Query psy10627
Match_columns 92
No_of_seqs 103 out of 417
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 23:21:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10627.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10627hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lbx_B Beta-I spectrin, spectr 99.8 1.2E-20 4E-25 125.8 9.2 90 2-91 39-135 (185)
2 3fb2_A Spectrin alpha chain, b 99.8 3.5E-19 1.2E-23 120.7 11.2 90 2-91 48-144 (218)
3 1s35_A Beta-I spectrin, spectr 99.8 8E-19 2.7E-23 118.0 11.2 90 2-91 35-132 (214)
4 1cun_A Protein (alpha spectrin 99.7 2.9E-16 1E-20 105.0 10.8 90 2-91 35-131 (213)
5 3r6n_A Desmoplakin; spectrin r 99.7 2.7E-16 9.1E-21 117.7 9.1 90 2-91 128-224 (450)
6 1u5p_A Spectrin alpha chain, b 99.6 2.6E-15 8.8E-20 100.9 11.2 90 2-91 38-134 (216)
7 3pe0_A Plectin; cytoskeleton, 99.6 4.5E-15 1.6E-19 105.2 9.8 88 2-89 43-140 (283)
8 1u4q_A Spectrin alpha chain, b 99.6 1.3E-14 4.6E-19 102.0 10.6 90 2-91 144-240 (322)
9 1quu_A Human skeletal muscle a 99.6 2.4E-14 8.2E-19 98.7 11.4 90 2-91 50-154 (250)
10 3edu_A Beta-I spectrin, spectr 99.6 6.1E-14 2.1E-18 94.8 11.1 89 2-90 36-132 (218)
11 3kbt_A Beta-I spectrin, spectr 99.5 5.7E-14 2E-18 99.0 10.5 90 2-91 39-135 (326)
12 1u4q_A Spectrin alpha chain, b 99.5 1.1E-12 3.9E-17 92.1 11.7 90 2-91 38-134 (322)
13 3edv_A Spectrin beta chain, br 99.4 1.2E-12 4.3E-17 92.2 11.3 89 2-90 41-137 (323)
14 3pdy_A Plectin; cytoskeleton, 99.3 5.6E-12 1.9E-16 85.3 8.0 86 2-90 40-129 (210)
15 3kbt_A Beta-I spectrin, spectr 99.3 1.5E-11 5.1E-16 86.6 10.2 89 2-90 145-241 (326)
16 1hci_A Alpha-actinin 2; triple 99.3 6.1E-11 2.1E-15 87.3 11.1 90 2-91 167-271 (476)
17 1sjj_A Actinin; 3-helix bundle 99.2 2.9E-11 1E-15 94.8 8.3 90 2-91 406-510 (863)
18 2iak_A Bullous pemphigoid anti 99.2 8.8E-11 3E-15 79.8 9.0 87 2-91 55-145 (224)
19 3edv_A Spectrin beta chain, br 99.2 1E-10 3.5E-15 82.3 9.5 89 2-90 147-243 (323)
20 1hci_A Alpha-actinin 2; triple 99.1 2.9E-10 1E-14 83.7 10.2 90 2-91 281-392 (476)
21 3uun_A Dystrophin; triple heli 99.0 8.7E-10 3E-14 67.4 7.6 69 2-70 38-116 (119)
22 3uul_A Utrophin; spectrin repe 99.0 2.1E-09 7E-14 65.8 8.5 67 2-68 38-114 (118)
23 3lbx_A Spectrin alpha chain, e 99.0 2.8E-09 9.7E-14 69.6 7.8 65 2-66 90-161 (161)
24 2spc_A Spectrin; cytoskeleton; 98.9 2.5E-09 8.4E-14 65.0 5.4 62 2-63 38-106 (107)
25 1sjj_A Actinin; 3-helix bundle 98.9 8.6E-09 2.9E-13 80.9 8.5 90 2-91 520-631 (863)
26 3lbx_A Spectrin alpha chain, e 98.8 6.8E-09 2.3E-13 67.7 6.1 72 20-91 7-81 (161)
27 3f31_A Spectrin alpha chain, b 98.8 1.1E-08 3.8E-13 65.8 6.4 62 2-63 80-148 (149)
28 1u5p_A Spectrin alpha chain, b 98.8 1.1E-08 3.8E-13 68.3 6.2 66 2-67 144-216 (216)
29 3r6n_A Desmoplakin; spectrin r 98.8 4.6E-08 1.6E-12 73.2 9.8 82 2-91 37-118 (450)
30 1s35_A Beta-I spectrin, spectr 98.7 2.1E-08 7.2E-13 66.8 6.5 65 2-66 142-213 (214)
31 2iak_A Bullous pemphigoid anti 98.6 1.8E-08 6.3E-13 68.3 3.3 62 2-63 155-223 (224)
32 1cun_A Protein (alpha spectrin 98.6 1.4E-07 4.8E-12 62.5 7.5 65 2-66 141-212 (213)
33 3f31_A Spectrin alpha chain, b 98.6 5.9E-08 2E-12 62.4 4.6 63 29-91 6-71 (149)
34 3pdy_A Plectin; cytoskeleton, 98.3 1.9E-06 6.4E-11 58.0 6.2 55 2-56 140-194 (210)
35 3edu_A Beta-I spectrin, spectr 98.0 3.9E-06 1.3E-10 56.2 3.2 68 2-69 142-217 (218)
36 3fb2_A Spectrin alpha chain, b 98.0 5.6E-06 1.9E-10 55.4 3.5 56 2-57 154-209 (218)
37 1g8x_A Myosin II heavy chain f 97.8 1.2E-06 4.1E-11 70.9 -2.8 74 2-75 921-1003(1010)
38 1quu_A Human skeletal muscle a 97.6 0.00035 1.2E-08 47.5 7.8 69 2-70 164-246 (250)
39 2ycu_A Non muscle myosin 2C, a 97.4 4.4E-05 1.5E-09 61.8 2.1 71 2-72 913-992 (995)
40 1g8x_A Myosin II heavy chain f 97.4 0.0024 8.2E-08 51.9 11.2 51 41-91 853-911 (1010)
41 2ycu_A Non muscle myosin 2C, a 96.5 0.00016 5.4E-09 58.6 -2.3 51 41-91 845-903 (995)
42 1wlx_A Alpha-actinin 4; three- 95.8 0.068 2.3E-06 33.7 7.6 64 2-65 47-124 (129)
43 2odv_A Plectin 1, HD1; plakin 95.4 0.17 5.6E-06 34.7 9.0 49 41-89 95-151 (235)
44 2odv_A Plectin 1, HD1; plakin 94.9 0.041 1.4E-06 37.8 4.8 57 6-62 164-220 (235)
45 3pe0_A Plectin; cytoskeleton, 92.7 0.057 1.9E-06 37.8 2.2 36 2-37 152-187 (283)
46 3lbx_B Beta-I spectrin, spectr 88.2 0.33 1.1E-05 31.2 2.7 29 2-30 145-173 (185)
47 3mxz_A Tubulin-specific chaper 27.3 78 0.0027 19.1 3.6 29 2-30 17-45 (116)
48 1h7c_A Tubulin-specific chaper 26.9 99 0.0034 18.3 3.9 30 2-31 16-45 (108)
49 3m48_A General control protein 25.7 62 0.0021 15.3 2.4 17 2-18 9-25 (33)
50 3ra3_B P2F; coiled coil domain 24.0 59 0.002 14.4 2.7 24 2-25 2-25 (28)
51 2oxj_A Hybrid alpha/beta pepti 22.7 75 0.0025 15.1 2.4 17 2-18 10-26 (34)
No 1
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.84 E-value=1.2e-20 Score=125.76 Aligned_cols=90 Identities=22% Similarity=0.368 Sum_probs=86.1
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA 74 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd 74 (92)
|+.+|++|++++.||++|.++|..+...|+.|+..+||. +..|...|..|...|..|+..|.+|++++.|.+|
T Consensus 39 ~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~w~~r~~~L~~~l~l~~F~~d 118 (185)
T 3lbx_B 39 VELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRD 118 (185)
T ss_dssp SCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999999973 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhcccC
Q psy10627 75 ADQAENWLVTKEATEYR 91 (92)
Q Consensus 75 a~q~e~Wl~~qE~~L~~ 91 (92)
|+++++||.++|++|++
T Consensus 119 ~~~~~~Wl~~~e~~L~~ 135 (185)
T 3lbx_B 119 ASVAEAWLIAQEPYLAS 135 (185)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhHhhhcc
Confidence 99999999999998864
No 2
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.81 E-value=3.5e-19 Score=120.73 Aligned_cols=90 Identities=29% Similarity=0.499 Sum_probs=85.3
