RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10626
(344 letters)
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 122
Score = 89.6 bits (221), Expect = 1e-22
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 48 PVEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAAT----SP 103
+G + RKHE S KKA+ RSW +Y + F+KDQ + ++ T
Sbjct: 7 GEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPS 66
Query: 104 IIIFKARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKISFHAQ 156
+ A E A DYTK+KHV R+ +G+ FL A +T M WV + +
Sbjct: 67 YDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSD 119
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein
APS {Mouse (Mus musculus) [TaxId: 10090]}
Length = 136
Score = 84.5 bits (208), Expect = 1e-20
Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 9/134 (6%)
Query: 32 QSFRKLQKLEQLDQLPPVEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQ 91
S K+E +D ++ +G L + W+ +L +
Sbjct: 5 SSGNLAAKVELVD----IQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRL 60
Query: 92 DDFVASKAATSPIIIFKARCE-----KAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMED 146
+ FV KA+ + I + + ++ + F L +G+E++
Sbjct: 61 EFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHS 120
Query: 147 WVNKISFHAQLPPS 160
WV I PS
Sbjct: 121 WVADIQGCVDSGPS 134
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain
[TaxId: 10090]}
Length = 106
Score = 80.9 bits (198), Expect = 1e-19
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 51 IQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAA--TSPIIIFK 108
++G L RKHE ++ KKA+ RSW ++Y V+ Q + F+KD + P+ + +
Sbjct: 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKE 60
Query: 109 ARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKIS 152
A CE A DY K+KHVF+L +DG+E+LF A + M W+ IS
Sbjct: 61 AICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAIS 104
>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2
isoform [TaxId: 9606]}
Length = 123
Score = 79.3 bits (194), Expect = 6e-19
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 49 VEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVA--SKAATSPIII 106
+++G+L RK E+++ GKKAA RSW+++Y VL L F+KD A P+ +
Sbjct: 8 EQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSL 67
Query: 107 FKARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKISFHAQLPPS 160
+A+ A DY KRKHVF+L DG E+LF A E M W+ ++ PS
Sbjct: 68 ARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASGPS 121
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21
{Human (Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 72.4 bits (176), Expect = 2e-16
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 52 QGVLERKHELQSGGKK--AAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIFKA 109
+G L + + GK+ ++R WK +Y VL G L +KD+ + PI +
Sbjct: 4 EGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNAC 63
Query: 110 RCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKISFHAQLPPSLQLLSYDD- 168
+ + TKRK+VFRL T E LF A M W+ I + L ++ D
Sbjct: 64 LIDISYSETKRKNVFRL-TTSDCECLFQAEDRDDMLAWIKTIQESSNLNEEDTGVTNRDL 122
Query: 169 -SQKVSQY 175
S+++ +Y
Sbjct: 123 ISRRIKEY 130
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding
protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 53.4 bits (127), Expect = 9e-10
Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Query: 48 PVEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIF 107
PV I+G L ++ + +R WK + VL G L ++KD + S + + +
Sbjct: 8 PVHIRGWLHKQ-------DSSGLRLWKRRWFVLSGHCLFYYKDSRE--ESVLGSVLLPSY 58
Query: 108 KARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKISFHAQ 156
R + G R+ F ++ A + + W+ + ++
Sbjct: 59 NIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 107
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein
SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 52.6 bits (125), Expect = 1e-09
Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
Query: 52 QGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIFKARC 111
