Query psy10628
Match_columns 238
No_of_seqs 115 out of 1166
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 23:22:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10628.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10628hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u5p_A Spectrin alpha chain, b 100.0 3.8E-37 1.3E-41 247.0 29.5 209 25-233 7-216 (216)
2 1cun_A Protein (alpha spectrin 100.0 3.1E-36 1.1E-40 241.0 30.8 208 25-232 4-212 (213)
3 1s35_A Beta-I spectrin, spectr 100.0 2.4E-35 8.1E-40 236.2 27.4 206 27-232 6-213 (214)
4 3edu_A Beta-I spectrin, spectr 100.0 4.4E-36 1.5E-40 241.4 22.3 212 25-236 5-218 (218)
5 1u4q_A Spectrin alpha chain, b 100.0 8.9E-34 3E-38 240.2 30.9 212 26-237 8-220 (322)
6 1u4q_A Spectrin alpha chain, b 100.0 1.5E-33 5.2E-38 238.7 32.2 227 6-232 90-321 (322)
7 3edv_A Spectrin beta chain, br 100.0 2.9E-33 9.8E-38 237.3 28.7 215 20-237 8-224 (323)
8 3kbt_A Beta-I spectrin, spectr 100.0 7.2E-33 2.5E-37 235.0 30.5 215 20-237 6-222 (326)
9 3fb2_A Spectrin alpha chain, b 100.0 1.6E-33 5.5E-38 226.4 24.0 206 17-225 12-218 (218)
10 3kbt_A Beta-I spectrin, spectr 100.0 6.1E-33 2.1E-37 235.5 24.6 232 4-235 89-326 (326)
11 3edv_A Spectrin beta chain, br 100.0 5.9E-31 2E-35 223.0 31.5 224 5-229 93-322 (323)
12 1quu_A Human skeletal muscle a 100.0 8.3E-32 2.8E-36 220.7 24.9 217 20-236 12-246 (250)
13 3pdy_A Plectin; cytoskeleton, 100.0 6E-32 2E-36 216.0 23.0 198 24-230 11-209 (210)
14 2iak_A Bullous pemphigoid anti 100.0 1.4E-32 4.9E-37 221.7 17.2 195 30-230 29-224 (224)
15 3r6n_A Desmoplakin; spectrin r 100.0 1.9E-28 6.6E-33 214.3 25.4 196 24-237 8-204 (450)
16 1hci_A Alpha-actinin 2; triple 100.0 3.9E-28 1.3E-32 215.9 27.2 211 24-234 134-361 (476)
17 3lbx_A Spectrin alpha chain, e 100.0 3.7E-27 1.3E-31 180.4 16.6 140 93-232 22-161 (161)
18 3lbx_B Beta-I spectrin, spectr 100.0 1.1E-26 3.6E-31 182.0 19.3 167 19-188 5-172 (185)
19 1sjj_A Actinin; 3-helix bundle 99.9 2.4E-26 8.2E-31 217.7 22.7 214 20-233 368-599 (863)
20 3f31_A Spectrin alpha chain, b 99.9 5.5E-26 1.9E-30 171.9 16.4 137 93-229 12-148 (149)
21 3r6n_A Desmoplakin; spectrin r 99.9 6.1E-24 2.1E-28 185.9 26.8 228 9-237 80-376 (450)
22 1hci_A Alpha-actinin 2; triple 99.9 6.2E-24 2.1E-28 188.8 25.9 205 25-232 250-472 (476)
23 3pe0_A Plectin; cytoskeleton, 99.9 3.1E-24 1E-28 178.1 18.0 175 20-197 10-188 (283)
24 1sjj_A Actinin; 3-helix bundle 99.9 1.2E-20 4.1E-25 178.7 21.7 208 26-235 255-480 (863)
25 1g8x_A Myosin II heavy chain f 99.8 9.5E-19 3.2E-23 166.2 17.8 214 23-237 768-999 (1010)
26 3uul_A Utrophin; spectrin repe 99.8 4.8E-18 1.6E-22 122.9 15.1 110 128-237 3-117 (118)
27 3uun_A Dystrophin; triple heli 99.8 6.1E-18 2.1E-22 122.4 15.5 111 127-237 2-117 (119)
28 1s35_A Beta-I spectrin, spectr 99.8 2.1E-17 7.1E-22 131.7 15.9 125 3-127 85-213 (214)
29 3uul_A Utrophin; spectrin repe 99.8 6.1E-17 2.1E-21 117.0 15.9 104 25-128 6-113 (118)
30 1u5p_A Spectrin alpha chain, b 99.7 4.9E-17 1.7E-21 129.7 15.8 123 5-127 89-215 (216)
31 2spc_A Spectrin; cytoskeleton; 99.7 1.6E-18 5.4E-23 123.5 6.4 104 126-229 2-106 (107)
32 3pe0_A Plectin; cytoskeleton, 99.7 2.6E-17 8.8E-22 136.5 14.5 117 121-237 2-119 (283)
33 1quu_A Human skeletal muscle a 99.7 4.2E-17 1.4E-21 133.1 15.6 117 117-235 6-124 (250)
34 3uun_A Dystrophin; triple heli 99.7 6E-17 2.1E-21 117.1 14.2 107 20-129 4-114 (119)
35 3lbx_A Spectrin alpha chain, e 99.7 3.7E-17 1.3E-21 124.7 13.7 123 4-127 35-161 (161)
36 1cun_A Protein (alpha spectrin 99.7 6.1E-17 2.1E-21 128.8 15.2 109 129-237 2-111 (213)
37 2odv_A Plectin 1, HD1; plakin 99.7 3.6E-16 1.2E-20 125.6 17.8 198 26-226 16-225 (235)
38 3edu_A Beta-I spectrin, spectr 99.7 1.6E-16 5.5E-21 127.1 15.3 109 129-237 3-113 (218)
39 2spc_A Spectrin; cytoskeleton; 99.7 6E-18 2E-22 120.5 5.7 102 20-124 5-106 (107)
40 3lbx_B Beta-I spectrin, spectr 99.7 2E-16 7E-21 123.4 12.9 112 126-237 3-115 (185)
41 3f31_A Spectrin alpha chain, b 99.7 4.1E-16 1.4E-20 117.5 12.5 105 19-124 41-148 (149)
42 3fb2_A Spectrin alpha chain, b 99.7 1.4E-15 4.7E-20 121.6 16.1 114 124-237 10-124 (218)
43 2ycu_A Non muscle myosin 2C, a 99.7 1E-18 3.6E-23 166.0 -4.4 212 25-237 762-991 (995)
44 2iak_A Bullous pemphigoid anti 99.7 3.2E-16 1.1E-20 125.9 9.4 120 6-125 97-224 (224)
45 3pdy_A Plectin; cytoskeleton, 99.6 6E-15 2.1E-19 117.3 12.9 108 18-125 102-209 (210)
46 1g8x_A Myosin II heavy chain f 99.3 3.3E-13 1.1E-17 128.5 1.8 133 3-135 856-1002(1010)
47 1wlx_A Alpha-actinin 4; three- 99.2 1.4E-09 4.7E-14 78.2 15.4 102 130-235 15-128 (129)
48 2ycu_A Non muscle myosin 2C, a 99.1 3.2E-12 1.1E-16 121.7 -1.1 104 29-132 886-991 (995)
49 1wlx_A Alpha-actinin 4; three- 98.8 1.7E-07 5.9E-12 67.3 14.0 104 19-126 9-124 (129)
50 2odv_A Plectin 1, HD1; plakin 98.7 2.4E-08 8.1E-13 80.1 6.4 94 25-121 132-225 (235)
51 2p22_C Protein SRN2; endosome, 71.5 31 0.0011 26.1 10.7 30 158-187 157-186 (192)
52 2lw1_A ABC transporter ATP-bin 71.3 18 0.00063 23.5 9.1 52 30-81 31-83 (89)
53 3fx7_A Putative uncharacterize 61.5 16 0.00054 24.3 4.7 24 129-152 61-84 (94)
54 3lay_A Zinc resistance-associa 48.4 81 0.0028 23.4 11.6 53 62-114 79-131 (175)
55 2lw1_A ABC transporter ATP-bin 40.4 72 0.0025 20.6 9.0 52 131-182 26-79 (89)
56 3swy_A Cyclic nucleotide-gated 32.1 41 0.0014 19.1 2.7 27 203-229 17-43 (46)
57 1ez3_A Syntaxin-1A; three heli 30.9 1.2E+02 0.0043 20.5 10.6 70 160-230 6-75 (127)
58 1ybk_A Tetrabrachion; right ha 29.2 76 0.0026 17.4 3.5 23 209-231 18-40 (52)
59 1zw0_A Type III secretion prot 27.3 1.1E+02 0.0037 18.7 6.3 24 48-71 33-56 (66)
60 1s94_A S-syntaxin; three helix 25.5 2E+02 0.0067 21.0 9.1 26 163-188 40-65 (180)
61 2ke4_A CDC42-interacting prote 24.7 1.6E+02 0.0053 19.5 9.5 59 55-113 16-75 (98)
62 3lay_A Zinc resistance-associa 22.3 2.4E+02 0.0082 20.8 10.8 61 168-228 80-140 (175)
63 1oeg_A Apolipoprotein E; siali 21.2 48 0.0016 16.3 1.4 17 207-223 3-19 (26)
64 1rq0_A RF-1, peptide chain rel 20.2 3.7E+02 0.013 22.2 8.9 47 39-89 7-53 (342)
No 1
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=100.00 E-value=3.8e-37 Score=247.05 Aligned_cols=209 Identities=29% Similarity=0.505 Sum_probs=196.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHHHHHHH
Q psy10628 25 SGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQQRLQA 104 (238)
Q Consensus 25 ~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~ 104 (238)
.|...+.++.+||.+++..|.+.++|.|+..|+.++++|+.|+.+|.++.++|..|+..|..|+..++++++.|..++..
T Consensus 7 ~F~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~ 86 (216)
T 1u5p_A 7 NFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRET 86 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 34445559999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHhhhhhHH
Q psy10628 105 VIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAANKSRVG 183 (238)
Q Consensus 105 L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~~~~~v~ 183 (238)
|+.+|+.|+..+..|+.+|+.++.+++|..+++++..||.+++..++++++ +|+..|+.++++|++|+.+|.++.+.|.
T Consensus 87 l~~~w~~L~~~~~~R~~~Le~~~~l~qf~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~kh~~~~~el~~~~~~i~ 166 (216)
T 1u5p_A 87 INGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQ 166 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999999999999999999999998877665 7899999999999999999999999999
Q ss_pred hHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 184 AVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAYQ 233 (238)
Q Consensus 184 ~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~ 233 (238)
.|...|+.|+..+|++++.|+.+++.|+.+|..|+..+..|+..|+++++
T Consensus 167 ~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al~ 216 (216)
T 1u5p_A 167 GVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE 216 (216)
T ss_dssp HHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999998863
No 2
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=100.00 E-value=3.1e-36 Score=241.04 Aligned_cols=208 Identities=29% Similarity=0.449 Sum_probs=198.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHHHHHHH
Q psy10628 25 SGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQQRLQA 104 (238)
Q Consensus 25 ~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~ 104 (238)
+|..++.++..||.+++..+.++++|.|+..|+.++++|+.|+.+|.++.+.|+.|...|+.|+..++++++.|..++..
T Consensus 4 qf~~~~~~~~~Wl~e~e~~l~~~~~g~dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~i~~~~~~ 83 (213)
T 1cun_A 4 QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRLAQ 83 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 34444559999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHhhhhhHH
Q psy10628 105 VIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAANKSRVG 183 (238)
Q Consensus 105 L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~~~~~v~ 183 (238)
|+.+|+.|+..+..|+.+|+.++.+++|+.+++++..||.+++..+.++++ .|+..++.++++|++|+.++..+.+.|.