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA 74 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd 74 (92)
|+.+|++|++++.||+++.+.|+.+...|+.|+..+||. +..|...|..|...|..|+..|.+|++++.|.+|
T Consensus 48 ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~l~~F~~d 127 (218)
T 3fb2_A 48 AEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLFHRD 127 (218)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999873 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhcccC
Q psy10627 75 ADQAENWLVTKEATEYR 91 (92)
Q Consensus 75 a~q~e~Wl~~qE~~L~~ 91 (92)
++++++||..+|.+|++
T Consensus 128 ~~~~~~WL~~~e~~L~~ 144 (218)
T 3fb2_A 128 CEQAENWMAAREAFLNT 144 (218)
T ss_dssp HHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 99999999999999865
No 3
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.79 E-value=8e-19 Score=117.96 Aligned_cols=90 Identities=31% Similarity=0.395 Sum_probs=84.9
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCC-hH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPRE-PE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKE 73 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h-~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~r 73 (92)
|+.+|++|+.++.||+++++.|..+...|+.|+..++ |+ +..|...|..|...|..|+..|.+|++++.|.+
T Consensus 35 v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l~l~~F~~ 114 (214)
T 1s35_A 35 AEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQK 114 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999864 32 999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhchhcccC
Q psy10627 74 AADQAENWLVTKEATEYR 91 (92)
Q Consensus 74 da~q~e~Wl~~qE~~L~~ 91 (92)
||+++++||..+|++|++
T Consensus 115 ~~~~~~~Wl~~~E~~l~~ 132 (214)
T 1s35_A 115 DAKQAEAILSNQEYTLAH 132 (214)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999998864
No 4
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.69 E-value=2.9e-16 Score=105.05 Aligned_cols=90 Identities=17% Similarity=0.237 Sum_probs=85.9
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA 74 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd 74 (92)
|+.++++|+.+..||.++.+.++.+...|+.|+..+||+ +..|...|..|...|..|+..|.+++.++.|.+|
T Consensus 35 v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~~~~f~~~ 114 (213)
T 1cun_A 35 VQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVAN 114 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999983 8889999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhcccC
Q psy10627 75 ADQAENWLVTKEATEYR 91 (92)
Q Consensus 75 a~q~e~Wl~~qE~~L~~ 91 (92)
|+.+++||..++.++.+
T Consensus 115 ~~e~~~Wl~~~e~~l~~ 131 (213)
T 1cun_A 115 VEEEEAWINEKMTLVAS 131 (213)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999988765
No 5
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.66 E-value=2.7e-16 Score=117.69 Aligned_cols=90 Identities=12% Similarity=0.122 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA 74 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd 74 (92)
|..++++|+.+++||++|++.|+.+...|+.|+..+||. +..|...|+.|.+.+..|+..|..+.++|+|++|
T Consensus 128 v~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~~Hpas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF~~D 207 (450)
T 3r6n_A 128 IAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEE 207 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 457899999999999999999999999999999999982 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhcccC
Q psy10627 75 ADQAENWLVTKEATEYR 91 (92)
Q Consensus 75 a~q~e~Wl~~qE~~L~~ 91 (92)
|+.+++||..++++|.+
T Consensus 208 a~EaesWL~eke~~l~s 224 (450)
T 3r6n_A 208 AQSTEAYLKGLQDSIRK 224 (450)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999988753
No 6
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.64 E-value=2.6e-15 Score=100.88 Aligned_cols=90 Identities=16% Similarity=0.257 Sum_probs=85.3
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA 74 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd 74 (92)
|+.+|++|+.+..+|.++.+.+..+...|..|+..+|++ +..|..+|..|...|..|+..|.+++.++.|.+|
T Consensus 38 v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l~qf~~~ 117 (216)
T 1u5p_A 38 VNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRD 117 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999998873 8889999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhcccC
Q psy10627 75 ADQAENWLVTKEATEYR 91 (92)
Q Consensus 75 a~q~e~Wl~~qE~~L~~ 91 (92)
++.+++||..+++.+++
T Consensus 118 ~~~~~~Wl~e~e~~~~~ 134 (216)
T 1u5p_A 118 MDDEESWIKEKKLLVSS 134 (216)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHhHHHHHHHHhcC
Confidence 99999999999987754
No 7
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.60 E-value=4.5e-15 Score=105.18 Aligned_cols=88 Identities=13% Similarity=0.070 Sum_probs=80.9
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA 74 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd 74 (92)
+..++++|+.+.+||.+|++.++.+...|+.|+..+||. +..|...|+.|.+.+..|+..|..+.++|+|++|
T Consensus 43 l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~hp~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~qF~~d 122 (283)
T 3pe0_A 43 MTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSD 122 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778899999999999999999999999999999983 8889999999999999999999999999999999
Q ss_pred HHHHHHHHH---hchhcc
Q psy10627 75 ADQAENWLV---TKEATE 89 (92)
Q Consensus 75 a~q~e~Wl~---~qE~~L 89 (92)
|+.+++||. .++..+
T Consensus 123 a~e~e~Wl~~~~e~~~~~ 140 (283)
T 3pe0_A 123 VREAEGQLQKLQEALRRK 140 (283)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999987 665544
No 8