QG LE+K S W+ + V+ L ++ ++ K
Sbjct: 4 QGYLEKK----SKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQP-KGTFLIKGYSVRMA 58
Query: 112 EKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKISF 153
+K++ F L D + F A S DWV++ISF
Sbjct: 59 PHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISF 100
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 54.9 bits (131), Expect = 2e-09
Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 5/109 (4%)
Query: 45 QLPPVEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPI 104
LP V G LE++ W+ + L + ++ D K +
Sbjct: 100 DLPFVIKAGYLEKR----RKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQ-KGEFAID 154
Query: 105 IIFKARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKISF 153
K+ F + D + F A S E+WV ++ F
Sbjct: 155 GYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKF 203
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 111
Score = 50.4 bits (119), Expect = 1e-08
Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 5/108 (4%)
Query: 46 LPPVEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPII 105
LP V G LE++ W+ + L + ++ K +
Sbjct: 6 LPFVIKAGYLEKR----RKDHSFLGFEWQKRWCALSKTVFYYYGSDK-DKQQKGEFAIDG 60
Query: 106 IFKARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKISF 153
K+ F + D + F A S E+WV ++ F
Sbjct: 61 YDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKF 108
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 49.1 bits (116), Expect = 2e-08
Identities = 11/94 (11%), Positives = 31/94 (32%), Gaps = 3/94 (3%)
Query: 66 KKAAVRSWKSLYTVL--CGQLLCFFKDQDDFVASKAAT-SPIIIFKARCEKAGDYTKRKH 122
+ ++WK +L L ++ A ++ G ++ ++
Sbjct: 11 QGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEEN 70
Query: 123 VFRLYCTDGSEFLFLAPSETLMEDWVNKISFHAQ 156
+F + D + A + +W+ I ++
Sbjct: 71 LFEIITADEVHYFLQAATPKERTEWIKAIQMASR 104
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 46.5 bits (109), Expect = 3e-07
Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 17/119 (14%)
Query: 49 VEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIFK 108
G L+++ V++W+ Y VL Q L ++KD++D +
Sbjct: 8 PIKMGWLKKQ-----RSI---VKNWQQRYFVLRAQQLYYYKDEEDTKPQG--CMYLPGCT 57
Query: 109 ARCEKAGDYTKRKHVFRLYCTDGSE-------FLFLAPSETLMEDWVNKISFHAQLPPS 160
+ K VF + + ++ +A S+ ME+WV + A PS
Sbjct: 58 IKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGPS 116
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein
6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 109
Score = 45.5 bits (106), Expect = 5e-07
Identities = 21/113 (18%), Positives = 37/113 (32%), Gaps = 12/113 (10%)
Query: 48 PVEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIF 107
+ G L R K + + WK L+ V+ ++L + +D AA +
Sbjct: 7 GSTMSGYLYRS--------KGSKKPWKHLWFVIKNKVLYTYAASED----VAALESQPLL 54
Query: 108 KARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKISFHAQLPPS 160
D VF+L ++F A + W++ PS
Sbjct: 55 GFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVSGPS 107
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 116
Score = 45.7 bits (107), Expect = 6e-07
Identities = 17/113 (15%), Positives = 37/113 (32%), Gaps = 9/113 (7%)
Query: 46 LPPVEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKA------ 99
L VE+ G + ++ L G K ++WK VL ++
Sbjct: 2 LSTVELSGTVVKQGYLAKQGHK--RKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSL 59
Query: 100 -ATSPIIIFKARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKI 151
+ + + ++F++ D + + A S+ +W+ I
Sbjct: 60 RGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAI 112
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 43.6 bits (102), Expect = 2e-06
Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 66 KKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIFKARCEKAGDYTKRKHVFR 125
+ A +++WK Y L + +FK + + + + C+++ D R ++F
Sbjct: 12 QGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQS-DIMMRDNLFE 70
Query: 126 LYCTDGSEFLFLAPSETLMEDWVNKIS 152
+ T F A S M W+ +S
Sbjct: 71 I-VTTSRTFYVQADSPEEMHSWIKAVS 96
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and