T Consensus 84 l~~~w~~L~~~~~~R~~~Le~~~~~~~f~~~~~e~~~Wl~~~e~~l~~~~~g~~~~~v~~ll~~h~~~~~el~~~~~~i~ 163 (213)
T 1cun_A 84 FVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVN 163 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998877665 6899999999999999999999999999
Q ss_pred hHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 184 AVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAY 232 (238)
Q Consensus 184 ~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~ 232 (238)
.|...|+.|+..+|++++.|+.+++.|..+|..|+..+..|+..|++++
T Consensus 164 ~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~ 212 (213)
T 1cun_A 164 DVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212 (213)
T ss_dssp HHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999985
No 3
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=100.00 E-value=2.4e-35 Score=236.25 Aligned_cols=206 Identities=17% Similarity=0.233 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCC-CchHHHHHHHHH
Q psy10628 27 VEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHY-DSSGIQQRLQAV 105 (238)
Q Consensus 27 ~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~-~~~~i~~~l~~L 105 (238)
..++.++..||.+++..+.+.++|+|+..|+.++++|..|+.+|.++.+.|..|...|..|+..+++ +++.|+.++..|
T Consensus 6 ~~~~~~l~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~l~~L 85 (214)
T 1s35_A 6 LQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGL 85 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 3344499999999999999999999999999999999999999999999999999999999997643 678999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHhhhhhHHh
Q psy10628 106 IARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAANKSRVGA 184 (238)
Q Consensus 106 ~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~~~~~v~~ 184 (238)
+.+|..|...+..|+.+|+++++++.|..+++++..||.+++..+++.++ +|++.|+.++++|+.|+.++.++.+.|..
T Consensus 86 ~~~w~~L~~~~~~r~~~L~~~l~l~~F~~~~~~~~~Wl~~~E~~l~~~~~g~~~~~v~~llkkh~~f~~~l~~~~~~i~~ 165 (214)
T 1s35_A 86 DTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLS 165 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999998876654 68999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 185 VTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAY 232 (238)
Q Consensus 185 l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~ 232 (238)
|...|+.|+..+||+++.|..+++.|..+|..|...+.+|...|++++
T Consensus 166 l~~~a~~L~~~~h~~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 166 PVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp HHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999875
No 4
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=100.00 E-value=4.4e-36 Score=241.40 Aligned_cols=212 Identities=20% Similarity=0.245 Sum_probs=176.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-hHhhHHHHHHHHHhhHhcCCCCchHHHHHHH
Q psy10628 25 SGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEA-QLSRIDDLEKFAKDLLAEHHYDSSGIQQRLQ 103 (238)
Q Consensus 25 ~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~-~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~ 103 (238)
.|...+.++..||.+++..+.+.++|.|++.|+.++++|+.|+.++.+ +.++|..|+..|..|+..+|++++.|+.+++
T Consensus 5 ~f~~~~~~l~~Wl~~ke~~l~~~~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~~ 84 (218)
T 3edu_A 5 QLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKD 84 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 344444499999999999999999999999999999999999999998 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHHHHHhhhhhHH
Q psy10628 104 AVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESYRDPTNLQSKIQKHAAFESELAANKSRVG 183 (238)
Q Consensus 104 ~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~~d~~~i~~~l~kh~~~~~ei~~~~~~v~ 183 (238)
.|+.+|..|...+..|+..|+.++.++.|+.+++++..||.+++..++.+.++|+..|+.++++|+.|+.+|.++.+.|.
T Consensus 85 ~l~~~W~~L~~~~~~R~~~L~~a~~~~~F~~~~~e~~~Wl~ek~~~l~~~~g~dl~~v~~l~~~h~~~e~dL~~~~~~v~ 164 (218)
T 3edu_A 85 GLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQ 164 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------CCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988655557999999999999999999999999999
Q ss_pred hHHHHHHHhhcCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy10628 184 AVTAEGESLISGGHF-AAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQR 236 (238)
Q Consensus 184 ~l~~~g~~L~~~~~~-~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q 236 (238)
.|...|..|+..+|+ .++.|..+++.|..+|..|...+..|+..|++|+.+|.
T Consensus 165 ~l~~~a~~L~~~~~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~ 218 (218)
T 3edu_A 165 QFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218 (218)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--------------
T ss_pred HHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999998874 57899999999999999999999999999999998873
No 5
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=100.00 E-value=8.9e-34 Score=240.17 Aligned_cols=212 Identities=29% Similarity=0.500 Sum_probs=202.5
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHHHHHHHH
Q psy10628 26 GVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQQRLQAV 105 (238)
Q Consensus 26 ~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~L 105 (238)
|.+.+.++..||.+++..+.+.++|.|+..|+.++++|+.|+.+|.++...|+.++..|..|+..++++++.|..++..|
T Consensus 8 F~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l 87 (322)
T 1u4q_A 8 FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETI 87 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCSSCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHH
Confidence 44445599999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHhhhhhHHh
Q psy10628 106 IARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAANKSRVGA 184 (238)
Q Consensus 106 ~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~~~~~v~~ 184 (238)
+.+|..|+..+..|+.+|+.++.+++|..+++++..||.+++..+.++++ +|+..|+.++++|+.|+.+|.++.+.|..
T Consensus 88 ~~~w~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~~h~~l~~el~~~~~~i~~ 167 (322)
T 1u4q_A 88 NGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQG 167 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998877655 68999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 185 VTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 185 l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
|...|+.|+..+|++++.|+.+++.|+.+|..|...+..|+..|++++.++||
T Consensus 168 l~~~g~~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~~~qf 220 (322)
T 1u4q_A 168 VLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQF 220 (322)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988776
No 6
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=100.00 E-value=1.5e-33 Score=238.75 Aligned_cols=227 Identities=27% Similarity=0.420 Sum_probs=206.9
Q ss_pred hHHHHHHHHHchH-HHHh---HhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHH
Q psy10628 6 GLSSLKEAFLNND-DIGE---SLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLE 81 (238)
Q Consensus 6 ~~~~l~~~w~~r~-~l~~---~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~ 81 (238)
.|..|...+..|. .|+. +..|..++.++.+||.+++..+.+.++|.|+..|+.++++|+.|+.+|.++.+.|..|.
T Consensus 90 ~w~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~~h~~l~~el~~~~~~i~~l~ 169 (322)
T 1u4q_A 90 RFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVL 169 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444 3654 34566678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhh
Q psy10628 82 KFAKDLLAEHHYDSSGIQQRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTN 160 (238)
Q Consensus 82 ~~~~~L~~~~~~~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~ 160 (238)
..|+.|+..++++++.|+.++..|+.+|+.|+..+..|+.+|+.++.+++|..+++++..||.+++..+.+.++ .|++.
T Consensus 170 ~~g~~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~~~qf~~~~~~~~~Wl~~~e~~l~~~~~g~~~~~ 249 (322)
T 1u4q_A 170 DTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAA 249 (322)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCTTSHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998876655 68999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 161 LQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAY 232 (238)
Q Consensus 161 i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~ 232 (238)
++.++++|+.|+.+|..+.+.|..|...|+.|+..++|+++.|..++..|+.+|..|...+.+|+.+|++|+
T Consensus 250 ~~~ll~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~R~~~L~~a~ 321 (322)
T 1u4q_A 250 IQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 321 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999875
No 7
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.9e-33 Score=237.29 Aligned_cols=215 Identities=20% Similarity=0.303 Sum_probs=201.2
Q ss_pred HHhHhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-hHhhHHHHHHHHHhhHhcCCCCchHH
Q psy10628 20 IGESLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEA-QLSRIDDLEKFAKDLLAEHHYDSSGI 98 (238)
Q Consensus 20 l~~~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~-~~~~v~~l~~~~~~L~~~~~~~~~~i 98 (238)
|..|....+ .+..||.+++..+.+.++|.|++.|+.++++|+.|+.++.+ +.++|+.|+..|+.|+..+|++++.|
T Consensus 8 l~~f~~~~~---~l~~Wl~~~e~~l~~~~~g~dl~~v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i 84 (323)
T 3edv_A 8 LFQLNREVD---DLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATI 84 (323)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCChHHH
Confidence 444555555 99999999999999999999999999999999999999998 78999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHHHHHhh
Q psy10628 99 QQRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESYRDPTNLQSKIQKHAAFESELAAN 178 (238)
Q Consensus 99 ~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~~d~~~i~~~l~kh~~~~~ei~~~ 178 (238)
+.+++.|+.+|..|+..+..|+..|+.++.++.|..+++++..||.+++..++.+.++|+..|+.++++|+.|+.+|.++
T Consensus 85 ~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~~~~e~~~Wl~~k~~~l~~~~~~d~~~v~~l~~~h~~~~~~l~~~ 164 (323)
T 3edv_A 85 AEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQAL 164 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSSHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998886555589999999999999999999999
Q ss_pred hhhHHhHHHHHHHhhcCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 179 KSRVGAVTAEGESLISGGHF-AAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 179 ~~~v~~l~~~g~~L~~~~~~-~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
.+.|..|...|..|+..+|+ .++.|+.++..|+.+|..|...+..|+..|++++.+++|
T Consensus 165 ~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~~~~F 224 (323)
T 3edv_A 165 GTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRF 224 (323)
T ss_dssp HHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998776 578899999999999999999999999999999987665
No 8
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=100.00 E-value=7.2e-33 Score=235.03 Aligned_cols=215 Identities=23% Similarity=0.308 Sum_probs=203.1
Q ss_pred HHhHhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHH
Q psy10628 20 IGESLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQ 99 (238)
Q Consensus 20 l~~~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~ 99 (238)
+++|+.... ++++||.+++..+.+.++|.|+..++.++++|+.|+.+|.++...|+.+...|+.|+..++++++.|.
T Consensus 6 ~qqf~~~~~---el~~Wl~e~~~~l~~~~~g~d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~ 82 (326)
T 3kbt_A 6 AQQYYLDAD---EAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEGEQII 82 (326)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHTTSCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHH
Confidence 455555555 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHh-
Q psy10628 100 QRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAA- 177 (238)
Q Consensus 100 ~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~- 177 (238)
.++..|+.+|+.|+..+..|+.+|+.++.++.|.++++++..||.+++..+.+.++ .|+..|..++++|+.|+.++.+
T Consensus 83 ~~l~~l~~~w~~L~~~~~~R~~~Le~~l~l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~d~~~v~~l~~~~~~f~~el~~~ 162 (326)
T 3kbt_A 83 RLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAI 162 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998876654 6899999999999999999998
Q ss_pred hhhhHHhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 178 NKSRVGAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 178 ~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
+.+.|..|+..|+.|+..+|++++.|+.+++.|+.+|..|...+..|...|..++.+++|
T Consensus 163 ~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~~~~f 222 (326)
T 3kbt_A 163 GQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRY 222 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999887765
No 9
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=226.41 Aligned_cols=206 Identities=24% Similarity=0.462 Sum_probs=177.2
Q ss_pred hHHHHhHhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCch
Q psy10628 17 NDDIGESLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSS 96 (238)
Q Consensus 17 r~~l~~~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~ 96 (238)
++.++.|+.... ++..||.+++..+++.++|.|+..++.++++|+.|+.+|.++.+.|..+...|+.|+..++++.+
T Consensus 12 ~~~~~~F~~~~~---~l~~Wl~~~~~~l~~~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~~~~ 88 (218)
T 3fb2_A 12 SHDLQRFLSDFR---DLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASP 88 (218)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCTTHH
T ss_pred hhHHHHHHHHHH---HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCchH
Confidence 445777777777 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHH
Q psy10628 97 GIQQRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESEL 175 (238)
Q Consensus 97 ~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei 175 (238)
.|+.++..|+.+|+.|+..+..|+.+|+.+++++.|.++++++..||.+++..+.+.++ ++++.|+.++++|+.|+.++
T Consensus 89 ~i~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~l~~F~~d~~~~~~WL~~~e~~L~~~~~g~s~~~ve~ll~~h~~f~~~l 168 (218)
T 3fb2_A 89 EIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAI 168 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------------------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988766554 68899999999999999999
Q ss_pred HhhhhhHHhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 176 AANKSRVGAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKR 225 (238)
Q Consensus 176 ~~~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~ 225 (238)
.++.+.|..|...|+.|+..+||+++.|..+++.|..+|..|...+.+|+
T Consensus 169 ~~~~~~v~~l~~~~~~L~~~~h~~~~~I~~~~~~l~~rW~~l~~~l~~rr 218 (218)
T 3fb2_A 169 NVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HhhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999998875
No 10
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=100.00 E-value=6.1e-33 Score=235.48 Aligned_cols=232 Identities=19% Similarity=0.233 Sum_probs=177.7
Q ss_pred hhhHHHHHHHHHchHH-HHh---HhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH-hHhhHH
Q psy10628 4 DDGLSSLKEAFLNNDD-IGE---SLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEA-QLSRID 78 (238)
Q Consensus 4 ~~~~~~l~~~w~~r~~-l~~---~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~-~~~~v~ 78 (238)
++.+..|...|..|.. |+. +..|...+.++..||.+++..+.+.++|.+++.|+.++++|+.|+.++.+ +..+|.
