Query psy10623
Match_columns 216
No_of_seqs 217 out of 847
Neff 5.8
Searched_HMMs 46136
Date Fri Aug 16 23:15:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10623.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10623hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0517|consensus 100.0 3.1E-55 6.7E-60 444.6 13.3 162 10-212 159-320 (2473)
2 KOG0035|consensus 100.0 1.2E-33 2.6E-38 278.4 6.2 160 13-213 136-298 (890)
3 COG5069 SAC6 Ca2+-binding acti 99.9 1.1E-26 2.3E-31 216.3 5.1 152 16-208 123-278 (612)
4 PF00307 CH: Calponin homology 99.8 5.1E-20 1.1E-24 138.9 9.5 102 20-122 1-108 (108)
5 KOG0046|consensus 99.8 2.7E-20 5.8E-25 175.2 6.7 179 12-207 258-438 (627)
6 cd00014 CH Calponin homology d 99.8 2.2E-19 4.7E-24 135.4 5.3 102 19-122 2-107 (107)
7 smart00033 CH Calponin homolog 99.7 5.9E-18 1.3E-22 126.3 3.6 97 20-116 2-102 (103)
8 PF11971 CAMSAP_CH: CAMSAP CH 99.3 7E-13 1.5E-17 99.1 1.5 75 26-101 1-82 (85)
9 COG5069 SAC6 Ca2+-binding acti 98.4 1.9E-07 4.2E-12 88.4 4.8 170 15-207 258-430 (612)
10 KOG0035|consensus 98.3 5.5E-07 1.2E-11 90.6 3.5 100 16-120 419-519 (890)
11 KOG0046|consensus 97.8 3.4E-05 7.4E-10 74.1 5.4 99 17-118 508-612 (627)
12 PF06294 DUF1042: Domain of Un 96.9 0.00067 1.4E-08 56.1 2.9 93 23-123 1-101 (158)
13 KOG0518|consensus 95.8 0.00084 1.8E-08 68.8 -3.3 103 14-116 134-246 (1113)
14 KOG3631|consensus 95.3 0.053 1.1E-06 49.0 6.5 99 19-124 258-362 (365)
15 KOG2046|consensus 94.1 0.21 4.5E-06 42.8 7.0 96 18-117 25-125 (193)
16 KOG3000|consensus 88.8 1.1 2.3E-05 40.8 5.9 94 19-123 16-117 (295)
17 KOG2996|consensus 83.6 0.77 1.7E-05 45.6 2.3 84 36-120 27-118 (865)
18 KOG0517|consensus 79.4 4.3 9.4E-05 45.1 6.3 99 20-122 50-151 (2473)
19 COG5199 SCP1 Calponin [Cytoske 60.9 21 0.00045 29.9 5.1 104 18-125 13-120 (178)
20 KOG0532|consensus 51.8 6.9 0.00015 39.2 1.0 85 15-100 569-664 (722)
21 KOG3631|consensus 51.2 33 0.00072 31.4 5.2 101 21-124 93-198 (365)
22 cd08540 SAM_PNT-ERG Sterile al 45.3 17 0.00038 26.4 2.1 35 21-57 11-47 (75)
23 cd08542 SAM_PNT-ETS-1 Sterile 40.9 22 0.00047 26.8 2.1 34 21-57 25-60 (88)
24 cd08541 SAM_PNT-FLI-1 Sterile 39.3 24 0.00053 26.7 2.1 36 20-57 22-59 (91)
25 cd08543 SAM_PNT-ETS-2 Sterile 36.5 29 0.00062 26.2 2.1 34 21-57 25-60 (89)
26 PF06395 CDC24: CDC24 Calponin 33.2 36 0.00079 25.7 2.2 61 40-100 4-70 (89)
27 PF15546 DUF4653: Domain of un 32.9 62 0.0013 28.3 3.8 39 175-215 158-214 (239)
28 PF05622 HOOK: HOOK protein; 32.7 50 0.0011 33.3 3.8 44 18-65 7-50 (713)
29 cd08534 SAM_PNT-GABP-alpha Ste 30.6 37 0.00079 25.6 1.8 35 20-57 24-60 (89)
30 KOG3170|consensus 25.1 40 0.00087 29.6 1.4 18 46-63 119-136 (240)
31 cd08535 SAM_PNT-Tel_Yan Steril 23.9 66 0.0014 22.9 2.1 34 21-57 9-44 (68)
32 cd08757 SAM_PNT_ESE Sterile al 23.5 67 0.0014 22.7 2.1 34 21-57 8-45 (68)
33 cd08537 SAM_PNT-ESE-1-like Ste 22.8 66 0.0014 23.8 1.9 36 19-57 14-53 (78)
34 cd08203 SAM_PNT Sterile alpha 22.2 77 0.0017 22.1 2.2 33 21-56 8-42 (66)
35 cd08539 SAM_PNT-ESE-3-like Ste 21.1 52 0.0011 24.1 1.1 36 20-56 10-47 (74)
36 PF01372 Melittin: Melittin; 20.9 96 0.0021 18.1 1.9 17 192-208 9-25 (26)
37 PF11735 CAP59_mtransfer: Cryp 20.0 1.2E+02 0.0026 26.8 3.4 72 49-121 20-98 (241)
No 1
>KOG0517|consensus
Probab=100.00 E-value=3.1e-55 Score=444.62 Aligned_cols=162 Identities=53% Similarity=0.920 Sum_probs=157.5
Q ss_pred ccccccCCCHHHHHHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCCcccHHhhHHHHHHHHHHhc
Q psy10623 10 ENESSEKKSAKDALLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQPTRHIDNLNNAFDVASTEL 89 (216)
Q Consensus 10 ~~~~~~~~sak~~LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~~~~~~enl~~Af~vAe~~L 89 (216)
+++..|++|||++||.|||++|+|||||+|+|||+||+||+||+||||+|||||+||++|.++++.+|++.||++||++|
T Consensus 159 ~edn~E~rSAKDALLLWCQmKTAGYpnVNI~nFTtSWRdGLaFNALIHkHRPDLvDf~~L~k~na~~NL~~AFdvAE~~L 238 (2473)
T KOG0517|consen 159 TEDNRETRSAKDALLLWCQMKTAGYPNVNITNFTTSWRDGLAFNALIHKHRPDLVDFDKLKKSNALYNLQHAFDVAEQEL 238 (2473)
T ss_pred cccchhhhhHHHHHHHHHHhhccCCCCcccccCccchhcchhHHHHHHhcCcchhhhcccCCCchhhHHHHHHHHHHHHc
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCCCCChhHHHHHHHHHHHHhhhcchhhhhcccccchhhhHHHHHhhccccchhhhhcccCcccccccc
Q psy10623 90 GIPRLLDAEDVDTTRPDEKSVITYVASYYHTFARMKNEMKSGRRIANVSFLTLILFSLKSGEELSVTKIILPYSAVLCVR 169 (216)
Q Consensus 90 gIp~lLdpeDv~~~~pDeksimtYvs~~y~~f~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (216)
||+++||||||.+..||||||||||+.|||||++|+...+.||||+|
T Consensus 239 Gia~LLDpEDV~v~~PDEKSIITYV~~YYHyFsKmK~~~v~gKRIgk--------------------------------- 285 (2473)
T KOG0517|consen 239 GIAKLLDPEDVNVEQPDEKSIITYVVTYYHYFSKMKQLAVEGKRIGK--------------------------------- 285 (2473)
T ss_pred CchhcCCHhhcCccCCCcchHHHHHHHHHHHHHHHHHHHhhhhHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhh
Q psy10623 170 ESGSPMNQIVSQMMDADKKKMMYERLNRDLLEYLPVYHARKNN 212 (216)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~l~~~ye~~~~~ll~wi~~~~~~~~~ 212 (216)
|++++|++++|+++||.++++||+||++||-.+|+
T Consensus 286 --------Vl~~lme~ekm~~~YE~LasdLL~WI~~ti~~L~~ 320 (2473)
T KOG0517|consen 286 --------VLDQLMETEKMIEQYEGLASDLLEWIEQTIQTLES 320 (2473)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 67899999999999999999999999999999886
No 2
>KOG0035|consensus
Probab=99.98 E-value=1.2e-33 Score=278.45 Aligned_cols=160 Identities=48% Similarity=0.812 Sum_probs=146.7
Q ss_pred ccc-CCCHHHHHHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCC-CCCCCcccHHhhHHHHHHHHHHhcC
Q psy10623 13 SSE-KKSAKDALLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLID-FSQLQPTRHIDNLNNAFDVASTELG 90 (216)
Q Consensus 13 ~~~-~~sak~~LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid-~~~L~~~~~~enl~~Af~vAe~~Lg 90 (216)
+.+ ..++++.||.|||++|++|.+|+|.||++||+||++|||+||+|||++|| |+.+.+.++.+|++.||++||+.+|
T Consensus 136 s~~~e~~a~egllLwcq~~Ta~y~~v~v~nF~~sw~~gl~f~A~ih~~Rpdli~~y~~lt~~~~~~n~~~A~~iAek~l~ 215 (890)
T KOG0035|consen 136 SVECELSAKEGLLLWCQRKTAPYSNVNVQNFHTSWKDGLAFCALIHRHRPDLIDQYDKLTKQDPVENLNLAFDIAEKFLG 215 (890)
T ss_pred hhhcchhhhhhhhhheecccCCccccccccceecccchHHHHHHHHhcChhhhhhhhhcCccchhHHhhhhhhhhhhcCC
Confidence 344 78999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred CCCCCCcccC-CCCCCChhHHHHHHHHHHHHhhhcchhhhhcccccchhhhHHHHHhhccccchhhhhcccCcccccccc
Q psy10623 91 IPRLLDAEDV-DTTRPDEKSVITYVASYYHTFARMKNEMKSGRRIANVSFLTLILFSLKSGEELSVTKIILPYSAVLCVR 169 (216)
Q Consensus 91 Ip~lLdpeDv-~~~~pDeksimtYvs~~y~~f~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (216)
|+++|+++|+ ..+.||+++|||||++|||.|++....++.+.+|.++
T Consensus 216 i~r~ld~ed~~~~~~pde~aimtyv~~~~~~fSg~~~~~t~~n~i~s~-------------------------------- 263 (890)
T KOG0035|consen 216 IPRLLDAEDIVEAAIPDEKAIMTYVSSYYHAFSGAEAAETAANRICSV-------------------------------- 263 (890)
T ss_pred cccccCccccccCCCCchhhhhhhhhhccccccCcchhhhhcccccch--------------------------------
Confidence 9999999997 4579999999999999999999999988888888773
Q ss_pred cCCCCchhHHHhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhhc
Q psy10623 170 ESGSPMNQIVSQMMDADKKKMMYERLNRDLLEYLPVYHARKNNL 213 (216)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~l~~~ye~~~~~ll~wi~~~~~~~~~~ 213 (216)
...-++.+.++++||+.+++++.||+.++--+.|.
