAAENARDKNKMRDAFNKAGVKSIKNK--RVTTLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTETAEDEFNRVND 208 (474)
T ss_dssp HHHHHHTTCHHHHHHHHHHTTSCCCCEE--EECSHHHHHHHHHHSCSSEEEEESSCCTTTTCEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHcCCCCCCeE--EECCHHHHHHHHHHcCCCEEEEECCCCcCceEEEECCHHHHHHHHHHHHH
Confidence 9999999999999999999999999975 78999999999999999999999999999999999999999999988766
Q ss_pred HHHh-------hcCCCceEEEecccCcce------------EEEE-eeeccee
Q psy10619 158 EAAA-------SFGDDRILVEKFIKNPRH------------IEIQ-GTTYKFL 190 (246)
Q Consensus 158 ~~~~-------~~~~~~~lve~~i~~g~e------------~~v~-v~~d~~~ 190 (246)
.... .+ ...+|||+||+ |.| +++. ++.++..
T Consensus 209 ~~~~~~~~~a~~~-~~~vlVEe~I~-G~e~~~~q~~~~~~e~sv~~v~~dg~~ 259 (474)
T 3vmm_A 209 YLKSINVPKAVTF-EAPFIAEEFLQ-GEYGDWYQTEGYSDYISIEGIMADGEY 259 (474)
T ss_dssp HHTTSCCCTTCCC-SCSEEEEECCC-BCHHHHCSSSSSCSEEEEEEEEETTEE
T ss_pred HHhhccccccccC-CCeEEEEeCCC-CceeeeeecccccceeEEEEEEECCeE
Confidence 4432 12 36899999999 655 8886 4445543
No 16
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=99.93 E-value=7e-25 Score=188.35 Aligned_cols=174 Identities=19% Similarity=0.266 Sum_probs=145.0
Q ss_pred cCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHH
Q psy10619 3 FPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIR 82 (246)
Q Consensus 3 ~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~ 82 (246)
..|.+++.++..++|+.+.++ |.+.+.++++++++++|+|+++++... ....+.+++.|++ ++++++++.
T Consensus 39 ~~~~~~~~~~~~~~d~~~~~~-------~~d~~~l~~~~~~~~~d~v~~~~e~~~--~~~~~~l~~~gi~-~~~~~~~~~ 108 (391)
T 1kjq_A 39 AVDRYADAPAMHVAHRSHVIN-------MLDGDALRRVVELEKPHYIVPEIEAIA--TDMLIQLEEEGLN-VVPCARATK 108 (391)
T ss_dssp EEESSTTCGGGGGSSEEEECC-------TTCHHHHHHHHHHHCCSEEEECSSCSC--HHHHHHHHHTTCE-ESSCHHHHH
T ss_pred EEECCCCCchhhhccceEECC-------CCCHHHHHHHHHHcCCCEEEECCCcCC--HHHHHHHHhCCCC-cCCCHHHHH
Confidence 345667788999999988764 467899999999999999999886433 3456778899994 689999999
Q ss_pred HhcCHHHHHHHH-HHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHh
Q psy10619 83 GMGDKLESKKLA-KEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAA 161 (246)
Q Consensus 83 ~~~dK~~~~~~l-~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~ 161 (246)
+++||..++++| +++|||+|++. .+.+.+++.+++++++||+|+||..++||+|+.++++.+|+.++++.+......
T Consensus 109 ~~~dK~~~~~~l~~~~gip~p~~~--~~~~~~~~~~~~~~~g~P~vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~ 186 (391)
T 1kjq_A 109 LTMNREGIRRLAAEELQLPTSTYR--FADSESLFREAVADIGYPCIVKPVMSSSGKGQTFIRSAEQLAQAWKYAQQGGRA 186 (391)
T ss_dssp HHHSHHHHHHHHHTTSCCCBCCEE--EESSHHHHHHHHHHHCSSEEEEESCC---CCCEEECSGGGHHHHHHHHHHHSGG
T ss_pred HhhCHHHHHHHHHHhCCCCCCCee--eeCCHHHHHHHHHhcCCCEEEEeCCCCCCCCeEEECCHHHHHHHHHHHHhhccc
Confidence 999999999999 89999999965 688999999999999999999999999999999999999999999887643211
Q ss_pred hcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 162 SFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 162 ~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
....++||+||++|.|+++.++.++.+
T Consensus 187 --~~~~~lvEe~i~~g~E~sv~~~~~~~g 213 (391)
T 1kjq_A 187 --GAGRVIVEGVVKFDFEITLLTVSAVDG 213 (391)
T ss_dssp --GCCCEEEEECCCCSEEEEEEEEEETTE
T ss_pred --CCCCEEEEEecCCCeEEEEEEEEeCCC
Confidence 246799999999889999999987544
No 17
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=99.93 E-value=5.1e-25 Score=191.86 Aligned_cols=152 Identities=20% Similarity=0.276 Sum_probs=134.1
Q ss_pred CCCCHHHHHHHHHHhCCCEEccccccCCCCH---HHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCc
Q psy10619 30 SYINVDKIIDAIRQTRADAVHPGYGFLSENA---SFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFN 106 (246)
Q Consensus 30 ~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~---~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~ 106 (246)
++.+.+.++++++++++|+|+++. |.. .+++.+++.|++++|++.+++.+++||..++++|+++|||+|++.
T Consensus 68 ~~~d~~~l~~~a~~~~id~vv~g~----E~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~- 142 (442)
T 3lp8_A 68 DINSTIEVIQVCKKEKIELVVIGP----ETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKYG- 142 (442)
T ss_dssp CTTCHHHHHHHHHHTTCCEEEECS----HHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCCBCCEE-
T ss_pred CcCCHHHHHHHHHHhCCCEEEECC----cHHHHHHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHCCCCCCCEE-
Confidence 457899999999999999999875 333 367789999999999999999999999999999999999999965
Q ss_pred cccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcC--CCceEEEecccCcceEEEEe
Q psy10619 107 GIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFG--DDRILVEKFIKNPRHIEIQG 184 (246)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lve~~i~~g~e~~v~v 184 (246)
.+++.+++.+++++++||+|+||..+++|+|+++++|.+|+.++++.+... ..++ ...++||+||+ |.|+++.+
T Consensus 143 -~~~~~~ea~~~~~~~g~PvVvKp~~~~gg~GV~iv~~~eel~~a~~~~~~~--~~~g~~~~~vlvEe~i~-G~E~sv~~ 218 (442)
T 3lp8_A 143 -YFVDTNSAYKFIDKHKLPLVVKADGLAQGKGTVICHTHEEAYNAVDAMLVH--HKFGEAGCAIIIEEFLE-GKEISFFT 218 (442)
T ss_dssp -EESSHHHHHHHHHHSCSSEEEEESSCCTTTSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCC-SEEEEEEE
T ss_pred -EECCHHHHHHHHHHcCCcEEEeECCCCCCCeEEEeCCHHHHHHHHHHHHhh--cccCCCCCeEEEEEeec-CcEEEEEE
Confidence 789999999999999999999999999999999999999999999887631 1121 25799999999 89999999
Q ss_pred eeccee
Q psy10619 185 TTYKFL 190 (246)
Q Consensus 185 ~~d~~~ 190 (246)
+.|+..
T Consensus 219 ~~dg~~ 224 (442)
T 3lp8_A 219 LVDGSN 224 (442)
T ss_dssp EEESSC
T ss_pred EECCCe
Confidence 988754
No 18
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=99.92 E-value=1.7e-24 Score=188.05 Aligned_cols=158 Identities=18% Similarity=0.192 Sum_probs=135.4
Q ss_pred CCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcccc
Q psy10619 30 SYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGII 109 (246)
Q Consensus 30 ~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~ 109 (246)
++.+.+.++++++++++|+++++.+... ...+++.|++.|++++|++.+++.++.||..++++|+++|||+|++. .+
T Consensus 52 ~~~d~~~l~~~a~~~~id~vv~g~e~~l-~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIptp~~~--~~ 128 (431)
T 3mjf_A 52 AATDIAGLLAFAQSHDIGLTIVGPEAPL-VIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQ--NF 128 (431)
T ss_dssp CTTCHHHHHHHHHHTTEEEEEECSHHHH-HTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCSBCCEE--EE
T ss_pred CcCCHHHHHHHHHHhCcCEEEECCchHH-HHHHHHHHHhcCCCeeCCCHHHHHHhhCHHHHHHHHHHcCCCCCCeE--ee
Confidence 4578899999999999999998863210 02467889999999999999999999999999999999999999965 78
Q ss_pred CCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 110 RDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 110 ~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
++.+++.+++++++||+||||..+++|+||.+++|.+|+.++++.+............++||+|++ |.|+++.++.|+.
T Consensus 129 ~~~~ea~~~~~~~g~PvVvKp~~~~gg~GV~iv~~~~el~~a~~~~~~~~~~g~~~~~vlvEe~i~-G~E~sv~~~~dg~ 207 (431)
T 3mjf_A 129 TDVEAALAYVRQKGAPIVIKADGLAAGKGVIVAMTQEEAETAVNDMLAGNAFGDAGHRIVVEEFLD-GEEASFIVMVDGE 207 (431)
T ss_dssp SCHHHHHHHHHHHCSSEEEEESSSCTTCSEEEECSHHHHHHHHHHHHTTHHHHCCCCCEEEEECCC-SEEEEEEEEEESS
T ss_pred CCHHHHHHHHHHcCCeEEEEECCCCCCCcEEEeCCHHHHHHHHHHHHhhccccCCCCeEEEEEeeC-CcEEEEEEEEcCC
Confidence 999999999999999999999999999999999999999999988763211111135899999999 8999999998876
Q ss_pred ee
Q psy10619 190 LI 191 (246)
Q Consensus 190 ~v 191 (246)
.+
T Consensus 208 ~~ 209 (431)
T 3mjf_A 208 NV 209 (431)
T ss_dssp CE
T ss_pred EE
Confidence 54
No 19
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=99.92 E-value=1.7e-24 Score=188.37 Aligned_cols=171 Identities=18% Similarity=0.237 Sum_probs=137.1
Q ss_pred cCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHH
Q psy10619 3 FPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIR 82 (246)
Q Consensus 3 ~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~ 82 (246)
..|.+++.++..++|+.+.++ +.+.+.++++++++++|+|+++++... ..+++.+++.|+ .++++++++.
T Consensus 47 ~v~~~~~~~~~~~ad~~~~~~-------~~d~~~l~~~~~~~~~d~V~~~~e~~~--~~~~~~l~~~gi-~~~~~~~~~~ 116 (433)
T 2dwc_A 47 AVDRYANAPAMQVAHRSYVGN-------MMDKDFLWSVVEREKPDAIIPEIEAIN--LDALFEFEKDGY-FVVPNARATW 116 (433)
T ss_dssp EEESSTTCHHHHHSSEEEESC-------TTCHHHHHHHHHHHCCSEEEECSSCSC--HHHHHHHHHTTC-CBSSCHHHHH
T ss_pred EEECCCCChhhhhcceEEECC-------CCCHHHHHHHHHHcCCCEEEECcccCC--HHHHHHHHhcCC-eeCCCHHHHH
Confidence 345667778999999988764 567899999999999999999986533 355677889999 5689999999
Q ss_pred HhcCHHHHHHHH-HHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHh
Q psy10619 83 GMGDKLESKKLA-KEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAA 161 (246)
Q Consensus 83 ~~~dK~~~~~~l-~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~ 161 (246)
+++||..++++| +++|||+|++. .+.+.+++.+++++++||+|+||..++||+|+.+++|.+|+.++++.+......
T Consensus 117 ~~~dK~~~k~~l~~~~gip~p~~~--~~~~~~~~~~~~~~~g~P~vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~ 194 (433)
T 2dwc_A 117 IAMHRERLRETLVKEAKVPTSRYM--YATTLDELYEACEKIGYPCHTKAIMSSSGKGSYFVKGPEDIPKAWEEAKTKARG 194 (433)
T ss_dssp HHHCHHHHHHHHHHTSCCCCCCEE--EESSHHHHHHHHHHHCSSEEEEECCC------EEECSGGGHHHHHHC-------
T ss_pred HhhCHHHHHHHHHHhcCCCCCCee--EeCCHHHHHHHHHhcCCCEEEEECCCcCCCCeEEECCHHHHHHHHHHHHhhccc
Confidence 999999999999 89999999965 688999999999999999999999999999999999999999999876542111
Q ss_pred hcCCCceEEEecccCcceEEEEeeec
Q psy10619 162 SFGDDRILVEKFIKNPRHIEIQGTTY 187 (246)
Q Consensus 162 ~~~~~~~lve~~i~~g~e~~v~v~~d 187 (246)
....++||+||++|.|+++.++.+
T Consensus 195 --~~~~~lvEe~i~~g~E~sv~~~~~ 218 (433)
T 2dwc_A 195 --SAEKIIVEEHIDFDVEVTELAVRH 218 (433)
T ss_dssp ----CCEEEEECCCCSEEEEECCEEE
T ss_pred --CCCCEEEEccCCCCeeEEEEEEec
Confidence 246799999999889999999874
No 20
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=99.92 E-value=3.1e-24 Score=183.05 Aligned_cols=164 Identities=20% Similarity=0.304 Sum_probs=135.9
Q ss_pred CcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHH
Q psy10619 2 LFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECI 81 (246)
Q Consensus 2 v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~ 81 (246)
++.|.+++.++..+||. +.. ++.+.+.+++++ +++|+|+++++.. ...+.+.+++.| ++|++.+++
T Consensus 26 ~~~~~~~~~~~~~~a~~-~~~-------~~~d~~~l~~~~--~~~d~v~~~~e~~--~~~~~~~l~~~g--~~g~~~~~~ 91 (369)
T 3aw8_A 26 RFLDPSPEACAGQVGEL-VVG-------EFLDEGALLRFA--EGLALVTYEFENV--PVEAARRLEGRL--PLYPPAKAL 91 (369)
T ss_dssp EEEESCTTCGGGGTSEE-EEC-------CTTCHHHHHHHH--TTCSEEEECCTTC--CHHHHHHHHHHS--CBSSCHHHH
T ss_pred EEEeCCCCChHHHhhce-Eec-------CCCCHHHHHHHH--hCCCEEEECCCCc--CHHHHHHHHHcC--CcCCCHHHH
Confidence 34566677788889998 543 467889999999 6899999887653 356677888888 689999999
Q ss_pred HHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCC-CCceeEEeCCHHHHHHHHHHHHHHHH
Q psy10619 82 RGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGG-GGKGMRIANNDQEAIEGFKLSSQEAA 160 (246)
Q Consensus 82 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~-g~~gv~~v~~~~el~~~~~~~~~~~~ 160 (246)
.+++||..++++|+++|||+|++. .+++.+++.+++++++||+|+||..++ +|+|+++++|.+|+.++++.+
T Consensus 92 ~~~~dK~~~k~~l~~~gip~p~~~--~~~~~~~~~~~~~~~g~P~vvKp~~~~~~g~Gv~~v~~~~el~~~~~~~----- 164 (369)
T 3aw8_A 92 EVAQDRLREKTFFQGLGVPTPPFH--PVDGPEDLEEGLKRVGLPALLKTRRGGYDGKGQALVRTEEEALEALKAL----- 164 (369)
T ss_dssp HHHTCHHHHHHHHHHHTCCCCCEE--EESSHHHHHHHHTTTCSSEEEEECCC------EEEECSHHHHHHHHTTT-----
T ss_pred HHhcCHHHHHHHHHHCCCCCCCce--eeCCHHHHHHHHHHcCCCEEEEEcCCCCCcceEEEECCHHHHHHHHHhc-----
Confidence 999999999999999999999975 688999999888899999999999999 999999999999999888664
Q ss_pred hhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 161 ASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 161 ~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
+...++||+||++|+|+++.++.++.
T Consensus 165 ---~~~~~lvEe~i~~g~e~sv~~~~d~~ 190 (369)
T 3aw8_A 165 ---GGRGLILEGFVPFDREVSLLAVRGRT 190 (369)
T ss_dssp ---CSSSEEEEECCCCSEEEEEEEEECTT
T ss_pred ---CCCcEEEEEcCCCCEEEEEEEEECCC
Confidence 24689999999988999999999753
No 21
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=99.91 E-value=2.2e-24 Score=187.13 Aligned_cols=152 Identities=22% Similarity=0.337 Sum_probs=132.6
Q ss_pred CCCCHHHHHHHHHHhCCCEEccccccCCCCH---HHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCc
Q psy10619 30 SYINVDKIIDAIRQTRADAVHPGYGFLSENA---SFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFN 106 (246)
Q Consensus 30 ~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~---~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~ 106 (246)
++.+.+.++++++++++|+|+++. |+. .+++.+++.|++++|++++++.+++||..++++|+++|||+|++.
T Consensus 47 ~~~d~~~l~~~~~~~~~d~v~~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~- 121 (424)
T 2yw2_A 47 SPTDVEKLAEFAKNEGVDFTIVGP----EAPLVEGIVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKYGIPTARYE- 121 (424)
T ss_dssp CTTCHHHHHHHHHHHTCSEEEECS----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEE-
T ss_pred CcCCHHHHHHHHHHcCCCEEEECC----chHHHHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHcCCCCCCeE-
Confidence 467889999999999999999875 333 356788899999999999999999999999999999999999975
Q ss_pred cccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcC--CCceEEEecccCcceEEEEe
Q psy10619 107 GIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFG--DDRILVEKFIKNPRHIEIQG 184 (246)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lve~~i~~g~e~~v~v 184 (246)
.+.+.+++.+++++++||+|+||..+++|+|+++++|.+|+.++++.+... ..++ ...++||+||+ |.|+++.+
T Consensus 122 -~~~~~~~~~~~~~~~~~PvvvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-g~E~sv~~ 197 (424)
T 2yw2_A 122 -VFTDFEKAKEYVEKVGAPIVVKADGLAAGKGAVVCETVEKAIETLDRFLNK--KIFGKSSERVVIEEFLE-GEEASYIV 197 (424)
T ss_dssp -EESCHHHHHHHHHHHCSSEEEEESSCCTTCSEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCC-SEEEEEEE
T ss_pred -EECCHHHHHHHHHHcCCcEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCC-CcEEEEEE
Confidence 688999999999999999999999999999999999999999999877531 1121 25799999999 89999999
Q ss_pred eeccee
Q psy10619 185 TTYKFL 190 (246)
Q Consensus 185 ~~d~~~ 190 (246)
+.++..
T Consensus 198 ~~~G~~ 203 (424)
T 2yw2_A 198 MINGDR 203 (424)
T ss_dssp EEETTE
T ss_pred EEcCCE
Confidence 987654
No 22
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=99.91 E-value=9.4e-24 Score=182.86 Aligned_cols=150 Identities=19% Similarity=0.244 Sum_probs=132.3
Q ss_pred CCCCHHHHHHHHHHhCCCEEccccccCCCCH---HHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCc
Q psy10619 30 SYINVDKIIDAIRQTRADAVHPGYGFLSENA---SFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFN 106 (246)
Q Consensus 30 ~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~---~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~ 106 (246)
++.+.+.++++++++++|+|+++. |+. .+++.+++.|++++|++.+++.+++||..++++|+++|||+|++.
T Consensus 46 ~~~d~~~l~~~~~~~~~d~v~~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~- 120 (417)
T 2ip4_A 46 WNGDVEALADWALAEGIDLTLVGP----EAPLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARYR- 120 (417)
T ss_dssp CCSCHHHHHHHHHHHTCCEEEECS----SHHHHTTHHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCCBCCEE-
T ss_pred CccCHHHHHHHHHHcCCCEEEECC----chHHHHHHHHHHHHCCCCEECccHHHHHHHcCHHHHHHHHHHcCCCCCCee-
Confidence 357889999999999999999885 433 356778899999999999999999999999999999999999965
Q ss_pred cccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeee
Q psy10619 107 GIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTT 186 (246)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~ 186 (246)
.+.+.+++.+++++++||+|+||..+++|+|+.++++.+|+.++++.+.. ..+ ...++||+||+ |.|+++.++.
T Consensus 121 -~~~~~~~~~~~~~~~~~P~vvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~---~~~-~~~~lvEe~i~-g~E~sv~~~~ 194 (417)
T 2ip4_A 121 -VFREPLEALAYLEEVGVPVVVKDSGLAAGKGVTVAFDLHQAKQAVANILN---RAE-GGEVVVEEYLE-GEEATVLALT 194 (417)
T ss_dssp -EESSHHHHHHHHHHHCSSEEEECTTSCSSTTCEEESCHHHHHHHHHHHTT---SSS-CCCEEEEECCC-SCEEEEEEEE
T ss_pred -eeCCHHHHHHHHHHcCCCEEEEECCCCCCCCEEEeCCHHHHHHHHHHHHh---hcc-CCeEEEEECcc-CcEEEEEEEE
Confidence 68899999999999999999999999999999999999999999887641 122 26799999999 8999999998
Q ss_pred ccee
Q psy10619 187 YKFL 190 (246)
Q Consensus 187 d~~~ 190 (246)
++..
T Consensus 195 ~G~~ 198 (417)
T 2ip4_A 195 DGET 198 (417)
T ss_dssp SSSC
T ss_pred eCCE
Confidence 7654
No 23
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=99.91 E-value=2.8e-24 Score=180.62 Aligned_cols=168 Identities=13% Similarity=0.127 Sum_probs=118.0
Q ss_pred CcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCC-CCHHHHHHHHHcCCeEeCCCHHH
Q psy10619 2 LFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLS-ENASFVSRLKEEGVVFIGPTAEC 80 (246)
Q Consensus 2 v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~-e~~~~~~~~~~~g~~~~g~~~~~ 80 (246)
++.|.++++++...+|+.+.++...+ .. ..+.++++++++++|+|++..+... ....+.+.|+..|++++++++++
T Consensus 32 ~~~d~~~~~~~~~~~d~~~~~~~~~~-~~--~~~~l~~~~~~~~~d~vi~~~~~~~~~~a~~~~~l~~~g~~~~~~~~~~ 108 (331)
T 2pn1_A 32 STADCSPLASALYMADQHYIVPKIDE-VE--YIDHLLTLCQDEGVTALLTLIDPELGLLAQATERFQAIGVTVIVSPYAA 108 (331)
T ss_dssp EEEESCTTCGGGGGSSSEEECCCTTS-TT--HHHHHHHHHHHHTCCEEEESSHHHHHHHHHTHHHHHTTTCEECCCCHHH
T ss_pred EEEeCCCcchhHHhhhceecCCCCCC-hh--HHHHHHHHHHHcCCCEEEeCCchhHHHHHHHHHHHHhCCcEEecCCHHH
Confidence 45577888899999999988763222 22 3589999999999999998864211 11234567788899999999999
Q ss_pred HHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHH--HHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHH
Q psy10619 81 IRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIA--RDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQE 158 (246)
Q Consensus 81 ~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~--~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~ 158 (246)
+.+++||..++++|+++|||+|+++ .+.+++.+++ +.++||+|+||..++||+|+.++++.+|+.+++..
T Consensus 109 ~~~~~dK~~~~~~l~~~gip~p~~~----~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~---- 180 (331)
T 2pn1_A 109 CELCFDKYTMYEYCLRQGIAHARTY----ATMASFEEALAAGEVQLPVFVKPRNGSASIEVRRVETVEEVEQLFSK---- 180 (331)
T ss_dssp HHHHHBHHHHHHHHHHHTCCCCCEE----SSHHHHHHHHHTTSSCSCEEEEESBC-------------------------
T ss_pred HHHhhCHHHHHHHHHHcCCCCCcEE----ecHHHhhhhhhcccCCCCEEEEeCCCCCCCCeEEeCCHHHHHHHHHh----
Confidence 9999999999999999999999964 2466666665 36899999999999999999999999999887653
Q ss_pred HHhhcCCCceEEEecccCcceEEEEeeec
Q psy10619 159 AAASFGDDRILVEKFIKNPRHIEIQGTTY 187 (246)
Q Consensus 159 ~~~~~~~~~~lve~~i~~g~e~~v~v~~d 187 (246)
...+++|+||+ |.|+++.++.+
T Consensus 181 ------~~~~lvee~i~-G~e~~v~~~~d 202 (331)
T 2pn1_A 181 ------NTDLIVQELLV-GQELGVDAYVD 202 (331)
T ss_dssp --------CEEEEECCC-SEEEEEEEEEC
T ss_pred ------CCCeEEEecCC-CcEEEEEEEEe
Confidence 25799999999 79999999986
No 24
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=99.91 E-value=1.7e-24 Score=187.94 Aligned_cols=178 Identities=13% Similarity=0.152 Sum_probs=133.5
Q ss_pred CcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHH
Q psy10619 2 LFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECI 81 (246)
Q Consensus 2 v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~ 81 (246)
|+++.+..+.+...+|+++.++...+...+ .+.+.++++++++|+|++..+.. ....+.+.+.+|++ |++++++
T Consensus 34 v~~~~~~~~~~~~~~d~~~~~~~~~d~~~~--~~~~~~~~~~~~id~V~~~~e~~--~~~~a~l~e~lglp--g~~~~~~ 107 (425)
T 3vot_A 34 FYNSAEDFPGNLPAVERCVPLPLFEDEEAA--MDVVRQTFVEFPFDGVMTLFEPA--LPFTAKAAEALNLP--GLPFTTM 107 (425)
T ss_dssp EEETTSCCCCSCTTEEEEEEECTTTCHHHH--HHHHHHHHHHSCCSEEECCCGGG--HHHHHHHHHHTTCS--SCCHHHH
T ss_pred EECCCcccccCHhhccEEEecCCCCCHHHH--HHHHHHhhhhcCCCEEEECCchh--HHHHHHHHHHcCCC--CCCHHHH
Confidence 456666667788889999988643222222 35667778889999999875331 12345566778886 7999999
Q ss_pred HHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHH-
Q psy10619 82 RGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAA- 160 (246)
Q Consensus 82 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~- 160 (246)
.+++||..+|++|+++|||+|++. .+++.+++.. ..++||+||||..|+||+||++++|.+|+.++++.+.....
T Consensus 108 ~~~~dK~~~k~~l~~~gip~p~~~--~~~~~~~~~~--~~~g~P~vvKp~~g~gs~Gv~~v~~~~el~~a~~~~~~~~~~ 183 (425)
T 3vot_A 108 ENCRNKNKTRSILQQNGLNTPVFH--EFHTLADLEN--RKLSYPLVVKPVNGFSSQGVVRVDDRKELEEAVRKVEAVNQR 183 (425)
T ss_dssp HHHHCHHHHHHHHHHTTCCCCCEE--EESSGGGGTT--CCCCSSEEEEESCC-----CEEECSHHHHHHHHHHHHHHTTS
T ss_pred HHhhCHHHHHHHHHHCCCCCCcee--ccCcHHHHHH--hhcCCcEEEEECCCCCCCCceEechHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999965 6788877643 47899999999999999999999999999999988764321
Q ss_pred ----hhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 161 ----ASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 161 ----~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
....+..+++|+|++ |.|++|.++.++..
T Consensus 184 ~~~~~~~~~~~~lvEe~i~-G~e~sv~~~~~~g~ 216 (425)
T 3vot_A 184 DLNRFVHGKTGIVAEQFID-GPEFAIETLSIQGN 216 (425)
T ss_dssp SHHHHHTTCCCEEEEECCC-SCEEEEEEEEETTE
T ss_pred hhhhhccCCCcEEEEEEec-CcEEEEEEEEeCCc
Confidence 112356799999999 89999998875543
No 25
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=99.91 E-value=1e-23 Score=182.37 Aligned_cols=164 Identities=18% Similarity=0.255 Sum_probs=140.7
Q ss_pred cCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHH
Q psy10619 3 FPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIR 82 (246)
Q Consensus 3 ~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~ 82 (246)
..|.++++++..+||+.+.. +|.|.+.+.++++ ++|+|++.++ .....+.+.+++. .+++++++++.
T Consensus 63 v~d~~~~~p~~~~ad~~~~~-------~~~d~~~l~~~a~--~~D~V~~~~e--~~~~~~~~~l~~~--~~vgp~~~a~~ 129 (419)
T 4e4t_A 63 VLDPDPASPAGAVADRHLRA-------AYDDEAALAELAG--LCEAVSTEFE--NVPAASLDFLART--TFVAPAGRCVA 129 (419)
T ss_dssp EECSCTTCHHHHHSSEEECC-------CTTCHHHHHHHHH--HCSEEEECCT--TCCHHHHHHHHTT--SEESSCHHHHH
T ss_pred EECCCCcCchhhhCCEEEEC-------CcCCHHHHHHHHh--cCCEEEEccC--cCCHHHHHHHHcc--CCcCCCHHHHH
Confidence 44788999999999998864 4678899999995 5999996653 3445677778777 47899999999
Q ss_pred HhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHH----hCCcEEEEec-cCCCCceeEEeCCHHHHHHHHHHHHH
Q psy10619 83 GMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARD----IGYPVMIKAS-AGGGGKGMRIANNDQEAIEGFKLSSQ 157 (246)
Q Consensus 83 ~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~----~~~P~vvKp~-~g~g~~gv~~v~~~~el~~~~~~~~~ 157 (246)
+++||..+|++|+++|||+|++. .+.+.+++.+++++ + ||+|+||. .|++|+|+++++|.+|+.++++.+
T Consensus 130 ~~~dK~~~k~~l~~~Gip~p~~~--~v~~~~e~~~~~~~~~~~~-~P~VvKp~~~g~~G~Gv~~v~~~~el~~a~~~~-- 204 (419)
T 4e4t_A 130 VAQDRIAEKRFIEASGVPVAPHV--VIESAAALAALDDAALDAV-LPGILKTARLGYDGKGQVRVSTAREARDAHAAL-- 204 (419)
T ss_dssp HHTCHHHHHHHHHHTTCCBCCEE--EECSHHHHHTSCHHHHHTT-CSEEEEESSSCCTTTTEEEECSHHHHHHHHHHT--
T ss_pred HhcCHHHHHHHHHHcCcCCCCeE--EECCHHHHHHHHHhhcccc-CCEEEEecCCCCCCCceEEECCHHHHHHHHHhc--
Confidence 99999999999999999999975 78999999888888 9 99999999 788999999999999999998764
Q ss_pred HHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 158 EAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 158 ~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
++..++||+||++++|+++.++++..+
T Consensus 205 ------~~~~~lvEe~i~~~~Eisv~v~~~~~G 231 (419)
T 4e4t_A 205 ------GGVPCVLEKRLPLKYEVSALIARGADG 231 (419)
T ss_dssp ------TTCCEEEEECCCEEEEEEEEEEECTTS
T ss_pred ------CCCcEEEeecCCCCeEEEEEEEEcCCC
Confidence 257899999999789999999987543
No 26
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=99.91 E-value=7.2e-24 Score=180.39 Aligned_cols=138 Identities=25% Similarity=0.370 Sum_probs=124.2
Q ss_pred HhCCCEEccc-cccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHH----HHHH
Q psy10619 43 QTRADAVHPG-YGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDAD----HCVE 117 (246)
Q Consensus 43 ~~~~d~v~~~-~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~----~~~~ 117 (246)
..++|+|++. +|..+|+..++..|+..|+|++|++..++.+++||..++++|+++|||+|++. .+.+.+ ++.+
T Consensus 96 ~~~~D~vf~~lhG~~gEdg~iq~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~~ 173 (364)
T 3i12_A 96 LPTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFI--TLTRTNRHAFSFAE 173 (364)
T ss_dssp CCCCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEE--EEETTTGGGCCHHH
T ss_pred cCCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEE--EEEccccchhhHHH
Confidence 3579999999 68888999999999999999999999999999999999999999999999975 566655 6777
Q ss_pred HHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 118 IARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 118 ~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
+.+.++||+||||..+++|.|+.++++.+|+..+++.++.. +..+|||+||+ |+|+++.+++++.
T Consensus 174 ~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~------~~~vlVEe~I~-G~E~~v~vl~~~~ 238 (364)
T 3i12_A 174 VESRLGLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEF------DHKVVVEQGIK-GREIECAVLGNDN 238 (364)
T ss_dssp HHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEEEESSS
T ss_pred HHHhcCCCEEEEECCCCCCcCeEEeCCHHHHHHHHHHHHhc------CCcEEEEcCcC-CeEEEEEEEeCCC
Confidence 78899999999999999999999999999999999887542 57899999999 7999999998764
No 27
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=99.91 E-value=2e-23 Score=179.87 Aligned_cols=164 Identities=16% Similarity=0.223 Sum_probs=139.7
Q ss_pred cCCCCCCChhhhccc--eeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHH
Q psy10619 3 FPDPCVFQRHVKLAD--EAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAEC 80 (246)
Q Consensus 3 ~~d~~~~~~~~~~ad--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~ 80 (246)
..| ++++++.++|| ..+.. +|.+.+.+.+++++ +|++++.++. ....+.+.+++ |++ +++++++
T Consensus 52 ~~d-~~~~p~~~~ad~~~~~~~-------~~~d~~~l~~~a~~--~d~i~~e~e~--~~~~~l~~l~~-g~~-v~p~~~a 117 (403)
T 3k5i_A 52 VLD-ADNSPAKQISAHDGHVTG-------SFKEREAVRQLAKT--CDVVTAEIEH--VDTYALEEVAS-EVK-IEPSWQA 117 (403)
T ss_dssp EEE-STTCTTGGGCCSSCCEES-------CTTCHHHHHHHHTT--CSEEEESSSC--SCHHHHHHHTT-TSE-ESSCHHH
T ss_pred EEE-CCCCcHHHhccccceeec-------CCCCHHHHHHHHHh--CCEEEECCCC--CCHHHHHHHHc-CCc-cCcCHHH
Confidence 346 78899999999 44432 57888999999987 7888766533 23567788888 998 7899999
Q ss_pred HHHhcCHHHHHHHHHHhCCCCCCCCccccC--CHHHHHHHHHHhCCcEEEEeccCC-CCceeEEeCCHHHHHHHHHHHHH
Q psy10619 81 IRGMGDKLESKKLAKEAGVNIIPGFNGIIR--DADHCVEIARDIGYPVMIKASAGG-GGKGMRIANNDQEAIEGFKLSSQ 157 (246)
Q Consensus 81 ~~~~~dK~~~~~~l~~~gip~p~~~~~~~~--~~~~~~~~~~~~~~P~vvKp~~g~-g~~gv~~v~~~~el~~~~~~~~~ 157 (246)
+.+++||..++++|+++|||+|++. .+. +.+++.++++++|||+|+||..++ +|+|++++++.+|+.++++.+
T Consensus 118 ~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~~~~~g~P~VvKp~~gg~~g~Gv~~v~~~~el~~a~~~~-- 193 (403)
T 3k5i_A 118 IRTIQNKFNQKEHLRKYGIPMAEHR--ELVENTPAELAKVGEQLGYPLMLKSKTMAYDGRGNFRVNSQDDIPEALEAL-- 193 (403)
T ss_dssp HHHHTSHHHHHHHHHTTTCCBCCEE--EESSCCHHHHHHHHHHHCSSEEEEESSSCCTTTTEEEECSTTSHHHHHHHT--
T ss_pred HHHhcCHHHHHHHHHHCCcCCCCEE--EEcCCCHHHHHHHHHHhCCCEEEEeCCCCcCCCCEEEECCHHHHHHHHHhc--
Confidence 9999999999999999999999975 567 999999999999999999999987 999999999999999988764
Q ss_pred HHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 158 EAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 158 ~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
+...++||+||++++|+++.+++++.+
T Consensus 194 ------~~~~~lvEe~i~~~~E~sv~v~~~~~g 220 (403)
T 3k5i_A 194 ------KDRPLYAEKWAYFKMELAVIVVKTKDE 220 (403)
T ss_dssp ------TTSCEEEEECCCEEEEEEEEEEECSSC
T ss_pred ------CCCcEEEecCCCCCeEEEEEEEEcCCC
Confidence 246899999999789999999988654
No 28
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=99.91 E-value=2.1e-23 Score=182.42 Aligned_cols=155 Identities=19% Similarity=0.311 Sum_probs=129.1
Q ss_pred CCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcccc
Q psy10619 30 SYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGII 109 (246)
Q Consensus 30 ~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~ 109 (246)
++.+.+.++++++++++|+|+++.+... ...+++.+++.|++++|++.+++.+++||..++++|+++|||+|++. .+
T Consensus 68 ~~~d~~~l~~~~~~~~~d~vi~~~E~~~-~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~--~~ 144 (451)
T 2yrx_A 68 DELDIEALVQFAKQQAIDLTIVGPEAPL-ASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHA--AF 144 (451)
T ss_dssp CTTCHHHHHHHHHHTTCSEEEECSHHHH-HTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCEE--EE
T ss_pred CCCCHHHHHHHHHHcCCCEEEECCchHH-HHHHHHHHHHCCCCEeCccHHHHHHhhCHHHHHHHHHHcCCCCCCeE--EE
Confidence 4568899999999999999998753210 01356778899999999999999999999999999999999999965 68
Q ss_pred CCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcC--CCceEEEecccCcceEEEEeeec
Q psy10619 110 RDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFG--DDRILVEKFIKNPRHIEIQGTTY 187 (246)
Q Consensus 110 ~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lve~~i~~g~e~~v~v~~d 187 (246)
.+.+++.+++++++||+|+||..+++|+|+.+++|.+|+.++++.+... ..++ ...++||+||+ |.|+++.++.+
T Consensus 145 ~~~~~~~~~~~~~~~PvVvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-G~E~sv~~~~d 221 (451)
T 2yrx_A 145 TSYEEAKAYIEQKGAPIVIKADGLAAGKGVTVAQTVEEALAAAKAALVD--GQFGTAGSQVVIEEYLE-GEEFSFMAFVN 221 (451)
T ss_dssp SCHHHHHHHHHHHCSSEEEEECC----CCEEEESSHHHHHHHHHHHHHH--SCCBTTBCCEEEEECCC-SEEEEEEEEEE
T ss_pred CCHHHHHHHHHhcCCcEEEEeCCCCCCCcEEEECCHHHHHHHHHHHHhc--cccCCCCCeEEEEECCc-CcEEEEEEEEc
Confidence 9999999999999999999999999999999999999999999887642 1122 26799999999 89999999987
Q ss_pred cee
Q psy10619 188 KFL 190 (246)
Q Consensus 188 ~~~ 190 (246)
+..
T Consensus 222 G~~ 224 (451)
T 2yrx_A 222 GEK 224 (451)
T ss_dssp TTE
T ss_pred CCE
Confidence 654
No 29
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=99.91 E-value=3.2e-24 Score=186.09 Aligned_cols=155 Identities=17% Similarity=0.246 Sum_probs=132.2
Q ss_pred CCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcccc
Q psy10619 30 SYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGII 109 (246)
Q Consensus 30 ~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~ 109 (246)
++.+.+.++++++++++|+|+++.+... ...+++.+++.|++++|++.+++.+++||..++++|+++|||+|++. .+
T Consensus 47 ~~~d~~~l~~~~~~~~~d~v~~~~E~~~-~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~--~~ 123 (422)
T 2xcl_A 47 EESDHAGLVSFAKQNQVGLTIVGPEVPL-IEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEYE--TF 123 (422)
T ss_dssp CTTCHHHHHHHHHHTTEEEEEECSHHHH-HTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEE--EE
T ss_pred CcCCHHHHHHHHHHcCCCEEEECCcHHH-HHHHHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCeE--EE
Confidence 4578899999999999999998753210 01456778899999999999999999999999999999999999965 68
Q ss_pred CCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcC--CCceEEEecccCcceEEEEeeec
Q psy10619 110 RDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFG--DDRILVEKFIKNPRHIEIQGTTY 187 (246)
Q Consensus 110 ~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lve~~i~~g~e~~v~v~~d 187 (246)
++.+++.++++.++||+|+||..+++|+|+.++++.+|+..+++.+... ..++ ...++||+||+ |.|+++.++.+
T Consensus 124 ~~~~~~~~~~~~~~~P~vvKp~~~~~g~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-g~E~sv~~~~d 200 (422)
T 2xcl_A 124 TSFDEAKAYVQEKGAPIVIKADGLAAGKGVTVAMTEEEAIACLHDFLED--EKFGDASASVVIEEYLS-GEEFSLMAFVK 200 (422)
T ss_dssp SCHHHHHHHHHHHCSSEEEEESSCGGGTCEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCC-SEEEEEEEEEE
T ss_pred CCHHHHHHHHHhcCCCEEEEeCCCCCCCcEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCc-CcEEEEEEEEc
Confidence 8999999999999999999999999999999999999999999876531 1111 26799999999 89999999987
Q ss_pred cee
Q psy10619 188 KFL 190 (246)
Q Consensus 188 ~~~ 190 (246)
+..