T Consensus 89 ~~~w~~L~~~~~~R~~~Le~~l~l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~d~~~v~~l~~~~~~f~~el~~~~~~~v~ 168 (326)
T 3kbt_A 89 DKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVD 168 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4556666666666654 665 34556677899999999999999988999999999999999999999998 789999
Q ss_pred HHHHHHHhhHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCCCCh
Q psy10628 79 DLEKFAKDLLAEHHYDSSGIQQRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESYRDP 158 (238)
Q Consensus 79 ~l~~~~~~L~~~~~~~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~~d~ 158 (238)
.|+..|..|+..+|++++.|+.+++.|+.+|..|+..+..|+..|..++.++.|..+++++..||.+++..++.+.+.|+
T Consensus 169 ~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~~~~f~~~~~e~~~Wl~ek~~~L~~~~~~d~ 248 (326)
T 3kbt_A 169 NVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPEDVGLDA 248 (326)
T ss_dssp HHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998864445799
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10628 159 TNLQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHF-AAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQ 235 (238)
Q Consensus 159 ~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~-~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~ 235 (238)
..++.++++|+.|+.+|.++++.|+.|...|+.|+..+|+ .+..|..++..|..+|..|...+.+|+..|++|+.+|
T Consensus 249 ~~~~~ll~~~~~~e~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~ 326 (326)
T 3kbt_A 249 STAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKF 326 (326)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999988775 5789999999999999999999999999999998765
No 11
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.9e-31 Score=223.03 Aligned_cols=224 Identities=20% Similarity=0.288 Sum_probs=201.7
Q ss_pred hhHHHHHHHHHchHH-HHh---HhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHH
Q psy10628 5 DGLSSLKEAFLNNDD-IGE---SLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDL 80 (238)
Q Consensus 5 ~~~~~l~~~w~~r~~-l~~---~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l 80 (238)
..|..|...+..|.. |+. +..|..++.++.+||.+++..+. .++|.|+..|+.++++|+.|+.+|.++...|+.|
T Consensus 93 ~~W~~L~~~~~~R~~~L~~a~~~~~f~~~~~e~~~Wl~~k~~~l~-~~~~~d~~~v~~l~~~h~~~~~~l~~~~~~v~~l 171 (323)
T 3edv_A 93 EAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQL 171 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-CCCCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccccChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444445543 664 33566677899999999999885 6789999999999999999999999999999999
Q ss_pred HHHHHhhHhcCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCC-CCCh
Q psy10628 81 EKFAKDLLAEHHY-DSSGIQQRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADES-YRDP 158 (238)
Q Consensus 81 ~~~~~~L~~~~~~-~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~-~~d~ 158 (238)
...|..|+...++ +++.|+.++..|+.+|+.|+..+..|+.+|+.++.++.|..+++++..||.+++..+.+.. ++|+
T Consensus 172 ~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~~~~F~~~~~~l~~Wl~~~~~~l~~~~~~~d~ 251 (323)
T 3edv_A 172 QEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRDV 251 (323)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSH
T ss_pred HHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCH
Confidence 9999999998765 6789999999999999999999999999999999999999999999999999999876654 4899
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 159 TNLQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLS 229 (238)
Q Consensus 159 ~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~ 229 (238)
..++.++.+|+.|+.||.++.+.+..+...|+.|+..+++.+..|+.++..|..+|..|..++.+|...|.
T Consensus 252 ~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~Ll~~~~~~~~~i~~~l~~L~~~w~~l~~~w~~R~~~L~ 322 (323)
T 3edv_A 252 SSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLR 322 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999885
No 12
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=100.00 E-value=8.3e-32 Score=220.73 Aligned_cols=217 Identities=23% Similarity=0.328 Sum_probs=195.5
Q ss_pred HHh-HhhhHHHHHHHHHHHHHHHhhhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchH
Q psy10628 20 IGE-SLSGVEALLRKHKAFENKEAFLNNDDI-GESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSG 97 (238)
Q Consensus 20 l~~-~l~~~~~l~~l~~WL~~~e~~l~~~~~-~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~ 97 (238)
|+. +..|...+..+++||.+++..+.+.++ |.|+..|+.++++|+.|+.+|.++.++|+.|...|+.|+..+|++++.
T Consensus 12 Le~l~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~ 91 (250)
T 1quu_A 12 LEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVN 91 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhH
Confidence 444 356667777999999999999999988 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHH
Q psy10628 98 IQQRLQAVIARKDRLKETSTARRKRLIESRQMQ--------QFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKH 168 (238)
Q Consensus 98 i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~--------~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh 168 (238)
|..++..|+.+|+.|...+..|+.+|+.++.++ +|..+++++..||.+++..+.+..+ +|++.++.++++|
T Consensus 92 I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~~~~~~d~e~v~~ll~~h 171 (250)
T 1quu_A 92 VNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAH 171 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCCSTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccccCCHHHHHHHHHHH
Confidence 999999999999999999999999999999877 9999999999999999998876654 7899999999999
Q ss_pred HHHHHHHHhhh---hhHHhHHHHHHHhhcCCCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy10628 169 AAFESELAANK---SRVGAVTAEGESLISGGHF----AAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQR 236 (238)
Q Consensus 169 ~~~~~ei~~~~---~~v~~l~~~g~~L~~~~~~----~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q 236 (238)
+.|+.++.... +.|..+...++.|+..+++ +.+.|..++..|..+|..|+.++..|...|++++..++
T Consensus 172 ~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~q~ 246 (250)
T 1quu_A 172 EQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQH 246 (250)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99996666555 5566667777888876654 56678889999999999999999999999999998775
No 13
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=100.00 E-value=6e-32 Score=216.00 Aligned_cols=198 Identities=17% Similarity=0.257 Sum_probs=183.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHHHHHH
Q psy10628 24 LSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQQRLQ 103 (238)
Q Consensus 24 l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~ 103 (238)
+.+.+ ++++||.+++..+++.++|.|+..|+.++++|+.|+.+|.++...|..+...|..|...+ ...|..++.
T Consensus 11 ~r~~~---dl~~Wl~e~~~~l~s~d~G~Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~---~~~i~~rl~ 84 (210)
T 3pdy_A 11 LRYLQ---DLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPAT---RGAYRDCLG 84 (210)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHH---HHHHHHHHH
T ss_pred hhhHH---HHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc---hHHHHHHHH
Confidence 45555 999999999999999999999999999999999999999999999999999998886432 346999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHhhhhhH
Q psy10628 104 AVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAANKSRV 182 (238)
Q Consensus 104 ~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~~~~~v 182 (238)
.|..+|..|+..+..|+.+|+ .++.|+++++++..||.+++..+.+..+ .|...+..++++|+.|+.|+.++.++|
T Consensus 85 ~l~~~~~~L~~~a~~R~~~L~---~L~~f~~~~~~~~~Wl~eke~~~~s~d~g~~~~~v~~l~~k~~~f~~el~~~~~~v 161 (210)
T 3pdy_A 85 RLDLQYAKLLNSSKARLRSLE---SLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKI 161 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHSCCSTTSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHccccCCCchhHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999 6799999999999999999998876666 466899999999999999999999999
Q ss_pred HhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 183 GAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSD 230 (238)
Q Consensus 183 ~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~ 230 (238)
..|+..|+.|+..+||+++.|..+.+.|+.+|..|.+++..|...|.+
T Consensus 162 ~~l~~~~~~Ll~~~h~~~~~I~~~~~~l~~~W~~L~~L~~~~e~hLk~ 209 (210)
T 3pdy_A 162 KELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKE 209 (210)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999988754
No 14
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=100.00 E-value=1.4e-32 Score=221.74 Aligned_cols=195 Identities=17% Similarity=0.241 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHHHHHHHHHHHH
Q psy10628 30 LLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQQRLQAVIARK 109 (238)
Q Consensus 30 l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~L~~rw 109 (238)
+.++++||.+++..|.+.++|.|+..|+.++++|+.|+.+|.++.++|..+...+..+.. +.++.|..++..|+.+|
T Consensus 29 ~~~l~~Wl~e~e~~l~s~d~g~Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~---~~~~~i~~~~~~l~~~~ 105 (224)
T 2iak_A 29 VQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTA---PLKLSYTDKLHRLESQY 105 (224)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCT---THHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---chhHHHHHHHHHHHHHH
Confidence 458999999999999999999999999999999999999999999999999877666543 45788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHhhhhhHHhHHHH
Q psy10628 110 DRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAANKSRVGAVTAE 188 (238)
Q Consensus 110 ~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~ 188 (238)
..|+..+..|+.+|+ .+++|.++++++..||.+++..+.+..+ .|+..|+.++++|+.|++||.++.+.|..|...
T Consensus 106 ~~L~~~~~~R~~~Le---~l~~F~~~~~~~~~Wi~eke~~~~s~d~g~~l~~v~~L~~kh~~l~~el~~~~~~v~~v~~~ 182 (224)
T 2iak_A 106 AKLLNTSRNQERHLD---TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEI 182 (224)
T ss_dssp HHTTTHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCC---------------CSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 999999999999999 7899999999999999999999877766 578999999999999999999999999999999
Q ss_pred HHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 189 GESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSD 230 (238)
Q Consensus 189 g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~ 230 (238)
|+.|+..+||+++.|..+++.|..+|..|...+..|...|++
T Consensus 183 g~~L~~~~h~~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~~ 224 (224)
T 2iak_A 183 AEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224 (224)
T ss_dssp HHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999998864
No 15
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.97 E-value=1.9e-28 Score=214.31 Aligned_cols=196 Identities=15% Similarity=0.191 Sum_probs=180.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHHHHHH
Q psy10628 24 LSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQQRLQ 103 (238)
Q Consensus 24 l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~ 103 (238)
+.+.+ ++.+||.+++..|.+.++|.|+..|+.++++|+.|+.+|.++...|+.+...+. . ...+.
T Consensus 8 ~r~v~---dl~~Wl~E~~~~L~S~d~GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~--------~----~~~~~ 72 (450)
T 3r6n_A 8 KHVTS---ECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLR--------E----KSAIY 72 (450)
T ss_dssp HHHHH---HHHHHHHHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------C----HHHHH
T ss_pred hccHH---HHHHHHHHHHHhcCccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------C----cHHHH
Confidence 34455 899999999999999999999999999999999999999999999998876631 1 23578
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCCC-ChhhHHHHHHHHHHHHHHHHhhhhhH
Q psy10628 104 AVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESYR-DPTNLQSKIQKHAAFESELAANKSRV 182 (238)
Q Consensus 104 ~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~~-d~~~i~~~l~kh~~~~~ei~~~~~~v 182 (238)
.|..+|..|...+..|+.+|+ .+++|++++++...||.+++..+.+..+| ++..|..++++|++|+.||.++.+.+
T Consensus 73 ~L~~~y~~L~~~a~~Rr~~Le---~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~~e~~i 149 (450)
T 3r6n_A 73 QLEEEYENLLKASFERMDHLR---QLQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKEL 149 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHHchHHH
Confidence 899999999999999999998 57899999999999999999998877765 56778888999999999999999999
Q ss_pred HhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 183 GAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 183 ~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
..|...|+.|+..+||+++.|+.+++.|...|+.|.+++..|...|..+..++||
T Consensus 150 ~~v~~~G~~Li~~~Hpas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF 204 (450)
T 3r6n_A 150 NKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQF 204 (450)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999999999999999999999999987
No 16
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.97 E-value=3.9e-28 Score=215.86 Aligned_cols=211 Identities=22% Similarity=0.321 Sum_probs=195.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHHHHH
Q psy10628 24 LSGVEALLRKHKAFENKEAFLNNDDI-GESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQQRL 102 (238)
Q Consensus 24 l~~~~~l~~l~~WL~~~e~~l~~~~~-~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l 102 (238)
..|...+..+.+||.+++..+.+.++ |.|+..|+.++++|+.|+.+|.++..+|..|...|+.|+..++++++.|..++
T Consensus 134 ~~f~~~~~~~~~Wl~e~e~~l~~~~~~g~dl~~v~~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~ 213 (476)
T 1hci_A 134 EKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRC 213 (476)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHCCGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCcCcchhHHHHHH
Confidence 45666778999999999999998888 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHH
Q psy10628 103 QAVIARKDRLKETSTARRKRLIESRQMQ--------QFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFES 173 (238)
Q Consensus 103 ~~L~~rw~~L~~~~~~r~~~L~~~~~l~--------~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ 173 (238)
..|+.+|+.|+..+..|+.+|+.++.++ +|..++.++..||.+++..+.+..+ +|++.++.++++|+.|+.
