BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10627
(92 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P16086|SPTN1_RAT Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus
GN=Sptan1 PE=1 SV=2
Length = 2472
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 15 EIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHAHQ 67
EID R TF++ ++FG ++ SP + +L LD+ R L +W ++R LDH +
Sbjct: 1387 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDHCLE 1446
Query: 68 AQMFKEAADQAENWLVTKEA 87
Q+F +QAENW+ +EA
Sbjct: 1447 LQLFHRDCEQAENWMAAREA 1466
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
+ EID +++FKS E G + S +L+ L E R L WE +R + +
Sbjct: 407 KGEIDAHEDSFKSADESGQALLAAGHYASDEVREKLSILSEERAALLELWELRRQQYEQC 466
Query: 66 HQAQMFKEAADQAENWLVTKEA 87
Q+F +Q +NW+ +EA
Sbjct: 467 MDLQLFYRDTEQVDNWMSKQEA 488
>sp|P16546|SPTN1_MOUSE Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus GN=Sptan1
PE=1 SV=4
Length = 2472
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 15 EIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHAHQ 67
EID R TF++ ++FG ++ SP + +L LD+ R L +W ++R LDH +
Sbjct: 1387 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDHCLE 1446
Query: 68 AQMFKEAADQAENWLVTKEA 87
Q+F +QAENW+ +EA
Sbjct: 1447 LQLFHRDCEQAENWMAAREA 1466
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
+ EID +++FKS E G + S +L+ L E R L WE +R + +
Sbjct: 407 KGEIDAHEDSFKSADESGQALLAASHYASDEVREKLSILSEERTALLELWELRRQQYEQC 466
Query: 66 HQAQMFKEAADQAENWLVTKEA 87
Q+F +Q +NW+ +EA
Sbjct: 467 MDLQLFYRDTEQVDNWMSKQEA 488
>sp|P07751|SPTN1_CHICK Spectrin alpha chain, non-erythrocytic 1 OS=Gallus gallus GN=SPTAN1
PE=1 SV=3
Length = 2477
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 15 EIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHAHQ 67
EID R TF++ ++FG ++ SP + +L LD+ R L +W ++R LD +
Sbjct: 1387 EIDARAGTFQAFEQFGQQLLARGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDQCLE 1446
Query: 68 AQMFKEAADQAENWLVTKEA 87
Q+F +QAENW+ +EA
Sbjct: 1447 LQLFHRDCEQAENWMAAREA 1466
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
+ EID +++F+S E G + S + +LT L + R L WE +R + +
Sbjct: 407 KGEIDAHEDSFRSADESGQALLAAGHYASDEVKEKLTILSDERSALLELWELRRQQYEQC 466
Query: 66 HQAQMFKEAADQAENWLVTKEA 87
Q+F +Q +NW+ +EA
Sbjct: 467 MDLQLFYRDTEQVDNWMSKQEA 488
>sp|Q13813|SPTN1_HUMAN Spectrin alpha chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTAN1
PE=1 SV=3
Length = 2472
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 15 EIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHAHQ 67
EID R TF++ ++FG ++ SP + +L LD+ R L +W ++R LD +
Sbjct: 1387 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLE 1446
Query: 68 AQMFKEAADQAENWLVTKEA 87
Q+F +QAENW+ +EA
Sbjct: 1447 LQLFHRDCEQAENWMAAREA 1466
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
+ EID +++FKS E G + S +LT L E R L WE +R + +
Sbjct: 407 KGEIDAHEDSFKSADESGQALLAAGHYASDEVREKLTVLSEERAALLELWELRRQQYEQC 466
Query: 66 HQAQMFKEAADQAENWLVTKEA 87
Q+F +Q +NW+ +EA
Sbjct: 467 MDLQLFYRDTEQVDNWMSKQEA 488
>sp|P02549|SPTA1_HUMAN Spectrin alpha chain, erythrocytic 1 OS=Homo sapiens GN=SPTA1 PE=1
SV=5
Length = 2419
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 14 AEIDGRQETFKSLKEF-------GLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAH 66
A+++ TF++L++F G SP E +L + R L +WE+++ LD
Sbjct: 1336 ADMEAEAPTFQALEDFSAELIDSGHHASPEIEKKLQAVKLERDDLEKAWEKRKKILDQCL 1395
Query: 67 QAQMFKEAADQAENWLVTKEAT 88
+ QMF+ DQ E+W+V +E +
Sbjct: 1396 ELQMFQGNCDQVESWMVARENS 1417
>sp|P08032|SPTA1_MOUSE Spectrin alpha chain, erythrocytic 1 OS=Mus musculus GN=Spta1 PE=2
SV=3
Length = 2415