T Consensus 201 G~~ 203 (422)
T 2xcl_A 201 GEK 203 (422)
T ss_dssp TTE
T ss_pred CCE
Confidence 654
No 30
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=99.91 E-value=1.1e-23 Score=184.20 Aligned_cols=151 Identities=22% Similarity=0.317 Sum_probs=128.3
Q ss_pred CCCCHHHHHHHHHHhCCCEEccccccCCCCH---HHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCc
Q psy10619 30 SYINVDKIIDAIRQTRADAVHPGYGFLSENA---SFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFN 106 (246)
Q Consensus 30 ~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~---~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~ 106 (246)
++.+.+.++++++++++|+|+++. |+. .+++.+++.|++++|++++++.+++||..++++|+++|||+|++.
T Consensus 73 ~~~d~~~l~~~~~~~~~d~V~~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~- 147 (452)
T 2qk4_A 73 SISDHTALAQFCKEKKIEFVVVGP----EAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQWK- 147 (452)
T ss_dssp CSSCHHHHHHHHHHHTCCEEEECS----SHHHHTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCEE-
T ss_pred CCCCHHHHHHHHHHcCCCEEEECC----cHHHHHHHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCeE-
Confidence 467889999999999999999875 443 456778899999999999999999999999999999999999965
Q ss_pred cccCCHHHHHHHHHHhCCc-EEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcC--CCceEEEecccCcceEEEE
Q psy10619 107 GIIRDADHCVEIARDIGYP-VMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFG--DDRILVEKFIKNPRHIEIQ 183 (246)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~P-~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~--~~~~lve~~i~~g~e~~v~ 183 (246)
.+.+.+++.+++++++|| +|+||..++||+|++++++.+|+.++++.+... ..++ ...++||+||+ |.|+++.
T Consensus 148 -~~~~~~~~~~~~~~~g~P~vvvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-G~E~sv~ 223 (452)
T 2qk4_A 148 -AFTKPEEACSFILSADFPALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQE--KAFGAAGETIVIEELLD-GEEVSCL 223 (452)
T ss_dssp -EESSHHHHHHHHHHCSSCEEEEEESBC---CCEEECSSHHHHHHHHHHHTTC---------CCEEEEECCC-SEEEEEE
T ss_pred -EECCHHHHHHHHHhCCCCeEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCC-CCeEEEE
Confidence 688999999999999999 999999999999999999999999998876431 1121 36799999999 8999999
Q ss_pred eeecce
Q psy10619 184 GTTYKF 189 (246)
Q Consensus 184 v~~d~~ 189 (246)
++.++.
T Consensus 224 ~~~dG~ 229 (452)
T 2qk4_A 224 CFTDGK 229 (452)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 998765
No 31
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=99.90 E-value=5.8e-23 Score=176.36 Aligned_cols=164 Identities=16% Similarity=0.293 Sum_probs=140.3
Q ss_pred CcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHH
Q psy10619 2 LFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECI 81 (246)
Q Consensus 2 v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~ 81 (246)
++.|.++++++..+||..+.. +|.+.+.+.+++++ +|+|.+.+ ......+.+.+++.|+ ++++++++
T Consensus 41 i~~d~~~~~~~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvI~~~~--e~~~~~~~~~l~~~g~--~~~~~~~~ 107 (389)
T 3q2o_A 41 AVLDPTKNSPCAQVADIEIVA-------SYDDLKAIQHLAEI--SDVVTYEF--ENIDYRCLQWLEKHAY--LPQGSQLL 107 (389)
T ss_dssp EEEESSTTCTTTTTCSEEEEC-------CTTCHHHHHHHHHT--CSEEEESC--CCCCHHHHHHHHHHSC--CTTCSHHH
T ss_pred EEEeCCCCCchHHhCCceEec-------CcCCHHHHHHHHHh--CCEeeecc--ccccHHHHHHHHhhCc--cCCCHHHH
Confidence 345778888999999998864 46788999999976 78885444 3344567788888886 78999999
Q ss_pred HHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCC-CceeEEeCCHHHHHHHHHHHHHHHH
Q psy10619 82 RGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGG-GKGMRIANNDQEAIEGFKLSSQEAA 160 (246)
Q Consensus 82 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g-~~gv~~v~~~~el~~~~~~~~~~~~ 160 (246)
.+++||..++++|+++|||+|++. .+.+.+++.++++++|||+|+||..+++ |+|++++++.+|+.++++.+.
T Consensus 108 ~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~~~g~P~vvKp~~~~~~g~Gv~~v~~~~el~~~~~~~~---- 181 (389)
T 3q2o_A 108 SKTQNRFTEKNAIEKAGLPVATYR--LVQNQEQLTEAIAELSYPSVLKTTTGGYDGKGQVVLRSEADVDEARKLAN---- 181 (389)
T ss_dssp HHTTSHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHHHHCSSEEEEESSCCSSSCCEEEESSGGGHHHHHHHHH----
T ss_pred HHhcCHHHHHHHHHHCCCCCCCeE--EECCHHHHHHHHHhcCCCEEEEeCCCCCCCCCeEEECCHHHHHHHHHhcC----
Confidence 999999999999999999999975 7899999999999999999999999975 799999999999999987653
Q ss_pred hhcCCCceEEEecccCcceEEEEeeecc
Q psy10619 161 ASFGDDRILVEKFIKNPRHIEIQGTTYK 188 (246)
Q Consensus 161 ~~~~~~~~lve~~i~~g~e~~v~v~~d~ 188 (246)
...+|||+||++++|+++.++++.
T Consensus 182 ----~~~~lvEe~i~g~~E~~v~~~~~~ 205 (389)
T 3q2o_A 182 ----AAECILEKWVPFEKEVSVIVIRSV 205 (389)
T ss_dssp ----HSCEEEEECCCCSEEEEEEEEECT
T ss_pred ----CCCEEEEecccCceEEEEEEEEcC
Confidence 367999999996599999999874
No 32
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=99.90 E-value=6.3e-24 Score=181.81 Aligned_cols=138 Identities=20% Similarity=0.299 Sum_probs=123.7
Q ss_pred HhCCCEEccc-cccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHH----HHHH
Q psy10619 43 QTRADAVHPG-YGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDAD----HCVE 117 (246)
Q Consensus 43 ~~~~d~v~~~-~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~----~~~~ 117 (246)
..++|+|+|. +|..+|+..++.+|+..|+|++|++..++.+++||..++++|+++|||+|++. .+.+.+ ++.+
T Consensus 115 ~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~--~~~~~~~~~~~~~~ 192 (386)
T 3e5n_A 115 LAQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVAPFV--CFDRHTAAHADVDT 192 (386)
T ss_dssp CCCCSEEEEEECSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHBHHHHHHHHHHTTCCBCCEE--EEEHHHHTTCCHHH
T ss_pred cCCCCEEEEcCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCCCCEE--EEeCcccchhhHHH
Confidence 4579999999 67778888999999999999999999999999999999999999999999975 566666 6777
Q ss_pred HHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 118 IARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 118 ~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
+.+.++||+||||..+++|.|+.++++.+|+.++++.++. + +..+|||+||+ |+|++|.+++++.
T Consensus 193 ~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~-----~-~~~vlVEe~I~-G~E~~v~vl~~~~ 257 (386)
T 3e5n_A 193 LIAQLGLPLFVKPANQGSSVGVSQVRTADAFAAALALALA-----Y-DHKVLVEAAVA-GREIECAVLGNAV 257 (386)
T ss_dssp HHHHHCSSEEEEESBSCSSTTCEEECSGGGHHHHHHHHTT-----T-CSEEEEEECCC-SEEEEEEEECSSS
T ss_pred HHHhcCCCEEEEECCCCcCCCEEEECCHHHHHHHHHHHHh-----C-CCcEEEEcCCC-CeEEEEEEEeCCC
Confidence 7889999999999999999999999999999999987642 2 56899999999 8999999998865
No 33
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=99.90 E-value=7.4e-23 Score=194.84 Aligned_cols=173 Identities=24% Similarity=0.295 Sum_probs=144.4
Q ss_pred CCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEcccccc-CCCCH--HHHH--HHHHcCCeEeCCCH
Q psy10619 4 PDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGF-LSENA--SFVS--RLKEEGVVFIGPTA 78 (246)
Q Consensus 4 ~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~-~~e~~--~~~~--~~~~~g~~~~g~~~ 78 (246)
++.+...++..+||+.+..| .+.+.+.++++++++|+|+|++++ ...+. .+.+ .|++.|++++|++.
T Consensus 49 ~~~~~~~~~~~~ad~~~i~p--------~~~e~i~~i~~~~~~D~V~p~~g~~~~l~~~~~l~~~~~le~~gv~~~G~~~ 120 (1073)
T 1a9x_A 49 SNPATIMTDPEMADATYIEP--------IHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA 120 (1073)
T ss_dssp SCTTCGGGCGGGSSEEECSC--------CCHHHHHHHHHHHCCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCH
T ss_pred CCcccccCChhhCcEEEECC--------CCHHHHHHHHHHhCCCEEEeccCCchHHHHHHHHHHhhHHHHcCCeeeCCCH
Confidence 33333447788999988543 478999999999999999998753 11111 1222 67889999999999
Q ss_pred HHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHH
Q psy10619 79 ECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQE 158 (246)
Q Consensus 79 ~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~ 158 (246)
+++..+.||..++++|+++|+|+|++. .+.+.+++.++++++|||+||||..++||+|+.+++|.+|+.+++......
T Consensus 121 ~ai~~~~DK~~~k~~l~~~Gipvp~~~--~v~~~~ea~~~~~~ig~PvVvKp~~~~Gg~Gv~iv~~~eel~~~~~~~~~~ 198 (1073)
T 1a9x_A 121 DAIDKAEDRRRFDVAMKKIGLETARSG--IAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDL 198 (1073)
T ss_dssp HHHHHHHSHHHHHHHHHHTTCCCCSEE--EESSHHHHHHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHhhCHHHHHHHHHHCCcCCCCEE--EECCHHHHHHHHHHcCCCEEEEECCCCCCCceEEeCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999975 789999999999999999999999999999999999999999999876643
Q ss_pred HHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 159 AAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 159 ~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
...+.+|||+||+|.+|+++++++|..+
T Consensus 199 ----~~~~~vlvEe~I~G~~E~~v~v~~d~~g 226 (1073)
T 1a9x_A 199 ----SPTKELLIDESLIGWKEYEMEVVRDKND 226 (1073)
T ss_dssp ----CTTSCEEEEECCTTSEEEEEEEEECTTC
T ss_pred ----CCCCcEEEEEccCCCeEEEEEEEEeCCC
Confidence 2246899999999558999999997643
No 34
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=99.90 E-value=4.5e-23 Score=176.14 Aligned_cols=137 Identities=20% Similarity=0.317 Sum_probs=115.7
Q ss_pred CCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhC-CCCCCCCccccCCH----HHHHHH
Q psy10619 45 RADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAG-VNIIPGFNGIIRDA----DHCVEI 118 (246)
Q Consensus 45 ~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~g-ip~p~~~~~~~~~~----~~~~~~ 118 (246)
++|++++.. |..+|+..++.+|+..|+|++|++..++.+++||..++++|+++| ||+|+++ .+.+. +++.++
T Consensus 119 ~~D~vf~~lhG~~GEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~G~Ipvp~~~--~~~~~~~~~~~~~~~ 196 (383)
T 3k3p_A 119 EEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQVAYV--ALIEGEPLESKLAEV 196 (383)
T ss_dssp TTCEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHHCCCCBCCEE--EEETTSCHHHHHHHH
T ss_pred CCCEEEEcCCCCCcchHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHhCCCcCCCCEE--EEeCccchhHHHHHH
Confidence 699999885 667899999999999999999999999999999999999999999 9999975 44443 466777
Q ss_pred HHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 119 ARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 119 ~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
.+.++||+||||..+++|.|+.++++.+|+.++++.++. + +..+|||+||+ |+|++|.+++++..
T Consensus 197 ~~~lg~PvvVKP~~ggss~GV~~v~~~~el~~al~~a~~-----~-~~~vlVEe~I~-G~E~~v~vl~d~~~ 261 (383)
T 3k3p_A 197 EEKLIYPVFVKPANMGSSVGISKAENRTDLKQAIALALK-----Y-DSRVLIEQGVD-AREIEVGILGNTDV 261 (383)
T ss_dssp HHHCCSSEEEEECC------CEEESSHHHHHHHHHHHHH-----H-CSEEEEEECCC-SEEEEEEEEESSSC
T ss_pred HHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh-----C-CCeEEEEcCCC-CeEEEEEEEeCCCe
Confidence 889999999999999999999999999999999988654 2 56899999999 89999999988643
No 35
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=99.90 E-value=2.6e-23 Score=177.01 Aligned_cols=137 Identities=20% Similarity=0.247 Sum_probs=117.6
Q ss_pred hCCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHH----HHHH
Q psy10619 44 TRADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADH----CVEI 118 (246)
Q Consensus 44 ~~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~----~~~~ 118 (246)
.++|+|+|.. |..+|+..++..|+..|+|++|++..++.+++||..++++|+++|||+|++. .+.+.++ +..+
T Consensus 97 ~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~--~~~~~~~~~~~~~~~ 174 (372)
T 3tqt_A 97 YSADCVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDWH--TLSPRDATEGVYQRL 174 (372)
T ss_dssp ECCSEEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCCBCCCE--EECTTSCCTTHHHHH
T ss_pred cCCCEEEEcCCCCCCcCHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEE--EEechhhhhhHHHHH
Confidence 5799999884 6778999999999999999999999999999999999999999999999975 4555442 4566
Q ss_pred HHHhCCc-EEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 119 ARDIGYP-VMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 119 ~~~~~~P-~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
.+.++|| +||||..+++|.|+.++++.+|+..+++.++. + +..+|||+||+ |+|++|.+++++.
T Consensus 175 ~~~lg~P~vvVKP~~ggss~Gv~~v~~~~eL~~a~~~a~~-----~-~~~vlVEe~I~-G~E~~v~vl~~~~ 239 (372)
T 3tqt_A 175 LDRWGTSELFVKAVSLGSSVATLPVKTETEFTKAVKEVFR-----Y-DDRLMVEPRIR-GREIECAVLGNGA 239 (372)
T ss_dssp HHHC---CEEEEESSCCSGGGEEEECSHHHHHHHHHHHTT-----T-CSCEEEEECCC-SEEEEEEEEESSS
T ss_pred HHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHh-----c-CCCEEEECCCC-CEEEEEEEEeCCC
Confidence 7789999 99999999999999999999999999877542 2 56899999999 8999999999873
No 36
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=99.90 E-value=7.6e-23 Score=174.87 Aligned_cols=164 Identities=23% Similarity=0.338 Sum_probs=136.2
Q ss_pred CcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHH
Q psy10619 2 LFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECI 81 (246)
Q Consensus 2 v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~ 81 (246)
+..|.++++++.++||+++.. +|.|.+.+.+++++ +|+|.+.++. ........+++.+ .++++++++
T Consensus 39 iv~d~~~~~p~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvi~~~~E~--~~~~~l~~l~~~~--~v~p~~~~~ 105 (377)
T 3orq_A 39 VVLDPSEDCPCRYVAHEFIQA-------KYDDEKALNQLGQK--CDVITYEFEN--ISAQQLKLLCEKY--NIPQGYQAI 105 (377)
T ss_dssp EEEESCTTCTTGGGSSEEEEC-------CTTCHHHHHHHHHH--CSEEEESSTT--SCHHHHHHHHHHS--CCTTTTHHH
T ss_pred EEEECCCCChhhhhCCEEEEC-------CCCCHHHHHHHHHh--CCcceecccc--cCHHHHHHHhhhc--CCCCCHHHH
Confidence 345788889999999998875 36788999999987 8888665522 2234455565554 356899999
Q ss_pred HHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCC-CCceeEEeCCHHHHHHHHHHHHHHHH
Q psy10619 82 RGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGG-GGKGMRIANNDQEAIEGFKLSSQEAA 160 (246)
Q Consensus 82 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~-g~~gv~~v~~~~el~~~~~~~~~~~~ 160 (246)
.+++||..++++|+++|||+|++. .+.+.+++.++++++|||+|+||..++ +|+|++++++.+|+.++++.+.
T Consensus 106 ~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~~~g~P~vvKp~~gg~~g~Gv~~v~~~~el~~a~~~~~---- 179 (377)
T 3orq_A 106 QLLQDRLTEKETLKSAGTKVVPFI--SVKESTDIDKAIETLGYPFIVKTRFGGYDGKGQVLINNEKDLQEGFKLIE---- 179 (377)
T ss_dssp HHHHSHHHHHHHHHHTTCCBCCEE--EECSSTHHHHHHHHTCSSEEEEESSSCCTTTTEEEECSTTSHHHHHHHHT----
T ss_pred HHhcCHHHHHHHHHHCCCCCCCeE--EECCHHHHHHHHHHcCCCEEEEeCCCCCCCCCeEEECCHHHHHHHHHhcC----
Confidence 999999999999999999999975 688889999999999999999999997 8999999999999999987753
Q ss_pred hhcCCCceEEEecccCcceEEEEeeecc
Q psy10619 161 ASFGDDRILVEKFIKNPRHIEIQGTTYK 188 (246)
Q Consensus 161 ~~~~~~~~lve~~i~~g~e~~v~v~~d~ 188 (246)
...+++|+||++.+|+++.++++.
T Consensus 180 ----~~~~ivEe~i~g~~E~sv~~~~~~ 203 (377)
T 3orq_A 180 ----TSECVAEKYLNIKKEVSLTVTRGN 203 (377)
T ss_dssp ----TSCEEEEECCCEEEEEEEEEEECG
T ss_pred ----CCcEEEEccCCCCEEEEEEEEEeC
Confidence 377999999994489999999553
No 37
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=99.89 E-value=1.7e-23 Score=177.61 Aligned_cols=144 Identities=22% Similarity=0.262 Sum_probs=122.8
Q ss_pred HHHHHHhCCCEEccc-cccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCC---HH
Q psy10619 38 IDAIRQTRADAVHPG-YGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRD---AD 113 (246)
Q Consensus 38 ~~~~~~~~~d~v~~~-~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~---~~ 113 (246)
....+..++|++++. +|+.+|+..++..|+..|+|++|+++.++.+|+||..+|++|+++|||+|++. .+.+ ..
T Consensus 90 ~~~~~~~~~D~vf~~l~G~~gEdg~~q~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~--~~~~~~~~~ 167 (357)
T 4fu0_A 90 SDKYRIIKVDLVFPVLHGKNGEDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKSV--TFKRFNEEA 167 (357)
T ss_dssp ---CEEEECSEEEECCCSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCBCCCEE--EEEGGGHHH
T ss_pred hhhHhhcCCCEEEECCcCccccCHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHCCCCCCCEE--eecCCChHH
Confidence 344556789999988 57788999999999999999999999999999999999999999999999975 3333 23
Q ss_pred HHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 114 HCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 114 ~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
.+.++.+++|||+||||+.+++|+|+.+++|.+++..++..+.. .+..+++|+||+ |+|+++.+++++..
T Consensus 168 ~~~~~~~~lg~PvvVKP~~gg~s~Gv~~v~~~~el~~~~~~a~~------~~~~vlvE~~i~-G~e~~v~vl~~~~~ 237 (357)
T 4fu0_A 168 AMKEIEANLTYPLFIKPVRAGSSFGITKVIEKQELDAAIELAFE------HDTEVIVEETIN-GFEVGCAVLGIDEL 237 (357)
T ss_dssp HHHHHHHHCCSSEEEEETTCSSSTTCEEESSHHHHHHHHHHHTT------TCSEEEEEECCC-SEEEEEEEEESSSE
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCceEEeccHHhHHHHHHHHhc------cCCeEEEEEecC-CEEEEEEEEecCCc
Confidence 34566778999999999999999999999999999999877543 257899999999 99999999988755
No 38
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=99.89 E-value=2.5e-23 Score=179.92 Aligned_cols=149 Identities=19% Similarity=0.182 Sum_probs=123.2
Q ss_pred CHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCH
Q psy10619 33 NVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDA 112 (246)
Q Consensus 33 ~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~ 112 (246)
+.+.++++++++++|+|+++. |+..++..++..+. ++|++++++.+++||..++++|+++|||+|++. .+++.
T Consensus 58 d~~~l~~~~~~~~~d~V~~~~----E~~~~a~~~~~l~~-~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~--~~~~~ 130 (412)
T 1vkz_A 58 PYEGEKTLKAIPEEDIVIPGS----EEFLVEGVSNWRSN-VFGPVKEVARLEGSKVYAKRFMKKYGIRTARFE--VAETP 130 (412)
T ss_dssp CCCTHHHHHTSCSSCEECCSS----GGGTCC-----CTT-BSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEE--EESSH
T ss_pred CHHHHHHHHHHcCCCEEEECC----cHHHHHHHHHHhhh-hhCCCHHHHHHhcCHHHHHHHHHHcCCCCCCEE--EECCH
Confidence 357899999999999999975 44433456677776 789999999999999999999999999999964 68999
Q ss_pred HHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCC-CceEEEecccCcceEEEEeeeccee
Q psy10619 113 DHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGD-DRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 113 ~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~-~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
+++.+++++++||+||||..++||+|+.+++|.+|+.++++.+.... ..++. ..++||+||+ |+|+++.++.|+..
T Consensus 131 ~e~~~~~~~~g~PvvvKp~~~~gg~Gv~~v~~~~el~~a~~~~~~~~-~~~g~~~~vlvEe~i~-G~E~sv~~~~dg~~ 207 (412)
T 1vkz_A 131 EELREKIKKFSPPYVIKADGLARGKGVLILDSKEETIEKGSKLIIGE-LIKGVKGPVVIDEFLA-GNELSAMAVVNGRN 207 (412)
T ss_dssp HHHHHHHTTSCSSEEEEESSCCSSCCEEEESSHHHHHHHHHHHHHTS-SSTTCCSCEEEEECCC-SEEEEEEEEEETTE
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhhc-cccCCCCeEEEEECCc-CcEEEEEEEECCCE
Confidence 99999988999999999999999999999999999999998875421 01322 3799999999 89999999987753
No 39
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=99.89 E-value=3.2e-23 Score=173.32 Aligned_cols=141 Identities=17% Similarity=0.154 Sum_probs=116.0
Q ss_pred HHhCCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHH-
Q psy10619 42 RQTRADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIA- 119 (246)
Q Consensus 42 ~~~~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~- 119 (246)
++.++|++++.. +..+++..++..++..|++++|+++.++.+++||..++++|+++|||+|+++ .+.+.+++.+++
T Consensus 62 ~~~~~D~v~~~~hg~~ge~~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~ 139 (317)
T 4eg0_A 62 KDEGFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPPFE--TVMRGDDYAARAT 139 (317)
T ss_dssp HHTTCCEEEECCCSGGGTSSHHHHHHHHHTCEESSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEE--EEETTSCHHHHHH
T ss_pred hhcCCCEEEEcCCCCCCchHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEE--EEECchhHHHHHH
Confidence 345677777664 4556778899999999999999999999999999999999999999999975 566666666666
Q ss_pred ---HHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 120 ---RDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 120 ---~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
+.++||+||||..+++|.|+.++++.+++.++++.+.. + ...+|||+||+.|+|+++.+++++..
T Consensus 140 ~~~~~~g~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~-----~-~~~~lvEe~i~~G~E~~v~vl~~~~~ 207 (317)
T 4eg0_A 140 DIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAAT-----H-DKIVIVEKSIEGGGEYTACIAGDLDL 207 (317)
T ss_dssp HHHHHHCSCEEEEECC-----CCEEECSGGGHHHHHHHHTT-----T-CSEEEEEECCCSSEEEEEEEETTCCC
T ss_pred HHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh-----C-CCeEEEEcCCCCCcEEEEEEECCccc
Confidence 78999999999999999999999999999999887542 2 57899999999789999999988543
No 40
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=99.89 E-value=6.6e-23 Score=175.24 Aligned_cols=136 Identities=21% Similarity=0.271 Sum_probs=119.6
Q ss_pred hCCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHH----HHHH
Q psy10619 44 TRADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADH----CVEI 118 (246)
Q Consensus 44 ~~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~----~~~~ 118 (246)
.++|+|+|.. |..+++..++..++..|+|++|++..++.+++||..++++|+++|||+|++. .+.+.++ +.++
T Consensus 92 ~~~D~v~~~~~g~~gedg~~~~lle~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~~~ 169 (377)
T 1ehi_A 92 GDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKYI--VVDPESANNWSWDKI 169 (377)
T ss_dssp CCCSEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHTTTCCCCCEE--EECTTGGGGCCHHHH
T ss_pred cCCCEEEEecCCCCCcCHHHHHHHHHcCCCEeCcCHHHHHHHcCHHHHHHHHHHcCCCCCCEE--EEeccccchHHHHHH
Confidence 5799999986 5667888888999999999999999999999999999999999999999975 4565543 5566
Q ss_pred HHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCc-ceEEEEeeecc
Q psy10619 119 ARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNP-RHIEIQGTTYK 188 (246)
Q Consensus 119 ~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g-~e~~v~v~~d~ 188 (246)
.+.++||+||||..+++|.|+.+++|.+++..+++.+.. + +..+|||+||+ | +|+++.+++++
T Consensus 170 ~~~~g~PvvVKP~~~~~s~Gv~~v~~~~el~~a~~~~~~-----~-~~~vlvEe~I~-G~~E~~v~vl~~~ 233 (377)
T 1ehi_A 170 VAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQ-----Y-DYKVLIEEAVN-GARELEVGVIGND 233 (377)
T ss_dssp HHHHCSCEEEEESSCCTTTTEEEECSHHHHHHHHHHHTT-----T-CSCEEEEECCC-CSCEEEEEEEESS
T ss_pred HHhcCCCEEEEeCCCCCCcCEEEeCCHHHHHHHHHHHHh-----c-CCcEEEEcCCC-CCceEEEEEEcCC
Confidence 778999999999999999999999999999999887542 2 46899999999 7 99999999875
No 41
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=99.89 E-value=7.4e-23 Score=175.15 Aligned_cols=158 Identities=22% Similarity=0.412 Sum_probs=128.4
Q ss_pred cCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHH
Q psy10619 3 FPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIR 82 (246)
Q Consensus 3 ~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~ 82 (246)
+.|.+++.++..++|..+..+ +.+.+.+.+++ +++|+|+++++... ..+.+.+++.|++ ++++++++.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~~--~~~d~v~~~~e~~~--~~~~~~l~~~gi~-~~~~~~~~~ 96 (380)
T 3ax6_A 29 VLDPTPRSPAGQVADEQIVAG-------FFDSERIEDLV--KGSDVTTYDLEHID--VQTLKKLYNEGYK-IHPSPYTLE 96 (380)
T ss_dssp EEESSTTCTTGGGSSEEEECC-------TTCHHHHHHHH--HTCSEEEESCSCSC--HHHHHHHHHTTCE-ESSCHHHHH
T ss_pred EEeCCCCCchhhhCceEEECC-------CCCHHHHHHHH--hcCCEEEecccCCC--HHHHHHHHHCCCe-ECCCHHHHH
Confidence 456666777888999887653 46788999988 57999998875422 4567788999999 569999999
Q ss_pred HhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCC-CCceeEEeCCHHHHHHHHHHHHHHHHh
Q psy10619 83 GMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGG-GGKGMRIANNDQEAIEGFKLSSQEAAA 161 (246)
Q Consensus 83 ~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~-g~~gv~~v~~~~el~~~~~~~~~~~~~ 161 (246)
+++||..++++|+++|||+|++. .+++.++ ++++++||+|+||..++ +|+|+.++++.+|+..+++
T Consensus 97 ~~~dK~~~~~~l~~~gip~p~~~--~~~~~~~---~~~~~~~P~vvKp~~~~y~g~Gv~~v~~~~el~~~~~-------- 163 (380)
T 3ax6_A 97 IIQDKFVQKEFLKKNGIPVPEYK--LVKDLES---DVREFGFPVVQKARKGGYDGRGVFIIKNEKDLENAIK-------- 163 (380)
T ss_dssp HHHSHHHHHHHHHHTTCCCCCEE--ECSSHHH---HHHTTCSSEEEEESCCC-----EEEECSGGGGGGCCC--------
T ss_pred HhcCHHHHHHHHHHcCCCCCCeE--EeCCHHH---HHHhcCCCEEEEecCCCCCCCCeEEECCHHHHHHHhc--------
Confidence 99999999999999999999965 6778776 56789999999999999 9999999999999866542
Q ss_pred hcCCCceEEEecccCcceEEEEeeecce
Q psy10619 162 SFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 162 ~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
..++||+||++|+|+++.++.++.
T Consensus 164 ----~~~lvEe~i~~g~e~sv~~~~~~~ 187 (380)
T 3ax6_A 164 ----GETYLEEFVEIEKELAVMVARNEK 187 (380)
T ss_dssp ----SSEEEEECCCEEEEEEEEEEECSS
T ss_pred ----CCEEEEeccCCCeeEEEEEEECCC
Confidence 579999999978999999998743
No 42
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=99.89 E-value=2.4e-23 Score=177.51 Aligned_cols=137 Identities=21% Similarity=0.257 Sum_probs=120.1
Q ss_pred CCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHH--HHHHHHH
Q psy10619 45 RADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADH--CVEIARD 121 (246)
Q Consensus 45 ~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~--~~~~~~~ 121 (246)
++|+|+|.. |..+|+..++.+|+..|+|++|++..++.+++||..++++|+++|||+|+++ .+.+.++ .......
T Consensus 109 ~~D~vfp~lhG~~gEdg~iq~lle~~gip~vG~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~--~~~~~~~~~~~~~~~~ 186 (373)
T 3lwb_A 109 SVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYA--VLRPPRSTLHRQECER 186 (373)
T ss_dssp TCSEEEECCEETTEECCHHHHHHHHHTCCBSSSCHHHHHHHHBHHHHHHHHHHTTCCBCCEE--EECTTCCCCCHHHHHH
T ss_pred CccEEEECCCCCCCccHHHHHHHHHcCCCccCCcHHHHHHHcCHHHHHHHHHHcCcCCCCEE--EEECcccchhHHHHHh
Confidence 699999985 7788999999999999999999999999999999999999999999999975 4555443 1334678
Q ss_pred hCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 122 IGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 122 ~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
++||+||||..+++|.|+.++++.+|+..+++.+.. + +..+|||+||+ |+|++|.+++++..
T Consensus 187 lg~PvvVKP~~ggss~GV~~v~~~~eL~~a~~~a~~-----~-~~~vlVEe~I~-G~E~~v~vl~~~~~ 248 (373)
T 3lwb_A 187 LGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARR-----H-DPKVIVEAAIS-GRELECGVLEMPDG 248 (373)
T ss_dssp HCSCEEEEESBCSTTTTCEEECSGGGHHHHHHHHHT-----T-CSSEEEEECCE-EEEEEEEEEECTTS
T ss_pred cCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh-----c-CCCEEEeCCCC-CeEEEEEEEECCCC
Confidence 999999999999999999999999999999987653 2 57899999999 89999999987643
No 43
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=99.89 E-value=3e-23 Score=197.48 Aligned_cols=171 Identities=17% Similarity=0.300 Sum_probs=131.8
Q ss_pred CCCCCCh--hhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHH
Q psy10619 5 DPCVFQR--HVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIR 82 (246)
Q Consensus 5 d~~~~~~--~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~ 82 (246)
+.+++.. +...||..+..+ .+.+.+.++++.+++|+|++.++... ...+++.|++.|++++|++++++.
T Consensus 600 ~~np~~~s~~~~~ad~~~~~p--------~~~e~v~~i~~~e~~d~Vi~~~g~~~-~~~la~~Le~~Gi~i~G~~~~ai~ 670 (1073)
T 1a9x_A 600 NCNPETVSTDYDTSDRLYFEP--------VTLEDVLEIVRIEKPKGVIVQYGGQT-PLKLARALEAAGVPVIGTSPDAID 670 (1073)
T ss_dssp CCCTTSSTTSTTSSSEEECCC--------CSHHHHHHHHHHHCCSEEECSSSTHH-HHTTHHHHHHTTCCBCSSCHHHHH
T ss_pred ecCCcccccccccccEEEecc--------chhhhhhhhhhhcCcceEEeecCCch-HHHHHHHHHHCCCCeeCCCHHHHH
Confidence 4444433 455678777532 56799999999999999998875311 124577889999999999999999
Q ss_pred HhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhh
Q psy10619 83 GMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAAS 162 (246)
Q Consensus 83 ~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~ 162 (246)
++.||..++++|+++|||+|++. .+.+.+++.++++++|||+||||..++||+|+.+++|.+++.+++..+...
T Consensus 671 ~~~DK~~~~~ll~~~GIp~P~~~--~~~s~eea~~~~~~ig~PvvVKP~~~~gG~Gv~iv~~~~el~~~~~~a~~~---- 744 (1073)
T 1a9x_A 671 RAEDRERFQHAVERLKLKQPANA--TVTAIEMAVEKAKEIGYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSV---- 744 (1073)
T ss_dssp HHHSHHHHHHHHHHHTCCCCCEE--ECCSHHHHHHHHHHHCSSEEEEC-------CEEEECSHHHHHHHHHHCC------
T ss_pred HhhCHHHHHHHHHHcCcCCCCce--EECCHHHHHHHHHHcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHhh----
Confidence 99999999999999999999975 789999999999999999999999999999999999999999999876432
Q ss_pred cCCCceEEEecccCcceEEEEeeeccee
Q psy10619 163 FGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 163 ~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
.+...++||+||++.+|++|+++.|+..
T Consensus 745 ~~~~~vlvEefI~g~~E~~V~~l~d~~~ 772 (1073)
T 1a9x_A 745 SNDAPVLLDHFLDDAVEVDVDAICDGEM 772 (1073)
T ss_dssp ------EEEBCCTTCEEEEEEEEECSSC
T ss_pred CCCCcEEEEEccCCCcEEEEEEEEECCe
Confidence 1246799999999444999999998765
No 44
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=99.88 E-value=2e-22 Score=171.52 Aligned_cols=138 Identities=25% Similarity=0.343 Sum_probs=120.6
Q ss_pred HHhCCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHH-------
Q psy10619 42 RQTRADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDAD------- 113 (246)
Q Consensus 42 ~~~~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~------- 113 (246)
+..++|+|++.. |..+++..++..++..|+|++|++..++.+++||..++++|+++|||+|++. .+.+.+
T Consensus 84 ~~~~~D~v~~~~~g~~~ed~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~~ 161 (364)
T 2i87_A 84 SGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYI--SFLRSEYEKYEHN 161 (364)
T ss_dssp TSSBCSEEEEECCCSSSCTTHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHHTCCCCCEE--EEEHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCEE--EEechhhcccchh
Confidence 356799999986 5667888888999999999999999999999999999999999999999975 455554
Q ss_pred HHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecc
Q psy10619 114 HCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYK 188 (246)
Q Consensus 114 ~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~ 188 (246)
++.++.+.++||+||||..+++|.|+.++++.+++..+++.+.. + +..+|||+||+ |+|+++.+++++
T Consensus 162 ~~~~~~~~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~-----~-~~~~lvEe~I~-G~E~~v~vl~~~ 229 (364)
T 2i87_A 162 ILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQ-----F-DRKLVIEQGVN-AREIEVAVLGND 229 (364)
T ss_dssp HHHHHHHHCCSSEEEEESSCSSCTTCEEESSHHHHHHHHHHHHT-----T-CSEEEEEECCC-CEEEEEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh-----c-CCeEEEEeCcc-CeEEEEEEEcCC
Confidence 45666778999999999999999999999999999999887642 2 57899999999 899999999875
No 45
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=99.88 E-value=1.4e-22 Score=172.45 Aligned_cols=152 Identities=20% Similarity=0.156 Sum_probs=119.9
Q ss_pred CcCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHH
Q psy10619 2 LFPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECI 81 (246)
Q Consensus 2 v~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~ 81 (246)
|..|.|+++++..+||+++.++. +.+.+.++.++ +++|+|++++++........+.+++.|++ +|++++++
T Consensus 28 v~vd~~~~~~~~~~aD~~~~~~~------~~d~~~~~~~~--~~~D~v~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~a~ 98 (363)
T 4ffl_A 28 VLVDKNPQALIRNYADEFYCFDV------IKEPEKLLELS--KRVDAVLPVNENLACIEFLNSIKEKFSCP-VLFDFEAY 98 (363)
T ss_dssp EEEESCTTCTTTTTSSEEEECCT------TTCHHHHHHHH--TSSSEEEECCCCHHHHHHHHHHGGGCSSC-BCCCHHHH
T ss_pred EEEeCCCCChhHhhCCEEEECCC------CcCHHHHHHHh--cCCCEEEECCCChhHHHHHHHHHHHCCCc-cCCCHHHH
Confidence 45688999999999999999864 34556666554 46999999986544434445556667775 57999999
Q ss_pred HHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHh
Q psy10619 82 RGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAA 161 (246)
Q Consensus 82 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~ 161 (246)
.+++||..+|++|+++|+|+|++. .++||+|+||..++||+|+++++|.+++...
T Consensus 99 ~~~~dK~~~k~~l~~~gip~~~~~---------------~ig~P~vvKp~~g~g~~gv~~v~~~~~~~~~---------- 153 (363)
T 4ffl_A 99 RISRDKKKSKDYFKSIGVPTPQDR---------------PSKPPYFVKPPCESSSVGARIIYDDKDLEGL---------- 153 (363)
T ss_dssp HHHTSHHHHHHHHHHTTCCCCCBS---------------CSSSCEEEECSSCCTTTTCEEEC------CC----------
T ss_pred HHhhCHHHHHHHHHhcCCCCCCce---------------ecCCCEEEEECCCCCCcCeEEeccHHHhhhh----------
Confidence 999999999999999999999864 2589999999999999999999998876322
Q ss_pred hcCCCceEEEecccCcceEEEEeeecceee
Q psy10619 162 SFGDDRILVEKFIKNPRHIEIQGTTYKFLI 191 (246)
Q Consensus 162 ~~~~~~~lve~~i~~g~e~~v~v~~d~~~v 191 (246)
...+++|+|+. |+|+++.+++|+...
T Consensus 154 ---~~~~~~ee~i~-g~e~sv~~~~d~~~~ 179 (363)
T 4ffl_A 154 ---EPDTLVEEYVE-GEVVSLEVVGDGSHF 179 (363)
T ss_dssp ---CTTCEEEECCC-SEEEEEEEEEESSCE
T ss_pred ---ccchhhhhhcc-CcEEEEEEEEECCeE
Confidence 46799999999 899999999987663
No 46
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=99.87 E-value=1.2e-22 Score=171.86 Aligned_cols=137 Identities=18% Similarity=0.265 Sum_probs=119.1
Q ss_pred HhCCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHH
Q psy10619 43 QTRADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARD 121 (246)
Q Consensus 43 ~~~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~ 121 (246)
+.++|+|+|.. |..+|+..++..|+..|+|++|++..++.+++||..++++|+++|||+|++. .+.+.+ ..+...