T Consensus 214 ~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~ 293 (476)
T 1hci_A 214 QKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKA 293 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998766 7999999999999999998877654 799999999999999999
Q ss_pred HHHhhhhhHHhH---HHHHHHhhcCCCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10628 174 ELAANKSRVGAV---TAEGESLISGGHF----AAAEIKTRLDELELEWRQLQESSALKRERLSDAYQT 234 (238)
Q Consensus 174 ei~~~~~~v~~l---~~~g~~L~~~~~~----~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~ 234 (238)
+|..+.+.+..+ ...|+.|+..+++ ..+.|...+..|..+|..|..++..|...|+.++..
T Consensus 294 ~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~~ 361 (476)
T 1hci_A 294 TLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELAR 361 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCSCCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999877766 7788999987775 567899999999999999999999999999999874
No 17
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.95 E-value=3.7e-27 Score=180.44 Aligned_cols=140 Identities=34% Similarity=0.513 Sum_probs=135.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCCCChhhHHHHHHHHHHHH
Q psy10628 93 YDSSGIQQRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESYRDPTNLQSKIQKHAAFE 172 (238)
Q Consensus 93 ~~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~~d~~~i~~~l~kh~~~~ 172 (238)
.+++.|+.+++.|+.+|..|+..+..|+.+|++++.+++|+.+++++..||.+++.++++++++|+..|+.++++|++|+
T Consensus 22 e~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~~lq~F~~d~~el~~Wi~ek~~~a~~~~~~d~~~v~~ll~kH~afe 101 (161)
T 3lbx_A 22 ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSYEDPTNIQGKYQKHQSLE 101 (161)
T ss_dssp CCSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcCCHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred HHHHhhhhhHHhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 173 SELAANKSRVGAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAY 232 (238)
Q Consensus 173 ~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~ 232 (238)
+||.++.+.+..|...|+.|+..+|+.++.|+.++++|+.+|..|...+..|+.+|.+|+
T Consensus 102 ~El~a~~~~~~~l~~~g~~Li~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eAl 161 (161)
T 3lbx_A 102 AEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL 161 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999874
No 18
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.95 E-value=1.1e-26 Score=182.04 Aligned_cols=167 Identities=22% Similarity=0.319 Sum_probs=154.6
Q ss_pred HHHhHhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHH
Q psy10628 19 DIGESLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGI 98 (238)
Q Consensus 19 ~l~~~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i 98 (238)
.|+.|+.... ++..||.+++..+++.++|.|+..++.++++|+.|+.+|.++...|..+...|+.|+..++++++.|
T Consensus 5 dl~~F~~~~~---dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~~~~~i 81 (185)
T 3lbx_B 5 DKFRFFSMAR---DLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQASEEI 81 (185)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHH
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 3566666666 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHh
Q psy10628 99 QQRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAA 177 (238)
Q Consensus 99 ~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~ 177 (238)
+.++..|+.+|+.|...+..|+.+|+.+++++.|.++++++..||..++..+.+.++ ++++.|+.++++|+.|+.++.+
T Consensus 82 ~~~l~~L~~~w~~L~~~w~~r~~~L~~~l~l~~F~~d~~~~~~Wl~~~e~~L~~~~~g~sl~~ve~LlkkH~~fe~~l~~ 161 (185)
T 3lbx_B 82 REKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTAS 161 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998877655 6899999999999999999999
Q ss_pred hhhhHHhHHHH
Q psy10628 178 NKSRVGAVTAE 188 (238)
Q Consensus 178 ~~~~v~~l~~~ 188 (238)
+.+.|..|...
T Consensus 162 ~~e~i~~L~~~ 172 (185)
T 3lbx_B 162 WAERFAALEKP 172 (185)
T ss_dssp THHHHHHHHSC
T ss_pred hHHHHHHHhhh
Confidence 99999988643
No 19
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.95 E-value=2.4e-26 Score=217.74 Aligned_cols=214 Identities=19% Similarity=0.268 Sum_probs=193.7
Q ss_pred HHh-HhhhHHHHHHHHHHHHHHHhhhcCCCCCC-CHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchH
Q psy10628 20 IGE-SLSGVEALLRKHKAFENKEAFLNNDDIGE-SLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSG 97 (238)
Q Consensus 20 l~~-~l~~~~~l~~l~~WL~~~e~~l~~~~~~~-~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~ 97 (238)
|++ +..|...+.+++.||.+++..+.+.++|. +++.|+.++++|+.|+.+|.++..+|..|...|+.|+..++++++.
T Consensus 368 Le~l~~~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~ 447 (863)
T 1sjj_A 368 LDHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPS 447 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHH
Confidence 443 34566678899999999999999998987 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHH
Q psy10628 98 IQQRLQAVIARKDRLKETSTARRKRLIESRQMQ--------QFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKH 168 (238)
Q Consensus 98 i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~--------~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh 168 (238)
|..++..|+.+|+.|+..+..|+.+|+.++.++ +|..+++++..||.+++..+++..+ .|++.++.++++|
T Consensus 448 I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f~~~a~~~~~Wl~~~e~~l~~~~~g~dl~~ve~ll~kh 527 (863)
T 1sjj_A 448 VNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAH 527 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHCCCCCSSSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhccHHHHHHHHHHH
Confidence 999999999999999999999999999999776 8999999999999999998877655 7999999999999
Q ss_pred HHHHHHHHhhhhhHHhHHHHHHHhhcC-------CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 169 AAFESELAANKSRVGAVTAEGESLISG-------GHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAYQ 233 (238)
Q Consensus 169 ~~~~~ei~~~~~~v~~l~~~g~~L~~~-------~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~ 233 (238)
+.|+.+|.++.+.+..+...++.|... ++...+.+..++..|..+|..|..++..|+.+|+++++
T Consensus 528 ~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~ 599 (863)
T 1sjj_A 528 EQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHA 599 (863)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888661 22233455667999999999999999999999999884
No 20
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.94 E-value=5.5e-26 Score=171.85 Aligned_cols=137 Identities=45% Similarity=0.646 Sum_probs=132.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCCCChhhHHHHHHHHHHHH
Q psy10628 93 YDSSGIQQRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESYRDPTNLQSKIQKHAAFE 172 (238)
Q Consensus 93 ~~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~~d~~~i~~~l~kh~~~~ 172 (238)
..++.|+.++..|..+|..|+..+.+|+.+|++++.++.|..+++++..||.+++.++.+++++|+..|+.++++|++|+
T Consensus 12 ~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~l~~F~~d~~el~~Wi~ek~~~~~~~~~~d~~~v~~~l~kH~afe 91 (149)
T 3f31_A 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFE 91 (149)
T ss_dssp -CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSCSSSCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred HHHHhhhhhHHhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 173 SELAANKSRVGAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLS 229 (238)
Q Consensus 173 ~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~ 229 (238)
+||.++.+.+..|...|+.|+..+|++++.|+.++++|+.+|..|...+.+|..+|.
T Consensus 92 ~El~a~~~~l~~v~~~g~~Li~~~~~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 92 AEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999885
No 21
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.93 E-value=6.1e-24 Score=185.90 Aligned_cols=228 Identities=11% Similarity=0.056 Sum_probs=199.2
Q ss_pred HHHHHHHch-HHHHhHhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhh
Q psy10628 9 SLKEAFLNN-DDIGESLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDL 87 (238)
Q Consensus 9 ~l~~~w~~r-~~l~~~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L 87 (238)
.|.+....| ..|..+..|..+..+.+.||.+++..+.+.++|.++..|..++++|+.|+.+|.++..++..|...|+.|
T Consensus 80 ~L~~~a~~Rr~~Le~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~G~~L 159 (450)
T 3r6n_A 80 NLLKASFERMDHLRQLQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQL 159 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHH
Confidence 333333334 3477766777777799999999999999999998777788899999999999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCC---CC-CChhhHHH
Q psy10628 88 LAEHHYDSSGIQQRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADE---SY-RDPTNLQS 163 (238)
Q Consensus 88 ~~~~~~~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~---~~-~d~~~i~~ 163 (238)
+..+||.++.|+.+++.|+..|+.|..++..|+.+|..+..+++|+.+++++.+||.+++..+.+. .+ .|...++.
T Consensus 160 i~~~Hpas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF~~Da~EaesWL~eke~~l~s~y~~D~g~d~~~~e~ 239 (450)
T 3r6n_A 160 VLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLE 239 (450)
T ss_dssp HHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTTCCHHHHHH
T ss_pred HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcccccCcCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999987554 33 57899999
Q ss_pred HHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcC---C--------------------------------------------
Q psy10628 164 KIQKHAAFESELAANKSRVGAVTAEGESLISG---G-------------------------------------------- 196 (238)
Q Consensus 164 ~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~---~-------------------------------------------- 196 (238)
++++|..|+.+|.+.+..|..|...++.|+.. .
T Consensus 240 LLkkh~~le~~l~~~~~~I~~L~~qA~~l~~l~~r~~~~~~~~~~~V~alcdy~~~e~~i~kge~~~L~~ns~~~~W~V~ 319 (450)
T 3r6n_A 240 QIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNNERSKWYVT 319 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGSTTCCCSSCCEEEESSCEEETTEEECTTCEEEEEECSSSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCcccCCCceEEEeccccCCeeeEecCCEEEEecCCCCCceEEe
Confidence 99999999999999999999999999998730 0
Q ss_pred -----------------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 197 -----------------HFAAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 197 -----------------~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
||+ +..-...+.|...|+.|..++..+..++......++|
T Consensus 320 ~~~G~~~~vPavcf~ipppd-~eai~~a~~l~~~~~~~~~lw~~~~~~~~~~~~~~~~ 376 (450)
T 3r6n_A 320 GPGGVDMLVPSVGLIIPPPN-PLAVDLSCKIEQYYEAILALWNQLYINMKSLVSWHYC 376 (450)
T ss_dssp CSSSCCEEEEGGGEECCSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeeccceeEEecCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012 3455668999999999999999999999988776654
No 22
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.93 E-value=6.2e-24 Score=188.75 Aligned_cols=205 Identities=13% Similarity=0.197 Sum_probs=179.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHH---HHHHHhhHhcCCC----CchH
Q psy10628 25 SGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDL---EKFAKDLLAEHHY----DSSG 97 (238)
Q Consensus 25 ~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l---~~~~~~L~~~~~~----~~~~ 97 (238)
.|..++..+.+||.+++..+.+.++|.|++.++.++++|+.|+.+|.++...+..+ ...|+.|+..+++ +.+.
T Consensus 250 ~f~~~a~~~~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~ 329 (476)
T 1hci_A 250 EFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPY 329 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCSCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCcc
Confidence 34456778999999999999999999999999999999999999999988877777 6788999988775 6778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHhHHHHHHHHhhCCCCCChhhHHHHHHHHH
Q psy10628 98 IQQRLQAVIARKDRLKETSTARRKRLIESRQM--------QQFLRNMYEVGGWILQKQQICADESYRDPTNLQSKIQKHA 169 (238)
Q Consensus 98 i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l--------~~f~~~~~~~~~WL~~~~~~l~~~~~~d~~~i~~~l~kh~ 169 (238)
|..++..|+.+|+.|+..+..|+.+|+.++.. +.|..+++++..||.+++..+.+++++.+..++.++++|+
T Consensus 330 i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~L~~~F~~~a~~~~~Wl~e~e~~l~~~~~~~~~~le~~l~~~~ 409 (476)
T 1hci_A 330 STVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQITGALEDQMNQLK 409 (476)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTTTSTHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999863 5899999999999999999988765666788899999999
Q ss_pred HHHHHHHhhhhhHHhHHHHHHHhhc---CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 170 AFESELAANKSRVGAVTAEGESLIS---GGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAY 232 (238)
Q Consensus 170 ~~~~ei~~~~~~v~~l~~~g~~L~~---~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~ 232 (238)
.|+.+|.++.+.+..|...|+.+.. .++|.+. ..+..|+.+|..|...+.+|...|+...