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 22 TFKSLKEFGLKVSPP-----REPE--LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA 74
TF++L++FG ++ RE + L ++ R L SWE ++ LD + Q+F+
Sbjct: 1342 TFQALEDFGTELIDSGHRNRREIDNTLQNINSKRDNLEKSWENRKKMLDQCLELQLFRGK 1401
Query: 75 ADQAENWLVTKEAT 88
DQ E+W+V +E +
Sbjct: 1402 CDQVESWMVARENS 1415
>sp|P13395|SPTCA_DROME Spectrin alpha chain OS=Drosophila melanogaster GN=alpha-Spec PE=1
SV=2
Length = 2415
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 15 EIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHAHQ 67
EID R TF + ++FG ++ SP + ++ L + R L +W E+R +L+
Sbjct: 1335 EIDARAGTFGAFEQFGNELLQANHYASPEIKEKIEDLAKAREDLEKAWTERRLQLEQNLD 1394
Query: 68 AQMFKEAADQAENWLVTKEA 87
Q++ + AE+W+ +EA
Sbjct: 1395 LQLYMRDCELAESWMSAREA 1414
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
+ EID R+++FK E G K+ + + +L L+ + L S WE++R +
Sbjct: 410 KGEIDAREDSFKLTTESGQKLLEREHYAAAEIQEKLAALENDKSSLLSLWEDRRILYEQC 469
Query: 66 HQAQMFKEAADQAENWLVTKEA 87
Q+F +QA+ W+ +EA
Sbjct: 470 MDLQLFYRDTEQADTWMAKQEA 491
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 16 IDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWE-------EQRTRLDHAHQA 68
I+G ++ +L+ ++ +DE R+Q+ W E+R+RL
Sbjct: 1442 INGHEQKIAALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGDEQTL 1501
Query: 69 QMFKEAADQAENWLVTK 85
Q F AD+ ENW+ K
Sbjct: 1502 QQFSRDADEIENWIAEK 1518
>sp|Q9QWN8|SPTN2_RAT Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus
GN=Sptbn2 PE=1 SV=2
Length = 2388
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 13 QAEIDGRQETFKSLKE----FGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQA 68
Q EI G + LKE G + P EL +L E+ ++L+ E + RL+ A +A
Sbjct: 1534 QKEIQGHEPRIADLKERQRTLGTAAAGP---ELAELQEMWKRLSHELELRGKRLEEALRA 1590
Query: 69 QMFKEAADQAENWLVTKE 86
Q F A +AE W+ +E
Sbjct: 1591 QQFYRDAAEAEAWMGEQE 1608
>sp|Q01082|SPTB2_HUMAN Spectrin beta chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTBN1
PE=1 SV=2
Length = 2364
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
+AEID R ++F + E G + S + +L +L E R+++ WE++ L
Sbjct: 1957 KAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLI 2016
Query: 66 HQAQMFKEAADQAENWLVTKE 86
+ F A AE WL+ +E
Sbjct: 2017 LEVHQFSRDASVAEAWLLGQE 2037
>sp|P11277|SPTB1_HUMAN Spectrin beta chain, erythrocytic OS=Homo sapiens GN=SPTB PE=1 SV=5
Length = 2137
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 15 EIDGRQETFKSLKEFGLKVSPPR-EPE-------LTKLDELRRQLASSWEEQRTRLDHAH 66
EIDG Q++++ +KE G KV + +PE L LD L WE + L
Sbjct: 1109 EIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWNALGRMWESRSHTLAQCL 1168
Query: 67 QAQMFKEAADQAENWLVTKEAT 88
Q F++ A QAE L +E T
Sbjct: 1169 GFQEFQKDAKQAEAILSNQEYT 1190
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 13 QAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQR-------TRLDHA 65
Q EI G + + + G ++ E + L+E L SSW+ R RL A
Sbjct: 1524 QNEILGHTPRVEDVLQRGQQLVEAAEIDCQDLEERLGHLQSSWDRLREAAAGRLQRLRDA 1583
Query: 66 HQAQMFKEAADQAENWLVTKE 86
++AQ + AD+AE W+ +E
Sbjct: 1584 NEAQQYYLDADEAEAWIGEQE 1604
>sp|Q62261|SPTB2_MOUSE Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus GN=Sptbn1
PE=1 SV=2
Length = 2363
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
+AEID R ++F + E G + S + +L +L E R+++ WE++ L
Sbjct: 1957 KAEIDARNDSFTACIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLI 2016
Query: 66 HQAQMFKEAADQAENWLVTKE 86
+ F A AE WL+ +E
Sbjct: 2017 LEVHQFSRDASVAEAWLLGQE 2037
>sp|O15020|SPTN2_HUMAN Spectrin beta chain, non-erythrocytic 2 OS=Homo sapiens GN=SPTBN2
PE=1 SV=3
Length = 2390
