RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10631
(424 letters)
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 162 bits (413), Expect = 7e-48
Identities = 40/218 (18%), Positives = 87/218 (39%), Gaps = 20/218 (9%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
++TG + G+G A G L R+ KL + G A D++
Sbjct: 5 VITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGY----RARDLAS-H 59
Query: 143 AALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDL--WN-LINLNIATTTMLTKL 199
++++ +L+ +V++ G+ Y + E+D LI N+++ + +
Sbjct: 60 QEVEQLFEQLDSI-PSTVVHSAGS-----GYFGLLQEQDPEQIQTLIENNLSSAINVLRE 113
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
++ + K++ +V + S++ QP + Y A K ++ E++R+E + + + +
Sbjct: 114 LVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVY 172
Query: 260 PAFVSTKMNNFSYRVRN--KSFFVPDAEQYARSAVSTL 295
P ++T F + AE A L
Sbjct: 173 PGGMAT---EFWETSGKSLDTSSFMSAEDAALMIHGAL 207
Score = 54.9 bits (133), Expect = 8e-09
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG + G+G A G L R+ KL +
Sbjct: 6 ITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS 46
Score = 37.9 bits (89), Expect = 0.003
Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 9/64 (14%)
Query: 346 YVKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDF----NPSGQKSKLLSATPEQFARSA 401
VK E +R+E + + + PG ++ T+F S S + + E A
Sbjct: 149 AVKGLIESVRLELKGKPMKIIAVYPGGMA---TEFWETSGKSLDTSSFM--SAEDAALMI 203
Query: 402 VKTL 405
L
Sbjct: 204 HGAL 207
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 145 bits (369), Expect = 4e-41
Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 7/188 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS---E 140
VTG + GIG ELA G ++ SR ++L + + G + + D+S E
Sbjct: 14 VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDLSSRSE 72
Query: 141 GKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
+ ++ + G + ILVNN G + D ++++N L+ L
Sbjct: 73 RQELMNTVANHFHGK-LNILVNNAGIVIYKEA--KDYTVEDYSLIMSINFEAAYHLSVLA 129
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
P +K RG +V +SS S P VY A+K + + L E+ K I V + P
Sbjct: 130 HPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP 189
Query: 261 AFVSTKMN 268
++T +
Sbjct: 190 GVIATSLV 197
Score = 53.3 bits (129), Expect = 3e-08
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG ELA G ++ SR ++L +
Sbjct: 14 VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQW 53
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 144 bits (366), Expect = 1e-40
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 3/185 (1%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG + GIG A A A+ G +IVL++R +++L + A+ ++ GV+ +A D++ +
Sbjct: 12 ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEG 71
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
+++ ILVNN G + E + L + L + ++P
Sbjct: 72 VDAVVESVRSSFGGADILVNNAGT--GSNETIMEAADEKWQFYWELLVMAAVRLARGLVP 129
Query: 203 QMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
M+ RG GAI++ +S QP +Y +K + FS+ L E K I V I P
Sbjct: 130 GMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGL 189
Query: 263 VSTKM 267
+ T
Sbjct: 190 ILTPD 194
Score = 51.4 bits (124), Expect = 2e-07
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG + GIG A A A+ G +IVL++R +++L + A+ +
Sbjct: 12 ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL 51
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 144 bits (365), Expect = 2e-40
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS---E 140
VTG + GIG A ELA G + SR ++L + + G+ + D+ E
Sbjct: 26 VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDLLSRTE 84
Query: 141 GKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
+ + +G + ILVNN G + E+D ++ N L+++
Sbjct: 85 RDKLMQTVAHVFDGK-LNILVNNAGVVIHKEA--KDFTEKDYNIIMGTNFEAAYHLSQIA 141
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
P +K G ++ +SS + P ++Y+ASK I +++L E+ K I V +AP
Sbjct: 142 YPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 201
Query: 261 AFVSTKMN 268
+ T +
Sbjct: 202 GVILTPLV 209
Score = 52.1 bits (126), Expect = 8e-08
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG A ELA G + SR ++L + +
Sbjct: 26 VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIW 65
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 144 bits (365), Expect = 3e-40
Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 11/214 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + GIG+ A+ LA+ G ++V+ +R+ E L+K IA M +
Sbjct: 33 VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTF 92
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
A + + + +L+ N N + L + + +N + +LT LP
Sbjct: 93 AEQFVAQAGKLMGGLDMLILNHITNTSLN--LFHDDIHHVRKSMEVNFLSYVVLTVAALP 150
Query: 203 QMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEY--QKYGITVQHIAP 260
M ++ G+IV VSS + +P+ Y+ASK + F ++R EY + +++
Sbjct: 151 -MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVL 209
Query: 261 AFVSTKMNNFSYRVRNKSFFVP--DAEQYARSAV 292
+ T + + + + E+ A +
Sbjct: 210 GLIDT---ETAMKAVSGIVHMQAAPKEECALEII 240
Score = 54.6 bits (132), Expect = 1e-08
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG+ A+ LA+ G ++V+ +R+ E L+K
Sbjct: 33 VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC 72
Score = 33.4 bits (77), Expect = 0.12
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 350 FTEGLRIEYENSGL--TFQLLSPGLVSSKMTDFNPSGQKSKLLSATPEQFARSAVK 403
F +R EY S + + L GL+ ++ SG +A E+ A +K
Sbjct: 187 FFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHM-QAAPKEECALEIIK 241
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 141 bits (358), Expect = 8e-40
Identities = 47/238 (19%), Positives = 96/238 (40%), Gaps = 26/238 (10%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
VTG G+G+A L RG + ++ R ++L++ + G I AD++
Sbjct: 8 VTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL----GNAVIGIVADLAHHED 63
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
A G ++++ G + + ++ N+ +T ++ +
Sbjct: 64 VDVAFAAAVEWG-GL-PELVLHCAG--TGEFGPVGVYTAEQIRRVMESNLVSTILVAQQT 119
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
+ + ERG G + NV SS+ ++Y ASK +R F E+LR E + + + ++ P
Sbjct: 120 VRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYP 178
Query: 261 AFVSTKMNNFSYRVRNKSFFVPD---------AEQYARSAVS--TLGVTDTSTGFWVH 307
+ + ++ + + V F P+ E + V+ +G + G H
Sbjct: 179 SGIRSEFWDNTDHVDPSGFMTPEDAAAYMLDALEARSSCHVTDLFIGRNE---GHHHH 233
Score = 52.2 bits (126), Expect = 5e-08
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG G+G+A L RG + ++ R ++L++ +G
Sbjct: 8 VTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG 48
Score = 39.1 bits (92), Expect = 0.001
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATPEQFARSAVKTL 405
++ F E LR E ++S L L P + S+ D S + TPE A + L
Sbjct: 155 MRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGFM--TPEDAAAYMLDAL 211
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 141 bits (357), Expect = 2e-39
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 3/185 (1%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI-ETTHGVQTKIIAADMSEGK 142
VT + G+G A A ELAR G ++L SR EKL+ A I G Q I+A D+ E
Sbjct: 12 VTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPG 71
Query: 143 AALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
+ + ILV + G P E+ D L + + +
Sbjct: 72 DIDRLFEKARDLGGADILVYSTGG--PRPGRFMELGVEDWDESYRLLARSAVWVGRRAAE 129
Query: 203 QMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
QM E+G G +V + S + +PW + ++ + L +E +G+TV + P+
Sbjct: 130 QMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSL 189
Query: 263 VSTKM 267
+ T
Sbjct: 190 ILTDR 194
Score = 51.8 bits (125), Expect = 9e-08
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VT + G+G A A ELAR G ++L SR EKL+ A I
Sbjct: 12 VTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRI 51
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 140 bits (355), Expect = 3e-39
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETT--HGVQTKIIAADMSE 140
++TG + GIG A LA G +VLI+R+ + L+K EI + H + ++ D+++
Sbjct: 11 IITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD 70
Query: 141 GKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
A +IK + + + ILVN L E + + ++ +N+ + K
Sbjct: 71 CTKADTEIKDIHQKYGAVDILVNAAA--MFMDGSLSEPVDN--FRKIMEINVIAQYGILK 126
Query: 199 LVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
V MK + G I NV+S + + +Y ++K + +E+L E GI V +
Sbjct: 127 TVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTL 186
Query: 259 APAFVSTKM 267
P +V+T M
Sbjct: 187 CPGWVNTDM 195
Score = 51.8 bits (125), Expect = 9e-08
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG + GIG A LA G +VLI+R+ + L+K EI
Sbjct: 12 ITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEI 51
Score = 34.5 bits (80), Expect = 0.039
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATPEQFARSAV 402
+ E L E G+ L PG V++ M + K + + P+ +
Sbjct: 165 LLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFKDEEM-IQPDDLLNTIR 219
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 140 bits (354), Expect = 4e-39
Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 10/188 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
V G D IG A + A G + R EKL EIE G + + D
Sbjct: 12 VIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDE 70
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
A L+ + + + NVGAN +P + E +R + + + +
Sbjct: 71 VTAFLNAADAH--AP-LEVTIFNVGANVNFP--ILETTDRVFRKVWEMACWAGFVSGRES 125
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQH-IA 259
M G+G I +++ + F +A++K +R ++++ E I V H I
Sbjct: 126 ARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLII 185
Query: 260 PAFVSTKM 267
+ V T
Sbjct: 186 DSGVDTAW 193
Score = 49.6 bits (119), Expect = 6e-07
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
V G D IG A + A G + R EKL EI
Sbjct: 12 VIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEI 51
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 139 bits (354), Expect = 6e-39
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 8/190 (4%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+VTG + G+G A LA G ++V+ SR LE+ + A+++ +GV+T D+S +
Sbjct: 25 LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE 84
Query: 143 AALDKI-KTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
+ + + + +VN G N +P +E P + + +I +N+ T + +
Sbjct: 85 EVKKLLEAVKEKFGKLDTVVNAAGINRRHPA--EEFPLDE-FRQVIEVNLFGTYYVCREA 141
Query: 201 LPQMKERGRGAIVNVSS--SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
++E +I+N+ S E P + YAASK + ++AL E+ +YGI V I
Sbjct: 142 FSLLRESDNPSIINIGSLTVEEV-TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVI 200
Query: 259 APAFVSTKMN 268
AP + TKM
Sbjct: 201 APGWYRTKMT 210
Score = 52.1 bits (126), Expect = 8e-08
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + G+G A LA G ++V+ SR LE+ + A+++
Sbjct: 26 VTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL 65
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 138 bits (349), Expect = 8e-39
Identities = 43/213 (20%), Positives = 85/213 (39%), Gaps = 20/213 (9%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
++TG T G+G A+A L G +++L R L + A+E+ G + + AD+++ +
Sbjct: 4 LITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREV----GARA--LPADLAD-E 54
Query: 143 AALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
+ E + +LV+ VG + E + ++ ++ + VL
Sbjct: 55 LEAKALLEEAGP--LDLLVHAVG--KAGRASVREAGRDLVEEMLAAHL----LTAAFVLK 106
Query: 203 QMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
+ + V + P F YAA+K + + EA R E + G+ + +
Sbjct: 107 HARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPA 166
Query: 263 VSTKMNNFSYRVRNKSFFVPDAEQYARSAVSTL 295
V+T + + E+ AR + L
Sbjct: 167 VATGLWA---PLGGPPKGALSPEEAARKVLEGL 196
Score = 45.2 bits (108), Expect = 9e-06
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATPEQFARSAVKTL 405
++ + E R E G+ L+ V++ + K L +PE+ AR ++ L
Sbjct: 141 LEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGGPPKGAL---SPEEAARKVLEGL 196
Score = 42.5 bits (101), Expect = 9e-05
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG T G+G A+A L G +++L R L + A+E+G
Sbjct: 5 ITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVG 43
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 138 bits (351), Expect = 2e-38
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+VTG GIG+A AH AR G +++ RT + +K+ A EI G + + AD+++ +
Sbjct: 35 VVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG-GGSAEAVVADLADLE 92
Query: 143 AALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
A + + + +LVNN G P +E+ W ++ +N+ +L++
Sbjct: 93 GAANVAEELAATRRVDVLVNNAGIIARAPA--EEVSLGR-WREVLTVNLDAAWVLSRSFG 149
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
M G G IV ++S Q YAASK + + AL E+ G+ V +AP
Sbjct: 150 TAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPG 209
Query: 262 FVSTKMN 268
+V T
Sbjct: 210 YVVTANT 216
Score = 49.1 bits (118), Expect = 8e-07
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG+A AH AR G +++ RT + +K+ A EI
Sbjct: 36 VTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEI 74
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 138 bits (349), Expect = 3e-38
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 14/196 (7%)
Query: 84 VTGCTDGIGQAYAHELAR---RGINIVLISRTLEKLKKTAKEIETTH-GVQTKIIAADMS 139
+TG + G G+A A +LAR G +++ +R+ L++ +E+ ++ + AAD+
Sbjct: 11 LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG 70
Query: 140 ---EGKAALDKIKT--ELEGHTIGILVNNVG-ANYTYPMYLDEIPERDLWNLINLNIATT 193
+ L ++ EG +L+NN +L+ ++ N LN+ +
Sbjct: 71 TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSM 130
Query: 194 TMLTKLVLPQMKERG--RGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKY 251
LT L ++ +VN+SS QP+ + +Y A K + L E +
Sbjct: 131 LCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EP 188
Query: 252 GITVQHIAPAFVSTKM 267
+ V AP + M
Sbjct: 189 SVRVLSYAPGPLDNDM 204
Score = 49.7 bits (119), Expect = 5e-07
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 1 VTGCTDGIGQAYAHELAR---RGINIVLISRTLEKLKKTAKEIG 41
+TG + G G+A A +LAR G +++ +R+ L++ +E+G
Sbjct: 11 LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELG 54
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 136 bits (346), Expect = 7e-38
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 11/190 (5%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG GIG A G ++LI R L + A+E+ I AD+++
Sbjct: 15 AVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG---AAVAARIVADVTD-A 70
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
A+ E E + ILVN+ G + E + W ++ +N+ ++
Sbjct: 71 EAMTAAAAEAEAVAPVSILVNSAGIARLHDA--LETDDAT-WRQVMAVNVDGMFWASRAF 127
Query: 201 LPQMKERGRGAIVNVSS--SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
M RG GAIVN+ S + + Y ASK + + AL E+ G+ V +
Sbjct: 128 GRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNAL 187
Query: 259 APAFVSTKMN 268
AP +V+T+M
Sbjct: 188 APGYVATEMT 197
Score = 53.7 bits (130), Expect = 3e-08
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG A G ++LI R L + A+E+G
Sbjct: 16 VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG 56
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 136 bits (344), Expect = 2e-37
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 7/189 (3%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+VTG G+G AYA LA G ++L L ++ + G +A D+++
Sbjct: 13 LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK-GYDAHGVAFDVTDEL 71
Query: 143 AALDKI-KTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
A K + EG + IL+NN G Y PM E+ + W +I+ N+ + ++++
Sbjct: 72 AIEAAFSKLDAEGIHVDILINNAGIQYRKPM--VELELEN-WQKVIDTNLTSAFLVSRSA 128
Query: 201 LPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
+M R G I+N+ S + P Y A+K I+ + ++ E+ ++ I I
Sbjct: 129 AKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIG 188
Query: 260 PAFVSTKMN 268
P ++ T MN
Sbjct: 189 PGYILTDMN 197
Score = 54.0 bits (131), Expect = 2e-08
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG G+G AYA LA G ++L L ++ +
Sbjct: 14 VTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL 53
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 135 bits (342), Expect = 2e-37
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
++TG + GIG+A A L +G + L++R ++L+ A E+E + + + +
Sbjct: 9 LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDV--REEGDWA 66
Query: 143 AALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDL--WN-LINLNIATTTMLTKL 199
A+ ++ + LVNN G + + E L W +++ N+ + +
Sbjct: 67 RAVAAMEEAFGE--LSALVNNAGV-----GVMKPVHELTLEEWRLVLDTNLTGAFLGIRH 119
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
+P + RG G IVNV S + P+ Y ASK + + A ++ ++ + V ++
Sbjct: 120 AVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVL 179
Query: 260 PAFVST 265
P V T
Sbjct: 180 PGSVDT 185
Score = 48.7 bits (117), Expect = 1e-06
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
+TG + GIG+A A L +G + L++R ++L+ A E+ P +
Sbjct: 10 ITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE--------GALPLPGDVRE 61
Query: 61 ADAVEGL 67
Sbjct: 62 EGDWARA 68
Score = 31.7 bits (73), Expect = 0.32
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATPEQFARSAV 402
+ ++ + + + PG V + N GQ KL PE A++ +
Sbjct: 157 LLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG-NTPGQAWKL---KPEDVAQAVL 208
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 134 bits (340), Expect = 3e-37
Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 16/189 (8%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG- 141
++TG + GIG+A A LAR G + L +R++++L+K A E+ GV+ D+S+
Sbjct: 6 VITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAE 65
Query: 142 --KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDL--WN-LINLNIATTTML 196
+ K+ + ++V N G Y + E ++ +I +N+
Sbjct: 66 SVEEFSKKVLERFGD--VDVVVANAGL-----GYFKRLEELSEEEFHEMIEVNLLGVWRT 118
Query: 197 TKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQ 256
K L +K G A+V S S + P Y ++K R ++E +
Sbjct: 119 LKAFLDSLKRTGGLALVTTSDVS-ARLIPYGGGYVSTKWAARALVRTFQIE--NPDVRFF 175
Query: 257 HIAPAFVST 265
+ P V T
Sbjct: 176 ELRPGAVDT 184
Score = 50.6 bits (122), Expect = 2e-07
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
+TG + GIG+A A LAR G + L +R++++L+K A E+ + ++
Sbjct: 7 ITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVF---YHHLDVSK 63
Query: 61 ADAVEGL 67
A++VE
Sbjct: 64 AESVEEF 70
Score = 29.4 bits (67), Expect = 1.9
Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 7/58 (12%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTD--FNPSGQKSKLLSATPEQFARSAV 402
+ +IE + L PG V + +K L P++ A +
Sbjct: 158 ARALVRTFQIENPDVRFF--ELRPGAVDTYFGGSKPGKPKEKGYL---KPDEIAEAVR 210
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 134 bits (341), Expect = 4e-37
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VT TDGIG A A LA+ G ++V+ SR E + +T ++ G+ + + +
Sbjct: 19 VTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVCHVGKAED 77
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
+ + H + ILV+N N + +D E ++++N+ T ++TK V+P
Sbjct: 78 RERLVAMAVNLHGGVDILVSNAAVNPFFGNIID-ATEEVWDKILHVNVKATVLMTKAVVP 136
Query: 203 QMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
+M++RG G+++ VSS P+P Y SK + ++ L VE I V +AP
Sbjct: 137 EMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGL 196
Query: 263 VSTKM 267
+ T
Sbjct: 197 IKTNF 201
Score = 50.2 bits (121), Expect = 4e-07
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VT TDGIG A A LA+ G ++V+ SR E + +T +
Sbjct: 19 VTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATL 58
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 134 bits (339), Expect = 8e-37
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG T GIG A A G +VL R + +L + + G +A D++E A
Sbjct: 25 ITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDA 84
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ + E + +LVNN G ++ P + + + ++ I +N+ +L V
Sbjct: 85 PAELARRAAEAFGGLDVLVNNAGISHPQP--VVDTDPQL-FDATIAVNLRAPALLASAVG 141
Query: 202 PQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
M G GAI+ V+S++ P P Y SK + ++ L E +GI + P
Sbjct: 142 KAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCP 201
Query: 261 AFVSTKMN 268
V T+M
Sbjct: 202 TVVLTEMG 209
Score = 47.9 bits (115), Expect = 2e-06
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG T GIG A A G +VL R + +L + +G
Sbjct: 25 ITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALG 65
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 133 bits (338), Expect = 1e-36
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 12/187 (6%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
++TG + GIG+ A EL G I+L +R +++ A EI G D+++
Sbjct: 8 LITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-GGTALAQVLDVTDRH 66
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDL--WNL-INLNIATTTMLTK 198
+ + ++ I +LVNN G M L + + W I++NI
Sbjct: 67 SVAAFAQAAVDTWGRIDVLVNNAGV-----MPLSPLAAVKVDEWERMIDVNIKGVLWGIG 121
Query: 199 LVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
VLP M+ + G I+N+ S P VY A+K +R S+ LR E I V +
Sbjct: 122 AVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCV 179
Query: 259 APAFVST 265
P V +
Sbjct: 180 NPGVVES 186
Score = 49.5 bits (119), Expect = 7e-07
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
+TG + GIG+ A EL G I+L +R +++ A EI + + V +T
Sbjct: 9 ITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTAL----AQVLDVTD 64
Query: 61 ADAVEGL 67
+V
Sbjct: 65 RHSVAAF 71
Score = 28.3 bits (64), Expect = 4.2
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTD--FNPSGQKSKLLSA----TPEQFARS 400
V+ ++GLR E++ + ++PG+V S++ + + P AR+
Sbjct: 160 VRAISDGLRQ--ESTNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARA 217
Query: 401 AV 402
Sbjct: 218 VR 219
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 133 bits (338), Expect = 1e-36
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 17/193 (8%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS---E 140
VTG T GIG A E A G I +R +L + + + G Q D S E
Sbjct: 19 VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ-KKGFQVTGSVCDASLRPE 77
Query: 141 GKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
+ + + + G + IL+NN+GA + P + D I+ N+ + L++L
Sbjct: 78 REKLMQTVSSMF-GGKLDILINNLGAIRSKPT--LDYTAEDFSFHISTNLESAYHLSQLA 134
Query: 201 LPQMKERGRGAIVNVSS-----SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITV 255
P +K G G I+ +SS S+ ++Y+A+K + + L E+ GI
Sbjct: 135 HPLLKASGCGNIIFMSSIAGVVSASVG-----SIYSATKGALNQLARNLACEWASDGIRA 189
Query: 256 QHIAPAFVSTKMN 268
+APA ++T +
Sbjct: 190 NAVAPAVIATPLA 202
Score = 49.4 bits (119), Expect = 7e-07
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG T GIG A E A G I +R +L + +
Sbjct: 19 VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKW 58
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 133 bits (336), Expect = 2e-36
Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 11/189 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + GIG A A +L G +VL +R +EKL+ +EI G + + A D+S A
Sbjct: 34 VTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA-AGGEAESHACDLSHSDA 92
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPER---DLWN-LINLNIATTTMLTK 198
L H +LVNN G + W+ LI +N+ +L +