T Consensus 264 ---------~av~qe~~~~~e~~e~~~s~~l~~~~~~~P~l~~r 298 (890)
T KOG0035|consen 264 ---------LAVNQEKETTMEEYETLASELLEWIARRTPWLQNR 298 (890)
T ss_pred ---------hhccccccchHHHHHHHhhhhhhHHHhcCcccccc
Confidence 23447778888999999999999999988766653
No 3
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=99.93 E-value=1.1e-26 Score=216.35 Aligned_cols=152 Identities=34% Similarity=0.553 Sum_probs=131.7
Q ss_pred CCCHHHHHHHHHHHhhCCCC-CcccCCCCCccccchhhHHHHHHhCCCCCCCCCCC--cccHHhhHHHHHHHHHHhcCCC
Q psy10623 16 KKSAKDALLLWCQRKTNGYP-GVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQ--PTRHIDNLNNAFDVASTELGIP 92 (216)
Q Consensus 16 ~~sak~~LL~Wcq~~t~~Y~-~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~--~~~~~enl~~Af~vAe~~LgIp 92 (216)
..+++..||+||++.|++|. ++.+.+|+.||+||+|||||||.+|||++|+..++ +++...|+.+||++|++-+||+
T Consensus 123 elt~~~~lllwc~~~t~~y~p~vd~~df~rswrdGLaf~aLIh~~rPDtld~n~ld~qkknk~~n~~qafe~a~k~Igi~ 202 (612)
T COG5069 123 ELTKHINLLLWCDEDTGGYKPEVDTFDFFRSWRDGLAFSALIHDSRPDTLDPNVLDLQKKNKALNNFQAFENANKVIGIA 202 (612)
T ss_pred hHHhhhhhheeccccccCcCCCccHHHHHHHhhhhHHHHHHHhhcCCcccCccccchhhcccchhHHHHHHHHHHhhchH
Confidence 58899999999999999995 48999999999999999999999999999999988 8899999999999999999999
Q ss_pred CCCCcccC-CCCCCChhHHHHHHHHHHHHhhhcchhhhhcccccchhhhHHHHHhhccccchhhhhcccCcccccccccC
Q psy10623 93 RLLDAEDV-DTTRPDEKSVITYVASYYHTFARMKNEMKSGRRIANVSFLTLILFSLKSGEELSVTKIILPYSAVLCVRES 171 (216)
Q Consensus 93 ~lLdpeDv-~~~~pDeksimtYvs~~y~~f~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (216)
++++.+|| ..+.|||+++||||+.||+.|.-+.+...+.+|+..
T Consensus 203 rli~vedivnV~~pDERsimtyv~~y~~rf~~l~Kid~al~rv~r----------------------------------- 247 (612)
T COG5069 203 RLIGVEDIVNVSIPDERSIMTYVSWYIIRFGLLEKIDIALHRVYR----------------------------------- 247 (612)
T ss_pred hhcCcceeeecCCcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHH-----------------------------------
Confidence 99999996 578999999999999999999999887776666433
Q ss_pred CCCchhHHHhhhhHHHHHHHHHHHHHHHHHhHHHHHH
Q psy10623 172 GSPMNQIVSQMMDADKKKMMYERLNRDLLEYLPVYHA 208 (216)
Q Consensus 172 ~~~~~~~~~~~~~~~~l~~~ye~~~~~ll~wi~~~~~ 208 (216)
+++..+....|+-.||..+..|+.-|+...+
T Consensus 248 ------llE~~et~~qlrl~yE~~l~rll~~i~~~q~ 278 (612)
T COG5069 248 ------LLEADETLIQLRLPYEIILLRLLNLIHLKQA 278 (612)
T ss_pred ------HHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence 4555666666777788877777775554433
No 4
>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []. It comprises the following groups of actin-binding domains: Actinin-type (including spectrin, fimbrin, ABP-280) (see IPR001589 from INTERPRO). Calponin-type (see IPR000557 from INTERPRO). A comprehensive review of proteins containing this type of actin-binding domains is given in []. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity []. Most proteins have two copies of the CH domain, however some proteins such as calponin and the human vav proto-oncogene (P15498 from SWISSPROT) have only a single copy. The structure of an example CH-domain has recently been solved []. This entry represents the calponin-homology (CH) domain, a superfamily of actin-binding domains found in cytoskeletal proteins (contain two CH domain in tandem repeat), in regulatory proteins from muscle, and in signal transduction proteins. This domain has a core structure consisting of a 4-helical bundle. This domain is found in: Calponin, which is involved in the regulation of contractility and organisation of the actin cytoskeleton in smooth muscle cells []. Beta-spectrin, a major component of a submembrane cytoskeletal network connecting actin filaments to integral plasma membrane proteins []. The actin-cross-linking domain of the fimbrin/plastin family of actin filament bundling or cross-linking proteins []. Utrophin,a close homologue of dystrophin []. Dystrophin, the protein found to be defective in Duchenne muscular dystrophy; this protein contains a tandem repeat of two CH domains []. Actin-binding domain of plectin, a large and widely expressed cytolinker protein []. The N-terminal microtubule-binding domain of microtubule-associated protein eb1 (end-binding protein), a member of a conserved family of proteins that localise to the plus-ends of microtubules []. Ras GTPase-activating-like protein rng2, an IQGAP protein that is essential for the assembly of an actomyosin ring during cytokinesis []. Transgelin, which suppresses androgen receptor transactivation []. ; GO: 0005515 protein binding; PDB: 2DK9_A 1WYL_A 1WKU_B 1TJT_A 3FER_A 2WA7_A 2WA5_A 2WA6_A 2R0O_A 1PXY_A ....
Probab=99.82 E-value=5.1e-20 Score=138.86 Aligned_cols=102 Identities=30% Similarity=0.604 Sum_probs=91.4
Q ss_pred HHHHHHHHHHhhCCC-CCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCCcc-----cHHhhHHHHHHHHHHhcCCCC
Q psy10623 20 KDALLLWCQRKTNGY-PGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQPT-----RHIDNLNNAFDVASTELGIPR 93 (216)
Q Consensus 20 k~~LL~Wcq~~t~~Y-~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~~~-----~~~enl~~Af~vAe~~LgIp~ 93 (216)
++.|+.|||.++..+ ++..|+||.++|+||++||.||+.+.|+.+++..+.+. ...+|++.|++.+++++||+.
T Consensus 1 e~~ll~Win~~l~~~~~~~~v~~~~~~l~dG~~L~~Li~~l~p~~i~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~lg~~~ 80 (108)
T PF00307_consen 1 EKELLKWINSHLEKYGKGRRVTNFSEDLRDGVVLCKLINKLFPGTIDLKKINPNLKSPFDKLENIELALEAAEKKLGIPP 80 (108)
T ss_dssp HHHHHHHHHHHHTTSTTTSTCSSTSGGGTTSHHHHHHHHHHSTTSSSGGGSSTSSSSHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHcccccCCCCcCcHHHHhcCHHHHHHHHHHHhhccchhhhccccchhhhHHHHHHHHHHHHHHHHcCCCC
Confidence 578999999999877 36799999999999999999999999999999998543 799999999999998899999
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHHhh
Q psy10623 94 LLDAEDVDTTRPDEKSVITYVASYYHTFA 122 (216)
Q Consensus 94 lLdpeDv~~~~pDeksimtYvs~~y~~f~ 122 (216)
.++++|+.. .+|++.|++|+.+++++|.
T Consensus 81 ~~~~~dl~~-~~~~~~vl~~l~~l~~~~e 108 (108)
T PF00307_consen 81 LLSPEDLVE-KGDEKSVLSFLWQLFRYFE 108 (108)
T ss_dssp TS-HHHHHS-TT-HHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHH-CcCHHHHHHHHHHHHHHHC
Confidence 999999865 7899999999999999984
No 5
>KOG0046|consensus
Probab=99.81 E-value=2.7e-20 Score=175.22 Aligned_cols=179 Identities=16% Similarity=0.273 Sum_probs=160.6
Q ss_pred ccccCCCHHHHHHHHHHHhh--CCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCCcccHHhhHHHHHHHHHHhc
Q psy10623 12 ESSEKKSAKDALLLWCQRKT--NGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQPTRHIDNLNNAFDVASTEL 89 (216)
Q Consensus 12 ~~~~~~sak~~LL~Wcq~~t--~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~~~~~~enl~~Af~vAe~~L 89 (216)
++.+++++++.||+|++.+. +|| ...++||+++.+||.|+..|++...|...+...|...+..++.+..++-|| +|
T Consensus 258 Eelm~L~PEkiLLrW~N~HL~kag~-~k~~~nFs~DikD~eaY~~LLnqlap~~~~~~~l~~~d~l~RA~~vLq~Ae-kl 335 (627)
T KOG0046|consen 258 EELMRLPPEKILLRWMNYHLKKAGW-KKTVTNFSSDIKDSEAYTHLLNQLAPEHCSPAPLQETDDLERAELVLQQAE-KL 335 (627)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhccc-ceehhhhhhhhccHHHHHHHHHHhccccCCccccccCChHhHHHHHHHHHH-hc
Confidence 46789999999999999996 577 678999999999999999999999999999999999999999999999998 79
Q ss_pred CCCCCCCcccCCCCCCChhHHHHHHHHHHHHhhhcchhhhhcccccchhhhHHHHHhhccccchhhhhcccCcccccccc
Q psy10623 90 GIPRLLDAEDVDTTRPDEKSVITYVASYYHTFARMKNEMKSGRRIANVSFLTLILFSLKSGEELSVTKIILPYSAVLCVR 169 (216)
Q Consensus 90 gIp~lLdpeDv~~~~pDeksimtYvs~~y~~f~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (216)
|+.++++|.|+..+.| +..++||+++|+.+++++..+.... +. ...++.+.+|++|+++.|++|.