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 13 QAEIDGRQETFKSLKE----FGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQA 68
Q EI G + L+E G + P EL +L E+ ++L E + RL+ A +A
Sbjct: 1534 QKEIQGHEPRIADLRERQRALGAAAAGP---ELAELQEMWKRLGHELELRGKRLEDALRA 1590
Query: 69 QMFKEAADQAENWLVTKE 86
Q F A +AE W+ +E
Sbjct: 1591 QQFYRDAAEAEAWMGEQE 1608
>sp|B2S0Q2|DNLJ_BORHD DNA ligase OS=Borrelia hermsii (strain DAH) GN=ligA PE=3 SV=1
Length = 669
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 5 VYSILFSSQAEIDGRQETFKSLKEFGLKVSP 35
VY IL+SS +++ + F LK+FG KV+P
Sbjct: 219 VYDILYSS-LKLNTSHDAFDKLKQFGFKVNP 248
>sp|B5RMA6|DNLJ_BORDL DNA ligase OS=Borrelia duttonii (strain Ly) GN=ligA PE=3 SV=1
Length = 669
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 5 VYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTK-LDELRRQLASSWEEQRTRLD 63
VY IL+SS E++ + F LK FG K++P + K L E EEQR R +
Sbjct: 219 VYDILYSS-LELNTNHDAFDKLKHFGFKLNPFCKFFCGKNLGENIINYVKEIEEQRERFE 277
Query: 64 H 64
+
Sbjct: 278 Y 278
>sp|Q1LUA6|TRIO_DANRE Triple functional domain protein OS=Danio rerio GN=trio PE=3 SV=1
Length = 3028
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 41 LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLV 83
L KL R+ L SW ++ +LD Q ++F++ A++ +W++
Sbjct: 266 LEKLHSTRQNLHQSWHIRKLQLDQCFQLRLFEQDAEKMFDWIM 308
>sp|O66682|LY41_AQUAE Uncharacterized AIPM/Hcit synthase family transferase aq_356
OS=Aquifex aeolicus (strain VF5) GN=aq_356 PE=3 SV=1
Length = 528
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 12 SQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQL 51
+ +++ GR LKEFG+++ P+ PEL KL + ++L
Sbjct: 330 TVSDLAGRSNLVHKLKEFGIEID-PKSPELKKLIDKIKEL 368
>sp|Q00963|SPTCB_DROME Spectrin beta chain OS=Drosophila melanogaster GN=beta-Spec PE=1 SV=2
Length = 2291
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 11 SSQAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLD 63
S +AEID R++ F + G ++ S + L L R L WEE+ L
Sbjct: 1956 SLKAEIDTREDNFGACISLGKELLTRNHYASADIKDRLMTLSNSRNALLRRWEERWENLQ 2015
Query: 64 HAHQAQMFKEAADQAENWLVTKE 86
+ F A AE WL+ +E
Sbjct: 2016 LILEVYQFARDAAVAEAWLIAQE 2038
>sp|A2CG49|KALRN_MOUSE Kalirin OS=Mus musculus GN=Kalrn PE=1 SV=1
Length = 2964
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 41 LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWL 82
L KL R+ L W ++ +LD Q ++F++ A++ +W+
Sbjct: 267 LDKLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWI 308
>sp|O60229|KALRN_HUMAN Kalirin OS=Homo sapiens GN=KALRN PE=1 SV=2
Length = 2985
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 41 LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWL 82
L KL R+ L W ++ +LD Q ++F++ A++ +W+
Sbjct: 285 LDKLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWI 326
>sp|P97924|KALRN_RAT Kalirin OS=Rattus norvegicus GN=Kalrn PE=1 SV=3
Length = 2959
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 41 LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWL 82
L KL R+ L W ++ +LD Q ++F++ A++ +W+
Sbjct: 267 LDKLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWI 308
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,117,709
Number of Sequences: 539616
Number of extensions: 1013364
Number of successful extensions: 3372
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3211
Number of HSP's gapped (non-prelim): 158
length of query: 92
length of database: 191,569,459
effective HSP length: 62
effective length of query: 30
effective length of database: 158,113,267
effective search space: 4743398010
effective search space used: 4743398010
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)