T Consensus 88 ~~~~D~v~~~lhG~~gedg~iq~~le~~gip~~g~~~~a~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~--~~~~~~ 163 (346)
T 3se7_A 88 TIRLDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFW--TVTADE--KIPTDQ 163 (346)
T ss_dssp EEECSEEEECCCSTTTTSSHHHHHHHHHCCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEE--EEETTS--CCCTTT
T ss_pred ccCCCEEEEccCCCCCCChHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHcCcCcCCEE--EEcCcH--HHHHHh
Confidence 56799999885 6778888999999999999999999999999999999999999999999975 454443 233557
Q ss_pred hCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 122 IGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 122 ~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
++||+||||..+++|.|+.++++.+|+..+++.+.. + +..+|||+||+ |+|++|.+++++.+
T Consensus 164 lg~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~-----~-~~~vlvEe~I~-G~E~~v~vl~~~~~ 225 (346)
T 3se7_A 164 LTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAARE-----Y-DSKVLIEEAVI-GTEIGCAVMGNGPE 225 (346)
T ss_dssp CCSSEEEEESSCCTTTTCEEECSHHHHHHHHHHHTT-----T-CSEEEEEECCC-SEEEEEEEEEETTE
T ss_pred cCCCEEEEeCCCCCCcCEEEECCHHHHHHHHHHHHh-----C-CCcEEEEeCcC-CEEEEEEEEecCCC
Confidence 899999999999999999999999999999887642 2 57899999999 89999999988643
No 47
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=99.87 E-value=3.4e-22 Score=166.21 Aligned_cols=136 Identities=20% Similarity=0.255 Sum_probs=112.8
Q ss_pred hCCCEEccccc-cCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHH-HHHH
Q psy10619 44 TRADAVHPGYG-FLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVE-IARD 121 (246)
Q Consensus 44 ~~~d~v~~~~~-~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~-~~~~ 121 (246)
.++|++++... ..+++..+...++..|++++|+++.++.+++||..++++|+++|||+|++. .+.+.+++.. +++.
T Consensus 54 ~~~D~v~~~~~~~~ge~~~~~~~le~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~--~~~~~~~~~~~~~~~ 131 (307)
T 3r5x_A 54 KDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWI--ELTKMEDLNFDELDK 131 (307)
T ss_dssp TTCSEEEECCCSHHHHSSHHHHHHHHHTCCBSSSCHHHHHHHHCHHHHHHHHHHTTCCCCCEE--EEESSSCCCHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEE--EEeChhhhhHHHHHh
Confidence 58999998853 334666778899999999999999999999999999999999999999975 5666555543 6778
Q ss_pred hCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecc
Q psy10619 122 IGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYK 188 (246)
Q Consensus 122 ~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~ 188 (246)
++||+|+||..++||.|+.++++.+++.++++.+... ...++||+||+ |+|+++.++++.
T Consensus 132 ~~~P~vvKP~~~~~s~Gv~~v~~~~el~~~~~~~~~~------~~~~lvee~i~-G~e~~v~v~~g~ 191 (307)
T 3r5x_A 132 LGFPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEW------DSEVVIEKYIK-GEEITCSIFDGK 191 (307)
T ss_dssp HCSSEEEEECC----CCCEEECSHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEEETTE
T ss_pred cCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEECCcC-CEEEEEEEECCE
Confidence 9999999999999999999999999999999887542 47899999999 899999997553
No 48
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=99.86 E-value=3.6e-22 Score=167.25 Aligned_cols=134 Identities=23% Similarity=0.343 Sum_probs=116.1
Q ss_pred HhCCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHH
Q psy10619 43 QTRADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARD 121 (246)
Q Consensus 43 ~~~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~ 121 (246)
..++|+|++.. |..+|+..++..++..|+|++|++..++.+++||..++++|+++|||+|++. .+.+.++. .. .
T Consensus 74 ~~~~D~v~~~~hg~~gedg~i~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~--~~-~ 148 (322)
T 2fb9_A 74 WERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWV--AVRKGEPP--VV-P 148 (322)
T ss_dssp CTTCSEEEEECCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEE--EEETTSCC--CC-C
T ss_pred ccCCCEEEEeCCCCCCccHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEE--EEECchhh--hh-c
Confidence 56799999986 6677888899999999999999999999999999999999999999999975 44444331 22 6
Q ss_pred hCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCc-ceEEEEeeecc
Q psy10619 122 IGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNP-RHIEIQGTTYK 188 (246)
Q Consensus 122 ~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g-~e~~v~v~~d~ 188 (246)
++||+||||..+++|.|+.++++.+|+..+++.+.. + +..+|||+||+ | +|+++.+++++
T Consensus 149 ~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~-----~-~~~vlvEe~I~-G~~E~~v~vl~~~ 209 (322)
T 2fb9_A 149 FDPPFFVKPANTGSSVGISRVERFQDLEAALALAFR-----Y-DEKAVVEKALS-PVRELEVGVLGNV 209 (322)
T ss_dssp SCSCEEEEETTCCTTTTCEEESSHHHHHHHHHHHTT-----T-CSEEEEEECCS-SCEEEEEEEESSS
T ss_pred cCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh-----c-CCeEEEEeCCC-CCeeEEEEEEeCC
Confidence 899999999999999999999999999999887542 2 47899999999 7 99999999875
No 49
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=99.86 E-value=4.3e-22 Score=169.49 Aligned_cols=157 Identities=17% Similarity=0.280 Sum_probs=91.0
Q ss_pred cCCCCCCChhhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHH
Q psy10619 3 FPDPCVFQRHVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIR 82 (246)
Q Consensus 3 ~~d~~~~~~~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~ 82 (246)
..|.+++.+..+++|..+..+ .+.+++ +++|+|+++++... ..+.+.++. ++|++.+++.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~------------~l~~~~--~~~d~v~~~~e~~~--~~~~~~l~~----~~g~~~~~~~ 88 (365)
T 2z04_A 29 VLEDKENAPACRVADRCFRTG------------QISEFV--DSCDIITYEFEHIK--DEVLEKCES----KLIPNPQALY 88 (365)
T ss_dssp EECSSSSCHHHHHSSEEECGG------------GHHHHH--HHCSEEEESSSCCC--HHHHHHHTT----TBSSCTHHHH
T ss_pred EEeCCCCCchhhhccceeeHH------------HHHHHh--hcCCEEEECCCCCc--HHHHHHHhh----hcCCCHHHHH
Confidence 446666777888888877532 567777 56999998863321 234455543 6889999999
Q ss_pred HhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCC-CCceeEEeCCHHHHHHHHHHHHHHHHh
Q psy10619 83 GMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGG-GGKGMRIANNDQEAIEGFKLSSQEAAA 161 (246)
Q Consensus 83 ~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~-g~~gv~~v~~~~el~~~~~~~~~~~~~ 161 (246)
+++||..++++|+++|||+|++. .++ .+++.+++++++||+|+||..++ +|+|+.++++.+|+.++++.+..
T Consensus 89 ~~~dK~~~~~~l~~~gip~p~~~--~~~-~~~~~~~~~~~~~P~vvKp~~~~~~g~Gv~~v~~~~el~~~~~~~~~---- 161 (365)
T 2z04_A 89 VKKSRIREKLFLKKHGFPVPEFL--VIK-RDEIIDALKSFKLPVVIKAEKLGYDGKGQYRIKKLEDANQVVKNHDK---- 161 (365)
T ss_dssp HHTCHHHHHHHHHTTTCCCCCEE--EC---------------CEEEECC-------------------------------
T ss_pred HhhCHHHHHHHHHHcCCCCCCEE--EEc-HHHHHHHHHhcCCCEEEEEcCCCcCCCCeEEECCHHHHHHHHHHhcc----
Confidence 99999999999999999999975 566 77888888889999999999999 99999999999999998877642
Q ss_pred hcCCCceEEEecccCcceEEEEeeecce
Q psy10619 162 SFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 162 ~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
...++||+||++|+|+++.+++++.
T Consensus 162 ---~~~~lvEe~i~~g~e~sv~~~~d~~ 186 (365)
T 2z04_A 162 ---EESFIIEEFVKFEAEISCIGVRDRE 186 (365)
T ss_dssp ------CEEEECCCCSEEEEEEEEECTT
T ss_pred ---CCCEEEEccCCCCEEEEEEEEECCC
Confidence 4679999999978999999998743
No 50
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=99.86 E-value=5.4e-22 Score=167.59 Aligned_cols=136 Identities=21% Similarity=0.290 Sum_probs=116.9
Q ss_pred HhCCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHH
Q psy10619 43 QTRADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARD 121 (246)
Q Consensus 43 ~~~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~ 121 (246)
..++|+|++.. |..+|+..++..++..|+|++|++..++.+++||..++++|+++|||+|++. .+.+.+++.. +.
T Consensus 88 ~~~~D~v~~~~~g~~ged~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~--~~ 163 (343)
T 1e4e_A 88 INHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFW--VINKDDRPVA--AT 163 (343)
T ss_dssp EEECSEEEECCCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEE--EECTTCCCCG--GG
T ss_pred cccCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCcCCEE--EEechhhhhh--hc
Confidence 45799999985 4556777889999999999999999999999999999999999999999975 4555544321 56
Q ss_pred hCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 122 IGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 122 ~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
++||+||||..+++|.|+.++++.+|+..+++.+.. + +..+|||+||+ |+|+++.+++++.
T Consensus 164 ~~~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~-----~-~~~~lvEe~I~-G~E~~v~vl~~~~ 224 (343)
T 1e4e_A 164 FTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQ-----Y-DSKILIEQAVS-GCEVGCAVLGNSA 224 (343)
T ss_dssp SCSCEEEEESSCCTTTTCEEECSGGGHHHHHHHHTT-----T-CSSEEEEECCC-SEEEEEEEEEETT
T ss_pred cCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh-----c-CCcEEEEeCcC-CeEEEEEEEeCCC
Confidence 899999999999999999999999999999877542 2 46899999999 8999999998764
No 51
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=99.85 E-value=1.7e-21 Score=165.68 Aligned_cols=127 Identities=20% Similarity=0.362 Sum_probs=110.5
Q ss_pred CCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHH--HHHHHHHH
Q psy10619 45 RADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDAD--HCVEIARD 121 (246)
Q Consensus 45 ~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~--~~~~~~~~ 121 (246)
++|+|++.. |..+++..++..++..|+|++|++..++.+++||..++++|+++|||+|++. .+.+.+ ++.+ .+.
T Consensus 107 ~~D~v~~~lhg~~gedg~i~~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~--~~~~~~~~~~~~-~~~ 183 (367)
T 2pvp_A 107 ELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEASVLSYNKYLTKLYAKDLGIKTLDYV--LLNEKNRANALD-LMN 183 (367)
T ss_dssp ECCSEEECCCSTTTTSSHHHHHHHHTTCCEESCCHHHHHHHHSHHHHHHHHHHHTCBCCCCE--EECTTTGGGHHH-HCC
T ss_pred CCCEEEEcCCCCCccHHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCcCCCCEE--EEeCCchHHHHH-Hhc
Confidence 689999885 5567888889999999999999999999999999999999999999999975 456554 5555 667
Q ss_pred hCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCc-ceEE
Q psy10619 122 IGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNP-RHIE 181 (246)
Q Consensus 122 ~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g-~e~~ 181 (246)
++||+||||..+++|.|+.++++.+|+..+++.++. + +..+|||+||+ | +|++
T Consensus 184 lg~PvvVKP~~g~ss~Gv~~v~~~~el~~a~~~~~~-----~-~~~vlVEe~I~-G~~E~s 237 (367)
T 2pvp_A 184 FNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFE-----Y-SKEVLIEPFIQ-GVKEYN 237 (367)
T ss_dssp SCSCEEEEESSCCTTTTCEEESSTTSHHHHHHHHTT-----T-CSCEEEEECCT-TCEEEE
T ss_pred cCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHh-----c-CCcEEEEeCCC-CCceee
Confidence 899999999999999999999999999999887542 2 56899999999 7 9955
No 52
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=99.84 E-value=9.1e-21 Score=157.29 Aligned_cols=135 Identities=22% Similarity=0.295 Sum_probs=113.9
Q ss_pred HhCCCEEcccc-ccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHH----
Q psy10619 43 QTRADAVHPGY-GFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVE---- 117 (246)
Q Consensus 43 ~~~~d~v~~~~-~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~---- 117 (246)
+.++|++++.. +...++..+...++..|++++|++++++.+++||..++++|+++|||+|++. .+.+. ++.+
T Consensus 52 ~~~~d~v~~~~~~~~~e~~~~~~~~e~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gi~~p~~~--~~~~~-~~~~~~~~ 128 (306)
T 1iow_A 52 SMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWV--ALTRA-EFEKGLSD 128 (306)
T ss_dssp TTTEEEEEECCCSTTTSSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEE--EEEHH-HHHHCCCT
T ss_pred ccCCCEEEEcCCCCCCcchHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCeE--EEchh-hhhccchh
Confidence 35677777664 3334666778889999999999999999999999999999999999999975 56666 6665
Q ss_pred ----HHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeec
Q psy10619 118 ----IARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTY 187 (246)
Q Consensus 118 ----~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d 187 (246)
++++++||+|+||..+++|+|+.++++.+++..+++.+.. + ...++||+||+ |+|+++.++++
T Consensus 129 ~~~~~~~~~~~p~vvKP~~g~~~~gv~~v~~~~el~~~~~~~~~-----~-~~~~lvee~i~-g~e~~v~~~~g 195 (306)
T 1iow_A 129 KQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQ-----H-DEEVLIEKWLS-GPEFTVAILGE 195 (306)
T ss_dssp HHHHHHHTTCSSEEEEETTCCTTTTCEEESSGGGHHHHHHHHTT-----T-CSEEEEEECCC-CCEEEEEEETT
T ss_pred hhhhHHhccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh-----h-CCCEEEEeCcC-CEEEEEEEECC
Confidence 6778999999999999999999999999999998876532 2 47899999999 89999999954
No 53
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.3e-21 Score=137.85 Aligned_cols=105 Identities=68% Similarity=1.074 Sum_probs=89.5
Q ss_pred HHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHh
Q psy10619 82 RGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAA 161 (246)
Q Consensus 82 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~ 161 (246)
.+++||..++++|+++|||+|+++...+.+.+++.++++.++||+|+||.++++|+|+.+++|.+++..+++.+......
T Consensus 4 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~~~~~~gv~~v~~~~el~~~~~~~~~~~~~ 83 (108)
T 2cqy_A 4 GSSGDKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAAS 83 (108)
T ss_dssp CCCCCCCCSTTCCCSSCCCCCSCCCSCBSSHHHHHHHHHHHCSSEEEEETTSCCTTTCEEESSHHHHHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHhcCCCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHHh
Confidence 46899999999999999999997422578899998888999999999999999999999999999999999887654333
Q ss_pred hcCCCceEEEecccCcceEEEEeee
Q psy10619 162 SFGDDRILVEKFIKNPRHIEIQGTT 186 (246)
Q Consensus 162 ~~~~~~~lve~~i~~g~e~~v~v~~ 186 (246)
.++...+|||+||++.+|++|.+++
T Consensus 84 ~~~~~~~lvee~i~g~~E~~v~v~g 108 (108)
T 2cqy_A 84 SFGDDRLLIEKFIDNPRHISGPSSG 108 (108)
T ss_dssp HTSSCCEEEEECCSSSSCCCSCCCC
T ss_pred hcCCCcEEEeeccCCCcEEEEEecC
Confidence 3445789999999955699988764
No 54
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=99.82 E-value=2.1e-20 Score=157.91 Aligned_cols=127 Identities=13% Similarity=0.139 Sum_probs=110.5
Q ss_pred CCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCC
Q psy10619 45 RADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGY 124 (246)
Q Consensus 45 ~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~ 124 (246)
++|+|++.+++.+.. ..+.+++.| .++|+++++.+++||..+|++|+++|||+|++. .+.+.+++.++++++||
T Consensus 42 ~~d~it~e~e~v~~~--~l~~l~~~~--~v~p~~~a~~~~~DK~~~k~~l~~~GIptp~~~--~v~~~~e~~~~~~~~G~ 115 (355)
T 3eth_A 42 QQSVITAEIERWPET--ALTRQLARH--PAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQ--LLAERSEWPAVFDRLGE 115 (355)
T ss_dssp TTSEEEESCSCCCCC--HHHHHHHTC--TTBTTTTHHHHHHSHHHHHHHHHHTTCCBCCEE--EECCGGGHHHHHHHHCS
T ss_pred cCCEEEECcCCcCHH--HHHHHHhcC--CcCCCHHHHHHhcCHHHHHHHHHHCccCCCCEE--EECCHHHHHHHHHHcCC
Confidence 899999998776544 566777777 467999999999999999999999999999975 68899999999999999
Q ss_pred cEEEEeccC-CCCceeEEeCC--HHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 125 PVMIKASAG-GGGKGMRIANN--DQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 125 P~vvKp~~g-~g~~gv~~v~~--~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
|+||||..+ ++|+|++++++ .+|+.+++ + . .++||+||++++|+++.++++..
T Consensus 116 P~VvKp~~~G~~GkGv~~v~~~~~~el~~a~----------~-~-~vivEe~I~~~~Eisv~v~~~~~ 171 (355)
T 3eth_A 116 LAIVKRRTGGYDGRGQWRLRANETEQLPAEC----------Y-G-ECIVEQGINFSGEVSLVGARGFD 171 (355)
T ss_dssp EEEEEESSSCCTTTTEEEEETTCGGGSCGGG----------T-T-TEEEEECCCCSEEEEEEEEECTT
T ss_pred CEEEEecCCCCCCCeEEEEcCCCHHHHHHHh----------h-C-CEEEEEccCCCcEEEEEEEEcCC
Confidence 999999985 78899999999 99987743 2 2 69999999988999999998654
No 55
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=99.79 E-value=1.7e-19 Score=147.57 Aligned_cols=139 Identities=15% Similarity=0.245 Sum_probs=106.3
Q ss_pred hCCC-EEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHh
Q psy10619 44 TRAD-AVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDI 122 (246)
Q Consensus 44 ~~~d-~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~ 122 (246)
.++| ++++.++.. +...+++.++..|++++ ++++++..++||..++++|+++|||+|++. .+.+.+++.++++++
T Consensus 47 ~~~d~~~~~~~~~~-~~~~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gi~~p~~~--~~~~~~~~~~~~~~~ 122 (280)
T 1uc8_A 47 EGVTVALERCVSQS-RGLAAARYLTALGIPVV-NRPEVIEACGDKWATSVALAKAGLPQPKTA--LATDREEALRLMEAF 122 (280)
T ss_dssp TTCCEEEECCSSHH-HHHHHHHHHHHTTCCEE-SCHHHHHHHHBHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHHHH
T ss_pred CCCCEEEECCccch-hhHHHHHHHHHCCCcee-CCHHHHHHhCCHHHHHHHHHHcCcCCCCeE--eeCCHHHHHHHHHHh
Confidence 4678 566554321 33467788899999998 569999999999999999999999999975 688999998888999
Q ss_pred CCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccC-cceEEEEeeecc
Q psy10619 123 GYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKN-PRHIEIQGTTYK 188 (246)
Q Consensus 123 ~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~-g~e~~v~v~~d~ 188 (246)
+||+|+||..+++|+|+.++++.+++..+++.+.. ........+++|+||++ +.|+++.++++.
T Consensus 123 ~~p~vvKp~~g~~~~gv~~v~~~~el~~~~~~~~~--~~~~~~~~~lvqe~i~~~~~e~~v~v~~~~ 187 (280)
T 1uc8_A 123 GYPVVLKPVIGSWGRLLAXXXXXXXXXXXXXXKEV--LGGFQHQLFYIQEYVEKPGRDIRVFVVGER 187 (280)
T ss_dssp CSSEEEECSBCCBCSHHHHHHHHHC--------------CTTTTCEEEEECCCCSSCCEEEEEETTE
T ss_pred CCCEEEEECCCCCcccceecccccccchhhhhHhh--hcccCCCcEEEEeccCCCCceEEEEEECCE
Confidence 99999999999999999999999999888776411 01112468999999997 689999887654
No 56
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.78 E-value=1.1e-19 Score=165.95 Aligned_cols=149 Identities=15% Similarity=0.141 Sum_probs=118.7
Q ss_pred CCHHHHHHHHHHhCCCEEcccccc-CCCCHHHHHHHHH--cCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGF-LSENASFVSRLKE--EGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGI 108 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~-~~e~~~~~~~~~~--~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~ 108 (246)
.+.+.|+++|+++++|+++.+.+. +... .....+.. .|..+.+++..++.+++||..++++|+++|||+|++. .
T Consensus 433 ~st~~Iv~~A~~~gid~~vlg~e~~l~~l-g~~~~~~~ig~~~~t~~~s~~aa~~~~DK~~tk~lL~~~GIPvP~~~--~ 509 (757)
T 3ln7_A 433 LSTQALLFDVIQKGIHTEILDENDQFLCL-KYGDHIEYVKNGNMTSHDSYISPLIMENKVVTKKVLQKAGFNVPQSV--E 509 (757)
T ss_dssp HHHHHHHHHHHHHTCEEEEEETTTTEEEE-EETTEEEEEETTTBCSSSBSHHHHHHHHSHHHHHHHHHHTCCCCCEE--E
T ss_pred CCHHHHHHHHHHhCCCEEEECCCHHHHHh-cccccceeeccCccCCCCHHHHHHHhcCHHHHHHHHHHCCcCCCCEE--E
Confidence 567899999999999999877411 0000 00011111 3555667788999999999999999999999999975 6
Q ss_pred cCCHHHHHHHH-HHhCCcEEEEeccCCCCceeEEe----CCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEE
Q psy10619 109 IRDADHCVEIA-RDIGYPVMIKASAGGGGKGMRIA----NNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQ 183 (246)
Q Consensus 109 ~~~~~~~~~~~-~~~~~P~vvKp~~g~g~~gv~~v----~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~ 183 (246)
+.+.+++.+++ +.+|||+||||..|++|+||.++ ++.+++..+++.+... +..++||+||+ |+|++|.
T Consensus 510 ~~~~~ea~~~~~~~~g~PvVVKP~~g~~G~GV~iv~~~v~~~eel~~al~~a~~~------~~~vlVEefI~-G~Ei~v~ 582 (757)
T 3ln7_A 510 FTSLEKAVASYALFENRAVVIKPKSTNYGLGITIFQQGVQNREDFAKALEIAFRE------DKEVMVEDYLV-GTEYRFF 582 (757)
T ss_dssp ESCHHHHHHGGGGSSSSCEEEEESSCSTTTTCEECSSCCCCHHHHHHHHHHHHHH------CSSEEEEECCC-SEEEEEE
T ss_pred ECCHHHHHHHHHHhcCCCEEEEeCCCCCCCCeEEecCCCCCHHHHHHHHHHHHhc------CCcEEEEEcCC-CcEEEEE
Confidence 88998887766 67899999999999999999998 8999999999876532 46799999999 8999999
Q ss_pred eeeccee
Q psy10619 184 GTTYKFL 190 (246)
Q Consensus 184 v~~d~~~ 190 (246)
+++++..
T Consensus 583 Vlggkvv 589 (757)
T 3ln7_A 583 VLGDETL 589 (757)
T ss_dssp EETTEEE
T ss_pred EECCEEE
Confidence 9977543
No 57
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=99.71 E-value=3.5e-17 Score=138.32 Aligned_cols=159 Identities=16% Similarity=0.205 Sum_probs=109.8
Q ss_pred cCCCCCCCh---hhhccceeEEcCCCCcCCCCCCH--HHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCC
Q psy10619 3 FPDPCVFQR---HVKLADEAVCIGPPVAAQSYINV--DKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPT 77 (246)
Q Consensus 3 ~~d~~~~~~---~~~~ad~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~ 77 (246)
+.|.+++.+ +...||+++..+ .+.+. +.+++.+++.+ ++|.|.... .....+...+++.|+++++ +
T Consensus 45 ~vd~~~~~p~~~~~~~ad~~~~~d------~~~d~~~~~~l~~l~~~~-~vV~pe~~~-v~~~gl~~l~~~~g~~v~g-~ 115 (361)
T 2r7k_A 45 CITMKGRDVPYKRFKVADKFIYVD------NFSDIKNEEIQEKLRELN-SIVVPHGSF-IAYCGLDNVENSFLVPMFG-N 115 (361)
T ss_dssp EEECTTSCHHHHHTTCCSEEEECS------SGGGGGSHHHHHHHHHTT-EEECCBHHH-HHHHCHHHHHHTCCSCBBS-C
T ss_pred EEECCCCCCcccccccCceEEECC------CcccccHHHHHHHHHHcC-CEEEeCchh-hhHHHHHHHHHHcCCCcCC-C
Confidence 345555556 788899998764 13331 45555555554 666554311 0000122334589999997 7
Q ss_pred HHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHH
Q psy10619 78 AECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQ 157 (246)
Q Consensus 78 ~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~ 157 (246)
..++.+..||...+++|+++|||+|++ +.+.+++ +||+||||..+++|+|+++++|.+|+.++++.+..
T Consensus 116 ~~a~~~e~~k~~~k~~l~~~GIptp~~----~~~~~e~-------~~PvVVK~~~~a~GkGv~v~~s~ee~~~a~~~~~~ 184 (361)
T 2r7k_A 116 RRILRWESERSLEGKLLREAGLRVPKK----YESPEDI-------DGTVIVKFPGARGGRGYFIASSTEEFYKKAEDLKK 184 (361)
T ss_dssp GGGGGTTTCHHHHHHHHHHTTCCCCCE----ESSGGGC-------CSCEEEECSCCCC---EEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHcCcCCCCE----eCCHHHc-------CCCEEEeeCCCCCCCCEEEECCHHHHHHHHHHHHh
Confidence 888899999999999999999999984 3555543 69999999999999999999999999999988753
Q ss_pred HHHhhcC---CCceEEEecccCcceEEEEe
Q psy10619 158 EAAASFG---DDRILVEKFIKNPRHIEIQG 184 (246)
Q Consensus 158 ~~~~~~~---~~~~lve~~i~~g~e~~v~v 184 (246)
.. .++ ...++||||++ |.|+++..
T Consensus 185 ~~--~~~~~~~~~viIEEfl~-G~e~s~~~ 211 (361)
T 2r7k_A 185 RG--ILTDEDIANAHIEEYVV-GTNFCIHY 211 (361)
T ss_dssp TT--SCCHHHHHHCEEEECCC-SEEEEEEE
T ss_pred cc--ccccCCCCeEEEEeccc-eEEeeEEE
Confidence 21 010 13599999999 88887443
No 58
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.70 E-value=1.4e-17 Score=152.47 Aligned_cols=148 Identities=16% Similarity=0.107 Sum_probs=111.9
Q ss_pred CCHHHHHHHHHHhCCCEEcccccc--CCCCHHHHHHHHHcCCeEeCCCH-HHHHHhcCHHHHHHHHHHhCCCCCCCCccc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGF--LSENASFVSRLKEEGVVFIGPTA-ECIRGMGDKLESKKLAKEAGVNIIPGFNGI 108 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~--~~e~~~~~~~~~~~g~~~~g~~~-~~~~~~~dK~~~~~~l~~~gip~p~~~~~~ 108 (246)
.+.+.+++.+++.++++++...+. ..........+...|. ++|++. .++..++||..++++|+++|||+|++. .
T Consensus 428 ~S~~~l~~aA~~~Gi~v~vidp~~~l~~l~~~~~~~~~~~g~-itg~~~~~a~~~~~DK~~tk~lL~~~GIPvP~~~--~ 504 (750)
T 3ln6_A 428 LSTQLLLFDVIQKGVNFEVLDEQDQFLKLWHNSHIEYVKNGN-MTSKDNYIVPLAMANKVVTKKILDEKHFPTPFGD--E 504 (750)
T ss_dssp HHHHHHHHHHHHHTCEEEESCSSSCEEEEEETTEEEEEETTT-BCTTSCTHHHHHTTTSHHHHHHHHHTTCCCCCCC--C
T ss_pred ccHHHHHHHHHhCCCCEEEECCCchHhhhccCCCcEEEecCC-eeCCCHHHHHHHHhCHHHHHHHHHHCCcCCCCEE--E
Confidence 467899999999999998766421 1000000000000121 234443 456677799999999999999999976 6
Q ss_pred cCCHHHHHHHH-HHhCCcEEEEeccCCCCceeEEeC---CHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEe
Q psy10619 109 IRDADHCVEIA-RDIGYPVMIKASAGGGGKGMRIAN---NDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQG 184 (246)
Q Consensus 109 ~~~~~~~~~~~-~~~~~P~vvKp~~g~g~~gv~~v~---~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v 184 (246)
+.+.+++.+++ ..+|||+||||..|++|+||.+++ +.+++.++++.+... ...++||+||+ |+|++|.+
T Consensus 505 ~~~~~ea~~~~~~~~g~PvVVKP~~G~~G~GV~iv~~~~s~eel~~a~~~~~~~------~~~vlVEefI~-G~E~~v~V 577 (750)
T 3ln6_A 505 FTDRKEALNYFSQIQDKPIVVKPKSTNFGLGISIFKTSANLASYEKAIDIAFTE------DSAILVEEYIE-GTEYRFFV 577 (750)
T ss_dssp EETTTTHHHHHHHSSSSCEEEEETTCCSSSSCEEESSCCCHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEE
T ss_pred ECCHHHHHHHHHHhcCCcEEEEeCCCCCCCCEEEEeCCCCHHHHHHHHHHHHhh------CCcEEEEeccC-CCEEEEEE
Confidence 77888887777 678999999999999999999998 999999999876542 57899999999 89999999
Q ss_pred eecce
Q psy10619 185 TTYKF 189 (246)
Q Consensus 185 ~~d~~ 189 (246)
+++..
T Consensus 578 vgg~v 582 (750)
T 3ln6_A 578 LEGDC 582 (750)
T ss_dssp ETTEE
T ss_pred ECCEE
Confidence 97754
No 59
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=99.69 E-value=1.3e-16 Score=127.87 Aligned_cols=103 Identities=22% Similarity=0.274 Sum_probs=90.1
Q ss_pred hcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccC-----CCCceeEE-eCCHHHHHHHHHHHHH
Q psy10619 84 MGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAG-----GGGKGMRI-ANNDQEAIEGFKLSSQ 157 (246)
Q Consensus 84 ~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g-----~g~~gv~~-v~~~~el~~~~~~~~~ 157 (246)
..||..++++|+++|||+|++. .+++.+++.++++++|||+|+||..+ +++.|+.+ ++|.+++.++++.+..
T Consensus 19 ~l~k~~~k~ll~~~GIp~p~~~--~~~~~~ea~~~a~~lg~PvvvKp~~~~~~~r~~~gGv~~~v~~~~el~~a~~~~~~ 96 (238)
T 1wr2_A 19 AMVEYEAKQVLKAYGLPVPEEK--LAKTLDEALEYAKEIGYPVVLKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHE 96 (238)
T ss_dssp EECHHHHHHHHHTTTCCCCCCE--EESSHHHHHHHHHHHCSSEEEEEECTTCCCHHHHTCEEEEECSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCcCCCCeE--EeCCHHHHHHHHHHhCCCEEEEEccCCCCcCCccCCEEEeCCCHHHHHHHHHHHHH
Confidence 4699999999999999999976 68899999998999999999999998 67788988 7999999999999876
Q ss_pred HHHhhcC---CCceEEEecccCcceEEEEeeecc
Q psy10619 158 EAAASFG---DDRILVEKFIKNPRHIEIQGTTYK 188 (246)
Q Consensus 158 ~~~~~~~---~~~~lve~~i~~g~e~~v~v~~d~ 188 (246)
.....++ ...++||+|+++|+|+++.++.|.
T Consensus 97 ~~~~~~~~~~~~~vlVEe~i~~g~E~~v~v~~d~ 130 (238)
T 1wr2_A 97 NAKKYRPDAEILGVLVAPMLKPGREVIIGVTEDP 130 (238)
T ss_dssp HHHHHCTTCCCCEEEEEECCCCCEEEEEEEEEET
T ss_pred hhhhhCCCCccceEEEEECCCCCeEEEEEEEeCC
Confidence 5443332 267999999998899999999987
No 60
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=99.69 E-value=8.4e-17 Score=134.93 Aligned_cols=145 Identities=16% Similarity=0.172 Sum_probs=100.0
Q ss_pred hhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHH
Q psy10619 12 HVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESK 91 (246)
Q Consensus 12 ~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~ 91 (246)
+...+|..+..+. +.+ +. +++ .+|+|++..+.. .....+.++..|++++ +++.++.+++||..++
T Consensus 41 ~~~~~~~~~~~~~------~~d-~~---l~~--~~d~i~~~~e~~--~~~~~~~le~~g~~~~-~~~~~~~~~~dK~~~~ 105 (334)
T 2r85_A 41 KYFPVADYFIEEK------YPE-EE---LLN--LNAVVVPTGSFV--AHLGIELVENMKVPYF-GNKRVLRWESDRNLER 105 (334)
T ss_dssp TTSCCCSEEECSS------CCH-HH---HHH--TTEEECCCTTHH--HHHCHHHHHTCCSCBB-SCTTHHHHHHSHHHHH
T ss_pred cccccCceEecCC------cCh-HH---hcc--cCCEEEECcchh--hhhHHHHHHHcCCCcc-CCHHHHHHHHhHHHHH
Confidence 4556787776531 222 22 222 358887664211 0122345678999987 5578999999999999
Q ss_pred HHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhc-CCCceEE
Q psy10619 92 KLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASF-GDDRILV 170 (246)
Q Consensus 92 ~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~-~~~~~lv 170 (246)
++|+++|||+|++ +.+.++ ++||+|+||..++||+|+.++++.+++..+++.+.... .+ ....++|
T Consensus 106 ~~l~~~gip~p~~----~~~~~~-------l~~P~vvKP~~g~~s~Gv~~v~~~~el~~~~~~~~~~~--~~~~~~~~lv 172 (334)
T 2r85_A 106 KWLKKAGIRVPEV----YEDPDD-------IEKPVIVKPHGAKGGKGYFLAKDPEDFWRKAEKFLGIK--RKEDLKNIQI 172 (334)
T ss_dssp HHHHHTTCCCCCB----CSCGGG-------CCSCEEEEECC----TTCEEESSHHHHHHHHHHHHCCC--SGGGCCSEEE
T ss_pred HHHHHcCCCCCCc----cCChHH-------cCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhhc--ccCCCCcEEE
Confidence 9999999999995 344443 57999999999999999999999999999887764210 01 1367999
Q ss_pred EecccCcceEEEEee
Q psy10619 171 EKFIKNPRHIEIQGT 185 (246)
Q Consensus 171 e~~i~~g~e~~v~v~ 185 (246)
|+||+ |.|+++.++
T Consensus 173 ee~i~-G~e~~~~~~ 186 (334)
T 2r85_A 173 QEYVL-GVPVYPHYF 186 (334)
T ss_dssp EECCC-CEEEEEEEE
T ss_pred EeccC-CceeEEEEe
Confidence 99999 889885443
No 61
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=99.67 E-value=5.1e-16 Score=129.77 Aligned_cols=126 Identities=12% Similarity=0.235 Sum_probs=100.9
Q ss_pred CCCEEccccccCCCCHHHHHHHHH-----cCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHH
Q psy10619 45 RADAVHPGYGFLSENASFVSRLKE-----EGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIA 119 (246)
Q Consensus 45 ~~d~v~~~~~~~~e~~~~~~~~~~-----~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~ 119 (246)
++|++++.... +...+...++. .|++++ ++++++..++||..++++|+++|||+|+++ .+.+.+++.+++
T Consensus 55 ~~d~v~~~~~~--~~~~~~~~l~~~~~~~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gi~~P~~~--~~~~~~~~~~~~ 129 (324)
T 1z2n_X 55 EPNAIITKRTH--PVGKMADEMRKYEKDHPKVLFL-ESSAIHDMMSSREEINALLIKNNIPIPNSF--SVKSKEEVIQLL 129 (324)
T ss_dssp CCSEEEECCSC--SSSHHHHHHHHHHHHCTTSEEE-TCHHHHHHHTBHHHHHHHHHHTTCCCSCEE--EESSHHHHHHHH
T ss_pred CceEEEEeccc--hHHHHHHHHHHHHHhCCCCeEe-CCHHHHHHHhCHHHHHHHHHHCCCCCCCEE--EeCCHHHHHHHH
Confidence 68888876522 22233444443 788875 899999999999999999999999999975 678888888887
Q ss_pred HHh--CCcEEEEeccCCCC---ceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccC-cceEEEEeeecc
Q psy10619 120 RDI--GYPVMIKASAGGGG---KGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKN-PRHIEIQGTTYK 188 (246)
Q Consensus 120 ~~~--~~P~vvKp~~g~g~---~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~-g~e~~v~v~~d~ 188 (246)
+.. +||+|+||..|.|| .|+.++++.+++.. . ...+++|+||++ |.++++.++++.
T Consensus 130 ~~~~~~~P~vvKP~~g~g~~~s~gv~~v~~~~~l~~------------~-~~~~lvqe~i~~~g~~~~v~v~g~~ 191 (324)
T 1z2n_X 130 QSKQLILPFIVKPENAQGTFNAHQMKIVLEQEGIDD------------I-HFPCLCQHYINHNNKIVKVFCIGNT 191 (324)
T ss_dssp HTTCSCSSEEEEESBCSSSSGGGEEEEECSGGGGTT------------C-CSSEEEEECCCCTTCEEEEEEETTE
T ss_pred HHcCCCCCEEEeeCCCCCCccceeeEEEeCHHHHhh------------c-CCCEEEEEccCCCCcEEEEEEECCE
Confidence 774 49999999999888 99999999887642 1 467999999985 789999887654
No 62
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=99.66 E-value=1.4e-16 Score=132.13 Aligned_cols=117 Identities=15% Similarity=0.157 Sum_probs=88.8
Q ss_pred HHHHHHHHHhCCCEEccc-cccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHH
Q psy10619 35 DKIIDAIRQTRADAVHPG-YGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDAD 113 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~-~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~ 113 (246)
+.+.+++++ +|++++. .+.......+.+.++..| +++|++++++++++||..++++|++ |||+|+++ +
T Consensus 61 ~~l~~~~~~--~D~~~~i~~~ed~~l~~~~~~l~~~g-~~~g~~~~~~~~~~dK~~~~~~l~~-Gip~p~~~---~---- 129 (305)
T 3df7_A 61 DSMEKYLEK--SDAFLIIAPEDDFLLYTLTKKAEKYC-ENLGSSSRAIAVTSDKWELYKKLRG-EVQVPQTS---L---- 129 (305)
T ss_dssp GGHHHHHTT--CSEEEEECCCGGGHHHHHHHHHHTTS-EESSCCHHHHHHHTSHHHHHHHHTT-TSCCCCEE---S----
T ss_pred HHHHHHHHh--cCEEEEEccCCcHHHHHHHHHHHhcC-CccCCCHHHHHHhcCHHHHHHHHHh-CCCCCCEe---c----
Confidence 566777655 7776654 221111124555666667 7899999999999999999999999 99999964 2
Q ss_pred HHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecc
Q psy10619 114 HCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYK 188 (246)
Q Consensus 114 ~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~ 188 (246)
..++||+|+||.+|+||+|+.++++ ....+++|+||+ |+|+++.++.++
T Consensus 130 ------~~~~~P~vvKP~~g~gs~Gv~~v~~-------------------~~~~~lvEe~I~-G~e~sv~v~~g~ 178 (305)
T 3df7_A 130 ------RPLDCKFIIKPRTACAGEGIGFSDE-------------------VPDGHIAQEFIE-GINLSVSLAVGE 178 (305)
T ss_dssp ------SCCSSSEEEEESSCC----CBCCSS-------------------CCTTEEEEECCC-SEEEEEEEEESS
T ss_pred ------ccCCCCEEEEeCCCCCCCCEEEEec-------------------CCCCEEEEeccC-CcEEEEEEEeCC
Confidence 2578999999999999999999988 147899999999 899999999754
No 63
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=99.65 E-value=1.3e-15 Score=125.53 Aligned_cols=135 Identities=19% Similarity=0.171 Sum_probs=105.7
Q ss_pred hCCCEEccccccCC--C---CHHHHHHHHHcCCeEeCCCHHHHHHhcCH----HHHHHHHHHhCC---CCCCCCccccCC
Q psy10619 44 TRADAVHPGYGFLS--E---NASFVSRLKEEGVVFIGPTAECIRGMGDK----LESKKLAKEAGV---NIIPGFNGIIRD 111 (246)
Q Consensus 44 ~~~d~v~~~~~~~~--e---~~~~~~~~~~~g~~~~g~~~~~~~~~~dK----~~~~~~l~~~gi---p~p~~~~~~~~~ 111 (246)
..+|++++..+... + ...+...|+..|++++ ++++++..|.|| ..+.++|+++|+ |.|+.. ...+
T Consensus 67 ~~~D~vi~R~~~~~~~~~~~~r~vl~~le~~Gvpvi-N~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~--~~~~ 143 (309)
T 1i7n_A 67 FRPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSI-NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQT--YYPN 143 (309)
T ss_dssp ECCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCE--EESS
T ss_pred ccCCEEEEecccccccccchHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCCEE--eeCC
Confidence 35899987754322 1 1355677999999999 999999999999 667888899999 865543 2333
Q ss_pred HHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 112 ADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 112 ~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
..+ ..+.+|||+|+||..|+.|+||.++++.++++..+..+... +..+++||||+.|+++++.++++...