T Consensus 336 ~Cr~~ltp~dvV~G~~--kLNLAFVA~lFn~~pgL~~~~~~~~--~e-----~~~~~~~~~reer~fr~WmNSl------ 400 (627)
T KOG0046|consen 336 DCRRYLTPTDVVAGNP--KLNLAFVANLFNTHPGLEKPENEEI--AE-----MMTEDEEESREERTFRLWMNSL------ 400 (627)
T ss_pred CCccccCHHHHhcCCc--hhhHHHHHHhcccCCCCCCccccch--hc-----ccchhHhHHHHHHHHHHHHHhc------
Confidence 9999999999999988 8999999999999999876432211 11 2457888999999999999998
Q ss_pred cCCCCchhHHHhhhhHHHHHHHHHHHHHHHHHhHHHHH
Q psy10623 170 ESGSPMNQIVSQMMDADKKKMMYERLNRDLLEYLPVYH 207 (216)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~l~~~ye~~~~~ll~wi~~~~ 207 (216)
+..++|+++|+++.+++.+.+-|+++.++-++|.+..-
T Consensus 401 gv~p~vn~~f~Dl~dglVllq~~dki~pg~Vnwk~vnK 438 (627)
T KOG0046|consen 401 GVNPYVNNLFEDLRDGLVLLQLYDKVSPGSVNWKHVNK 438 (627)
T ss_pred CCcHHHHHHHHhhhhhhHHHHHHHHccCCccchhhccC
Confidence 66778999999999999999999999999999988653
No 6
>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Probab=99.78 E-value=2.2e-19 Score=135.42 Aligned_cols=102 Identities=32% Similarity=0.567 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCC---CCcccHHhhHHHHHHHHHHhcCCCCC-
Q psy10623 19 AKDALLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQ---LQPTRHIDNLNNAFDVASTELGIPRL- 94 (216)
Q Consensus 19 ak~~LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~---L~~~~~~enl~~Af~vAe~~LgIp~l- 94 (216)
.++.++.|||.+++.+..+.|+||+++|+||.+||+|++.+.|+.+++.. .......+|++.+++.|++ +|||..
T Consensus 2 ~~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~Ll~~~~p~~~~~~~~~~~~~~~~~~Ni~~~l~~~~~-~gi~~~~ 80 (107)
T cd00014 2 QKEELLRWINKVLGEYGPVTINNFSTDLKDGIALCKLLNSLSPDLIDKKKINPLSRFKRLENINLALNFAEK-LGVPVVN 80 (107)
T ss_pred hHHHHHHHHHHHhccCCCccHHHHHHHHhchHHHHHHHHHHCccccccccccccchhhHHHHHHHHHHHHHH-cCCceec
Confidence 57899999999999986668999999999999999999999999997766 4567889999999999985 999998
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHHhh
Q psy10623 95 LDAEDVDTTRPDEKSVITYVASYYHTFA 122 (216)
Q Consensus 95 LdpeDv~~~~pDeksimtYvs~~y~~f~ 122 (216)
++|+|+.. .+|++.|++|+.+++++|.
T Consensus 81 ~~~~Dl~~-~~n~~~vl~~l~~l~~~~~ 107 (107)
T cd00014 81 FDAEDLVE-DGDEKLVLGLLWSLIRKFL 107 (107)
T ss_pred cCHHHHhh-CCCceeeHHHHHHHHHhhC
Confidence 99999863 7889999999999999873
No 7
>smart00033 CH Calponin homology domain. Actin binding domains present in duplicate at the N-termini of spectrin-like proteins (including dystrophin, alpha-actinin). These domains cross-link actin filaments into bundles and networks. A calponin homology domain is predicted in yeasst Cdc24p.
Probab=99.70 E-value=5.9e-18 Score=126.34 Aligned_cols=97 Identities=21% Similarity=0.301 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCC----cccHHhhHHHHHHHHHHhcCCCCCC
Q psy10623 20 KDALLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQ----PTRHIDNLNNAFDVASTELGIPRLL 95 (216)
Q Consensus 20 k~~LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~----~~~~~enl~~Af~vAe~~LgIp~lL 95 (216)
++.++.|||.+++.|.+..|+||+++|+||.+||+|+|.+.|+.+++.... .....+|++.+++.+++...++.++
T Consensus 2 ~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~L~~~l~p~~i~~~~~~~~~~~~~~~~Ni~~~l~~~~~~g~~~~~~ 81 (103)
T smart00033 2 EKTLLRWVNSLLAEYGKPPVTNFSSDLSDGVALCKLLNSLSPGSVDKKKVNASLSRFKKIENINLALSFAEKLGGKLVLF 81 (103)
T ss_pred hHHHHHHHHHHcccCCCCcHHHHHHHHccHHHHHHHHHHHCCCcCChhhccccccHHHHHHhHHHHHHHHHHcCCeeecc
Confidence 678999999999998778999999999999999999999999999876654 3457899999999999663347899
Q ss_pred CcccCCCCCCChhHHHHHHHH
Q psy10623 96 DAEDVDTTRPDEKSVITYVAS 116 (216)
Q Consensus 96 dpeDv~~~~pDeksimtYvs~ 116 (216)
+|+|+..++++.++++.|+..
T Consensus 82 ~~~Dl~~~~k~~~~v~~~l~~ 102 (103)
T smart00033 82 EPEDLVEGNKLILGVIWTLIL 102 (103)
T ss_pred CHHHHhhcchHHHHHHHHHHh
Confidence 999987665888999988864
No 8
>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins.
Probab=99.29 E-value=7e-13 Score=99.11 Aligned_cols=75 Identities=24% Similarity=0.383 Sum_probs=64.1
Q ss_pred HHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCC------cccHHhhHHHHHHHHHHhcCCC-CCCCcc
Q psy10623 26 WCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQ------PTRHIDNLNNAFDVASTELGIP-RLLDAE 98 (216)
Q Consensus 26 Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~------~~~~~enl~~Af~vAe~~LgIp-~lLdpe 98 (216)
|++.+...| +..|.||+.|++||+++|+|||+|.|++|+++.+. ..+...|++...+.++++||.. ..+++|
T Consensus 1 ~~~~~~~~~-~~~v~dl~~~l~DG~~Lc~Lih~Y~P~~l~~~~I~~~~~mS~~~~l~N~~ll~~~c~~~l~~~~~~l~~e 79 (85)
T PF11971_consen 1 WVNARCAPY-FPPVEDLTQDLSDGRALCALIHFYCPQLLPLEDICLKTTMSQADSLYNLQLLNSFCQSHLGFSCCHLEPE 79 (85)
T ss_pred CCCcccCCC-CcchhhhhhhhccHHHHHHHHHHhCcceecHhHcccccchHHHHhhhhHHHHHHHHHHHcCCCcCcCCHH
Confidence 666677766 89999999999999999999999999999886654 4578899999999999999774 456888
Q ss_pred cCC
Q psy10623 99 DVD 101 (216)
Q Consensus 99 Dv~ 101 (216)
|+.
T Consensus 80 dl~ 82 (85)
T PF11971_consen 80 DLL 82 (85)
T ss_pred HHh
Confidence 863
No 9
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=98.44 E-value=1.9e-07 Score=88.40 Aligned_cols=170 Identities=12% Similarity=0.095 Sum_probs=138.2
Q ss_pred cCCCHHHHHHHHHH-Hhh-CCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCCcccHHhhHHHHHHHHHHhcCCC
Q psy10623 15 EKKSAKDALLLWCQ-RKT-NGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQPTRHIDNLNNAFDVASTELGIP 92 (216)
Q Consensus 15 ~~~sak~~LL~Wcq-~~t-~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~~~~~~enl~~Af~vAe~~LgIp 92 (216)
.+......|++|.+ .+. ++ +.+|+||+++-+||--..-|+..+. .++.-..+...+-...+......|+ .+.|.
T Consensus 258 lrl~yE~~l~rll~~i~~~q~--~w~v~~f~k~vsd~en~t~ll~ql~-alcsRa~lettdl~sl~gqi~~n~e-~y~~R 333 (612)
T COG5069 258 LRLPYEIILLRLLNLIHLKQA--NWKVVNFSKDVSDGENYTDLLNQLN-ALCSRAPLETTDLHSLAGQILQNAE-KYDCR 333 (612)
T ss_pred hcCCHHHHHHHHHHHHHHHhc--ccchhhhhhhhhhHHHHHHHHHHHH-HHhhcccchhhhHHHHHHHHHHHHH-Hhhhh
Confidence 68889999999999 333 23 4669999999999999999999998 7777777777788888999999997 79999
Q ss_pred CCCCcccCCCCCCChhHHHHHHHHHHHHhhhcchhhhhcccccchhhhHHHHHhhccccchhhhhcccCcccccccccCC
Q psy10623 93 RLLDAEDVDTTRPDEKSVITYVASYYHTFARMKNEMKSGRRIANVSFLTLILFSLKSGEELSVTKIILPYSAVLCVRESG 172 (216)
Q Consensus 93 ~lLdpeDv~~~~pDeksimtYvs~~y~~f~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (216)
+.+.| .++| +.-+.+++.+|+.+++++..+...++ ++ ..|++++.++.|++++|+++.- .+
T Consensus 334 KY~pP----AGnp--kldla~~~~lF~t~~~qe~l~~~~~~--eI-----~e~d~e~efear~~Tf~l~~~~------vs 394 (612)
T COG5069 334 KYLPP----AGNP--KLDLAFVAHLFNTHPGQEPLEEEEKP--EI-----EEFDAEGEFEARVFTFWLNSLD------VS 394 (612)
T ss_pred ccCCC----CCCc--ccchHHHHhhcCCCcccchhhhhccc--cc-----CCcchhhHHHHHHHHHHHHHhc------CC
Confidence 99999 3555 66789999999999887765544333 21 2377889999999999999973 44
Q ss_pred CCchhHHHhhhhHHHHHHHHHHHH-HHHHHhHHHHH
Q psy10623 173 SPMNQIVSQMMDADKKKMMYERLN-RDLLEYLPVYH 207 (216)
Q Consensus 173 ~~~~~~~~~~~~~~~l~~~ye~~~-~~ll~wi~~~~ 207 (216)
+++.++++++.|...+.+.|++.. +.-+.|...+.