Sbjct: 93 IAAFATGVLAAHGRCDVLVNNAGV-----GWFGGPLHTMKPAEWDALIAVNLKAPYLLLR 147
Query: 199 LVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
P M RG I+N+SS + P Y ASK + + E +++ + V +
Sbjct: 148 AFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLV 207
Query: 259 APAFVSTKM 267
AP V T+
Sbjct: 208 APGSVRTEF 216
Score = 47.6 bits (114), Expect = 3e-06
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG A A +L G +VL +R +EKL+ +EI
Sbjct: 34 VTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREI 73
Score = 33.3 bits (77), Expect = 0.096
Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 350 FTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATPEQFARSAV 402
E + L++PG V ++ S +KS L + P+ A
Sbjct: 189 LMTSAAEELRQHQVRVSLVAPGSVRTEFGV-GLSAKKSALGAIEPDDIADVVA 240
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 132 bits (334), Expect = 3e-36
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 13/193 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGIN-------IVLISRTLEKLKKTAKEIETTHGVQTKIIAA 136
+TG GIG+A A E AR + +VL SRT L+K + E G T I A
Sbjct: 7 ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTITA 65
Query: 137 DMSEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTT 194
D+S+ +E + I LVNN G L ++ E D ++ +N N+ T
Sbjct: 66 DISDMADVRRLTTHIVERYGHIDCLVNNAG--VGRFGALSDLTEED-FDYTMNTNLKGTF 122
Query: 195 MLTKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGIT 254
LT+ + M+ + G I ++S + + + ++Y SK R E +R+ +K +
Sbjct: 123 FLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR 182
Query: 255 VQHIAPAFVSTKM 267
+ + P V T M
Sbjct: 183 ITDVQPGAVYTPM 195
Score = 43.3 bits (103), Expect = 6e-05
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Query: 1 VTGCTDGIGQAYAHELARRGIN-------IVLISRTLEKLKKTAKEI 40
+TG GIG+A A E AR + +VL SRT L+K + E
Sbjct: 7 ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLEC 53
Score = 39.5 bits (93), Expect = 0.001
Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATPEQFARSAV 402
+ E +R+ + + PG V + M ++ ++ PE A V
Sbjct: 165 QRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMM--MPEDIAAPVV 218
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 133 bits (336), Expect = 4e-36
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 14/192 (7%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+VTG + GIG A A A+ G IV E + + + G+ D+++
Sbjct: 38 LVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA-GINAHGYVCDVTDED 96
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
+ I ILVNN G PM E+ + +I++++ +++K V
Sbjct: 97 GIQAMVAQIESEVGIIDILVNNAGIIRRVPM--IEMTAAQ-FRQVIDIDLNAPFIVSKAV 153
Query: 201 LPQMKERGRGAIVNVSS--SSEGQPWPLFTV--YAASKIYIRYFSEALRVEYQKYGITVQ 256
+P M ++G G I+N+ S S G+ TV YAA+K ++ ++ + EY + I
Sbjct: 154 IPSMIKKGHGKIINICSMMSELGRE----TVSAYAAAKGGLKMLTKNIASEYGEANIQCN 209
Query: 257 HIAPAFVSTKMN 268
I P +++T
Sbjct: 210 GIGPGYIATPQT 221
Score = 53.0 bits (128), Expect = 6e-08
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG A A A+ G IV E + +
Sbjct: 39 VTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAY 78
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 131 bits (333), Expect = 5e-36
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+VTG T G G+ ++G ++ R E+L++ E+ G I D+
Sbjct: 4 LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRA 59
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDL--WN-LINLNIATTTMLTK 198
A + + + I ILVNN G + ++ + + W +I+ N +T+
Sbjct: 60 AIEEMLASLPAEWCNIDILVNNAG----LALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115
Query: 199 LVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
VLP M ER G I+N+ S++ P+ VY A+K ++R FS LR + + V I
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175
Query: 259 APAFVSTKMNNFSYRVRNK 277
P V FS VR K
Sbjct: 176 EPGLVGG--TEFSN-VRFK 191
Score = 51.4 bits (124), Expect = 1e-07
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
VTG T G G+ ++G ++ R E+L++ E+G + + +
Sbjct: 5 VTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-------DNLYIAQLDVRN 57
Query: 61 ADAVEGL 67
A+E +
Sbjct: 58 RAAIEEM 64
Score = 27.5 bits (62), Expect = 6.7
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDF 380
V+ F+ LR + + + + PGLV T+F
Sbjct: 154 VRQFSLNLRTDLHGTAVRVTDIEPGLVGG--TEF 185
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 132 bits (334), Expect = 6e-36
Identities = 54/215 (25%), Positives = 85/215 (39%), Gaps = 14/215 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG GIG+ A+E A+ +VL L++TA + + G + D S +
Sbjct: 36 ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-LGAKVHTFVVDCSNRED 94
Query: 144 ---ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
+ K+K E+ G + ILVNN G Y L + + +N+ TK
Sbjct: 95 IYSSAKKVKAEI-GD-VSILVNNAG--VVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAF 150
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVE---YQKYGITVQH 257
LP M + G IV V+S++ P Y +SK F + L E Q G+
Sbjct: 151 LPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTC 210
Query: 258 IAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAV 292
+ P FV+T F + E+ +
Sbjct: 211 LCPNFVNT---GFIKNPSTSLGPTLEPEEVVNRLM 242
Score = 46.9 bits (112), Expect = 4e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG GIG+ A+E A+ +VL L++TA +
Sbjct: 36 ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC 75
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 131 bits (331), Expect = 9e-36
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 11/186 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG+ L G +V ++RT L AKE V + D +
Sbjct: 12 VTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDL--GDWDATEK 69
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
AL I + +LVNN P E+ + ++N+ + ++++V
Sbjct: 70 ALGGI------GPVDLLVNNAALVIMQP--FLEVTKEAFDRSFSVNLRSVFQVSQMVARD 121
Query: 204 MKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
M RG G+IVNVSS +P Y+++K + ++A+ +E + I V + P
Sbjct: 122 MINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTV 181
Query: 263 VSTKMN 268
V T M
Sbjct: 182 VLTDMG 187
Score = 53.6 bits (130), Expect = 2e-08
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG+ L G +V ++RT L AKE
Sbjct: 12 VTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP 52
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 130 bits (330), Expect = 1e-35
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG- 141
++TG + GIG+A A LA G + + +R +EKL+ E+ G + ++ D+++
Sbjct: 11 LITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-GAKVHVLELDVADRQ 69
Query: 142 --KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDL--WN-LINLNIATTTML 196
AA+ L G + ILVNN G M L + + D W +I+ N+ +
Sbjct: 70 GVDAAVASTVEALGG--LDILVNNAGI-----MLLGPVEDADTTDWTRMIDTNLLGLMYM 122
Query: 197 TKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQ 256
T+ LP + R +G +V +SS + VY A+K + FSE LR E + G+ V
Sbjct: 123 TRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVV 181
Query: 257 HIAPAFVSTKMNNFSYRVRNK 277
I P T + +
Sbjct: 182 VIEPGTTDT---ELRGHITHT 199
Score = 49.8 bits (120), Expect = 4e-07
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
+TG + GIG+A A LA G + + +R +EKL+ E+ + +
Sbjct: 12 ITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVH----VLELDVAD 67
Query: 61 ADAVEGL 67
V+
Sbjct: 68 RQGVDAA 74
Score = 27.9 bits (63), Expect = 6.6
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDF 380
V F+E LR E G+ ++ PG T+
Sbjct: 162 VNAFSETLRQEVTERGVRVVVIEPGTTD---TEL 192
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 130 bits (329), Expect = 2e-35
Identities = 44/193 (22%), Positives = 69/193 (35%), Gaps = 21/193 (10%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS--- 139
+ GIG + EL +R + +I +E A+ V D++
Sbjct: 9 IFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPV 68
Query: 140 -EGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNL-INLNIATTTMLT 197
E K L KI +L+ T+ IL+N G I + I +N T
Sbjct: 69 AESKKLLKKIFDQLK--TVDILINGAG-----------ILDDHQIERTIAINFTGLVNTT 115
Query: 198 KLVLPQMKER---GRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGIT 254
+L +R G I N+ S + VY+ASK + F+ +L G+T
Sbjct: 116 TAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVT 175
Query: 255 VQHIAPAFVSTKM 267
I P T +
Sbjct: 176 AYSINPGITRTPL 188
Score = 45.7 bits (109), Expect = 9e-06
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
GIG + EL +R + +I +E A+
Sbjct: 10 FVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK 49
Score = 30.7 bits (70), Expect = 0.76
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
Query: 350 FTEGLRIEYENSGLTFQLLSPGLVSSKMTD-FNPSGQKSKLLSA--------TPEQFARS 400
FT L +G+T ++PG+ + + FN ++ T EQ ++
Sbjct: 161 FTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQN 220
Query: 401 AVK 403
VK
Sbjct: 221 FVK 223
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 130 bits (330), Expect = 3e-35
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 83 MVTGCTDGIGQAYAHELARRG---INIVLISRTLEKLKKTAKEIETTH-GVQTKIIAADM 138
++TG + GIG+A A E + ++L +R LEKL++ K I+ + + D+
Sbjct: 37 LITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDI 96
Query: 139 SEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDL--WN-LINLNIATTT 194
++ + I+ + I ILVNN G + D + + + + N+
Sbjct: 97 TQAEKIKPFIENLPQEFKDIDILVNNAG----KALGSDRVGQIATEDIQDVFDTNVTALI 152
Query: 195 MLTKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGIT 254
+T+ VLP + + G IVN+ S + +P ++Y ASK + F+++LR E I
Sbjct: 153 NITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIR 212
Query: 255 VQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 289
V IAP V T FS VR + + EQ
Sbjct: 213 VILIAPGLVET---EFSL-VR----YRGNEEQAKN 239
Score = 46.1 bits (110), Expect = 1e-05
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 1 VTGCTDGIGQAYAHELARRG---INIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQ 57
+TG + GIG+A A E + ++L +R LEKL++ K I + +
Sbjct: 38 ITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKV--HVAQLD 95
Query: 58 ITIADAVEGL 67
IT A+ ++
Sbjct: 96 ITQAEKIKPF 105
Score = 28.0 bits (63), Expect = 5.5
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDF 380
V FT+ LR E N+ + L++PGLV T+F
Sbjct: 195 VGAFTDSLRKELINTKIRVILIAPGLVE---TEF 225
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 130 bits (329), Expect = 3e-35
Identities = 40/212 (18%), Positives = 88/212 (41%), Gaps = 4/212 (1%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
++G +G A A +G ++VL +RT+E+L+ AK++ T G + + D+++
Sbjct: 16 ISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-GRRALSVGTDITDDAQ 74
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
+ ++ + + +++NN + + + I L + L + P
Sbjct: 75 VAHLVDETMKAYGRVDVVINNAFRVPSMKP-FANTTFEHMRDAIELTVFGALRLIQGFTP 133
Query: 203 QMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
++E GA+VNV+S + Y +K + S+ L E + GI V + P +
Sbjct: 134 ALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGY 192
Query: 263 VSTKMNNFSYRVRNKSFFVPDAEQYARSAVST 294
+ + + + + Y +A +
Sbjct: 193 IWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS 224
Score = 47.5 bits (114), Expect = 3e-06
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
++G +G A A +G ++VL +RT+E+L+ AK++
Sbjct: 16 ISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQV 55
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 129 bits (327), Expect = 4e-35
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 11/186 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG+ L G +V +SRT L +E V D+ +
Sbjct: 12 VTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPV-----CVDLGD-WE 65
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
A ++ + + +LVNN P E+ + +N+ ++++V
Sbjct: 66 ATERALGSVGP--VDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAVIQVSQIVARG 121
Query: 204 MKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
+ RG GAIVNVSS + +VY ++K + ++ + +E + I V + P
Sbjct: 122 LIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTV 181
Query: 263 VSTKMN 268
V T M
Sbjct: 182 VMTSMG 187
Score = 52.1 bits (126), Expect = 7e-08
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG+ L G +V +SRT L +E
Sbjct: 12 VTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP 52
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 130 bits (330), Expect = 4e-35
Identities = 41/190 (21%), Positives = 85/190 (44%), Gaps = 10/190 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
+TG G+G+ L+ G V+ SR ++ LK TA++I + G + I D+ +
Sbjct: 31 ITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDM 90
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKL 199
+ + ++ GH I++NN N+ P + + W + ++ + T +T
Sbjct: 91 VQNTVSELIKVA-GH-PNIVINNAAGNFISP--TERLSPNA-WKTITDIVLNGTAFVTLE 145
Query: 200 VLPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
+ Q+ + + A +++++ A++K + S++L E+ KYG+ I
Sbjct: 146 IGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVI 205
Query: 259 APAFVSTKMN 268
P + TK
Sbjct: 206 QPGPIKTKGA 215
Score = 55.7 bits (135), Expect = 7e-09
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG G+G+ L+ G V+ SR ++ LK TA++I
Sbjct: 31 ITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQI 70
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center
for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 129 bits (326), Expect = 5e-35
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 8/189 (4%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG + G+G+ A A+ G +V+ RT EKL++ EIE Q + D+
Sbjct: 11 ITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIE-QFPGQILTVQMDVRNTDD 69
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
I+ E I IL+NN N+ P +++ WN +IN+ + T ++ +
Sbjct: 70 IQKMIEQIDEKFGRIDILINNAAGNFICP--AEDLSVNG-WNSVINIVLNGTFYCSQAIG 126
Query: 202 PQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEY-QKYGITVQHIA 259
E+G G I+N+ ++ P AA+K + ++ L VE+ +KYGI V IA
Sbjct: 127 KYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIA 186
Query: 260 PAFVSTKMN 268
P +
Sbjct: 187 PGPIERTGG 195
Score = 52.1 bits (126), Expect = 9e-08
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG + G+G+ A A+ G +V+ RT EKL++ EI
Sbjct: 11 ITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEI 50
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 129 bits (327), Expect = 6e-35
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 6/185 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI-ETTHGVQTKIIAADMSEGK 142
VTG T GIG+A A L G N+++ R E + +T KEI + + AD+ +
Sbjct: 15 VTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT-E 73
Query: 143 AALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
+ + + IL+NN+G P+ +IP+ D + L +NI + LT+ L
Sbjct: 74 QGCQDVIEKYPK--VDILINNLGI--FEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLK 129
Query: 203 QMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
+M ER G ++ ++S + P Y+A+K S +L +TV I P
Sbjct: 130 KMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGS 189
Query: 263 VSTKM 267
T+
Sbjct: 190 TLTEG 194
Score = 49.9 bits (120), Expect = 4e-07
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
VTG T GIG+A A L G N+++ R E + +T KEI I+ +
Sbjct: 15 VTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVA--DLGT 72
Query: 61 ADAVEGL 67
+ +
Sbjct: 73 EQGCQDV 79
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 128 bits (324), Expect = 1e-34
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 7/186 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG GIG+ A A G ++V+ + EI+ G Q D++ +
Sbjct: 16 ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDITSEQE 74
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ + ILVNN G P ++P D + LN+ + L++LV
Sbjct: 75 LSALADFAISKLGKVDILVNNAGGGGPKPF---DMPMAD-FRRAYELNVFSFFHLSQLVA 130
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
P+M++ G G I+ ++S + T YA+SK + + + + I V IAP
Sbjct: 131 PEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPG 190
Query: 262 FVSTKM 267
+ T
Sbjct: 191 AILTDA 196
Score = 46.3 bits (111), Expect = 6e-06
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG GIG+ A A G ++V+ + EI
Sbjct: 16 ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEI 55
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 128 bits (325), Expect = 1e-34
Identities = 50/210 (23%), Positives = 87/210 (41%), Gaps = 21/210 (10%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
++TG + GIG+A A + G ++L++R +E+LK T Q + D
Sbjct: 20 VITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP--NTLCAQVDV--TDKYTFD 75
Query: 143 AALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDL--WN-LINLNIATTTMLTKL 199
A+ + + +VNN G M L +I ++ W + ++N+ +
Sbjct: 76 TAITRAEKIY--GPADAIVNNAGM-----MLLGQIDTQEANEWQRMFDVNVLGLLNGMQA 128
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
VL MK R G I+N+SS + + +P Y +K + SE +R E + V IA
Sbjct: 129 VLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIA 188
Query: 260 PAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 289
P+ V T ++ + Y
Sbjct: 189 PSAVKT---ELLSHTTSQQ----IKDGYDA 211
Score = 45.3 bits (108), Expect = 1e-05
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 10/67 (14%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
+TG + GIG+A A + G ++L++R +E+LK + +T
Sbjct: 21 ITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTL----------CAQVDVTD 70
Query: 61 ADAVEGL 67
+
Sbjct: 71 KYTFDTA 77
Score = 28.3 bits (64), Expect = 4.8
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTD 379
V +E +R E S + ++P V +++
Sbjct: 166 VHAISENVREEVAASNVRVMTIAPSAVKTELLS 198
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 128 bits (325), Expect = 1e-34
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+TG T G G+A A A G ++VL R E+L+ A E+ + + D+ +
Sbjct: 25 FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA--KTRVLPLTLDVRDRA 82
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMY-LDEIPERDL--WN-LINLNIATTTMLT 197
A + E T+ L+NN G D DL W+ +++ NI T
Sbjct: 83 AMSAAVDNLPEEFATLRGLINNAGL-----ALGTDPAQSCDLDDWDTMVDTNIKGLLYST 137
Query: 198 KLVLPQMKERGRGA-IVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQ 256
+L+LP++ G GA IVN+ S + P+P VY +K ++ FS LR + Q G+ V
Sbjct: 138 RLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVT 197
Query: 257 HIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 289
++ P + FS VR F D +Y +
Sbjct: 198 NLEPGLCES---EFSL-VR----FGGDQARYDK 222
Score = 49.9 bits (120), Expect = 4e-07
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG T G G+A A A G ++VL R E+L+ A E+
Sbjct: 26 ITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELS 66
Score = 28.0 bits (63), Expect = 5.2
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDF 380
V+ F+ LR + + +G+ L PGL ++F
Sbjct: 178 VEQFSLNLRCDLQGTGVRVTNLEPGLCE---SEF 208
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 129 bits (326), Expect = 2e-34
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 10/204 (4%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIE----TTHGVQTKIIAADM 138
+VTG GIG+A EL G N+V+ SR LE+LK A E++ T + I ++
Sbjct: 22 IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI 81
Query: 139 SEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNL-INLNIATTTML 196
+ + +K+ L+ I LVNN G + P + I + W+ + N+ T +
Sbjct: 82 RNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP--AEHISSKG-WHAVLETNLTGTFYM 138
Query: 197 TKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQ 256
K V + G+IVN+ ++ +PL A++ + +++L +E+ GI +
Sbjct: 139 CKAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAARAGVYNLTKSLALEWACSGIRIN 197
Query: 257 HIAPAFVSTKMNNFSYRVRNKSFF 280
+AP + ++ +Y +SFF
Sbjct: 198 CVAPGVIYSQTAVENYGSWGQSFF 221
Score = 53.8 bits (130), Expect = 3e-08
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG+A EL G N+V+ SR LE+LK A E+
Sbjct: 23 VTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADEL 62
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 128 bits (323), Expect = 2e-34
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 10/189 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI-ETTHGVQTKIIAADMSEG- 141
VTG + GIG A L G + +R E+L+ + + G + D+ +
Sbjct: 13 VTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDAL 72
Query: 142 --KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
+A + + L ILVNN G E + W+ + L + +
Sbjct: 73 QVRAFAEACERTLGC--ASILVNNAGQ--GRVSTFAETTDEA-WSEELQLKFFSVIHPVR 127
Query: 199 LVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
LPQ++ R AIV V+S QP P +A++ ++ ++ E+ G+ V I
Sbjct: 128 AFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGI 187
Query: 259 APAFVSTKM 267
V +
Sbjct: 188 LIGLVESGQ 196
Score = 46.8 bits (112), Expect = 5e-06
Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPC-VTQIT 59
VTG + GIG A L G + +R E+L+ + + C V
Sbjct: 13 VTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD-- 70
Query: 60 IADAVEGL 67
A V
Sbjct: 71 -ALQVRAF 77
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 128 bits (323), Expect = 2e-34
Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 7/191 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG IG A LA G +++ K +++ G + D++ ++
Sbjct: 18 VTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-GHDVSSVVMDVTNTES 76
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ +++ E + ILV G + D + W +++N+ + V
Sbjct: 77 VQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQ--WLKQVDINLNGMFRSCQAVG 134
Query: 202 PQMKERGRGAIVNVSS--SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
M E+ +G IV + S Y ASK + + +L E+ +GI +A
Sbjct: 135 RIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVA 194
Query: 260 PAFVSTKMNNF 270
P ++ T + F
Sbjct: 195 PTYIETTLTRF 205
Score = 47.9 bits (115), Expect = 2e-06
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG IG A LA G +++ K +++
Sbjct: 18 VTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDL 57
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 128 bits (323), Expect = 2e-34
Identities = 38/186 (20%), Positives = 82/186 (44%), Gaps = 5/186 (2%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG GIG A R G + V+ SR+L ++ A+++ G + ++ D+ A
Sbjct: 32 ITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPA 91
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ + L+ I IL+N N+ P + + +++++ + T +++++
Sbjct: 92 VMAAVDQALKEFGRIDILINCAAGNFLCP--AGALSFNA-FKTVMDIDTSGTFNVSRVLY 148
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
+ G IVN++++ + L ++K + + L VE+ I V +AP
Sbjct: 149 EKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPG 208
Query: 262 FVSTKM 267
+S
Sbjct: 209 PISGTE 214
Score = 51.5 bits (124), Expect = 1e-07
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG GIG A R G + V+ SR+L ++ A+++
Sbjct: 32 ITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKL 71
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 127 bits (322), Expect = 2e-34
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 11/192 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
VTG + GIG+ A +L + G + + R L+ L+ A+E ++ G Q + D S+
Sbjct: 10 VTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GGQCVPVVCDSSQESE 68
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMY-----LDEIPERDLWNLINLNIATTTM 195
++ +++ E +G + +LVNN A + E P ++ N+ +
Sbjct: 69 VRSLFEQVDREQQGR-LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYF 127