T Consensus 144 ~~~---~~~~~g~PvVvK~~~Gs~G~GV~lv~~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VvGg~v~ 213 (309)
T 1i7n_A 144 HRE---MLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALT------QTYATAEPFIDAKYDIRVQKIGNNYK 213 (309)
T ss_dssp GGG---GSSCCCSSEEEEESSCSTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETTEEE
T ss_pred hhh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeecCCCceEEEEEECCEEE
Confidence 333 34457999999999999999999999999998888654431 35688999999899999999988864
No 64
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=99.61 E-value=4e-17 Score=135.54 Aligned_cols=146 Identities=13% Similarity=0.109 Sum_probs=93.7
Q ss_pred CcCCCCCCCh---hhhccceeEEcCCCCcCCCCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCH
Q psy10619 2 LFPDPCVFQR---HVKLADEAVCIGPPVAAQSYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTA 78 (246)
Q Consensus 2 v~~d~~~~~~---~~~~ad~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~ 78 (246)
++.|.+++++ +..+||+++.++. |.+ ++ ...|++++..++.. ....+.+++.|++++ ++.
T Consensus 28 iv~d~~~~~p~~~a~~~ad~~~~~~~------~~d------l~--~~~dvitpe~e~v~--~~~l~~le~~~~p~~-p~~ 90 (320)
T 2pbz_A 28 RLYVSPKRRPFYSSLPIVDDLVVAEE------MTS------IL--NDDGIVVPHGSFVA--YLGIEAIEKAKARFF-GNR 90 (320)
T ss_dssp EEEECTTTHHHHHTCTTCSEEEECSC------SCC------TT--CCSSBCCCBTTHHH--HSCHHHHHTCCSCCB-SCS
T ss_pred EEEECCCCCccchhhhcCCeEEECCc------HHH------HH--hcCCEEEecccchh--HHHHHHHHHcCCCcC-CCH
Confidence 3456666666 8889999998741 333 22 23477776653210 111334678999987 677
Q ss_pred HHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHH
Q psy10619 79 ECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQE 158 (246)
Q Consensus 79 ~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~ 158 (246)
+++....||...+++|+++|||+|+++ . .+++ .++||+||||+.++||+|+++++| +|+..+++.+
T Consensus 91 ~~l~~~~dr~~~~~~l~~~Gip~P~~~--~---~ee~-----~i~~PviVKp~~g~ggkG~~~v~~-eel~~~~~~~--- 156 (320)
T 2pbz_A 91 RFLKWETTFELQDKALEGAGIPRVEVV--E---PEDA-----KPDELYFVRIEGPRGGSGHFIVEG-SELEERLSTL--- 156 (320)
T ss_dssp SGGGGGSCHHHHHHHHHHHTCCBCCBC--C---SCCC-----CSSCCEEEECC------------C-EECSCCCC-----
T ss_pred HHHHHHHhHHHHHHHHHHCCcCCCCee--C---HhHc-----CcCCcEEEEECCCCCCCCEEEECh-HHHHHHHHhc---
Confidence 889999999999999999999999965 2 2332 479999999999999999999999 9997765442
Q ss_pred HHhhcCCCceEEEecccCcceEEEEee
Q psy10619 159 AAASFGDDRILVEKFIKNPRHIEIQGT 185 (246)
Q Consensus 159 ~~~~~~~~~~lve~~i~~g~e~~v~v~ 185 (246)
...++||+||+ |.++++.++
T Consensus 157 ------~~~~IiEEfI~-g~~~~~~~f 176 (320)
T 2pbz_A 157 ------EEPYRVERFIP-GVYLYVHFF 176 (320)
T ss_dssp --------CCEEEECCC-SCEEEEEEE
T ss_pred ------CCCEEEEeeec-eEecceeEE
Confidence 14699999999 777774443
No 65
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=99.60 E-value=4.2e-15 Score=123.97 Aligned_cols=134 Identities=16% Similarity=0.162 Sum_probs=104.4
Q ss_pred CCCEEccccccCC--C---CHHHHHHHHHcCCeEeCCCHHHHHHhcCH----HHHHHHHHHhCC---CCCCCCccccCCH
Q psy10619 45 RADAVHPGYGFLS--E---NASFVSRLKEEGVVFIGPTAECIRGMGDK----LESKKLAKEAGV---NIIPGFNGIIRDA 112 (246)
Q Consensus 45 ~~d~v~~~~~~~~--e---~~~~~~~~~~~g~~~~g~~~~~~~~~~dK----~~~~~~l~~~gi---p~p~~~~~~~~~~ 112 (246)
.+|++++..+... + ...+...|+..|++++ ++++++..|.|| ..+.++|.++|+ |.++.. ...+.
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~Gvpvi-N~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t--~~~~~ 161 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAV-NSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQT--FFPNH 161 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEE-SCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCE--EESSS
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCceec-CCHHHHHhhCCchHHHHHHHHHHHHCCCCCCCCCCEE--ecCch
Confidence 6899987754311 1 1355677999999999 999999999999 777888899999 865543 22332
Q ss_pred HHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 113 DHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 113 ~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
.+ ..+.+|||+|+||..|+.|+||.++++.++++..+..+... +..+++||||+.|+++++.++++...
T Consensus 162 ~~---~~~~~g~PvVvK~~~Gs~G~GV~lve~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VVGg~vv 230 (344)
T 2p0a_A 162 KP---MVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMA------KTYATTEAFIDSKYDIRIQKIGSNYK 230 (344)
T ss_dssp TT---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETTEEE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeccCCCccEEEEEECCEEE
Confidence 22 34467999999999999999999999999998877654421 35688999999889999999988864
No 66
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=99.60 E-value=1.7e-15 Score=125.78 Aligned_cols=131 Identities=11% Similarity=0.135 Sum_probs=102.5
Q ss_pred hCCCEEccccccCCC-----CHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHH
Q psy10619 44 TRADAVHPGYGFLSE-----NASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEI 118 (246)
Q Consensus 44 ~~~d~v~~~~~~~~e-----~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~ 118 (246)
.++|+|++......+ ...+.+.++..|++++ +++.++.++.||..++++|+ |+|++. .+.+.+++.++
T Consensus 78 ~~~d~v~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~----~~P~t~--~~~~~~~~~~~ 150 (316)
T 1gsa_A 78 ADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIV-NKPQSLRDCNEKLFTAWFSD----LTPETL--VTRNKAQLKAF 150 (316)
T ss_dssp GGSSEEEECCCCCCCHHHHHHHHHHHHHHHTTCEEE-SCHHHHHHCCTTGGGGGGTT----TSCCEE--EESCHHHHHHH
T ss_pred ccCCEEEEecCCCCchhhHHHHHHHHHHHHcCCeEe-cCHHHHHhhhhHHHHHhhhh----cCCCeE--EeCCHHHHHHH
Confidence 358999986532111 1145566778999987 78999999999999999987 999965 67889999888
Q ss_pred HHHhCCcEEEEeccCCCCceeEEeC-CHHHHHHHHHHHHHHHHhhcCCCceEEEecccC--cceEEEEeeec
Q psy10619 119 ARDIGYPVMIKASAGGGGKGMRIAN-NDQEAIEGFKLSSQEAAASFGDDRILVEKFIKN--PRHIEIQGTTY 187 (246)
Q Consensus 119 ~~~~~~P~vvKp~~g~g~~gv~~v~-~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~--g~e~~v~v~~d 187 (246)
++.++ |+|+||..|++|+|+.+++ +.+++..+++.+.. .....+++|+||++ +.|+++.+.++
T Consensus 151 ~~~~~-p~vvKP~~g~~g~Gv~~v~~~~~~l~~~~~~~~~-----~~~~~~lvqe~i~~~~~~~~~v~~~~g 216 (316)
T 1gsa_A 151 WEKHS-DIILKPLDGMGGASIFRVKEGDPNLGVIAETLTE-----HGTRYCMAQNYLPAIKDGDKRVLVVDG 216 (316)
T ss_dssp HHHHS-SEEEECSSCCTTTTCEEECTTCTTHHHHHHHHTT-----TTTSCEEEEECCGGGGGCEEEEEEETT
T ss_pred HHHcC-CEEEEECCCCCcccEEEecCChHHHHHHHHHHHh-----cCCceEEEecccCCCCCCCEEEEEECC
Confidence 88888 9999999999999999998 88888877765321 12367999999995 46777766543
No 67
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=99.59 E-value=9.7e-15 Score=123.95 Aligned_cols=134 Identities=18% Similarity=0.241 Sum_probs=104.2
Q ss_pred CCCEEccccccCC-----CCHHHHHHHHHcCCeEeCCCHHHHHHhcCH----HHHHHHHHHhCC---CCCCCCccccCCH
Q psy10619 45 RADAVHPGYGFLS-----ENASFVSRLKEEGVVFIGPTAECIRGMGDK----LESKKLAKEAGV---NIIPGFNGIIRDA 112 (246)
Q Consensus 45 ~~d~v~~~~~~~~-----e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK----~~~~~~l~~~gi---p~p~~~~~~~~~~ 112 (246)
.+|++++..+... ....+...|+..|++++ ++++++.+|.|| ..+.++|+++|+ |.++.. ...+.
T Consensus 180 ~~DaviiR~~~~~~~~~~~yr~vlr~lE~~Gvpvi-Ns~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t--~~~~~ 256 (422)
T 1pk8_A 180 KPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSV-NSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQT--FYPNH 256 (422)
T ss_dssp CCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCE--EESSG
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCceE--ecCch
Confidence 5888887754222 11355677999999999 999999999999 567778889999 755532 23333
Q ss_pred HHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeeccee
Q psy10619 113 DHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKFL 190 (246)
Q Consensus 113 ~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~~ 190 (246)
.+ .++.+|||+|+||..|+.|+||.++++.++++..+..+... +..+++||||+.|++++|.+++++..
T Consensus 257 ~~---~i~~~g~PvVvKp~~GS~G~GV~lve~~~~l~~ii~~~~~~------~~~~~vQEfI~~g~DIRv~VVGg~vv 325 (422)
T 1pk8_A 257 KE---MLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALT------KTYATAEPFIDAKYDVRVQKIGQNYK 325 (422)
T ss_dssp GG---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TSCEEEEECCCEEEEEEEEEETTEEE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEeCCHHHHHHHHHHHhcc------CceEEEEeecCCCceEEEEEECCEEE
Confidence 22 33457999999999999999999999999999888755431 35688999999889999999988864
No 68
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=99.48 E-value=7.2e-14 Score=119.25 Aligned_cols=102 Identities=22% Similarity=0.301 Sum_probs=84.8
Q ss_pred CHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCc----eeEEeCCHHHHHHHHHHHHHHHHh
Q psy10619 86 DKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGK----GMRIANNDQEAIEGFKLSSQEAAA 161 (246)
Q Consensus 86 dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~----gv~~v~~~~el~~~~~~~~~~~~~ 161 (246)
+.+..|++|+++|||+|++. .+++.+++.++++++|||+|+||....+++ ||.+++|.+|+.+++++++.....
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~--~~~s~eea~~aa~~lG~PvVvKa~~~~ggkg~~GGV~l~~s~ee~~~a~~~~~~~~~~ 81 (397)
T 3ufx_B 4 HEYQAKEILARYGVPVPPGK--VAYTPEEAKRIAEEFGKRVVIKAQVHVGGRGKAGGVKLADTPQEAYEKAQAILGMNIK 81 (397)
T ss_dssp CHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHHHHTSCEEEEECCSSSCTTTTTCEEEESSHHHHHHHHHHHTTCEET
T ss_pred CHHHHHHHHHHCCCCCCCeE--EECCHHHHHHHHHHcCCCEEEEEccccCCCCccceEEEeCCHHHHHHHHHHhhhhhcc
Confidence 56789999999999999975 789999999999999999999999854444 999999999999999887642110
Q ss_pred hcCCCceEEEecccCcceEEEEeeecce
Q psy10619 162 SFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 162 ~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
....+.++||+|++.++|+++.++.|..
T Consensus 82 g~~~~~vlVEe~v~~g~El~vgv~~D~~ 109 (397)
T 3ufx_B 82 GLTVKKVLVAEAVDIAKEYYAGLILDRA 109 (397)
T ss_dssp TEECCCEEEEECCCEEEEEEEEEEEETT
T ss_pred CCccceEEEEEeecCCeeEEEEEEecCC
Confidence 1113579999999989999999999864
No 69
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=99.47 E-value=5.8e-14 Score=118.07 Aligned_cols=106 Identities=15% Similarity=0.231 Sum_probs=84.6
Q ss_pred cCCeEeCCCHHHHHHhcCHHHHHHHHHHh-------CCCCCCCCccccCC--HHHHHHHHH--HhCCcEEEEeccCCC--
Q psy10619 69 EGVVFIGPTAECIRGMGDKLESKKLAKEA-------GVNIIPGFNGIIRD--ADHCVEIAR--DIGYPVMIKASAGGG-- 135 (246)
Q Consensus 69 ~g~~~~g~~~~~~~~~~dK~~~~~~l~~~-------gip~p~~~~~~~~~--~~~~~~~~~--~~~~P~vvKp~~g~g-- 135 (246)
.|++++ +++.++..+.||..|.++|.++ |||+|+++ .+.+ .+++.+... .++||+|+||..|.|
T Consensus 100 ~gv~vi-np~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t~--~~~~~~~~~~~~~~~~~~lg~P~VvKP~~g~Gs~ 176 (346)
T 2q7d_A 100 PETIVL-DPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPFM--ELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTN 176 (346)
T ss_dssp TTSEEE-SCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCEE--EECSCCCTTHHHHHHHTTCCSSEEEECSBCSSTT
T ss_pred CCeEEc-CCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCCEE--EEeCCCHHHHHHHHHhcCCCCCEEEEecCCCcce
Confidence 489988 9999999999999999999998 99999975 4544 244544443 578999999997643
Q ss_pred CceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccC-cceEEEEeeeccee
Q psy10619 136 GKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKN-PRHIEIQGTTYKFL 190 (246)
Q Consensus 136 ~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~-g~e~~v~v~~d~~~ 190 (246)
+.|+.++++.++|... ...++|||||+. |++++|.++++...
T Consensus 177 s~~v~~v~~~~~l~~~-------------~~~~lvQefI~~~G~dirv~VvG~~v~ 219 (346)
T 2q7d_A 177 SHEMAIVFNQEGLNAI-------------QPPCVVQNFINHNAVLYKVFVVGESYT 219 (346)
T ss_dssp CCEEEEECSGGGTTC---------------CCEEEEECCCCTTEEEEEEEETTEEE
T ss_pred eeeeEEecCHHHHHhc-------------CCCEEEEEeeCCCCeEEEEEEECCEEE
Confidence 6699999999887542 356999999974 88999999987643
No 70
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=99.47 E-value=1.1e-13 Score=117.92 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=85.6
Q ss_pred cCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCc-EEEEeccCCCCc----eeEEeCCHHHHHHHHHHHHHHH
Q psy10619 85 GDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYP-VMIKASAGGGGK----GMRIANNDQEAIEGFKLSSQEA 159 (246)
Q Consensus 85 ~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P-~vvKp~~g~g~~----gv~~v~~~~el~~~~~~~~~~~ 159 (246)
.+++.+|++|+++|||+|++. .+++.+++.++++++||| +|+||..+.|++ ||.+++|.+|+.+++++++...
T Consensus 3 l~E~~aK~lL~~~GIpvp~~~--~~~s~eea~~aa~~lG~P~vVvK~~~~~ggrg~~gGV~l~~s~eel~~a~~~~~~~~ 80 (388)
T 2nu8_B 3 LHEYQAKQLFARYGLPAPVGY--ACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKR 80 (388)
T ss_dssp CCHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHHHHCSSCEEEEECCSSSCTTTTTCEEEECSHHHHHHHHHHHTTSE
T ss_pred CCHHHHHHHHHHCCcCCCCee--EECCHHHHHHHHHHhCCCeEEEEEecCCCCCCccCCEEEECCHHHHHHHHHHHhhhh
Confidence 378899999999999999975 789999999999999999 999999865444 9999999999999998876421
Q ss_pred H-------hhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 160 A-------ASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 160 ~-------~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
. .....+.++||+|+++++|+++.++.|+.
T Consensus 81 ~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~v~~D~~ 117 (388)
T 2nu8_B 81 LVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRS 117 (388)
T ss_dssp ECCTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETT
T ss_pred hhccccCCCCcccceEEEEEccccCCcEEEEEEEecc
Confidence 0 00012479999999988999999999875
No 71
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=99.41 E-value=3.7e-13 Score=114.75 Aligned_cols=102 Identities=22% Similarity=0.311 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCC-cEEEEec--cCCCCc---------eeEEeCCHHHHHHHHH
Q psy10619 86 DKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGY-PVMIKAS--AGGGGK---------GMRIANNDQEAIEGFK 153 (246)
Q Consensus 86 dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~-P~vvKp~--~g~g~~---------gv~~v~~~~el~~~~~ 153 (246)
+++.+|++|+++|||+|++. .+.+.+++.++++++|| |+|+||. .|+.|+ ||.+++|.+|+.++++
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~--~~~s~~ea~~~a~~lg~~PvVvK~~i~~GGrGKg~~ks~~~GGV~l~~s~~e~~~a~~ 81 (395)
T 2fp4_B 4 QEYQSKKLMSDNGVKVQRFF--VADTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAK 81 (395)
T ss_dssp CHHHHHHHHHHTTCCCCCEE--EESSHHHHHHHHHHHTCSSEEEEECCSSSCGGGCEETTSCBCSEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcCCCCeE--EECCHHHHHHHHHHcCCCcEEEEEeeccCCCccCccccCCcCCEEEECCHHHHHHHHH
Confidence 67889999999999999975 78999999999999999 8999996 444443 4889999999999998
Q ss_pred HHHHHHH--hhc---C--CCceEEEecccCcceEEEEeeecce
Q psy10619 154 LSSQEAA--ASF---G--DDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 154 ~~~~~~~--~~~---~--~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
+++.... ... + .+.++||+|++.++|+++.++.|+.
T Consensus 82 ~~l~~~~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~i~~D~~ 124 (395)
T 2fp4_B 82 QMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRS 124 (395)
T ss_dssp TTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETT
T ss_pred HHhhcchhhhccCCCCCccceEEEEEccCCceeEEEEEEEccc
Confidence 8764210 000 1 2469999999989999999999875
No 72
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=98.99 E-value=2.6e-11 Score=98.04 Aligned_cols=138 Identities=12% Similarity=0.047 Sum_probs=88.4
Q ss_pred CCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHH------------
Q psy10619 46 ADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDAD------------ 113 (246)
Q Consensus 46 ~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~------------ 113 (246)
+|++++.++.--......+.++..+..++ ++..+..+++||..+.++|+++|||+|++. .+....
T Consensus 58 ~d~lisf~s~gfpl~kai~y~~lr~p~~I-Nd~~~q~~~~DK~~~~~iL~~~gIPtP~t~--~~~rd~~~~~~~~~~e~~ 134 (330)
T 3t7a_A 58 CDCLISFHSKGFPLDKAVAYAKLRNPFVI-NDLNMQYLIQDRREVYSILQAEGILLPRYA--ILNRDPNNPKECNLIEGE 134 (330)
T ss_dssp CSEEEECCCTTCCHHHHHHHHHHHCCEES-BCSTHHHHHTBHHHHHHHHHHTTCCCCCEE--EECCBTTBGGGSSEEECS
T ss_pred CCEEEEeccCCCcHHHHHHHHHHhCCcee-CCHHHHHHHHHHHHHHHHHHHcCCCCCCEE--EEeCCCCCccccceeccc
Confidence 45566554311112255677777777666 899999999999999999999999999975 333211
Q ss_pred HHHH-HHHHhCCcEEEEeccCC-----------CCcee----EEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccC-
Q psy10619 114 HCVE-IARDIGYPVMIKASAGG-----------GGKGM----RIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKN- 176 (246)
Q Consensus 114 ~~~~-~~~~~~~P~vvKp~~g~-----------g~~gv----~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~- 176 (246)
+..+ ....+++|+|+||.+|. .|.|. .++.|.+.....-... ..+..+|+||||+.
T Consensus 135 d~i~~~g~~l~kPfVeKPv~Gsdhni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~~v-------r~~~~~i~QEFI~~~ 207 (330)
T 3t7a_A 135 DHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNV-------RKTGSYIYEEFMPTD 207 (330)
T ss_dssp SEEEETTEEEESSEEEEESBTTCCCCEEECCGGGTCCEEEEEEEETTEEEEEESCCSC-------CSSSCEEEEECCCCS
T ss_pred hhhhhccccccCCeeEcccccccCcceeecccccCCchhhhhhhhCCcccccChhhhh-------ccCCcEEEEeccCCC
Confidence 1111 12356799999999985 22233 3344433210000000 11467999999974
Q ss_pred cceEEEEeeecceeecc
Q psy10619 177 PRHIEIQGTTYKFLIQT 193 (246)
Q Consensus 177 g~e~~v~v~~d~~~v~~ 193 (246)
|+++.+-++++..-..+
T Consensus 208 G~DIRv~vVG~~vv~Am 224 (330)
T 3t7a_A 208 GTDVKVYTVGPDYAHAE 224 (330)
T ss_dssp SEEEEEEEESTTCEEEE
T ss_pred CceEEEEEECCEEEEEE
Confidence 89999999988765433
No 73
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=98.20 E-value=1.6e-06 Score=74.34 Aligned_cols=105 Identities=9% Similarity=-0.134 Sum_probs=74.3
Q ss_pred CHHHHHHHHHHhCC---C-CCCCCcccc---CCHHHHHHHHHHhC-CcEEEEeccCCCC----ceeEEeCCHHHHHHHHH
Q psy10619 86 DKLESKKLAKEAGV---N-IIPGFNGII---RDADHCVEIARDIG-YPVMIKASAGGGG----KGMRIANNDQEAIEGFK 153 (246)
Q Consensus 86 dK~~~~~~l~~~gi---p-~p~~~~~~~---~~~~~~~~~~~~~~-~P~vvKp~~g~g~----~gv~~v~~~~el~~~~~ 153 (246)
-.+..|++|.++++ | +.+..+..+ ++.+++.+.++.+| ||+|+|+....|+ .||.+..|.+|+.+++.
T Consensus 7 ~Ey~~K~ll~~~~~~~~~~~~~~~~~~~~~~~~~~eA~~~a~~lg~~pvVvKaqv~~ggRgk~GGV~l~~s~eev~~aa~ 86 (425)
T 3mwd_A 7 SEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLK 86 (425)
T ss_dssp CHHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCGGGGTSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHHT
T ss_pred hHHHHHHHHHHhccccCCccCCcceEEeCCCCCHHHHHHHHHHhCCCCEEEEeccccCCCCcCCeEEEECCHHHHHHHHH
Confidence 35678999999999 4 222111133 45688888888998 9999999764332 37888899999999988
Q ss_pred HHHHHHHhh----cCCCceEEEecccC--cceEEEEeeeccee
Q psy10619 154 LSSQEAAAS----FGDDRILVEKFIKN--PRHIEIQGTTYKFL 190 (246)
Q Consensus 154 ~~~~~~~~~----~~~~~~lve~~i~~--g~e~~v~v~~d~~~ 190 (246)
+++...... ..-..++||++++. ++|+.+.+..|..+
T Consensus 87 ~ml~~~~~~~~~~~~v~~vlVe~~~~~~~~~E~ylgi~~Dr~g 129 (425)
T 3mwd_A 87 PRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREG 129 (425)
T ss_dssp TTTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTE
T ss_pred HHHhhhhhccCCCceEEEEEEEecccCCCCceEEEEEEecCCC
Confidence 876422100 00246999999974 58999999988754
No 74
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=97.97 E-value=6e-06 Score=76.01 Aligned_cols=103 Identities=9% Similarity=-0.100 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHhCCC------CCCCCccccC---CHHHHHHHHHHhC-CcEEEEeccCCCCc----eeEEeCCHHHHHHH
Q psy10619 86 DKLESKKLAKEAGVN------IIPGFNGIIR---DADHCVEIARDIG-YPVMIKASAGGGGK----GMRIANNDQEAIEG 151 (246)
Q Consensus 86 dK~~~~~~l~~~gip------~p~~~~~~~~---~~~~~~~~~~~~~-~P~vvKp~~g~g~~----gv~~v~~~~el~~~ 151 (246)
-.+..|++|.++++| .+++. .++ +.+++.++++.++ +|+|+|+....|+| ||.+..|.+|+.++
T Consensus 7 ~Ey~aK~ll~~~~~~~~~~~~~~~~~--~v~~~~~~~eA~~aa~~lg~~pvVvKaQv~~GgRGKaGGVkL~~s~eEa~~a 84 (829)
T 3pff_A 7 SEQTGKELLYKFICTTSAIQNRFKYA--RVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSW 84 (829)
T ss_dssp CHHHHHHHHHHHCCCSSCBCSTTCCE--EECTTCCHHHHHHHCTHHHHSCEEEEECSSCSCTTTTTCCEEEECHHHHHHH
T ss_pred hHHHHHHHHHHhCccccccccCCceE--EeCCCCCHHHHHHHHHHhCCCCEEEEecccccCCCcCCeEEEECCHHHHHHH
Confidence 357789999999998 33432 344 4577777777887 99999998765554 78888999999999
Q ss_pred HHHHHHHHHhh----cCCCceEEEecccC--cceEEEEeeeccee
Q psy10619 152 FKLSSQEAAAS----FGDDRILVEKFIKN--PRHIEIQGTTYKFL 190 (246)
Q Consensus 152 ~~~~~~~~~~~----~~~~~~lve~~i~~--g~e~~v~v~~d~~~ 190 (246)
+.+++...... ..-..++||++++. ++||.+.+..|..+
T Consensus 85 a~~iLg~~~~~~~p~~~V~gvLVE~m~~~~~~~ElYvgI~~Dr~g 129 (829)
T 3pff_A 85 LKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREG 129 (829)
T ss_dssp HTTTTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTE
T ss_pred HHHHHHHHHhhcCCCceEEEEEEEecccCCCccEEEEEEEecCCC
Confidence 88876432110 00146899999974 58999999998754
No 75
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=97.64 E-value=9.1e-05 Score=67.54 Aligned_cols=44 Identities=43% Similarity=0.854 Sum_probs=36.5
Q ss_pred hcCCCCCCCCcccceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 201 KLLPPKPKLDETKILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 201 ~~~~~~~~~~~~~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..++.....+....++|||||.+.++.++.||.|++||+|++||
T Consensus 601 ~~~~~~~~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iE 644 (681)
T 3n6r_A 601 RLMPEKLPPDTSKMLLCPMPGLIVKVDVEVGQEVQEGQALCTIE 644 (681)
T ss_dssp TTSCCCCCCCCCSEEECCSCEEEEEECCCTTCEECTTCEEEEEE
T ss_pred cccccccCCCCCCeEECCCcEEEEEEEeCCCCEEcCCCEEEEEE
Confidence 34444333445577999999999999999999999999999998
No 76
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=97.53 E-value=6.4e-05 Score=49.44 Aligned_cols=32 Identities=16% Similarity=0.367 Sum_probs=28.6
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+.+|++|.+.++.++.||.|++||.|++||
T Consensus 6 ~~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie 37 (84)
T 2kcc_A 6 TVLRSPSAGKLTQYTVEDGGHVEAGSSYAEME 37 (84)
T ss_dssp TEECCSSSCCEEEESSCTTEEECTTCEEEEEE
T ss_pred ceEECCCCEEEEEEECCCCCEECCCCEEEEEE
Confidence 45889999999999999999999999999988
No 77
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=97.44 E-value=0.00011 Score=46.53 Aligned_cols=30 Identities=37% Similarity=0.574 Sum_probs=24.7
Q ss_pred eeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 215 LHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 215 l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
+.+|++|.+.++.++.||.|++||.|+.||
T Consensus 2 v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~ 31 (72)
T 1z6h_A 2 VSIQMAGNLWKVHVKAGDQIEKGQEVAILE 31 (72)
T ss_dssp EECCSSEEEEEECCCTTCEECTTCEEEEEE
T ss_pred EECcccEEEEEEEcCCcCEECCCCEEEEEE
Confidence 577888888888888888888888888876
No 78
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.38 E-value=0.00015 Score=49.26 Aligned_cols=32 Identities=16% Similarity=0.367 Sum_probs=28.1
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+.+|++|.+.++.++.||.|++||.|+.||
T Consensus 18 ~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le 49 (100)
T 2dn8_A 18 TVLRSPSAGKLTQYTVEDGGHVEAGSSYAEME 49 (100)
T ss_dssp TEEECSSCEEEEEESSCTTEEECTTCEEEEEE
T ss_pred cEEeCCCCEEEEEEEcCCcCEECCCCEEEEEE
Confidence 45889999999999999999999999999887
No 79
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=97.29 E-value=0.00024 Score=45.23 Aligned_cols=31 Identities=45% Similarity=0.714 Sum_probs=22.6
Q ss_pred ceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 214 ILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 214 ~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
.+.+|++|.+.++.++.||.|++||.|+.||
T Consensus 7 ~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~ 37 (74)
T 2d5d_A 7 VVSAPMPGKVLRVLVRVGDRVRVGQGLLVLE 37 (74)
T ss_dssp EEECSSCEEEEEECCCTTCEECTTCEEEEEE
T ss_pred EEecCCCEEEEEEEcCCCCEeCCCCEEEEEe
Confidence 4667777777777777777777777777766
No 80
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=97.25 E-value=0.00016 Score=48.59 Aligned_cols=32 Identities=50% Similarity=0.992 Sum_probs=28.3
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+.+|++|.+.++.++.||.|++||.|+.||
T Consensus 26 ~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie 57 (94)
T 2jku_A 26 SVLRSPMPGVVVAVSVKPGDAVAEGQEICVIE 57 (94)
T ss_dssp CCCCCSSSCEEEEECCCTTCCCCTTCCCEEEE
T ss_pred eEEECCCCEEEEEEECCCCCEEcCCCEEEEEe
Confidence 45889999999999999999999999999887
No 81
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=97.20 E-value=0.00023 Score=46.17 Aligned_cols=32 Identities=31% Similarity=0.608 Sum_probs=30.0
Q ss_pred cceeccccceeeee-------eecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSV-------NCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l-------~~~~G~~v~~g~~~~v~e 244 (246)
..+.+|++|.+.++ .++.||.|++||.|+.||
T Consensus 5 ~~v~a~~~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie 43 (80)
T 1bdo_A 5 HIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVE 43 (80)
T ss_dssp EEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEE
T ss_pred eEEEcCCCeEEEEecccCcccccCCcCEECCCCEEEEEE
Confidence 35899999999999 899999999999999998
No 82
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=97.18 E-value=0.00045 Score=44.32 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=22.7
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+.+++.|.+.++.++.||.|++||.|+.||
T Consensus 9 ~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~ 40 (77)
T 1dcz_A 9 GEIPAPLAGTVSKILVKEGDTVKAGQTVLVLE 40 (77)
T ss_dssp SEEEBSSSCEEEEECCCTTCEECTTSEEEEEE
T ss_pred eEEECCCCEEEEEEEcCCcCEEcCCCEEEEEE
Confidence 34677777777777777777777777777766
No 83
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=97.10 E-value=0.00051 Score=66.04 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.3
Q ss_pred CcccceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 210 DETKILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 210 ~~~~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
.....+.|||+|.+.++.++.||.|++||+|++||
T Consensus 1075 ~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~ie 1109 (1150)
T 3hbl_A 1075 SNPSHIGAQMPGSVTEVKVSVGETVKANQPLLITE 1109 (1150)
T ss_dssp TCSSEEECSSSEEEEEECCCTTCEECTTCEEEEEE
T ss_pred CCCceeecCceEEEEEEEeCCCCEECCCCEEEEEE
Confidence 34467999999999999999999999999999998
No 84
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=97.10 E-value=0.0004 Score=47.09 Aligned_cols=32 Identities=34% Similarity=0.456 Sum_probs=27.8
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+.++++|.+.++.++.||.|++||.|+.||
T Consensus 15 ~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie 46 (99)
T 2ejm_A 15 GGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMI 46 (99)
T ss_dssp SSCBCSSSEEEEEECCCTTEEECSSCEEEEEE
T ss_pred eEEecCCCEEEEEEECCCCCEECCCCEEEEEE
Confidence 45888899999999999999999999998887
No 85
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=96.86 E-value=0.0011 Score=60.56 Aligned_cols=34 Identities=35% Similarity=0.671 Sum_probs=31.8
Q ss_pred cccceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 211 ETKILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 211 ~~~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
....+.+||+|.+.++.++.||.|++||+|++||
T Consensus 648 ~~~~v~ap~~G~V~~v~V~~Gd~V~~Gq~L~~iE 681 (718)
T 3bg3_A 648 VKGQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLS 681 (718)
T ss_dssp SSSCEECSSCEEEEEECSCTTCCBCTTCCCEEEE
T ss_pred CCceEeCCCCeEEEEEEeCCCCeeCCCCEEEEEe
Confidence 3457999999999999999999999999999998
No 86
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=96.76 E-value=0.00085 Score=43.30 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=24.8
Q ss_pred eccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 216 HAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 216 ~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
.++++|.+.++.++.||.|++||.|+.||
T Consensus 11 ~~~~~G~i~~~~v~~Gd~V~~G~~l~~ie 39 (79)
T 1ghj_A 11 ESIADGTVATWHKKPGEAVKRDELIVDIE 39 (79)
T ss_dssp SSCSCEEECCCSSCTTSEECSSCEEEEEE
T ss_pred CCCCCEEEEEEEcCCCCEECCCCEEEEEE
Confidence 35678889999999999999999999887
No 87
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=96.71 E-value=0.0017 Score=62.59 Aligned_cols=34 Identities=26% Similarity=0.502 Sum_probs=28.8
Q ss_pred cccceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 211 ETKILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 211 ~~~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
....+.+||+|.+.++.++.||.|++||+|++||
T Consensus 1094 ~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~iE 1127 (1165)
T 2qf7_A 1094 NAAHVGAPMPGVISRVFVSSGQAVNAGDVLVSIE 1127 (1165)
T ss_dssp CTTEEECSSCEEEEEECCSSCCCC---CEEEEEE
T ss_pred CCceeeCCCCeEEEEEEcCCcCEeCCCCEEEEEE
Confidence 3467999999999999999999999999999998
No 88
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=96.71 E-value=0.00068 Score=43.54 Aligned_cols=29 Identities=24% Similarity=0.278 Sum_probs=23.9
Q ss_pred eccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 216 HAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 216 ~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
.++++|.+.++.++.||.|++||.|+.||
T Consensus 11 ~~~~~G~v~~~~v~~G~~V~~G~~l~~ie 39 (77)
T 2l5t_A 11 EGVTEGEIVRWDVKEGDMVEKDQDLVEVM 39 (77)
T ss_dssp SSCCCEEEEECSCCTTCEECSCCCCCEEE
T ss_pred CCCccEEEEEEEeCCCCEECCCCEEEEEE
Confidence 45678888888888888888888888887
No 89
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=96.69 E-value=0.00093 Score=43.33 Aligned_cols=28 Identities=21% Similarity=0.208 Sum_probs=21.4
Q ss_pred ccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 217 APMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 217 sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
++++|.+.++.++.||.|++||.|++||
T Consensus 12 ~~~~G~i~~~~v~~Gd~V~~G~~l~~ie 39 (81)
T 1gjx_A 12 GHENVDIIAVEVNVGDTIAVDDTLITLE 39 (81)
T ss_dssp SCSSEEEEEECCCSSCBCCSSCCCEEEE
T ss_pred CCCcEEEEEEEcCCCCEECCCCEEEEEE
Confidence 4677777777777777777777777776
No 90
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=96.64 E-value=0.0013 Score=43.26 Aligned_cols=28 Identities=29% Similarity=0.390 Sum_probs=24.5
Q ss_pred ccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 217 APMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 217 sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
+..+|.+.++.++.||.|++||.|++||
T Consensus 16 ~~~~G~v~~~~v~~Gd~V~~G~~l~~ie 43 (87)
T 3crk_C 16 TMTMGTVQRWEKKVGEKLSEGDLLAEIE 43 (87)
T ss_dssp TCCEEEEEEECSCTTCEECTTCEEEEEE
T ss_pred CCCcEEEEEEEcCCCCEEcCCCEEEEEE
Confidence 3567889999999999999999999988
No 91
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=96.58 E-value=0.00037 Score=63.48 Aligned_cols=34 Identities=29% Similarity=0.401 Sum_probs=0.0
Q ss_pred cccceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 211 ETKILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 211 ~~~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
....++|||||.+.++.++.||.|++||+|++||
T Consensus 601 ~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iE 634 (675)
T 3u9t_A 601 HQGGLSAPMNGSIVRVLVEPGQTVEAGATLVVLE 634 (675)
T ss_dssp ----------------------------------
T ss_pred CCCeEECCCCEEEEEEEeCCCCEEcCCCEEEEEE
Confidence 3467999999999999999999999999999998
No 92
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=96.41 E-value=0.0019 Score=43.10 Aligned_cols=27 Identities=26% Similarity=0.250 Sum_probs=21.9
Q ss_pred cccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 218 PMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 218 p~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+|.+.++.++.||.|++||.|++||
T Consensus 16 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie 42 (93)
T 1k8m_A 16 IREVTVKEWYVKEGDTVSQFDSICEVQ 42 (93)
T ss_dssp SCCEEEEEECCCTTCEECSSSCCEEEE
T ss_pred CCCEEEEEEEcCCcCEECCCCEEEEEE
Confidence 457888888888888888888888887
No 93
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=96.39 E-value=0.0024 Score=61.81 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=30.9
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+.|||+|.+.++.++.||.|++||+|++||
T Consensus 1168 ~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iE 1199 (1236)
T 3va7_A 1168 ELLYSEYTGRFWKPVAAVGDHVEAGDGVIIIE 1199 (1236)
T ss_dssp EEEECSSCEEEEEESSCTTCEECSSCEEEEEE
T ss_pred cEEeCCCcEEEEEEEcCCCCEECCCCEEEEEE
Confidence 56999999999999999999999999999998
No 94
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=96.37 E-value=0.0033 Score=40.53 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=30.1
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..++||..|.+.++.++.|+.|..||.|+.||
T Consensus 49 ~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 49 NQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp EEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred EEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 46999999999999999999999999999986
No 95
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.34 E-value=0.0024 Score=43.04 Aligned_cols=27 Identities=22% Similarity=0.338 Sum_probs=24.3
Q ss_pred cccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 218 PMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 218 p~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+|.+.++.++.||.|++||.|++||
T Consensus 19 ~~~G~i~~~~v~~Gd~V~~G~~L~~ie 45 (98)
T 2dnc_A 19 MEEGNIVKWLKKEGEAVSAGDALCEIE 45 (98)
T ss_dssp CSEECEEEESSCTTCEECTTSEEEEEE
T ss_pred CccEEEEEEEcCCCCEeCCCCEEEEEE
Confidence 367889999999999999999999998
No 96
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=96.26 E-value=0.0027 Score=43.64 Aligned_cols=27 Identities=30% Similarity=0.352 Sum_probs=24.0
Q ss_pred cccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 218 PMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 218 p~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
...|.+.++.++.||.|++||.|++||
T Consensus 19 ~~~G~v~~~~v~~Gd~V~~G~~L~~iE 45 (108)
T 2dne_A 19 MQAGTIARWEKKEGDKINEGDLIAEVE 45 (108)
T ss_dssp CCEEEEEECSSCTTCEECTTSEEEEEE
T ss_pred cccEEEEEEEcCCCCEecCCCEEEEEE
Confidence 457889999999999999999999998
No 97
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=96.23 E-value=0.00076 Score=44.26 Aligned_cols=31 Identities=29% Similarity=0.598 Sum_probs=23.3
Q ss_pred eeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 215 LHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 215 l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
+++|..|.+.++.++.|+.|..|++|+.|+.