T Consensus 395 p~i~~l~gd~Rdql~~lq~l~k~l~p~tv~~~~vk~ 430 (612)
T COG5069 395 PEITNLFGDLRDQLILLQALSKKLMPMTVTHKLVKK 430 (612)
T ss_pred hhhhhhcccHHHHHHHHHHHHhhcCCceechhhhcc
Confidence 579999999999999999999877 77777766654
No 10
>KOG0035|consensus
Probab=98.26 E-value=5.5e-07 Score=90.63 Aligned_cols=100 Identities=17% Similarity=0.057 Sum_probs=86.0
Q ss_pred CCCHHHHHHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCCcccHHhhHHHHHHHHHHhcCCCCCC
Q psy10623 16 KKSAKDALLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQPTRHIDNLNNAFDVASTELGIPRLL 95 (216)
Q Consensus 16 ~~sak~~LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~~~~~~enl~~Af~vAe~~LgIp~lL 95 (216)
.......||.||+..+.+|+++.++++ ++|+.|.+||||+|.+.|++++++.+...+...|...+|+.+. | +++.
T Consensus 419 ~~d~~~~lle~~ke~~~~~ea~~~~~~-~~~~~~e~~~ai~~~~~~~~~~~~~~~a~~~q~i~dq~~~~~~--l--s~~r 493 (890)
T KOG0035|consen 419 LNDYGQALLEECKELTKKHEAFESDLS-AHQDNVEAFCAIAHELNELLYDDAKLVAADCQHICDQWDDLGQ--L--SRKR 493 (890)
T ss_pred hcchHHHHHHHHHhhcccccccccchh-hhhcchhHHHHHHHHhhhhhhhhhhhhhhhhhhccccccccch--h--hhhh
Confidence 445668899999999999999999999 8999999999999999999999999999999999999999885 3 7778
Q ss_pred CcccCC-CCCCChhHHHHHHHHHHHH
Q psy10623 96 DAEDVD-TTRPDEKSVITYVASYYHT 120 (216)
Q Consensus 96 dpeDv~-~~~pDeksimtYvs~~y~~ 120 (216)
.|.++. ...||...+|+|..+..-+
T Consensus 494 ~pal~~~~~~~dk~~~~~le~a~Raa 519 (890)
T KOG0035|consen 494 RPALMQMEKVLDKLAVLTLEFAKRAA 519 (890)
T ss_pred chhhhhhhhhhHHHHHHHHHHHHHhh
Confidence 887763 4568888889887554433
No 11
>KOG0046|consensus
Probab=97.77 E-value=3.4e-05 Score=74.07 Aligned_cols=99 Identities=26% Similarity=0.379 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHhhCCC-CCcccCCCC-CccccchhhHHHHHHhCCCCCCCCCCCc----ccHHhhHHHHHHHHHHhcC
Q psy10623 17 KSAKDALLLWCQRKTNGY-PGVNIQDFT-GSWRSGLGFNALIHAHRPDLIDFSQLQP----TRHIDNLNNAFDVASTELG 90 (216)
Q Consensus 17 ~sak~~LL~Wcq~~t~~Y-~~v~V~nFs-tSW~DG~Af~ALIh~~rPdlid~~~L~~----~~~~enl~~Af~vAe~~Lg 90 (216)
......++.|+|++.+.- ..-.|..|. .+-+||+.|.-||+...|..|||+=+.. .++..|+++|+.+|. ++|
T Consensus 508 ~~tD~dIv~WaN~klk~~Gk~s~IrSFkD~siS~g~~vLDLidaI~P~~Vn~~LV~~G~t~EdK~~NAkYaIS~AR-KiG 586 (627)
T KOG0046|consen 508 DITDSDIVNWANRKLKKAGKKSQIRSFKDKSISDGLFVLDLLDAIKPGVVNYSLVTSGNTDEEKLLNAKYAISVAR-KLG 586 (627)
T ss_pred CCcHHHHHHHHHHHHHhcCCccccccccCcccccCcchHHHHhhcCcCccchhhccCCCChhhhhhcchhhHhHHH-hhC
Confidence 345667889999997432 255788887 6789999999999999999999987764 578889999999995 899
Q ss_pred CCCCCCcccCCCCCCChhHHHHHHHHHH
Q psy10623 91 IPRLLDAEDVDTTRPDEKSVITYVASYY 118 (216)
Q Consensus 91 Ip~lLdpeDv~~~~pDeksimtYvs~~y 118 (216)
..-.+-|||+..-+| |-|||..+++.
T Consensus 587 a~IyaLPEDIvEV~p--KMvltvfA~lM 612 (627)
T KOG0046|consen 587 ASIYALPEDIVEVNP--KMVLTVFASLM 612 (627)
T ss_pred ceEEeccHHHhhhch--hhhHHHHHHHH
Confidence 999999999875566 99999999875
No 12
>PF06294 DUF1042: Domain of Unknown Function (DUF1042); InterPro: IPR010441 This is a family of proteins of unknown function.; PDB: 2EE7_A.
Probab=96.92 E-value=0.00067 Score=56.10 Aligned_cols=93 Identities=20% Similarity=0.374 Sum_probs=54.2
Q ss_pred HHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCCccc----HHhhHHHH-HHHHHHhcCCCCCCCc
Q psy10623 23 LLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQPTR----HIDNLNNA-FDVASTELGIPRLLDA 97 (216)
Q Consensus 23 LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~~~~----~~enl~~A-f~vAe~~LgIp~lLdp 97 (216)
|++|+|..- -.+.+.|+..+|+||..++.|+++|.|.++|+....+.+ +..|-+.- ..+. +++||+ ++.
T Consensus 1 l~~WL~~l~---ls~~~~n~~rDfsdG~lvAEIl~~y~p~~vdlh~y~~~~s~~~Kl~NW~~Ln~kvl-~kl~~~--l~~ 74 (158)
T PF06294_consen 1 LLKWLQSLD---LSRPPKNIRRDFSDGYLVAEILSRYYPKLVDLHNYSNGNSVAQKLNNWETLNEKVL-KKLGIK--LDK 74 (158)
T ss_dssp HHHHHHHS-----S--SS-HHHHHTTSHHHHHHHHHH-TTT---SS----SSHHHHHHHHHHHHHHTT-GGGT------H
T ss_pred ChHHHhcCC---CCCCCCchHHHcccccHHHHHHHHHCCCCccccccCCCCCHHHHHHHHHHHHHHHH-HHcCCC--CCH
Confidence 689999822 146788999999999999999999999999998887643 34444443 4443 478884 666
Q ss_pred cc---CCCCCCChhHHHHHHHHHHHHhhh
Q psy10623 98 ED---VDTTRPDEKSVITYVASYYHTFAR 123 (216)
Q Consensus 98 eD---v~~~~pDeksimtYvs~~y~~f~~ 123 (216)
++ +..+.| -++...+.++|..+.+
T Consensus 75 ~~i~~i~~~~~--Gaae~lL~~L~~~l~~ 101 (158)
T PF06294_consen 75 EDIEGIINCKP--GAAESLLYQLYTKLTK 101 (158)
T ss_dssp HHHHHHHTT-T--TTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC--CHHHHHHHHHHHHHHH
Confidence 65 345556 4566666678887744
No 13
>KOG0518|consensus
Probab=95.79 E-value=0.00084 Score=68.82 Aligned_cols=103 Identities=17% Similarity=0.112 Sum_probs=84.7
Q ss_pred ccCCCHHHHHHHHHHHhh-----CCCCCcccCCCCCccccchhhHHHHHHhCCCCC-CCCCCCcccHHhhHHHHHHHHHH
Q psy10623 14 SEKKSAKDALLLWCQRKT-----NGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLI-DFSQLQPTRHIDNLNNAFDVAST 87 (216)
Q Consensus 14 ~~~~sak~~LL~Wcq~~t-----~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdli-d~~~L~~~~~~enl~~Af~vAe~ 87 (216)
..++.+++.=+.|+|..- ..-|.+.+.||+++|.||.|+.+++..-+|+.. +|.-..+.....|+..|+.-+++
T Consensus 134 ~~k~~p~e~~~h~~e~~~~e~~~~~sP~~~~v~~~td~n~~~Alg~~le~~~vg~p~~f~v~~~Ga~~gnl~~a~~gpse 213 (1113)
T KOG0518|consen 134 KTKRTPKEKGEHEVEVLYDEKPVPASPFVVKVNEGTDWNDVQALGPGLESARVGKPNVFEVETPGAGQGNLEVAVEGPSE 213 (1113)
T ss_pred eeecCchhccchhhhhhhcccccccCCceeccccccCcccceEeccchhhcccCCCceeEEecCCccccceeeeecChhh
Confidence 356667777777777532 223678899999999999999999999999987 67777778889999999999998
Q ss_pred hcCCCCCCCc----ccCCCCCCChhHHHHHHHH
Q psy10623 88 ELGIPRLLDA----EDVDTTRPDEKSVITYVAS 116 (216)
Q Consensus 88 ~LgIp~lLdp----eDv~~~~pDeksimtYvs~ 116 (216)
.+-.++.+.+ -++....||+.++++|.+.
T Consensus 214 ~~~~~~di~~g~c~veyip~~~gd~sv~~~~gg 246 (1113)
T KOG0518|consen 214 ALTVIPDIKPGSCSVEYIPPEPGDYSVNTYYGG 246 (1113)
T ss_pred hcccccccCCCcceeeecCCCCCceEEeeeecc
Confidence 8888888887 4566789999999999865
No 14
>KOG3631|consensus
Probab=95.25 E-value=0.053 Score=48.96 Aligned_cols=99 Identities=17% Similarity=0.295 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHh---CCCCC--CCCCCCcccHHhhHHHHHHHHHHhcCC-C
Q psy10623 19 AKDALLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAH---RPDLI--DFSQLQPTRHIDNLNNAFDVASTELGI-P 92 (216)
Q Consensus 19 ak~~LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~---rPdli--d~~~L~~~~~~enl~~Af~vAe~~LgI-p 92 (216)
.|++|+..||.+.... |..|+|+.+-|.||.-+.-|+--. .=-+- -...-+......|.+.||...++ -|. .