Query: 196 LTKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITV 255
+ M G+G IV +SS + Y K + E +++G++
Sbjct: 128 CSVYGARLMVPAGQGLIVVISSPG-SLQYMFNVPYGVGKAACDKLAADCAHELRRHGVSC 186
Query: 256 QHIAPAFVSTKM 267
+ P V T++
Sbjct: 187 VSLWPGIVQTEL 198
Score = 46.8 bits (112), Expect = 4e-06
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG+ A +L + G + + R L+ L+ A+E
Sbjct: 10 VTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEA 49
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 128 bits (323), Expect = 2e-34
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 13/195 (6%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG- 141
++TG + GIG+ A A G + + +R + L+ A EI G + I D+++
Sbjct: 36 LITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-GGKALPIRCDVTQPD 94
Query: 142 --KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
+ LD++ EL G I I V N G + ++P + + + + N+ + +
Sbjct: 95 QVRGMLDQMTGEL-GG-IDIAVCNAGIVSVQA--MLDMPLEE-FQRIQDTNVTGVFLTAQ 149
Query: 199 LVLPQMKERGR-GAIVNVSS--SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITV 255
M ++G G I+ +S + Y SK + + ++A+ VE + I V
Sbjct: 150 AAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRV 209
Query: 256 QHIAPAFVSTKMNNF 270
++P ++ T++
Sbjct: 210 NSVSPGYIRTELVEP 224
Score = 51.4 bits (124), Expect = 2e-07
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG + GIG+ A A G + + +R + L+ A EI
Sbjct: 37 ITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEI 76
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 127 bits (322), Expect = 4e-34
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTL-EKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+TG T GIG A A LA+ G NIVL ++++ E+ ADM++
Sbjct: 30 ITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPS 89
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
D + + ILVNN G + +++ P + W+ +I +N++++ +
Sbjct: 90 EIADMMAMVADRFGGADILVNNAGVQFVEK--IEDFPV-EQWDRIIAVNLSSSFHTIRGA 146
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
+P MK++G G I+N++S+ P + Y A+K I ++ + +E + G+TV I P
Sbjct: 147 IPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICP 206
Query: 261 AFVSTKM 267
+V T +
Sbjct: 207 GYVLTPL 213
Score = 41.5 bits (98), Expect = 3e-04
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKE 39
+TG T GIG A A LA+ G NIVL +T +
Sbjct: 30 ITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTD 68
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 127 bits (321), Expect = 4e-34
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 77 KKFTGP--MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIET--THGVQTK 132
+F+ ++TG ++GIG+ A A+ G N+ + R+ E+L++T + I Q
Sbjct: 2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61
Query: 133 IIAADMSEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMY--LDEIPERDLWNLINLN 189
+ AD++ I + L+ I +LVNN GA + + LN
Sbjct: 62 SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 121
Query: 190 IATTTMLTKLVLPQMKERGRGAIVNVSSSSEG-QPWPLFTVYAASKIYIRYFSEALRVEY 248
+ +TK V P + G IVNVSS G Q P F YA +K + ++ + ++
Sbjct: 122 LQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180
Query: 249 QKYGITVQHIAPAFVSTKMNN 269
K+GI V ++P V T N
Sbjct: 181 AKFGIRVNSVSPGMVETGFTN 201
Score = 46.8 bits (112), Expect = 5e-06
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG ++GIG+ A A+ G N+ + R+ E+L++T + I
Sbjct: 11 ITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQII 50
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 127 bits (321), Expect = 6e-34
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 7/197 (3%)
Query: 77 KKFTGP--MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIET--THGVQTK 132
+F+G ++TG ++GIG++ A A+ G + + R ++L++T ++I +
Sbjct: 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81
Query: 133 IIAADMSEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIA 191
+ AD++E D I T L I ILVNN GAN + P LN
Sbjct: 82 AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 141
Query: 192 TTTMLTKLVLPQMKERGRGAIVNVSSSSEG-QPWPLFTVYAASKIYIRYFSEALRVEYQK 250
+T+ + + G IVNVSS G Q + YA +K + ++ ++ +
Sbjct: 142 AVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQ 200
Query: 251 YGITVQHIAPAFVSTKM 267
+G+ V ++P V+T
Sbjct: 201 HGVRVNSVSPGAVATGF 217
Score = 46.1 bits (110), Expect = 1e-05
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG ++GIG++ A A+ G + + R ++L++T ++I
Sbjct: 31 ITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQI 70
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 126 bits (318), Expect = 2e-33
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 6/188 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG G+G+ A L+ G ++V+ R + L A EI G + + D+ +
Sbjct: 38 VTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQ 97
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ +LVNN G+N P+ L+E+ WN ++ N+ + T+
Sbjct: 98 VAALFAAVRAEFARLDLLVNNAGSN-VPPVPLEEVTFEQ-WNGIVAANLTGAFLCTQHAF 155
Query: 202 PQMKERGR--GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
MK + G I+N S S P P Y A+K I +++ ++ + + I I
Sbjct: 156 RMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQID 215
Query: 260 PAFVSTKM 267
+T M
Sbjct: 216 IGNAATDM 223
Score = 46.8 bits (112), Expect = 5e-06
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG G+G+ A L+ G ++V+ R + L A EI
Sbjct: 38 VTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEI 77
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 125 bits (317), Expect = 2e-33
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG G+G+A A LA G + L R L+ L++TA EI G + D+++ +
Sbjct: 33 VTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----GDDALCVPTDVTDPDS 88
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+E + +L NN G + ++++ W +++ N+ + T+
Sbjct: 89 VRALFTATVEKFGRVDVLFNNAGTG-APAIPMEDLTF-AQWKQVVDTNLTGPFLCTQEAF 146
Query: 202 PQMKERGR--GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
MK + G I+N S S P P Y A+K I +++ ++ + + I I
Sbjct: 147 RVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQID 206
Query: 260 PAFVSTKM 267
T M
Sbjct: 207 IGNADTPM 214
Score = 50.7 bits (122), Expect = 2e-07
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG G+G+A A LA G + L R L+ L++TA EIG
Sbjct: 33 VTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG 73
Score = 29.5 bits (67), Expect = 2.1
Identities = 8/59 (13%), Positives = 16/59 (27%), Gaps = 6/59 (10%)
Query: 350 FTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLS------ATPEQFARSAV 402
T+ ++ + + G + M +G LS A + V
Sbjct: 187 LTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVV 245
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 125 bits (317), Expect = 2e-33
Identities = 50/195 (25%), Positives = 76/195 (38%), Gaps = 14/195 (7%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS--EG 141
VTG + GIGQ A L G + + +R E TA + Q I AD+S G
Sbjct: 34 VTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQA--IPADLSSEAG 91
Query: 142 KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
L + EL + ILVNN G ++ L+ P W ++ LN+ + + +
Sbjct: 92 ARRLAQALGELSAR-LDILVNNAGTSWGAA--LESYPVSG-WEKVMQLNVTSVFSCIQQL 147
Query: 201 LPQMK----ERGRGAIVNVSSSSEGQPWPLFTV-YAASKIYIRYFSEALRVEYQKYGITV 255
LP ++ ++N+ S + Y SK + S L E I V
Sbjct: 148 LPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINV 207
Query: 256 QHIAPAFVSTKMNNF 270
IAP ++M
Sbjct: 208 NVIAPGRFPSRMTRH 222
Score = 50.6 bits (122), Expect = 3e-07
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIGQ A L G + + +R E TA +
Sbjct: 34 VTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL 73
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 125 bits (316), Expect = 2e-33
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLIS-RTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG T GIG A LA +G +IVL +++K + HGV+ AD+S+G+
Sbjct: 9 VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE 68
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
A + + I ILVNN G +T +++ P W+ ++ LN++ T
Sbjct: 69 AVRGLVDNAVRQMGRIDILVNNAGIQHTAL--IEDFPTEK-WDAILALNLSAVFHGTAAA 125
Query: 201 LPQMKERGRGAIVNVSS-----SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITV 255
LP MK++G G I+N++S +S + Y A+K + F++ +E GIT
Sbjct: 126 LPHMKKQGFGRIINIASAHGLVASANKS-----AYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 256 QHIAPAFVSTKM 267
I P +V T +
Sbjct: 181 NAICPGWVRTPL 192
Score = 41.5 bits (98), Expect = 3e-04
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLIS-RTLEKLKKTAKEI 40
VTG T GIG A LA +G +IVL +++K +
Sbjct: 9 VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGL 49
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 125 bits (317), Expect = 2e-33
Identities = 38/189 (20%), Positives = 73/189 (38%), Gaps = 6/189 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTH--GVQTKIIAADMSEG 141
VTG GIG+ A L G +++++ R +KL +E+E G + D++
Sbjct: 16 VTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNE 75
Query: 142 KAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKL 199
+ H + +V+ G + + ++ W ++LN+ T + K
Sbjct: 76 DETARAVDAVTAWHGRLHGVVHCAGGSENIGP-ITQVDSEA-WRRTVDLNVNGTMYVLKH 133
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
+M G G+ V +SS + F Y +K + + + E + V I
Sbjct: 134 AAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIR 193
Query: 260 PAFVSTKMN 268
P + T +
Sbjct: 194 PGLIRTDLV 202
Score = 47.9 bits (115), Expect = 2e-06
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG+ A L G +++++ R +KL +E+
Sbjct: 16 VTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQEL 55
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 124 bits (313), Expect = 4e-33
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 9/191 (4%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIA-----AD 137
+VTG GIG A A A G ++VL+ RT L + + +I++ Q IIA A
Sbjct: 18 LVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENAT 77
Query: 138 MSEGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLT 197
+ + +++ E + L++N L+++P+ D ++++N+ T MLT
Sbjct: 78 AQQYRELAARVEHEFGR--LDGLLHNASII-GPRTPLEQLPDEDFMQVMHVNVNATFMLT 134
Query: 198 KLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQ-KYGITVQ 256
+ +LP +K +I SSS + + Y SK + L E + +
Sbjct: 135 RALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRAN 194
Query: 257 HIAPAFVSTKM 267
I P T M
Sbjct: 195 SINPGATRTGM 205
Score = 52.5 bits (127), Expect = 6e-08
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG A A A G ++VL+ RT L + + +I
Sbjct: 19 VTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQI 58
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 124 bits (313), Expect = 7e-33
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIA--ADMSEG 141
+TG ++GIG+A A AR G + + R E+L++T ++I + + + AD++
Sbjct: 11 ITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD 70
Query: 142 KAALDKIKTELEGH-TIGILVNNVGANYTYPMY--LDEIPERDLWNLINLNIATTTMLTK 198
+ + T L + ILVNN GA +NLN+ + LTK
Sbjct: 71 AGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTK 130
Query: 199 LVLPQMKERGRGAIVNVSSSSEG-QPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQH 257
+P + G IVN+SS + G P F Y+ +K I ++ ++ ++GI V
Sbjct: 131 KAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNS 189
Query: 258 IAPAFVSTKM 267
I+P V+T
Sbjct: 190 ISPGLVATGF 199
Score = 45.7 bits (109), Expect = 1e-05
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG ++GIG+A A AR G + + R E+L++T ++I
Sbjct: 11 ITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQIL 51
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 123 bits (310), Expect = 1e-32
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL--ISRTLEKLKKTAKEIETTHGVQTKIIAADMS-- 139
VTG GIG+ + +LA G +I + + + E+ +T K IE + + D++
Sbjct: 7 VTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQKAVFVGLDVTDK 65
Query: 140 -EGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTK 198
+A+D+ +L G +LVNN G L E+ E DL + ++N+ + +
Sbjct: 66 ANFDSAIDEAAEKLGG--FDVLVNNAG--IAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121
Query: 199 LVLPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQH 257
+ E G G I+N +S + Q +P+ + Y+ +K +R ++A E G TV
Sbjct: 122 AASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNA 181
Query: 258 IAPAFVSTKM 267
AP V T M
Sbjct: 182 YAPGIVGTGM 191
Score = 42.5 bits (101), Expect = 1e-04
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL--ISRTLEKLKKTAKEI 40
VTG GIG+ + +LA G +I + + + E+ +T K I
Sbjct: 7 VTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLI 48
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 123 bits (310), Expect = 1e-32
Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 5/187 (2%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+VTG GIG+A A L + G + + K A EI G + D+S+
Sbjct: 6 LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVKVDVSDRD 64
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVL 201
++ + ++VNN G ++ I + + N+N+ + +
Sbjct: 65 QVFAAVEQARKTLGGFDVIVNNAG--VAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122
Query: 202 PQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
K+ G G I+N S + P VY++SK +R ++ + GITV P
Sbjct: 123 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 182
Query: 261 AFVSTKM 267
V T M
Sbjct: 183 GIVKTPM 189
Score = 44.8 bits (107), Expect = 2e-05
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG+A A L + G + + K A EI
Sbjct: 7 VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEI 46
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 122 bits (309), Expect = 1e-32
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 19/186 (10%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG- 141
+V + GIG+A A L++ G + + +R E LK++ + D+ +
Sbjct: 23 LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY----------VVCDLRKDL 72
Query: 142 KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVL 201
+K+K + ILV N G + DE+ D I+ + + L
Sbjct: 73 DLLFEKVKE------VDILVLNAGG--PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYL 124
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
P MKE+G G IV ++S S P ++++ + F + L E YGITV +AP
Sbjct: 125 PAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPG 184
Query: 262 FVSTKM 267
+ T+
Sbjct: 185 WTETER 190
Score = 49.8 bits (120), Expect = 5e-07
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
V + GIG+A A L++ G + + +R E LK++
Sbjct: 24 VLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY 63
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 122 bits (309), Expect = 1e-32
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 13/188 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI--SRTLEKLKKTAKEIETTHGVQTKIIAADMSEG 141
VTG + GIG++ L + V+ +R+ LKK ++ G + + D++E
Sbjct: 7 VTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGDITED 62
Query: 142 KAALDKIKTELEGH-TIGILVNNVGANYTYPM-YLDEIPERDLWNLINLNIATTTMLTKL 199
+ ++GH I LV N G P+ ++EI L ++N + L +
Sbjct: 63 SVLKQLVNAAVKGHGKIDSLVANAG--VLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGI 120
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
LP++K+ G +V VSS + + + Y +SK + +F+ L E + + +A
Sbjct: 121 ALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVA 177
Query: 260 PAFVSTKM 267
P V T M
Sbjct: 178 PGIVDTDM 185
Score = 44.2 bits (105), Expect = 4e-05
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI--SRTLEKLKKTAKEIG 41
VTG + GIG++ L + V+ +R+ LKK ++ G
Sbjct: 7 VTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG 49
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 122 bits (308), Expect = 2e-32
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 7/188 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG + G+G+A A LA G NIV+ +R+ + +TA+EIE GV+ ++ A++ +
Sbjct: 9 VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-GVKVLVVKANVGQPA 67
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
+ + E + + VNN + + E+ E W+ +N+N +
Sbjct: 68 KIKEMFQQIDETFGRLDVFVNNAAS--GVLRPVMELEETH-WDWTMNINAKALLFCAQEA 124
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
M++ G G IV++SS + +T SK + + L VE I V ++
Sbjct: 125 AKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSG 184
Query: 261 AFVSTKMN 268
+ T
Sbjct: 185 GAIDTDAL 192
Score = 39.8 bits (94), Expect = 0.001
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG + G+G+A A LA G NIV+ +R+ + +TA+EI
Sbjct: 9 VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEI 49
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 122 bits (309), Expect = 3e-32
Identities = 42/190 (22%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + GIG A A A+ G ++ + + +K +T +GV +K ++S+ K+
Sbjct: 39 VTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT-YGVHSKAYKCNISDPKS 97
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
+ I + + TI + V N G +T +D +I++++ + +
Sbjct: 98 VEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGK 157
Query: 203 QMKERGRGAIVNVSS-SSEGQPWPLF-TVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
K+ G+G+++ SS S + P Y +K + +++L +E+ + V I+P
Sbjct: 158 IFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISP 216
Query: 261 AFVSTKMNNF 270
++ T + +F
Sbjct: 217 GYIDTDITDF 226
Score = 45.2 bits (108), Expect = 1e-05
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG A A A+ G ++ + + +K
Sbjct: 39 VTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQ 78
Score = 27.9 bits (63), Expect = 5.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 368 LSPGLVSSKMTDFNPSGQKSKLLSATP 394
+SPG + + +TDF K+K TP
Sbjct: 214 ISPGYIDTDITDFASKDMKAKWWQLTP 240
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 121 bits (306), Expect = 3e-32
Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 19/191 (9%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS--E 140
+VTG + GIG+A A L RG + + SR E+ + + + D+ +
Sbjct: 6 LVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---------SLGAVPLPTDLEKDD 56
Query: 141 GKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKL 199
K + + L + +LV+ N P E+ + W ++ L++ +L +
Sbjct: 57 PKGLVKRALEAL--GGLHVLVHAAAVNVRKP--ALELSYEE-WRRVLYLHLDVAFLLAQA 111
Query: 200 VLPQMKERGRGAIVNVSS--SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQH 257
P M E G G ++ + S + Y +K + + AL E+ + GI V
Sbjct: 112 AAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNL 171
Query: 258 IAPAFVSTKMN 268
+ P +V T+
Sbjct: 172 LCPGYVETEFT 182
Score = 50.2 bits (121), Expect = 3e-07
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGM 42
VTG + GIG+A A L RG + + SR E+ ++ + +
Sbjct: 7 VTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPL 48
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 121 bits (306), Expect = 3e-32
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 7/186 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG+A A A+ G ++V+ E + A I G + + ++++ +
Sbjct: 17 VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-GGKAIGLECNVTDEQH 75
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
IK L+ I +LVNN G P ++P D + LN+ + L++L
Sbjct: 76 REAVIKAALDQFGKITVLVNNAGGGGPKPF---DMPMSD-FEWAFKLNLFSLFRLSQLAA 131
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
P M++ G GAI+N+SS + Y +SK + + + + + GI V IAP
Sbjct: 132 PHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPG 191
Query: 262 FVSTKM 267
+ T
Sbjct: 192 AIKTDA 197
Score = 46.4 bits (111), Expect = 7e-06
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG+A A A+ G ++V+ E + A I
Sbjct: 17 VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAI 56
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 121 bits (306), Expect = 4e-32
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 12/210 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
+TG GIG+A+A R G + + +E+ ++ A EI G + D++
Sbjct: 13 ITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GPAAYAVQMDVTRQDS 68
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
AA+ G + ILVNN + EI L +N+A T +
Sbjct: 69 IDAAIAATVEHAGG--LDILVNNAA--LFDLAPIVEITRESYEKLFAINVAGTLFTLQAA 124
Query: 201 LPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
QM +GR G I+N++S + + L +Y A+K + +++ ++ K+ I V IA
Sbjct: 125 ARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIA 184
Query: 260 PAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 289
P V + + + + P E+
Sbjct: 185 PGVVDGEHWDGVDALFARYENRPRGEKKRL 214
Score = 46.4 bits (111), Expect = 6e-06
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG GIG+A+A R G + + +E+ ++ A EIG
Sbjct: 13 ITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG 53
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 120 bits (304), Expect = 6e-32
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 16/188 (8%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+VTG T G+G +L+R I + + R E L A+ I +D+ +
Sbjct: 9 VVTGATGGMGIEIVKDLSRDHI-VYALGRNPEHLAALAEIEGVE------PIESDIVKEV 61
Query: 143 AALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDL--WN-LINLNIATTTMLTKL 199
+ + LV+ I + W+ ++LN+ L++
Sbjct: 62 LEEGGVDKLKNLDHVDTLVHAAAV-----ARDTTIEAGSVAEWHAHLDLNVIVPAELSRQ 116
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
+LP ++ G ++ ++S + P P T+YAASK +R ++A R E GI V ++
Sbjct: 117 LLPALRAA-SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVS 175
Query: 260 PAFVSTKM 267
P +T M
Sbjct: 176 PGPTNTPM 183
Score = 44.1 bits (105), Expect = 3e-05
Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
VTG T G+G +L+R I + + R E L A+ G+ P + I
Sbjct: 10 VTGATGGMGIEIVKDLSRDHI-VYALGRNPEHLAALAEIEGVE---------PIESDIVK 59
Query: 61 ADAVEGL 67
EG
Sbjct: 60 EVLEEGG 66
Score = 34.1 bits (79), Expect = 0.053
Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSA---TPEQFARS 400
++ + R E N+G+ +SPG ++ M Q + P++ A +
Sbjct: 153 LRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANA 209
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 120 bits (304), Expect = 8e-32
Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 12/189 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIGQAYA LAR G +V+ E + AK+I G +A D+S+ ++
Sbjct: 14 VTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAISVAVDVSDPES 72
Query: 144 ALDKIKTELEGH-TIGILVNNVG-ANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
A L I LVNN +L I + +++N+ T+ V
Sbjct: 73 AKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEY-YKKFMSVNLDGALWCTRAV 131
Query: 201 LPQMKERGRGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
+M +RG GAIVN SS++ Y +K+ I ++ L E I + I
Sbjct: 132 YKKMTKRGGGAIVNQSSTAAWLYSN-----YYGLAKVGINGLTQQLSRELGGRNIRINAI 186
Query: 259 APAFVSTKM 267
AP + T+
Sbjct: 187 APGPIDTEA 195
Score = 45.2 bits (108), Expect = 1e-05
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIGQAYA LAR G +V+ E + AK+I
Sbjct: 14 VTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQI 53
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 121 bits (306), Expect = 1e-31
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 7/216 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG A A E ARRG +VL L++ + G + D+
Sbjct: 36 VTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG-QGFDAHGVVCDVRHLDE 94
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ + ++ +N G L ++ D W +I++++ + + L
Sbjct: 95 MVRLADEAFRLLGGVDVVFSNAGI--VVAGPLAQMNHDD-WRWVIDIDLWGSIHAVEAFL 151