T Consensus 42 i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~ 72 (85)
T 2k7v_A 42 VPAPFAGVVKELKVNVGDKVKTGSLIMIFEV 72 (85)
T ss_dssp EECSSCBCCCEECSCTTCCBCTTSEEEEEEC
T ss_pred EECCCCEEEEEEEeCCCCEECCCCEEEEEEc
Confidence 5677777777777777777777777777763
No 98
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=96.20 E-value=0.0043 Score=39.64 Aligned_cols=32 Identities=16% Similarity=0.308 Sum_probs=30.1
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..++||..|.+.++.++.|+.|..|++|+.|+
T Consensus 45 ~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 45 VKIPSPVRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp EECCCCCCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred EEEECCCCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 46999999999999999999999999999986
No 99
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=96.16 E-value=0.0039 Score=40.18 Aligned_cols=34 Identities=26% Similarity=0.520 Sum_probs=31.2
Q ss_pred ccceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 212 TKILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 212 ~~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
...++||..|.+.++.++.|+.|..||+|+.|+.
T Consensus 43 ~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~ 76 (80)
T 1qjo_A 43 SMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEV 76 (80)
T ss_dssp CEEEEBSSCEEEEECCCCTTCEECTTCCCEEEES
T ss_pred eEEEeCCCCEEEEEEecCCCCEECCCCEEEEEEc
Confidence 3569999999999999999999999999999974
No 100
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=96.16 E-value=0.0051 Score=38.63 Aligned_cols=34 Identities=32% Similarity=0.371 Sum_probs=30.8
Q ss_pred ccceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 212 TKILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 212 ~~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
...+++|..|.+.++.++.|+.|+.||+|+.|+-
T Consensus 36 ~~~i~ap~~G~v~~~~v~~G~~V~~G~~l~~i~~ 69 (72)
T 1z6h_A 36 EIPIVADRSGIVKEVKKKEGDFVNEGDVLLELSN 69 (72)
T ss_dssp EEEEECSSCEEEEEESSCTTCEECTTCEEEEEGG
T ss_pred EEEEECCCCcEEEEEecCCCCEECCCCEEEEEeC
Confidence 3469999999999999999999999999998863
No 101
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=96.12 E-value=0.0098 Score=50.04 Aligned_cols=56 Identities=20% Similarity=0.315 Sum_probs=39.4
Q ss_pred CCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEeccc-------Ccc--eEEEEeeec
Q psy10619 123 GYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIK-------NPR--HIEIQGTTY 187 (246)
Q Consensus 123 ~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~-------~g~--e~~v~v~~d 187 (246)
+.++|+||..++.|+|+.++++.+++.+.++.. ...++||+||+ +|+ ++++-++..
T Consensus 147 ~~~wI~KP~~~srG~GI~l~~~~~~i~~~~~~~---------~~~~VvQkYI~~PlLi~~~grKFDlR~Yvlvt 211 (380)
T 3tig_A 147 GNVWIAKSSSGAKGEGILISSDATELLDFIDNQ---------GQVHVIQKYLESPLLLEPGHRKFDIRSWVLVD 211 (380)
T ss_dssp CCCEEEEESCC----CCBCCSCSHHHHHHHHHH---------TSCEEEEECCSSBCCBTTTTBCEEEEEEEEEC
T ss_pred CCeEEEeCCccCCCCCEEEeCCHHHHHHHHhcc---------CCcEEEEecccCceeecCCCceeEEEEEEEEc
Confidence 578999999999999999999999987766431 35799999996 344 555555543
No 102
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=96.10 E-value=0.0066 Score=38.98 Aligned_cols=33 Identities=33% Similarity=0.568 Sum_probs=30.8
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+++|..|.+.++.++.|+.|..|++|+.|+.
T Consensus 42 ~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~ 74 (79)
T 1iyu_A 42 MEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEP 74 (79)
T ss_dssp EEEECSSSSEEEEESCCTTCEEETTSEEEEEEC
T ss_pred EEEECCCCEEEEEEEeCCCCEECCCCEEEEEec
Confidence 469999999999999999999999999999874
No 103
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=96.00 E-value=0.0014 Score=42.33 Aligned_cols=27 Identities=19% Similarity=0.227 Sum_probs=22.1
Q ss_pred cccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 218 PMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 218 p~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+|.+.++.++.||.|++||.|++||
T Consensus 14 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie 40 (80)
T 1pmr_A 14 VADATVATWHKKPGDAVVRDEVLVEIE 40 (80)
T ss_dssp CSCEECCBCCCCTTCCBSSSCCBCBCC
T ss_pred CccEEEEEEECCCcCEECCCCEEEEEE
Confidence 467888888888888888888888877
No 104
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=96.00 E-value=0.0072 Score=38.79 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=30.9
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+++|..|.+.++.++.|+.|..|++|+.|+.
T Consensus 45 ~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 45 MEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp EEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred EEEEcCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 569999999999999999999999999999975
No 105
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=95.90 E-value=0.0055 Score=39.43 Aligned_cols=26 Identities=35% Similarity=0.343 Sum_probs=24.7
Q ss_pred cceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 220 PGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 220 pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
+|.+.++.++.||.|++||.|++||-
T Consensus 14 ~G~v~~~~v~~G~~V~~G~~l~~ie~ 39 (80)
T 1qjo_A 14 EVEVTEVMVKVGDKVAAEQSLITVEG 39 (80)
T ss_dssp CEEEEECCCCTTCEECBTSEEEEEES
T ss_pred CEEEEEEEcCCCCEECCCCEEEEEEc
Confidence 89999999999999999999999983
No 106
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=95.87 E-value=0.0071 Score=38.53 Aligned_cols=33 Identities=33% Similarity=0.457 Sum_probs=30.6
Q ss_pred ccceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 212 TKILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 212 ~~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
...+++|..|.+.++.++.|+.|..|++|+.||
T Consensus 45 ~~~i~Ap~~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 45 ETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp EEEEECSSSEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred eEEEECCCCEEEEEEecCCcCEECCCCEEEEEC
Confidence 356999999999999999999999999999987
No 107
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=95.81 E-value=0.0071 Score=39.47 Aligned_cols=31 Identities=32% Similarity=0.348 Sum_probs=27.8
Q ss_pred eeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 215 LHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 215 l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
++.|..|.+.++.++.||.|++||.|++||-
T Consensus 5 i~~p~~G~v~~~~v~~Gd~V~~G~~L~~ie~ 35 (85)
T 2k7v_A 5 VNVPDIVEVTEVMVKVGDKVAAEQSLITVEG 35 (85)
T ss_dssp CCCCSCCCCCSCCCSSSCCCCCSSSCCCCSC
T ss_pred EECCCeEEEEEEEcCCCCEEcCCCEEEEEEc
Confidence 5667779999999999999999999999983
No 108
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=95.75 E-value=0.0068 Score=42.92 Aligned_cols=26 Identities=31% Similarity=0.443 Sum_probs=20.9
Q ss_pred ccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 219 MPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 219 ~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..|.|.++.++.||.|++||.|++||
T Consensus 40 ~~G~V~~~~V~~Gd~V~~Gd~L~~iE 65 (128)
T 1y8o_B 40 TMGTVQRWEKKVGEKLSEGDLLAEIE 65 (128)
T ss_dssp SEEEEEEECSCTTCEECTTCEEEEEE
T ss_pred ccEEEEEEecCCCCEecCCCEEEEEE
Confidence 45778888888888888888888887
No 109
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=95.73 E-value=0.011 Score=37.28 Aligned_cols=32 Identities=31% Similarity=0.517 Sum_probs=30.0
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+++|..|.+.++.++.|+.|..|+.|+.||
T Consensus 43 ~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 43 NEIPSPRDGVVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp EEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred EEEeCCCCEEEEEEEcCCcCEECCCCEEEEEC
Confidence 46999999999999999999999999999986
No 110
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=95.62 E-value=0.011 Score=39.32 Aligned_cols=33 Identities=15% Similarity=0.283 Sum_probs=30.8
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+++|..|.+.++.++.|+.|..||+|+.|+.
T Consensus 48 ~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~ 80 (93)
T 1k8m_A 48 VTITSRYDGVIKKLYYNLDDIAYVGKPLVDIET 80 (93)
T ss_dssp EECCCSSCEEEEEECCCSSCEECTTSEEEEEEC
T ss_pred EEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEec
Confidence 568999999999999999999999999999974
No 111
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=95.50 E-value=0.013 Score=38.31 Aligned_cols=33 Identities=15% Similarity=0.304 Sum_probs=30.8
Q ss_pred cceeccccceeeeeeecCCC-eeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGD-QIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~-~v~~g~~~~v~e~ 245 (246)
..+++|..|.+.++.++.|+ .|..||+|+.|+.
T Consensus 49 ~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~ 82 (87)
T 3crk_C 49 IGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVE 82 (87)
T ss_dssp EEEECCSCEEEEEESSCTTCCCEETTCEEEEEES
T ss_pred ceeecCcCcEEEEEEECCCCeEECCCCEEEEEEc
Confidence 56999999999999999999 8999999999975
No 112
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=95.35 E-value=0.0077 Score=43.05 Aligned_cols=31 Identities=19% Similarity=0.275 Sum_probs=27.3
Q ss_pred eeccccceeeeeee-cCCCeeeCCCeEEEEcc
Q psy10619 215 LHAPMPGLVKSVNC-KVGDQIMEGQELCVVGK 245 (246)
Q Consensus 215 l~sp~pg~i~~l~~-~~G~~v~~g~~~~v~e~ 245 (246)
..+|++|.+..+.+ ++||.|++||++++||-
T Consensus 39 ~a~~~lG~i~~V~lp~vGd~V~~Gd~l~~VEs 70 (136)
T 1zko_A 39 HAQEQLGDVVYVDLPEVGREVKKGEVVASIES 70 (136)
T ss_dssp HHHHHHCSEEEEECCCTTCEECTTCEEEEEEE
T ss_pred hhcccCCCcEEEEecCCCCEEeCCCEEEEEEE
Confidence 45688888888888 99999999999999993
No 113
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=94.98 E-value=0.031 Score=48.35 Aligned_cols=105 Identities=16% Similarity=0.216 Sum_probs=65.6
Q ss_pred HHHHHHHHcCCeEeCCCHHHHHHhcCHHHH-------HHHHHH-hCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEecc
Q psy10619 61 SFVSRLKEEGVVFIGPTAECIRGMGDKLES-------KKLAKE-AGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASA 132 (246)
Q Consensus 61 ~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~-------~~~l~~-~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~ 132 (246)
.+.+..++-++.+..+. .+ .++.||..+ +.++.+ .=++..+++ .+.+.++.....+.+. -+|+||..
T Consensus 297 gLl~A~r~G~V~i~Na~-gs-gv~~dKal~a~Lp~l~~~~lgEe~il~~VpT~--~c~~~~~~~~vl~~l~-~lViKp~~ 371 (474)
T 3n6x_A 297 GLLSVYRNGGVTLANAV-GT-GVADDKDTYIYVPEMIRFYLGEEPILSNVPTY--QLSKADDLKYVLDNLA-ELVVKEVQ 371 (474)
T ss_dssp THHHHHHTTSCEEESCT-TT-HHHHSTTTGGGHHHHHHHHHCSCCSSEECCCE--ETTSHHHHHHHHHSGG-GEEEEECC
T ss_pred HHHHHHHcCCEEEeCCC-ch-hhhcCcHHHHHhHHHHHHhCCHhhhccCCCce--ecCCHHHHHHHHhchh-heEEEecC
Confidence 56777777788877443 33 256677632 222222 223445544 4677777777776665 79999999
Q ss_pred CCCCceeEEe--CCHHHHHHHHHHHHHHHHhhcCCCceEEEecccC
Q psy10619 133 GGGGKGMRIA--NNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKN 176 (246)
Q Consensus 133 g~g~~gv~~v--~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~ 176 (246)
+.||.|+.+- -+.++.++..+++.. ....+++|++++-
T Consensus 372 g~gg~gv~iG~~~s~~e~~~~~~~i~~------~p~~yIaQe~v~l 411 (474)
T 3n6x_A 372 GSGGYGMLVGPAASKQELEDFRQRILA------NPANYIAQPTLAL 411 (474)
T ss_dssp CE-----EEGGGCCHHHHHHHHHHHHH------SGGGEEEEECCCC
T ss_pred CCCCCceEECCcCCHHHHHHHHHHHHh------CCCCEEEeeccCC
Confidence 9999999873 577888777776654 1346999999984
No 114
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=94.93 E-value=0.012 Score=37.94 Aligned_cols=33 Identities=42% Similarity=0.561 Sum_probs=30.7
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+++|..|.+.+++++.|+.|..|+.|+.|+.
T Consensus 45 ~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (81)
T 1gjx_A 45 MDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEA 77 (81)
T ss_dssp EEECCCCSSBBCCCCCCSSCEECSSSCCCEECC
T ss_pred EEEECCCCEEEEEEecCCCCEeCCCCEEEEEEe
Confidence 569999999999999999999999999999874
No 115
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=94.83 E-value=0.011 Score=37.97 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=30.5
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+++|..|.+.++.++.|+.|..||+|+.|+-
T Consensus 46 ~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 46 LEVPASADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CCCBCCSBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred EEEECCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 568999999999999999999999999998863
No 116
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=94.74 E-value=0.02 Score=36.64 Aligned_cols=25 Identities=32% Similarity=0.248 Sum_probs=23.1
Q ss_pred cceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 220 PGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 220 pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
. .+.++.++.||.|++||.|+.||-
T Consensus 13 ~-~i~~~~v~~Gd~V~~G~~l~~le~ 37 (79)
T 1iyu_A 13 G-EVIELLVKTGDLIEVEQGLVVLES 37 (79)
T ss_dssp E-EEEEECCCTTCBCCSSSEEEEEEC
T ss_pred C-EEEEEecCCCCEEcCCCEEEEEEc
Confidence 5 899999999999999999999983
No 117
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.67 E-value=0.026 Score=37.85 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=31.2
Q ss_pred ccceeccccceeeeeeecCCCee-eCCCeEEEEcc
Q psy10619 212 TKILHAPMPGLVKSVNCKVGDQI-MEGQELCVVGK 245 (246)
Q Consensus 212 ~~~l~sp~pg~i~~l~~~~G~~v-~~g~~~~v~e~ 245 (246)
...+++|..|.+.++.++.|+.| ..||+|+.|+.
T Consensus 50 ~~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~~ 84 (98)
T 2dnc_A 50 VVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVE 84 (98)
T ss_dssp EEEEECSSCEEEEECSSCTTCCCEESSCEEEEEEC
T ss_pred eeEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEec
Confidence 35699999999999999999999 99999999975
No 118
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=94.60 E-value=0.03 Score=38.29 Aligned_cols=34 Identities=12% Similarity=0.142 Sum_probs=31.1
Q ss_pred ccceeccccceeeeeeecCCC-eeeCCCeEEEEcc
Q psy10619 212 TKILHAPMPGLVKSVNCKVGD-QIMEGQELCVVGK 245 (246)
Q Consensus 212 ~~~l~sp~pg~i~~l~~~~G~-~v~~g~~~~v~e~ 245 (246)
...+++|..|.+.++.++.|+ .|..||.|++|+.
T Consensus 50 ~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i~~ 84 (108)
T 2dne_A 50 TVGFESLEECYMAKILVAEGTRDVPIGAIICITVG 84 (108)
T ss_dssp EEEEECSSSEEEEECSSCTTCCSEETTCEEEEEES
T ss_pred eeEEeCCCCEEEEEEEeCCCCeeecCCCEEEEEec
Confidence 356999999999999999999 8999999999975
No 119
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=94.60 E-value=0.031 Score=39.46 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=31.1
Q ss_pred ccceeccccceeeeeeecCCC-eeeCCCeEEEEcc
Q psy10619 212 TKILHAPMPGLVKSVNCKVGD-QIMEGQELCVVGK 245 (246)
Q Consensus 212 ~~~l~sp~pg~i~~l~~~~G~-~v~~g~~~~v~e~ 245 (246)
...+.+|..|.+.++.++.|| .|..||.|++|+.
T Consensus 70 ~~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~i~~ 104 (128)
T 1y8o_B 70 TIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVE 104 (128)
T ss_dssp EEEEECCSCEEEEEESSCTTCCSEETTCEEEEEES
T ss_pred eeEEeCCCCeEEEEEEeCCCCeeecCCCEEEEEec
Confidence 356899999999999999998 8999999999975
No 120
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=94.52 E-value=0.022 Score=36.98 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=30.2
Q ss_pred ccceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 212 TKILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 212 ~~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
...++||..|.+.++. +.|+.|..|+.|+.|+.
T Consensus 42 ~~~i~Ap~~G~v~~~~-~~G~~V~~G~~l~~i~~ 74 (84)
T 2kcc_A 42 IMTLNVQERGRVKYIK-RPGAVLEAGCVVARLEL 74 (84)
T ss_dssp EEEEECSSSEEEEECS-CTTCCCCTTCCCEEEEC
T ss_pred eEEEECCCCEEEEEEc-CCCCEECCCCEEEEEeC
Confidence 3569999999999999 99999999999999975
No 121
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=94.49 E-value=0.0066 Score=40.52 Aligned_cols=32 Identities=38% Similarity=0.575 Sum_probs=0.0
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..++||..|.+.++.++.|+.|..|++|+.||
T Consensus 63 ~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~ie 94 (94)
T 2jku_A 63 NSMTAGKTGTVKSVHCQAGDTVGEGDLLVELE 94 (94)
T ss_dssp --------------------------------
T ss_pred EEEECCCCEEEEEEcCCCcCEECCCCEEEEEC
Confidence 45899999999999999999999999999886
No 122
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=94.18 E-value=0.032 Score=46.18 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=30.1
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
-.+.++..|.+.++.++.||.|++||.|+.|+-
T Consensus 32 ~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~ 64 (341)
T 3fpp_A 32 VDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDP 64 (341)
T ss_dssp EECCCSSCEEEEEECCCTTCEECTTCEEEEECC
T ss_pred EEEeccCCcEEEEEEeCCCCEECCCCEEEEECh
Confidence 358889999999999999999999999999863
No 123
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=94.16 E-value=0.024 Score=40.25 Aligned_cols=30 Identities=20% Similarity=0.194 Sum_probs=26.2
Q ss_pred eccccceeeeeee-cCCCeeeCCCeEEEEcc
Q psy10619 216 HAPMPGLVKSVNC-KVGDQIMEGQELCVVGK 245 (246)
Q Consensus 216 ~sp~pg~i~~l~~-~~G~~v~~g~~~~v~e~ 245 (246)
..+++|.+..+.+ ++|+.|++||++++||-
T Consensus 31 a~~~lG~i~~v~lp~~G~~V~~g~~l~~vEs 61 (131)
T 1hpc_A 31 AQDHLGEVVFVELPEPGVSVTKGKGFGAVES 61 (131)
T ss_dssp HHHHHCSEEEEECCCTTCEECBTSEEEEEEE
T ss_pred hcccCCCceEEEecCCCCEEeCCCEEEEEEe
Confidence 4577788888888 99999999999999983
No 124
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=93.89 E-value=0.042 Score=36.87 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=30.6
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+++|..|.+.++.++.|+.|..|+.|+.|+.
T Consensus 52 ~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i~~ 84 (99)
T 2ejm_A 52 HTIKSPKDGTVKKVFYREGAQANRHTPLVEFEE 84 (99)
T ss_dssp EEEECSSCEEEEEESCCTTEEECTTCBCEEECC
T ss_pred EEEECCCCeEEEEEEcCCCCEECCCCEEEEEEC
Confidence 469999999999999999999999999999864
No 125
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=93.75 E-value=0.041 Score=45.87 Aligned_cols=33 Identities=24% Similarity=0.486 Sum_probs=30.5
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+.++..|.|.++.++.||.|++||.|+.|+-
T Consensus 58 ~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~ 90 (359)
T 3lnn_A 58 VKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDS 90 (359)
T ss_dssp EEECCSSCEEEEECCSCTTCEECTTCEEEEEEC
T ss_pred EEEeccCCEEEEEEEcCCCCEEcCCCEEEEECh
Confidence 458999999999999999999999999999974
No 126
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=93.43 E-value=0.045 Score=45.96 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=30.2
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+.++..|.|.++.++.||.|++||.|+.|+-
T Consensus 44 ~~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~ 76 (369)
T 1vf7_A 44 AEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDP 76 (369)
T ss_dssp EEECCSSCEEEEECCSCSSEEECTTSEEEEECC
T ss_pred EEEEeeCceEEEEEEcCCCCEEcCCCEEEEECc
Confidence 358899999999999999999999999999963
No 127
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.43 E-value=0.077 Score=35.59 Aligned_cols=32 Identities=19% Similarity=0.132 Sum_probs=29.6
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+++|..|.+. +.++.|+.|..|++|+.|+.
T Consensus 55 ~~i~Ap~~G~V~-~~v~~G~~V~~G~~l~~i~~ 86 (100)
T 2dn8_A 55 MTLNVQERGRVK-YIKRPGAVLEAGCVVARLEL 86 (100)
T ss_dssp EEEECSSSEEEE-ECSCTTCEECSSCEEEEECC
T ss_pred EEEEcCCCEEEE-EEeCCCCEECCCCEEEEEEc
Confidence 569999999999 99999999999999999874
No 128
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=93.03 E-value=0.049 Score=38.47 Aligned_cols=30 Identities=27% Similarity=0.323 Sum_probs=24.9
Q ss_pred eccccceeeeeee-cCCCeeeCCCeEEEEcc
Q psy10619 216 HAPMPGLVKSVNC-KVGDQIMEGQELCVVGK 245 (246)
Q Consensus 216 ~sp~pg~i~~l~~-~~G~~v~~g~~~~v~e~ 245 (246)
.++++|-+..+.+ ++|+.|++||++++||-
T Consensus 31 a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs 61 (128)
T 1onl_A 31 AQDALGDVVYVELPEVGRVVEKGEAVAVVES 61 (128)
T ss_dssp HHHHHCSEEEEECBCTTCEECTTCEEEEEEE
T ss_pred HhhcCCCceEEEecCCCCEEeCCCEEEEEEE
Confidence 3466777777777 99999999999999983
No 129
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=92.89 E-value=0.047 Score=45.65 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=30.2
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
-.+.++..|.+.++.++.||.|++||.|+.|+-
T Consensus 33 ~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~ 65 (369)
T 4dk0_A 33 VDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDS 65 (369)
T ss_dssp CCBCCCSCSBCCEECCCTTSCCCSSCCCEECCC
T ss_pred EEEecCCCcEEEEEEECCCCEECCCCEEEEEcC
Confidence 458899999999999999999999999999863
No 130
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=92.85 E-value=0.053 Score=38.26 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=25.4
Q ss_pred eccccceeeeeee-cCCCeeeCCCeEEEEcc
Q psy10619 216 HAPMPGLVKSVNC-KVGDQIMEGQELCVVGK 245 (246)
Q Consensus 216 ~sp~pg~i~~l~~-~~G~~v~~g~~~~v~e~ 245 (246)
..+++|-+..+.+ ++|+.|++||++++||-
T Consensus 32 a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs 62 (128)
T 3a7l_A 32 AQELLGDMVFVDLPEVGATVSAGDDCAVAES 62 (128)
T ss_dssp HHHHHCSEEEEECCCTTCEECTTCEEEEEEE
T ss_pred HhccCCceEEEEecCCCCEEeCCCEEEEEEe
Confidence 4567787887877 99999999999999983
No 131
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=92.84 E-value=0.06 Score=37.12 Aligned_cols=32 Identities=25% Similarity=0.419 Sum_probs=29.5
Q ss_pred cceeccccceeeeeeecCCCeeeCC-CeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEG-QELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g-~~~~v~e 244 (246)
..++||..|.+..+.++.|+.|..| ++|+.|.
T Consensus 68 ~~i~AP~~G~V~~~~~~~G~~v~~g~~~l~~i~ 100 (116)
T 2k32_A 68 TEIKAPFDGTIGDALVNIGDYVSASTTELVRVT 100 (116)
T ss_dssp EEEECSSSEEECCCSCCTTCEECTTTSCCEEEE
T ss_pred CEEEcCCCEEEEEEECCCCCEEcCCCcEEEEEE
Confidence 3699999999999999999999999 9999875
No 132
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=92.37 E-value=0.091 Score=44.81 Aligned_cols=32 Identities=28% Similarity=0.469 Sum_probs=29.7
Q ss_pred cceeccccceeeeeee-cCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNC-KVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~-~~G~~v~~g~~~~v~e 244 (246)
..+.++..|.|.++.+ +.||.|++||.|+.|+
T Consensus 122 ~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld 154 (413)
T 3ne5_B 122 AIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLT 154 (413)
T ss_dssp EEECCSSCEEEEEECSCCTTCEECTTCEEEEEE
T ss_pred EEEecccCEEEEEEEeCCCCCEEcCCCEEEEEc
Confidence 4588999999999998 9999999999999997
No 133
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*
Probab=91.94 E-value=0.044 Score=49.17 Aligned_cols=95 Identities=14% Similarity=0.134 Sum_probs=59.1
Q ss_pred HHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCC-CC---CCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCc
Q psy10619 62 FVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVN-II---PGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGK 137 (246)
Q Consensus 62 ~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip-~p---~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~ 137 (246)
+.+.+.+.+++++.|....+ +.||..+.-+.+.+ | .| +++ ...+. ++ .. -.+|+||..|..|.
T Consensus 475 ll~~l~~~~v~iieP~~~~l--lsNKailalLw~l~--p~hp~LLpT~--f~~~~-~l----~~--~~yV~KPi~gReG~ 541 (619)
T 2io8_A 475 LIDVLLRPEVLVFEPLWTVI--PGNKAILPILWSLF--PHHRYLLDTD--FTVND-EL----VK--TGYAVKPIAGRCGS 541 (619)
T ss_dssp HHHHHTCTTCEEESCGGGGT--TTSTTHHHHHHHHS--TTCTTCCCEE--SSCCH-HH----HH--HCEEEEETTCCTTT
T ss_pred HHHHHHhCCCEEECHHHHHH--hhhHHHHHHHHHhC--CCCCCCCCee--ecCCc-cc----cc--CCEEEccCCCCCCC
Confidence 34456667789986665544 89999988887765 3 33 432 12222 21 11 25899999999999
Q ss_pred eeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccC
Q psy10619 138 GMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKN 176 (246)
Q Consensus 138 gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~ 176 (246)
||.++...++. +.. ....+...+++.|+|++-
T Consensus 542 nV~i~~~~~~~---~~~----~~~~y~~~~~IyQe~~~l 573 (619)
T 2io8_A 542 NIDLVSHHEEV---LDK----TSGKFAEQKNIYQQLWCL 573 (619)
T ss_dssp TCEEECTTSCE---EEE----CCCTTTTSCEEEEECCCC
T ss_pred CEEEEeCCChh---Hhh----ccccccCCCeEEEEecCC
Confidence 99998652221 000 011234577899999974
No 134
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=90.92 E-value=0.22 Score=36.49 Aligned_cols=20 Identities=10% Similarity=0.174 Sum_probs=16.8
Q ss_pred eeeecCCCeeeCCCeEEEEc
Q psy10619 225 SVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 225 ~l~~~~G~~v~~g~~~~v~e 244 (246)
...++.||.|++||.|+.+.
T Consensus 97 ~~~V~~Gd~V~~G~~L~~~d 116 (161)
T 1f3z_A 97 KRIAEEGQRVKVGDTVIEFD 116 (161)
T ss_dssp EECSCTTCEECTTCEEEEEC
T ss_pred EEEEeCcCEECCCCEEEEEC
Confidence 33899999999999888764
No 135
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=90.53 E-value=0.23 Score=36.11 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=19.3
Q ss_pred cceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 220 PGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 220 pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
.|.--.+.++.||.|++||.|+.+.
T Consensus 87 ~G~gF~~~V~~Gd~V~~G~~L~~~d 111 (154)
T 2gpr_A 87 DGNGFESFVTQDQEVNAGDKLVTVD 111 (154)
T ss_dssp TTCSEEECCCTTCEECTTCEEEEEC
T ss_pred CCCceEEEEcCCCEEcCCCEEEEEC
Confidence 3334446899999999999988764
No 136
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=89.16 E-value=0.24 Score=36.39 Aligned_cols=27 Identities=26% Similarity=0.291 Sum_probs=20.4
Q ss_pred cccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 218 PMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 218 p~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
-+.|.--...++.||.|++||.|+.+.
T Consensus 90 ~l~G~gF~~~V~~Gd~V~~G~~L~~~d 116 (162)
T 1ax3_A 90 SLKGEGFTSFVSEGDRVEPGQKLLEVD 116 (162)
T ss_dssp TTTTTTEEESCCCCSEECSEEEEEEEC
T ss_pred hcCCCccEEEEeCCCEEcCCCEEEEEC
Confidence 344444556899999999999888764
No 137
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=83.66 E-value=0.72 Score=32.21 Aligned_cols=27 Identities=19% Similarity=0.234 Sum_probs=22.5
Q ss_pred ccceeeeeee-cCCCeeeCCCeEEEEcc
Q psy10619 219 MPGLVKSVNC-KVGDQIMEGQELCVVGK 245 (246)
Q Consensus 219 ~pg~i~~l~~-~~G~~v~~g~~~~v~e~ 245 (246)
+.|-|..+.+ ++|+.|++||++++||-
T Consensus 30 ~lGdiv~velp~vG~~v~~G~~~~~VES 57 (125)
T 3klr_A 30 ALGDVVYCSLPEVGTKLNKQEEFGALES 57 (125)
T ss_dssp HHCSEEEEECCCTTCEECTTCEEEEEEE
T ss_pred hCCCeEEEEeCCCCCEEcCCCEEEEEEE
Confidence 4567777776 79999999999999983
No 138
>2vob_A Trypanothione synthetase; ligase; 2.3A {Leishmania major} PDB: 2vps_A 2vpm_A
Probab=83.03 E-value=1.5 Score=39.62 Aligned_cols=95 Identities=14% Similarity=0.147 Sum_probs=39.3
Q ss_pred HHHHHc--CCeEeCCCHHHHHHhcCHHHHHHHHHHhC-CC-CCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCcee
Q psy10619 64 SRLKEE--GVVFIGPTAECIRGMGDKLESKKLAKEAG-VN-IIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGM 139 (246)
Q Consensus 64 ~~~~~~--g~~~~g~~~~~~~~~~dK~~~~~~l~~~g-ip-~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv 139 (246)
+.+... .+.++.|... .+.+||..+.-+-..+- -| .++++ +..... +..- ..|+||..|..|.||
T Consensus 490 ~~l~~~~~~v~~ieP~wk--~LlsNKaiLalLW~l~p~hp~LLpt~---f~~~~~----~~~~--~yV~KPi~gReG~nV 558 (652)
T 2vob_A 490 DLLLGDDWEILYFEPMWK--VIPSNKAILPMIYHNHPEHPAILKAE---YELTDE----LRKH--GYAKKPIVGRVGSNV 558 (652)
T ss_dssp HHHSSSCTTSEEESCGGG--GTTTSTTHHHHHHHHCTTCTTBCCEE---SSCCHH----HHHH--CEEEEECC-------
T ss_pred HHHhcCCCceEEeChhHH--HhhcCHHHHHHHHhcccCCCCCCchh---hcCCCc----cccC--CeEeccCCCCCCCCE
Confidence 445555 6777755433 35789998777666422 12 23322 121111 1112 489999999999999
Q ss_pred EEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccC
Q psy10619 140 RIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKN 176 (246)
Q Consensus 140 ~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~ 176 (246)
.+.....+. +... ...++..++++|+|++-
T Consensus 559 ~I~~~~~~~---~~~~----~g~y~~~~~IyQe~~~l 588 (652)
T 2vob_A 559 IITSGDGVV---HAES----GGKYGKRNMIYQQLFEL 588 (652)
T ss_dssp ---------------------------CEEEEECCC-
T ss_pred EEEcCCchh---hhhc----ccccCCCCeEEEecccC
Confidence 887543322 1111 11244578999999863
No 139
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=81.64 E-value=0.29 Score=41.94 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=0.0
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEcc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+.+|..|++.++.++.||.|..||+|++||-
T Consensus 46 ~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~ 78 (428)
T 3dva_I 46 VEIPSPVKGKVLEILVPEGTVATVGQTLITLDA 78 (428)
T ss_dssp ---------------------------------
T ss_pred EEEecCCCeEEEEEEeCCCCEeCCCCEEEEEec
Confidence 458999999999999999999999999999973
No 140
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=81.33 E-value=0.85 Score=38.74 Aligned_cols=32 Identities=19% Similarity=0.409 Sum_probs=29.7
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
-.++||..|++.++.++.|+.|..|++|+.|-
T Consensus 208 ~~I~AP~~G~V~~~~v~~G~~V~~G~~l~~I~ 239 (413)
T 3ne5_B 208 FTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQ 239 (413)
T ss_dssp EEEECSSSEEEEECCCCTTCEECTTSCSEEEE
T ss_pred EEEEcCCCeEEEEEEcCCCCEECCCCcEEEEe
Confidence 46999999999999999999999999999873
No 141
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=81.20 E-value=1.4 Score=36.21 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=27.9
Q ss_pred ccceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 212 TKILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 212 ~~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
...+++|..|++.. .++.||.|++||.|..|+
T Consensus 257 ~~~v~A~~~Gl~~~-~v~~Gd~V~~G~~la~I~ 288 (331)
T 3na6_A 257 DCYLFSEHDGLFEI-MIDLGEPVQEGDLVARVW 288 (331)
T ss_dssp CCCEECSSCEEEEE-SSCTTCEECTTCEEEEEE
T ss_pred cEEEeCCCCeEEEE-cCCCCCEEcCCCEEEEEE
Confidence 35689999998876 599999999999999875
No 142
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=79.57 E-value=0.37 Score=37.53 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=0.0
Q ss_pred cceeccccceeeeeeecCCCe-eeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQ-IMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~-v~~g~~~~v~e 244 (246)
..+.+|..|++.++.++.|+. |..|+.|++|+
T Consensus 47 ~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~ 79 (229)
T 1zy8_K 47 VTLDASDDGILAKIVVEEGSKNIRLGSLIGLIV 79 (229)
T ss_dssp ---------------------------------
T ss_pred eEEecCCCeEEEEEEecCCCeeecCCCEEEEEe
Confidence 458899999999999999997 99999999986
No 143
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=79.23 E-value=1.3 Score=37.07 Aligned_cols=31 Identities=29% Similarity=0.379 Sum_probs=27.6
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
.-++||..|++. ..++.||.|++||.|..|-
T Consensus 291 ~~v~A~~~Gl~~-~~v~lGd~V~kG~~la~I~ 321 (368)
T 3fmc_A 291 RKFHAPKAGMVE-YLGKVGVPMKATDPLVNLL 321 (368)
T ss_dssp EEEECSSCEEEE-ECSCTTCCBCTTCEEEEEE
T ss_pred EEEecCCCEEEE-EeCCCCCEeCCCCEEEEEE
Confidence 568999999998 6789999999999999874
No 144
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=78.97 E-value=0.94 Score=35.97 Aligned_cols=31 Identities=23% Similarity=0.428 Sum_probs=28.0
Q ss_pred ceeccccceeeeeeecCCCeeeCC--CeEEEEc
Q psy10619 214 ILHAPMPGLVKSVNCKVGDQIMEG--QELCVVG 244 (246)
Q Consensus 214 ~l~sp~pg~i~~l~~~~G~~v~~g--~~~~v~e 244 (246)
.++||..|+|..+.++.|+.|..| ++|+.|.
T Consensus 132 ~I~AP~~G~V~~~~~~~G~~v~~g~~~~l~~i~ 164 (277)
T 2f1m_A 132 KVTSPISGRIGKSNVTEGALVQNGQATALATVQ 164 (277)
T ss_dssp EECCSSCEEECCCSSCBTCEECTTCSSCSEEEE
T ss_pred EEECCCCeEEEeEEcCCCCEEcCCCCceeEEEe
Confidence 599999999999999999999999 4787763
No 145
>3k1t_A Glutamate--cysteine ligase GSHA; putative gamma-glutamylcysteine synthetase; HET: MSE; 1.90A {Methylobacillus flagellatus KT}
Probab=77.14 E-value=2.7 Score=35.22 Aligned_cols=65 Identities=17% Similarity=0.233 Sum_probs=45.3
Q ss_pred HHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHH---HhhcCCC
Q psy10619 90 SKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEA---AASFGDD 166 (246)
Q Consensus 90 ~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~---~~~~~~~ 166 (246)
.++-.+++||...|+ ++||...|.-|.||..++|.+|+...=++.+..- +....-+
T Consensus 265 Ir~KY~eygI~~~Pf---------------------V~VKADaGTYGMGImtV~s~~ev~~LNrK~RnKM~~~Keg~~v~ 323 (432)
T 3k1t_A 265 IRRKYAEYGVKQEPF---------------------VIVKADAGTYGMGIMTVKSADDVRDLNRKQRNKMSVVKEGLKVS 323 (432)
T ss_dssp HHHHHHHHTCCSCCC---------------------EEEEEECGGGCEEEEEESSGGGGSSCCHHHHHHHHCSSSSSCCC
T ss_pred HHHHHHHhCCCCCce---------------------EEEEcCCCCCCceEEEecCHHHHHHHhHHhhhhhhhccCCCccc
Confidence 455567888887763 5999999999999999999999865333322211 1111226
Q ss_pred ceEEEeccc
Q psy10619 167 RILVEKFIK 175 (246)
Q Consensus 167 ~~lve~~i~ 175 (246)
++||||=+.