T Consensus 258 VK~sli~FvNkhLnkl-nLeVt~LdtQFaDGV~LvLL~GlLEgyFvpL~~F~Ltp~S~eekv~NVsfAfeLm~D-~GL~k 335 (365)
T KOG3631|consen 258 VKKSLITFVNKHLNKL-NLEVTELDTQFADGVYLVLLMGLLEGYFVPLHHFYLTPNSFEEKVHNVSFAFELMKD-GGLEK 335 (365)
T ss_pred HHHHHHHHHHHHhhhc-cceeehhhhhhccchHHHHHHHhhccceeecceeecCCCCHHHHHHHHHHHHHHHHc-cCcCC
Confidence 4789999999999776 899999999999997665554332 21111 11111245678999999999985 466 4
Q ss_pred CCCCcccCCCCCCChhHHHHHHHHHHHHhhhc
Q psy10623 93 RLLDAEDVDTTRPDEKSVITYVASYYHTFARM 124 (216)
Q Consensus 93 ~lLdpeDv~~~~pDeksimtYvs~~y~~f~~~ 124 (216)
+-..||||.+ .|-||.+-- +|+-|.+.
T Consensus 336 p~~rpeDIvN--~D~KSTLRv---Ly~LFtKy 362 (365)
T KOG3631|consen 336 PKVRPEDIVN--KDLKSTLRV---LYNLFTKY 362 (365)
T ss_pred CCCChHHhhc--ccHHHHHHH---HHHHHHhh
Confidence 5778999975 476887654 45555554
No 15
>KOG2046|consensus
Probab=94.08 E-value=0.21 Score=42.81 Aligned_cols=96 Identities=18% Similarity=0.288 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHHhhCCCCCcc-cCCCCCccccchhhHHHHHHhCCCCCCC--CCCCcccHHhhHHHHHHHHHHhcCCCC-
Q psy10623 18 SAKDALLLWCQRKTNGYPGVN-IQDFTGSWRSGLGFNALIHAHRPDLIDF--SQLQPTRHIDNLNNAFDVASTELGIPR- 93 (216)
Q Consensus 18 sak~~LL~Wcq~~t~~Y~~v~-V~nFstSW~DG~Af~ALIh~~rPdlid~--~~L~~~~~~enl~~Af~vAe~~LgIp~- 93 (216)
-....|+.|+..... .+.. -.||..-.+||..||-||+...|..... .+-..=.-.||+..=+..| +.+|++.
T Consensus 25 ~~~~el~~WI~~~~~--~~~~~~~~f~~~LKDG~iLCkl~N~l~p~~~~~~~~s~~~f~qmEnIs~Fi~a~-~~ygv~~~ 101 (193)
T KOG2046|consen 25 ELEKELREWIENVVL--TELPARGDFQDLLKDGVILCKLINKLYPGVVKKINESKMAFVQMENISNFIKAA-KKYGVPEV 101 (193)
T ss_pred HHHHHHHHHHHHhhc--cCCCcccCHHHHHcchHHHHHHHHHhCcCcccccccccccHHHHHHHHHHHHHH-HhcCCChh
Confidence 356789999998421 1233 5799999999999999999999954422 3322335667776655544 5899974
Q ss_pred -CCCcccCCCCCCChhHHHHHHHHH
Q psy10623 94 -LLDAEDVDTTRPDEKSVITYVASY 117 (216)
Q Consensus 94 -lLdpeDv~~~~pDeksimtYvs~~ 117 (216)
+...-|+-.+. |.-.|..-+..+
T Consensus 102 d~FqtvDLfE~k-d~~~V~vtL~aL 125 (193)
T KOG2046|consen 102 DLFQTVDLFEGK-DMAQVQVTLLAL 125 (193)
T ss_pred hcccccccccCC-CHHHHHHHHHHH
Confidence 45555653333 333444344333
No 16
>KOG3000|consensus
Probab=88.76 E-value=1.1 Score=40.85 Aligned_cols=94 Identities=15% Similarity=0.303 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCCc--------ccHHhhHHHHHHHHHHhcC
Q psy10623 19 AKDALLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQP--------TRHIDNLNNAFDVASTELG 90 (216)
Q Consensus 19 ak~~LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~~--------~~~~enl~~Af~vAe~~Lg 90 (216)
.+..+|.|++..+..- -..|...-+ |-|.|-|.+...|..|..+.+.- -...+.+|.+|. .+|
T Consensus 16 sR~E~laW~N~~l~~n-~~kIEe~~t----Gaaycqlmd~l~p~~i~lkkVkf~A~~Ehe~i~Nfk~lQ~~f~----klg 86 (295)
T KOG3000|consen 16 SRLEILAWINDLLQLN-LTKIEELCT----GAAYCQLMDMLFPPDIPLKKVKFAARLEHEYIPNFKVLQTCFN----KLG 86 (295)
T ss_pred chHHHHHHHHhhhhcc-hhhhhhhcc----cchhhhhhhhccCCccccccccccccccchhhhhhHHHHHHHH----hcC
Confidence 4566789999876321 235555555 89999999999998886666541 234455555554 899
Q ss_pred CCCCCCcccCCCCCCChhHHHHHHHHHHHHhhh
Q psy10623 91 IPRLLDAEDVDTTRPDEKSVITYVASYYHTFAR 123 (216)
Q Consensus 91 Ip~lLdpeDv~~~~pDeksimtYvs~~y~~f~~ 123 (216)
|.+.++++++..+.. .-.+.|+-.|.++|-.
T Consensus 87 i~k~v~vdkLvKg~~--qDNlEF~qWfkkffd~ 117 (295)
T KOG3000|consen 87 IDKVVDVDKLVKGPF--QDNLEFLQWFKKFFDA 117 (295)
T ss_pred CcccccHHHHhcccc--cchHHHHHHHHHHhhc
Confidence 999999999765444 3345565555555544
No 17
>KOG2996|consensus
Probab=83.55 E-value=0.77 Score=45.58 Aligned_cols=84 Identities=20% Similarity=0.313 Sum_probs=64.0
Q ss_pred CcccCCCCCccccchhhHHHHHHhCCCCCCCCCCCcc------cHHhhHHHHHHHHHHhcCCC--CCCCcccCCCCCCCh
Q psy10623 36 GVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQPT------RHIDNLNNAFDVASTELGIP--RLLDAEDVDTTRPDE 107 (216)
Q Consensus 36 ~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~~~------~~~enl~~Af~vAe~~LgIp--~lLdpeDv~~~~pDe 107 (216)
+-.|-+|..-.|||..+|-|+|..+|..||...+.-. =...|++.-+....+.+|.. -|++|.|+- ..-|-
T Consensus 27 ~a~v~dlAq~LRDGvLLCqLlnnL~p~sIdlkeIn~rpQmSqFLClkNIrtFl~~C~~~Fglr~seLF~afDLf-dv~dF 105 (865)
T KOG2996|consen 27 SAQVFDLAQALRDGVLLCQLLNNLVPHSIDLKEINLRPQMSQFLCLKNIRTFLMFCCEKFGLRDSELFEAFDLF-DVRDF 105 (865)
T ss_pred cchHHHHHHHHhhhhHHHHHHhhcCCCcccHHHhhcCCCccchhhHhhHHHHHHHHHHHhCCchhhhcchhhhh-hhhhH
Confidence 4457778888899999999999999999988775422 25678888788888899996 489999963 23466
Q ss_pred hHHHHHHHHHHHH
Q psy10623 108 KSVITYVASYYHT 120 (216)
Q Consensus 108 ksimtYvs~~y~~ 120 (216)
..|+.-||.+-++
T Consensus 106 gKVi~tlS~LS~t 118 (865)
T KOG2996|consen 106 GKVIKTLSRLSHT 118 (865)
T ss_pred HHHHHHHHHhccC
Confidence 6777777766543
No 18
>KOG0517|consensus
Probab=79.45 E-value=4.3 Score=45.12 Aligned_cols=99 Identities=11% Similarity=0.226 Sum_probs=73.2
Q ss_pred HHHHHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCC--cccHHhhHHHHHHHHHH-hcCCCCCCC
Q psy10623 20 KDALLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQ--PTRHIDNLNNAFDVAST-ELGIPRLLD 96 (216)
Q Consensus 20 k~~LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~--~~~~~enl~~Af~vAe~-~LgIp~lLd 96 (216)
|+..-+|||.+.+.- +..|.|+=++-+||+-+.-|+.-+..+.++.-.-- .-..++|+..|++.-.+ +..+ ..+-
T Consensus 50 KKTFTKWvNShL~rv-~c~I~DLy~DlrDG~~LlkLLEvlSGE~LpkPtrGRMRIH~LENvdKaLqFLkeqkVhL-EniG 127 (2473)
T KOG0517|consen 50 KKTFTKWVNSHLARV-SCRIGDLYTDLRDGIMLLKLLEVLSGERLPKPTRGRMRIHCLENVDKALQFLKEQKVHL-ENIG 127 (2473)
T ss_pred HHhHHHHHHHHHHHh-cchhHHHHHHHhhhHHHHHHHHHHccccCCCCCCCceeehhHhhhHHHHHHHHhccccc-ccCC
Confidence 566778999999665 88999999999999999999998887766422111 23678999999998864 3333 3567
Q ss_pred cccCCCCCCChhHHHHHHHHHHHHhh
Q psy10623 97 AEDVDTTRPDEKSVITYVASYYHTFA 122 (216)
Q Consensus 97 peDv~~~~pDeksimtYvs~~y~~f~ 122 (216)
++||+.+++ +.|+..|=.+.--|.
T Consensus 128 shDIVDGN~--rL~LGLIWTIILRFQ 151 (2473)
T KOG0517|consen 128 SHDIVDGNH--RLILGLIWTIILRFQ 151 (2473)
T ss_pred cccccCCcc--hhhHHHHHHHHHhee
Confidence 899987765 777776666555453
No 19
>COG5199 SCP1 Calponin [Cytoskeleton]
Probab=60.94 E-value=21 Score=29.88 Aligned_cols=104 Identities=14% Similarity=0.291 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHHhhCCCCCc-ccCCCCCccccchhhHHHHHHhCCCCCCCCCCC-cccHHhhHHHHHHHHHHhcCCCC--
Q psy10623 18 SAKDALLLWCQRKTNGYPGV-NIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQ-PTRHIDNLNNAFDVASTELGIPR-- 93 (216)
Q Consensus 18 sak~~LL~Wcq~~t~~Y~~v-~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~-~~~~~enl~~Af~vAe~~LgIp~-- 93 (216)
.+.+..-.|+-..... .+ +--||.+..+||..||-+++.-.|.-|.|.+-. +=-..+|+..-++.+ +++++|.