T Consensus 410 ~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~---~~~~~l~~~W~~L~~~~~~~~~~lE~~i 472 (476)
T 1hci_A 410 QYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTN---YTMEHIRVGWELLLTTIARTINEVETQI 472 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCS---CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhcccCCCcch---hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998887754 2233222 5688999999999999999999999764
No 23
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.92 E-value=3.1e-24 Score=178.14 Aligned_cols=175 Identities=14% Similarity=0.140 Sum_probs=158.9
Q ss_pred HHhHhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHH
Q psy10628 20 IGESLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQ 99 (238)
Q Consensus 20 l~~~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~ 99 (238)
|.+|+.+.+ +.+.||.+++......++++....+...+++|+.|+.+|.+|+.+|+.|...|+.|+..+|++++.|+
T Consensus 10 L~qF~~d~~---~e~~Wi~Eke~~~~~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~hp~~~~I~ 86 (283)
T 3pe0_A 10 LHSFVAAAT---KELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVE 86 (283)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHTCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTHHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHhHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 455555555 99999999999987788876554588899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH---HHHHHhhCCCC-CChhhHHHHHHHHHHHHHHH
Q psy10628 100 QRLQAVIARKDRLKETSTARRKRLIESRQMQQFLRNMYEVGGWIL---QKQQICADESY-RDPTNLQSKIQKHAAFESEL 175 (238)
Q Consensus 100 ~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l~~f~~~~~~~~~WL~---~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei 175 (238)
.+++.|+..|+.|...+..|+.+|..+..+++|+.+++++.+||. ++...+.++.+ .|...++.++++|+.|+.+|
T Consensus 87 ~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~qF~~da~e~e~Wl~~~~e~~~~~~s~d~g~d~~s~~~LLkkh~~le~~l 166 (283)
T 3pe0_A 87 SFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQL 166 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887 77776766655 68999999999999999999
Q ss_pred HhhhhhHHhHHHHHHHhhcCCC
Q psy10628 176 AANKSRVGAVTAEGESLISGGH 197 (238)
Q Consensus 176 ~~~~~~v~~l~~~g~~L~~~~~ 197 (238)
.++...|..|...|+.|+..++
T Consensus 167 ~~~~~~i~~L~~~a~~l~~l~~ 188 (283)
T 3pe0_A 167 NEYKGHLSGLAKRAKAVVQLKP 188 (283)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGG
T ss_pred HHHHHHHHHHHHHHHHhhcccC
Confidence 9999999999999999987443
No 24
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.87 E-value=1.2e-20 Score=178.75 Aligned_cols=208 Identities=15% Similarity=0.226 Sum_probs=169.2
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-H---hhHHHH-HHHHHhhHhcCCC-CchHHH
Q psy10628 26 GVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQ-L---SRIDDL-EKFAKDLLAEHHY-DSSGIQ 99 (238)
Q Consensus 26 ~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~-~---~~v~~l-~~~~~~L~~~~~~-~~~~i~ 99 (238)
|...+.++..||..++..+.+.++|.++..++.++++|..|+....+- . ..++.+ ...+..+...+.+ -.+...
T Consensus 255 y~~~~~el~~Wi~~~~~~l~~~~~~~~l~~v~~~l~~~~~~~~~~k~~~~~e~~~le~~~~~l~~~l~~~~~~~~~~~~~ 334 (863)
T 1sjj_A 255 YEKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEG 334 (863)
T ss_dssp HHHHHHHHHHHHHHHGGGSSCCCCCSSHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHTTTHHHHHTTTTSSCCCCCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcCCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Confidence 444567899999999999999999999999999999999999976431 1 122222 2233334332221 112234
Q ss_pred HHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-C-ChhhHHHHHHH
Q psy10628 100 QRLQAVIARKDRLKETST----------ARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY-R-DPTNLQSKIQK 167 (238)
Q Consensus 100 ~~l~~L~~rw~~L~~~~~----------~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~-d~~~i~~~l~k 167 (238)
..+..|+.+|+.|..... .|+.+|+. .+.+|..+++++..||.+++..+++..+ . |+..|+.++++
T Consensus 335 ~~~~~i~~~w~~L~~~~~~r~~~l~~~~~R~~~Le~--l~~~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~k 412 (863)
T 1sjj_A 335 KMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDH--LAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKK 412 (863)
T ss_dssp SCGGGHHHHHHHHHHHHTTTHHHHHHHHEEHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHH
Confidence 456778888888887754 45666665 3578999999999999999999877655 3 89999999999
Q ss_pred HHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10628 168 HAAFESELAANKSRVGAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQ 235 (238)
Q Consensus 168 h~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~ 235 (238)
|++|+.+|.++.+.|..|...|+.|+..++++++.|..+++.|..+|..|...+..|+.+|++++.++
T Consensus 413 h~~f~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~ 480 (863)
T 1sjj_A 413 HEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLL 480 (863)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887
No 25
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.80 E-value=9.5e-19 Score=166.21 Aligned_cols=214 Identities=14% Similarity=0.221 Sum_probs=177.6
Q ss_pred HhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHH----hHhhHHHHHHHHHhhHh---cCCCCc
Q psy10628 23 SLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEA----QLSRIDDLEKFAKDLLA---EHHYDS 95 (238)
Q Consensus 23 ~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~----~~~~v~~l~~~~~~L~~---~~~~~~ 95 (238)
.++|......+..|+......+...+++.++..++..++.|+.|+.+... ....++.+....+.-+. ..++.+
T Consensus 768 ~iQY~~~a~~L~~WIr~kqa~l~~r~~~~sl~~IQ~ll~~f~~fk~~~kp~r~~ek~~Le~l~~~iqtklrl~~r~~~~p 847 (1010)
T 1g8x_A 768 KSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVA 847 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 34555566789999999999999999999999999999999999987654 12233333222222122 222222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHH
Q psy10628 96 SGIQQRLQAVIARKDRLKETSTARRKRLIESRQ--------MQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQ 166 (238)
Q Consensus 96 ~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~--------l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~ 166 (238)
+ .......|+.+|..|.....+|...|...+. .++|.++++.+.+||.+++..+++..+ .|+..|+++++
T Consensus 848 ~-~gl~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~d~g~dL~~Vqal~K 926 (1010)
T 1g8x_A 848 P-AGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLK 926 (1010)
T ss_dssp C-TTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSCCSCCSTTTTGGGTT
T ss_pred c-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHH
Confidence 2 2345689999999999999999999998753 368999999999999999999987766 57999999999
Q ss_pred HHHHHHHHHHhhhhhHH-hHHHHHHHhhcCCCCChHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 167 KHAAFESELAANKSRVG-AVTAEGESLISGGHFAAAEIKTRLDELE-LEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 167 kh~~~~~ei~~~~~~v~-~l~~~g~~L~~~~~~~~~~i~~~~~~l~-~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
+|++|+++|.+++++|. .|...|+.|++.++++++.|..+.+.|. .+|+.|.+++..|+..|+++++++|+
T Consensus 927 Khea~e~dl~a~e~ri~~~l~~~a~eL~~~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq~~~~ 999 (1010)
T 1g8x_A 927 NLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQK 999 (1010)
T ss_dssp SHHHHTTTTTHHHHTHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTSTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 8999999999999999999999999996 89999999999999999999999885
No 26
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.79 E-value=4.8e-18 Score=122.88 Aligned_cols=110 Identities=25% Similarity=0.464 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhC-C-CCCChhhHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCCh---HH
Q psy10628 128 QMQQFLRNMYEVGGWILQKQQICAD-E-SYRDPTNLQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHFAA---AE 202 (238)
Q Consensus 128 ~l~~f~~~~~~~~~WL~~~~~~l~~-~-~~~d~~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~~---~~ 202 (238)
.++.|..+++++..||.+++..+.+ . +++|+..|+.++++|+.|+.+|.++++.|+.|+..|+.|+..+++.. ..
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~ 82 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFE 82 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH
Confidence 4789999999999999999987754 3 45899999999999999999999999999999999999999887754 46
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 203 IKTRLDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 203 i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
|+.+++.|+.+|..|+..+.+|...|+.|+..+|-
T Consensus 83 i~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~~Qk 117 (118)
T 3uul_A 83 IQEQMTLLNARWEALRVESMERQSRLHDALMELQK 117 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999988774
No 27
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.79 E-value=6.1e-18 Score=122.39 Aligned_cols=111 Identities=21% Similarity=0.416 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhC--CCCCChhhHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCC---hH
Q psy10628 127 RQMQQFLRNMYEVGGWILQKQQICAD--ESYRDPTNLQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHFA---AA 201 (238)
Q Consensus 127 ~~l~~f~~~~~~~~~WL~~~~~~l~~--~~~~d~~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~---~~ 201 (238)
+.+++|..+++++..||.+++..+.+ ++++|+..|..++.+|+.|+.+|.++++.|+.|+..|+.|+..++++ +.
T Consensus 2 l~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~ 81 (119)
T 3uun_A 2 VNLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEET 81 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 45789999999999999999987643 44589999999999999999999999999999999999999877665 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 202 EIKTRLDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 202 ~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
.|+.+++.|+.+|..|+..+.+|...|+.|+..+|.
T Consensus 82 ~i~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~Q~ 117 (119)
T 3uun_A 82 EVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQN 117 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 799999999999999999999999999999988774
No 28
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.76 E-value=2.1e-17 Score=131.71 Aligned_cols=125 Identities=18% Similarity=0.205 Sum_probs=112.0
Q ss_pred chhhHHHHHHHHHchHH-HHhH---hhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHH
Q psy10628 3 GDDGLSSLKEAFLNNDD-IGES---LSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRID 78 (238)
Q Consensus 3 ~~~~~~~l~~~w~~r~~-l~~~---l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~ 78 (238)
+.+.|..|...|..|.. |++. ..|..++.+++.||.+.|..+.+.++|.+++.|+.++++|+.|+.+|.++..+|.
T Consensus 85 L~~~w~~L~~~~~~r~~~L~~~l~l~~F~~~~~~~~~Wl~~~E~~l~~~~~g~~~~~v~~llkkh~~f~~~l~~~~~~i~ 164 (214)
T 1s35_A 85 LDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVL 164 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 45667777777777765 6653 3455677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 79 DLEKFAKDLLAEHHYDSSGIQQRLQAVIARKDRLKETSTARRKRLIESR 127 (238)
Q Consensus 79 ~l~~~~~~L~~~~~~~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~ 127 (238)
.|...|+.|+..+||+++.|..++..|+.+|+.|...+.+|+..|+.++
T Consensus 165 ~l~~~a~~L~~~~h~~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 165 SPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998764
No 29
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.75 E-value=6.1e-17 Score=117.00 Aligned_cols=104 Identities=21% Similarity=0.256 Sum_probs=94.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCC---chHHHH
Q psy10628 25 SGVEALLRKHKAFENKEAFLNND-DIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYD---SSGIQQ 100 (238)
Q Consensus 25 ~~~~~l~~l~~WL~~~e~~l~~~-~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~---~~~i~~ 100 (238)
.|.+++.++..||.++|..+.+. ++|.+++.++.++++|+.|+.+|.++++.|+.|+..|..|+..+++. +..|+.
T Consensus 6 ~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i~~ 85 (118)
T 3uul_A 6 SYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEIQE 85 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHH
Confidence 35556669999999999999875 46899999999999999999999999999999999999999987764 457999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 101 RLQAVIARKDRLKETSTARRKRLIESRQ 128 (238)
Q Consensus 101 ~l~~L~~rw~~L~~~~~~r~~~L~~~~~ 128 (238)
++..|+.+|+.|+..+.+|+.+|+.++.
T Consensus 86 ~l~~l~~rw~~L~~~~~~R~~~L~~aL~ 113 (118)
T 3uul_A 86 QMTLLNARWEALRVESMERQSRLHDALM 113 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999873
No 30
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.75 E-value=4.9e-17 Score=129.70 Aligned_cols=123 Identities=25% Similarity=0.332 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHchHH-HHh---HhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHH
Q psy10628 5 DGLSSLKEAFLNNDD-IGE---SLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDL 80 (238)
Q Consensus 5 ~~~~~l~~~w~~r~~-l~~---~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l 80 (238)
..|..|...|..|.. |+. +..|..++.++..||.+++..+.+.++|.|+..|+.++++|+.|+.+|.++.+.|..|
T Consensus 89 ~~w~~L~~~~~~R~~~Le~~~~l~qf~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~kh~~~~~el~~~~~~i~~l 168 (216)
T 1u5p_A 89 GRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGV 168 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 445556666665543 664 4456667889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 81 EKFAKDLLAEHHYDSSGIQQRLQAVIARKDRLKETSTARRKRLIESR 127 (238)
Q Consensus 81 ~~~~~~L~~~~~~~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~ 127 (238)
...|+.|+..+|++++.|+.++..|+.+|+.|+..+..|+.+|+.++
T Consensus 169 ~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al 215 (216)
T 1u5p_A 169 LDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESL 215 (216)
T ss_dssp HHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998875
No 31
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=99.75 E-value=1.6e-18 Score=123.47 Aligned_cols=104 Identities=20% Similarity=0.448 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCChHHHH
Q psy10628 126 SRQMQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHFAAAEIK 204 (238)
Q Consensus 126 ~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~ 204 (238)
+++++.|.++++++..||.+++..+++..+ .|+..|+.++++|+.|+.+|.++.++|..|...|+.|+..+||+++.|.