Query: 202 PQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
P++ E+G G I +S + P Y +K + +E L E + GI V + P
Sbjct: 152 PRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCP 211
Query: 261 AFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVSTLG 296
V TK+ + S R+R + + + A + T
Sbjct: 212 MVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQD 247
Score = 44.3 bits (105), Expect = 4e-05
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG A A E ARRG +VL L++ +
Sbjct: 36 VTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLR 76
Score = 30.0 bits (68), Expect = 1.3
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 350 FTEGLRIEYENSGLTFQLLSPGLVSSKMTD--FNPSGQKSKLLSATPEQFARSAVKTLGV 407
E L E + +G+ +L P +V +K+ G + + F + V
Sbjct: 191 LAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESV 250
Query: 408 T 408
+
Sbjct: 251 S 251
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 120 bits (303), Expect = 1e-31
Identities = 48/189 (25%), Positives = 97/189 (51%), Gaps = 8/189 (4%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRT-LEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+TG + G+G++ A A +V+ R+ ++ +EI+ G + + D++
Sbjct: 12 ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-VGGEAIAVKGDVTVES 70
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
++ +++ ++ + +++NN G P+ E+ D WN +I+ N+ + ++
Sbjct: 71 DVINLVQSAIKEFGKLDVMINNAG--LENPVSSHEMSLSD-WNKVIDTNLTGAFLGSREA 127
Query: 201 LPQM-KERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
+ + +G ++N+SS E PWPLF YAASK ++ +E L +EY GI V +I
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187
Query: 260 PAFVSTKMN 268
P ++T +N
Sbjct: 188 PGAINTPIN 196
Score = 37.9 bits (89), Expect = 0.004
Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRT-LEKLKKTAKEI 40
+TG + G+G++ A A +V+ R+ ++ +EI
Sbjct: 12 ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEI 52
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 119 bits (301), Expect = 2e-31
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG- 141
+VTG +DGIG+ A AR G ++L+ R EKL++ A I G Q + D+
Sbjct: 16 LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 75
Query: 142 ----KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTML 196
+ +I + +++N G + E +W ++ +N+ T ML
Sbjct: 76 SENCQQLAQRIAVNY-PR-LDGVLHNAGLLGDVCP-MSEQNP-QVWQDVMQVNVNATFML 131
Query: 197 TKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQ 256
T+ +LP + + G++V SSS Q + YAASK + L EYQ+ + V
Sbjct: 132 TQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RLRVN 190
Query: 257 HIAPAFVSTKM 267
I P T M
Sbjct: 191 CINPGGTRTAM 201
Score = 51.4 bits (124), Expect = 2e-07
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG +DGIG+ A AR G ++L+ R EKL++ A I
Sbjct: 17 VTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHI 56
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 119 bits (300), Expect = 2e-31
Identities = 57/191 (29%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG T GIG A LAR G NIVL EI HGV+ AD+S+
Sbjct: 9 VTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIAR-HGVKAVHHPADLSDVAQ 65
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ ILVNN G + P +++ P + W+ +I LN++ T+L L
Sbjct: 66 IEALFALAEREFGGVDILVNNAGIQHVAP--VEQFPL-ESWDKIIALNLSAVFHGTRLAL 122
Query: 202 PQMKERGRGAIVNVSS-----SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQ 256
P M+ R G I+N++S S G+ Y A+K + ++ + +E +T
Sbjct: 123 PGMRARNWGRIINIASVHGLVGSTGK-----AAYVAAKHGVVGLTKVVGLETATSNVTCN 177
Query: 257 HIAPAFVSTKM 267
I P +V T +
Sbjct: 178 AICPGWVLTPL 188
Score = 39.1 bits (92), Expect = 0.001
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG T GIG A LAR G NIVL EI
Sbjct: 9 VTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEI 46
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 120 bits (303), Expect = 5e-31
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 19/200 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKK-------TAKEIETTHGVQTKIIAA 136
+TG + GIG+A A + A+ G NIV+ ++T + K A+EIE G +
Sbjct: 50 ITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-GGKALPCIV 108
Query: 137 DMSEG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATT 193
D+ + AA++K + G I ILVNN A + P + L ++N+N T
Sbjct: 109 DVRDEQQISAAVEKAIKKFGG--IDILVNNASAISLTN--TLDTPTKRLDLMMNVNTRGT 164
Query: 194 TMLTKLVLPQMKERGRGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEALRVEYQKY 251
+ +K +P +K+ I+N+S + Y +K + + + E+ K
Sbjct: 165 YLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF-KG 223
Query: 252 GITVQHIAPA-FVSTKMNNF 270
I V + P + T +
Sbjct: 224 EIAVNALWPKTAIHTAAMDM 243
Score = 41.7 bits (98), Expect = 3e-04
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKK-------TAKEI 40
+TG + GIG+A A + A+ G NIV+ ++T + K A+EI
Sbjct: 50 ITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEI 96
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 118 bits (299), Expect = 7e-31
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI-ETTHGVQTKIIAADMSEG 141
+VTG + GIG A A L ++G+ +V +RT+ +++ A E + D+S
Sbjct: 36 LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 95
Query: 142 ---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDL--WN-LINLNIATTTM 195
+ I+++ G + I +NN G D + W + N+N+ ++
Sbjct: 96 EDILSMFSAIRSQHSG--VDICINNAG-----LARPDTLLSGSTSGWKDMFNVNVLALSI 148
Query: 196 LTKLVLPQMKERG--RGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEALRVE--YQ 249
T+ MKER G I+N++S S P + Y+A+K + +E LR E
Sbjct: 149 CTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA 208
Query: 250 KYGITVQHIAPAFVSTKM 267
+ I I+P V T+
Sbjct: 209 QTHIRATCISPGVVETQF 226
Score = 49.6 bits (119), Expect = 7e-07
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG + GIG A A L ++G+ +V +RT+ +++ A E
Sbjct: 37 VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECK 77
Score = 28.0 bits (63), Expect = 5.3
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Query: 347 VKYFTEGLRIEYENSGL----TFQLLSPGLVSSKMTDFNPSGQKSK 388
V TEGLR E + T +SPG+V ++ K
Sbjct: 194 VTALTEGLRQELREAQTHIRAT--CISPGVVETQFAFKLHDKDPEK 237
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 115 bits (291), Expect = 4e-30
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 6/188 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + G G A A RG + + + E L++TA+ + + + AD+++
Sbjct: 7 VTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGD 66
Query: 144 ALDKIKTELEGH-TIGILVNNVG-ANYTYPMYLDEIPERDLWN-LINLNIATTTML-TKL 199
I +E I +LVNN G + L P ++ ++ +N+ L +
Sbjct: 67 VNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQ-FDKVMAVNV-RGIFLGCRA 124
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
VLP M +G G IVN++S + +P + Y SK + ++++ V+Y GI +
Sbjct: 125 VLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVC 184
Query: 260 PAFVSTKM 267
P + T M
Sbjct: 185 PGMIETPM 192
Score = 41.3 bits (98), Expect = 3e-04
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + G G A A RG + + + E L++TA+
Sbjct: 7 VTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTH 46
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 116 bits (292), Expect = 4e-30
Identities = 43/210 (20%), Positives = 75/210 (35%), Gaps = 12/210 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
VTG + GIG A A L + G + + + + + + D+++
Sbjct: 17 VTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL----ENGGFAVEVDVTKRAS 72
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
AA+ K L G +L N G + +I + + ++N + ++
Sbjct: 73 VDAAMQKAIDALGG--FDLLCANAGV--STMRPAVDITDEEWDFNFDVNARGVFLANQIA 128
Query: 201 LPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
G IVN +S + PL Y+ASK + +++AL E I V +
Sbjct: 129 CRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVC 188
Query: 260 PAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 289
P FV T M + + A
Sbjct: 189 PGFVKTAMQEREIIWEAELRGMTPEAVRAE 218
Score = 46.0 bits (110), Expect = 1e-05
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG + GIG A A L + G + + + + +
Sbjct: 17 VTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE 57
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 117 bits (294), Expect = 6e-30
Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTH-GVQTKIIAADMSEG- 141
VTG +G+G +L +G + + + + K +E G + + D++
Sbjct: 13 VTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASRE 72
Query: 142 --KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
K A D+++ G + IL NN G N P+ +E D W+ L+ +N+
Sbjct: 73 GFKMAADEVEARF-GP-VSILCNNAGVNLFQPI--EESSYDD-WDWLLGVNLHGVVNGVT 127
Query: 199 LVLPQMKER------GRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYG 252
+P+M ER G +VN +S + +Y +K +R SE+L KY
Sbjct: 128 TFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYE 187
Query: 253 ITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSA 291
I V + P V + + S +R + +
Sbjct: 188 IGVSVLCPGLVKSYIYA-SDDIRPDALKGEVKPVDKTAV 225
Score = 46.3 bits (110), Expect = 8e-06
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPC-VTQIT 59
VTG +G+G +L +G + + + + K + + V
Sbjct: 13 VTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS-- 70
Query: 60 IADAVEGL 67
+ +
Sbjct: 71 -REGFKMA 77
Score = 32.0 bits (73), Expect = 0.37
Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTD---FNPSGQKSKLLSATPEQFARSA 401
V+ +E L + +L PGLV S + P K ++ R A
Sbjct: 172 VRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLA 229
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 115 bits (291), Expect = 6e-30
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 11/196 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG A+ +A G N+ +I R+ + +++ GV+TK D+S
Sbjct: 19 VTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDI 78
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
I+ I L+ N G + P E+ D + ++N+ + V
Sbjct: 79 VTKTIQQIDADLGPISGLIANAGVSVVKPAT--ELTHEDFAFVYDVNVFGVFNTCRAVAK 136
Query: 203 QMKERGR-GAIVNVSS-SSEGQPWPLF------TVYAASKIYIRYFSEALRVEYQKYGIT 254
++ + G+IV SS SS+ Y +SK + L E+ GI
Sbjct: 137 LWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIR 196
Query: 255 VQHIAPAFVSTKMNNF 270
V ++P +V+T
Sbjct: 197 VNALSPGYVNTDQTAH 212
Score = 42.5 bits (101), Expect = 1e-04
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG A+ +A G N+ +I R+ + +++
Sbjct: 19 VTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV 58
Score = 27.5 bits (62), Expect = 6.8
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 347 VKYFTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATP 394
+GL E+ ++G+ LSPG V++ T + S P
Sbjct: 179 CSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIP 226
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 116 bits (292), Expect = 6e-30
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
+TG GIG+A A LA G+ + + RT ++++ A EI G Q + AD+S+
Sbjct: 33 ITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-GGQAIALEADVSDELQ 91
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKL 199
+ A+ + + + I+V N G N + +D++ + W+ I +N+ T + L
Sbjct: 92 MRNAVRDLVLKFGH--LDIVVANAGINGVWAP-IDDLKPFE-WDETIAVNLRGTFLTLHL 147
Query: 200 VLPQMKERGRGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQH 257
+P +K+RG GAIV VSS + P T Y A+K + L +E K+ I V
Sbjct: 148 TVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNA 207
Query: 258 IAPAFVSTKM 267
+ P + T +
Sbjct: 208 VCPGAIETNI 217
Score = 45.3 bits (108), Expect = 1e-05
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG GIG+A A LA G+ + + RT ++++ A EI
Sbjct: 33 ITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEI 72
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 115 bits (290), Expect = 9e-30
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 5/186 (2%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG IG A A LA G I L+ E L+K + GV+ + D++ +A
Sbjct: 12 VTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-KGVEARSYVCDVTSEEA 70
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ + + + I L NN G + + + P D + ++ +N+ + K V
Sbjct: 71 VIGTVDSVVRDFGKIDFLFNNAGYQGAFAP-VQDYPSDD-FARVLTINVTGAFHVLKAVS 128
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
QM + G IVN +S + + P Y SK I +E ++ Y I V I+P
Sbjct: 129 RQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPG 188
Query: 262 FVSTKM 267
++
Sbjct: 189 YMGPGF 194
Score = 44.9 bits (107), Expect = 2e-05
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG IG A A LA G I L+ E L+K +
Sbjct: 12 VTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASV 51
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 115 bits (290), Expect = 1e-29
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 18/193 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + GIG A A LA RGI + +R + + + G + D++
Sbjct: 29 VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR-AAGHDVDGSSCDVTSTDE 87
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ +E IGILVN+ G ++ + LW +++ N+ +T+ VL
Sbjct: 88 VHAAVAAAVERFGPIGILVNSAGR--NGGGETADLDD-ALWADVLDTNLTGVFRVTREVL 144
Query: 202 PQ--MKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGIT 254
M+E G G IVN++S+ Y ASK + F++++ E K GIT
Sbjct: 145 RAGGMREAGWGRIVNIASTGGKQGVMYA-----APYTASKHGVVGFTKSVGFELAKTGIT 199
Query: 255 VQHIAPAFVSTKM 267
V + P +V T M
Sbjct: 200 VNAVCPGYVETPM 212
Score = 47.2 bits (113), Expect = 4e-06
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG A A LA RGI + +R + + +
Sbjct: 29 VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGL 68
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 115 bits (290), Expect = 1e-29
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 16/191 (8%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKK-------TAKEIETTHGVQTKIIAA 136
++G + GIG A A +A G N+ L++++ E K AKEIE G Q I
Sbjct: 14 ISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-GGQALPIVG 72
Query: 137 DMSEG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATT 193
D+ +G AA+ K + G I I VNN A ++E+P + + + + T
Sbjct: 73 DIRDGDAVAAAVAKTVEQFGG--IDICVNNASAINLGS--IEEVPLKRFDLMNGIQVRGT 128
Query: 194 TMLTKLVLPQMKERGRGAIVNVSSSSEGQP-WPLFTVYAASKIYIRYFSEALRVEYQKYG 252
+++ +P MK R I+ +S +P W T Y +K + + + E + G
Sbjct: 129 YAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAG 188
Query: 253 ITVQHIAPAFV 263
I + P
Sbjct: 189 IASNTLWPRTT 199
Score = 38.8 bits (91), Expect = 0.002
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKK-------TAKEI 40
++G + GIG A A +A G N+ L++++ E K AKEI
Sbjct: 14 ISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEI 60
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 114 bits (287), Expect = 2e-29
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 8/186 (4%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG +GIG+A A A G +I + L + I G + + D+S+
Sbjct: 12 ITGGANGIGRAIAERFAVEGADIAIAD--LVPAPEAEAAIRNL-GRRVLTVKCDVSQPGD 68
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
K + ILVNN G + DE+ W +N+ + ++ K +
Sbjct: 69 VEAFGKQVISTFGRCDILVNNAG--IYPLIPFDELTFEQ-WKKTFEINVDSGFLMAKAFV 125
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
P MK G G I+N++S++ +T Y ++K F+ AL + K GITV IAP+
Sbjct: 126 PGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPS 185
Query: 262 FVSTKM 267
V T
Sbjct: 186 LVRTAT 191
Score = 35.9 bits (84), Expect = 0.013
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG +GIG+A A A G +I + L + I
Sbjct: 12 ITGGANGIGRAIAERFAVEGADIAIAD--LVPAPEAEAAI 49
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 113 bits (286), Expect = 2e-29
Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 11/188 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKL-KKTAKEIETTHGVQTKIIAADMSEGK 142
VT G A L + G +V + ++ E E + A + +
Sbjct: 6 VTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-----ALAEQKPE 60
Query: 143 AALDKIKTELEGHTIGILVNNVGANYTY-PMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
+D E I +V+N + L+ E D + +L +
Sbjct: 61 RLVDATLQHGEA--IDTIVSNDYIPRPMNRLPLEGTSEAD-IRQMFEALSIFPILLLQSA 117
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
+ ++ G +++ ++SS +P +Y ++ E+ + GI + I P
Sbjct: 118 IAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGP 177
Query: 261 AFVSTKMN 268
F +
Sbjct: 178 NFFNNPTY 185
Score = 35.9 bits (84), Expect = 0.014
Identities = 8/41 (19%), Positives = 13/41 (31%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKL-KKTAKEI 40
VT G A L + G +V + ++ E
Sbjct: 6 VTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFES 46
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 114 bits (287), Expect = 3e-29
Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 18/197 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETT------HGVQTKIIAAD 137
+TG + GIG A A AR G N+ + +++ K I + G Q + D
Sbjct: 11 ITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCD 70
Query: 138 MSEG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNL-INLNIATT 193
+ E +AA+ G I ILVNN A + + P + ++L +N +
Sbjct: 71 IREEDQVRAAVAATVDTFGG--IDILVNNASAIWLRG--TLDTPMKR-FDLMQQVNARGS 125
Query: 194 TMLTKLVLPQMKERGRGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEALRVEYQKY 251
+ + LP + + I+ ++ W T Y +K+ + + L E+
Sbjct: 126 FVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQ 185
Query: 252 GITVQHIAPA-FVSTKM 267
G+ + + P ++T
Sbjct: 186 GVAINALWPRTVIATDA 202
Score = 37.6 bits (88), Expect = 0.005
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG + GIG A A AR G N+ + +++ K I
Sbjct: 11 ITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTI 50
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 112 bits (283), Expect = 7e-29
Identities = 51/216 (23%), Positives = 94/216 (43%), Gaps = 18/216 (8%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG G G+ A A+ G +V++ R ++ A EI G +AAD+S+
Sbjct: 14 ITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GDAALAVAADISKEAD 69
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
++ L + ILVNN G + P + + + ++ +N+ ++T ++P
Sbjct: 70 VDAAVEAALSKFGKVDILVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYLMTSKLIP 128
Query: 203 QMKERGRGA----IVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
KE G I+NV+S+ G+P P Y A+K ++ ++AL +E I V +
Sbjct: 129 HFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVAL 188
Query: 259 APAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVST 294
P T + +F D+E+ + +
Sbjct: 189 NPVAGETPL--------LTTFMGEDSEEIRKKFRDS 216
Score = 43.3 bits (103), Expect = 6e-05
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG G G+ A A+ G +V++ R ++ A EIG
Sbjct: 14 ITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG 54
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 111 bits (281), Expect = 1e-28
Identities = 37/189 (19%), Positives = 70/189 (37%), Gaps = 9/189 (4%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL---ISRTLEKLKKTAKEIETTHGVQTKIIAADMSE 140
+ G +G A A +N+VL ++ + K E+E G + + +D+S
Sbjct: 16 IAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVALYQSDLSN 74
Query: 141 GKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKL 199
+ + + I +N VG + E E + + +N K
Sbjct: 75 EEEVAKLFDFAEKEFGKVDIAINTVGK--VLKKPIVETSEAEFDAMDTINNKVAYFFIKQ 132
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
M G I+ +++S ++ YA +K + +++ A E K I+V IA
Sbjct: 133 AAKHMNPNGH--IITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIA 190
Query: 260 PAFVSTKMN 268
P + T
Sbjct: 191 PGPMDTSFF 199
Score = 34.8 bits (81), Expect = 0.032
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL---ISRTLEKLKKTAKEI 40
+ G +G A A +N+VL ++ + K E+
Sbjct: 16 IAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDEL 58
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 111 bits (280), Expect = 2e-28
Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 11/187 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VT G A L+ G + + ++ + +
Sbjct: 6 VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-------AFAETYPQLKPMSEQE 58
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ I+ + + +LV+N + +D+ D + + L V
Sbjct: 59 PAELIEAVTSAYGQVDVLVSNDIFAPEFQP-IDKYAVED-YRGAVEALQIRPFALVNAVA 116
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
QMK+R G I+ ++S++ PW + Y +++ + AL E +Y I V I P
Sbjct: 117 SQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPN 176
Query: 262 FVSTKMN 268
++ ++ +
Sbjct: 177 YLHSEDS 183
Score = 42.9 bits (102), Expect = 8e-05
Identities = 8/65 (12%), Positives = 17/65 (26%), Gaps = 2/65 (3%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
VT G A L+ G + + ++ + L + ++ I
Sbjct: 6 VTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETY-PQLKPMSEQEPAEL-I 63
Query: 61 ADAVE 65
Sbjct: 64 EAVTS 68
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 111 bits (280), Expect = 2e-28
Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 5/186 (2%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG+A A + A +V + ++L + +E+ G + + AD+S+ K
Sbjct: 12 VTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-GKEVLGVKADVSKKKD 70
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ ++ E + I +L NN G + E+ + +LW ++ +N+ + ++ V+
Sbjct: 71 VEEFVRRTFETYSRIDVLCNNAGIMDG-VTPVAEVSD-ELWERVLAVNLYSAFYSSRAVI 128
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
P M ++G+G IVN +S + + Y +K + + ++ Y GI + P
Sbjct: 129 PIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPG 188
Query: 262 FVSTKM 267
V T +
Sbjct: 189 TVKTNI 194
Score = 44.4 bits (106), Expect = 3e-05
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG+A A + A +V + ++L + +E+
Sbjct: 12 VTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL 51
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 111 bits (280), Expect = 2e-28
Identities = 41/191 (21%), Positives = 70/191 (36%), Gaps = 14/191 (7%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG T GIG+ A AR G N+ + R+ + +++ + + D+S+
Sbjct: 15 VTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQ 74
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
+E I ++ N G L + L + +N+ T + L
Sbjct: 75 CDALAGRAVEEFGGIDVVCANAG--VFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLD 132
Query: 203 QMKERGRGAIVNVSSSS------EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQ 256
+ G G +V SS + G + Y A+K F +E + ITV
Sbjct: 133 ALIASGSGRVVLTSSITGPITGYPGW-----SHYGATKAAQLGFMRTAAIELAPHKITVN 187
Query: 257 HIAPAFVSTKM 267
I P + T+
Sbjct: 188 AIMPGNIMTEG 198
Score = 42.9 bits (102), Expect = 9e-05
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG T GIG+ A AR G N+ + R+ + ++
Sbjct: 15 VTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL 54
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 111 bits (279), Expect = 3e-28
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI-ETTHGVQTKIIAADMSEGK 142
VTG GIG+A+A L +G + L+ LE + + E +T I D+++ +
Sbjct: 12 VTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQ 71
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
D + ++ + ILVNN G + W + +N+ + T L
Sbjct: 72 QLRDTFRKVVDHFGRLDILVNNAG-----------VNNEKNWEKTLQINLVSVISGTYLG 120
Query: 201 LPQMKERGRG---AIVNVSSSSEGQPWPLFTVYAASKIYIRYF--SEALRVEYQKYGITV 255
L M ++ G I+N+SS + P VY ASK I F S AL G+ +
Sbjct: 121 LDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRL 180
Query: 256 QHIAPAFVSTKM 267
I P FV+T +
Sbjct: 181 NAICPGFVNTAI 192
Score = 43.4 bits (103), Expect = 7e-05
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG+A+A L +G + L+ LE + +