T Consensus 324 ~VIIQEGV~ 332 (432)
T 3k1t_A 324 EVILQEGVY 332 (432)
T ss_dssp EEEEEECCC
T ss_pred eEEEecCcc
Confidence 799999886
No 146
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=77.06 E-value=2 Score=30.40 Aligned_cols=27 Identities=22% Similarity=0.260 Sum_probs=21.8
Q ss_pred ccceeeeeee-cCCCeeeCCCeEEEEcc
Q psy10619 219 MPGLVKSVNC-KVGDQIMEGQELCVVGK 245 (246)
Q Consensus 219 ~pg~i~~l~~-~~G~~v~~g~~~~v~e~ 245 (246)
+.|-+.-+.+ ++|+.|++||.+++||-
T Consensus 47 ~lGdiv~VelP~vG~~v~~G~~~~~VES 74 (137)
T 3tzu_A 47 ALGDLVFVQLPEVGETVSAGESCGEVES 74 (137)
T ss_dssp HHCSEEEEECCCTTCEECTTSEEEEEEE
T ss_pred hcCCeEEEEcCCCCCEEeCCCEEEEEEe
Confidence 3466666665 79999999999999984
No 147
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=77.06 E-value=0.78 Score=41.89 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=29.8
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
..+.||..|++.++.++.|+.|..||.|++||
T Consensus 687 ~~I~Ap~~G~V~~i~v~~G~~V~~G~~L~~i~ 718 (718)
T 3bg3_A 687 TVVTSPMEGTVRKVHVTKDMTLEGDDLILEIE 718 (718)
T ss_dssp EEECCCCCBCBCCCCCCSEEEECSSCEEECBC
T ss_pred eEEecCCCeEEEEEecCCCCEeCCCCEEEEeC
Confidence 56889999999999999999999999999886
No 148
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=76.84 E-value=27 Score=27.90 Aligned_cols=126 Identities=14% Similarity=0.229 Sum_probs=77.9
Q ss_pred CCCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcccc
Q psy10619 30 SYINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGII 109 (246)
Q Consensus 30 ~~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~ 109 (246)
.+.+...+++.+++.++..++.....-.-+..+.+.|++.|+.+ .+...+-+.+++.|+-+.. .+
T Consensus 106 P~~~~g~~Le~lk~~Gf~Gv~N~ptvglidG~fr~~LEE~gm~~-----------~~eve~I~~A~~~gL~Ti~----~v 170 (286)
T 2p10_A 106 PFMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSY-----------AQEVEMIAEAHKLDLLTTP----YV 170 (286)
T ss_dssp TTCCHHHHHHHHHHHTCCEEEECSCGGGCCHHHHHHHHHTTCCH-----------HHHHHHHHHHHHTTCEECC----EE
T ss_pred CCcCHHHHHHHHHHhCCceEEECCCcccccchhhhhHhhcCCCH-----------HHHHHHHHHHHHCCCeEEE----ec
Confidence 36778899999999999999533211113478899999999864 2345566778999999988 36
Q ss_pred CCHHHHHHHHHHhCCc-EEEEecc-CCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEec
Q psy10619 110 RDADHCVEIARDIGYP-VMIKASA-GGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKF 173 (246)
Q Consensus 110 ~~~~~~~~~~~~~~~P-~vvKp~~-g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~ 173 (246)
.+.+++...+ ..|-- +++-|-. .++..|....-+.++..+.++++....... +++++|--+
T Consensus 171 ~~~eeA~amA-~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~v--npdvivLc~ 233 (286)
T 2p10_A 171 FSPEDAVAMA-KAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTI--RDDIIILSH 233 (286)
T ss_dssp CSHHHHHHHH-HHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHH--CSCCEEEEE
T ss_pred CCHHHHHHHH-HcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHh--CCCcEEEec
Confidence 8899988654 55532 4555553 234456655567777666666665554433 344554433
No 149
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=76.46 E-value=1.5 Score=36.29 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=29.1
Q ss_pred cceeccccceeeeeeecCCCeeeC-CCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIME-GQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~-g~~~~v~e 244 (246)
..++||..|++..+.++.|+.|.. |++|+.|-
T Consensus 171 ~~i~AP~~G~V~~~~~~~G~~v~~~g~~l~~i~ 203 (359)
T 3lnn_A 171 LAVRSPINGRVVDLNAATGAYWNDTTASLMTVA 203 (359)
T ss_dssp EEEECSSCEEEEECCCCBTCEECCSSCCSEEEE
T ss_pred EEEECCCCEEEEEeecCCCceeCCCCcceEEEe
Confidence 359999999999999999999999 99998874
No 150
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=75.99 E-value=1.7 Score=35.65 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=28.4
Q ss_pred cceeccccceeeeeeecCCCeeeCCCe---EEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQE---LCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~---~~v~e 244 (246)
-.++||..|++..+.++.|+.|..|++ |+.|-
T Consensus 154 ~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~ 188 (341)
T 3fpp_A 154 TRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA 188 (341)
T ss_dssp SEEECSSSEEEEEESSCTTCEECCTTSCCCCEEEE
T ss_pred CEEECCCCeEEEEEecCCCCEEecCCCCceEEEEe
Confidence 359999999999999999999999997 77653
No 151
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=75.95 E-value=2.2 Score=30.39 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=21.1
Q ss_pred cceeeeeee-cCCCeeeCCCeEEEEcc
Q psy10619 220 PGLVKSVNC-KVGDQIMEGQELCVVGK 245 (246)
Q Consensus 220 pg~i~~l~~-~~G~~v~~g~~~~v~e~ 245 (246)
.|-|.-+.+ ++|+.|++||.+++||-
T Consensus 53 LGdIvfVelP~vG~~v~~Gd~~~~VES 79 (143)
T 3mxu_A 53 LGDLVFIDLPQNGTKLSKGDAAAVVES 79 (143)
T ss_dssp HCSEEEEECCCTTCEECTTCEEEEEEE
T ss_pred cCCeEEEEcCCCCCEeeCCCEEEEEEe
Confidence 456666655 78999999999999984
No 152
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=72.25 E-value=2.9 Score=34.70 Aligned_cols=31 Identities=23% Similarity=0.399 Sum_probs=25.9
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
.-++++..|++.. .++.|+.|++||.|..|+
T Consensus 268 ~~v~A~~~G~~~~-~~~~g~~V~~G~~La~i~ 298 (354)
T 3cdx_A 268 AYVMAPRTGLFEP-THYVGEEVRTGETAGWIH 298 (354)
T ss_dssp GEEECSSCEEEEE-SCCTTCEECTTSEEEEEE
T ss_pred EEEECCCCEEEEE-eCCCCCEeCCCCEEEEEE
Confidence 4578999996554 478999999999999875
No 153
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=70.43 E-value=2.1 Score=35.59 Aligned_cols=32 Identities=16% Similarity=0.352 Sum_probs=28.5
Q ss_pred cceeccccceeeeeeecCCCeeeCC--CeEEEEc
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEG--QELCVVG 244 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g--~~~~v~e 244 (246)
..++||+.|+|..+.++.|+.|..| ++|+.|-
T Consensus 138 ~~I~AP~~G~V~~~~v~~G~~V~~g~g~~l~~i~ 171 (369)
T 1vf7_A 138 TKVLSPISGRIGRSAVTEGALVTNGQANAMATVQ 171 (369)
T ss_dssp TEEECSSSEEECCCSSCBTCEECTTCSSCSEEEE
T ss_pred CEEECCCCeEEEEEEcCCCCeEcCCCCceeEEEe
Confidence 3599999999999999999999996 7888774
No 154
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=67.27 E-value=3.7 Score=34.94 Aligned_cols=23 Identities=30% Similarity=0.453 Sum_probs=20.4
Q ss_pred ceeeeeeecCCCeeeCCCeEEEE
Q psy10619 221 GLVKSVNCKVGDQIMEGQELCVV 243 (246)
Q Consensus 221 g~i~~l~~~~G~~v~~g~~~~v~ 243 (246)
+....+..+.||.|++||+|+.|
T Consensus 367 ~~Gi~~~~k~g~~v~~g~~l~~i 389 (423)
T 2dsj_A 367 GVGVYLLKKPGDRVERGEALALV 389 (423)
T ss_dssp TCEEEESCCTTCEECTTSEEEEE
T ss_pred CcCeeeeccCCCEeCCCCeEEEE
Confidence 45578899999999999999987
No 155
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=67.18 E-value=3.6 Score=35.12 Aligned_cols=24 Identities=21% Similarity=0.447 Sum_probs=20.8
Q ss_pred cceeeeeeecCCCeeeCCCeEEEE
Q psy10619 220 PGLVKSVNCKVGDQIMEGQELCVV 243 (246)
Q Consensus 220 pg~i~~l~~~~G~~v~~g~~~~v~ 243 (246)
++....+..+.||.|++||+|++|
T Consensus 374 ~~~Gi~~~~k~g~~v~~g~~l~~i 397 (433)
T 1brw_A 374 LAVGIVLHKKIGDRVQKGEALATI 397 (433)
T ss_dssp TTCEEEESCCTTCEECTTCEEEEE
T ss_pred cCcCeeEeccCCCEECCCCeEEEE
Confidence 355578999999999999999987
No 156
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=66.50 E-value=3.9 Score=34.95 Aligned_cols=24 Identities=29% Similarity=0.477 Sum_probs=21.3
Q ss_pred cceeeeeeecCCCeeeCCCeEEEE
Q psy10619 220 PGLVKSVNCKVGDQIMEGQELCVV 243 (246)
Q Consensus 220 pg~i~~l~~~~G~~v~~g~~~~v~ 243 (246)
++....+..++||.|++||+|+.|
T Consensus 377 ~~~Gi~l~~~~G~~V~~g~~l~~i 400 (436)
T 3h5q_A 377 LAVGIVLNKKIGDKVEEGESLLTI 400 (436)
T ss_dssp TTCEEEESCCTTCEECTTSEEEEE
T ss_pred CCCceEEecCCcCEeCCCCeEEEE
Confidence 466678999999999999999987
No 157
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=65.07 E-value=4.3 Score=35.10 Aligned_cols=23 Identities=22% Similarity=0.341 Sum_probs=20.1
Q ss_pred ceeeeeeecCCCeeeCCCeEEEE
Q psy10619 221 GLVKSVNCKVGDQIMEGQELCVV 243 (246)
Q Consensus 221 g~i~~l~~~~G~~v~~g~~~~v~ 243 (246)
+....+..++||.|++||+|+.|
T Consensus 410 ~~Gi~l~~k~G~~V~~g~~l~~i 432 (474)
T 1uou_A 410 GVGAELLVDVGQRLRRGTPWLRV 432 (474)
T ss_dssp SCEEEECSCTTCEECTTCEEEEE
T ss_pred CCceEEEccCCCEECCCCeEEEE
Confidence 34578899999999999999987
No 158
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=64.13 E-value=35 Score=28.57 Aligned_cols=91 Identities=12% Similarity=0.180 Sum_probs=56.2
Q ss_pred HHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeE
Q psy10619 61 SFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMR 140 (246)
Q Consensus 61 ~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~ 140 (246)
.+.+.+++.|++++... .|.. .-++|.++|++.-+--++...+..-+ +.+.+.|-|+++|- |+
T Consensus 105 ~L~~~~~~~Gi~~~stp-------fD~~-svd~l~~~~vd~~KIgS~~~~N~pLL-~~va~~gKPViLSt-------Gm- 167 (385)
T 1vli_A 105 PLLDYCREKQVIFLSTV-------CDEG-SADLLQSTSPSAFKIASYEINHLPLL-KYVARLNRPMIFST-------AG- 167 (385)
T ss_dssp HHHHHHHHTTCEEECBC-------CSHH-HHHHHHTTCCSCEEECGGGTTCHHHH-HHHHTTCSCEEEEC-------TT-
T ss_pred HHHHHHHHcCCcEEEcc-------CCHH-HHHHHHhcCCCEEEECcccccCHHHH-HHHHhcCCeEEEEC-------CC-
Confidence 56777888888888544 2332 23557777777644222345666544 44556788999873 44
Q ss_pred EeCCHHHHHHHHHHHHHHHHhhcCCCceEEEeccc
Q psy10619 141 IANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIK 175 (246)
Q Consensus 141 ~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~ 175 (246)
.+.+|+..+++.+.. .++.++++-+.+.
T Consensus 168 --aTl~Ei~~Ave~i~~-----~Gn~~iiLlhc~s 195 (385)
T 1vli_A 168 --AEISDVHEAWRTIRA-----EGNNQIAIMHCVA 195 (385)
T ss_dssp --CCHHHHHHHHHHHHT-----TTCCCEEEEEECS
T ss_pred --CCHHHHHHHHHHHHH-----CCCCcEEEEeccC
Confidence 278888888887653 2344565544444
No 159
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=64.08 E-value=5.8 Score=28.66 Aligned_cols=25 Identities=24% Similarity=0.314 Sum_probs=19.9
Q ss_pred ceeeeeee-cCCCeeeCCCeEEEEcc
Q psy10619 221 GLVKSVNC-KVGDQIMEGQELCVVGK 245 (246)
Q Consensus 221 g~i~~l~~-~~G~~v~~g~~~~v~e~ 245 (246)
|-|.-+.+ ++|+.|++||.+++||-
T Consensus 59 GdIvfVeLP~vG~~v~~Gd~~~~VES 84 (155)
T 3hgb_A 59 GDVVFVQLPVIGTAVTAGETFGEVES 84 (155)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEE
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEe
Confidence 55555544 78999999999999984
No 160
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=62.29 E-value=4.6 Score=30.07 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=18.5
Q ss_pred eeeeecCCCeeeCCCeEEEEcc
Q psy10619 224 KSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 224 ~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
.++.|+.||.|++||.|..+-.
T Consensus 83 ~~i~V~~G~~V~~Gq~IG~vG~ 104 (182)
T 3it5_A 83 DQIQVSNGQQVSADTKLGVYAG 104 (182)
T ss_dssp ESCCCCTTCEECTTCEEEEECS
T ss_pred CccccCCCCEEcCCCEEEeecC
Confidence 4677999999999999987643
No 161
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=62.06 E-value=3.6 Score=35.21 Aligned_cols=24 Identities=21% Similarity=0.254 Sum_probs=20.9
Q ss_pred cceeeeeeecCCCeeeCCCeEEEE
Q psy10619 220 PGLVKSVNCKVGDQIMEGQELCVV 243 (246)
Q Consensus 220 pg~i~~l~~~~G~~v~~g~~~~v~ 243 (246)
++....+..++||.|++||+|++|
T Consensus 379 ~~~Gi~~~~k~g~~v~~g~~l~~i 402 (440)
T 2tpt_A 379 YSVGFTDMARLGDQVDGQRPLAVI 402 (440)
T ss_dssp SSCEEESCCCTTCEEBTTBCSEEE
T ss_pred cCcCeeEeccCCCEECCCCeEEEE
Confidence 355678999999999999999987
No 162
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=61.44 E-value=2 Score=35.62 Aligned_cols=26 Identities=23% Similarity=0.368 Sum_probs=24.9
Q ss_pred ceeccccceeeeeeecCCCeeeCCCe
Q psy10619 214 ILHAPMPGLVKSVNCKVGDQIMEGQE 239 (246)
Q Consensus 214 ~l~sp~pg~i~~l~~~~G~~v~~g~~ 239 (246)
.++||..|+|..+.++.|+.|..|++
T Consensus 156 ~i~AP~~G~V~~~~~~~G~~v~~g~~ 181 (369)
T 4dk0_A 156 KITSPIDGTVISTPVSEGQTVNSNQT 181 (369)
T ss_dssp SCCCSCCSCCCBCCCCTTCBCCTTTS
T ss_pred EEECCCCeEEEEeeCCCCCCccCCCC
Confidence 49999999999999999999999998
No 163
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=58.19 E-value=6.5 Score=29.21 Aligned_cols=28 Identities=11% Similarity=0.130 Sum_probs=22.8
Q ss_pred eccccceeeeeeecCCCeeeCCCeEEEE
Q psy10619 216 HAPMPGLVKSVNCKVGDQIMEGQELCVV 243 (246)
Q Consensus 216 ~sp~pg~i~~l~~~~G~~v~~g~~~~v~ 243 (246)
+..+.|..=...++.||.|++||+|+..
T Consensus 110 TV~L~G~gF~~~V~~Gd~Vk~Gd~L~~f 137 (183)
T 3our_B 110 TVELKGEGFTRIAEEGQTVKAGDTVIEF 137 (183)
T ss_dssp GGGGTTTTEEECSCTTCEECTTCEEEEE
T ss_pred ccccCCccceEEEeCcCEEcCCCEEEEE
Confidence 3445666778899999999999999875
No 164
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=55.96 E-value=5.3 Score=28.19 Aligned_cols=33 Identities=24% Similarity=0.196 Sum_probs=28.2
Q ss_pred cceeccccceeeee---eecCCCeee---CCC-eEEEEcc
Q psy10619 213 KILHAPMPGLVKSV---NCKVGDQIM---EGQ-ELCVVGK 245 (246)
Q Consensus 213 ~~l~sp~pg~i~~l---~~~~G~~v~---~g~-~~~v~e~ 245 (246)
..+.||..|.|.++ .++.|+.|. .|| -|++|+-
T Consensus 75 ~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~~i~~ 114 (136)
T 1zko_A 75 ADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEI 114 (136)
T ss_dssp EEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEEEEE
T ss_pred EEEecCCCeEEEEEehhhccCccCcccCCCCCeEEEEEEE
Confidence 67999999999999 556799999 888 8888763
No 165
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=53.87 E-value=7.8 Score=30.31 Aligned_cols=22 Identities=27% Similarity=0.450 Sum_probs=18.6
Q ss_pred eeeeecCCCeeeCCCeEEEEcc
Q psy10619 224 KSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 224 ~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
.++.|+.||.|++||.|..+-.
T Consensus 133 ~~i~Vk~Gd~V~~Gq~IG~vG~ 154 (245)
T 3tuf_B 133 SEVSVEQGDKVKQNQVIGKSGK 154 (245)
T ss_dssp SEESCCTTCEECTTCEEEECBC
T ss_pred CccccCCCCEECCCCEEEEeCC
Confidence 4678999999999999987643
No 166
>1qwy_A Peptidoglycan hydrolase; LYTM lysostaphin metalloprotease asparagine switch; 1.30A {Staphylococcus aureus subsp} SCOP: b.84.3.2 PDB: 2b0p_A 2b13_A* 2b44_A
Probab=53.86 E-value=7.7 Score=31.14 Aligned_cols=21 Identities=19% Similarity=0.550 Sum_probs=18.1
Q ss_pred eeeeecCCCeeeCCCeEEEEc
Q psy10619 224 KSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 224 ~~l~~~~G~~v~~g~~~~v~e 244 (246)
.++.|+.||.|++||+|..+-
T Consensus 237 s~i~Vk~Gq~V~~GqvIG~vG 257 (291)
T 1qwy_A 237 NRLTVSAGDKVKAGDQIAYSG 257 (291)
T ss_dssp SEECCCTTCEECTTCEEEECC
T ss_pred CccccCCcCEECCCCEEEEEC
Confidence 467899999999999998764
No 167
>2lmc_B DNA-directed RNA polymerase subunit beta; transferase, transcription; NMR {Escherichia coli k-12}
Probab=53.56 E-value=2.6 Score=27.10 Aligned_cols=18 Identities=17% Similarity=0.447 Sum_probs=15.2
Q ss_pred eeeeecCCCeeeCCCeEE
Q psy10619 224 KSVNCKVGDQIMEGQELC 241 (246)
Q Consensus 224 ~~l~~~~G~~v~~g~~~~ 241 (246)
..+.|+.||.|.+||+|+
T Consensus 65 ~~l~V~eGd~V~~G~~Lt 82 (84)
T 2lmc_B 65 RQLNVFEGERVERGDVIS 82 (84)
T ss_dssp SCCSSCTTEEECBSCSSB
T ss_pred CceEeCCCCEECCCCCcc
Confidence 455799999999999875
No 168
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=51.48 E-value=41 Score=24.77 Aligned_cols=118 Identities=8% Similarity=-0.089 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCC-CCCc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV----FIGPTAECIRGMGDKLESKKLAKEAGVNII-PGFN 106 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p-~~~~ 106 (246)
.....+++.+++.++..++.+.+ ........++..|+. .+-.+...-..-.+....+.+++++|++.- ..+
T Consensus 106 ~~~~~~l~~l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v- 181 (231)
T 3kzx_A 106 DGAIELLDTLKENNITMAIVSNK---NGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVF- 181 (231)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEEE---EHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEE-
T ss_pred cCHHHHHHHHHHCCCeEEEEECC---CHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEE-
Confidence 45677888888888887765531 112344556666642 110111110111234678889999999765 432
Q ss_pred cccCCHHHHHHHHHHhCCcE-EEEeccCCCCceeEEeCCHHHHHHHHHHHH
Q psy10619 107 GIIRDADHCVEIARDIGYPV-MIKASAGGGGKGMRIANNDQEAIEGFKLSS 156 (246)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~P~-vvKp~~g~g~~gv~~v~~~~el~~~~~~~~ 156 (246)
.+-++..++. .++..|... .+.+.. .......+.+..++.+.+.++.
T Consensus 182 ~vGD~~~Di~-~a~~aG~~~v~~~~~~--~~~~~~~~~~~~el~~~l~~~l 229 (231)
T 3kzx_A 182 FIGDSISDIQ-SAIEAGCLPIKYGSTN--IIKDILSFKNFYDIRNFICQLI 229 (231)
T ss_dssp EEESSHHHHH-HHHHTTCEEEEECC-------CCEEESSHHHHHHHHHHHH
T ss_pred EEcCCHHHHH-HHHHCCCeEEEECCCC--CCCCceeeCCHHHHHHHHHHHh
Confidence 1335555544 566788754 442222 1234567899999988887653
No 169
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=50.30 E-value=88 Score=25.10 Aligned_cols=90 Identities=16% Similarity=0.117 Sum_probs=49.3
Q ss_pred HHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeE
Q psy10619 61 SFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMR 140 (246)
Q Consensus 61 ~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~ 140 (246)
.+.+.+++.|++++... .|.... +++.++ ++.-..-...+++.+-+. .+.+.+.|+++|--..
T Consensus 103 ~L~~~~~e~GLpv~Tev-------~D~~~v-~~l~~~-vd~lkIgA~~~~n~~LLr-~va~~gkPVilK~Gms------- 165 (298)
T 3fs2_A 103 VFSDLKKEYGFPVLTDI-------HTEEQC-AAVAPV-VDVLQIPAFLCRQTDLLI-AAARTGRVVNVKKGQF------- 165 (298)
T ss_dssp HHHHHHHHHCCCEEEEC-------CSHHHH-HHHTTT-CSEEEECGGGTTCHHHHH-HHHHTTSEEEEECCTT-------
T ss_pred HHHHHHHhcCCeEEEEe-------CCHHHH-HHHHhh-CCEEEECccccCCHHHHH-HHHccCCcEEEeCCCC-------
Confidence 44566677888877322 333322 234443 333221112456666444 4568899999985432
Q ss_pred EeCCHHHHHHHHHHHHHHHHhhcCCCceEE-Eecc
Q psy10619 141 IANNDQEAIEGFKLSSQEAAASFGDDRILV-EKFI 174 (246)
Q Consensus 141 ~v~~~~el~~~~~~~~~~~~~~~~~~~~lv-e~~i 174 (246)
-+.+|+..+++.+.. .++.++++ |.=+
T Consensus 166 --~t~~ei~~ave~i~~-----~Gn~~iiL~erg~ 193 (298)
T 3fs2_A 166 --LAPWDMKNVLAKITE-----SGNPNVLATERGV 193 (298)
T ss_dssp --CCGGGHHHHHHHHHT-----TTCCCEEEEECCE
T ss_pred --CCHHHHHHHHHHHHH-----cCCCeEEEEECCC
Confidence 367888888877653 23455544 5433
No 170
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=50.14 E-value=54 Score=27.42 Aligned_cols=113 Identities=16% Similarity=0.226 Sum_probs=61.1
Q ss_pred HHHHHHHHhCCCEEcccc--------cc--CCCC--HHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCC
Q psy10619 36 KIIDAIRQTRADAVHPGY--------GF--LSEN--ASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIP 103 (246)
Q Consensus 36 ~l~~~~~~~~~d~v~~~~--------~~--~~e~--~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~ 103 (246)
.+++.+++.+.|+|.... .+ ++.. ..+.+.+++.|++++... .|.... +++.++ ++.-.
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~-------~d~~~~-~~l~~~-vd~lk 230 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEI-------VTPADI-EVALDY-VDVIQ 230 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC-------CSGGGH-HHHTTT-CSEEE
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEec-------CCHHHH-HHHHhh-CCEEE
Confidence 445567778999886442 01 1111 145566677888877332 222222 223333 33211
Q ss_pred CCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEE-Ee
Q psy10619 104 GFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILV-EK 172 (246)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lv-e~ 172 (246)
--.+.+.+. ++...+.+.|-|+++|--.. .+.+|+..+++.+.. .++.++++ +.
T Consensus 231 Igs~~~~n~-~LL~~~a~~gkPVilk~G~~---------~t~~e~~~Ave~i~~-----~Gn~~i~L~~r 285 (385)
T 3nvt_A 231 IGARNMQNF-ELLKAAGRVDKPILLKRGLS---------ATIEEFIGAAEYIMS-----QGNGKIILCER 285 (385)
T ss_dssp ECGGGTTCH-HHHHHHHTSSSCEEEECCTT---------CCHHHHHHHHHHHHT-----TTCCCEEEEEC
T ss_pred ECcccccCH-HHHHHHHccCCcEEEecCCC---------CCHHHHHHHHHHHHH-----cCCCeEEEEEC
Confidence 001234554 45556678899999985432 378898888887753 23445544 44
No 171
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=48.67 E-value=10 Score=30.37 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=17.9
Q ss_pred eeeeecCCCeeeCCCeEEEEc
Q psy10619 224 KSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 224 ~~l~~~~G~~v~~g~~~~v~e 244 (246)
.++.|+.||.|++||.|..+-
T Consensus 230 ~~i~V~~G~~V~~Gq~IG~vG 250 (282)
T 2hsi_A 230 SKIDVKLGQQVPRGGVLGKVG 250 (282)
T ss_dssp SEECSCTTCEECTTCEEEECC
T ss_pred CccccCCcCEECCCCEEEEEC
Confidence 467899999999999998654
No 172
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=46.92 E-value=12 Score=29.46 Aligned_cols=19 Identities=26% Similarity=0.457 Sum_probs=16.6
Q ss_pred eecCCCeeeCCCeEEEEcc
Q psy10619 227 NCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 227 ~~~~G~~v~~g~~~~v~e~ 245 (246)
.|+.||.|++||.|..+-.
T Consensus 183 ~V~~G~~V~~Gq~IG~vG~ 201 (252)
T 3nyy_A 183 ELEKGDPVKAGDLLGYMGD 201 (252)
T ss_dssp SCCTTCEECTTCEEEECBC
T ss_pred cCCCCCEECCCCEEEEECC
Confidence 8999999999999987643
No 173
>1b04_A Protein (DNA ligase); DNA replication; 2.80A {Geobacillus stearothermophilus} SCOP: d.142.2.2
Probab=46.82 E-value=27 Score=28.43 Aligned_cols=36 Identities=11% Similarity=0.177 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHh
Q psy10619 86 DKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDI 122 (246)
Q Consensus 86 dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~ 122 (246)
+.....++|++.|+|+++.. ..+.+.+++.++.+.+
T Consensus 233 t~~e~l~~L~~~Gf~v~~~~-~~~~~~~ev~~~~~~~ 268 (318)
T 1b04_A 233 SHSEALDYLQALGFKVNPER-RRCANIDEVIAFVSEW 268 (318)
T ss_dssp BHHHHHHHHHHTTCCCCTTC-EEESSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCcc-eEeCCHHHHHHHHHHH
Confidence 34455677777888877642 3567777776665544
No 174
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=46.55 E-value=16 Score=29.82 Aligned_cols=29 Identities=31% Similarity=0.668 Sum_probs=25.3
Q ss_pred ceeccccceeeeeeecCCCeeeCCCeEEEE
Q psy10619 214 ILHAPMPGLVKSVNCKVGDQIMEGQELCVV 243 (246)
Q Consensus 214 ~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~ 243 (246)
.++++..|+.. -.++.|+.|++||.|..+
T Consensus 259 ~~~a~~~G~~~-~~~~~g~~V~~G~~la~i 287 (332)
T 2qj8_A 259 QLKSPSPGIFE-PRCSVMDEVEQGDVVGVL 287 (332)
T ss_dssp EEECSSSEEEE-ECSCTTCEECTTCEEEEE
T ss_pred EEeCCCCeEEE-EeCCCCCEeCCCCEEEEE
Confidence 47899999887 668899999999999876
No 175
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=45.32 E-value=98 Score=24.65 Aligned_cols=90 Identities=18% Similarity=0.185 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeE
Q psy10619 61 SFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMR 140 (246)
Q Consensus 61 ~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~ 140 (246)
.+.+.+++.|++++... .|.... +++.++ ++.-.--...+++.+-+. .+.+.+.|+++|--..
T Consensus 82 ~L~~~~~e~Glp~~Tev-------~d~~~v-~~l~~~-vd~lqIgA~~~~n~~LLr-~va~~gkPVilK~G~~------- 144 (285)
T 3sz8_A 82 IFAEVKARFGVPVITDV-------HEAEQA-APVAEI-ADVLQVPAFLARQTDLVV-AIAKAGKPVNVKKPQF------- 144 (285)
T ss_dssp HHHHHHHHHCCCEEEEC-------CSGGGH-HHHHTT-CSEEEECGGGTTCHHHHH-HHHHTSSCEEEECCTT-------
T ss_pred HHHHHHHhcCCeEEEEe-------CCHHHH-HHHHHh-CCEEEECccccCCHHHHH-HHHccCCcEEEeCCCC-------
Confidence 45666778888887322 333322 334444 443221112456666444 4567899999995432
Q ss_pred EeCCHHHHHHHHHHHHHHHHhhcCCCceEE-Eecc
Q psy10619 141 IANNDQEAIEGFKLSSQEAAASFGDDRILV-EKFI 174 (246)
Q Consensus 141 ~v~~~~el~~~~~~~~~~~~~~~~~~~~lv-e~~i 174 (246)
-+.+|+..+++.+.. .++.++++ |.=+
T Consensus 145 --~t~~ei~~ave~i~~-----~Gn~~i~L~erg~ 172 (285)
T 3sz8_A 145 --MSPTQLKHVVSKCGE-----VGNDRVMLCERGS 172 (285)
T ss_dssp --SCGGGTHHHHHHHHH-----TTCCCEEEEECCE
T ss_pred --CCHHHHHHHHHHHHH-----cCCCcEEEEeCCC
Confidence 366777788777654 23555544 5433
No 176
>3jsl_A DNA ligase; NAD+-dependent, DNA damage, DNA repair, DNA replication, magnesium, manganese, metal-binding, NAD, zinc; HET: DNA; 1.80A {Staphylococcus aureus} SCOP: d.142.2.2 PDB: 3jsn_A*
Probab=44.81 E-value=39 Score=27.46 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHH
Q psy10619 87 KLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARD 121 (246)
Q Consensus 87 K~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~ 121 (246)
.....++|++.|+++.+.. ..+.+.+++.++.+.
T Consensus 232 ~~e~l~~L~~~GF~v~~~~-~~~~~~~ev~~~~~~ 265 (318)
T 3jsl_A 232 QSEALDELDKLGFTTNKNR-ARVNNIDGVLEYIEK 265 (318)
T ss_dssp HHHHHHHHHHHTCCCCTTC-EEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCcCCcc-eEeCCHHHHHHHHHH
Confidence 3445566667777765543 355666666555544
No 177
>3csq_A Morphogenesis protein 1; hydrolase, infection, late protein; 1.80A {Bacteriophage phi-29}
Probab=44.71 E-value=10 Score=31.12 Aligned_cols=20 Identities=20% Similarity=0.429 Sum_probs=17.2
Q ss_pred eeeecCCCeeeCCCeEEEEc
Q psy10619 225 SVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 225 ~l~~~~G~~v~~g~~~~v~e 244 (246)
++.|+.||.|++||.|..+-
T Consensus 250 ~~~V~~G~~V~~Gq~Ig~~G 269 (334)
T 3csq_A 250 PLPFDVGKKLKKGDLMGHTG 269 (334)
T ss_dssp SCCCCTTCEECTTSEEEECB
T ss_pred cccCCCcCEECCCCEEEeec
Confidence 56799999999999998654
No 178
>3uq8_A DNA ligase; adenylated protein, ATP-grAsp, rossman fold, adenylation; HET: DNA NAD AMP; 1.70A {Haemophilus influenzae} PDB: 3pn1_A* 3bac_A*
Probab=43.05 E-value=36 Score=27.69 Aligned_cols=36 Identities=22% Similarity=0.364 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHh
Q psy10619 86 DKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDI 122 (246)
Q Consensus 86 dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~ 122 (246)
+.....++|++.|+|+++.. ..+.+.+++.++.+.+
T Consensus 237 t~~e~l~~L~~~Gf~v~~~~-~~~~~~~ev~~~~~~~ 272 (322)
T 3uq8_A 237 THYARLQWLKSIGIPVNPEI-RLCNGADEVLGFYRDI 272 (322)
T ss_dssp BHHHHHHHHHHTTCCCCTTC-EEEESHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCCc-EEeCCHHHHHHHHHHH
Confidence 34455666777777776643 3566667666665543
No 179
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=42.85 E-value=47 Score=25.36 Aligned_cols=121 Identities=7% Similarity=-0.081 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe-Ee---CCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV-FI---GPTAECIRGMGDKLESKKLAKEAGVNIIPGFNG 107 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~-~~---g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 107 (246)
.....+++.+++.++...+.+.+. . .+...++..|+. .+ ..+...-..--+......+++++|++.-..+ .
T Consensus 109 ~~~~~~l~~l~~~g~~~~i~tn~~--~--~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~-~ 183 (263)
T 3k1z_A 109 DGAEDTLRECRTRGLRLAVISNFD--R--RLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAA-H 183 (263)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESCC--T--THHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEE-E
T ss_pred cCHHHHHHHHHhCCCcEEEEeCCc--H--HHHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEE-E
Confidence 355777888888888776655311 1 245667777752 11 0111111122355678888999999754432 1
Q ss_pred ccCCH-HHHHHHHHHhCCcEEEEeccCCCC-------ceeEEeCCHHHHHHHHHHHHHH
Q psy10619 108 IIRDA-DHCVEIARDIGYPVMIKASAGGGG-------KGMRIANNDQEAIEGFKLSSQE 158 (246)
Q Consensus 108 ~~~~~-~~~~~~~~~~~~P~vvKp~~g~g~-------~gv~~v~~~~el~~~~~~~~~~ 158 (246)
+-.+. .++. .++..|.+++.=....... ..-.++.+..++.+.+..+...
T Consensus 184 vGD~~~~Di~-~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~~~~~ 241 (263)
T 3k1z_A 184 VGDNYLCDYQ-GPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDCLEGS 241 (263)
T ss_dssp EESCHHHHTH-HHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHHHHHC
T ss_pred ECCCcHHHHH-HHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHHHHhc
Confidence 33454 4544 5677888876655443222 2345689999999888877653
No 180
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=39.53 E-value=1.1e+02 Score=22.22 Aligned_cols=69 Identities=16% Similarity=0.244 Sum_probs=46.5
Q ss_pred HHHHHHHHHhCCCEEccccccCCCCH-----------HHHHHHHHcCCeEeCCCHHHHHHh------cCHHHHHHHHHH-
Q psy10619 35 DKIIDAIRQTRADAVHPGYGFLSENA-----------SFVSRLKEEGVVFIGPTAECIRGM------GDKLESKKLAKE- 96 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~~~~~~e~~-----------~~~~~~~~~g~~~~g~~~~~~~~~------~dK~~~~~~l~~- 96 (246)
+.+.++++++++|.+..---|+..|. ...-.+.+.|+|+.-.++..+... -+|.......++
T Consensus 53 ~~l~~~i~~~~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~~vKkavtG~G~A~K~QV~~mV~~l 132 (166)
T 4ep4_A 53 ARVLEVLHRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPMQVKQALAGHGHAAKEEVALMVRGI 132 (166)
T ss_dssp HHHHHHHHHHCCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHHHHHHHHHSSTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 56777899999998875433444442 122344678999988888877655 478877776665
Q ss_pred hCCCCCC
Q psy10619 97 AGVNIIP 103 (246)
Q Consensus 97 ~gip~p~ 103 (246)
++++.++
T Consensus 133 L~l~~~p 139 (166)
T 4ep4_A 133 LGLKEAP 139 (166)
T ss_dssp TTCSSCC
T ss_pred hcCCCCC
Confidence 5776554
No 181
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=39.35 E-value=55 Score=21.34 Aligned_cols=20 Identities=20% Similarity=0.454 Sum_probs=17.5
Q ss_pred CHHHHHHHHHHhCCCEEccc
Q psy10619 33 NVDKIIDAIRQTRADAVHPG 52 (246)
Q Consensus 33 ~~~~l~~~~~~~~~d~v~~~ 52 (246)
+.+.+.+++++++++.++.+
T Consensus 39 ~~~~l~~li~e~~v~~iVvG 58 (98)
T 1iv0_A 39 DVEALLDFVRREGLGKLVVG 58 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 45789999999999999877
No 182
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=39.34 E-value=17 Score=30.11 Aligned_cols=20 Identities=25% Similarity=0.534 Sum_probs=16.4
Q ss_pred eeeecCCCeeeCCCeEEEEc
Q psy10619 225 SVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 225 ~l~~~~G~~v~~g~~~~v~e 244 (246)
++.|+.||.|++||.|..+-
T Consensus 283 ~~~v~~G~~V~~G~~Ig~~G 302 (361)
T 2gu1_A 283 KILVKKGQLVKRGQKIALAG 302 (361)
T ss_dssp EECCCTTCEECTTCEEEECC
T ss_pred ccccCCcCEECCCCEEEEEC
Confidence 35688999999999998654
No 183
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=39.19 E-value=18 Score=24.43 Aligned_cols=64 Identities=16% Similarity=0.178 Sum_probs=37.3
Q ss_pred CCChhhhccceeEEcCCCCcCCCC-CC----------HHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeC
Q psy10619 8 VFQRHVKLADEAVCIGPPVAAQSY-IN----------VDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIG 75 (246)
Q Consensus 8 ~~~~~~~~ad~~~~~~~~~~~~~~-~~----------~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g 75 (246)
.-.+|+-.|..+.++........+ .+ ...+.+++.+.++|+|+.+. --......|.+.|+.++.
T Consensus 19 ~V~~hFG~a~~F~I~d~~~~~~~~~~~~~~~~~~~g~g~~~~~~l~~~gv~~vi~~~----iG~~a~~~L~~~GI~v~~ 93 (120)
T 2wfb_A 19 LVDPRFGRAAGFVVVDAATMAAEYVDNGASQTLSHGAGINAAQVLAKSGAGVLLTGY----VGPKAFQALQAAGIKVGQ 93 (120)
T ss_dssp BBCSCSTTCSEEEEEETTSCCEEEEECHHHHTCSSCHHHHHHHHHHHHTEEEEECSC----CCHHHHHHHHHTTCEEEC
T ss_pred cccCccccCCEEEEEEecCCeEEEEeccCCccCCCCchHHHHHHHHHCCCCEEEECC----CCHhHHHHHHHCCCEEEE
Confidence 345777778888776533222111 11 11466667778888888662 223456677788887774
No 184
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=38.46 E-value=1.1e+02 Score=22.20 Aligned_cols=118 Identities=8% Similarity=-0.039 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNG 107 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 107 (246)
.....+++.+++.++...+.+.+ ........++..|+. .+-.+...-..-.+......+++++|++.-..+ .
T Consensus 102 ~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~-~ 177 (233)
T 3umb_A 102 PENVPVLRQLREMGLPLGILSNG---NPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL-F 177 (233)
T ss_dssp TTHHHHHHHHHTTTCCEEEEESS---CHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE-E
T ss_pred CCHHHHHHHHHhCCCcEEEEeCC---CHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE-E
Confidence 34566777777777777665531 112334455655542 110111111112244567888999998754432 1
Q ss_pred ccCCHHHHHHHHHHhCCcEEEEeccCCCC-----ceeEEeCCHHHHHHHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPVMIKASAGGGG-----KGMRIANNDQEAIEGFKL 154 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~vvKp~~g~g~-----~gv~~v~~~~el~~~~~~ 154 (246)
+-.+..++ ..++..|.+++.=...+... ..-.++++.+|+.+.+..
T Consensus 178 vGD~~~Di-~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l~~ 228 (233)
T 3umb_A 178 VSSNGWDA-CGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQA 228 (233)
T ss_dssp EESCHHHH-HHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHHHC
T ss_pred EeCCHHHH-HHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHHHH
Confidence 23454454 45677898876643333221 234578999998887654
No 185
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=38.19 E-value=32 Score=28.15 Aligned_cols=45 Identities=16% Similarity=0.331 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhCCCEEccccccCCCCH--HHHHHHHHcCCeEeCCCH
Q psy10619 34 VDKIIDAIRQTRADAVHPGYGFLSENA--SFVSRLKEEGVVFIGPTA 78 (246)
Q Consensus 34 ~~~l~~~~~~~~~d~v~~~~~~~~e~~--~~~~~~~~~g~~~~g~~~ 78 (246)
.+.+++.|.+.++..++...+.+++.. .+.+..++.|++++||+.
T Consensus 93 ~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~~~g~rliGPNc 139 (334)
T 3mwd_B 93 YDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPAT 139 (334)
T ss_dssp HHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEECSSC
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEccCC
Confidence 367778888788887776444444432 566677888999998873
No 186
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=38.12 E-value=69 Score=22.28 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=27.1
Q ss_pred HHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCH
Q psy10619 35 DKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTA 78 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~ 78 (246)
..+++.|.+.++..++...+. ....+.+.+++.|++++|+..
T Consensus 91 ~~vv~~~~~~gi~~i~~~~g~--~~~~l~~~a~~~Gi~vvGpnc 132 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQYNT--YNREASKKADEAGLIIVANRC 132 (144)
T ss_dssp HHHHHHHHHHTCSEEEECTTC--CCHHHHHHHHHTTCEEEESCC
T ss_pred HHHHHHHHHcCCCEEEECCCc--hHHHHHHHHHHcCCEEEcCCc
Confidence 444555556677776644433 345677788888888887653
No 187
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=38.05 E-value=77 Score=21.53 Aligned_cols=41 Identities=20% Similarity=0.084 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCC
Q psy10619 35 DKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPT 77 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~ 77 (246)
..+++-|.+.++..++...|+ ++.++.+.+++.|++++++.