T Consensus 2 ~~~lq~F~~d~~~~e~Wl~~~e~~l~~~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~~~~~I~ 81 (107)
T 2spc_A 2 NLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVD 81 (107)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 467899999999999999999988765544 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 205 TRLDELELEWRQLQESSALKRERLS 229 (238)
Q Consensus 205 ~~~~~l~~~W~~L~~~~~~r~~~L~ 229 (238)
.+++.|..+|..|...+..|+..|+
T Consensus 82 ~r~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 82 EKRKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999885
No 32
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.74 E-value=2.6e-17 Score=136.49 Aligned_cols=117 Identities=14% Similarity=0.246 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCCCChh-hHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCC
Q psy10628 121 KRLIESRQMQQFLRNMYEVGGWILQKQQICADESYRDPT-NLQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHFA 199 (238)
Q Consensus 121 ~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~~d~~-~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~ 199 (238)
.+|..+..+++|+++|++.+.||.+++....+.++++.. .+..++++|++|++||.+|+++|..|...|+.|+..+||+
T Consensus 2 ~rL~~l~~L~qF~~d~~~e~~Wi~Eke~~~~~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~hp~ 81 (283)
T 3pe0_A 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPA 81 (283)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCC
Confidence 367777889999999999999999999997777776654 4999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 200 AAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 200 ~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
++.|..+++.|...|..|.+++..|...|.++..++||
T Consensus 82 ~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~qF 119 (283)
T 3pe0_A 82 RPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQF 119 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987
No 33
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.74 E-value=4.2e-17 Score=133.15 Aligned_cols=117 Identities=26% Similarity=0.373 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhCCCC--CChhhHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhc
Q psy10628 117 TARRKRLIESRQMQQFLRNMYEVGGWILQKQQICADESY--RDPTNLQSKIQKHAAFESELAANKSRVGAVTAEGESLIS 194 (238)
Q Consensus 117 ~~r~~~L~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~~--~d~~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~ 194 (238)
..|..+|+.. +++|..+++++.+||.+++..+++.++ +|+..|+.++++|++|+.+|.++.+.|..|...|+.|+.
T Consensus 6 ~~R~~kLe~l--~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~ 83 (250)
T 1quu_A 6 IRRLERLEHL--AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNE 83 (250)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3678888887 689999999999999999999876544 699999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10628 195 GGHFAAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQ 235 (238)
Q Consensus 195 ~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~ 235 (238)
.++++++.|..+++.|..+|..|...+..|+..|++++.++
T Consensus 84 ~~~~~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~ 124 (250)
T 1quu_A 84 LDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLL 124 (250)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987
No 34
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.74 E-value=6e-17 Score=117.12 Aligned_cols=107 Identities=14% Similarity=0.228 Sum_probs=95.3
Q ss_pred HHhHhhhHHHHHHHHHHHHHHHhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCC---c
Q psy10628 20 IGESLSGVEALLRKHKAFENKEAFLNND-DIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYD---S 95 (238)
Q Consensus 20 l~~~l~~~~~l~~l~~WL~~~e~~l~~~-~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~---~ 95 (238)
|++|... +.++.+||.++|..+.+. ++|.+++.++.++++|+.|+.+|.++++.|+.|+..|..|+..++++ +
T Consensus 4 L~~F~~~---l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~ 80 (119)
T 3uun_A 4 LDRYQTA---LEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEE 80 (119)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHH
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 4444444 449999999999999775 56899999999999999999999999999999999999999987764 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 96 SGIQQRLQAVIARKDRLKETSTARRKRLIESRQM 129 (238)
Q Consensus 96 ~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~l 129 (238)
..|+.++..|+.+|+.|+..+.+|+.+|+.++..
T Consensus 81 ~~i~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~ 114 (119)
T 3uun_A 81 TEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMD 114 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999843
No 35
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.74 E-value=3.7e-17 Score=124.75 Aligned_cols=123 Identities=15% Similarity=0.173 Sum_probs=107.5
Q ss_pred hhhHHHHHHHHHchHH-HHhH---hhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHH
Q psy10628 4 DDGLSSLKEAFLNNDD-IGES---LSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDD 79 (238)
Q Consensus 4 ~~~~~~l~~~w~~r~~-l~~~---l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~ 79 (238)
...+..|.+.+..|.. |++. ..|..++.++..||.+++..+.+.++ .|+..|+.++++|+.|+.+|.++...++.
T Consensus 35 ~~rw~~L~~~a~~R~~~Le~s~~lq~F~~d~~el~~Wi~ek~~~a~~~~~-~d~~~v~~ll~kH~afe~El~a~~~~~~~ 113 (161)
T 3lbx_A 35 LTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSY-EDPTNIQGKYQKHQSLEAEVQTKSRLMSE 113 (161)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677777776643 6653 34555777999999999998887777 78999999999999999999999999999
Q ss_pred HHHHHHhhHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 80 LEKFAKDLLAEHHYDSSGIQQRLQAVIARKDRLKETSTARRKRLIESR 127 (238)
Q Consensus 80 l~~~~~~L~~~~~~~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~ 127 (238)
|...|+.|+..+|++++.|+.+++.|+.+|+.|+..+..|+.+|.+++
T Consensus 114 l~~~g~~Li~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eAl 161 (161)
T 3lbx_A 114 LEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL 161 (161)
T ss_dssp HHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999998763
No 36
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.74 E-value=6.1e-17 Score=128.79 Aligned_cols=109 Identities=30% Similarity=0.554 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCChHHHHHHH
Q psy10628 129 MQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHFAAAEIKTRL 207 (238)
Q Consensus 129 l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~ 207 (238)
+++|..+++++..||.+++..++++++ +|+..|+.++++|+.|+.+|.++.+.|..|...|+.|+..+|++++.|..++
T Consensus 2 l~qf~~~~~~~~~Wl~e~e~~l~~~~~g~dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~i~~~~ 81 (213)
T 1cun_A 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRL 81 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred hHHHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 679999999999999999998877665 6999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 208 DELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 208 ~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
+.|+.+|..|...+..|+..|++++.+++|
T Consensus 82 ~~l~~~w~~L~~~~~~R~~~Le~~~~~~~f 111 (213)
T 1cun_A 82 AQFVDHWKELKQLAAARGQRLEESLEYQQF 111 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988776
No 37
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=99.72 E-value=3.6e-16 Score=125.60 Aligned_cols=198 Identities=13% Similarity=0.078 Sum_probs=155.1
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhH----hhHHHHHHHHHhhHhcCCCCchHHHHH
Q psy10628 26 GVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQL----SRIDDLEKFAKDLLAEHHYDSSGIQQR 101 (238)
Q Consensus 26 ~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~----~~v~~l~~~~~~L~~~~~~~~~~i~~~ 101 (238)
|...+.++..||..+...+.+..+|+++.+|+.++.++..|..+-..-+ ..++.+...-+.-+..+++.++.- ..
T Consensus 16 Ye~~as~Ll~WI~~~~~~l~~r~f~~sl~~vq~~l~~f~~fr~~ekppk~~EK~~Le~ll~~lqtklr~~~~~ppeg-~~ 94 (235)
T 2odv_A 16 YRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSLEGAVQAGQLKVPPG-YH 94 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC-CCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTT-CS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CC
Confidence 3345678999999999999999999999999999999999998777421 222322222222222333332221 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHhHHHHHHHHhhCCCCCChhhHHHHHHHHHHHHH
Q psy10628 102 LQAVIARKDRLKETSTARRKRLIESRQ--------MQQFLRNMYEVGGWILQKQQICADESYRDPTNLQSKIQKHAAFES 173 (238)
Q Consensus 102 l~~L~~rw~~L~~~~~~r~~~L~~~~~--------l~~f~~~~~~~~~WL~~~~~~l~~~~~~d~~~i~~~l~kh~~~~~ 173 (238)
...|+..|..|.....+|...|...+. ...|.+.+.....||.+++..+.+. +.+++.. ..+++|.+|+.
T Consensus 95 ~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L~~d-~~~l~~~-~a~k~~e~ie~ 172 (235)
T 2odv_A 95 PLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQSD-VRLLAAG-KVPQRAGEVER 172 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTTT-CCCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhcchh-HHHHHHHHHHH
Confidence 568999999999999999999988742 3579999999999999999988422 2233333 33688999999
Q ss_pred HHHhhhhhHHhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 174 ELAANKSRVGAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRE 226 (238)
Q Consensus 174 ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~ 226 (238)
+|.++...|..|...++.|...++++++.|..++..|..+|..|...+..|..
T Consensus 173 dL~~~e~~i~~l~~~a~~L~~~~y~~a~~i~~r~~~l~~~w~~L~~~~~~r~~ 225 (235)
T 2odv_A 173 DLDKADSMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRLK 225 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988865
No 38
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.72 E-value=1.6e-16 Score=127.09 Aligned_cols=109 Identities=28% Similarity=0.364 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHh-hhhhHHhHHHHHHHhhcCCCCChHHHHHH
Q psy10628 129 MQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAA-NKSRVGAVTAEGESLISGGHFAAAEIKTR 206 (238)
Q Consensus 129 l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~-~~~~v~~l~~~g~~L~~~~~~~~~~i~~~ 206 (238)
+++|.++++++..||.+++..+++.++ .|++.|..++++|+.|+.++.+ +.++|..|+..|+.|+..+||+++.|+.+
T Consensus 3 L~~f~~~~~~l~~Wl~~ke~~l~~~~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~ 82 (218)
T 3edu_A 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEW 82 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 679999999999999999999877665 6899999999999999999998 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 207 LDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 207 ~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
++.|+.+|..|..++..|+..|+.++.+++|
T Consensus 83 ~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~F 113 (218)
T 3edu_A 83 KDGLNEMWADLLELIDTRMQLLAASYDLHRY 113 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887765
No 39
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=99.71 E-value=6e-18 Score=120.47 Aligned_cols=102 Identities=32% Similarity=0.485 Sum_probs=95.4
Q ss_pred HHhHhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHH
Q psy10628 20 IGESLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQ 99 (238)
Q Consensus 20 l~~~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~ 99 (238)
|+.|..+.+ ++++||.+.+..+.+.++|.++..|+.++++|+.|+.+|.++..+|..|...|+.|+..+|++++.|.
T Consensus 5 lq~F~~d~~---~~e~Wl~~~e~~l~~~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~~~~~I~ 81 (107)
T 2spc_A 5 LQLYMRDCE---LAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVD 81 (107)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 444555555 99999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 100 QRLQAVIARKDRLKETSTARRKRLI 124 (238)
Q Consensus 100 ~~l~~L~~rw~~L~~~~~~r~~~L~ 124 (238)
.++..|..+|+.|...+..|+..|+
T Consensus 82 ~r~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 82 EKRKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999885
No 40
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.70 E-value=2e-16 Score=123.38 Aligned_cols=112 Identities=18% Similarity=0.285 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhCC-CCCChhhHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCChHHHH
Q psy10628 126 SRQMQQFLRNMYEVGGWILQKQQICADE-SYRDPTNLQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHFAAAEIK 204 (238)
Q Consensus 126 ~~~l~~f~~~~~~~~~WL~~~~~~l~~~-~~~d~~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~ 204 (238)
+..++.|+.++.++..||.++...+++. .+.|+..++.++.+|+.|+.+|.++.+.+..+...|+.|+..+||.++.|.
T Consensus 3 ~~dl~~F~~~~~dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~~~~~i~ 82 (185)
T 3lbx_B 3 TADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQASEEIR 82 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 5678999999999999999999987654 458999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 205 TRLDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 205 ~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
.++..|..+|..|...+..|+.+|++++.+++|
T Consensus 83 ~~l~~L~~~w~~L~~~w~~r~~~L~~~l~l~~F 115 (185)
T 3lbx_B 83 EKLQQVMSRRKEMNEKWEARWERLRMLLEVCQF 115 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988776
No 41
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.68 E-value=4.1e-16 Score=117.48 Aligned_cols=105 Identities=19% Similarity=0.263 Sum_probs=94.6
Q ss_pred HHHh---HhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCc
Q psy10628 19 DIGE---SLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDS 95 (238)
Q Consensus 19 ~l~~---~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~ 95 (238)
+|++ +..|..++.+++.||.+++..+.+.++ .|+..|+.++++|+.|+.+|.++...++.|+..|+.|+..+|+++
T Consensus 41 ~Le~s~~l~~F~~d~~el~~Wi~ek~~~~~~~~~-~d~~~v~~~l~kH~afe~El~a~~~~l~~v~~~g~~Li~~~~~~~ 119 (149)
T 3f31_A 41 KLEDSYRFQFFQRDAEELEKWIQEKLQIASDENY-KDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFAS 119 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSS-CSSSCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 4555 334555677999999999998877655 678999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 96 SGIQQRLQAVIARKDRLKETSTARRKRLI 124 (238)
Q Consensus 96 ~~i~~~l~~L~~rw~~L~~~~~~r~~~L~ 124 (238)
+.|+.+++.|+.+|+.|+..+.+|..+|.