Sbjct: 12 VTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAAL 51
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 110 bits (278), Expect = 5e-28
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 9/187 (4%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG GIG + LAR G +VL L A + G D++ +
Sbjct: 16 ITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GRGAVHHVVDLTNEVS 71
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTML-TKLV 200
I ++ + I+ NN + M + ++ D+W+ +N TML K
Sbjct: 72 VRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTV-DVWDDTFTVNA-RGTMLMCKYA 129
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
+P++ G GAIVN+SS++ + + T YA +K I + + +Y ++G+ IAP
Sbjct: 130 IPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAP 189
Query: 261 AFVSTKM 267
V T
Sbjct: 190 GLVRTPR 196
Score = 42.1 bits (100), Expect = 2e-04
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG GIG + LAR G +VL L A +G
Sbjct: 16 ITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG 56
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 110 bits (278), Expect = 5e-28
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 7/185 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG+A A A+ G +V+ + + A EI G + + D+S K
Sbjct: 32 VTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GSKAFGVRVDVSSAKD 87
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
A ++ + +LVNN G + + IPE ++++N+ + +K V+P
Sbjct: 88 AESMVEKTTAKWGRVDVLVNNAG--FGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIP 145
Query: 203 QMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
M+ G G+I+N +S + T Y ASK I + A+ +++ K GI V +AP
Sbjct: 146 VMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGT 205
Query: 263 VSTKM 267
+ +
Sbjct: 206 IDSPY 210
Score = 43.3 bits (103), Expect = 7e-05
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG+A A A+ G +V+ + + A EIG
Sbjct: 32 VTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG 72
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 110 bits (277), Expect = 5e-28
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 21/199 (10%)
Query: 84 VTGCTD--GIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSE 140
VTG + G+G A A G + + + + ++ KE+E T+G++ K +
Sbjct: 25 VTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDS 84
Query: 141 GKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
++ +K + I + N GA + LD E WN ++ +++ T K
Sbjct: 85 YESCEKLVKDVVADFGQIDAFIANAGATADSGI-LDGSVEA--WNHVVQVDLNGTFHCAK 141
Query: 199 LVLPQMKERGRGAIVNVSSSS-------EGQPWPLFTVYAASKIYIRYFSEALRVEYQKY 251
V KERG G++V +S S + Q T Y +K + + +L E++ +
Sbjct: 142 AVGHHFKERGTGSLVITASMSGHIANFPQEQ-----TSYNVAKAGCIHMARSLANEWRDF 196
Query: 252 GITVQHIAPAFVSTKMNNF 270
V I+P ++ T +++F
Sbjct: 197 -ARVNSISPGYIDTGLSDF 214
Score = 37.9 bits (89), Expect = 0.004
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 1 VTGCTD--GIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG + G+G A A G + + + + ++ KE+
Sbjct: 25 VTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKEL 67
Score = 27.5 bits (62), Expect = 7.1
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 368 LSPGLVSSKMTDFNPSGQKSKLLSATP 394
+SPG + + ++DF P + S P
Sbjct: 202 ISPGYIDTGLSDFVPKETQQLWHSMIP 228
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 110 bits (278), Expect = 6e-28
Identities = 40/205 (19%), Positives = 69/205 (33%), Gaps = 20/205 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+TG IG + A L ++G +V+ + ++ E+ + D+S
Sbjct: 16 ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSS 75
Query: 143 AALDK----IKTELEGH-TIGILVNNVGANYTYPM---------YLDEIPERDLWNLINL 188
+ LD I +LVNN A Y P+ + + + L
Sbjct: 76 SLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGS 135
Query: 189 NIATTTMLTKLVLPQMKERG-----RGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEA 243
N L + + E G ++VN+ + P P F VY +K + + A
Sbjct: 136 NAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRA 195
Query: 244 LRVEYQKYGITVQHIAPAFVSTKMN 268
+E I V +AP
Sbjct: 196 AALELAPRHIRVNAVAPGLSLLPPA 220
Score = 34.9 bits (81), Expect = 0.031
Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
+TG IG + A L ++G +V+ + ++ E+
Sbjct: 16 ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAEL 56
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti}
PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 109 bits (276), Expect = 7e-28
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 22/201 (10%)
Query: 77 KKFTGP--MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKII 134
++ G +VTG GIG+A A LA G +++ E K A I G + + I
Sbjct: 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GKKARAI 57
Query: 135 AADMSEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIAT 192
AAD+S+ + I ILVNN + D++ W +I++N+
Sbjct: 58 AADISDPGSVKALFAEIQALTGGIDILVNNAS--IVPFVAWDDVDLDH-WRKIIDVNLTG 114
Query: 193 TTMLTKLVLPQMKERGR-GAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRV 246
T ++T+ QM+ G+ G +++++S++ Y A+K + F+ AL
Sbjct: 115 TFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNM-----AAYVAAKGGVIGFTRALAT 169
Query: 247 EYQKYGITVQHIAPAFVSTKM 267
E KY IT + P + +
Sbjct: 170 ELGKYNITANAVTPGLIESDG 190
Score = 45.9 bits (110), Expect = 9e-06
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG+A A LA G +++ E K A IG
Sbjct: 11 VTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG 51
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 109 bits (275), Expect = 1e-27
Identities = 36/188 (19%), Positives = 79/188 (42%), Gaps = 7/188 (3%)
Query: 84 VTGCTD-GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VT GIG A G ++V+ +L +T ++ + + + D++ +
Sbjct: 27 VTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTE 86
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLV 200
A I +E + +LVNN G + ++ + + W+ ++N+ + + T+
Sbjct: 87 AVDALITQTVEKAGRLDVLVNNAG--LGGQTPVVDMTDEE-WDRVLNVTLTSVMRATRAA 143
Query: 201 LPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
L + G IVN +S + + YAA+K + + +E ++G+ + ++
Sbjct: 144 LRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVS 203
Query: 260 PAFVSTKM 267
P+ K
Sbjct: 204 PSIARHKF 211
Score = 38.7 bits (91), Expect = 0.002
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1 VTGCTD-GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VT GIG A G ++V+ +L +T ++
Sbjct: 27 VTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA 68
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 109 bits (274), Expect = 1e-27
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 13/189 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS---E 140
V G T G+G A L G ++L R + + +E G + + +D++ E
Sbjct: 13 VIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----GPRVHALRSDIADLNE 68
Query: 141 GKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
L G I +L N G + D++ E +N + +
Sbjct: 69 IAVLGAAAGQTL-GA-IDLLHINAG--VSELEPFDQVSEASYDRQFAVNTKGAFFTVQRL 124
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
P ++E G IV SS ++ P +VY+ASK + F+ L E GI V ++P
Sbjct: 125 TPLIREGGS--IVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSP 182
Query: 261 AFVSTKMNN 269
F+ T
Sbjct: 183 GFIDTPTKG 191
Score = 42.9 bits (102), Expect = 7e-05
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
V G T G+G A L G ++L R + + +E G
Sbjct: 13 VIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG 53
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 109 bits (275), Expect = 2e-27
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 13/214 (6%)
Query: 63 AVEGLYSTKNQGLCKKFTGP--MVTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKT 119
E LY Q + + P +VTG GIG A LA G +I + E +
Sbjct: 14 GTENLY---FQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV 70
Query: 120 AKEIETTHGVQTKIIAADMSEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIP 178
E+ G + + AD+++ + + + I LVNN G ++
Sbjct: 71 IAELS-GLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLK 129
Query: 179 ERDLWN-LINLNIATTTMLTKLVLPQM---KERGRGAIVNVSSSSEGQPWPLFTVYAASK 234
+ ++ ++ +N+ T T+ VL M R +I+N++S S P Y SK
Sbjct: 130 PEN-FDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSK 188
Query: 235 IYIRYFSEALRVEYQKYGITVQHIAPAFVSTKMN 268
+ FS+ L + + GI V + P + + M
Sbjct: 189 AGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMT 222
Score = 38.3 bits (90), Expect = 0.003
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG GIG A LA G +I + E + E+
Sbjct: 34 VTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAEL 74
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 108 bits (272), Expect = 2e-27
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+T GIGQA A AR G ++ KL++ K + D+++ K
Sbjct: 11 LTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGI------QTRVLDVTK-KK 63
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
+D+ E+E + +L N G + + + + E+D +NLN+ + ++ K LP+
Sbjct: 64 QIDQFANEVER--LDVLFNVAG--FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPK 119
Query: 204 MKERGRGAIVNVSS-SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
M + G I+N+SS +S + VY+ +K + ++++ ++ + GI + P
Sbjct: 120 MLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGT 179
Query: 263 VSTKM 267
V T
Sbjct: 180 VDTPS 184
Score = 39.4 bits (93), Expect = 0.001
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+T GIGQA A AR G ++ KL++ K G
Sbjct: 11 LTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG 51
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 110 bits (276), Expect = 2e-27
Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 8/211 (3%)
Query: 84 VTGCTDGIGQAYAHELAR---RGINIVLISRTLEKLK--KTAKEIETTHGVQTKIIAADM 138
+TGC+ GIG A LA + + R L+ A + + D+
Sbjct: 7 ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDV 66
Query: 139 SEGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTK 198
+ K+ + EG + +LV N G L+ + E + +++++N+ T + +
Sbjct: 67 RDSKSVAAARERVTEGR-VDVLVCNAG--LGLLGPLEALGEDAVASVLDVNVVGTVRMLQ 123
Query: 199 LVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
LP MK RG G ++ S P VY ASK + E+L V +G+ + I
Sbjct: 124 AFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLI 183
Query: 259 APAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 289
V T + D + R
Sbjct: 184 ECGPVHTAFMEKVLGSPEEVLDRTDIHTFHR 214
Score = 30.8 bits (70), Expect = 0.88
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 1 VTGCTDGIGQAYAHELAR---RGINIVLISRTLEKLKK 35
+TGC+ GIG A LA + + R L+ +
Sbjct: 7 ITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR 44
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 108 bits (272), Expect = 2e-27
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 12/194 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTL-EKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+TG + GIG A A AR G + L R + +T + G AAD++ +
Sbjct: 12 ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMR-ADGGDAAFFAADLATSE 70
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVL 201
A + + I +L+NN G L EI + +++ NI + M TK L
Sbjct: 71 ACQQLVDEFVAKFGGIDVLINNAGG-LVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFAL 129
Query: 202 PQMKERGR-----GAIVNVSSSSEGQ--PWPLFTVYAASKIYIRYFSEALRVEYQKYGIT 254
P + + A+++ S + G P +Y A+K ++ + + K G+
Sbjct: 130 PHLAAAAKASGQTSAVISTGSIA-GHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVR 188
Query: 255 VQHIAPAFVSTKMN 268
++P V T +
Sbjct: 189 FNIVSPGTVDTAFH 202
Score = 37.9 bits (89), Expect = 0.003
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTL-EKLKKTAKEI 40
+TG + GIG A A AR G + L R + +T +
Sbjct: 12 ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASM 52
Score = 28.3 bits (64), Expect = 4.3
Identities = 7/45 (15%), Positives = 17/45 (37%)
Query: 350 FTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATP 394
+ + G+ F ++SPG V + + ++ + P
Sbjct: 174 VHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIP 218
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 108 bits (273), Expect = 3e-27
Identities = 46/207 (22%), Positives = 73/207 (35%), Gaps = 24/207 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRT-LEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG IG+A A +L + G +V+ E A E+ + AD++
Sbjct: 28 VTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSN 87
Query: 143 AALDK----IKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDL---------WN-LIN 187
I + +LVNN A+ YP L + D LI
Sbjct: 88 VLPASCEEIINSCFRAFGRCDVLVNN--ASAFYPTPLVQGDHEDNSNGKTVETQVAELIG 145
Query: 188 LNIATTTMLTKLVLPQMKE------RGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFS 241
N +LT + K +IVN+ + QP F++Y K + +
Sbjct: 146 TNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLT 205
Query: 242 EALRVEYQKYGITVQHIAPAFVSTKMN 268
++ +E YGI V +AP +
Sbjct: 206 QSAALELAPYGIRVNGVAPGVSLLPVA 232
Score = 37.6 bits (88), Expect = 0.005
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRT-LEKLKKTAKEI 40
VTG IG+A A +L + G +V+ E A E+
Sbjct: 28 VTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADEL 68
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 108 bits (271), Expect = 5e-27
Identities = 56/191 (29%), Positives = 75/191 (39%), Gaps = 19/191 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
VTG GIG A A LA G +++ + A +I G D+S+
Sbjct: 34 VTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVDVSDEQQ 89
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNL---INLNIATTTML- 196
A +D G + LV N G + L + + ++ INL L
Sbjct: 90 IIAMVDACVAAFGG--VDKLVANAG--VVHLASLIDTTV-EDFDRVIAINL---RGAWLC 141
Query: 197 TKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQ 256
TK P+M ERG GAIVN+SS + Y SK I S E + GI
Sbjct: 142 TKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSN 201
Query: 257 HIAPAFVSTKM 267
+ PAFV T M
Sbjct: 202 TLLPAFVDTPM 212
Score = 41.8 bits (99), Expect = 2e-04
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG A A LA G +++ + A +IG
Sbjct: 34 VTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG 74
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 107 bits (269), Expect = 9e-27
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG T GIG A L + G+ + + +R E L+ T KE+ GV+ D+
Sbjct: 27 VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR-EAGVEADGRTCDVRSVPE 85
Query: 144 ALDKIKTELEGH-TIGILVNNVGA---NYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
+ +E + + +LVNN G T + + W ++ N+ +TK
Sbjct: 86 IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL------WLDVVETNLTGVFRVTK 139
Query: 199 LVLPQ--MKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKY 251
VL M ERG G IVN++S+ Y+ASK + F++AL +E +
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGKQGVVHA-----APYSASKHGVVGFTKALGLELART 194
Query: 252 GITVQHIAPAFVSTKM 267
GITV + P FV T M
Sbjct: 195 GITVNAVCPGFVETPM 210
Score = 46.1 bits (110), Expect = 8e-06
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG T GIG A L + G+ + + +R E L+ T KE+
Sbjct: 27 VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL 66
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 107 bits (269), Expect = 9e-27
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 12/221 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + G G+A A G ++ +R E L ++ + + + I+ D+++G+
Sbjct: 10 VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD----DLVAAYPDRAEAISLDVTDGER 65
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
L + + +LVNN G T +E ER+L +L L++ LT+ +LP
Sbjct: 66 IDVVAADVLARYGRVDVLVNNAG--RTQVGAFEETTERELRDLFELHVFGPARLTRALLP 123
Query: 203 QMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
QM+ERG G++VN+SS + F+ Y+A+K + SE L E +GI V + P
Sbjct: 124 QMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGA 183
Query: 263 VSTKMNNFSYRVRNKSFFVPDAEQYARSAVSTLGVTDTSTG 303
T + + ++F + YA T + S G
Sbjct: 184 FRTNLFG-----KGAAYFSEENPAYAEKVGPTRQLVQGSDG 219
Score = 36.5 bits (85), Expect = 0.012
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG + G G+A A G ++ +R E L
Sbjct: 10 VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP 50
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 106 bits (266), Expect = 1e-26
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
+TG G+G A + G +VL E+ TA+E+ G + D++
Sbjct: 10 ITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEED 65
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTML-TKL 199
+ + + E + LVNN G + M+L+ ++ +N+ T + K
Sbjct: 66 WQRVVAYAREEFGS--VDGLVNNAG--ISTGMFLETESVERFRKVVEINL-TGVFIGMKT 120
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
V+P MK+ G G+IVN+SS++ L + Y ASK +R S+ VE I V +
Sbjct: 121 VIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180
Query: 260 PAFVSTKM 267
P T M
Sbjct: 181 PGMTYTPM 188
Score = 40.9 bits (97), Expect = 4e-04
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG G+G A + G +VL E+ TA+E+G
Sbjct: 10 ITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG 50
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 106 bits (267), Expect = 2e-26
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 8/188 (4%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG + GIG A A LA G + L E+ + EIE G + I AD + +
Sbjct: 36 VTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-GGRAVAIRADNRDAE 94
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVL 201
A I+ +E + ILVN+ G ++ P L+E D ++ +N + +
Sbjct: 95 AIEQAIRETVEALGGLDILVNSAGIWHSAP--LEETTVADFDEVMAVNFRAPFVAIRSAS 152
Query: 202 PQMKERGRGAIVNVSSSSEGQ-PWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
+ + GR I+ + S+ PWP ++Y+ASK + ++ L + GITV + P
Sbjct: 153 RHLGDGGR--IITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHP 210
Query: 261 AFVSTKMN 268
T MN
Sbjct: 211 GSTDTDMN 218
Score = 32.1 bits (74), Expect = 0.25
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG + GIG A A LA G + L E+ + EI
Sbjct: 36 VTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI 76
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 107 bits (269), Expect = 2e-26
Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 10/215 (4%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLK----KTAKEIETTHGVQTKIIAADMS 139
+TG + G G+ A LA G + R + + + V + + D+
Sbjct: 10 ITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQ 69
Query: 140 EGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTK 198
+ I + I +L++N G + + L ++N+ +T + +
Sbjct: 70 SQVSVDRAIDQIIGEDGRIDVLIHNAG--HMVFGPAEAFTPEQFAELYDINVLSTQRVNR 127
Query: 199 LVLPQMKERGRGAIVNVSSSSEGQ--PWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQ 256
LP M+ + G ++ +SSSS P Y A+K + + E ++GI
Sbjct: 128 AALPHMRRQKHGLLIWISSSS-SAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETS 186
Query: 257 HIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSA 291
I P ++ N+F++ + +A
Sbjct: 187 IIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNA 221
Score = 33.6 bits (77), Expect = 0.096
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKE 39
+TG + G G+ A LA G + R + + E
Sbjct: 10 ITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVE 48
Score = 27.8 bits (62), Expect = 6.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 6 DGIGQAYAHELARRGINIVLI 26
D I YA EL+R GI +I
Sbjct: 168 DAIAVQYARELSRWGIETSII 188
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 105 bits (265), Expect = 2e-26
Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 20/190 (10%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG+A AR G ++V + R L + + + + AD+S+ KA
Sbjct: 11 VTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVADVSDPKA 66
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
LE + + + G + +P W ++ +N+ + ++ +
Sbjct: 67 VEAVFAEALEEFGRLHGVAHFAGV--AHSALSWNLPLEA-WEKVLRVNLTGSFLVARKAG 123
Query: 202 PQMKERGRGAIVNVSSSS----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQH 257
++E G +V S + G YAA K+ + + L +E + G+ V
Sbjct: 124 EVLEEGGS--LVLTGSVAGLGAFGL-----AHYAAGKLGVVGLARTLALELARKGVRVNV 176
Query: 258 IAPAFVSTKM 267
+ P + T M
Sbjct: 177 LLPGLIQTPM 186
Score = 44.4 bits (106), Expect = 3e-05
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG+A AR G ++V + R L + +
Sbjct: 11 VTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE 51
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 105 bits (265), Expect = 3e-26
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 30/207 (14%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-------------SRTLEKLKKTAKEIETTHGVQ 130
+TG G G+A+A +A G +I+ + + + L +T + +E +
Sbjct: 16 ITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-NRR 74
Query: 131 TKIIAADMSEG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNL-- 185
D + + +D L G + I+V N G P D+I D +
Sbjct: 75 IVAAVVDTRDFDRLRKVVDDGVAAL-GR-LDIIVANAGV--AAPQAWDDITPED-FRDVM 129
Query: 186 -INLNIATTTMLT-KLVLPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSE 242
IN+ T T T P++ E GR G+I+ +SS++ + P Y ASK + +
Sbjct: 130 DINV---TGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLAR 186
Query: 243 ALRVEYQKYGITVQHIAPAFVSTKMNN 269
A E K+ I V + P V+T M +
Sbjct: 187 AFAAELGKHSIRVNSVHPGPVNTPMGS 213
Score = 34.1 bits (79), Expect = 0.074
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 13/53 (24%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-------------SRTLEKLKKTAKEI 40
+TG G G+A+A +A G +I+ + + + L +T + +
Sbjct: 16 ITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 105 bits (264), Expect = 3e-26
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+T T G+G+ +L +G ++ + + +T KE + + + AD+++ +
Sbjct: 12 ITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKED 71
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
++ + I L+NN G L + E + WN +I N+ L KLV+
Sbjct: 72 LHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDE-WNEMIQGNLTAVFHLLKLVV 130
Query: 202 PQMKERGRGAIVNVSSSS-------EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGIT 254
P M+++ G I+N + + +AA+K+ + ++ + E +YGIT
Sbjct: 131 PVMRKQNFGRIINYGFQGADSAPGWIYR-----SAFAAAKVGLVSLTKTVAYEEAEYGIT 185
Query: 255 VQHIAPAFVSTKM 267
+ P + +M
Sbjct: 186 ANMVCPGDIIGEM 198
Score = 36.4 bits (85), Expect = 0.011
Identities = 6/41 (14%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
+T T G+G+ +L +G ++ + ++ +
Sbjct: 12 ITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETY 52
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 105 bits (265), Expect = 4e-26
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 13/187 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS---E 140
+TG T GIG A A G + + R + L EI G I AD + E
Sbjct: 34 ITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GGGAVGIQADSANLAE 89
Query: 141 GKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
+K+K E G I +L N G P L E+ E + + N+ +
Sbjct: 90 LDRLYEKVKAEA-GR-IDVLFVNAGGGSMLP--LGEVTEEQYDDTFDRNVKGVLFTVQKA 145
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
LP + ++V S++ P F+VYAASK +R F+ ++ + GI + ++P
Sbjct: 146 LPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSP 203
Query: 261 AFVSTKM 267
T
Sbjct: 204 GPTETTG 210
Score = 43.7 bits (104), Expect = 5e-05
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG T GIG A A G + + R + L EIG
Sbjct: 34 ITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG 74
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 105 bits (265), Expect = 4e-26