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.58 E-value=1.3e-14 Score=101.99 Aligned_cols=90 Identities=16% Similarity=0.230 Sum_probs=85.6
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA 74 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd 74 (92)
|+.++++|+.++.||.++.+.+..+...|+.|+..+||+ +..|...|..|...|..|+..|.+++.++.|..|
T Consensus 144 v~~ll~~h~~l~~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~~~qf~~~ 223 (322)
T 1u4q_A 144 VQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVAN 223 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999873 8889999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhcccC
Q psy10627 75 ADQAENWLVTKEATEYR 91 (92)
Q Consensus 75 a~q~e~Wl~~qE~~L~~ 91 (92)
++.+++||..++.+|.+
T Consensus 224 ~~~~~~Wl~~~e~~l~~ 240 (322)
T 1u4q_A 224 VEEEEAWINEKMTLVAS 240 (322)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999988764
No 9
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.58 E-value=2.4e-14 Score=98.66 Aligned_cols=90 Identities=10% Similarity=0.171 Sum_probs=85.7
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQ----- 69 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq----- 69 (92)
|+.++++|+.+..+|.++.+.++.+...|+.|+..+||+ +..|...|..|...+..|+..|..++.++
T Consensus 50 v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~ 129 (250)
T 1quu_A 50 VRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQ 129 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999983 88899999999999999999999999999
Q ss_pred ---hhHHhHHHHHHHHHhchhcccC
Q psy10627 70 ---MFKEAADQAENWLVTKEATEYR 91 (92)
Q Consensus 70 ---~F~rda~q~e~Wl~~qE~~L~~ 91 (92)
.|.++|+.+++||..+++.|.+
T Consensus 130 l~~qF~~~a~~~~~Wl~~~e~~l~~ 154 (250)
T 1quu_A 130 LHLEFAKRAAPFNNWMEGAMEDLQD 154 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 9999999999999999988865
No 10
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.55 E-value=6.1e-14 Score=94.82 Aligned_cols=89 Identities=11% Similarity=0.065 Sum_probs=84.3
Q ss_pred HHHHHHHHHhhHHHHhh-chHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy10627 2 INKVYSILFSSQAEIDG-RQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKE 73 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~-r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~r 73 (92)
|+.++++|..+..|+.+ +.+++..+...|..|+..+||+ +..|..+|..|......|+..|..+++++.|.+
T Consensus 36 v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~F~~ 115 (218)
T 3edu_A 36 VTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFY 115 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999 8999999999999999999984 888999999999999999999999999999999
Q ss_pred hHHHHHHHHHhchhccc
Q psy10627 74 AADQAENWLVTKEATEY 90 (92)
Q Consensus 74 da~q~e~Wl~~qE~~L~ 90 (92)
||+.+.+||..++..|+
T Consensus 116 ~~~e~~~Wl~ek~~~l~ 132 (218)
T 3edu_A 116 TGAEILGLIDEKHRELP 132 (218)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhhCC
Confidence 99999999999998874
No 11
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.54 E-value=5.7e-14 Score=99.04 Aligned_cols=90 Identities=18% Similarity=0.240 Sum_probs=85.1
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA 74 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd 74 (92)
|+.++++|+.++.||+++.+.++.+...|+.|+..+||+ +..|...|..|...|..|+..|.+++.++.|.++
T Consensus 39 ~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~l~~~w~~L~~~~~~R~~~Le~~l~l~~f~~~ 118 (326)
T 3kbt_A 39 AIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRE 118 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999998873 8899999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhcccC
Q psy10627 75 ADQAENWLVTKEATEYR 91 (92)
Q Consensus 75 a~q~e~Wl~~qE~~L~~ 91 (92)
++.+..||..++.++.+
T Consensus 119 ~~~l~~Wl~~~e~~l~~ 135 (326)
T 3kbt_A 119 TDDLEQWISEKELVASS 135 (326)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcc
Confidence 99999999999887643
No 12
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.45 E-value=1.1e-12 Score=92.10 Aligned_cols=90 Identities=16% Similarity=0.257 Sum_probs=84.6
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA 74 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd 74 (92)
|+.++++|+.+..+|.++.+.+..+...|..|+..+|++ +..|..+|..|...+..|+..|..++.++.|.+|
T Consensus 38 v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l~~f~~~ 117 (322)
T 1u4q_A 38 VNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRD 117 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999988763 7889999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhcccC
Q psy10627 75 ADQAENWLVTKEATEYR 91 (92)
Q Consensus 75 a~q~e~Wl~~qE~~L~~ 91 (92)
++.+.+||..++..+.+
T Consensus 118 ~~~~~~Wl~e~e~~~~~ 134 (322)
T 1u4q_A 118 MDDEESWIKEKKLLVSS 134 (322)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhccC
Confidence 99999999999887754
No 13
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.44 E-value=1.2e-12 Score=92.17 Aligned_cols=89 Identities=10% Similarity=0.074 Sum_probs=84.0
Q ss_pred HHHHHHHHHhhHHHHhh-chHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy10627 2 INKVYSILFSSQAEIDG-RQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKE 73 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~-r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~r 73 (92)
|+.++++|..+..||.+ +.+++..+...|..|+..+||+ +..|..+|..|...+..|+..|..++.++.|.+
T Consensus 41 v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~ 120 (323)
T 3edv_A 41 VTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYH 120 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999998 7999999999999999999984 788999999999999999999999999999999
Q ss_pred hHHHHHHHHHhchhccc
Q psy10627 74 AADQAENWLVTKEATEY 90 (92)
Q Consensus 74 da~q~e~Wl~~qE~~L~ 90 (92)
||+.+.+||..++..|.