T Consensus 13 ~~~kev~~Wie~~l~~--k~~ppgdll~~lkdGv~lCril~ea~~~~I~yKeSkmpFVQmenIs~Fin~~-~k~~vpe~e 89 (178)
T COG5199 13 KQQKEVTLWIETVLGE--KFEPPGDLLSLLKDGVRLCRILNEASPLDIKYKESKMPFVQMENISSFINGL-KKLRVPEYE 89 (178)
T ss_pred HHHHHHHHHHHHHHHh--hhCCcccHHHHHhcchHHHHHHhhcCcccceecccCCceeeHHHHHHHHHHH-HHhCCCHHH
Confidence 3556777899876531 23 336889999999999999999999999887643 334567887777777 4788863
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHHhhhcc
Q psy10623 94 LLDAEDVDTTRPDEKSVITYVASYYHTFARMK 125 (216)
Q Consensus 94 lLdpeDv~~~~pDeksimtYvs~~y~~f~~~~ 125 (216)
+..-.|+- +.-|..-|.--+-.|-.|..++.
T Consensus 90 lFQT~DLF-E~kd~~qV~~~l~slSRya~K~~ 120 (178)
T COG5199 90 LFQTNDLF-EAKDLRQVVICLYSLSRYAQKER 120 (178)
T ss_pred HHHhhhHH-hhcCHHHHHHHHHHHHHHHHHhc
Confidence 34444542 23454555555555555555443
No 20
>KOG0532|consensus
Probab=51.75 E-value=6.9 Score=39.15 Aligned_cols=85 Identities=20% Similarity=0.337 Sum_probs=51.4
Q ss_pred cCCCHHHHHHHHHHHhhCCCCCcc-cCCCCCccccchhhHHHHHHhCCCCCC--------CCCCCcccHHhhHHHHHHHH
Q psy10623 15 EKKSAKDALLLWCQRKTNGYPGVN-IQDFTGSWRSGLGFNALIHAHRPDLID--------FSQLQPTRHIDNLNNAFDVA 85 (216)
Q Consensus 15 ~~~sak~~LL~Wcq~~t~~Y~~v~-V~nFstSW~DG~Af~ALIh~~rPdlid--------~~~L~~~~~~enl~~Af~vA 85 (216)
++..-+..|+.=.+....-.-.+. -.||..-..||..+|.|+++.||-.+. ..+|+-.....|++.=++ |
T Consensus 569 ~q~~eE~eL~~QLRk~iEtRLk~sLp~Dl~aALtDGViLChLaN~lRPRSV~SIHVPSPaV~klsmarcrrNVdnFLe-a 647 (722)
T KOG0532|consen 569 IQNREEKELMLQLRKLIETRLKVSLPEDLAAALTDGVILCHLANHLRPRSVASIHVPSPAVPKLSMARCRRNVDNFLE-A 647 (722)
T ss_pred ccchHHHHHHHHHHHHHHHHhcccCchhHHHHhhcchhhHhhhcccCCCCccceecCCCccchhHHHHHHHhHHHHHH-H
Confidence 334445555544444432111222 368899999999999999999995431 223333455566665455 4
Q ss_pred HHhcCCCC--CCCcccC
Q psy10623 86 STELGIPR--LLDAEDV 100 (216)
Q Consensus 86 e~~LgIp~--lLdpeDv 100 (216)
-+++|+|- +.+|.||
T Consensus 648 CRkiGVpEa~lCS~~Di 664 (722)
T KOG0532|consen 648 CRKIGVPEADLCSPMDI 664 (722)
T ss_pred HHHcCCChHhhcCHHHh
Confidence 57899973 5566665
No 21
>KOG3631|consensus
Probab=51.15 E-value=33 Score=31.38 Aligned_cols=101 Identities=9% Similarity=0.200 Sum_probs=75.0
Q ss_pred HHHHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCCCCCCC--cccHHhhHHHHHHHHHHhcCCCCCC---
Q psy10623 21 DALLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLIDFSQLQ--PTRHIDNLNNAFDVASTELGIPRLL--- 95 (216)
Q Consensus 21 ~~LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid~~~L~--~~~~~enl~~Af~vAe~~LgIp~lL--- 95 (216)
+.|+.|.|....+- .+-|..+..+-.||..+--|..+...--+....+. .....+-++.+++.+.+.|+.|.--
T Consensus 93 kvLi~WiN~~L~~e-rIvVr~LeEDlfDGqilqkL~ekL~~~klev~evtqse~~QkqKLq~Vleavnr~L~~~~~q~kW 171 (365)
T KOG3631|consen 93 KVLIDWINDVLVPE-RIVVRSLEEDLFDGQILQKLFEKLAALKLEVAEVTQSEIGQKQKLQTVLEAVNRSLQLPEWQAKW 171 (365)
T ss_pred HHHHHHHHHhhcch-hhhHHhhHHhhhhhHHHHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHHhcCchhhhcc
Confidence 67899999998876 67899999999999999999988866555555443 4466778999999999999987532
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHHhhhc
Q psy10623 96 DAEDVDTTRPDEKSVITYVASYYHTFARM 124 (216)
Q Consensus 96 dpeDv~~~~pDeksimtYvs~~y~~f~~~ 124 (216)
+++-|. +-|-.+|+-.+..+-.+|...
T Consensus 172 svdsIh--~Kdl~ailhLLVaLa~~frap 198 (365)
T KOG3631|consen 172 SVDSIH--NKDLVAILHLLVALAKHFRAP 198 (365)
T ss_pred chhhhc--cchHHHHHHHHHHHHHHcCCC
Confidence 233333 346677777777666666543
No 22
>cd08540 SAM_PNT-ERG Sterile alpha motif (SAM)/Pointed domain of ERG transcription factor. SAM Pointed domain of ERG subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It may participate in formation of homodimers or heterodimers with ETS-2, Fli-1, ER81, and Pu-1. However, dimeric forms are inactive and SAM Pointed domain is not essential for dimerization, since ER81 and Pu-1 do not have it. In mouse, a regulator of this type binds the ESET histone H3-specific methyltransferase (human homolog is SETDB1), followed by modification of local chromatin structure through histone methylation. ERG regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. The Erg gene is a proto-oncogene. It is a target of chromosomal translocations resulting in fusions with new neighboring genes. Chimeric proteins were found in solid tumors such as myeloid leukemia or Ewing's sarcoma. Members of this subfamily are po
Probab=45.35 E-value=17 Score=26.44 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=21.2
Q ss_pred HHHHHHHHHhhCCCCCcccCCCCCcc--ccchhhHHHHH
Q psy10623 21 DALLLWCQRKTNGYPGVNIQDFTGSW--RSGLGFNALIH 57 (216)
Q Consensus 21 ~~LL~Wcq~~t~~Y~~v~V~nFstSW--~DG~Af~ALIh 57 (216)
+....|++-.++.| ++.-.|++ .| -+|.++|+|=+
T Consensus 11 ~~V~~WL~Wa~~ef-~L~~~~~~-~F~~m~Gk~LC~Lsk 47 (75)
T cd08540 11 DHVRQWLEWAVKEY-GLPDVDVL-LFQNIDGKELCKMTK 47 (75)
T ss_pred HHHHHHHHHHHHHh-CCCCCCcc-cccCCCHHHHHhCCH
Confidence 44556766666666 34333332 35 38999999644
No 23
>cd08542 SAM_PNT-ETS-1 Sterile alpha motif (SAM)/Pointed domain of ETS-1. SAM Pointed domain of ETS-1 subfamily of ETS transcriptional activators is a protein-protein interaction domain. The ETS-1 activator is regulated by phosphorylation. It contains a docking site for the ERK2 MAP (Mitogen Activated Protein) kinase, while the ERK2 phosphorylation site is located in the N-terminal disordered region upstream of the SAM Pointed domain. Mutations of the kinase docking site residues inhibit phosphorylation. ETS-1 activators play role in a number of different physiological processes, and they are expressed during embryonic development, including blood vessel formation, hematopoietic, lymphoid, neuronal and osteogenic differentiation. The Ets-1 gene is a proto-oncogene involved in progression of different tumors (including breast cancer, meningioma, and prostate cancer). Members of this subfamily are potential molecular targets for selective cancer therapy.
Probab=40.93 E-value=22 Score=26.81 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=22.5
Q ss_pred HHHHHHHHHhhCCC--CCcccCCCCCccccchhhHHHHH
Q psy10623 21 DALLLWCQRKTNGY--PGVNIQDFTGSWRSGLGFNALIH 57 (216)
Q Consensus 21 ~~LL~Wcq~~t~~Y--~~v~V~nFstSW~DG~Af~ALIh 57 (216)
.....|.+-.++.| +++++.+|. -||.++|+|=+
T Consensus 25 ~~V~~WL~Wa~~ef~L~~i~~~~F~---m~Gk~LC~Ls~ 60 (88)
T cd08542 25 THVRDWVMWAVNEFSLKGVDFQKFC---MNGAALCALGK 60 (88)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccCC---CCHHHHHcCCH
Confidence 34455555444444 477888884 79999999754
No 24
>cd08541 SAM_PNT-FLI-1 Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator. SAM Pointed domain of FLI-1 (Friend Leukemia Integration) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The FLI-1 protein participates in regulation of cellular differentiation, proliferation, and survival. The Fli-1 gene was initially described in Friend virus-induced erythroleukemias as a site for virus integration. It is highly expressed in hematopoietic tissues and at lower level in lungs, heart, and ovaries. Fli-1 is a proto-oncogene implicated in Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy.
Probab=39.33 E-value=24 Score=26.72 Aligned_cols=36 Identities=11% Similarity=0.229 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhhCCC--CCcccCCCCCccccchhhHHHHH
Q psy10623 20 KDALLLWCQRKTNGY--PGVNIQDFTGSWRSGLGFNALIH 57 (216)
Q Consensus 20 k~~LL~Wcq~~t~~Y--~~v~V~nFstSW~DG~Af~ALIh 57 (216)
++....|++-.++.| +++.+.+|. =-||.++|+|=+
T Consensus 22 ~~hV~~WL~Wa~~ef~L~~vd~~~F~--~m~Gk~LC~Lsk 59 (91)
T cd08541 22 QEHVRQWLEWAIKEYGLMEIDTSFFQ--NMDGKELCKMNK 59 (91)
T ss_pred HHHHHHHHHHHHHHcCCCCCChhhcc--CCCHHHHHhCCH
Confidence 345566776666656 244444442 038999999644
No 25
>cd08543 SAM_PNT-ETS-2 Sterile alpha motif (SAM)/Pointed domain of ETS-2. SAM Pointed domain of ETS-2 subfamily of ETS transcriptional regulators is a protein-protein interaction domain. It contains a docking site for Cdk10 (cyclin-dependent kinase 10), a member of the Cdc2 kinase family. The interaction between ETS-2 and Cdk10 kinase inhibits ETS-2 transactivation activity in mammals. ETS-2 is also regulated by ERK2 MAP kinase. ETS-2, which is phosphorylated by ERK2, can interact with coactivators and enhance transactivation. ETS-2 transcriptional activators are involved in embryonic development and cell cycle control. The Ets-2 gene is a proto-oncogene. It is overexpressed in breast and prostate cancer cells and its overexpression is necessary for transformation of such cells. Members of ETS-2 subfamily are potential molecular targets for selective cancer therapy.