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 8/190 (4%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+VTG + GIG+A A AR G +V+ +R L + EI G + +A D+ +
Sbjct: 12 IVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIA-GGGGEAAALAGDVGDEA 70
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTML-TKL 199
++ + + NN GA + + + W ++ N+ T+ L K
Sbjct: 71 LHEALVELAVRRFGGLDTAFNNAGALGAMGE-ISSLSV-EGWRETLDTNL-TSAFLAAKY 127
Query: 200 VLPQMKERGRGAIVNVSSSS-EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
+P + G G++ SS + YAASK + +AL VE GI V +
Sbjct: 128 QVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNAL 187
Query: 259 APAFVSTKMN 268
P T N
Sbjct: 188 LPGGTDTPAN 197
Score = 42.1 bits (100), Expect = 1e-04
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG+A A AR G +V+ +R L + EI
Sbjct: 13 VTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEI 52
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 105 bits (265), Expect = 4e-26
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 14/191 (7%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG T GIG+ A AR G N+ + +R+ +L E+ + D+S+ +
Sbjct: 46 VTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGS 105
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
D +T ++ + ++ N G LD + L ++++N+ T + L
Sbjct: 106 CADAARTVVDAFGALDVVCANAGI--FPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLA 163
Query: 203 QMKERGRGAIVNVSSSS------EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQ 256
+ GRG ++ SS + G + Y ASK F +E G+TV
Sbjct: 164 PLTASGRGRVILTSSITGPVTGYPGW-----SHYGASKAAQLGFMRTAAIELAPRGVTVN 218
Query: 257 HIAPAFVSTKM 267
I P + T+
Sbjct: 219 AILPGNILTEG 229
Score = 43.0 bits (102), Expect = 1e-04
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG T GIG+ A AR G N+ + +R+ +L E+G
Sbjct: 46 VTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELG 86
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 105 bits (264), Expect = 4e-26
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 17/186 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG A L G + + R + + + D+ E
Sbjct: 33 VTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLH------------LPGDLREAAY 80
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
A G + I+VNN G + E + D W+ + +N+ + + +
Sbjct: 81 ADGLPGAVAAGLGRLDIVVNNAG--VISRGRITETTDAD-WSLSLGVNVEAPFRICRAAI 137
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
P M G GAIVNV+S +P P +Y +K + ++ + +++ GI + + P
Sbjct: 138 PLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPN 197
Query: 262 FVSTKM 267
V+T M
Sbjct: 198 EVNTPM 203
Score = 35.6 bits (83), Expect = 0.021
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTA 37
VTG GIG A L G + + R + +
Sbjct: 33 VTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL 69
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 104 bits (262), Expect = 5e-26
Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 11/191 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG GIG A LAR G ++ I R + ++ T G +T +AA +
Sbjct: 6 ITGSASGIGAALKELLARAGHTVIGIDRGQADI---EADLSTPGGRET-AVAAVLDRCGG 61
Query: 144 ALDK------IKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLT 197
LD + + + VN G + + + + + T
Sbjct: 62 VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121
Query: 198 KLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQH 257
LP ++ G + Q YA SK + + V++ G+ +
Sbjct: 122 AAELPMVEAMLAGDEARAIELA-EQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNV 180
Query: 258 IAPAFVSTKMN 268
+AP V T +
Sbjct: 181 VAPGAVETPLL 191
Score = 37.2 bits (87), Expect = 0.007
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG GIG A LAR G ++ I R ++ G
Sbjct: 6 ITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPG 46
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 104 bits (263), Expect = 7e-26
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 6/184 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG G +V+ + + +E+ + + + K
Sbjct: 14 VTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDV--TQEDDVKT 71
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
+ + G + +VNN G + +E + L+ LN+ T LTKL LP
Sbjct: 72 LVSETIRRF-GR-LDCVVNNAGHHPPPQR-PEETSAQGFRQLLELNLLGTYTLTKLALPY 128
Query: 204 MKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAFV 263
++ + +G ++N+SS Y A+K + ++AL ++ YG+ V I+P +
Sbjct: 129 LR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNI 187
Query: 264 STKM 267
T +
Sbjct: 188 WTPL 191
Score = 40.6 bits (96), Expect = 5e-04
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG G +V+ + + +E+
Sbjct: 14 VTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP 54
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 104 bits (261), Expect = 8e-26
Identities = 28/187 (14%), Positives = 63/187 (33%), Gaps = 13/187 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG + +G A L G +++ RT + E+ V + D S
Sbjct: 32 ITGASQRVGLHCALRLLEHGHRVIISYRTEHA---SVTELRQAGAV---ALYGDFSCETG 85
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ I ++ +V+N + D + + ++++ ++
Sbjct: 86 IMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEA----DNFTRMFSVHMLAPYLINLHCE 141
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
P + IV++S + Y A+K + + + + + V IAPA
Sbjct: 142 PLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPA 200
Query: 262 FVSTKMN 268
+ +
Sbjct: 201 LLMFQPK 207
Score = 34.1 bits (79), Expect = 0.057
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+TG + +G A L G +++ RT + E+
Sbjct: 32 ITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTEL 68
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 104 bits (261), Expect = 9e-26
Identities = 51/197 (25%), Positives = 79/197 (40%), Gaps = 10/197 (5%)
Query: 77 KKFTGP--MVTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKI 133
++FT +V G IG+A A A+ G N+VL + E EIE G
Sbjct: 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE-KLGRSALA 62
Query: 134 IAADMSEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIAT 192
I AD++ I + I LV+ G + E+ E ++++N+ +
Sbjct: 63 IKADLTNAAEVEAAISAAADKFGEIHGLVHVAGG-LIARKTIAEMDEAFWHQVLDVNLTS 121
Query: 193 TTMLTKLVLPQMKERGRGAIVNVSS-SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKY 251
+ K LP+M + G IV SS + P YA SK + F+ L E
Sbjct: 122 LFLTAKTALPKMAKGGA--IVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP- 178
Query: 252 GITVQHIAPAFVSTKMN 268
I V + P +ST +
Sbjct: 179 KIRVNAVCPGMISTTFH 195
Score = 34.4 bits (80), Expect = 0.046
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
V G IG+A A A+ G N+VL + E EI
Sbjct: 13 VAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEI 53
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 104 bits (261), Expect = 1e-25
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG + GIG A A LA G +V+ + ++ A +IE G + AD+S+
Sbjct: 32 VTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-GGKALTAQADVSDPA 90
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVL 201
A T E + +LVNN G + E + +I +N+ T +
Sbjct: 91 AVRRLFATAEEAFGGVDVLVNNAGI--MPLTTIAETGDAVFDRVIAVNLKGTFNTLREAA 148
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
+++ GR I+N+S+S G P + +YAA+K + + L E + ITV +AP
Sbjct: 149 QRLRVGGR--IINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPG 206
Query: 262 FVSTKMN 268
+T +
Sbjct: 207 PTATDLF 213
Score = 33.3 bits (77), Expect = 0.10
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG + GIG A A LA G +V+ + ++ A +I
Sbjct: 32 VTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKI 72
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 103 bits (260), Expect = 1e-25
Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 15/188 (7%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG + GIG R +V SR+++ +A D+S+ +
Sbjct: 33 ITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----------DPDIHTVAGDISKPET 82
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLP 202
A ++ +E I LVNN G E+ + D + + +N+A +T+
Sbjct: 83 ADRIVREGIERFGRIDSLVNNAG--VFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAA 140
Query: 203 QMKERGRGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
+M ++G G IV++++S + + + +K + + +L +E+ + G+ V ++P
Sbjct: 141 EMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSP 200
Query: 261 AFVSTKMN 268
+ T M+
Sbjct: 201 GVIKTPMH 208
Score = 37.2 bits (87), Expect = 0.006
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEK 32
+TG + GIG R +V SR+++
Sbjct: 33 ITGASQGIGAGLVRAYRDRNYRVVATSRSIKP 64
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 103 bits (259), Expect = 2e-25
Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 16/186 (8%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG A A G + + + D+++
Sbjct: 12 VTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----------QYPFATEVMDVADAAQ 60
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ L + LVN G D++ + D W +N+ L + +
Sbjct: 61 VAQVCQRLLAETERLDALVNAAG--ILRMGATDQLSKED-WQQTFAVNVGGAFNLFQQTM 117
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
Q + + GAIV V+S + P + Y ASK ++ + ++ +E G+ ++P
Sbjct: 118 NQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPG 177
Query: 262 FVSTKM 267
T M
Sbjct: 178 STDTDM 183
Score = 35.2 bits (82), Expect = 0.030
Identities = 9/40 (22%), Positives = 13/40 (32%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG A A G + + + +
Sbjct: 12 VTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATE 51
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 104 bits (262), Expect = 2e-25
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 25/227 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI------------SRTLEKLKKTAKEIETTHGVQT 131
+TG G G+ +A LA+ G +IV I + E+LK+T + +E G +
Sbjct: 51 ITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-GRRI 109
Query: 132 KIIAADMSEG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LIN 187
AD+ + +A +D+ E GH I ILV+NVG + + + ++ W+ ++
Sbjct: 110 IARQADVRDLASLQAVVDEALAEF-GH-IDILVSNVGI--SNQGEVVSLTDQQ-WSDILQ 164
Query: 188 LNIATTTMLTKLVLPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRV 246
N+ + VLP M ERG+ G+++ VSS+ + P + YAASK ++ +L
Sbjct: 165 TNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLAN 224
Query: 247 EYQKYGITVQHIAPAFVSTKM--NNFSYRVRNKSFFVPDAEQYARSA 291
E ++ I V + P V+T+M N ++ P E A
Sbjct: 225 EVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELF 271
Score = 38.0 bits (89), Expect = 0.004
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 12/52 (23%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI------------SRTLEKLKKTAKEI 40
+TG G G+ +A LA+ G +IV I + E+LK+T + +
Sbjct: 51 ITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 102 bits (258), Expect = 2e-25
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
+TG T GIG A A + G +++ R + +K AK + T Q + D S+
Sbjct: 11 ITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDG 68
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTML-TK 198
D + + LVNN G ++E + W L+ +N+ T+
Sbjct: 69 WTKLFDATEKAFGP--VSTLVNNAGIAVNKS--VEETTTAE-WRKLLAVNL-DGVFFGTR 122
Query: 199 LVLPQMKERGRG-AIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEY--QKYGITV 255
L + +MK +G G +I+N+SS P Y ASK +R S++ ++ + Y + V
Sbjct: 123 LGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRV 182
Query: 256 QHIAPAFVSTKM 267
+ P ++ T +
Sbjct: 183 NTVHPGYIKTPL 194
Score = 40.2 bits (95), Expect = 7e-04
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG T GIG A A + G +++ R + +K AK +G
Sbjct: 11 ITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG 51
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 103 bits (258), Expect = 3e-25
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 7/189 (3%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETT-HGVQTKIIAADMSEG 141
++TG G+G+A A LA G + L+ + E L+ + + T + AD+S+
Sbjct: 17 LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 76
Query: 142 KAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTML-TK 198
+ E I NN G + ++ ++++N+ L +
Sbjct: 77 AQVEAYVTATTERFGRIDGFFNNAGIEGKQNP-TESFTA-AEFDKVVSINL-RGVFLGLE 133
Query: 199 LVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
VL M+E+G G +VN +S + + YAA+K + + VEY +YGI + I
Sbjct: 134 KVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAI 193
Query: 259 APAFVSTKM 267
AP + T M
Sbjct: 194 APGAIWTPM 202
Score = 42.9 bits (102), Expect = 1e-04
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG G+G+A A LA G + L+ + E L+ + +
Sbjct: 18 ITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVL 58
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 103 bits (258), Expect = 3e-25
Identities = 42/221 (19%), Positives = 87/221 (39%), Gaps = 15/221 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMS--- 139
VTG GIG+ A EL RRG +++ + + E ++ I+ G + A++
Sbjct: 34 VTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANVGVVE 92
Query: 140 EGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKL 199
+ ++ + I+ +N G + ++ + + +N + +
Sbjct: 93 DIVRMFEEAVKIFGK--LDIVCSNSGVVSFGH--VKDVTPEEFDRVFTINTRGQFFVARE 148
Query: 200 VLPQMKERGRGAIVNVSSS-SEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
++ GR ++ + S + + P VY+ SK I F+ + ++ ITV +
Sbjct: 149 AYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVV 206
Query: 259 APAFVSTKMN---NFSYRVRNKSFFVPDAEQYARSAVSTLG 296
AP + T M Y ++ + ++YA S L
Sbjct: 207 APGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR 247
Score = 31.8 bits (73), Expect = 0.30
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG GIG+ A EL RRG +++ + + E ++ I
Sbjct: 34 VTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAI 74
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 102 bits (256), Expect = 4e-25
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 12/186 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG+A A AR G + L E K+ A+ I D+ + +
Sbjct: 11 VTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG------AFFQVDLEDERE 63
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
+ ++ + +LVNN P + + W ++ +N+ L+ L
Sbjct: 64 RVRFVEEAAYALGRVDVLVNNAA--IAAPGSALTVRLPE-WRRVLEVNLTAPMHLSALAA 120
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
+M++ G GAIVNV+S Y ASK + + +L ++ I V +AP
Sbjct: 121 REMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPG 180
Query: 262 FVSTKM 267
++T+
Sbjct: 181 AIATEA 186
Score = 35.5 bits (83), Expect = 0.020
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG+A A AR G + L E K+ A+ IG
Sbjct: 11 VTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG 50
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 101 bits (254), Expect = 5e-25
Identities = 26/187 (13%), Positives = 57/187 (30%), Gaps = 13/187 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
V G +G R + I + E + V K+ + +
Sbjct: 12 VYGGRGALGSRCVQAFRARNWWVASIDV--------VENEEASASVIVKMTDSFTEQADQ 63
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
++ L + ++ G + ++ + +I T+T+ + L
Sbjct: 64 VTAEVGKLLGDQKVDAILCVAGGWAGGNA-KSKSLFKNCDLMWKQSIWTSTISSHLATKH 122
Query: 204 MKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEY--QKYGITVQHIAPA 261
+KE G + + + P Y +K + ++L + G + P
Sbjct: 123 LKEGGL--LTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPV 180
Query: 262 FVSTKMN 268
+ T MN
Sbjct: 181 TLDTPMN 187
Score = 28.8 bits (65), Expect = 2.7
Identities = 5/26 (19%), Positives = 7/26 (26%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI 26
V G +G R + I
Sbjct: 12 VYGGRGALGSRCVQAFRARNWWVASI 37
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 101 bits (255), Expect = 6e-25
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
V+G G+G ++ + G +V E+ K A E+ + + D+++
Sbjct: 12 VSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL----ADAARYVHLDVTQPAQ 67
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTML-TKL 199
KAA+D T G + +LVNN G +++ + ++++N+ T L +
Sbjct: 68 WKAAVDTAVTAFGG--LHVLVNNAG--ILNIGTIEDYALTEWQRILDVNL-TGVFLGIRA 122
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
V+ MKE GRG+I+N+SS Y A+K +R +++ +E GI V I
Sbjct: 123 VVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIH 182
Query: 260 PAFVSTKM 267
P V T M
Sbjct: 183 PGLVKTPM 190
Score = 38.7 bits (91), Expect = 0.002
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
V+G G+G ++ + G +V E+ K A E+
Sbjct: 12 VSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA 52
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 101 bits (254), Expect = 6e-25
Identities = 28/187 (14%), Positives = 58/187 (31%), Gaps = 17/187 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
V G + +G + N + I + I+ + E K+
Sbjct: 27 VLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDS----------GEEEIKS 76
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
++KI ++ + V G + + + +I++N+ + +
Sbjct: 77 VIEKINSKSIK--VDTFVCAAGGWSGGNA-SSDEFLKSVKGMIDMNLYSAFASAHIGAKL 133
Query: 204 MKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEY--QKYGITVQHIAPA 261
+ + G V +S+ Y A+K + + L E G T I P
Sbjct: 134 LNQGGL--FVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPV 191
Query: 262 FVSTKMN 268
+ T N
Sbjct: 192 TLDTPTN 198
Score = 33.8 bits (78), Expect = 0.076
Identities = 5/37 (13%), Positives = 10/37 (27%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTA 37
V G + +G + N + I +
Sbjct: 27 VLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS 63
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 101 bits (254), Expect = 7e-25
Identities = 37/207 (17%), Positives = 72/207 (34%), Gaps = 17/207 (8%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + GIG+A L + + V+ + K I AD+++ +
Sbjct: 9 VTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----------AENLKFIKADLTKQQD 58
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVLP 202
+ + + N G + +I +++LN+ ++ K +
Sbjct: 59 ITNVLDIIKNVS-FDGIFLNAG--ILIKGSIFDIDIES-IKKVLDLNVWSSIYFIKGLEN 114
Query: 203 QMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAF 262
+K +IV S P Y SK I +++L ++ KY I V + P
Sbjct: 115 NLK--VGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGT 172
Query: 263 VSTKMNNFSYRVRNKSFFVPDAEQYAR 289
V T + + + + E +
Sbjct: 173 VDTDLYRNLIQKYANNVGISFDEAQKQ 199
Score = 33.7 bits (78), Expect = 0.072
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKL-KKTAKEI 40
VTG + GIG+A L + + V+ + + K I
Sbjct: 9 VTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFI 49
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 102 bits (257), Expect = 8e-25
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI------------SRTLEKLKKTAKEIETTHGVQT 131
+TG G G+++A LAR G +I+ I T + L +T +++E G +
Sbjct: 33 ITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-GRRI 91
Query: 132 KIIAADMSEG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LIN 187
D+ + +AA+D T+L G + I++ N + L+ + + W +I+
Sbjct: 92 IASQVDVRDFDAMQAAVDDGVTQL-GR-LDIVLANAALA-SEGTRLNRMDPKT-WRDMID 147
Query: 188 LNIATTTMLT-KLVLPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALR 245
+N+ +T ++ +P + R G+IV SS + Y ASK + +
Sbjct: 148 VNL-NGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMA 206
Query: 246 VEYQKYGITVQHIAPAFVSTKM--NNFSYRVRNKSFFVPDAEQYA 288
+E I V + P+ V+T M N +YR+ P E +
Sbjct: 207 LELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQ 251
Score = 35.3 bits (82), Expect = 0.026
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 12/52 (23%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI------------SRTLEKLKKTAKEI 40
+TG G G+++A LAR G +I+ I T + L +T +++
Sbjct: 33 ITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 101 bits (254), Expect = 8e-25
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 13/193 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMS--- 139
VTG + GIG+A A LA G + + E+ ++T EI++ G I A++
Sbjct: 12 VTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANLESLH 70
Query: 140 EGKAALDKIKTELEGHTIG----ILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTM 195
+A + EL+ T IL+NN G ++E E+ ++++N
Sbjct: 71 GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAF--IEETTEQFFDRMVSVNAKAPFF 128
Query: 196 LTKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITV 255
+ + L ++++ R I+N+SS++ P F Y+ +K I + L + GITV
Sbjct: 129 IIQQALSRLRDNSR--IINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITV 186
Query: 256 QHIAPAFVSTKMN 268
I P FV T MN
Sbjct: 187 NAILPGFVKTDMN 199
Score = 32.5 bits (75), Expect = 0.20
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL 25
VTG + GIG+A A LA G + +
Sbjct: 12 VTGASRGIGRAIAKRLANDGALVAI 36
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 102 bits (256), Expect = 8e-25
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-------------SRTLEKLKKTAKEIETTHGVQ 130
+TG G G+++A LA G +I+ + E L +TA+ +E G +
Sbjct: 20 ITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-GRK 78
Query: 131 TKIIAADMSEG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNL-- 185
D+ + + + + G + ++V N G + E+ + W+
Sbjct: 79 ALTRVLDVRDDAALRELVADGMEQF-GR-LDVVVANAG--VLSWGRVWELTDEQ-WDTVI 133
Query: 186 -INLNIATTTMLT-KLVLPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSE 242
+NL T T T + +P M E G G+IV VSSS+ + P Y+ASK + +
Sbjct: 134 GVNL---TGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190
Query: 243 ALRVEYQKYGITVQHIAPAFVSTKM 267
L +E +YGI V I P V T M
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPM 215
Score = 35.2 bits (82), Expect = 0.029
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 13/53 (24%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-------------SRTLEKLKKTAKEI 40
+TG G G+++A LA G +I+ + E L +TA+ +
Sbjct: 20 ITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 101 bits (255), Expect = 1e-24
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 38/202 (18%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG+ A LA+ +++ ISRT + EI+ + G ++ A D+S+ +
Sbjct: 49 VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK-SFGYESSGYAGDVSKKEE 107
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNL------------INLNI 190
+ I L H + ILVNN G RD NL + N+
Sbjct: 108 ISEVINKILTEHKNVDILVNNAGIT------------RD--NLFLRMKNDEWEDVLRTNL 153
Query: 191 ATTTMLTKLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALR 245
+ +T+ + +M G I+N+SS GQ Y++SK + F+++L
Sbjct: 154 NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ-----ANYSSSKAGVIGFTKSLA 208
Query: 246 VEYQKYGITVQHIAPAFVSTKM 267
E ITV IAP F+S+ M
Sbjct: 209 KELASRNITVNAIAPGFISSDM 230
Score = 45.6 bits (109), Expect = 1e-05
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG GIG+ A LA+ +++ ISRT + EI
Sbjct: 49 VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI 88
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 101 bits (253), Expect = 2e-24
Identities = 53/215 (24%), Positives = 83/215 (38%), Gaps = 12/215 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMS--- 139
VTG GIG A A L R G +V+ + + + +K EI+ G I AD+
Sbjct: 23 VTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GSDAIAIKADIRQVP 81
Query: 140 EGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKL 199
E D+ + I V+N G L ++ E + + +LN + +
Sbjct: 82 EIVKLFDQAVAHFGH--LDIAVSNSGVVSFGH--LKDVTEEEFDRVFSLNTRGQFFVARE 137
Query: 200 VLPQMKERGRGAIVNVSSS-SEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