T Consensus 121 ~~~e~~~Wl~~k~~~l~ 137 (323)
T 3edv_A 121 DAKEIFGRIQDKHKKLP 137 (323)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 99999999999988774
No 14
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.32 E-value=5.6e-12 Score=85.31 Aligned_cols=86 Identities=20% Similarity=0.212 Sum_probs=78.2
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE----LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQ 77 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e----l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q 77 (92)
|+.++++|+.+..||.++.+.++.+...|..+...+++. +..|...|..|......|+..|. .++.|.++|..
T Consensus 40 ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~i~~rl~~l~~~~~~L~~~a~~R~~~L~---~L~~f~~~~~~ 116 (210)
T 3pdy_A 40 VEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLE---SLHSFVAAATK 116 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 789999999999999999999999999999887554432 88999999999999999999999 78999999999
Q ss_pred HHHHHHhchhccc
Q psy10627 78 AENWLVTKEATEY 90 (92)
Q Consensus 78 ~e~Wl~~qE~~L~ 90 (92)
+++||+.+|..+.
T Consensus 117 ~~~Wl~eke~~~~ 129 (210)
T 3pdy_A 117 ELMWLNEKEEEEV 129 (210)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 15
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.31 E-value=1.5e-11 Score=86.59 Aligned_cols=89 Identities=11% Similarity=0.065 Sum_probs=82.2
Q ss_pred HHHHHHHHHhhHHHHhh-chHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy10627 2 INKVYSILFSSQAEIDG-RQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKE 73 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~-r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~r 73 (92)
|+.++++|..+..+|.+ +.+.+..+...|..|+..+||+ +..|..+|..|......|+..|..++.++.|.+
T Consensus 145 v~~l~~~~~~f~~el~~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~~~~f~~ 224 (326)
T 3kbt_A 145 VTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFY 224 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999998 8999999999999999999983 888999999999999999999999999999999
Q ss_pred hHHHHHHHHHhchhccc
Q psy10627 74 AADQAENWLVTKEATEY 90 (92)
Q Consensus 74 da~q~e~Wl~~qE~~L~ 90 (92)
|++.+.+||..++..|.
T Consensus 225 ~~~e~~~Wl~ek~~~L~ 241 (326)
T 3kbt_A 225 TGAEILGLIDEKHRELP 241 (326)
T ss_dssp HHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhhCc
Confidence 99999999999987764
No 16
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.26 E-value=6.1e-11 Score=87.32 Aligned_cols=90 Identities=10% Similarity=0.171 Sum_probs=83.6
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQ----- 69 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq----- 69 (92)
|+.++++|+.+..+|.++.+.+..+...|+.|+..+||+ +..|..+|..|......|+..|..++.++
T Consensus 167 v~~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~~e~ 246 (476)
T 1hci_A 167 VRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQ 246 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999874 88899999999999999999999999988
Q ss_pred ---hhHHhHHHHHHHHHhchhcccC
Q psy10627 70 ---MFKEAADQAENWLVTKEATEYR 91 (92)
Q Consensus 70 ---~F~rda~q~e~Wl~~qE~~L~~ 91 (92)
.|.++|..+.+||...+..|.+
T Consensus 247 l~~~f~~~a~~~~~Wl~~~~~~l~~ 271 (476)
T 1hci_A 247 LHLEFAKRAAPFNNWMEGAMEDLQD 271 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999988877654
No 17
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.22 E-value=2.9e-11 Score=94.82 Aligned_cols=90 Identities=10% Similarity=0.163 Sum_probs=85.0
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQ----- 69 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq----- 69 (92)
|+.++++|+.+..+|.++++.++.+...|+.|+..+|++ +..|..+|..|...+..|+..|..++.++
T Consensus 406 v~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~ 485 (863)
T 1sjj_A 406 IKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQ 485 (863)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999873 88899999999999999999999999999
Q ss_pred ---hhHHhHHHHHHHHHhchhcccC
Q psy10627 70 ---MFKEAADQAENWLVTKEATEYR 91 (92)
Q Consensus 70 ---~F~rda~q~e~Wl~~qE~~L~~ 91 (92)
.|.++|+.+.+||...+..|.+
T Consensus 486 l~~~f~~~a~~~~~Wl~~~e~~l~~ 510 (863)
T 1sjj_A 486 LYLEYAKRAAPFNNWMEGAMEDLQD 510 (863)
T ss_dssp HHHHHHHHTTTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999887764
No 18
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.20 E-value=8.8e-11 Score=79.84 Aligned_cols=87 Identities=20% Similarity=0.256 Sum_probs=76.3
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE----LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQ 77 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e----l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q 77 (92)
|+.+|++|+.+..+|.++.+.+..+...+..+.....+. +..|..+|..|...+..|+..|. .++.|.+||+.