T Consensus 120 ~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 120 ETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999885
No 42
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.68 E-value=1.4e-15 Score=121.65 Aligned_cols=114 Identities=25% Similarity=0.436 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHhhCCC-CCChhhHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCChHH
Q psy10628 124 IESRQMQQFLRNMYEVGGWILQKQQICADES-YRDPTNLQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHFAAAE 202 (238)
Q Consensus 124 ~~~~~l~~f~~~~~~~~~WL~~~~~~l~~~~-~~d~~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~ 202 (238)
..++.++.|..++.++..||.+++..+++.+ ++|+..++.++.+|+.|+.+|.++.+.+..+...|+.|+..++|+++.
T Consensus 10 ~~~~~~~~F~~~~~~l~~Wl~~~~~~l~~~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~~~~~ 89 (218)
T 3fb2_A 10 HDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPE 89 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCTTHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCchHH
Confidence 3567889999999999999999999886654 589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 203 IKTRLDELELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 203 i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
|+.++..|..+|..|...+..|+..|++++.+++|
T Consensus 90 i~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~l~~F 124 (218)
T 3fb2_A 90 IKQKLDILDQERADLEKAWVQRRMMLDQCLELQLF 124 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988766
No 43
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.67 E-value=1e-18 Score=166.01 Aligned_cols=212 Identities=15% Similarity=0.240 Sum_probs=161.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-HhhHHHHHHHHHh------hHhcCCCCchH
Q psy10628 25 SGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQ-LSRIDDLEKFAKD------LLAEHHYDSSG 97 (238)
Q Consensus 25 ~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~-~~~v~~l~~~~~~------L~~~~~~~~~~ 97 (238)
.|......+..|+......+....++.++..++..++.|..|+...... ......|...... +....++.++
T Consensus 762 eYe~~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekpp~~~ek~rLeal~~~iqtkLrl~~~~~y~p~- 840 (995)
T 2ycu_A 762 DYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAP- 840 (995)
T ss_dssp HHHHHHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHHHHHHHHHHHCSSSCCCCCSSCSSTHHHHHHH-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhcCCCCCcc-
Confidence 3344455789999999988887778888999999999999998887642 2223333222211 1111122222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHH
Q psy10628 98 IQQRLQAVIARKDRLKETSTARRKRLIESRQ--------MQQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKH 168 (238)
Q Consensus 98 i~~~l~~L~~rw~~L~~~~~~r~~~L~~~~~--------l~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh 168 (238)
.......|+.+|..|.....+|...|...+. +++|..+++..++||.+++..+.++++ .|+..|++++++|
T Consensus 841 ~gl~~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s~d~g~dl~~vqallkKh 920 (995)
T 2ycu_A 841 AGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNL 920 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 2456899999999999999999999876552 257999999999999999999877665 5899999999999
Q ss_pred HHHHHHHHhhhhhHH-hHHHHHHHhhcCCCCChHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccC
Q psy10628 169 AAFESELAANKSRVG-AVTAEGESLISGGHFAAAEIKTRLDEL-ELEWRQLQESSALKRERLSDAYQTQRH 237 (238)
Q Consensus 169 ~~~~~ei~~~~~~v~-~l~~~g~~L~~~~~~~~~~i~~~~~~l-~~~W~~L~~~~~~r~~~L~~a~~~~q~ 237 (238)
++|+++|.+++.++. .|...|+.|.+.++++++.|..+.+.| ..+|..|.+++..|+..|+++++++|.
T Consensus 921 ea~e~dl~a~e~ri~~~l~~~a~~L~~~~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~~~q~ 991 (995)
T 2ycu_A 921 EAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQK 991 (995)
T ss_dssp HHHHHHHHHTTTCSCSSHHHHHHHHTTTHHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997 999999999999999999999999999 699999999999999999999999885
No 44
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.65 E-value=3.2e-16 Score=125.95 Aligned_cols=120 Identities=18% Similarity=0.161 Sum_probs=86.6
Q ss_pred hHHHHHHHHH-------chH-HHHhHhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhH
Q psy10628 6 GLSSLKEAFL-------NND-DIGESLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRI 77 (238)
Q Consensus 6 ~~~~l~~~w~-------~r~-~l~~~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v 77 (238)
.+..|...|. .|. .|+.+..|..++.++..||.+++..+.+.++|.++..|+.++++|+.|+.+|.++.++|
T Consensus 97 ~~~~l~~~~~~L~~~~~~R~~~Le~l~~F~~~~~~~~~Wi~eke~~~~s~d~g~~l~~v~~L~~kh~~l~~el~~~~~~v 176 (224)
T 2iak_A 97 KLHRLESQYAKLLNTSRNQERHLDTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESI 176 (224)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------------CSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHhhHHH
Confidence 3445555555 343 47777778888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 78 DDLEKFAKDLLAEHHYDSSGIQQRLQAVIARKDRLKETSTARRKRLIE 125 (238)
Q Consensus 78 ~~l~~~~~~L~~~~~~~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~ 125 (238)
+.|...|+.|+..+|++++.|+.+++.|+.+|+.|...+..|+..|++
T Consensus 177 ~~v~~~g~~L~~~~h~~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~~ 224 (224)
T 2iak_A 177 KAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224 (224)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999998863
No 45
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.62 E-value=6e-15 Score=117.30 Aligned_cols=108 Identities=18% Similarity=0.123 Sum_probs=100.0
Q ss_pred HHHHhHhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchH
Q psy10628 18 DDIGESLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSG 97 (238)
Q Consensus 18 ~~l~~~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~ 97 (238)
..|+.+..|......+..||.+++..+.+.++|.++..++.++++|+.|+.++.++..+|..|+..|+.|+..+||+++.
T Consensus 102 ~~L~~L~~f~~~~~~~~~Wl~eke~~~~s~d~g~~~~~v~~l~~k~~~f~~el~~~~~~v~~l~~~~~~Ll~~~h~~~~~ 181 (210)
T 3pdy_A 102 RSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPT 181 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCChHH
Confidence 34776667777777999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 98 IQQRLQAVIARKDRLKETSTARRKRLIE 125 (238)
Q Consensus 98 i~~~l~~L~~rw~~L~~~~~~r~~~L~~ 125 (238)
|+.+++.|+.+|+.|..++..|..+|.+
T Consensus 182 I~~~~~~l~~~W~~L~~L~~~~e~hLk~ 209 (210)
T 3pdy_A 182 VESFQAALQTQWSWMLQLCCCIEAHLKE 209 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999988764
No 46
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.31 E-value=3.3e-13 Score=128.47 Aligned_cols=133 Identities=16% Similarity=0.210 Sum_probs=113.4
Q ss_pred chhhHHHHHHHHHchHH-HHhH-----------hhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy10628 3 GDDGLSSLKEAFLNNDD-IGES-----------LSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKAL 70 (238)
Q Consensus 3 ~~~~~~~l~~~w~~r~~-l~~~-----------l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i 70 (238)
++..|..|....+.|.+ |... -.|.......++||++++..+.+.++|.|+..|++++++|++|+.+|
T Consensus 856 L~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~d~g~dL~~Vqal~KKhea~e~dl 935 (1010)
T 1g8x_A 856 IDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGEC 935 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSCCSCCSTTTTGGGTTSHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHH
Confidence 34556666666555543 3332 23444677999999999999999999999999999999999999999
Q ss_pred HHhHhhHH-HHHHHHHhhHhcCCCCchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 71 EAQLSRID-DLEKFAKDLLAEHHYDSSGIQQRLQAVI-ARKDRLKETSTARRKRLIESRQMQQFLRN 135 (238)
Q Consensus 71 ~~~~~~v~-~l~~~~~~L~~~~~~~~~~i~~~l~~L~-~rw~~L~~~~~~r~~~L~~~~~l~~f~~~ 135 (238)
.+++.+|. .|...|+.|++.++++++.|..+.+.|. .+|+.|..++..|+..|+++++++++..+
T Consensus 936 ~a~e~ri~~~l~~~a~eL~~~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq~~~~~~~ 1002 (1010)
T 1g8x_A 936 QSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIED 1002 (1010)
T ss_dssp THHHHTHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTSTTTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999996 89999999999999999999987765443
No 47
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=99.20 E-value=1.4e-09 Score=78.23 Aligned_cols=102 Identities=13% Similarity=0.218 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhCCCC-CChhhHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhc-----------CCC
Q psy10628 130 QQFLRNMYEVGGWILQKQQICADESY-RDPTNLQSKIQKHAAFESELAANKSRVGAVTAEGESLIS-----------GGH 197 (238)
Q Consensus 130 ~~f~~~~~~~~~WL~~~~~~l~~~~~-~d~~~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~-----------~~~ 197 (238)
..|-+.+..|.+|+..++..|.++.. .+.++|+.++.+|.+|++++......++.|...++.|-. .+|
T Consensus 15 leFAKrAa~fNnW~e~A~EdL~D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~~~~~~~~~~~~~np 94 (129)
T 1wlx_A 15 LEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLSGSNP 94 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSSSCS
T ss_pred HHHHHHhHHHHHHHHhHHHHhccchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence 57999999999999999999987765 789999999999999999999999888888665555542 236
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10628 198 FAAAEIKTRLDELELEWRQLQESSALKRERLSDAYQTQ 235 (238)
Q Consensus 198 ~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~a~~~~ 235 (238)
|..-. .+.|...|..|..++..|...|.+.+...
T Consensus 95 YT~it----~~~l~~~W~~l~~li~~Rd~~Lq~E~~RQ 128 (129)
T 1wlx_A 95 YTTVT----PQIINSKWEKVQQLVPKRDHALLEEQSKQ 128 (129)
T ss_dssp SCCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred Cccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 65544 78899999999999999999999877654
No 48
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.13 E-value=3.2e-12 Score=121.74 Aligned_cols=104 Identities=16% Similarity=0.239 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHH-HHHHHHHhhHhcCCCCchHHHHHHHHH-H
Q psy10628 29 ALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRID-DLEKFAKDLLAEHHYDSSGIQQRLQAV-I 106 (238)
Q Consensus 29 ~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~-~l~~~~~~L~~~~~~~~~~i~~~l~~L-~ 106 (238)
.....++||.+++..+.+.++|.|+..|++++++|++|+.+|.+++.++. .+...|+.|.+.+|++++.|..+...| .
T Consensus 886 ka~~~e~Wl~eke~~l~s~d~g~dl~~vqallkKhea~e~dl~a~e~ri~~~l~~~a~~L~~~~y~~~~~I~~R~~~l~~ 965 (995)
T 2ycu_A 886 ILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFA 965 (995)
T ss_dssp CCCCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCSSHHHHHHHHTTTHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999997 999999999999999999999999999 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 107 ARKDRLKETSTARRKRLIESRQMQQF 132 (238)
Q Consensus 107 ~rw~~L~~~~~~r~~~L~~~~~l~~f 132 (238)
.+|+.|...+..|+.+|++++++++-
T Consensus 966 ~~W~~L~~~a~~Rr~~L~~~~~~~q~ 991 (995)
T 2ycu_A 966 QQWTGVKSSAETYKNTLLAELERLQK 991 (995)
T ss_dssp HHHHHHHSSSCCCC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999877753
No 49
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=98.83 E-value=1.7e-07 Score=67.28 Aligned_cols=104 Identities=15% Similarity=0.191 Sum_probs=86.6
Q ss_pred HHHh-HhhhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhc-------
Q psy10628 19 DIGE-SLSGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAE------- 90 (238)
Q Consensus 19 ~l~~-~l~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~------- 90 (238)
++++ ++.|......+.+|+.+++..|..+-.+.+++.|+.++..|+.|+.++..+...++.|...+..|-..