+ E GR IV SS+ S+ P ++Y+ SK + F + ITV +
Sbjct: 138 AYRHLTEGGR--IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAV 195
Query: 259 APAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVS 293
AP T M + + AEQ + A
Sbjct: 196 APGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAH 230
Score = 31.8 bits (73), Expect = 0.30
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG GIG A A L R G +V+ + + + +K EI
Sbjct: 23 VTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI 63
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 101 bits (254), Expect = 2e-24
Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 38/233 (16%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI----------------SRTLEKLKKTAKEIETTH 127
VTG G G+++A LA+ G +I+ + + T E L +TA ++ +
Sbjct: 16 VTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN 75
Query: 128 GVQTKIIAA-----DMSEGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDL 182
+I+ A D KAA+D +L G + I+V N G LD+ E D
Sbjct: 76 R---RIVTAEVDVRDYDALKAAVDSGVEQL-GR-LDIIVANAGIGNGGDT-LDKTSEED- 128
Query: 183 WNL---INLNIATTTMLT-KLVLPQMKERGR-GAIVNVSSSSEGQPWPLFTVYAASKIYI 237
W INL T K +P M GR G+I+ SS + +P Y A+K +
Sbjct: 129 WTEMIDINL---AGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGV 185
Query: 238 RYFSEALRVEYQKYGITVQHIAPAFVSTKM--NNFSYRVRNKSFFVPDAEQYA 288
A VE ++ I V + P V T M N ++++ P + A
Sbjct: 186 VGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA 238
Score = 32.6 bits (75), Expect = 0.22
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 16/56 (28%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI----------------SRTLEKLKKTAKEI 40
VTG G G+++A LA+ G +I+ + + T E L +TA +
Sbjct: 16 VTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLV 71
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 100 bits (250), Expect = 2e-24
Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 13/187 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
V G +G A + G ++ I + + ++ + ++
Sbjct: 8 VYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGN--------KNWTEQEQS 59
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
L++ + L+G + + G + ++ +I ++ ++ + KL
Sbjct: 60 ILEQTASSLQGSQVDGVFCVAGGWAGGSA-SSKDFVKNADLMIKQSVWSSAIAAKLATTH 118
Query: 204 MKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEY--QKYGITVQHIAPA 261
+K G + +++ P P Y +K + + + +L + V I P
Sbjct: 119 LKPGGL--LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPV 176
Query: 262 FVSTKMN 268
+ T MN
Sbjct: 177 TLDTPMN 183
Score = 28.8 bits (65), Expect = 3.0
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI 26
V G +G A + G ++ I
Sbjct: 8 VYGGKGALGSAILEFFKKNGYTVLNI 33
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 100 bits (251), Expect = 2e-24
Identities = 38/190 (20%), Positives = 75/190 (39%), Gaps = 20/190 (10%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG+ + G + I ++ AKE + AD K
Sbjct: 7 VTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDV--ADPLTLKK 64
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVLP 202
++ +L+ I +LVNN L + + ++ ++++ + L++L
Sbjct: 65 FVEYAMEKLQR--IDVLVNNAC--RGSKGILSSLLYEE-FDYILSVGLKAPYELSRLCRD 119
Query: 203 QMKERGRGAIVNVSS-----SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQH 257
++ + +G I+N++S S YA++K I + AL + + V
Sbjct: 120 ELIKN-KGRIINIASTRAFQSEPDS-----EAYASAKGGIVALTHALAMSLGP-DVLVNC 172
Query: 258 IAPAFVSTKM 267
IAP +++
Sbjct: 173 IAPGWINVTE 182
Score = 40.2 bits (95), Expect = 6e-04
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG GIG+ + G + I ++ AKE
Sbjct: 7 VTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERP 47
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 101 bits (253), Expect = 2e-24
Identities = 56/225 (24%), Positives = 91/225 (40%), Gaps = 29/225 (12%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISR------------TLEKLKKTAKEIETTHGVQT 131
+TG G+G+++A LA G +I + R T + L +T +E T G +
Sbjct: 15 ITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-GRRC 73
Query: 132 KIIAADMSEG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LIN 187
D+ + ++ + + + L G I I + N G + L E+ W+ +I
Sbjct: 74 ISAKVDVKDRAALESFVAEAEDTL-GG-IDIAITNAGI--STIALLPEVESAQ-WDEVIG 128
Query: 188 LNIATTTMLTKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVE 247
N+ T V P M +R G IV VSS Y +SK + ++ +
Sbjct: 129 TNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHD 188
Query: 248 YQKYGITVQHIAPAFVSTKM--NNFSYRVRNKSFFVPDAEQYARS 290
YGITV +AP + T M N+F + PD E+
Sbjct: 189 LVGYGITVNAVAPGNIETPMTHNDFVFGT-----MRPDLEKPTLK 228
Score = 35.6 bits (83), Expect = 0.021
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 12/52 (23%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISR------------TLEKLKKTAKEI 40
+TG G+G+++A LA G +I + R T + L +T +
Sbjct: 15 ITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein,
NAD(P)-binding rossmann fold, csgid, oxidoreductase;
1.95A {Francisella tularensis subsp}
Length = 247
Score = 99.5 bits (249), Expect = 3e-24
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + GIG AH LA +G +V + + +K ++ G + + + ++S+ ++
Sbjct: 10 VTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK-EKGFKARGLVLNISDIES 68
Query: 144 ALDKIKTELEGH-TIGILVNNVGA---NYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
+ + I ILVNN G N M DE W +IN N+++ ++K
Sbjct: 69 IQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDE------WQSVINTNLSSIFRMSK 122
Query: 199 LVLPQM-KERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYG 252
+ M K+R G I+++ S GQ T Y A+K + FS++L E
Sbjct: 123 ECVRGMMKKRW-GRIISIGSVVGSAGNPGQ-----TNYCAAKAGVIGFSKSLAYEVASRN 176
Query: 253 ITVQHIAPAFVSTKM 267
ITV +AP F++T M
Sbjct: 177 ITVNVVAPGFIATDM 191
Score = 44.8 bits (107), Expect = 2e-05
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG AH LA +G +V + + +K +
Sbjct: 10 VTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSM 49
Score = 27.5 bits (62), Expect = 7.6
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 350 FTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATP 394
F++ L E + +T +++PG +++ MTD QKS + + P
Sbjct: 164 FSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIP 208
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 99.5 bits (249), Expect = 3e-24
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG GIG+A A+ G +V L++ A+ + H V + AD + +
Sbjct: 10 ITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG-AHPVVMDV--ADPASVER 66
Query: 144 ALDKIKTELEGHTIGILVNNVGA---NYTYPMYLDEIPERDLWNL-INLNIATTTMLTKL 199
+ L + +V+ G N+ + M L++ W L + +N+ + ++ K
Sbjct: 67 GFAEALAHLGR--LDGVVHYAGITRDNFHWKMPLED------WELVLRVNLTGSFLVAKA 118
Query: 200 VLPQMKERGRGAIVNVSSSS----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITV 255
M+E+ G+IV +S GQ YAAS + + L +E ++GI V
Sbjct: 119 ASEAMREKNPGSIVLTASRVYLGNLGQ-----ANYAASMAGVVGLTRTLALELGRWGIRV 173
Query: 256 QHIAPAFVSTKM 267
+AP F+ T+M
Sbjct: 174 NTLAPGFIETRM 185
Score = 46.0 bits (110), Expect = 8e-06
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
+TG GIG+A A+ G +V L++ A+ +G + + +++ V +
Sbjct: 10 ITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERG-F 68
Query: 61 ADAVE 65
A+A+
Sbjct: 69 AEALA 73
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 99 bits (250), Expect = 4e-24
Identities = 48/191 (25%), Positives = 75/191 (39%), Gaps = 8/191 (4%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG + GIG A AR+G + + + E I + G + I D+
Sbjct: 31 VTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGEAVAIPGDVGNAA 89
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVL 201
+ LVNN G YP +DE+ + ++ +N+ + + +
Sbjct: 90 DIAAMFSAVDRQFGRLDGLVNNAGI-VDYPQRVDEMSVERIERMLRVNVTGSILCAAEAV 148
Query: 202 PQMKERGR---GAIVNVSSSSEGQPWP-LFTVYAASKIYIRYFSEALRVEYQKYGITVQH 257
+M GAIVNVSS + + YAASK I F+ L E GI V
Sbjct: 149 RRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNA 208
Query: 258 IAPAFVSTKMN 268
+ P + T ++
Sbjct: 209 VRPGIIETDLH 219
Score = 31.4 bits (72), Expect = 0.45
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEI 40
VTG + GIG A AR+G + + + E I
Sbjct: 31 VTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAI 71
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 99 bits (250), Expect = 4e-24
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMS--- 139
TG GIG+ A EL RRG ++V+ + + ++ E++ G Q I AD+S
Sbjct: 26 TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADISKPS 84
Query: 140 EGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKL 199
E A DK + G + +++N G E+ + + NLN + +
Sbjct: 85 EVVALFDKAVSHFGG--LDFVMSNSGMEVWCD--ELEVTQELFDKVFNLNTRGQFFVAQQ 140
Query: 200 VLPQMKERGRGAIVNVSS-SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHI 258
L + GR I+ SS ++ P +YA SK + F A V+ G+TV I
Sbjct: 141 GLKHCRRGGR--IILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCI 198
Query: 259 APAFVSTKMN 268
AP V T M
Sbjct: 199 APGGVKTDMF 208
Score = 32.6 bits (75), Expect = 0.19
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
TG GIG+ A EL RRG ++V+ + + ++ E+
Sbjct: 26 TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL 66
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 99.5 bits (249), Expect = 5e-24
Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 19/187 (10%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + GIG A L R G +V +S + + + D++ +
Sbjct: 19 VTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK-----------IDVTNEEE 67
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTML-TKLV 200
+ ++ + + I ILVNN G P L P ++W +I++N+ + L K
Sbjct: 68 VKEAVEKTTKKYGRIDILVNNAGIEQYSP--LHLTPT-EIWRRIIDVNV-NGSYLMAKYT 123
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
+P M G G+I+N++S Y SK + + ++ ++Y I + P
Sbjct: 124 IPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCP 182
Query: 261 AFVSTKM 267
+ T M
Sbjct: 183 GTIMTPM 189
Score = 41.8 bits (99), Expect = 2e-04
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG A L R G +V +S + +
Sbjct: 19 VTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF 58
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 99.1 bits (248), Expect = 5e-24
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 23/195 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG T GIG+A A +LA G +++ + E+ K A+EI +GV+ + ++ ++
Sbjct: 12 VTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEES 71
Query: 144 ALDKIKTELEGH-TIGILVNNVGA---NYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
+ I ILVNN G M L + W ++ +N+ T ++T+
Sbjct: 72 INKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLD------WEEVLKVNLTGTFLVTQ 125
Query: 199 LVLPQM-KERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYG 252
L +M K+R G IVN+SS GQ Y+ +K + F+++L E
Sbjct: 126 NSLRKMIKQRW-GRIVNISSVVGFTGNVGQ-----VNYSTTKAGLIGFTKSLAKELAPRN 179
Query: 253 ITVQHIAPAFVSTKM 267
+ V +AP F+ T M
Sbjct: 180 VLVNAVAPGFIETDM 194
Score = 40.9 bits (97), Expect = 3e-04
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG T GIG+A A +LA G +++ + E+ K A+EI
Sbjct: 12 VTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEI 51
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 99.6 bits (249), Expect = 6e-24
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 33/228 (14%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI------------SRTLEKLKKTAKEIETTHGVQT 131
+TG G G+A+A LA G +I+ + T E+L T K +E G +
Sbjct: 18 ITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-GSRI 76
Query: 132 KIIAADMSEG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWN-LIN 187
AD+ + AAL EL G + I+V N G PM + D W+ +I+
Sbjct: 77 VARQADVRDRESLSAALQAGLDEL-GR-LDIVVANAG---IAPMSAGD----DGWHDVID 127
Query: 188 LNIATTTMLT-KLVLPQMKERGR-GAIVNVSSSS----EGQPWPLFTVYAASKIYIRYFS 241
+N+ T T K+ +P + ++G G+IV +SSS+ G P Y A+K +
Sbjct: 128 VNL-TGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLM 186
Query: 242 EALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 289
I V I P+ V T M N + + +
Sbjct: 187 RVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGA 234
Score = 36.0 bits (84), Expect = 0.018
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 12/52 (23%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI------------SRTLEKLKKTAKEI 40
+TG G G+A+A LA G +I+ + T E+L T K +
Sbjct: 18 ITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 98.4 bits (246), Expect = 1e-23
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 22/194 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + GIG+A A ELARRG ++ + T + + G++ + ++++ A
Sbjct: 33 VTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK-QAGLEGRGAVLNVNDATA 91
Query: 144 ALDKIKTELEGH-TIGILVNNVGA---NYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
+++ L+ + +LVNN G M DE W+ +I+ N+ L++
Sbjct: 92 VDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDE------WDAVIDTNLKAVFRLSR 145
Query: 199 LVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGI 253
VL M + G IVN++S GQ YAA+K + + AL E GI
Sbjct: 146 AVLRPMMKARGGRIVNITSVVGSAGNPGQ-----VNYAAAKAGVAGMTRALAREIGSRGI 200
Query: 254 TVQHIAPAFVSTKM 267
TV +AP F+ T M
Sbjct: 201 TVNCVAPGFIDTDM 214
Score = 44.8 bits (107), Expect = 2e-05
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG+A A ELARRG ++ + T +
Sbjct: 33 VTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAF 72
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 98.0 bits (245), Expect = 1e-23
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 23/199 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIE------TTHGVQTKIIAAD 137
VTG GIG+A + LA G + ++T + + AD
Sbjct: 12 VTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQAD 71
Query: 138 MSEGKAALDKIKTELE--GHTIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTT 194
+SE +AA ++ ++V+ G T +L + E D W+ +I +N+ T
Sbjct: 72 VSEARAARCLLEQVQACFSRPPSVVVSCAGI--TQDEFLLHMSEDD-WDKVIAVNLKGTF 128
Query: 195 MLTKLVLPQM-KERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEY 248
++T+ + RG+I+N+SS GQ T YAASK + ++ E
Sbjct: 129 LVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ-----TNYAASKAGVIGLTQTAAREL 183
Query: 249 QKYGITVQHIAPAFVSTKM 267
++GI + P F++T M
Sbjct: 184 GRHGIRCNSVLPGFIATPM 202
Score = 45.2 bits (108), Expect = 2e-05
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI---GMINISLIISNFPCVTQ 57
VTG GIG+A + LA G + ++T + + G ++
Sbjct: 12 VTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQAD 71
Query: 58 ITIADAVEGL 67
++ A A L
Sbjct: 72 VSEARAARCL 81
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 97.5 bits (244), Expect = 1e-23
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 39/203 (19%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG + G+G+A A +L G NIVL S L TA+E + G+ + D+ +
Sbjct: 10 VTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFK-AAGINVVVAKGDVKNPE 68
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNL------------INLN 189
+ +KT ++ I ILVNN G RD L +N N
Sbjct: 69 DVENMVKTAMDAFGRIDILVNNAGIT------------RD--TLMLKMSEKDWDDVLNTN 114
Query: 190 IATTTMLTKLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEAL 244
+ + + TK V M ++ G I+N++S + GQ YAASK + F++++
Sbjct: 115 LKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQ-----ANYAASKAGLIGFTKSI 169
Query: 245 RVEYQKYGITVQHIAPAFVSTKM 267
E+ GI +AP + T M
Sbjct: 170 AKEFAAKGIYCNAVAPGIIKTDM 192
Score = 40.2 bits (95), Expect = 7e-04
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG + G+G+A A +L G NIVL S L TA+E
Sbjct: 10 VTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEF 50
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 98.1 bits (245), Expect = 2e-23
Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 10/188 (5%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG G+G+A G + ++ ++ E+L++ G + D+ +
Sbjct: 10 ITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GGNAVGVVGDVRSLQD 65
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDL--WN-LINLNIATTTMLTKL 199
+ L I L+ N G D ++ ++ + ++N+ K
Sbjct: 66 QKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKA 125
Query: 200 VLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIA 259
LP + G++V S++ P +Y A+K + + E + V +A
Sbjct: 126 CLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRVNGVA 183
Query: 260 PAFVSTKM 267
P ++T +
Sbjct: 184 PGGMNTDL 191
Score = 41.1 bits (97), Expect = 4e-04
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG G+G+A G + ++ ++ E+L++ G
Sbjct: 10 ITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG 50
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 97.8 bits (244), Expect = 3e-23
Identities = 37/221 (16%), Positives = 64/221 (28%), Gaps = 41/221 (18%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG +G++ A L G + L R+ + + + + AD+S
Sbjct: 14 VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 73
Query: 143 AALDKIKTELEGHT------------------IGILVNNVGANYTYPMYLDEIPERD--- 181
A T +LVNN + YP L E
Sbjct: 74 TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASS--FYPTPLLRNDEDGHEP 131
Query: 182 -----------LWNLINLNIATTTMLTKLVLPQM------KERGRGAIVNVSSSSEGQPW 224
+L N L K ++ +I+N+ + QP
Sbjct: 132 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 191
Query: 225 PLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAFVST 265
+T+Y +K + + + +E I V + P
Sbjct: 192 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 232
Score = 35.4 bits (82), Expect = 0.023
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG +G++ A L G + L R+ + + +
Sbjct: 14 VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL 54
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 97.9 bits (244), Expect = 5e-23
Identities = 37/217 (17%), Positives = 65/217 (29%), Gaps = 37/217 (17%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG +G++ A L G + L R+ + + + + AD+S
Sbjct: 51 VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 110
Query: 143 AALDKIKTELEGHT------------------IGILVNNVGANYTYPM------------ 172
A T +LVNN + Y P+
Sbjct: 111 TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV 170
Query: 173 YLDEIPERDLWNLINLNIATTTMLTKLVLPQM------KERGRGAIVNVSSSSEGQPWPL 226
E E +L N L K ++ +I+N+ + QP
Sbjct: 171 GDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLG 230
Query: 227 FTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAFV 263
+T+Y +K + + + +E I V + P
Sbjct: 231 YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS 267
Score = 35.9 bits (83), Expect = 0.018
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG +G++ A L G + L R+ + + +
Sbjct: 51 VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL 91
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 96.5 bits (241), Expect = 6e-23
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 27/195 (13%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG T GIG+A A +G + L +KLK+ A ++ G + +A++S+ K+
Sbjct: 32 VTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----GKDVFVFSANLSDRKS 87
Query: 144 ALDKIKTELEGH-TIGILVNNVGA---NYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
+ I ILVNN G M + W+ ++ +N+ + LT+
Sbjct: 88 IKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQD------WDDVLAVNLTAASTLTR 141
Query: 199 LVLPQM-KERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYG 252
++ M + R G I+N++S GQ T Y A+K + FS+AL E
Sbjct: 142 ELIHSMMRRRY-GRIINITSIVGVVGNPGQ-----TNYCAAKAGLIGFSKALAQEIASRN 195
Query: 253 ITVQHIAPAFVSTKM 267
ITV IAP F+ + M
Sbjct: 196 ITVNCIAPGFIKSAM 210
Score = 45.2 bits (108), Expect = 2e-05
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG T GIG+A A +G + L +KLK+ A ++G
Sbjct: 32 VTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG 72
Score = 27.1 bits (61), Expect = 9.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 350 FTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATP 394
F++ L E + +T ++PG + S MTD QK +++ P
Sbjct: 183 FSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIP 227
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Length = 246
Score = 95.6 bits (239), Expect = 7e-23
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 39/203 (19%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG + GIG+A A +LA++G N+V+ + +K + EI+ G + AD++ +
Sbjct: 9 VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK-KLGSDAIAVRADVANAE 67
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNL------------INLN 189
+ +K ++ + ILVNN G +D NL IN N
Sbjct: 68 DVTNMVKQTVDVFGQVDILVNNAGVT------------KD--NLLMRMKEEEWDTVINTN 113
Query: 190 IATTTMLTKLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEAL 244
+ + TK V M + G IVN++S GQ Y A+K + ++
Sbjct: 114 LKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQ-----ANYVAAKAGVIGLTKTS 168
Query: 245 RVEYQKYGITVQHIAPAFVSTKM 267
E ITV IAP F++T M
Sbjct: 169 AKELASRNITVNAIAPGFIATDM 191
Score = 40.5 bits (96), Expect = 5e-04
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEI 40
VTG + GIG+A A +LA++G N+V+ + +K + EI
Sbjct: 9 VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEI 49
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 95.6 bits (239), Expect = 8e-23
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 39/203 (19%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG + GIG++ A +LA G N+ + + + EK + +EI+ GV + I A++++
Sbjct: 9 VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK-AKGVDSFAIQANVADAD 67
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNL------------INLN 189
IK + ++ +LVNN G RD NL I+ N
Sbjct: 68 EVKAMIKEVVSQFGSLDVLVNNAGIT------------RD--NLLMRMKEQEWDDVIDTN 113
Query: 190 IATTTMLTKLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEAL 244
+ + PQM + GAI+N+SS GQ Y A+K + +++
Sbjct: 114 LKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQ-----ANYVATKAGVIGLTKSA 168
Query: 245 RVEYQKYGITVQHIAPAFVSTKM 267
E GITV +AP F+ + M
Sbjct: 169 ARELASRGITVNAVAPGFIVSDM 191
Score = 40.5 bits (96), Expect = 5e-04
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEI 40
VTG + GIG++ A +LA G N+ + + + EK + +EI
Sbjct: 9 VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI 49
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann
fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus}
SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 95.6 bits (239), Expect = 8e-23
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 39/203 (19%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG + GIG+A A L + G +++ +R+ + ++ +K+IE +G Q D+S+
Sbjct: 6 VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIE-AYGGQAITFGGDVSKEA 64
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNL------------INLN 189
+KT ++ TI ++VNN G RD L I+LN
Sbjct: 65 DVEAMMKTAIDAWGTIDVVVNNAGIT------------RD--TLLIRMKKSQWDEVIDLN 110
Query: 190 IATTTMLTKLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEAL 244
+ + T+ M ++ +G I+N++S GQ YAA+K + FS+
Sbjct: 111 LTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ-----ANYAAAKAGVIGFSKTA 165
Query: 245 RVEYQKYGITVQHIAPAFVSTKM 267
E I V + P F+++ M
Sbjct: 166 AREGASRNINVNVVCPGFIASDM 188
Score = 39.8 bits (94), Expect = 8e-04
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEI 40
VTG + GIG+A A L + G +++ +R+ + ++ +K+I
Sbjct: 6 VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI 46
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 95.3 bits (238), Expect = 1e-22