T Consensus 55 v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~L~~~~~~R~~~Le---~l~~F~~~~~~ 131 (224)
T 2iak_A 55 VESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLD---TLHNFVTRATN 131 (224)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 789999999999999999999999987777765411111 88899999999999999999999 99999999999
Q ss_pred HHHHHHhchhcccC
Q psy10627 78 AENWLVTKEATEYR 91 (92)
Q Consensus 78 ~e~Wl~~qE~~L~~ 91 (92)
.++||..+++.+.+
T Consensus 132 ~~~Wi~eke~~~~s 145 (224)
T 2iak_A 132 ELIWLNEKEESEVA 145 (224)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988764
No 19
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.20 E-value=1e-10 Score=82.34 Aligned_cols=89 Identities=12% Similarity=0.137 Sum_probs=81.8
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE--------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKE 73 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e--------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~r 73 (92)
|+.++.+|..+..+|.++.+.++.+...|..|+...+++ +..|..+|..|......|+..|..++.++.|..
T Consensus 147 v~~l~~~h~~~~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~~~~F~~ 226 (323)
T 3edv_A 147 VETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFS 226 (323)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999876541 888999999999999999999999999999999
Q ss_pred hHHHHHHHHHhchhccc
Q psy10627 74 AADQAENWLVTKEATEY 90 (92)
Q Consensus 74 da~q~e~Wl~~qE~~L~ 90 (92)
+++.+.+||...+..+.
T Consensus 227 ~~~~l~~Wl~~~~~~l~ 243 (323)
T 3edv_A 227 MVRDLMLWMEDVIRQIE 243 (323)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999998877654
No 20
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.15 E-value=2.9e-10 Score=83.68 Aligned_cols=90 Identities=13% Similarity=0.107 Sum_probs=80.8
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHH---HHHhhhhcCCCCh----H-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSL---KEFGLKVSPPREP----E-------LTKLDELRRQLASSWEEQRTRLDHAHQ 67 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l---~~~G~~L~~~~h~----e-------l~~L~~~~~~l~~~We~R~~~L~q~~~ 67 (92)
|+.++++|..++.+|++....+..+ ...|..|+..+|+ + +..|..+|..|...+..|+..|..++.
T Consensus 281 v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~ 360 (476)
T 1hci_A 281 IQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA 360 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCSCCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999888877 6788888887664 1 999999999999999999999999998
Q ss_pred H--------HhhHHhHHHHHHHHHhchhcccC
Q psy10627 68 A--------QMFKEAADQAENWLVTKEATEYR 91 (92)
Q Consensus 68 l--------q~F~rda~q~e~Wl~~qE~~L~~ 91 (92)
. +.|.++|+.+.+||..++..|.+
T Consensus 361 ~~~~~~~L~~~F~~~a~~~~~Wl~e~e~~l~~ 392 (476)
T 1hci_A 361 RQHANERLRRQFAAQANAIGPWIQNKMEEIAR 392 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5 59999999999999999887753
No 21
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.05 E-value=8.7e-10 Score=67.37 Aligned_cols=69 Identities=10% Similarity=0.124 Sum_probs=62.6
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCCh--H--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREP--E--------LTKLDELRRQLASSWEEQRTRLDHAHQAQM 70 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~--e--------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~ 70 (92)
|+.++++|+.+..||.++.+.++.+...|..|+..+|+ + +..|..+|..|...+..|+..|..++...+
T Consensus 38 v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~Q 116 (119)
T 3uun_A 38 VKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQ 116 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999988764 1 888999999999999999999999985543
No 22
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.02 E-value=2.1e-09 Score=65.76 Aligned_cols=67 Identities=18% Similarity=0.195 Sum_probs=61.4
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCCh---H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREP---E-------LTKLDELRRQLASSWEEQRTRLDHAHQA 68 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~---e-------l~~L~~~~~~l~~~We~R~~~L~q~~~l 68 (92)
|+.++++|+.+..||.++.+.++.+...|..|+..+|+ + +..|..+|..|...+..|+..|..++..
T Consensus 38 v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~ 114 (118)
T 3uul_A 38 VKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALME 114 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999998875 1 8889999999999999999999999743
No 23
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=98.96 E-value=2.8e-09 Score=69.57 Aligned_cols=65 Identities=18% Similarity=0.115 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAH 66 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~ 66 (92)
|+.++++|+.+.+||.++.+.++.+...|+.|+..+||. +..|...|+.|......|+..|.+++
T Consensus 90 v~~ll~kH~afe~El~a~~~~~~~l~~~g~~Li~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eAl 161 (161)
T 3lbx_A 90 IQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL 161 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 678999999999999999999999999999999999973 88999999999999999999998753
No 24
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=98.90 E-value=2.5e-09 Score=64.98 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=55.1
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLD 63 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~ 63 (92)
|+.|+++|+.+..+|.++.+++..+...|+.|+..|||+ ...|..+|..|....+.|+..|.
T Consensus 38 v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~~~~~I~~r~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 38 VEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999999999999985 66777778888888778887763
No 25
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.85 E-value=8.6e-09 Score=80.88 Aligned_cols=90 Identities=14% Similarity=0.130 Sum_probs=79.1
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCC-------CC---hH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPP-------RE---PE----LTKLDELRRQLASSWEEQRTRLDHAHQ 67 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~-------~h---~e----l~~L~~~~~~l~~~We~R~~~L~q~~~ 67 (92)
|+.++++|+.++.+|.++.+.+..+...|+.+..- ++ +. +..|..+|..|...+..|+..|.+++.