T Consensus 72 ~~~v~e~~~~g~k~v~~~~G~--~~~e~~~~a~~~Girvv~nC 112 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIFNPGT--ENEELEEILSENGIEPVIGC 112 (122)
T ss_dssp GGGHHHHHHHCCSEEEECTTC--CCHHHHHHHHHTTCEEEESC
T ss_pred HHHHHHHHhcCCCEEEECCCC--ChHHHHHHHHHcCCeEECCc
Confidence 344556666788877755555 45678888889999988643
No 188
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=37.85 E-value=1.2e+02 Score=22.54 Aligned_cols=117 Identities=11% Similarity=0.020 Sum_probs=66.9
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe------EeCCCHHHH-HHhcCHHHHHHHHHHhCCCCCCC
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV------FIGPTAECI-RGMGDKLESKKLAKEAGVNIIPG 104 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~------~~g~~~~~~-~~~~dK~~~~~~l~~~gip~p~~ 104 (246)
.....+++.+++.++...+.+.+ ........++..|+. ++. +...- ..-.+...++.+++++|++.-..
T Consensus 113 ~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~i~~-~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 188 (259)
T 4eek_A 113 EGAAETLRALRAAGVPFAIGSNS---ERGRLHLKLRVAGLTELAGEHIYD-PSWVGGRGKPHPDLYTFAAQQLGILPERC 188 (259)
T ss_dssp TTHHHHHHHHHHHTCCEEEECSS---CHHHHHHHHHHTTCHHHHCSCEEC-GGGGTTCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred ccHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHhcChHhhccceEEe-HhhcCcCCCCChHHHHHHHHHcCCCHHHE
Confidence 45677888888888887765531 112345566666653 331 11111 12234556788999999975443
Q ss_pred CccccCCHHHHHHHHHHhCCcE-EEEeccCC--C-------CceeEEeCCHHHHHHHHHH
Q psy10619 105 FNGIIRDADHCVEIARDIGYPV-MIKASAGG--G-------GKGMRIANNDQEAIEGFKL 154 (246)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~P~-vvKp~~g~--g-------~~gv~~v~~~~el~~~~~~ 154 (246)
+ .+-++..++ ..++..|.++ .+.+.... . ...-.++.+.+|+.+.+..
T Consensus 189 i-~iGD~~~Di-~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~ 246 (259)
T 4eek_A 189 V-VIEDSVTGG-AAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAE 246 (259)
T ss_dssp E-EEESSHHHH-HHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHH
T ss_pred E-EEcCCHHHH-HHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHh
Confidence 2 133455554 4566788874 44432111 0 1123678999999888765
No 189
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=37.41 E-value=67 Score=22.93 Aligned_cols=118 Identities=13% Similarity=0.064 Sum_probs=63.4
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNG 107 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 107 (246)
.....+++.+++.++...+.+.+ ........++..|+. .+..+...-..-.+...++.+++++|++.-... .
T Consensus 87 ~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i-~ 162 (216)
T 2pib_A 87 PGVREALEFVKSKRIKLALATST---PQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVV-V 162 (216)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEE-E
T ss_pred cCHHHHHHHHHHCCCCEEEEeCC---cHHhHHHHHHhcChHHhcCEEeecccCCCCCcCcHHHHHHHHHcCCCCceEE-E
Confidence 35567778888887776665531 112344556666652 111111111112345678888999998765433 1
Q ss_pred ccCCHHHHHHHHHHhCCcEE--EEeccCCCC----ceeEEeCCHHHHHHHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPVM--IKASAGGGG----KGMRIANNDQEAIEGFKL 154 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~v--vKp~~g~g~----~gv~~v~~~~el~~~~~~ 154 (246)
.-++..++ ..++..|.+.+ .=....... ..-.++.+.+|+...+.+
T Consensus 163 iGD~~~Di-~~a~~aG~~~i~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~~ 214 (216)
T 2pib_A 163 FEDSKSGV-EAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLKE 214 (216)
T ss_dssp EECSHHHH-HHHHHTTCCEEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHHH
T ss_pred EeCcHHHH-HHHHHcCCcEEehccCCCCCchhhcchhheeeCCHHHHHHHHHH
Confidence 33455554 45677898877 322221111 223456777777766654
No 190
>1ta8_A DNA ligase, NAD-dependent; nucleotidyl transferase fold; HET: DNA NMN; 1.80A {Enterococcus faecalis} SCOP: d.142.2.2 PDB: 3ba8_A* 1tae_A* 3ba9_A* 3baa_A* 3bab_A*
Probab=36.64 E-value=62 Score=26.45 Aligned_cols=36 Identities=11% Similarity=0.142 Sum_probs=22.7
Q ss_pred CHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHh
Q psy10619 86 DKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDI 122 (246)
Q Consensus 86 dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~ 122 (246)
+.....++|++.|+|+++.. ..+.+.+++.++.+.+
T Consensus 239 t~~e~l~~L~~~GF~v~~~~-~~~~~~~ev~~~~~~~ 274 (332)
T 1ta8_A 239 TQFEALEELSAIGFRTNPER-QLCQSIDEVWAYIEEY 274 (332)
T ss_dssp BHHHHHHHHHHTTCCCCTTC-EEESSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCcc-eEeCCHHHHHHHHHHH
Confidence 34455677777888877642 3567777776665443
No 191
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=36.56 E-value=37 Score=23.83 Aligned_cols=18 Identities=28% Similarity=0.091 Sum_probs=10.8
Q ss_pred HHHHHHHHhCCCEEcccc
Q psy10619 36 KIIDAIRQTRADAVHPGY 53 (246)
Q Consensus 36 ~l~~~~~~~~~d~v~~~~ 53 (246)
.+.+.+++.++|+|+...
T Consensus 87 ~i~d~i~~g~i~lVInt~ 104 (143)
T 2yvq_A 87 SIRKLIRDGSIDLVINLP 104 (143)
T ss_dssp CHHHHHHTTSCCEEEECC
T ss_pred cHHHHHHCCCceEEEECC
Confidence 356666666666666553
No 192
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=36.22 E-value=1.1e+02 Score=21.51 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=30.5
Q ss_pred cCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEE
Q psy10619 85 GDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVM 127 (246)
Q Consensus 85 ~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~v 127 (246)
.+....+++++++|++.|.|......+.++..+.++..|+.+.
T Consensus 76 d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~ 118 (170)
T 3me7_A 76 DTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFM 118 (170)
T ss_dssp CCHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCE
T ss_pred CCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEe
Confidence 3566788999999999877532123567778888888776543
No 193
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=35.30 E-value=90 Score=21.72 Aligned_cols=42 Identities=12% Similarity=0.062 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCH
Q psy10619 35 DKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTA 78 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~ 78 (246)
..+++-+.+.++..++...+. ....+.+.+++.|++++|+..
T Consensus 84 ~~v~~~~~~~g~~~i~i~~~~--~~~~l~~~a~~~Gi~~igpnc 125 (145)
T 2duw_A 84 WGVAQEAIAIGAKTLWLQLGV--INEQAAVLAREAGLSVVMDRC 125 (145)
T ss_dssp HHHHHHHHHHTCCEEECCTTC--CCHHHHHHHHTTTCEEECSCC
T ss_pred HHHHHHHHHcCCCEEEEcCCh--HHHHHHHHHHHcCCEEEcCCe
Confidence 445544555777777655443 245777888888898888763
No 194
>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Probab=34.79 E-value=15 Score=23.39 Aligned_cols=12 Identities=25% Similarity=0.407 Sum_probs=9.7
Q ss_pred eeCCCeEEEEcc
Q psy10619 234 IMEGQELCVVGK 245 (246)
Q Consensus 234 v~~g~~~~v~e~ 245 (246)
+++||+|-|||+
T Consensus 36 ~~kGd~vevle~ 47 (82)
T 1u3o_A 36 IQVGQTVELLER 47 (82)
T ss_dssp BCTTCEEEESSC
T ss_pred EcCCCEEEEEec
Confidence 678888888886
No 195
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=34.54 E-value=1.1e+02 Score=22.18 Aligned_cols=117 Identities=11% Similarity=0.029 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccc
Q psy10619 33 NVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGI 108 (246)
Q Consensus 33 ~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~ 108 (246)
....+++.+++.++...+.+.. ........++..|+. .+..+...-..--+...+...++++|++.-... .+
T Consensus 88 g~~~~l~~L~~~g~~~~i~tn~---~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l-~V 163 (216)
T 3kbb_A 88 GVREALEFVKSKRIKLALATST---PQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVV-VF 163 (216)
T ss_dssp THHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEE-EE
T ss_pred cHHHHHHHHHHcCCCcccccCC---cHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccceE-EE
Confidence 3456666677777666554421 112333445555542 111111111112356678888999998643332 12
Q ss_pred cCCHHHHHHHHHHhCCcEEEEeccCCCCc------eeEEeCCHHHHHHHHHH
Q psy10619 109 IRDADHCVEIARDIGYPVMIKASAGGGGK------GMRIANNDQEAIEGFKL 154 (246)
Q Consensus 109 ~~~~~~~~~~~~~~~~P~vvKp~~g~g~~------gv~~v~~~~el~~~~~~ 154 (246)
-.+..++ ..++..|.+.|.--..|.+.. |...+.+++++.+.+++
T Consensus 164 gDs~~Di-~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~e 214 (216)
T 3kbb_A 164 EDSKSGV-EAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLKE 214 (216)
T ss_dssp ECSHHHH-HHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHHH
T ss_pred ecCHHHH-HHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHHH
Confidence 2455554 356778888764323332211 22233456666555544
No 196
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=33.81 E-value=1.3e+02 Score=21.99 Aligned_cols=117 Identities=13% Similarity=0.038 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNG 107 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 107 (246)
.....+++.+++.++..++.+.+ ........++..|+. .+..+...-....+....+.+++++|++.-..+ .
T Consensus 107 ~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i-~ 182 (237)
T 4ex6_A 107 PGVLEGLDRLSAAGFRLAMATSK---VEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCV-V 182 (237)
T ss_dssp TTHHHHHHHHHHTTEEEEEECSS---CHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEE-E
T ss_pred CCHHHHHHHHHhCCCcEEEEcCC---ChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeE-E
Confidence 34567777788777776664431 112334455555541 111111111112344677888999999754432 1
Q ss_pred ccCCHHHHHHHHHHhCCcEEEEeccCCCC-------ceeEEeCCHHHHHHHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPVMIKASAGGGG-------KGMRIANNDQEAIEGFKL 154 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~vvKp~~g~g~-------~gv~~v~~~~el~~~~~~ 154 (246)
+-++..++. .++..|.+.+.=.. +.+. ..-+++.+.+|+.+.+..
T Consensus 183 vGD~~~Di~-~a~~aG~~~i~v~~-g~~~~~~~~~~~ad~v~~~~~el~~~l~~ 234 (237)
T 4ex6_A 183 IGDGVPDAE-MGRAAGMTVIGVSY-GVSGPDELMRAGADTVVDSFPAAVTAVLD 234 (237)
T ss_dssp EESSHHHHH-HHHHTTCEEEEESS-SSSCHHHHHHTTCSEEESSHHHHHHHHHH
T ss_pred EcCCHHHHH-HHHHCCCeEEEEec-CCCCHHHHHhcCCCEEECCHHHHHHHHHc
Confidence 334555544 56678887654332 2211 234567888888777654
No 197
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=33.56 E-value=93 Score=24.33 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=56.3
Q ss_pred HHHHHHHHHhCCCEEcccc--------ccC--CCC--HHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCC
Q psy10619 35 DKIIDAIRQTRADAVHPGY--------GFL--SEN--ASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNII 102 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~~--------~~~--~e~--~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p 102 (246)
-.+++.+++.+.|+|.-.. ++. .+. ..+.+.+++.|++++... .|... -+++.++ ++.-
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~-------~d~~~-~~~l~~~-vd~~ 110 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEV-------MDTRH-VELVAKY-SDIL 110 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC-------CCGGG-HHHHHHH-CSEE
T ss_pred HHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEee-------CCHHh-HHHHHhh-CCEE
Confidence 3455566778899886442 110 011 145667788888887322 33332 3344454 4432
Q ss_pred CCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHH
Q psy10619 103 PGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSS 156 (246)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~ 156 (246)
+=-.+.+.+..-+.+ +.+.+.|+++|--.. .+.+++..+++.+.
T Consensus 111 kIga~~~~n~~ll~~-~a~~~kPV~lk~G~~---------~t~~e~~~Av~~i~ 154 (262)
T 1zco_A 111 QIGARNSQNFELLKE-VGKVENPVLLKRGMG---------NTIQELLYSAEYIM 154 (262)
T ss_dssp EECGGGTTCHHHHHH-HTTSSSCEEEECCTT---------CCHHHHHHHHHHHH
T ss_pred EECcccccCHHHHHH-HHhcCCcEEEecCCC---------CCHHHHHHHHHHHH
Confidence 100124555554444 445889999973221 16788888887664
No 198
>1zau_A DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacterium tuberculosis}
Probab=33.26 E-value=66 Score=26.22 Aligned_cols=35 Identities=9% Similarity=-0.073 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHh
Q psy10619 87 KLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDI 122 (246)
Q Consensus 87 K~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~ 122 (246)
.....++|++.|+++.+.. ..+.+.+++.++.+.+
T Consensus 249 ~~e~l~~L~~~Gf~v~~~~-~~~~~~~ev~~~~~~~ 283 (328)
T 1zau_A 249 LHQAYLALRAWGLPVSEHT-TLATDLAGVRERIDYW 283 (328)
T ss_dssp HHHHHHHHHTTTCCCCCCC-CCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCCce-EEeCCHHHHHHHHHHH
Confidence 4455666777777776542 3566677776666554
No 199
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=32.26 E-value=1.3e+02 Score=21.44 Aligned_cols=40 Identities=5% Similarity=-0.017 Sum_probs=25.2
Q ss_pred HHHHHHHHHhCCCEEccccc--cCCC-C---HHHHHHHHHcCCeEe
Q psy10619 35 DKIIDAIRQTRADAVHPGYG--FLSE-N---ASFVSRLKEEGVVFI 74 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~~~--~~~e-~---~~~~~~~~~~g~~~~ 74 (246)
..+.+.+++.++|+|+.... .... . ..+.+.+...++|++
T Consensus 72 p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~ 117 (152)
T 1b93_A 72 QQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVA 117 (152)
T ss_dssp HHHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEE
T ss_pred chHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEE
Confidence 46888888888888886654 2111 1 135556666777776
No 200
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=32.01 E-value=1.1e+02 Score=21.10 Aligned_cols=40 Identities=13% Similarity=0.078 Sum_probs=24.3
Q ss_pred HHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCC
Q psy10619 36 KIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPT 77 (246)
Q Consensus 36 ~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~ 77 (246)
.+++-+.+.++..++...+. ....+.+.+++.|++++||+
T Consensus 84 ~v~~~~~~~g~~~i~~~~~~--~~~~l~~~a~~~Gi~~igpn 123 (138)
T 1y81_A 84 QVAKEAVEAGFKKLWFQPGA--ESEEIRRFLEKAGVEYSFGR 123 (138)
T ss_dssp HHHHHHHHTTCCEEEECTTS--CCHHHHHHHHHHTCEEECSC
T ss_pred HHHHHHHHcCCCEEEEcCcc--HHHHHHHHHHHCCCEEEcCC
Confidence 33443445667766655433 34566777777888888765
No 201
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=31.25 E-value=1.4e+02 Score=21.26 Aligned_cols=69 Identities=13% Similarity=0.173 Sum_probs=45.7
Q ss_pred HHHHHHHHHhCCCEEccccccCCCCH-----------HHHHHHHHcCCeEeCCCHHHHHHh------cCHHHHHHHHHHh
Q psy10619 35 DKIIDAIRQTRADAVHPGYGFLSENA-----------SFVSRLKEEGVVFIGPTAECIRGM------GDKLESKKLAKEA 97 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~~~~~~e~~-----------~~~~~~~~~g~~~~g~~~~~~~~~------~dK~~~~~~l~~~ 97 (246)
+.+.++++++++|.+..---|+..+. .+...+.+.|+|+...++..+... -+|.......++.
T Consensus 49 ~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~~vKkavtG~G~A~K~qV~~mv~~l 128 (158)
T 1hjr_A 49 AGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKSQVQHMVRTL 128 (158)
T ss_dssp HHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHHHHHHHTSSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHHHHHHhhCCCCCcHHHHHHHHHHH
Confidence 44677888899998764422333321 233456778999998888777654 5788877776665
Q ss_pred -CCCCCC
Q psy10619 98 -GVNIIP 103 (246)
Q Consensus 98 -gip~p~ 103 (246)
+++.++
T Consensus 129 l~l~~~p 135 (158)
T 1hjr_A 129 LKLPANP 135 (158)
T ss_dssp TTCCCCC
T ss_pred cCCCCCC
Confidence 776554
No 202
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=31.21 E-value=1.3e+02 Score=22.06 Aligned_cols=40 Identities=8% Similarity=0.009 Sum_probs=23.9
Q ss_pred HHHHHHHHHhCCCEEccccc--c-CC--CC-HHHHHHHHHcCCeEe
Q psy10619 35 DKIIDAIRQTRADAVHPGYG--F-LS--EN-ASFVSRLKEEGVVFI 74 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~~~--~-~~--e~-~~~~~~~~~~g~~~~ 74 (246)
..+.+.+++..+|+||.+.. . .+ .+ ..+.+.+...++|++
T Consensus 88 pqI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~ 133 (178)
T 1vmd_A 88 QQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVA 133 (178)
T ss_dssp HHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEE
T ss_pred chHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEE
Confidence 46778888888888876654 1 11 11 145555566666666
No 203
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=30.85 E-value=1.1e+02 Score=22.36 Aligned_cols=110 Identities=8% Similarity=-0.044 Sum_probs=55.7
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCC----eEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGV----VFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNG 107 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~----~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 107 (246)
.....+++.+++.++...+.+.+ .. ....++..|+ ..+..+...-..-.+...+..+++++|++.-..+ .
T Consensus 95 ~~~~~~l~~l~~~g~~~~i~t~~---~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i-~ 168 (233)
T 3nas_A 95 PGIGRLLCQLKNENIKIGLASSS---RN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCA-A 168 (233)
T ss_dssp TTHHHHHHHHHHTTCEEEECCSC---TT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEE-E
T ss_pred cCHHHHHHHHHHCCCcEEEEcCc---hh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEE-E
Confidence 45677788888888877765532 11 4456666664 2222232222222334467888999998754432 1
Q ss_pred ccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEA 148 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el 148 (246)
+-++..++. .++..|.+++.-.....-...-.++.+.+|+
T Consensus 169 vGDs~~Di~-~a~~aG~~~~~~~~~~~~~~ad~v~~s~~el 208 (233)
T 3nas_A 169 IEDAEAGIS-AIKSAGMFAVGVGQGQPMLGADLVVRQTSDL 208 (233)
T ss_dssp EECSHHHHH-HHHHTTCEEEECC-------CSEECSSGGGC
T ss_pred EeCCHHHHH-HHHHcCCEEEEECCccccccCCEEeCChHhC
Confidence 234555544 5667888766653322211223455665554
No 204
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=30.49 E-value=25 Score=26.19 Aligned_cols=20 Identities=15% Similarity=0.212 Sum_probs=17.5
Q ss_pred eeeeecCCCeeeCCCeEEEE
Q psy10619 224 KSVNCKVGDQIMEGQELCVV 243 (246)
Q Consensus 224 ~~l~~~~G~~v~~g~~~~v~ 243 (246)
..|.++.|+.|++||.|+-.
T Consensus 62 a~L~V~dG~~V~~G~~laew 81 (190)
T 2auk_A 62 AVLAKGDGEQVAGGETVANW 81 (190)
T ss_dssp CEESSCTTCEECTTCEEEEC
T ss_pred CEEEecCCCEEcCCCEEEEE
Confidence 56899999999999999863
No 205
>4glw_A DNA ligase; inhibitor, ligase-ligase inhibitor complex; HET: DNA 0XT NMN; 2.00A {Streptococcus pneumoniae}
Probab=29.81 E-value=92 Score=25.04 Aligned_cols=33 Identities=12% Similarity=0.136 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHH
Q psy10619 87 KLESKKLAKEAGVNIIPGFNGIIRDADHCVEIAR 120 (246)
Q Consensus 87 K~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~ 120 (246)
.....++|++.|+++.+.. ..+.+.+++.++.+
T Consensus 227 ~~e~l~~L~~~Gf~~~~~~-~~~~~~~ev~~~~~ 259 (305)
T 4glw_A 227 QEKGLKYLEQLGFVVNPKR-ILAENIDEIWNFIQ 259 (305)
T ss_dssp HHHHHHHHHHHTCCCCCCC-EEESSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCccCCce-EEeCCHHHHHHHHH
Confidence 3445666777777776653 35667776665544
No 206
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=29.58 E-value=66 Score=21.51 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=26.3
Q ss_pred HHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeC
Q psy10619 36 KIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIG 75 (246)
Q Consensus 36 ~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g 75 (246)
.+.+++.+.++|+|+.+- --....+.|.+.|+.++.
T Consensus 54 ~~~~~L~~~gv~~vi~~~----iG~~a~~~L~~~GI~v~~ 89 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTYG----IGRRAIEYFNSLGISVVT 89 (121)
T ss_dssp HHHHHHHHTTCCEEECSB----CCHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHcCCCEEEECC----CCHhHHHHHHHCCCEEEE
Confidence 677778888999988663 223456788888888774
No 207
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=29.21 E-value=1e+02 Score=22.72 Aligned_cols=118 Identities=9% Similarity=0.031 Sum_probs=61.9
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe------EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV------FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGF 105 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~------~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~ 105 (246)
.....+++.+++.++...+.+.+ ........++. |+. .+..+...-..-.+...++.+++++|++.-..+
T Consensus 112 ~~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i 187 (243)
T 3qxg_A 112 PGAWELLQKVKSEGLTPMVVTGS---GQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAV 187 (243)
T ss_dssp TTHHHHHHHHHHTTCEEEEECCC---CCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCHHHHHHHHHHcCCcEEEEeCC---cHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 45567778888887777665531 11222233333 331 010111111122344668889999998754433
Q ss_pred ccccCCHHHHHHHHHHhCCcEEEEeccCCCC------ceeEEeCCHHHHHHHHHHH
Q psy10619 106 NGIIRDADHCVEIARDIGYPVMIKASAGGGG------KGMRIANNDQEAIEGFKLS 155 (246)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~------~gv~~v~~~~el~~~~~~~ 155 (246)
.+-++..++ ..++..|.+++.=....... .--.++.+.+|+.+.+..+
T Consensus 188 -~vGD~~~Di-~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l~~l 241 (243)
T 3qxg_A 188 -VIENAPLGV-EAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSWDTI 241 (243)
T ss_dssp -EEECSHHHH-HHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHHHHH
T ss_pred -EEeCCHHHH-HHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHHHhh
Confidence 123455454 45677888755432211111 1235678889988877653
No 208
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=28.94 E-value=67 Score=22.24 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=25.9
Q ss_pred HHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeC
Q psy10619 36 KIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIG 75 (246)
Q Consensus 36 ~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g 75 (246)
.+.+++.+.++|+|+.+- --....+.|.+.|+.++.
T Consensus 67 ~~a~~L~~~gv~vVI~g~----IG~~a~~~L~~~GI~v~~ 102 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVRG----IGRRAIAAFEAMGVKVIK 102 (136)
T ss_dssp CHHHHHHHTTCSEEECSC----CCHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHCCCCEEEECC----CCHHHHHHHHHCCCEEEe
Confidence 567777888899988663 224556778888888774
No 209
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=28.86 E-value=64 Score=26.57 Aligned_cols=77 Identities=18% Similarity=0.126 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeE
Q psy10619 61 SFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMR 140 (246)
Q Consensus 61 ~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~ 140 (246)
.+.+.+++.|++++... .|.. .-++|.++|++.-+--++...+..-+ +.+.+.|-|+++|- |+
T Consensus 82 ~L~~~~~~~Gi~~~st~-------fD~~-svd~l~~~~v~~~KI~S~~~~N~pLL-~~va~~gKPviLst-------Gm- 144 (350)
T 3g8r_A 82 KLVAEMKANGFKAICTP-------FDEE-SVDLIEAHGIEIIKIASCSFTDWPLL-ERIARSDKPVVAST-------AG- 144 (350)
T ss_dssp HHHHHHHHTTCEEEEEE-------CSHH-HHHHHHHTTCCEEEECSSSTTCHHHH-HHHHTSCSCEEEEC-------TT-
T ss_pred HHHHHHHHcCCcEEecc-------CCHH-HHHHHHHcCCCEEEECcccccCHHHH-HHHHhhCCcEEEEC-------CC-
Confidence 35566777888777433 2322 23456666666533112234555433 34445677777763 22
Q ss_pred EeCCHHHHHHHHHHHH
Q psy10619 141 IANNDQEAIEGFKLSS 156 (246)
Q Consensus 141 ~v~~~~el~~~~~~~~ 156 (246)
.+.+|+..+++.+.
T Consensus 145 --stl~Ei~~Ave~i~ 158 (350)
T 3g8r_A 145 --ARREDIDKVVSFML 158 (350)
T ss_dssp --CCHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHH
Confidence 24555555555443
No 210
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=28.15 E-value=1.6e+02 Score=20.92 Aligned_cols=124 Identities=10% Similarity=0.016 Sum_probs=69.3
Q ss_pred CCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe-----EeCCCHHH---HHHhcCHHHHHHHHHHhCCCCC
Q psy10619 31 YINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV-----FIGPTAEC---IRGMGDKLESKKLAKEAGVNII 102 (246)
Q Consensus 31 ~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~-----~~g~~~~~---~~~~~dK~~~~~~l~~~gip~p 102 (246)
+.....+++.+++.++...+.+.........+...++..|+. +++..... -..--+...+...++++|++.-
T Consensus 36 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 115 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKT 115 (189)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGG
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcc
Confidence 345678888999988888776642211113556678888862 22222100 0112355678888999998644
Q ss_pred CCCccccCCH--HHHHHHHHHhCCcEEEEeccCCCC--------ceeEEeC--CHHHHHHHHHHHHH
Q psy10619 103 PGFNGIIRDA--DHCVEIARDIGYPVMIKASAGGGG--------KGMRIAN--NDQEAIEGFKLSSQ 157 (246)
Q Consensus 103 ~~~~~~~~~~--~~~~~~~~~~~~P~vvKp~~g~g~--------~gv~~v~--~~~el~~~~~~~~~ 157 (246)
... .+.+. .++ ..++..|.+.+.=...+... ..-.++. +..++.+.+.....
T Consensus 116 ~~l--~VGD~~~~Di-~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~~ 179 (189)
T 3ib6_A 116 EAV--MVGNTFESDI-IGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKK 179 (189)
T ss_dssp GEE--EEESBTTTTH-HHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHHH
T ss_pred cEE--EECCCcHHHH-HHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHHH
Confidence 432 33332 344 35667888765533322210 1223345 88888887766543
No 211
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=28.09 E-value=1.4e+02 Score=23.66 Aligned_cols=40 Identities=18% Similarity=0.055 Sum_probs=25.1
Q ss_pred ccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQ 157 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~ 157 (246)
.+++.+ +...+.+.+.|+++|--..+ +.+|+..+.+.+..
T Consensus 115 ~~~n~~-ll~~~a~~~kPV~lk~G~~~---------t~~e~~~A~~~i~~ 154 (280)
T 2qkf_A 115 LARQTD-LVVAMAKTGNVVNIKKPQFL---------SPSQMKNIVEKFHE 154 (280)
T ss_dssp GTTBHH-HHHHHHHTCCEEEEECCTTS---------CGGGHHHHHHHHHH
T ss_pred cccCHH-HHHHHHcCCCcEEEECCCCC---------CHHHHHHHHHHHHH
Confidence 345666 44445678999999854432 45677777766543
No 212
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=27.76 E-value=40 Score=24.50 Aligned_cols=31 Identities=19% Similarity=0.365 Sum_probs=28.0
Q ss_pred cceeccccceeeeeeecCCCeeeCCCeEEEE
Q psy10619 213 KILHAPMPGLVKSVNCKVGDQIMEGQELCVV 243 (246)
Q Consensus 213 ~~l~sp~pg~i~~l~~~~G~~v~~g~~~~v~ 243 (246)
....-|+-|....+-+..|++|.+|+.++-|
T Consensus 101 ~L~lvpaeG~~V~~i~~~G~rV~kgd~lA~i 131 (169)
T 3d4r_A 101 KLISVPAEGYKVYPIMDFGFRVLKGYRLATL 131 (169)
T ss_dssp BCEEEEECSSEEEECCCCSEEECTTCEEEEE
T ss_pred EEEEEEeCceEEEEEcCcCcEeccCCeEEEE
Confidence 5677899999999999999999999999866
No 213
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=27.75 E-value=81 Score=25.16 Aligned_cols=41 Identities=17% Similarity=0.163 Sum_probs=26.9
Q ss_pred ccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQE 158 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~ 158 (246)
.+++.+-+ ..+.+.+.|+++|--.. -+.+|+..+++.+...
T Consensus 117 ~~~n~~LL-r~~a~~gkPVilK~G~~---------~t~~e~~~ave~i~~~ 157 (288)
T 3tml_A 117 LCRQTDFI-HACARSGKPVNIKKGQF---------LAPHDMKNVIDKARDA 157 (288)
T ss_dssp GTTCHHHH-HHHHTSSSCEEEECCTT---------CCTTHHHHHHHHHHHH
T ss_pred cccCHHHH-HHHHccCCcEEEeCCCC---------CCHHHHHHHHHHHHHc
Confidence 34566643 34567888999885332 2678888888887653
No 214
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=27.66 E-value=2.5e+02 Score=22.98 Aligned_cols=103 Identities=13% Similarity=0.075 Sum_probs=56.4
Q ss_pred HHHHHHHHhCCCEEcccc--------ccC--CCC--HHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCC
Q psy10619 36 KIIDAIRQTRADAVHPGY--------GFL--SEN--ASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIP 103 (246)
Q Consensus 36 ~l~~~~~~~~~d~v~~~~--------~~~--~e~--~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~ 103 (246)
.+++.+++.+.|++-... ++. .+. ..+.+.+++.|++++... .|.... +++.++ ++.-.
T Consensus 124 ~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~te~-------~d~~~~-~~l~~~-vd~lk 194 (350)
T 1vr6_A 124 ETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEA-------LGEDDL-PKVAEY-ADIIQ 194 (350)
T ss_dssp HHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC-------SSGGGH-HHHHHH-CSEEE
T ss_pred HHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEEEEe-------CCHHHH-HHHHHh-CCEEE
Confidence 445556668888875331 111 111 145667788888887332 233222 334444 43311
Q ss_pred CCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHH
Q psy10619 104 GFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQ 157 (246)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~ 157 (246)
--.+.+.+.+-+.+ +.+.+.|+++|--.. .+.+|+..+++.+..
T Consensus 195 IgAr~~~n~~LL~~-va~~~kPVilk~G~~---------~tl~ei~~Ave~i~~ 238 (350)
T 1vr6_A 195 IGARNAQNFRLLSK-AGSYNKPVLLKRGFM---------NTIEEFLLSAEYIAN 238 (350)
T ss_dssp ECGGGTTCHHHHHH-HHTTCSCEEEECCTT---------CCHHHHHHHHHHHHH
T ss_pred ECcccccCHHHHHH-HHccCCcEEEcCCCC---------CCHHHHHHHHHHHHH
Confidence 00124566655544 447889999985332 267888888887754
No 215
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=27.34 E-value=1.7e+02 Score=22.34 Aligned_cols=61 Identities=13% Similarity=0.125 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHH-----hCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCC
Q psy10619 32 INVDKIIDAIRQ-----TRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNI 101 (246)
Q Consensus 32 ~~~~~l~~~~~~-----~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~ 101 (246)
.+.+.+.+++++ .++|+|+.++-.+.-...+.+.-+..|+|++ .+. .....+.++.+|++.
T Consensus 162 ~~~~~~~~~~~~~l~~~~~adaivL~CT~l~~l~~i~~le~~lg~PVi-ds~--------~a~~w~~lr~~g~~~ 227 (240)
T 3ixl_A 162 VDTATLVDLCVRAFEAAPDSDGILLSSGGLLTLDAIPEVERRLGVPVV-SSS--------PAGFWDAVRLAGGGA 227 (240)
T ss_dssp CCHHHHHHHHHHHHHTSTTCSEEEEECTTSCCTTHHHHHHHHHSSCEE-EHH--------HHHHHHHHHHTTSCC
T ss_pred CCHHHHHHHHHHHhhcCCCCCEEEEeCCCCchhhhHHHHHHHhCCCEE-eHH--------HHHHHHHHHHcCCCC
Confidence 345666666655 3688998886443322222334455789987 222 234667788888875
No 216
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=27.27 E-value=1.9e+02 Score=24.79 Aligned_cols=68 Identities=13% Similarity=0.181 Sum_probs=43.0
Q ss_pred HHHHHHHHHhCCCEEccccccCCCCH--HHHHHHHH--cCCeEeCCCHH--HHHHhcCHHHHHHHHHHhCCCCCC
Q psy10619 35 DKIIDAIRQTRADAVHPGYGFLSENA--SFVSRLKE--EGVVFIGPTAE--CIRGMGDKLESKKLAKEAGVNIIP 103 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~~~~~~e~~--~~~~~~~~--~g~~~~g~~~~--~~~~~~dK~~~~~~l~~~gip~p~ 103 (246)
..+.+++++.+++.|..++-.. .+. .+...+.. .+++++-|-.+ .+..+.+|...+++++++|||.+.
T Consensus 111 ~~l~e~A~e~Gad~IAtGht~k-gnDq~rf~~~~~al~p~l~viaPlr~~~ll~~~lsK~EI~~yA~~~GIp~~~ 184 (455)
T 1k92_A 111 TMLVAAMKEDGVNIWGDGSTYK-GNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKM 184 (455)
T ss_dssp HHHHHHHHHTTCCEEECCCCTT-SSHHHHHHHHHHHHCTTCEEECGGGCHHHHHHSSSHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCCEEEECCcCC-CCCHHHHHHHHHhcCCCCEEECeeccccccccCCCHHHHHHHHHHcCCCccc
Confidence 4578889999999998776211 122 22222222 25766633322 112236899999999999999874
No 217
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=27.27 E-value=1.8e+02 Score=21.19 Aligned_cols=117 Identities=9% Similarity=-0.049 Sum_probs=64.1
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeC-CCHHHH-HHhcCHHHHHHHHHHhCCCCCCCCcccc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIG-PTAECI-RGMGDKLESKKLAKEAGVNIIPGFNGII 109 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g-~~~~~~-~~~~dK~~~~~~l~~~gip~p~~~~~~~ 109 (246)
.....+++.+++. +...+.+. .........++..|+.+-. .+.+.. ..-.+...++.+++++|++.-..+ .+-
T Consensus 119 ~~~~~~l~~l~~~-~~~~i~t~---~~~~~~~~~l~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~-~iG 193 (254)
T 3umg_A 119 PDSVPGLTAIKAE-YIIGPLSN---GNTSLLLDMAKNAGIPWDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVM-LAA 193 (254)
T ss_dssp TTHHHHHHHHHHH-SEEEECSS---SCHHHHHHHHHHHTCCCSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEE-EEE
T ss_pred cCHHHHHHHHHhC-CeEEEEeC---CCHHHHHHHHHhCCCCeeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEE-EEe
Confidence 3456666666665 55555432 1112344556666764110 112222 222345678888999999754432 123
Q ss_pred CCHHHHHHHHHHhCCcEEEEeccCC-----------CCceeEEeCCHHHHHHHHHH
Q psy10619 110 RDADHCVEIARDIGYPVMIKASAGG-----------GGKGMRIANNDQEAIEGFKL 154 (246)
Q Consensus 110 ~~~~~~~~~~~~~~~P~vvKp~~g~-----------g~~gv~~v~~~~el~~~~~~ 154 (246)
++..++. .++..|..++.-...+. ...--+++++..|+.+.+..
T Consensus 194 D~~~Di~-~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 194 AHNGDLE-AAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp SCHHHHH-HHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred CChHhHH-HHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 4555544 46778988766654321 11223678999999887754
No 218
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=27.02 E-value=97 Score=21.56 Aligned_cols=46 Identities=11% Similarity=0.006 Sum_probs=28.5
Q ss_pred HHHHHHHHHhCCCEEccccc--c-CC---CCHHHHHHHHHcCCeEeCCCHHHH
Q psy10619 35 DKIIDAIRQTRADAVHPGYG--F-LS---ENASFVSRLKEEGVVFIGPTAECI 81 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~~~~~--~-~~---e~~~~~~~~~~~g~~~~g~~~~~~ 81 (246)
..+.+.+++.++|+|+.+.. . .+ ....+.+.+...++|++ .+.+++
T Consensus 64 p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~-T~latA 115 (134)
T 2xw6_A 64 QQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLA-TNPMAA 115 (134)
T ss_dssp HHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEE-CSHHHH
T ss_pred chHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeE-cCHHHH
Confidence 46888888888888876654 1 11 11256666667777777 444443
No 219
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=26.80 E-value=63 Score=23.04 Aligned_cols=113 Identities=9% Similarity=0.009 Sum_probs=58.6
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNG 107 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 107 (246)
.....+++.+++.++..++.+.+ ........++..|+. .+-.+...-..-.+...++.+++++|++.-..+ .
T Consensus 92 ~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~-~ 167 (214)
T 3e58_A 92 PDVLKVLNEVKSQGLEIGLASSS---VKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL-I 167 (214)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEE-E
T ss_pred chHHHHHHHHHHCCCCEEEEeCC---cHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCChHHeE-E
Confidence 34567777778877777665531 112344556666652 110111111111234567888999998754433 1
Q ss_pred ccCCHHHHHHHHHHhCCcEEEEeccCC---CCceeEEeCCHHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPVMIKASAGG---GGKGMRIANNDQEAI 149 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~vvKp~~g~---g~~gv~~v~~~~el~ 149 (246)
.-++..++ ..++..|.+++.-...+. ....-.++++..|+.
T Consensus 168 iGD~~~Di-~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~ 211 (214)
T 3e58_A 168 IEDSEKGI-AAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVL 211 (214)
T ss_dssp EECSHHHH-HHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGG
T ss_pred EeccHhhH-HHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHH
Confidence 23444444 456778887666543221 122344566666553
No 220
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=26.80 E-value=27 Score=26.17 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=15.5
Q ss_pred eee--eecCCCeeeCCCeEE
Q psy10619 224 KSV--NCKVGDQIMEGQELC 241 (246)
Q Consensus 224 ~~l--~~~~G~~v~~g~~~~ 241 (246)
..+ .|+.||.|++||.|+
T Consensus 138 k~i~~~V~eGd~V~~Ge~L~ 157 (193)
T 2xha_A 138 VFDRDRIKKGKEVKQGEMLA 157 (193)
T ss_dssp GCCTTTSCTTCEECTTCEEE
T ss_pred CccccccCCCCEECCCCCcc
Confidence 456 899999999999986
No 221
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=26.73 E-value=1.8e+02 Score=23.06 Aligned_cols=72 Identities=15% Similarity=0.225 Sum_probs=46.8
Q ss_pred CCCCHHHHHHHHHHhCCCEEccccccC--CCCHHHHHHHHHcC-CeEeCCC------------HHHHHHhcCHHHHHHHH
Q psy10619 30 SYINVDKIIDAIRQTRADAVHPGYGFL--SENASFVSRLKEEG-VVFIGPT------------AECIRGMGDKLESKKLA 94 (246)
Q Consensus 30 ~~~~~~~l~~~~~~~~~d~v~~~~~~~--~e~~~~~~~~~~~g-~~~~g~~------------~~~~~~~~dK~~~~~~l 94 (246)
++.+.+.+.+++++.++|+|+...+.. .....+.+.+.+.| ++.+-++ .........|....+++
T Consensus 68 Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l 147 (346)
T 3i6i_A 68 LINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLV 147 (346)
T ss_dssp CTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHHH
Confidence 456788999999988899998665421 11135667777777 6443221 11223445688888899
Q ss_pred HHhCCCC
Q psy10619 95 KEAGVNI 101 (246)
Q Consensus 95 ~~~gip~ 101 (246)
++.|++.