3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 41.3 bits (96), Expect = 1e-05
Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Query: 52 QGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIFKARC 111
+G L ++ GG V++WK+ + L L +FKDQ + + + +
Sbjct: 7 EGYLTKQ-----GGL---VKTWKTRWFTLHRNELKYFKDQMSPEPIRI----LDLTECSA 54
Query: 112 EKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKI 151
+ +R + F F A + ++W+ +
Sbjct: 55 VQFDYSQERVNCFC-LVFPFRTFYLCAKTGVEADEWIKIL 93
>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8
(ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 42.2 bits (98), Expect = 1e-05
Identities = 17/118 (14%), Positives = 36/118 (30%), Gaps = 28/118 (23%)
Query: 66 KKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIFKARCEKAGDYTKRKHVFR 125
+ ++SW L+ VL +L +K Q + +++ + K F+
Sbjct: 16 IRGTLKSWTKLWCVLKPGVLLIYKTQKN----GQWVGTVLLNACEIIERPS-KKDGFCFK 70
Query: 126 LYCTDGSE-----------------------FLFLAPSETLMEDWVNKISFHAQLPPS 160
L+ + A SE+ W++ + + PS
Sbjct: 71 LFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKSGPS 128
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 127
Score = 40.6 bits (94), Expect = 4e-05
Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 24/119 (20%)
Query: 50 EIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVA------------- 96
+ +G L + GG+ V++WK + +L L +F+ D
Sbjct: 6 DREGWLLKL-----GGR---VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIRE 57
Query: 97 ---SKAATSPIIIFKARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKIS 152
+ + + + K + R+ + + APS E+W+ I
Sbjct: 58 VLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIK 116
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 169
Score = 40.2 bits (93), Expect = 9e-05
Identities = 16/129 (12%), Positives = 43/129 (33%), Gaps = 30/129 (23%)
Query: 49 VEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIFK 108
V ++ + ++ KK + ++K +L L +++ + + I + K
Sbjct: 3 VILESIFLKRS---QQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEK 59
Query: 109 ARC--------------------------EKAGDYTKRKHVFRLYCTDGSEFLFLAPSET 142
C E+ + + F++ D +P+E
Sbjct: 60 ITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVV-YDEGPLYVFSPTEE 118
Query: 143 LMEDWVNKI 151
L + W++++
Sbjct: 119 LRKRWIHQL 127
>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 117
Score = 39.2 bits (90), Expect = 9e-05
Identities = 18/116 (15%), Positives = 30/116 (25%), Gaps = 12/116 (10%)
Query: 49 VEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAAT----SPI 104
+G+L +K G + WK+ + VL
Sbjct: 8 RSYEGILYKK-----GAFM---KPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVE 59
Query: 105 IIFKARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKISFHAQLPPS 160
+ T + F T + F A + WV++I PS
Sbjct: 60 AVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSSGPS 115
>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}
Length = 111
Score = 39.2 bits (90), Expect = 1e-04
Identities = 12/102 (11%), Positives = 28/102 (27%), Gaps = 4/102 (3%)
Query: 61 LQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIFKARCEKAGDYTKR 120
L K + VL + L ++KD ++ + + + +
Sbjct: 9 LTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHI 68
Query: 121 KHVF----RLYCTDGSEFLFLAPSETLMEDWVNKISFHAQLP 158
+F R D + ++ ++ W P
Sbjct: 69 FALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAGVYP 110
>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 36.0 bits (82), Expect = 8e-04
Identities = 13/109 (11%), Positives = 32/109 (29%), Gaps = 16/109 (14%)
Query: 52 QGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIFKARC 111
G L++ + R ++ + G + ++ ++ + S II +
Sbjct: 4 SGWLDKL-----SPQG--KRMFQKRWVKFDGLSISYYNNEKEM------YSKGIIPLSAI 50
Query: 112 EKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKISFHAQLPPS 160
+ T F+F E DW++ + +
Sbjct: 51 ST---VRVQGDNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQSL 96
>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1,
STAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 136