T Consensus 520 ve~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~ 599 (863)
T 1sjj_A 520 IQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHA 599 (863)
T ss_dssp GHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999988888876551 22 21 999999999999999999999999996
Q ss_pred --------HHhhHHhHHHHHHHHHhchhcccC
Q psy10627 68 --------AQMFKEAADQAENWLVTKEATEYR 91 (92)
Q Consensus 68 --------lq~F~rda~q~e~Wl~~qE~~L~~ 91 (92)
.+.|.++|+.+.+||..++..|.+
T Consensus 600 ~~~~~~~l~~~F~~~a~~~~~Wi~e~e~~l~~ 631 (863)
T 1sjj_A 600 RQQQNERLRKQFGAQANVIGPWIQTKMEEIGR 631 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999987754
No 26
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=98.83 E-value=6.8e-09 Score=67.75 Aligned_cols=72 Identities=19% Similarity=0.227 Sum_probs=51.3
Q ss_pred hHhHHHHHHHhhhhcCCCCh--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHhchhcccC
Q psy10627 20 QETFKSLKEFGLKVSPPREP--E-LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEATEYR 91 (92)
Q Consensus 20 ~~~~~~l~~~G~~L~~~~h~--e-l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q~e~Wl~~qE~~L~~ 91 (92)
.|+-+.+...|.+++..... + +..|..+|..|...+..|+..|.+++.++.|.+||+.++.||..++.++.+
T Consensus 7 ~~~~~~~~~~~~k~~e~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~~lq~F~~d~~el~~Wi~ek~~~a~~ 81 (161)
T 3lbx_A 7 FPKETVVESSGPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTD 81 (161)
T ss_dssp ---------------CCSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCchhccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence 34444556778888776542 2 999999999999999999999999999999999999999999999887653
No 27
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=98.81 E-value=1.1e-08 Score=65.79 Aligned_cols=62 Identities=16% Similarity=0.115 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLD 63 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~ 63 (92)
|+.++++|+.+.+||.++.+.++.+...|+.|+..+||. +..|...|+.|....+.|...|.
T Consensus 80 v~~~l~kH~afe~El~a~~~~l~~v~~~g~~Li~~~~~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 80 LQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 678999999999999999999999999999999999973 88899999999999999998886
No 28
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=98.79 E-value=1.1e-08 Score=68.28 Aligned_cols=66 Identities=14% Similarity=0.196 Sum_probs=58.8
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQ 67 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~ 67 (92)
|+.++++|+.+..||.++.+.+..+...|+.|+..+||+ +..|...|..|......|+..|..+++
T Consensus 144 v~~ll~kh~~~~~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al~ 216 (216)
T 1u5p_A 144 VQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE 216 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 688999999999999999999999999999999999973 888999999999999999999987763
No 29
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=98.78 E-value=4.6e-08 Score=73.23 Aligned_cols=82 Identities=16% Similarity=0.120 Sum_probs=72.0
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENW 81 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~el~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q~e~W 81 (92)
|+.|+++|+.+.++|.++.+.++.+...+. ..+.+..|...+..|......|+..|. .++.|++||+..++|
T Consensus 37 Ve~LLqKH~~lE~eI~a~~~~v~~l~~~a~-----~~~~~~~L~~~y~~L~~~a~~Rr~~Le---~L~qFl~d~~ee~~W 108 (450)
T 3r6n_A 37 VEQHINSHRGIHNSIGDYRWQLDKIKADLR-----EKSAIYQLEEEYENLLKASFERMDHLR---QLQNIIQATSREIMW 108 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CcHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 789999999999999999999999876632 123488999999999999999999998 689999999999999
Q ss_pred HHhchhcccC
Q psy10627 82 LVTKEATEYR 91 (92)
Q Consensus 82 l~~qE~~L~~ 91 (92)
|..++..+.+
T Consensus 109 i~EKe~~~~s 118 (450)
T 3r6n_A 109 INDCEEEELL 118 (450)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhc
Confidence 9999887643
No 30
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=98.75 E-value=2.1e-08 Score=66.80 Aligned_cols=65 Identities=9% Similarity=0.040 Sum_probs=59.9
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAH 66 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~ 66 (92)
|+.++++|+.+..+|.++.+.+..+...|+.|+..+||+ +..|..+|..|.....+|+..|..++
T Consensus 142 v~~llkkh~~f~~~l~~~~~~i~~l~~~a~~L~~~~h~~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 142 AEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 689999999999999999999999999999999999984 78899999999999999999998654
No 31
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=98.62 E-value=1.8e-08 Score=68.29 Aligned_cols=62 Identities=10% Similarity=0.146 Sum_probs=44.4
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLD 63 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~ 63 (92)
|+.|+++|+.+.+||+++++.|+.|...|+.|+..+||+ +..|...|+.|.+....|+..|.
T Consensus 155 v~~L~~kh~~l~~el~~~~~~v~~v~~~g~~L~~~~h~~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~ 223 (224)
T 2iak_A 155 VARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQ 223 (224)
T ss_dssp -------CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 678999999999999999999999999999999999984 77788888888888888887775
No 32
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=98.62 E-value=1.4e-07 Score=62.52 Aligned_cols=65 Identities=9% Similarity=0.133 Sum_probs=60.6
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAH 66 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~ 66 (92)
|+.++++|+.+..+|.++.+.+..+...|+.|+..+||+ +..|..+|..|......|+..|..++
T Consensus 141 v~~ll~~h~~~~~el~~~~~~i~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~ 212 (213)
T 1cun_A 141 IQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 678999999999999999999999999999999999984 88899999999999999999998765
No 33
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=98.58 E-value=5.9e-08 Score=62.36 Aligned_cols=63 Identities=21% Similarity=0.302 Sum_probs=50.1
Q ss_pred HhhhhcCCCCh--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHhchhcccC
Q psy10627 29 FGLKVSPPREP--E-LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEATEYR 91 (92)
Q Consensus 29 ~G~~L~~~~h~--e-l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q~e~Wl~~qE~~L~~ 91 (92)
.|.++...... + +..|..+|..|...+..|+..|.+++.++.|.+||+.+++||..++.++.+
T Consensus 6 ~~~~~~~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~l~~F~~d~~el~~Wi~ek~~~~~~ 71 (149)
T 3f31_A 6 SGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASD 71 (149)
T ss_dssp -------CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44555554432 2 888999999999999999999999999999999999999999999988754
No 34
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=98.27 E-value=1.9e-06 Score=57.95 Aligned_cols=55 Identities=13% Similarity=0.288 Sum_probs=46.4
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWE 56 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~el~~L~~~~~~l~~~We 56 (92)
|+.++.+|+.+++||.++++.+..+...|+.|+..+||.-..|....+.|...|.