T Consensus 148 ~~~g~~~ 154 (346)
T 3i6i_A 148 EESGIPF 154 (346)
T ss_dssp HHTTCCB
T ss_pred HHcCCCE
Confidence 9888875
No 222
>3kal_A Homoglutathione synthetase; dimer, ATP-grAsp domain; HET: ADP HGS; 1.90A {Glycine max} PDB: 3kak_A* 3kaj_A*
Probab=26.46 E-value=81 Score=27.33 Aligned_cols=45 Identities=18% Similarity=0.248 Sum_probs=28.8
Q ss_pred cEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEeccc
Q psy10619 125 PVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIK 175 (246)
Q Consensus 125 P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~ 175 (246)
-+|+||...+||..++ .+++...++.+....... -..+++++.|.
T Consensus 384 ~~VLKPQREGGGNNiY----g~dI~~~L~~l~~~~~~e--~~ayILMerI~ 428 (499)
T 3kal_A 384 LFVMKPQREGGGNNIY----GDELRETLLKLQEAGSQE--DAAYILMQRIF 428 (499)
T ss_dssp GEEEECSCCSSSCCBC----HHHHHHHHHHCCC-------GGGCEEEECCC
T ss_pred HeeecccccCCccccc----hHHHHHHHHhcCccchhh--HHHHHHHhhcC
Confidence 3899999999998884 467777777653210001 13567777775
No 223
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=26.05 E-value=70 Score=26.82 Aligned_cols=61 Identities=15% Similarity=0.079 Sum_probs=38.0
Q ss_pred HhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCC
Q psy10619 43 QTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPG 104 (246)
Q Consensus 43 ~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~ 104 (246)
+.++.+|=....+....+.+.+.+++.|+|+.|.+..+=.. .=|.....+|.+.|+.+-.+
T Consensus 186 ~aG~~fvN~~P~~ia~~P~~~ela~~~gvpi~GdD~ktG~T-~~k~~L~~~l~~rgl~v~~~ 246 (394)
T 3cin_A 186 RGGAAFVNVIPTFIANDPAFVELAKENNLVVFGDDGATGAT-PFTADVLSHLAQRNRYVKDV 246 (394)
T ss_dssp HTCEEEEECSSSCSTTCHHHHHHHHHTTEEEECSSBSCSHH-HHHHHHHHHHHHTTCEEEEE
T ss_pred hcCCceecCCCccccCcHHHHHHHHHcCCcEecccccccch-hHHHHHHHHHHHCCCeEeEE
Confidence 55666664344444456778888888888888877433211 12555667777777776554
No 224
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=25.69 E-value=56 Score=26.04 Aligned_cols=25 Identities=16% Similarity=0.215 Sum_probs=20.6
Q ss_pred cceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 220 PGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 220 pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
|++-....++-|+.|++||+|+.+|
T Consensus 69 ~~~~v~~~~~dG~~v~~g~~v~~i~ 93 (284)
T 1qpo_A 69 NGYRVLDRVEDGARVPPGEALMTLE 93 (284)
T ss_dssp TSEEEEEECCTTCEECTTCEEEEEE
T ss_pred CCEEEEEEcCCCCEecCCcEEEEEE
Confidence 3545566899999999999999886
No 225
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=25.43 E-value=1.9e+02 Score=23.15 Aligned_cols=90 Identities=19% Similarity=0.254 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhCCCEEccccccCCCC--------HHHHHHHH---HcCCeEe-CCCHHHHHHhcCHHHHHHHHHHhCCC-
Q psy10619 34 VDKIIDAIRQTRADAVHPGYGFLSEN--------ASFVSRLK---EEGVVFI-GPTAECIRGMGDKLESKKLAKEAGVN- 100 (246)
Q Consensus 34 ~~~l~~~~~~~~~d~v~~~~~~~~e~--------~~~~~~~~---~~g~~~~-g~~~~~~~~~~dK~~~~~~l~~~gip- 100 (246)
...+++..-+.++|.+++. |..+|. ..+.+... ...+|++ |.+. ... +=....+.+++.|..
T Consensus 35 l~~lv~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st~---~ai~la~~A~~~Gada 109 (314)
T 3d0c_A 35 LDDNVEFLLQNGIEVIVPN-GNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-SVD---TAIELGKSAIDSGADC 109 (314)
T ss_dssp HHHHHHHHHHTTCSEECTT-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHH---HHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHcCCCEEEEC-cccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CHH---HHHHHHHHHHHcCCCE
Confidence 3455556667899998855 221222 12323222 2246665 3322 111 122344556777765
Q ss_pred ---CCCCCccccCCHHHHHHHHH----HhCCcEEEEe
Q psy10619 101 ---IIPGFNGIIRDADHCVEIAR----DIGYPVMIKA 130 (246)
Q Consensus 101 ---~p~~~~~~~~~~~~~~~~~~----~~~~P~vvKp 130 (246)
+||+|. -.+.+++.++.+ ..+.|+++=-
T Consensus 110 vlv~~P~y~--~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 110 VMIHQPVHP--YITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp EEECCCCCS--CCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred EEECCCCCC--CCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 466653 346777765543 4578988854
No 226
>2hgs_A Protein (glutathione synthetase); amine/carboxylate ligase; HET: ADP GSH; 2.10A {Homo sapiens} SCOP: c.30.1.4 d.142.1.6
Probab=25.15 E-value=2.1e+02 Score=24.64 Aligned_cols=56 Identities=16% Similarity=0.226 Sum_probs=34.5
Q ss_pred cEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCceEEEecccCcceEEEEeeecce
Q psy10619 125 PVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDRILVEKFIKNPRHIEIQGTTYKF 189 (246)
Q Consensus 125 P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lve~~i~~g~e~~v~v~~d~~ 189 (246)
-.|+||...+||..++ .+++.+.++.+... . .-..+++++.|. .....--+++++.
T Consensus 360 ~~VLKPQREGGGNNiY----g~dI~~~L~~l~~~---e-~~~ayILMerI~-Pp~~~~~~vR~g~ 415 (474)
T 2hgs_A 360 RFVLKPQREGGGNNLY----GEEMVQALKQLKDS---E-ERASYILMEKIE-PEPFENCLLRPGS 415 (474)
T ss_dssp GEEEEESCCSSSCCBC----HHHHHHHHHHHTTS---G-GGGGEEEEECCC-CCCEEEEEECTTS
T ss_pred heeecCcccCCccccc----hHHHHHHHHhcCCc---c-cceeeeeeeccc-CCCCCeEEEECCc
Confidence 5899999999998874 46777777766321 1 013577777776 3333333444443
No 227
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=24.79 E-value=86 Score=25.80 Aligned_cols=109 Identities=14% Similarity=0.218 Sum_probs=65.9
Q ss_pred CCCCHHHHHHHHHHhCCCEEccc----------cc--cC-----------------CCC--HHHHHHHHHcCCeEeCCCH
Q psy10619 30 SYINVDKIIDAIRQTRADAVHPG----------YG--FL-----------------SEN--ASFVSRLKEEGVVFIGPTA 78 (246)
Q Consensus 30 ~~~~~~~l~~~~~~~~~d~v~~~----------~~--~~-----------------~e~--~~~~~~~~~~g~~~~g~~~ 78 (246)
+......+++.+++.+.|+|=-. +. +. ++. ..+.+.+++.|++++...
T Consensus 33 s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~- 111 (349)
T 2wqp_A 33 SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTL- 111 (349)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEE-
T ss_pred CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEee-
Confidence 34444577788889999988422 11 11 111 155677788888887433
Q ss_pred HHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHH
Q psy10619 79 ECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQ 157 (246)
Q Consensus 79 ~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~ 157 (246)
.|.. .-++|.++|++.-+--++...+..-+ +.+.+.|-|+++| +|+ .+.+|+..+++.+..
T Consensus 112 ------~d~~-svd~l~~~~v~~~KI~S~~~~n~~LL-~~va~~gkPviLs-------tGm---at~~Ei~~Ave~i~~ 172 (349)
T 2wqp_A 112 ------FSRA-AALRLQRMDIPAYKIGSGECNNYPLI-KLVASFGKPIILS-------TGM---NSIESIKKSVEIIRE 172 (349)
T ss_dssp ------CSHH-HHHHHHHHTCSCEEECGGGTTCHHHH-HHHHTTCSCEEEE-------CTT---CCHHHHHHHHHHHHH
T ss_pred ------CCHH-HHHHHHhcCCCEEEECcccccCHHHH-HHHHhcCCeEEEE-------CCC---CCHHHHHHHHHHHHH
Confidence 3333 23557778877644222345666544 4455678899986 344 277888888877764
No 228
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=24.72 E-value=1.1e+02 Score=27.62 Aligned_cols=36 Identities=11% Similarity=0.144 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHh
Q psy10619 86 DKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDI 122 (246)
Q Consensus 86 dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~ 122 (246)
+.....++|++.|+|+++.. ..+.+.+++.++.+.+
T Consensus 238 t~~e~l~~L~~~Gf~v~~~~-~~~~~~~~v~~~~~~~ 273 (671)
T 2owo_A 238 THLGRLLQFKKWGLPVSDRV-TLCESAEEVLAFYHKV 273 (671)
T ss_dssp BHHHHHHHHHHHTCCCCTTC-EEESSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCCcc-eeeCCHHHHHHHHHHH
Confidence 34556677888888887753 4677888877766543
No 229
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=24.58 E-value=2e+02 Score=20.67 Aligned_cols=121 Identities=11% Similarity=-0.028 Sum_probs=64.0
Q ss_pred CCCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCc
Q psy10619 31 YINVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFN 106 (246)
Q Consensus 31 ~~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~ 106 (246)
+.....+++.+++.++...+.+.+...........++..|+. .+-.+...-..-.+...++.+++++|++.-...
T Consensus 101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~- 179 (235)
T 2om6_A 101 LEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESL- 179 (235)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGEE-
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCCCccceE-
Confidence 345677788888877776655431100012334455555542 111111111112355677888999998754432
Q ss_pred ccc-CCH-HHHHHHHHHhCCcEEEEeccCCCC----ceeEEeCCHHHHHHHHHH
Q psy10619 107 GII-RDA-DHCVEIARDIGYPVMIKASAGGGG----KGMRIANNDQEAIEGFKL 154 (246)
Q Consensus 107 ~~~-~~~-~~~~~~~~~~~~P~vvKp~~g~g~----~gv~~v~~~~el~~~~~~ 154 (246)
.+ ++. .++. .++..|.+++.=...+... ..-.++++..|+.+.+..
T Consensus 180 -~iGD~~~nDi~-~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 231 (235)
T 2om6_A 180 -HIGDTYAEDYQ-GARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVIEL 231 (235)
T ss_dssp -EEESCTTTTHH-HHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHHHH
T ss_pred -EECCChHHHHH-HHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHHHH
Confidence 23 344 3443 4567788876633322111 123567888888777654
No 230
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=24.58 E-value=1.8e+02 Score=20.83 Aligned_cols=117 Identities=11% Similarity=0.025 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNG 107 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 107 (246)
.....+++.+++.++...+.+.+ ........++..|+. .+-.+...-..-.+....+.+++++|++.-..+ .
T Consensus 99 ~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~-~ 174 (230)
T 3um9_A 99 ADVPQALQQLRAAGLKTAILSNG---SRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEIL-F 174 (230)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEE-E
T ss_pred CCHHHHHHHHHhCCCeEEEEeCC---CHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEE-E
Confidence 35567777778877776665431 112334455555542 110111111112345667888999998754432 1
Q ss_pred ccCCHHHHHHHHHHhCCcEEEEeccCCCC-----ceeEEeCCHHHHHHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPVMIKASAGGGG-----KGMRIANNDQEAIEGFK 153 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~vvKp~~g~g~-----~gv~~v~~~~el~~~~~ 153 (246)
+-.+..++. .++..|.+++.=...+... ..-.++++..|+.+.+.
T Consensus 175 iGD~~~Di~-~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 224 (230)
T 3um9_A 175 VSCNSWDAT-GAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFS 224 (230)
T ss_dssp EESCHHHHH-HHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTCC
T ss_pred EeCCHHHHH-HHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHHH
Confidence 234554543 4667888876644332211 23356788888866554
No 231
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=24.49 E-value=1.6e+02 Score=21.44 Aligned_cols=120 Identities=8% Similarity=-0.018 Sum_probs=64.9
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe------EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV------FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGF 105 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~------~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~ 105 (246)
.....+++.+++.++...+.+.+.. ......++. |+. .+-.+...-..-.+...++.+++++|++.-..+
T Consensus 111 ~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i 186 (247)
T 3dv9_A 111 PGALEVLTKIKSEGLTPMVVTGSGQ---TSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEAL 186 (247)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSCC------CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred CCHHHHHHHHHHcCCcEEEEcCCch---HHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhheE
Confidence 4567788888888888776553221 112233433 331 011111111122344568889999998755533
Q ss_pred ccccCCHHHHHHHHHHhCCcEEEEec-cCCC-----CceeEEeCCHHHHHHHHHHHHH
Q psy10619 106 NGIIRDADHCVEIARDIGYPVMIKAS-AGGG-----GKGMRIANNDQEAIEGFKLSSQ 157 (246)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~P~vvKp~-~g~g-----~~gv~~v~~~~el~~~~~~~~~ 157 (246)
.+-++..++ ..++..|.+++.=.. .... ..--.++++.+|+.+.+..+..
T Consensus 187 -~vGD~~~Di-~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 242 (247)
T 3dv9_A 187 -VIENAPLGV-QAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETLQS 242 (247)
T ss_dssp -EEECSHHHH-HHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHHHH
T ss_pred -EEeCCHHHH-HHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHHHH
Confidence 123455554 356778887543222 1110 1234678999999988887764
No 232
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=24.47 E-value=61 Score=22.49 Aligned_cols=38 Identities=21% Similarity=0.340 Sum_probs=24.0
Q ss_pred HHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCC
Q psy10619 38 IDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPT 77 (246)
Q Consensus 38 ~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~ 77 (246)
++.+.+.++..++...++ .+..+.+.+++.|++++|+.
T Consensus 87 ~~~~~~~gi~~i~~~~g~--~~~~~~~~a~~~Gir~vgpn 124 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGI--RHPEFEKALKEAGIPVVADR 124 (140)
T ss_dssp HHHHHHHCCSCEEECTTC--CCHHHHHHHHHTTCCEEESC
T ss_pred HHHHHHcCCCEEEEcCCc--CHHHHHHHHHHcCCEEEcCC
Confidence 344445666666544444 34667777888888888765
No 233
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=23.83 E-value=1.3e+02 Score=22.67 Aligned_cols=114 Identities=11% Similarity=0.056 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHhCCCEEccccccC--CCC----HHHHHHHHHcCCeEeCCCHHHHHHhcCHH---HHHHHHHHhCCCCC
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFL--SEN----ASFVSRLKEEGVVFIGPTAECIRGMGDKL---ESKKLAKEAGVNII 102 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~--~e~----~~~~~~~~~~g~~~~g~~~~~~~~~~dK~---~~~~~l~~~gip~p 102 (246)
.+.+..++.+++.+++.|=.....+ ... ..+.+.+++.|+.+........ .+.. ..-++++++|.+..
T Consensus 30 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~---~~~~~~~~~i~~A~~lGa~~v 106 (257)
T 3lmz_A 30 FDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM---KSEEEIDRAFDYAKRVGVKLI 106 (257)
T ss_dssp SCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE---CSHHHHHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc---CCHHHHHHHHHHHHHhCCCEE
Confidence 4789999999999999985443211 111 2667888899987653211100 1112 23445667787764
Q ss_pred CCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHH
Q psy10619 103 PGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFK 153 (246)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~ 153 (246)
.... ......++.+.+++.|..+.+-+....+. .+.+.+++.+.++
T Consensus 107 ~~~p-~~~~l~~l~~~a~~~gv~l~lEn~~~~~~----~~~~~~~~~~ll~ 152 (257)
T 3lmz_A 107 VGVP-NYELLPYVDKKVKEYDFHYAIHLHGPDIK----TYPDATDVWVHTK 152 (257)
T ss_dssp EEEE-CGGGHHHHHHHHHHHTCEEEEECCCTTCS----SSCSHHHHHHHHT
T ss_pred EecC-CHHHHHHHHHHHHHcCCEEEEecCCCccc----ccCCHHHHHHHHH
Confidence 3211 12456677777778888888888752221 3466666655553
No 234
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=23.71 E-value=2e+02 Score=20.84 Aligned_cols=116 Identities=12% Similarity=0.081 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe-----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcc
Q psy10619 33 NVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV-----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNG 107 (246)
Q Consensus 33 ~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~-----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 107 (246)
....+++.+++.++...+.+.. ........++..|+. +++ +...-..-.+....+.+++++|++.-..+ .
T Consensus 99 ~~~~~l~~l~~~g~~~~i~t~~---~~~~~~~~l~~~~l~~~f~~~~~-~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~-~ 173 (232)
T 1zrn_A 99 EVPDSLRELKRRGLKLAILSNG---SPQSIDAVVSHAGLRDGFDHLLS-VDPVQVYKPDNRVYELAEQALGLDRSAIL-F 173 (232)
T ss_dssp THHHHHHHHHHTTCEEEEEESS---CHHHHHHHHHHTTCGGGCSEEEE-SGGGTCCTTSHHHHHHHHHHHTSCGGGEE-E
T ss_pred cHHHHHHHHHHCCCEEEEEeCC---CHHHHHHHHHhcChHhhhheEEE-ecccCCCCCCHHHHHHHHHHcCCCcccEE-E
Confidence 4567777778877776665421 112344556666652 221 11111112344557778899998754432 1
Q ss_pred ccCCHHHHHHHHHHhCCcEEEEeccCCC-----CceeEEeCCHHHHHHHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPVMIKASAGGG-----GKGMRIANNDQEAIEGFKL 154 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~vvKp~~g~g-----~~gv~~v~~~~el~~~~~~ 154 (246)
+-.+..++. .++..|.+++.=...+.. ...-.++++..++.+.+..
T Consensus 174 iGD~~~Di~-~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~ 224 (232)
T 1zrn_A 174 VASNAWDAT-GARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFET 224 (232)
T ss_dssp EESCHHHHH-HHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC--
T ss_pred EeCCHHHHH-HHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHh
Confidence 234554543 466778887663332221 1234567888887665543
No 235
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=23.67 E-value=2.2e+02 Score=21.18 Aligned_cols=118 Identities=12% Similarity=0.068 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNG 107 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 107 (246)
.....+++.+++.++...+.+. +.. ....++..|+. .+..+.+.-..--+...+...++++|++.-....
T Consensus 119 p~~~~ll~~Lk~~g~~i~i~~~---~~~--~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~- 192 (250)
T 4gib_A 119 PGIESLLIDVKSNNIKIGLSSA---SKN--AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIG- 192 (250)
T ss_dssp TTHHHHHHHHHHTTCEEEECCS---CTT--HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEE-
T ss_pred hhHHHHHHHHHhcccccccccc---cch--hhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEE-
Confidence 3456677777777766655432 122 23445555541 1111111111123556778888999986444321
Q ss_pred ccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHH-HHHHHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEA-IEGFKLSS 156 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el-~~~~~~~~ 156 (246)
+=++..++ .++...|.+.|-=+....-..--.++++..|+ .+.+.+.+
T Consensus 193 VGDs~~Di-~aA~~aG~~~i~v~~~~~~~~ad~vi~~l~eL~~~~i~~~~ 241 (250)
T 4gib_A 193 IEDASAGI-DAINSANMFSVGVGNYENLKKANLVVDSTNQLKFEYIQEKY 241 (250)
T ss_dssp EESSHHHH-HHHHHTTCEEEEESCTTTTTTSSEEESSGGGCCHHHHHHHH
T ss_pred ECCCHHHH-HHHHHcCCEEEEECChhHhccCCEEECChHhCCHHHHHHHH
Confidence 22455554 45667787755322222222223567887776 34444433
No 236
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=23.52 E-value=2.2e+02 Score=20.88 Aligned_cols=16 Identities=13% Similarity=0.279 Sum_probs=7.0
Q ss_pred HHHHHHHHHhCCCEEc
Q psy10619 35 DKIIDAIRQTRADAVH 50 (246)
Q Consensus 35 ~~l~~~~~~~~~d~v~ 50 (246)
+..++.+++.++++|+
T Consensus 132 ~~~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 132 TTLISKVKTENIKIVV 147 (196)
T ss_dssp HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHCCCeEEE
Confidence 3344444444444444
No 237
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=23.26 E-value=2e+02 Score=20.87 Aligned_cols=117 Identities=5% Similarity=-0.130 Sum_probs=60.9
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe-----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV-----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFN 106 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~-----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~ 106 (246)
.....+++.+++.++...+.+.+ ........++..|+. +++.. +....-.+......+++++|++.-...
T Consensus 86 ~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~gl~~~f~~i~~~~-~~~~~Kp~~~~~~~~~~~~~~~~~~~~- 160 (222)
T 2nyv_A 86 PEIPYTLEALKSKGFKLAVVSNK---LEELSKKILDILNLSGYFDLIVGGD-TFGEKKPSPTPVLKTLEILGEEPEKAL- 160 (222)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGCSEEECTT-SSCTTCCTTHHHHHHHHHHTCCGGGEE-
T ss_pred CCHHHHHHHHHHCCCeEEEEcCC---CHHHHHHHHHHcCCHHHheEEEecC-cCCCCCCChHHHHHHHHHhCCCchhEE-
Confidence 34566777777777776654431 112344556666642 22211 111111345567788889998644432
Q ss_pred cccCCHHHHHHHHHHhCCcEE-EEeccCCC--CceeEEeCCHHHHHHHHHH
Q psy10619 107 GIIRDADHCVEIARDIGYPVM-IKASAGGG--GKGMRIANNDQEAIEGFKL 154 (246)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~P~v-vKp~~g~g--~~gv~~v~~~~el~~~~~~ 154 (246)
.+-++..++. .++..|.+.+ +....... ...-.++++..++.+.+..
T Consensus 161 ~vGD~~~Di~-~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l~~ 210 (222)
T 2nyv_A 161 IVGDTDADIE-AGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDLVKLMDN 210 (222)
T ss_dssp EEESSHHHHH-HHHHHTCEEEEETTSSCSCCCCCCSEEESSTTHHHHHHHT
T ss_pred EECCCHHHHH-HHHHCCCeEEEEcCCCCCccccCCCEEECCHHHHHHHHHH
Confidence 1234555554 4566788744 43211111 2233567888888766543
No 238
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=23.13 E-value=98 Score=26.41 Aligned_cols=87 Identities=16% Similarity=0.088 Sum_probs=50.1
Q ss_pred HHHHhCCCEEccccccCCCCHHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHH
Q psy10619 40 AIRQTRADAVHPGYGFLSENASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIA 119 (246)
Q Consensus 40 ~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~ 119 (246)
++...++|+|+...+.......+....-+.|..++..+.... ...-..+.++.+++|+..-..........-++.+++
T Consensus 102 LL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~--~~eg~eL~~~A~e~Gvvl~~~~gdqp~~~~eLv~~a 179 (446)
T 3upl_A 102 ILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEAD--VTIGPYLKAQADKQGVIYSLGAGDEPSSCMELIEFV 179 (446)
T ss_dssp HHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHH--HHHHHHHHHHHHHHTCCEEECTTSHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccC--HHHHHHHHHHHHHhCCeeeecCCcchHHHHHHHHHH
Confidence 455667999985532110112445556678998884344322 123346778888999875332100012245677888
Q ss_pred HHhCCcEEE
Q psy10619 120 RDIGYPVMI 128 (246)
Q Consensus 120 ~~~~~P~vv 128 (246)
+..||.+|.
T Consensus 180 ~~~G~~~v~ 188 (446)
T 3upl_A 180 SALGYEVVS 188 (446)
T ss_dssp HHTTCEEEE
T ss_pred HhCCCeEEE
Confidence 889998655
No 239
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=22.89 E-value=40 Score=21.86 Aligned_cols=14 Identities=29% Similarity=0.539 Sum_probs=10.9
Q ss_pred eeeCCCeEEEEccC
Q psy10619 233 QIMEGQELCVVGKT 246 (246)
Q Consensus 233 ~v~~g~~~~v~e~~ 246 (246)
.+++||.|+||+|.
T Consensus 35 ~l~~GdlVAVl~k~ 48 (92)
T 1ug1_A 35 SLLEGDLVGVIKKK 48 (92)
T ss_dssp CCCTTCEEEEEESC
T ss_pred eecCCCEEEEEecC
Confidence 46788888998874
No 240
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=22.71 E-value=1.3e+02 Score=23.83 Aligned_cols=31 Identities=13% Similarity=-0.065 Sum_probs=14.4
Q ss_pred HHhCCCEEccccccCCCCHHHHHHHHHcCCeE
Q psy10619 42 RQTRADAVHPGYGFLSENASFVSRLKEEGVVF 73 (246)
Q Consensus 42 ~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~~ 73 (246)
++..+|+++...-. .........+.+.|++.
T Consensus 61 ~~~~~D~viI~tP~-~~~~~~~~ea~~~Gi~~ 91 (288)
T 2nu8_A 61 AATGATASVIYVPA-PFCKDSILEAIDAGIKL 91 (288)
T ss_dssp HHHCCCEEEECCCG-GGHHHHHHHHHHTTCSE
T ss_pred hcCCCCEEEEecCH-HHHHHHHHHHHHCCCCE
Confidence 34467766544211 01124445555666654
No 241
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=22.41 E-value=2.9e+02 Score=21.74 Aligned_cols=115 Identities=17% Similarity=0.146 Sum_probs=61.8
Q ss_pred HHHHHHHHhCCCEEcccc--------ccC--CCC--HHHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCC
Q psy10619 36 KIIDAIRQTRADAVHPGY--------GFL--SEN--ASFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIP 103 (246)
Q Consensus 36 ~l~~~~~~~~~d~v~~~~--------~~~--~e~--~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~ 103 (246)
.+++.+++.+.|++.... ++. .+. ..+.+.+++.|++++... .|.... +++.++ ++.-.
T Consensus 56 ~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te~-------~d~~~~-~~l~~~-vd~~k 126 (276)
T 1vs1_A 56 EAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEV-------LDPRHV-ETVSRY-ADMLQ 126 (276)
T ss_dssp HHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEEC-------CCGGGH-HHHHHH-CSEEE
T ss_pred HHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEec-------CCHHHH-HHHHHh-CCeEE
Confidence 344555688889875332 111 111 145667778888877332 233222 334444 43311
Q ss_pred CCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeEEeCCHHHHHHHHHHHHHHHHhhcCCCc-eEEEecc
Q psy10619 104 GFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMRIANNDQEAIEGFKLSSQEAAASFGDDR-ILVEKFI 174 (246)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~~v~~~~el~~~~~~~~~~~~~~~~~~~-~lve~~i 174 (246)
--.+.+.+..-+. .+.+.+-|+++|--.. .+.+|+..+++.+.. .++.+ +|+++-+
T Consensus 127 Igs~~~~n~~ll~-~~a~~~kPV~lk~G~~---------~t~~ei~~Ave~i~~-----~Gn~~i~L~~Rg~ 183 (276)
T 1vs1_A 127 IGARNMQNFPLLR-EVGRSGKPVLLKRGFG---------NTVEELLAAAEYILL-----EGNWQVVLVERGI 183 (276)
T ss_dssp ECGGGTTCHHHHH-HHHHHTCCEEEECCTT---------CCHHHHHHHHHHHHH-----TTCCCEEEEECCB
T ss_pred ECcccccCHHHHH-HHHccCCeEEEcCCCC---------CCHHHHHHHHHHHHH-----cCCCeEEEEeCCc
Confidence 0012455655444 4557899999984332 277888888887754 23444 4556454
No 242
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=22.27 E-value=51 Score=24.48 Aligned_cols=22 Identities=27% Similarity=0.317 Sum_probs=18.6
Q ss_pred eeeeecCCCeeeCCCeEEEEcc
Q psy10619 224 KSVNCKVGDQIMEGQELCVVGK 245 (246)
Q Consensus 224 ~~l~~~~G~~v~~g~~~~v~e~ 245 (246)
..+.++.|+.|++||.|+.+-|
T Consensus 166 a~i~v~dG~~V~~GdvLArip~ 187 (190)
T 2auk_A 166 AIVQLEDGVQISSGDTLARIPQ 187 (190)
T ss_dssp CEESSCTTCEECTTCEEEEEEC
T ss_pred CEEEEcCCCEEcCCCEEEEccc
Confidence 3567899999999999998854
No 243
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=22.14 E-value=1.2e+02 Score=18.90 Aligned_cols=45 Identities=13% Similarity=0.226 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHhCCcE----EEEeccCCCCceeEE--eCCHHHHHHHHHH
Q psy10619 110 RDADHCVEIARDIGYPV----MIKASAGGGGKGMRI--ANNDQEAIEGFKL 154 (246)
Q Consensus 110 ~~~~~~~~~~~~~~~P~----vvKp~~g~g~~gv~~--v~~~~el~~~~~~ 154 (246)
.+.+++.++....|.++ +++-...+.++|... ..+.+++..+++.
T Consensus 13 ~te~~l~~~F~~~G~~v~~v~i~~d~~t~~~rg~aFV~F~~~~~A~~Ai~~ 63 (91)
T 2lxi_A 13 ATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEA 63 (91)
T ss_dssp CCHHHHHHHHHHHTCCCSBCCSSSCSSSCCCSSEEEEECSSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCEeEEEEEEecCCCCCcCceEEEEecCHHHHHHHHHh
Confidence 35677777777777432 222223345566544 5788988888754
No 244
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=22.10 E-value=1.6e+02 Score=23.40 Aligned_cols=12 Identities=17% Similarity=0.351 Sum_probs=6.3
Q ss_pred HHHHHHHHHhCC
Q psy10619 88 LESKKLAKEAGV 99 (246)
Q Consensus 88 ~~~~~~l~~~gi 99 (246)
...++.++++|+
T Consensus 112 ~~l~~~A~~~gi 123 (297)
T 2yv2_A 112 MRFVNYARQKGA 123 (297)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 344555555565
No 245
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=21.81 E-value=70 Score=25.72 Aligned_cols=24 Identities=17% Similarity=0.065 Sum_probs=20.1
Q ss_pred ceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 221 GLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 221 g~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
++-....++-|+.|++||+|+.++
T Consensus 83 ~~~v~~~~~dG~~v~~g~~v~~i~ 106 (300)
T 3l0g_A 83 HVKYEIHKKDGDITGKNSTLVSGE 106 (300)
T ss_dssp TEEEEECCCTTCEECSSCEEEEEE
T ss_pred CeEEEEEeCCCCEeeCCCEEEEEE
Confidence 445567889999999999999886
No 246
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=21.71 E-value=44 Score=27.59 Aligned_cols=19 Identities=11% Similarity=0.309 Sum_probs=16.9
Q ss_pred eeeeecCCCeeeCCCeEEE
Q psy10619 224 KSVNCKVGDQIMEGQELCV 242 (246)
Q Consensus 224 ~~l~~~~G~~v~~g~~~~v 242 (246)
..+.++.|+.|++||.|+.
T Consensus 61 a~l~v~~g~~V~~g~~la~ 79 (352)
T 2xhc_A 61 AKLHVNNGKDVNKGDLIAE 79 (352)
T ss_dssp CEESCCTTCEECTTCEEEE
T ss_pred CEEEecCCCEEcCCCEEEE
Confidence 4788999999999999975
No 247
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=21.70 E-value=1.6e+02 Score=20.48 Aligned_cols=112 Identities=13% Similarity=0.016 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe----EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCcc
Q psy10619 32 INVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV----FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNG 107 (246)
Q Consensus 32 ~~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~ 107 (246)
.....+++.+++.++..++.+.+ ...... .++..|+. .+..+...-..-.+......+++++|++.-..+ .
T Consensus 88 ~~~~~~l~~l~~~g~~~~i~s~~---~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~-~ 162 (207)
T 2go7_A 88 PGAREVLAWADESGIQQFIYTHK---GNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY-Y 162 (207)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSS---CTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEE-E
T ss_pred cCHHHHHHHHHHCCCeEEEEeCC---chHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEE-E
Confidence 45678888888888876665431 222233 55555541 111111110011234567788999998754432 1
Q ss_pred ccCCHHHHHHHHHHhCCcE-EEEeccCCCCceeEEeCCHHHHHHHH
Q psy10619 108 IIRDADHCVEIARDIGYPV-MIKASAGGGGKGMRIANNDQEAIEGF 152 (246)
Q Consensus 108 ~~~~~~~~~~~~~~~~~P~-vvKp~~g~g~~gv~~v~~~~el~~~~ 152 (246)
.-++..++. .++..|+++ .+.... . ..-.++.+..|+.+.+
T Consensus 163 iGD~~nDi~-~~~~aG~~~i~~~~~~-~--~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 163 IGDRTLDVE-FAQNSGIQSINFLEST-Y--EGNHRIQALADISRIF 204 (207)
T ss_dssp EESSHHHHH-HHHHHTCEEEESSCCS-C--TTEEECSSTTHHHHHT
T ss_pred ECCCHHHHH-HHHHCCCeEEEEecCC-C--CCCEEeCCHHHHHHHH
Confidence 234555554 466788884 444332 2 4456677877775543
No 248
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=20.44 E-value=71 Score=25.93 Aligned_cols=25 Identities=20% Similarity=0.344 Sum_probs=21.0
Q ss_pred cceeeeeeecCCCeeeCCCeEEEEc
Q psy10619 220 PGLVKSVNCKVGDQIMEGQELCVVG 244 (246)
Q Consensus 220 pg~i~~l~~~~G~~v~~g~~~~v~e 244 (246)
|++-....++-|+.|.+||+|+.++
T Consensus 106 ~~~~v~~~~~dG~~v~~g~~l~~v~ 130 (320)
T 3paj_A 106 GQVSIEWHVQDGDTLTPNQTLCTLT 130 (320)
T ss_dssp SCCEEEESSCTTCEECTTCEEEEEE
T ss_pred CCeEEEEEeCCCCEecCCCEEEEEE
Confidence 3555667889999999999999886
No 249
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=20.44 E-value=2.5e+02 Score=22.27 Aligned_cols=78 Identities=15% Similarity=0.052 Sum_probs=41.2
Q ss_pred HHHHHHHHcCCeEeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCCccccCCHHHHHHHHHHhCCcEEEEeccCCCCceeE
Q psy10619 61 SFVSRLKEEGVVFIGPTAECIRGMGDKLESKKLAKEAGVNIIPGFNGIIRDADHCVEIARDIGYPVMIKASAGGGGKGMR 140 (246)
Q Consensus 61 ~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~g~g~~gv~ 140 (246)
.+.+.+++.|++++... .|.... +++.+ .++.-.--...+++.+-+ ..+.+.+.|+++|--..+
T Consensus 80 ~l~~~~~~~Glp~~te~-------~d~~~~-~~l~~-~vd~~kIgA~~~~n~~Ll-~~~a~~~kPV~lk~G~~~------ 143 (292)
T 1o60_A 80 IFQELKDTFGVKIITDV-------HEIYQC-QPVAD-VVDIIQLPAFLARQTDLV-EAMAKTGAVINVKKPQFL------ 143 (292)
T ss_dssp HHHHHHHHHCCEEEEEC-------CSGGGH-HHHHT-TCSEEEECGGGTTCHHHH-HHHHHTTCEEEEECCTTS------
T ss_pred HHHHHHHHcCCcEEEec-------CCHHHH-HHHHh-cCCEEEECcccccCHHHH-HHHHcCCCcEEEeCCCCC------
Confidence 34555677788776322 233222 22333 333211001235666644 445588999999954432
Q ss_pred EeCCHHHHHHHHHHHHH
Q psy10619 141 IANNDQEAIEGFKLSSQ 157 (246)
Q Consensus 141 ~v~~~~el~~~~~~~~~ 157 (246)
+.+|+..+.+.+..
T Consensus 144 ---t~~ei~~Av~~i~~ 157 (292)
T 1o60_A 144 ---SPSQMGNIVEKIEE 157 (292)
T ss_dssp ---CGGGHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHH
Confidence 55677777766543
No 250
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=20.35 E-value=1.1e+02 Score=18.19 Aligned_cols=23 Identities=17% Similarity=0.199 Sum_probs=17.6
Q ss_pred cceeeeeeecCCCeeeCCCeEEE
Q psy10619 220 PGLVKSVNCKVGDQIMEGQELCV 242 (246)
Q Consensus 220 pg~i~~l~~~~G~~v~~g~~~~v 242 (246)
.|.+.+-....|..|.+|+.|.+
T Consensus 44 ~G~Vi~q~P~~G~~v~~g~~V~l 66 (71)
T 3ouv_A 44 AGEVTGTNPPAGTTVPVDSVIEL 66 (71)
T ss_dssp TTBEEEEESCTTCEEETTSCEEE
T ss_pred CCEEEEeeCCCCCCcCCCCEEEE
Confidence 46777777788888888888764
No 251
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=20.30 E-value=2.4e+02 Score=19.98 Aligned_cols=115 Identities=10% Similarity=-0.082 Sum_probs=64.5
Q ss_pred CHHHHHHHHHHhCCCEEccccccCCCCHHHHHHHHHcCCe-------EeCCCHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Q psy10619 33 NVDKIIDAIRQTRADAVHPGYGFLSENASFVSRLKEEGVV-------FIGPTAECIRGMGDKLESKKLAKEAGVNIIPGF 105 (246)
Q Consensus 33 ~~~~l~~~~~~~~~d~v~~~~~~~~e~~~~~~~~~~~g~~-------~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~ 105 (246)
....+++.+++.++..++.+.+ ........++..|+. +++.. ....-.+....+.+++++|++.-..+
T Consensus 74 ~~~~~l~~l~~~g~~~~i~s~~---~~~~~~~~l~~~~l~~~f~~~~i~~~~--~~~~kp~~~~~~~~~~~~g~~~~~~i 148 (205)
T 3m9l_A 74 GAVELVRELAGRGYRLGILTRN---ARELAHVTLEAIGLADCFAEADVLGRD--EAPPKPHPGGLLKLAEAWDVSPSRMV 148 (205)
T ss_dssp THHHHHHHHHHTTCEEEEECSS---CHHHHHHHHHHTTCGGGSCGGGEECTT--TSCCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred cHHHHHHHHHhcCCeEEEEeCC---chHHHHHHHHHcCchhhcCcceEEeCC--CCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 5678888888888887765531 112344556666652 22211 11111234567888999999754432
Q ss_pred ccccCCHHHHHHHHHHhCCc-EEEEeccCC-CCceeEEeCCHHHHHHHHHH
Q psy10619 106 NGIIRDADHCVEIARDIGYP-VMIKASAGG-GGKGMRIANNDQEAIEGFKL 154 (246)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~P-~vvKp~~g~-g~~gv~~v~~~~el~~~~~~ 154 (246)
.+-.+..++. .++..|.+ +.+...... ....-+++.+.+||.+.++.
T Consensus 149 -~iGD~~~Di~-~a~~aG~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 149 -MVGDYRFDLD-CGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp -EEESSHHHHH-HHHHHTCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred -EECCCHHHHH-HHHHcCCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence 1234555543 56678884 444332211 11134677899998887765
No 252
>1g2r_A Hypothetical cytosolic protein; NUSA-INFB operon, structural genomics, PSI, protein structure initiative; 1.35A {Streptococcus pneumoniae} SCOP: d.192.1.1
Probab=20.25 E-value=1.6e+02 Score=19.31 Aligned_cols=30 Identities=30% Similarity=0.449 Sum_probs=24.1
Q ss_pred cEEEEeccCCCCceeEEeCCHHHHHHHHHH
Q psy10619 125 PVMIKASAGGGGKGMRIANNDQEAIEGFKL 154 (246)
Q Consensus 125 P~vvKp~~g~g~~gv~~v~~~~el~~~~~~ 154 (246)
-+++-|..-..|+|.+++.+.+-++.+...
T Consensus 36 ~v~~D~~~k~~GRGaYvc~~~~cl~~A~kk 65 (100)
T 1g2r_A 36 QVFIDPTGKANGRGAYIKLDNAEALEAKKK 65 (100)
T ss_dssp CEEEETTSCCCSEEEEEESCHHHHHHHHHH
T ss_pred cEEECCCCCCCCCEEEeCCCHHHHHHHHHH
Confidence 467777767799999999999888877654
Done!