Score = 34.9 bits (79), Expect = 0.005
Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 12/105 (11%)
Query: 47 PPVEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIII 106
P+ +G L K ++ R ++ +T L G L F+ D+ + + I
Sbjct: 9 LPLYFEGFLLIK--------RSGYREYEHYWTELRGTTLFFYTDKKSIIYVD----KLDI 56
Query: 107 FKARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETLMEDWVNKI 151
C + T++ E + E+W I
Sbjct: 57 VDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFI 101
>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 33.9 bits (77), Expect = 0.008
Identities = 18/130 (13%), Positives = 40/130 (30%), Gaps = 17/130 (13%)
Query: 33 SFRKLQKLEQ----LDQLPPVEIQGVLERKHELQSGGKKAAVRSWKSLYTVLCGQLLCFF 88
+ +K+ ++++ + + + L G K + L L+
Sbjct: 1 AIKKMNEIQKNIDGWEGKDIGQCCNEFIMEGTLTRVGAK------HERHIFLFDGLMICC 54
Query: 89 KDQDDFVASKAATSPIIIFKARC-------EKAGDYTKRKHVFRLYCTDGSEFLFLAPSE 141
K A++ K + D + KH F + D + +F A S
Sbjct: 55 KSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSA 114
Query: 142 TLMEDWVNKI 151
+W+ +
Sbjct: 115 EEKNNWMAAL 124
>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor
9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 162
Score = 29.0 bits (64), Expect = 0.56
Identities = 11/88 (12%), Positives = 20/88 (22%), Gaps = 7/88 (7%)
Query: 72 SWKSLYTVLCGQLLCFFKDQDD------FVASKAATSPIIIFKARCEKAGDYTKRKHVFR 125
+ L + K + +I K+ F+
Sbjct: 42 RNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFK 101
Query: 126 LYCTDGSE-FLFLAPSETLMEDWVNKIS 152
L+ + E LF A W+
Sbjct: 102 LHNKETEEVHLFFAKKLEEKIRWLRAFR 129
>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 28.1 bits (62), Expect = 1.0
Identities = 18/129 (13%), Positives = 32/129 (24%), Gaps = 18/129 (13%)
Query: 32 QSFRKLQKLEQLDQLPPVEIQGVLERKHELQSGG--------KKAAVRSWKSLYTVLCGQ 83
SF + + ++ +E Q H+ K + +L
Sbjct: 13 NSFELDLQFSEDEKRLLLEKQAGGNPWHQFVENNLILKMGPVDKRKGLFARRRQLLLTEG 72
Query: 84 LLCFFKDQDDFVASKAATSPIIIFKARCEKAGDYTKRKHVFRLYCTDGSEFLFLAPSETL 143
++ D + V I + K V T + + PS
Sbjct: 73 PHLYYVDPVNKVLKGE-----IPWSQELRPEAKNFKTFFVHTPNRT----YYLMDPSGN- 122
Query: 144 MEDWVNKIS 152
W KI
Sbjct: 123 AHKWCRKIQ 131
>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange
factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId:
9606]}
Length = 140
Score = 25.8 bits (56), Expect = 5.8
Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 15/102 (14%)
Query: 66 KKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPII-----------IFKARCEKA 114
+ + L+ +L LL + QD+ + K + + + K
Sbjct: 33 WRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLI 92
Query: 115 GDYTKRKHVFRLYCTDGSE----FLFLAPSETLMEDWVNKIS 152
K F + CT + +A + + W+ +
Sbjct: 93 RSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLE 134
>d1eg3a1 a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 125
Score = 25.5 bits (56), Expect = 6.7
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 25 FTTRRRTQSFRKLQKLEQLDQLPPVEIQGVLE--RKHELQSGGK 66
F+ R R+LQK LD + + + +H L+ +
Sbjct: 19 FSAYRTAMKLRRLQKALCLDL---LSLSAACDALDQHNLKQNDQ 59
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 25.9 bits (56), Expect = 8.6
Identities = 9/71 (12%), Positives = 20/71 (28%)
Query: 57 RKHELQSGGKKAAVRSWKSLYTVLCGQLLCFFKDQDDFVASKAATSPIIIFKARCEKAGD 116
RK K + + L D + V + A + I ++
Sbjct: 135 RKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLL 194
Query: 117 YTKRKHVFRLY 127
+++ +L
Sbjct: 195 DLNPQNINKLL 205
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.129 0.381
Gapped
Lambda K H
0.267 0.0500 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,238,391
Number of extensions: 57639
Number of successful extensions: 117
Number of sequences better than 10.0: 1
Number of HSP's gapped: 106
Number of HSP's successfully gapped: 32
Length of query: 344
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 258
Effective length of database: 1,226,816
Effective search space: 316518528
Effective search space used: 316518528
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 53 (24.7 bits)