T Consensus 9 ~id~L~leFAKrAa~fNnW~e~A~EdL~D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~~~~~~~~~ 88 (129)
T 1wlx_A 9 AIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIK 88 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHhHHHHHHHHhHHHHhccchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 3555 66777788899999999999999777789999999999999999999999999999997776666541
Q ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 91 ----HHYDSSGIQQRLQAVIARKDRLKETSTARRKRLIES 126 (238)
Q Consensus 91 ----~~~~~~~i~~~l~~L~~rw~~L~~~~~~r~~~L~~~ 126 (238)
+||..-+ ...|...|+.|...+..|...|..-
T Consensus 89 ~~~~npYT~it----~~~l~~~W~~l~~li~~Rd~~Lq~E 124 (129)
T 1wlx_A 89 LSGSNPYTTVT----PQIINSKWEKVQQLVPKRDHALLEE 124 (129)
T ss_dssp CSSSCSSCCCC----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccch----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1333322 6899999999999999999998753
No 50
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=98.69 E-value=2.4e-08 Score=80.06 Aligned_cols=94 Identities=16% Similarity=0.134 Sum_probs=80.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHHHHHHH
Q psy10628 25 SGVEALLRKHKAFENKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQQRLQA 104 (238)
Q Consensus 25 ~~~~~l~~l~~WL~~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~ 104 (238)
.|.......+.||..++..+. .++ .++. +.+.+++|++|+.+|.++..+|..+...++.|...+|++++.|..++..
T Consensus 132 kf~rka~~~e~~L~~~~~~L~-~d~-~~l~-~~~a~k~~e~ie~dL~~~e~~i~~l~~~a~~L~~~~y~~a~~i~~r~~~ 208 (235)
T 2odv_A 132 KLQMEAGLAEEQLNQADALLQ-SDV-RLLA-AGKVPQRAGEVERDLDKADSMIRLLFNDVQTLKDGRHPQGEQMYRRVYR 208 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHH-HHTT-TTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-Hhh-hhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 344567799999999999993 332 2222 4555888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy10628 105 VIARKDRLKETSTARRK 121 (238)
Q Consensus 105 L~~rw~~L~~~~~~r~~ 121 (238)
|+.+|..|...+..|..
T Consensus 209 l~~~w~~L~~~~~~r~~ 225 (235)
T 2odv_A 209 LHKRLVAIRTEYNLRLK 225 (235)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988765
No 51
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=71.47 E-value=31 Score=26.14 Aligned_cols=30 Identities=7% Similarity=0.172 Sum_probs=23.4
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHhHHH
Q psy10628 158 PTNLQSKIQKHAAFESELAANKSRVGAVTA 187 (238)
Q Consensus 158 ~~~i~~~l~kh~~~~~ei~~~~~~v~~l~~ 187 (238)
-..|..+++++.........++...+...+
T Consensus 157 e~dv~~Fl~~y~~~R~~yH~RreK~~rw~e 186 (192)
T 2p22_C 157 ADDLDQFIKNYLDIRTQYHLRREKLATWDK 186 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 578899999999988888777777665543
No 52
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=71.35 E-value=18 Score=23.53 Aligned_cols=52 Identities=19% Similarity=0.234 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhhhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHH
Q psy10628 30 LLRKHKAFENKEAFLNNDDI-GESLSGVEALLRKHKAFEKALEAQLSRIDDLE 81 (238)
Q Consensus 30 l~~l~~WL~~~e~~l~~~~~-~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~ 81 (238)
+..++.=+...+..|+.+++ ..|...+..+..++..++.++.....+-..|.
T Consensus 31 Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erWeeLe 83 (89)
T 2lw1_A 31 LEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERWEYLE 83 (89)
T ss_dssp HHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34778888888888888875 67888898888888888888877666555443
No 53
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=61.53 E-value=16 Score=24.28 Aligned_cols=24 Identities=13% Similarity=0.362 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhC
Q psy10628 129 MQQFLRNMYEVGGWILQKQQICAD 152 (238)
Q Consensus 129 l~~f~~~~~~~~~WL~~~~~~l~~ 152 (238)
+..|...+.+-..||.++..+++.
T Consensus 61 l~~f~e~a~e~vp~L~~~i~vle~ 84 (94)
T 3fx7_A 61 FNEFDEAAQEQIAWLKERIRVLEE 84 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHhHHHHHHHHHhHH
Confidence 457888888889999998887753
No 54
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=48.37 E-value=81 Score=23.39 Aligned_cols=53 Identities=13% Similarity=0.065 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhHhhHHHHHHHHHhhHhcCCCCchHHHHHHHHHHHHHHHHHH
Q psy10628 62 KHKAFEKALEAQLSRIDDLEKFAKDLLAEHHYDSSGIQQRLQAVIARKDRLKE 114 (238)
Q Consensus 62 ~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~L~~rw~~L~~ 114 (238)
-++.+..++.+....+......-+.|+....+|...|+....++...-..+..
T Consensus 79 I~~e~r~~~~~Lr~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~qL~~ 131 (175)
T 3lay_A 79 IYDDYYTQTSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKLDE 131 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666666666667778878889999998888887766655544
No 55
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=40.42 E-value=72 Score=20.55 Aligned_cols=52 Identities=23% Similarity=0.187 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhHHHHHHHHhhCCC-C-CChhhHHHHHHHHHHHHHHHHhhhhhH
Q psy10628 131 QFLRNMYEVGGWILQKQQICADES-Y-RDPTNLQSKIQKHAAFESELAANKSRV 182 (238)
Q Consensus 131 ~f~~~~~~~~~WL~~~~~~l~~~~-~-~d~~~i~~~l~kh~~~~~ei~~~~~~v 182 (238)
..-..+..+..=|...+..++++. + .|+..+..+..++..++.++.....+-
T Consensus 26 ~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erW 79 (89)
T 2lw1_A 26 QLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERW 79 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566677777777777777665 3 577777777777776666665544443
No 56
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=32.05 E-value=41 Score=19.05 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 203 IKTRLDELELEWRQLQESSALKRERLS 229 (238)
Q Consensus 203 i~~~~~~l~~~W~~L~~~~~~r~~~L~ 229 (238)
++.++..|-..|.+-...+..|-..|+
T Consensus 17 LqTr~ArLlae~~ssq~KlKqRit~lE 43 (46)
T 3swy_A 17 LQTRFARLLAEYNATQMKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444444444444443
No 57
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=30.93 E-value=1.2e+02 Score=20.45 Aligned_cols=70 Identities=10% Similarity=0.132 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 160 NLQSKIQKHAAFESELAANKSRVGAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERLSD 230 (238)
Q Consensus 160 ~i~~~l~kh~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L~~ 230 (238)
....++.+...+..+|......|+.|...-..++....+ .+.++..++.+...-..+...+..+-..|+.
T Consensus 6 ~m~~F~~~v~~I~~~i~~i~~~v~~l~~~~~~~L~~~~~-~~~~~~~l~~l~~~i~~~a~~ik~~Lk~l~~ 75 (127)
T 1ez3_A 6 FMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNP-DEKTKEELEELMSDIKKTANKVRSKLKSIEQ 75 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666777777777777777776666666553222 2345666666555555555555555554443
No 58
>1ybk_A Tetrabrachion; right hand coiled coil, protein binding; HET: BEQ; 1.45A {Staphylothermus marinus} PDB: 1fe6_A
Probab=29.18 E-value=76 Score=17.45 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 209 ELELEWRQLQESSALKRERLSDA 231 (238)
Q Consensus 209 ~l~~~W~~L~~~~~~r~~~L~~a 231 (238)
-+..+|++|.++..-|..+|+.-
T Consensus 18 iiddryeslknlitlradrlemi 40 (52)
T 1ybk_A 18 IIDDRYESLKNLITLRADRLEMI 40 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccHHHHHHHHHhhhhhhhhhh
Confidence 35679999999999999998854
No 59
>1zw0_A Type III secretion protein; chaperone, translocation, export; 1.80A {Yersinia pestis} PDB: 2p58_A
Probab=27.33 E-value=1.1e+02 Score=18.66 Aligned_cols=24 Identities=25% Similarity=0.271 Sum_probs=20.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q psy10628 48 DIGESLSGVEALLRKHKAFEKALE 71 (238)
Q Consensus 48 ~~~~~l~~ve~~l~~h~~l~~~i~ 71 (238)
+.|+++..-+..+++|++++.-+.
T Consensus 33 ~~G~~pqqYQ~~q~q~~A~eaal~ 56 (66)
T 1zw0_A 33 MRGGDAKQYQVWQRESKALESAIA 56 (66)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHH
Confidence 458999999999999999888776
No 60
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=25.46 E-value=2e+02 Score=20.96 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHhhhhhHHhHHHH
Q psy10628 163 SKIQKHAAFESELAANKSRVGAVTAE 188 (238)
Q Consensus 163 ~~l~kh~~~~~ei~~~~~~v~~l~~~ 188 (238)
.++.+...+..+|......+..|...
T Consensus 40 ~F~~~v~~I~~~i~~i~~~v~~l~~~ 65 (180)
T 1s94_A 40 EFFEQVEEIRAMIDKISDNVDAVKKK 65 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444333
No 61
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=24.66 E-value=1.6e+02 Score=19.52 Aligned_cols=59 Identities=14% Similarity=0.239 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHhcC-CCCchHHHHHHHHHHHHHHHHH
Q psy10628 55 GVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLAEH-HYDSSGIQQRLQAVIARKDRLK 113 (238)
Q Consensus 55 ~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~~~-~~~~~~i~~~l~~L~~rw~~L~ 113 (238)
..+.+.++-..++.+|..-...-+.|..+-.-..... ..|+..+...+.+....++.|.
T Consensus 16 RkkkL~~Ki~el~~ei~ke~~~regl~Km~~vY~~nP~~GD~~s~~~~L~e~~~kid~L~ 75 (98)
T 2ke4_A 16 QRKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIERLK 75 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGGCCGGGSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 3566778888889999887777778877776666543 3478888888888776666654
No 62
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=22.31 E-value=2.4e+02 Score=20.80 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=41.1
Q ss_pred HHHHHHHHHhhhhhHHhHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10628 168 HAAFESELAANKSRVGAVTAEGESLISGGHFAAAEIKTRLDELELEWRQLQESSALKRERL 228 (238)
Q Consensus 168 h~~~~~ei~~~~~~v~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~r~~~L 228 (238)
++++..++...+..+......-+.|+....++...|+...+++...-..+...-.+....+
T Consensus 80 ~~e~r~~~~~Lr~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~qL~~~R~k~~~em 140 (175)
T 3lay_A 80 YDDYYTQTSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKLDEQRVKRDVAM 140 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666666777778877778888888877777776666655544444444
No 63
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=21.18 E-value=48 Score=16.31 Aligned_cols=17 Identities=18% Similarity=0.542 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy10628 207 LDELELEWRQLQESSAL 223 (238)
Q Consensus 207 ~~~l~~~W~~L~~~~~~ 223 (238)
.+.+.+.|.+|.+.+.+
T Consensus 3 ~e~mr~Q~~~lveKvq~ 19 (26)
T 1oeg_A 3 VEDMQRQWAGLVEKVQA 19 (26)
T ss_dssp HHHTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45667788888777654
No 64
>1rq0_A RF-1, peptide chain release factor 1; X-RAY, crystal, peptide release factor 1, ribosome, structural genomics, BSGC structure funded by NIH; 2.65A {Thermotoga maritima} SCOP: e.38.1.1 PDB: 2fvo_A
Probab=20.17 E-value=3.7e+02 Score=22.19 Aligned_cols=47 Identities=13% Similarity=0.022 Sum_probs=34.0
Q ss_pred HHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHhhHh
Q psy10628 39 NKEAFLNNDDIGESLSGVEALLRKHKAFEKALEAQLSRIDDLEKFAKDLLA 89 (238)
Q Consensus 39 ~~e~~l~~~~~~~~l~~ve~~l~~h~~l~~~i~~~~~~v~~l~~~~~~L~~ 89 (238)
+.+..++.+++ |.+....+.+++..++..+.....-. -...+..|+.
T Consensus 7 el~~~~~~p~~--d~~~~~~~~ke~~~l~~~v~~~~~~~--~~~~~~~l~~ 53 (342)
T 1rq0_A 7 EIEKLLARPDL--TPEQMKNYGMEYAKIEEIENITNRIK--ETQEFIELLR 53 (342)
T ss_dssp HHHHHHHSSCC--CHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHTTTT
T ss_pred HHHHHhhCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHH
Confidence 45566777777 89999999999999999988765433 3444555654
Done!