Probab=36.52 E-value=29 Score=26.24 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=22.7
Q ss_pred HHHHHHHHHhhCCC--CCcccCCCCCccccchhhHHHHH
Q psy10623 21 DALLLWCQRKTNGY--PGVNIQDFTGSWRSGLGFNALIH 57 (216)
Q Consensus 21 ~~LL~Wcq~~t~~Y--~~v~V~nFstSW~DG~Af~ALIh 57 (216)
.....|.+-.+..| +++++.+|. -+|+++|+|=+
T Consensus 25 ~~V~~WL~Wa~~ef~L~~i~~~~F~---m~Gk~LC~Ls~ 60 (89)
T cd08543 25 QQVCQWLLWATNEFSLVNVNFQQFG---MNGQELCNLGK 60 (89)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccCC---CChHHHHcCCH
Confidence 34445555444444 477888885 68999999754
No 26
>PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain.
Probab=33.25 E-value=36 Score=25.69 Aligned_cols=61 Identities=21% Similarity=0.326 Sum_probs=34.8
Q ss_pred CCCCCccccchhhHHHHHHhCCCC-CCCCC--CCcccHHhhHHHHHHHH-HHhcCCC--CCCCcccC
Q psy10623 40 QDFTGSWRSGLGFNALIHAHRPDL-IDFSQ--LQPTRHIDNLNNAFDVA-STELGIP--RLLDAEDV 100 (216)
Q Consensus 40 ~nFstSW~DG~Af~ALIh~~rPdl-id~~~--L~~~~~~enl~~Af~vA-e~~LgIp--~lLdpeDv 100 (216)
+-....++-|..||+|-+...|+. ++.+. .+..+..+..-.=|-.| .++||+| .++...|+
T Consensus 4 t~LW~~fr~G~PLc~lfNal~p~~~L~v~~~~~~~~k~~K~ai~~Fi~ack~~L~~~~~e~FtIsdl 70 (89)
T PF06395_consen 4 TQLWKLFRQGYPLCVLFNALQPEEPLPVDPVSSDDLKVCKKAIYKFIQACKQELGFPDEELFTISDL 70 (89)
T ss_pred HHHHHHHhCcCcHHHHHHccCCccCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCccceeeeecc
Confidence 334456789999999999999984 44422 22222222222222222 3578886 34555665
No 27
>PF15546 DUF4653: Domain of unknown function (DUF4653)
Probab=32.89 E-value=62 Score=28.26 Aligned_cols=39 Identities=31% Similarity=0.538 Sum_probs=25.6
Q ss_pred chhHHHhhhhHHHHH-----------HHHHHHHHHHHHhHHH-------HHHHhhhccc
Q psy10623 175 MNQIVSQMMDADKKK-----------MMYERLNRDLLEYLPV-------YHARKNNLFD 215 (216)
Q Consensus 175 ~~~~~~~~~~~~~l~-----------~~ye~~~~~ll~wi~~-------~~~~~~~~~~ 215 (216)
|.+-+.+|++-++.+ -+|.++| ||.||+- ...|+.+-||
T Consensus 158 va~Avq~Lq~~Er~KeqEkEKHhv~LvMYRRLA--Ll~Wir~LQ~~~~dQQ~RLQeSFD 214 (239)
T PF15546_consen 158 VAEAVQQLQAQERYKEQEKEKHHVHLVMYRRLA--LLRWIRGLQHQLVDQQNRLQESFD 214 (239)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777666654 4687776 8999985 3455555555
No 28
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms. The different members of the Homo sapiens gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three Homo sapiens HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas the central coiled-coil motif mediates homodimerisation and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes [], whereas both HOOK1 and HOOK2 are localised to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head [].; GO: 0008017 microtubule binding, 0000226 microtubule cytoskeleton organization, 0005737 cytoplasm; PDB: 1WIX_A.
Probab=32.71 E-value=50 Score=33.28 Aligned_cols=44 Identities=16% Similarity=0.413 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHHhCCCCCC
Q psy10623 18 SAKDALLLWCQRKTNGYPGVNIQDFTGSWRSGLGFNALIHAHRPDLID 65 (216)
Q Consensus 18 sak~~LL~Wcq~~t~~Y~~v~V~nFstSW~DG~Af~ALIh~~rPdlid 65 (216)
..-..|+.|++.-- .+-++.++. +..||.+|.-++|.+.|.-++
T Consensus 7 ~l~~~Lv~Wv~tf~---~~~~~~~~~-dL~DGv~L~evL~qIDp~~F~ 50 (713)
T PF05622_consen 7 ELCDSLVTWVQTFN---LSAPCSSYE-DLSDGVALAEVLHQIDPEYFN 50 (713)
T ss_dssp HHHHHHHHHHTT------SS---SHH-HHTTSHHHHHHHHHH-TTTS-
T ss_pred hHHHHHHHHHHHCC---CCCCcCCHH-HccchHHHHHHHHHhCccccC
Confidence 35578999998642 123455553 689999999999999999775
No 29
>cd08534 SAM_PNT-GABP-alpha Sterile alpha motif (SAM)/Pointed domain of GA-binding protein alpha chain. SAM Pointed domain of GABP-alpha subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. This type of transcriptional regulators forms heterotetramers containing two alpha and two beta subunits. It interacts with GA repeats (purine rich repeats). GABP transcriptional factors control gene expression in cell cycle control, apoptosis, and cellular respiration. GABP participates in regulation of transmembrane receptors and key hormones especially in myeloid cells and at the neuromuscular junction.
Probab=30.60 E-value=37 Score=25.58 Aligned_cols=35 Identities=17% Similarity=0.490 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhhCCC--CCcccCCCCCccccchhhHHHHH
Q psy10623 20 KDALLLWCQRKTNGY--PGVNIQDFTGSWRSGLGFNALIH 57 (216)
Q Consensus 20 k~~LL~Wcq~~t~~Y--~~v~V~nFstSW~DG~Af~ALIh 57 (216)
++....|++-.++.| +++++.+|. -||.++|+|=+
T Consensus 24 ~~~V~~WL~Wa~~ef~L~~v~~~~F~---m~Gk~LC~Ls~ 60 (89)
T cd08534 24 EDQVLHWVVWAVKEFSLTDIDLSDWN---ITGRELCSLTQ 60 (89)
T ss_pred HHHHHHHHHHHHHHcCCCCCChhhcC---CCHHHHhcCCH
Confidence 345566776666555 366678885 49999999644
No 30
>KOG3170|consensus
Probab=25.12 E-value=40 Score=29.58 Aligned_cols=18 Identities=28% Similarity=0.562 Sum_probs=14.9
Q ss_pred cccchhhHHHHHHhCCCC
Q psy10623 46 WRSGLGFNALIHAHRPDL 63 (216)
Q Consensus 46 W~DG~Af~ALIh~~rPdl 63 (216)
+.+|+++|+||++|.-.+
T Consensus 119 y~~gvp~c~Ll~~~l~~l 136 (240)
T KOG3170|consen 119 YKQGVPLCALLSHHLQSL 136 (240)
T ss_pred eccccHHHHHHHHHHHHH
Confidence 489999999999986443
No 31
>cd08535 SAM_PNT-Tel_Yan Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein. SAM Pointed domain of Tel (Translocation, Ets, Leukemia)/Yan subfamily of ETS transcriptional repressors is a protein-protein interaction domain. SAM Pointed domains of this type of regulators can interact with each other, forming head-to-tail homodimers or homooligomers, and/or interact with SAM Pointed domains of another subfamily of ETS factors forming heterodimers. The oligomeric form is able to block transcription of target genesand is involved in MAPK signaling. They participate in regulation of different processes during embryo development including hematopoietic differentiation and eye development. Tel/Yan transcriptional factors are frequent targets of chromosomal translocations resulting in fusions of SAM domain with new neighboring genes. Such chimeric proteins were found in different tumors. Members of this subfamily are potential targets for cancer therapy.
Probab=23.91 E-value=66 Score=22.90 Aligned_cols=34 Identities=24% Similarity=0.521 Sum_probs=22.2
Q ss_pred HHHHHHHHHhhCCC--CCcccCCCCCccccchhhHHHHH
Q psy10623 21 DALLLWCQRKTNGY--PGVNIQDFTGSWRSGLGFNALIH 57 (216)
Q Consensus 21 ~~LL~Wcq~~t~~Y--~~v~V~nFstSW~DG~Af~ALIh 57 (216)
+....|++-.++.| +++.+.+|. -||.++|++=+
T Consensus 9 ~~V~~WL~wa~~ef~L~~i~~~~F~---mnGk~LC~ls~ 44 (68)
T cd08535 9 DDVLQWLRWAENEFSLPPIDSNTFE---MNGKALCLLTK 44 (68)
T ss_pred HHHHHHHHHHHHhcCCCCCChhccC---CCHHHHhcCCH
Confidence 33455666555555 356667774 68999999644
No 32
>cd08757 SAM_PNT_ESE Sterile alpha motif (SAM)/Pointed domain of ESE-like ETS transcriptional regulators. SAM Pointed domain of ESE-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. ETS factors are important for cell differentiation. They can be involved in regulation of gene expression in different types of epithelial cells. They are expressed in salivary gland, intestine, stomach, pancreas, lungs, kidneys, colon, mammary gland, and prostate. Members of this group are proto-oncogenes. Expression profiles of these factors are altered in epithelial cancers, which makes them potential targets for cancer therapy.