T Consensus 140 v~~l~~k~~~f~~el~~~~~~v~~l~~~~~~Ll~~~h~~~~~I~~~~~~l~~~W~ 194 (210)
T 3pdy_A 140 MTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWS 194 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999865555555555555555
No 35
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=97.98 E-value=3.9e-06 Score=56.18 Aligned_cols=68 Identities=7% Similarity=0.076 Sum_probs=44.6
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCCh-H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREP-E-------LTKLDELRRQLASSWEEQRTRLDHAHQAQ 69 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~-e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq 69 (92)
|+.++.+|..+..+|.++++.+..+...|..|+..+++ + +..|...|..|...-+.|+..|..++++.
T Consensus 142 v~~l~~~h~~~e~dL~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~ 217 (218)
T 3edu_A 142 AESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKF 217 (218)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 67889999999999999999999999999999998754 2 66777777777777778999999887753
No 36
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=97.95 E-value=5.6e-06 Score=55.43 Aligned_cols=56 Identities=11% Similarity=0.211 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEE 57 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~el~~L~~~~~~l~~~We~ 57 (92)
|+.++++|..+..+|.++.+.+..+...|..|+..+||+.+.+......|...|..
T Consensus 154 ve~ll~~h~~f~~~l~~~~~~v~~l~~~~~~L~~~~h~~~~~I~~~~~~l~~rW~~ 209 (218)
T 3fb2_A 154 VEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRR 209 (218)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999998655566666666666654
No 37
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=97.76 E-value=1.2e-06 Score=70.94 Aligned_cols=74 Identities=11% Similarity=-0.054 Sum_probs=66.6
Q ss_pred HHHHHHHHHhhHHHHhhchHhHH-HHHHHhhhhcCCCChH-------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFK-SLKEFGLKVSPPREPE-------LTKLD-ELRRQLASSWEEQRTRLDHAHQAQMFK 72 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~-~l~~~G~~L~~~~h~e-------l~~L~-~~~~~l~~~We~R~~~L~q~~~lq~F~ 72 (92)
|++++++|+.+.++|.++++++. .+...|+.|++.+|++ ...|. +.|+.|.+....|+..|++++++|++.
T Consensus 921 Vqal~KKhea~e~dl~a~e~ri~~~l~~~a~eL~~~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq~~~~~ 1000 (1010)
T 1g8x_A 921 VQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKI 1000 (1010)
T ss_dssp TGGGTTSHHHHTTTTTHHHHTHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTSTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999 8999999999999874 66674 789999999999999999999999988
Q ss_pred HhH
Q psy10627 73 EAA 75 (92)
Q Consensus 73 rda 75 (92)
.|.
T Consensus 1001 ~~~ 1003 (1010)
T 1g8x_A 1001 EDL 1003 (1010)
T ss_dssp TST
T ss_pred HHh
Confidence 764
No 38
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=97.58 E-value=0.00035 Score=47.54 Aligned_cols=69 Identities=12% Similarity=0.077 Sum_probs=54.3
Q ss_pred HHHHHHHHHhhHHHHhhch---HhHHHHHHHhhhhcCCCC-------hH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQ---ETFKSLKEFGLKVSPPRE-------PE----LTKLDELRRQLASSWEEQRTRLDHAHQ 67 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~---~~~~~l~~~G~~L~~~~h-------~e----l~~L~~~~~~l~~~We~R~~~L~q~~~ 67 (92)
|+.|+++|..++.+|.+.+ ..+..+...++.|+...| |+ +..|..+|..|...-..|+..|..++.
T Consensus 164 v~~ll~~h~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~ 243 (250)
T 1quu_A 164 IQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA 243 (250)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6889999999995555555 555555666677765543 32 999999999999999999999999988
Q ss_pred HHh
Q psy10627 68 AQM 70 (92)
Q Consensus 68 lq~ 70 (92)
.|.
T Consensus 244 ~q~ 246 (250)
T 1quu_A 244 RQH 246 (250)
T ss_dssp HHS
T ss_pred HHh
Confidence 764
No 39
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=97.44 E-value=4.4e-05 Score=61.78 Aligned_cols=71 Identities=13% Similarity=0.019 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhHHHHhhchHhHH-HHHHHhhhhcCCCChHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhhH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFK-SLKEFGLKVSPPREPELTKLDELRRQ--------LASSWEEQRTRLDHAHQAQMFK 72 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~-~l~~~G~~L~~~~h~el~~L~~~~~~--------l~~~We~R~~~L~q~~~lq~F~ 72 (92)
|++++++|+.+.++|.++++++. .+...|+.|+..+|++-+.+..+... |.+.-.+|+..|+.++++|+-.
T Consensus 913 vqallkKhea~e~dl~a~e~ri~~~l~~~a~~L~~~~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~~~q~~ 992 (995)
T 2ycu_A 913 VQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKI 992 (995)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCSCSSHHHHHHHHTTTHHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999997 89999999999999864444444444 4444456999999999988754
No 40
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=97.36 E-value=0.0024 Score=51.91 Aligned_cols=51 Identities=20% Similarity=0.222 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHhhHHhHHHHHHHHHhchhcccC
Q psy10627 41 LTKLDELRRQLASSWEEQRTRLDHAHQ--------AQMFKEAADQAENWLVTKEATEYR 91 (92)
Q Consensus 41 l~~L~~~~~~l~~~We~R~~~L~q~~~--------lq~F~rda~q~e~Wl~~qE~~L~~ 91 (92)
+..|...|..|..+..+|...|...+. .+.|.++|+..++|+..++.+|++
T Consensus 853 ~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s 911 (1010)
T 1g8x_A 853 PNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGS 911 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 899999999999999999999998644 599999999999999999988865
No 41
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=96.53 E-value=0.00016 Score=58.58 Aligned_cols=51 Identities=20% Similarity=0.202 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHhhHHhHHHHHHHHHhchhcccC
Q psy10627 41 LTKLDELRRQLASSWEEQRTRLDHAH--------QAQMFKEAADQAENWLVTKEATEYR 91 (92)
Q Consensus 41 l~~L~~~~~~l~~~We~R~~~L~q~~--------~lq~F~rda~q~e~Wl~~qE~~L~~ 91 (92)
+..|...|..|..+..+|...|...+ .+++|.++|+.+|+||..+|..|.+
T Consensus 845 ~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s 903 (995)
T 2ycu_A 845 PNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGS 903 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 78899999999999999998887544 2489999999999999999988753
No 42
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=95.79 E-value=0.068 Score=33.70 Aligned_cols=64 Identities=6% Similarity=0.023 Sum_probs=49.9
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcC---C-------CChH----HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSP---P-------REPE----LTKLDELRRQLASSWEEQRTRLDHA 65 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~---~-------~h~e----l~~L~~~~~~l~~~We~R~~~L~q~ 65 (92)
|+.|+..|..+++.+...+..|+.+....+.|-. + .+|. ...|...|+.|...=.+|...|+.-
T Consensus 47 I~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~~~~~~~~~~~~~npYT~it~~~l~~~W~~l~~li~~Rd~~Lq~E 124 (129)
T 1wlx_A 47 IEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEE 124 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6889999999999999988888888444333321 1 1131 8999999999999999999998753
No 43
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=95.39 E-value=0.17 Score=34.72 Aligned_cols=49 Identities=16% Similarity=0.100 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHhhHHhHHHHHHHHHhchhcc
Q psy10627 41 LTKLDELRRQLASSWEEQRTRLDHA--------HQAQMFKEAADQAENWLVTKEATE 89 (92)
Q Consensus 41 l~~L~~~~~~l~~~We~R~~~L~q~--------~~lq~F~rda~q~e~Wl~~qE~~L 89 (92)
+..|...|..|..+=.+|...|... .-.+.|.++|+..++|++..+..|
T Consensus 95 ~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L 151 (235)
T 2odv_A 95 PLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALL 151 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999998887 567899999999999999887766
No 44
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=94.90 E-value=0.041 Score=37.76 Aligned_cols=57 Identities=12% Similarity=0.029 Sum_probs=47.6
Q ss_pred HHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627 6 YSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRL 62 (92)
Q Consensus 6 l~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~el~~L~~~~~~l~~~We~R~~~L 62 (92)
+++|..+..+|.++++.+..+...++.|....|++...+..+...|.+.|..=+..+
T Consensus 164 ~k~~e~ie~dL~~~e~~i~~l~~~a~~L~~~~y~~a~~i~~r~~~l~~~w~~L~~~~ 220 (235)
T 2odv_A 164 PQRAGEVERDLDKADSMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEY 220 (235)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999998877777777777777777644433
No 45
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=92.70 E-value=0.057 Score=37.77 Aligned_cols=36 Identities=6% Similarity=0.095 Sum_probs=33.4
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCC
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPR 37 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~ 37 (92)
++.||++|+.++.+|.++...+..+...++.|+..+
T Consensus 152 ~~~LLkkh~~le~~l~~~~~~i~~L~~~a~~l~~l~ 187 (283)
T 3pe0_A 152 LEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLK 187 (283)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 678999999999999999999999999999998754
No 46
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=88.25 E-value=0.33 Score=31.23 Aligned_cols=29 Identities=14% Similarity=0.121 Sum_probs=26.1
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFG 30 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G 30 (92)
|+.||++|..+..+|.++++.|..+...+
T Consensus 145 ve~LlkkH~~fe~~l~~~~e~i~~L~~~t 173 (185)
T 3lbx_B 145 VEKLIKRHEAFEKSTASWAERFAALEKPT 173 (185)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhhH
Confidence 68999999999999999999999986543
No 47
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=27.34 E-value=78 Score=19.10 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=26.0
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFG 30 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G 30 (92)
+.+|++....+..|+......++.+...|
T Consensus 17 vkRL~KE~~~Y~kE~~~q~~kiekmk~e~ 45 (116)
T 3mxz_A 17 CKRIVKELHSYEKEVEREAAKTADMKDKG 45 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 67899999999999999999999988754
No 48
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=26.87 E-value=99 Score=18.28 Aligned_cols=30 Identities=7% Similarity=0.101 Sum_probs=27.0
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHHHHHHhh
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKSLKEFGL 31 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~ 31 (92)
+.+|++....+..|+......++.+...|.
T Consensus 16 vkRL~KE~~~Y~kE~~~q~~riek~k~e~~ 45 (108)
T 1h7c_A 16 VRRLVKERVMYEKEAKQQEEKIEKMRAEDG 45 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 678999999999999999999999987655
No 49
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=25.71 E-value=62 Score=15.29 Aligned_cols=17 Identities=12% Similarity=0.262 Sum_probs=12.6
Q ss_pred HHHHHHHHHhhHHHHhh
Q psy10627 2 INKVYSILFSSQAEIDG 18 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~ 18 (92)
|+.|+.+..++..|+..
T Consensus 9 VEeLl~~n~~Le~EV~R 25 (33)
T 3m48_A 9 VEELLSKNWNLENEVAR 25 (33)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHH
Confidence 56778888888877754
No 50
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=24.01 E-value=59 Score=14.40 Aligned_cols=24 Identities=13% Similarity=0.068 Sum_probs=16.3
Q ss_pred HHHHHHHHHhhHHHHhhchHhHHH
Q psy10627 2 INKVYSILFSSQAEIDGRQETFKS 25 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~r~~~~~~ 25 (92)
|.+|-.+...++.||.+-+-.+..
T Consensus 2 irrlkqknarlkqeiaaleyeiaa 25 (28)
T 3ra3_B 2 IRRLKQKNARLKQEIAALEYEIAA 25 (28)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHH
Confidence 456677778888888886655543
No 51
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=22.65 E-value=75 Score=15.10 Aligned_cols=17 Identities=6% Similarity=0.131 Sum_probs=12.0
Q ss_pred HHHHHHHHHhhHHHHhh
Q psy10627 2 INKVYSILFSSQAEIDG 18 (92)
Q Consensus 2 ~e~ll~~Hq~~~~EI~~ 18 (92)
|+.||.+..++..|+..
T Consensus 10 VEeLl~~n~~Le~eV~r 26 (34)
T 2oxj_A 10 VXELLXKNXHLEXEVXR 26 (34)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHHHHHHH
Confidence 56777777777777654
Done!