Probab=23.52 E-value=67 Score=22.69 Aligned_cols=34 Identities=18% Similarity=0.329 Sum_probs=22.2
Q ss_pred HHHHHHHHHhhCCC--C--CcccCCCCCccccchhhHHHHH
Q psy10623 21 DALLLWCQRKTNGY--P--GVNIQDFTGSWRSGLGFNALIH 57 (216)
Q Consensus 21 ~~LL~Wcq~~t~~Y--~--~v~V~nFstSW~DG~Af~ALIh 57 (216)
+-.+.|++..++.| + ++.+.+|. -||.++|.+=+
T Consensus 8 ~~V~~Wl~w~~~e~~l~~~~i~~~~F~---m~Gk~LC~ms~ 45 (68)
T cd08757 8 NDVLEWLQFVAEQNKLDAECISFQKFN---IDGQTLCSMTE 45 (68)
T ss_pred HHHHHHHHHHHHHcCCCCCcCCccccC---CCHHHHHcCCH
Confidence 44567777666443 2 35667773 58999998644
No 33
>cd08537 SAM_PNT-ESE-1-like Sterile alpha motif (SAM)/Pointed domain of ESE-1 like ETS transcriptional regulators. SAM Pointed domain of ESE-1-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. SAM Pointed domain of ESE-1 provides a potential docking site for signaling kinase Pak1 in humans. ESE-1 factors are involved in regulation of gene expression in different types of epithelial cells. ESE-1 is expressed in many different organs including intestine, stomach, pancreas, lungs, kidneys, and prostate. The DNA binding consensus motif for ESE-1 consists of a purine-rich GGA[AT] core sequence. The expression profile of these factors is altered in epithelial cancers if compared to normal tissues. Members of this subfamily are potential targets for cancer therapy.
Probab=22.76 E-value=66 Score=23.77 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhC--CC--CCcccCCCCCccccchhhHHHHH
Q psy10623 19 AKDALLLWCQRKTN--GY--PGVNIQDFTGSWRSGLGFNALIH 57 (216)
Q Consensus 19 ak~~LL~Wcq~~t~--~Y--~~v~V~nFstSW~DG~Af~ALIh 57 (216)
-|...+.|++..+. .| .+|.+.+| ==||.++|.+=.
T Consensus 14 tk~qVleWL~~~~e~n~~dl~~v~f~~F---~MnG~~LC~l~~ 53 (78)
T cd08537 14 TKTQVLEWISYHVEKNKYDASSIDFSRC---DMDGATLCNCAL 53 (78)
T ss_pred cHHHHHHHHHHHHHhccCCcccCCHHHh---CCchHHHHccCH
Confidence 46778999999883 35 25556666 458999998643
No 34
>cd08203 SAM_PNT Sterile alpha motif (SAM)/Pointed domain. Sterile alpha motif (SAM)/Pointed domain is found in about 40% of transcriptional regulators of ETS family (initially named for Erythroblastosis virus, E26-E Twenty Six). SAM Pointed domain containing proteins of this family additionally have C-terminal ETS DNA-binding domain. In a few cases, SAM Pointed domain appears as a single domain protein. Members of this group are mostly involved in regulation of embryonic development and growth control in eukaryotes. SAM Pointed domains mediate protein-protein interactions. Depending on the subgroup, they can interact with other SAM Pointed domains forming homo or hetero dimers/oligomers and/or they can recruit a protein kinase to its target which can be the SAM Pointed domain containing protein itself or another protein that has no kinase docking site. Thus, SAM Pointed domains participate in transcriptional regulation and signal transduction. Some genes coding ETS family transcripti
Probab=22.25 E-value=77 Score=22.13 Aligned_cols=33 Identities=18% Similarity=0.459 Sum_probs=22.0
Q ss_pred HHHHHHHHHhhCCC--CCcccCCCCCccccchhhHHHH
Q psy10623 21 DALLLWCQRKTNGY--PGVNIQDFTGSWRSGLGFNALI 56 (216)
Q Consensus 21 ~~LL~Wcq~~t~~Y--~~v~V~nFstSW~DG~Af~ALI 56 (216)
+..+.|++...+.| +.+.+.+| =-||.++|.+=
T Consensus 8 ~~V~~Wl~w~~~~f~L~~~~~~~F---~m~G~~Lc~ls 42 (66)
T cd08203 8 EHVLQWLEWAVKEFSLPPIDFSKF---NMNGKELCLLT 42 (66)
T ss_pred HHHHHHHHHHHHhcCCCCCChhhc---CCCHHHHHhCC
Confidence 44567777766655 34566677 35899999863
No 35
>cd08539 SAM_PNT-ESE-3-like Sterile alpha motif (SAM)/Pointed domain of ESE-3 like ETS transcriptional regulators. SAM Pointed domain of ESE-3-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. The ESE-3 transcriptional activator is involved in regulation of glandular epithelium differentiation through the MAP kinase signaling cascade. It is found to be expressed in glandular epithelium of prostate, pancreas, salivary gland, and trachea. Additionally, ESE-3 is differentially expressed during monocyte-derived dendritic cells development. DNA binding consensus motif for ESE-3 consists of purine-rich GGAA/T core sequence. The expression profiles of these factors are altered in epithelial cancers. Members of this subfamily are potential targets for cancer therapy.
Probab=21.09 E-value=52 Score=24.07 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhhCCCCCcccC--CCCCccccchhhHHHH
Q psy10623 20 KDALLLWCQRKTNGYPGVNIQ--DFTGSWRSGLGFNALI 56 (216)
Q Consensus 20 k~~LL~Wcq~~t~~Y~~v~V~--nFstSW~DG~Af~ALI 56 (216)
|.-.+.|++..++-| .+... +|..-==||.++|.+=
T Consensus 10 k~~V~~WL~~~~~~~-~~~~~~i~~~~F~MnG~~LC~ms 47 (74)
T cd08539 10 KYQVWEWLQHLLDTN-QLDASCIPFQEFDINGEHLCSMS 47 (74)
T ss_pred HHHHHHHHHHHHHHc-CCCcccccHHHcCCChHHHHccC
Confidence 566788988884433 23322 3333346899999863
No 36
>PF01372 Melittin: Melittin; InterPro: IPR002116 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an Arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 3. Melittin is the principal protein component of the venom of the honeybee, Apis mellifera. It inhibits protein kinase C, Ca2+/calmodulin-dependent protein kinase II, myosin light chain kinase and Na+/K+-ATPase (synaptosomal membrane) and is a cell membrane lytic factor. Melittin is a small peptide with no disulphide bridge; the N-terminal part of the molecule is predominantly hydrophobic and the C-terminal part is hydrophilic and strongly basic. The molecular mechanisms underlying the various effects of melittin on membranes have not been completely defined and much of the evidence indicates that different molecular mechanisms may underlie different actions of the peptide []. Extensive work with melittin has shown that the venom has multiple effects, probably, as a result of its interaction with negatively changed phospholipids. It inhibits well known transport pumps such as the Na+-K+-ATPase and the H+-K+-ATPase. Melittin increases the permeability of cell membranes to ions, particularly Na+ and indirectly Ca2+, because of the Na+-Ca2+-exchange. This effect results in marked morphological and functional changes, particularly in excitable tissues such as cardiac myocytes. In some other tissues, e.g., cornea, not only Na+ but Cl- permeability is also increased by melittin. Similar effects to melittin on H+-K+-ATPase have been found with the synthetic amphipathic polypeptide Trp-3 []. The study of melittin in model membranes has been useful for the development of methodology for determination of membrane protein structures. A molecular dynamics simulation of melittin in a hydrated dipalmitoylphosphatidylcholine (DPPC) bilayer was carried out. The effect of melittin on the surrounding membrane was localised to its immediate vicinity, and its asymmetry with respect to the two layers may be a result of the fact that it is not fully transmembranal. Melittin's hydrophilic C terminus anchors it at the extracellular interface, leaving the N terminus "loose" in the lower layer of the membrane [].; GO: 0004860 protein kinase inhibitor activity, 0005576 extracellular region; PDB: 3QRX_B 2MLT_A 1BH1_A.
Probab=20.91 E-value=96 Score=18.12 Aligned_cols=17 Identities=6% Similarity=0.020 Sum_probs=12.5
Q ss_pred HHHHHHHHHHhHHHHHH
Q psy10623 192 YERLNRDLLEYLPVYHA 208 (216)
Q Consensus 192 ye~~~~~ll~wi~~~~~ 208 (216)
.-+..+.|+.||+++..
T Consensus 9 la~~LP~lISWIK~kr~ 25 (26)
T PF01372_consen 9 LATGLPTLISWIKNKRQ 25 (26)
T ss_dssp HHTHHHHHHHHHHHHHH
T ss_pred HHhcChHHHHHHHHHhc
Confidence 34556789999998764
No 37
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=20.04 E-value=1.2e+02 Score=26.76 Aligned_cols=72 Identities=21% Similarity=0.278 Sum_probs=42.2
Q ss_pred chhhHHHHHHhCCCCCC---CCCCCcccHHhhHHHHHHHHHHhcCCCCCCCcccCCCCC----CChhHHHHHHHHHHHHh
Q psy10623 49 GLGFNALIHAHRPDLID---FSQLQPTRHIDNLNNAFDVASTELGIPRLLDAEDVDTTR----PDEKSVITYVASYYHTF 121 (216)
Q Consensus 49 G~Af~ALIh~~rPdlid---~~~L~~~~~~enl~~Af~vAe~~LgIp~lLdpeDv~~~~----pDeksimtYvs~~y~~f 121 (216)
|-++..||+...|+.+= |+.=+..+..+-|+ .++..-+.+||+..+.-+|..... |-+.-=|.|+|.+.|.-
T Consensus 20 ~~~ll~li~~LGp~nv~vSIyE~~S~D~T~~~L~-~L~~~L~~lgv~~~i~~~~~~~~~~~~~~~~~~RI~~LA~lRN~A 98 (241)
T PF11735_consen 20 GDALLELIRFLGPENVFVSIYESGSWDGTKEALR-ALDAELDALGVPHSIVLSDITHRDEIERPPRLRRIEYLAELRNRA 98 (241)
T ss_pred HHHHHHHHHHhCcCeEEEEEEeCCCCccHHHHHH-HHHHHHHhCCCCeEEEeCCCcccccccccchhhhHHHHHHHHhHH
Confidence 34677899999999762 22222233333333 333333689999876665542221 22356688999998743
Done!