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 27/195 (13%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + GIG+A A LA RG ++ + + + + + G K +A +++ ++
Sbjct: 14 VTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL----GDNGKGMALNVTNPES 69
Query: 144 ALDKIKTELEGH-TIGILVNNVGA---NYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
+K + + ILVNN G N M +E W+ ++ N+ + L+K
Sbjct: 70 IEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE------WSDIMETNLTSIFRLSK 123
Query: 199 LVLPQM-KERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYG 252
VL M K+R G I+NV S GQ YAA+K + F++++ E G
Sbjct: 124 AVLRGMMKKRQ-GRIINVGSVVGTMGNAGQ-----ANYAAAKAGVIGFTKSMAREVASRG 177
Query: 253 ITVQHIAPAFVSTKM 267
+TV +AP F+ T M
Sbjct: 178 VTVNTVAPGFIETDM 192
Score = 45.9 bits (110), Expect = 7e-06
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG + GIG+A A LA RG ++ + + + + +G
Sbjct: 14 VTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG 54
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 95.3 bits (238), Expect = 1e-22
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 23/195 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG GIG + L + G +V + K ++ + G ++ +
Sbjct: 18 VTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNVGDWD 76
Query: 143 AALDKIKTELEGH-TIGILVNNVGA---NYTYPMYLDEIPERDLWN-LINLNIATTTMLT 197
+ I +LVNN G M ++ W +I+ N+ + +T
Sbjct: 77 STKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTRED------WQAVIDTNLTSLFNVT 130
Query: 198 KLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYG 252
K V+ M ERG G I+N+SS + GQ T Y+ +K I F+ +L E G
Sbjct: 131 KQVIDGMVERGWGRIINISSVNGQKGQFGQ-----TNYSTAKAGIHGFTMSLAQEVATKG 185
Query: 253 ITVQHIAPAFVSTKM 267
+TV ++P ++ T M
Sbjct: 186 VTVNTVSPGYIGTDM 200
Score = 36.3 bits (85), Expect = 0.011
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG GIG + L + G +V + K ++
Sbjct: 18 VTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQ 58
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 95.3 bits (238), Expect = 2e-22
Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 39/203 (19%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG + GIG+A A ELA G + + + + + I G + + AD+S+
Sbjct: 33 VTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA-AAGGEAFAVKADVSQES 91
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNL------------INLN 189
+E + +LVNN G RD L ++LN
Sbjct: 92 EVEALFAAVIERWGRLDVLVNNAGIT------------RD--TLLLRMKRDDWQSVLDLN 137
Query: 190 IATTTMLTKLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEAL 244
+ + ++ M ++ G I+N++S GQ Y+A+K + ++ +
Sbjct: 138 LGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQ-----ANYSAAKAGVIGLTKTV 192
Query: 245 RVEYQKYGITVQHIAPAFVSTKM 267
E GITV +AP F++T M
Sbjct: 193 AKELASRGITVNAVAPGFIATDM 215
Score = 39.1 bits (92), Expect = 0.001
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEI 40
VTG + GIG+A A ELA G + + + + + I
Sbjct: 33 VTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAI 73
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 95.3 bits (238), Expect = 2e-22
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 23/195 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
VTG G+G A + L G+ + + S + + G K A D+++ +
Sbjct: 30 VTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHER-DAGRDFKAYAVDVADFE 88
Query: 143 AALDKIKTELEGH-TIGILVNNVG---ANYTYPMYLDEIPERDLWN-LINLNIATTTMLT 197
+ + L + +L+NN G M + W+ ++ ++ +T
Sbjct: 89 SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGD------WDAVMRTDLDAMFNVT 142
Query: 198 KLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYG 252
K + M ER G IVN+ S + GQ YA++K I F++ L +E K G
Sbjct: 143 KQFIAGMVERRFGRIVNIGSVNGSRGAFGQ-----ANYASAKAGIHGFTKTLALETAKRG 197
Query: 253 ITVQHIAPAFVSTKM 267
ITV ++P +++T M
Sbjct: 198 ITVNTVSPGYLATAM 212
Score = 36.4 bits (85), Expect = 0.011
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEI 40
VTG G+G A + L G+ + + S + +
Sbjct: 30 VTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHE 70
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural genomics,
secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 94.5 bits (236), Expect = 2e-22
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 40/204 (19%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+TG + GIG+A A LA G + + + EK ++ A+E ++ A++ E +
Sbjct: 6 ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAE 65
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNL------------INLN 189
AA + E + LVNN G RD L + N
Sbjct: 66 AATALVHQAAEVLGGLDTLVNNAGIT------------RD--TLLVRMKDEDWEAVLEAN 111
Query: 190 IATTTMLTKLVLPQM-KERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEA 243
++ T+ + M K R G IVN++S GQ Y ASK + F+ A
Sbjct: 112 LSAVFRTTREAVKLMMKARF-GRIVNITSVVGILGNPGQ-----ANYVASKAGLIGFTRA 165
Query: 244 LRVEYQKYGITVQHIAPAFVSTKM 267
+ EY + GITV +AP F+ T+M
Sbjct: 166 VAKEYAQRGITVNAVAPGFIETEM 189
Score = 40.9 bits (97), Expect = 3e-04
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL-ISRTLEKLKKTAKEIG 41
+TG + GIG+A A LA G + + + EK ++ A+E
Sbjct: 6 ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEAR 47
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 94.9 bits (237), Expect = 3e-22
Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 20/194 (10%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
+TG GIG+ A R G +V+ + +K I + + + D+++
Sbjct: 21 ITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISF--VHCDVTKDED 78
Query: 142 -KAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTML-TK 198
+ +D + H + I+ NVG T P + E D ++++N L K
Sbjct: 79 VRNLVDTT---IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN-VYGAFLVAK 134
Query: 199 LVLPQMKERGRGAIVNVSS-----SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGI 253
M +G+IV +S + EG Y A+K + + +L E +YGI
Sbjct: 135 HAARVMIPAKKGSIVFTASISSFTAGEGVSHV----YTATKHAVLGLTTSLCTELGEYGI 190
Query: 254 TVQHIAPAFVSTKM 267
V ++P V++ +
Sbjct: 191 RVNCVSPYIVASPL 204
Score = 36.8 bits (86), Expect = 0.008
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG GIG+ A R G +V+ + +K IG
Sbjct: 21 ITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG 61
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 94.5 bits (236), Expect = 3e-22
Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG + GIG+A A G ++ +S + I D++
Sbjct: 13 VTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPDQ 60
Query: 144 ALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWN-LINLNIATTTMLTKLVL 201
I + + +I +LVNN G ++ + + W +I++N+ +K +
Sbjct: 61 VKASIDHIFKEYGSISVLVNNAG--IESYGKIESMSMGE-WRRIIDVNLFGYYYASKFAI 117
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
P M +IVN+SS + Y SK + ++++ ++Y + + PA
Sbjct: 118 PYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPA 176
Query: 262 FVSTKM 267
+ T +
Sbjct: 177 TIDTPL 182
Score = 32.1 bits (74), Expect = 0.26
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
VTG + GIG+A A G ++ +S + + I
Sbjct: 13 VTGASMGIGRAIAERFVDEGSKVIDLSIH-DPGEAKYDHI 51
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 94.6 bits (236), Expect = 4e-22
Identities = 44/239 (18%), Positives = 79/239 (33%), Gaps = 39/239 (16%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI------------SRTLEKLKKTAKEIETTHGVQT 131
VTG G G+++A +LA G +I+L T L++ E+E T G +
Sbjct: 15 VTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GRKA 73
Query: 132 KIIAADMSEG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINL 188
D+ + L E G + ++V N G +P + + ++
Sbjct: 74 YTAEVDVRDRAAVSRELANAVAEF-GK-LDVVVANAG----ICPLGAHLPVQAFADAFDV 127
Query: 189 NIATTTMLT-KLVLPQMKERGRGAIVNVSS-----------SSEGQPWPLFTVYAASKIY 236
+ + T LP + I+ S + G P Y+ +K
Sbjct: 128 DF-VGVINTVHAALPYLTSGAS--IITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQL 184
Query: 237 IRYFSEALRVEYQKYGITVQHIAPAFVSTKM--NNFSYRVRNKSFFVPDAEQYARSAVS 293
+ ++ L + I I P V+T M + YR P + +
Sbjct: 185 VDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPA 243
Score = 32.2 bits (74), Expect = 0.25
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 12/52 (23%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI------------SRTLEKLKKTAKEI 40
VTG G G+++A +LA G +I+L T L++ E+
Sbjct: 15 VTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 92.2 bits (230), Expect = 2e-21
Identities = 44/193 (22%), Positives = 76/193 (39%), Gaps = 22/193 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG-- 141
VTG G+G L G + ++ A E+ G ++ + D+S
Sbjct: 11 VTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEAD 66
Query: 142 -KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNL---INLNIATTTML- 196
+ ++ L + +LVNN G ++ D ++ IN + +
Sbjct: 67 WTLVMAAVQRRLGT--LNVLVNNAGILLPGD--METGRLED-FSRLLKINT---ESVFIG 118
Query: 197 TKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEY--QKYGIT 254
+ + MKE G G+I+N++S S P + Y+ASK + + A + Q Y I
Sbjct: 119 CQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177
Query: 255 VQHIAPAFVSTKM 267
V I P + T M
Sbjct: 178 VNSIHPDGIYTPM 190
Score = 38.6 bits (91), Expect = 0.002
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG G+G L G + ++ A E+G
Sbjct: 11 VTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG 51
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 92.2 bits (230), Expect = 2e-21
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+TG + GIG A A L + G +++ EKLK + I +++ +
Sbjct: 19 ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL----KDNYTIEVCNLANKEE 74
Query: 144 ALDKIKTELEGHTIGILVNNVGA---NYTYPMYLDEIPERDLWN-LINLNIATTTMLTKL 199
+ I + + ILV N G M + ++ +I++N+ +L +
Sbjct: 75 CSNLIS---KTSNLDILVCNAGITSDTLAIRMKDQD------FDKVIDINLKANFILNRE 125
Query: 200 VLPQM-KERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGI 253
+ +M ++R G I+N+SS GQ Y ASK + +++L E GI
Sbjct: 126 AIKKMIQKRY-GRIINISSIVGIAGNPGQ-----ANYCASKAGLIGMTKSLSYEVATRGI 179
Query: 254 TVQHIAPAFVSTKM 267
TV +AP F+ + M
Sbjct: 180 TVNAVAPGFIKSDM 193
Score = 45.2 bits (108), Expect = 1e-05
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITI 60
+TG + GIG A A L + G +++ EKLK + N ++ + N +
Sbjct: 19 ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-DNYTIEVCN------LAN 71
Query: 61 ADAVEGL 67
+ L
Sbjct: 72 KEECSNL 78
Score = 27.5 bits (62), Expect = 7.8
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 350 FTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATP 394
T+ L E G+T ++PG + S MTD Q+ ++ P
Sbjct: 166 MTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIP 210
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 89.2 bits (222), Expect = 7e-21
Identities = 23/187 (12%), Positives = 61/187 (32%), Gaps = 27/187 (14%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+ G + +G A L ++ ++ R + D++
Sbjct: 8 LIGASGTLGSAVKERLEKKA-EVITAGRHSGD------------------VTVDITN-ID 47
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
++ K+ ++ + +V+ G+ P L E+ I+ + L L +
Sbjct: 48 SIKKMYEQVGK--VDAIVSATGSATFSP--LTELTPEKNAVTISSKLGGQINLVLLGIDS 103
Query: 204 MKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPAFV 263
+ ++G + P A + + F+++ +E GI + ++P +
Sbjct: 104 LNDKGS--FTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVL 160
Query: 264 STKMNNF 270
+
Sbjct: 161 EESWDKL 167
Score = 33.0 bits (76), Expect = 0.11
Identities = 16/124 (12%), Positives = 42/124 (33%), Gaps = 31/124 (25%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRT----------LEKLKKTAKEIGMINISLI-- 48
+ G + +G A L ++ ++ R ++ +KK +++G ++ ++
Sbjct: 8 LIGASGTLGSAVKERLEKKA-EVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDA-IVSA 65
Query: 49 --ISNFPCVTQITIADAVEGLYSTKNQGLCKKFTGPMVTGCTDGIGQAYAHELARRGINI 106
+ F +T++T + K G + L +G +
Sbjct: 66 TGSATFSPLTELTPEKN--------AVTISSKLGGQINL------VLLGIDSLNDKG-SF 110
Query: 107 VLIS 110
L +
Sbjct: 111 TLTT 114
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 90.7 bits (226), Expect = 1e-20
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 7/188 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKL--KKTAKEIETTHGVQTKIIAADMSEG 141
VTG GIG+A A AR G ++ + E+ ++ IE G + ++ D+S+
Sbjct: 54 VTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-CGRKAVLLPGDLSDE 112
Query: 142 KAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
A + E + IL G P + ++ +N+ +T+
Sbjct: 113 SFARSLVHKAREALGGLDILALVAGKQTAIPE-IKDLTSEQFQQTFAVNVFALFWITQEA 171
Query: 201 LPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAP 260
+P + +G +I+ SS QP P YAA+K I +S L + + GI V +AP
Sbjct: 172 IPLLP-KG-ASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAP 229
Query: 261 AFVSTKMN 268
+ T +
Sbjct: 230 GPIWTALQ 237
Score = 27.1 bits (61), Expect = 10.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL 25
VTG GIG+A A AR G ++ +
Sbjct: 54 VTGGDSGIGRAAAIAYAREGADVAI 78
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 88.5 bits (220), Expect = 5e-20
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 22/199 (11%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS--- 139
+V+G G+G+A L G+ +V+ EK K A E+ G + + ++ +++
Sbjct: 34 IVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GNRAEFVSTNVTSED 89
Query: 140 EGKAALDKIKTELEGHTIGILVNNVG---ANYTYPMYLDEIPERDLWNLINLNIATTTML 196
AA++ G +V + G A I+L + T +
Sbjct: 90 SVLAAIEAANQ--LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNV 147
Query: 197 TKLVLPQMKER------GRGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEALRVEY 248
+LV + RGA+V +S + EGQ T YAA+K + + A +
Sbjct: 148 ARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ--TAYAAAKAGVIGLTIAAARDL 205
Query: 249 QKYGITVQHIAPAFVSTKM 267
GI V IAP + T +
Sbjct: 206 SSAGIRVNTIAPGTMKTPI 224
Score = 41.5 bits (98), Expect = 3e-04
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
V+G G+G+A L G+ +V+ EK K A E+G
Sbjct: 35 VSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG 75
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 89.3 bits (222), Expect = 1e-19
Identities = 55/202 (27%), Positives = 80/202 (39%), Gaps = 40/202 (19%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL--ISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG 141
VTG GIG A AR G +V + E LK+ A ++ + D++
Sbjct: 218 VTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV------GGTALTLDVTAD 271
Query: 142 KAALDKIKTELE--GHTIGILVNNVG-------ANYTYPMYLDEIPERDLWNL-INLNIA 191
A E G + ILVNN G AN M W+ I +N+
Sbjct: 272 DAVDKITAHVTEHHGGKVDILVNNAGITRDKLLAN----MDEKR------WDAVIAVNLL 321
Query: 192 TTTMLTKLVLPQM-KERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALR 245
LT+ ++ G G ++ +SS + GQ T YA +K + +EAL
Sbjct: 322 APQRLTEGLVGNGTIGEG-GRVIGLSSMAGIAGNRGQ-----TNYATTKAGMIGLAEALA 375
Query: 246 VEYQKYGITVQHIAPAFVSTKM 267
GIT+ +AP F+ TKM
Sbjct: 376 PVLADKGITINAVAPGFIETKM 397
Score = 43.4 bits (103), Expect = 1e-04
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVL--ISRTLEKLKKTAKEIGMINISLIISNFPCVTQI 58
VTG GIG A AR G +V + E LK+ A ++G ++L ++ V +I
Sbjct: 218 VTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKI 277
Query: 59 TIADAVE 65
A E
Sbjct: 278 -TAHVTE 283
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 86.1 bits (214), Expect = 2e-19
Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 25/200 (12%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS--- 139
+VTG + G+G A LA+ G ++ + ++ A E+ G + AD++
Sbjct: 11 IVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GAAVRFRNADVTNEA 66
Query: 140 EGKAALDKIKTELEGHTIGILVNNVG---ANYTYPMYLDEIPERDLWN-LINLNIATTTM 195
+ AAL K E + LVN G D + + +N+ T
Sbjct: 67 DATAALAFAKQEFGH--VHGLVNCAGTAPGEKILGR--SGPHALDSFARTVAVNLIGTFN 122
Query: 196 LTKLVLPQMKER------GRGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEALRVE 247
+ +L M + RG IVN +S + +GQ YAASK + + E
Sbjct: 123 MIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQ--AAYAASKGGVAALTLPAARE 180
Query: 248 YQKYGITVQHIAPAFVSTKM 267
++GI V IAP T M
Sbjct: 181 LARFGIRVVTIAPGIFDTPM 200
Score = 41.4 bits (98), Expect = 3e-04
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG + G+G A LA+ G ++ + ++ A E+G
Sbjct: 12 VTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG 52
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 86.2 bits (214), Expect = 2e-19
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 23/200 (11%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS--- 139
++TG G+G A A L +G + VL+ + AK++ G AD++
Sbjct: 16 VITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVTSEK 71
Query: 140 EGKAALDKIKTELEGHTIGILVNNVG---ANYTYPMYLDEIPERDLWN-LINLNIATTTM 195
+ + AL K + + + VN G A+ TY + + + + ++++N+ T
Sbjct: 72 DVQTALALAKGKFGR--VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 129
Query: 196 LTKLVLPQMKER------GRGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEALRVE 247
+ +LV +M + RG I+N +S + EGQ Y+ASK I + + +
Sbjct: 130 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ--AAYSASKGGIVGMTLPIARD 187
Query: 248 YQKYGITVQHIAPAFVSTKM 267
GI V IAP T +
Sbjct: 188 LAPIGIRVMTIAPGLFGTPL 207
Score = 41.1 bits (97), Expect = 3e-04
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG G+G A A L +G + VL+ + AK++G
Sbjct: 17 ITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG 57
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 86.4 bits (215), Expect = 3e-19
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLI-SRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+TG GIG+A + A+ G NI + +T + +E GV+ ++ D+S+ +
Sbjct: 52 ITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-EGVKCVLLPGDLSDEQ 110
Query: 143 AALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVL 201
D ++ + ++ ILVNNV Y L+ I L +NI + +TK L
Sbjct: 111 HCKDIVQETVRQLGSLNILVNNVAQQYPQQG-LEYITAEQLEKTFRINIFSYFHVTKAAL 169
Query: 202 PQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQHIAPA 261
+K +G I+N +S + Y+A+K I F+ +L + GI V +AP
Sbjct: 170 SHLK-QG-DVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPG 227
Query: 262 FVSTKMN 268
+ T +
Sbjct: 228 PIWTPLI 234
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 85.9 bits (213), Expect = 3e-18
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 31/201 (15%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL---------ISRTLEKLKKTAKEIETTHGVQTKII 134
+TG G+G+ Y+ E A+ G +V+ + EI G +
Sbjct: 13 ITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG---VAV 69
Query: 135 A--ADMSEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIA 191
A ++ +G ++T ++ T+ +++NN G + ++ E+D +I++++
Sbjct: 70 ADYNNVLDGDKI---VETAVKNFGTVHVIINNAG--ILRDASMKKMTEKDYKLVIDVHLN 124
Query: 192 TTTMLTKLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRV 246
+TK P +++ G IVN SS + GQ YA++K + F+E L
Sbjct: 125 GAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQ-----ANYASAKSALLGFAETLAK 179
Query: 247 EYQKYGITVQHIAPAFVSTKM 267
E KY I IAP ++M
Sbjct: 180 EGAKYNIKANAIAP-LARSRM 199
Score = 84.8 bits (210), Expect = 7e-18
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIA--ADMSEG 141
+TG G+G+ YA A+ G +V+ + KT EI+ G + D+++
Sbjct: 327 ITGAGAGLGKEYAKWFAKYGAKVVVND--FKDATKTVDEIKAAGG---EAWPDQHDVAKD 381
Query: 142 KAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLV 200
A+ IK ++ + TI ILVNN G ++ +++ ++ +++ T L++L
Sbjct: 382 SEAI--IKNVIDKYGTIDILVNNAGI--LRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLA 437
Query: 201 LPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITV 255
P E+ G I+N++S+S GQ Y++SK I S+ + +E K I V
Sbjct: 438 WPYFVEKQFGRIINITSTSGIYGNFGQ-----ANYSSSKAGILGLSKTMAIEGAKNNIKV 492
Query: 256 QHIAPAFVSTKM 267
+AP T M
Sbjct: 493 NIVAP-HAETAM 503
Score = 36.6 bits (85), Expect = 0.016
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 1 VTGCTDGIGQAYAHELARRGINIV 24
+TG G+G+ Y+ E A+ G +V
Sbjct: 13 ITGAGGGLGKYYSLEFAKLGAKVV 36
Score = 32.4 bits (74), Expect = 0.33
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 1 VTGCTDGIGQAYAHELARRGINIV 24
+TG G+G+ YA A+ G +V
Sbjct: 327 ITGAGAGLGKEYAKWFAKYGAKVV 350
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 82.8 bits (205), Expect = 9e-18
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL---------ISRTLEKLKKTAKEIETTHGVQTKII 134
VTG G+G+AYA A RG +V+ + + K +EI G K +
Sbjct: 14 VTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAV 70
Query: 135 A--ADMSEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIA 191
A + G+ +KT L+ I ++VNN G I + D + +++
Sbjct: 71 ANYDSVEAGEKL---VKTALDTFGRIDVVVNNAG--ILRDRSFSRISDEDWDIIQRVHLR 125
Query: 192 TTTMLTKLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRV 246
+ +T+ MK++ G I+ +S+S GQ Y+A+K+ + + L +
Sbjct: 126 GSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ-----ANYSAAKLGLLGLANTLVI 180
Query: 247 EYQKYGITVQHIAPAFVSTKM 267
E +K I IAP ++M
Sbjct: 181 EGRKNNIHCNTIAPNA-GSRM 200
Score = 36.6 bits (85), Expect = 0.011
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 VTGCTDGIGQAYAHELARRGINIV 24
VTG G+G+AYA A RG +V
Sbjct: 14 VTGAGGGLGRAYALAFAERGALVV 37
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 81.2 bits (201), Expect = 1e-17
Identities = 47/248 (18%), Positives = 95/248 (38%), Gaps = 38/248 (15%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLI--SRTLEKLKKTAKEIETTHGVQTKIIAADMSE 140
+VTG GIG +L + +I +R +EK A E+++ + ++ ++
Sbjct: 7 VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK----ATELKSIKDSRVHVLPLTVTC 62
Query: 141 G---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLT 197
+ K+ + + +L+NN G +Y E + +++N + +LT
Sbjct: 63 DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGT-NTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 198 KLVLPQMKE-----------RGRGAIVNVSSS-------SEGQPWPLFTVYAASKIYIRY 239
+ +LP +K R A++ +SS + G Y SK I
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 240 FSEALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVSTL-GVT 298
F L V+ + + V + P +V T + + + EQ +S+ +
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAAL--------TVEQSTAELISSFNKLD 233
Query: 299 DTSTG-FW 305
++ G F+
Sbjct: 234 NSHNGRFF 241
Score = 31.5 bits (72), Expect = 0.34
Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 9/70 (12%)
Query: 349 YFTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATPEQFARSAVKTL-GV 407
F L ++ ++ + PG V + + N + T EQ + + +
Sbjct: 181 MFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAAL--------TVEQSTAELISSFNKL 232
Query: 408 TDTTTGYWLH 417
++ G +
Sbjct: 233 DNSHNGRFFM 242
Score = 28.1 bits (63), Expect = 4.4
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI--SRTLEKLKKTAKEIGMINISLI 48
VTG GIG +L + +I +R +EK + K I + ++
Sbjct: 8 VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKSIKDSRVHVL 56
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 80.8 bits (199), Expect = 4e-17
Identities = 50/285 (17%), Positives = 84/285 (29%), Gaps = 87/285 (30%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG- 141
+VTG GIG +L+ GI +VL R + K + ++++ ++ D+++
Sbjct: 16 VVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPI 75
Query: 142 ---KAALDKIKTELEGHTIGILVNNVG----------------------------ANYTY 170
+ D IKT + ILVNN G
Sbjct: 76 ATMSSLADFIKTHFGK--LDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPE 133
Query: 171 PMYLDEIPERDLWNLINLNIATTTMLTKLVLPQMKERGRGAIVNVSS------------- 217
L + +N +T++++P ++ IVNVSS
Sbjct: 134 AQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETA 193
Query: 218 -----------------------------SSEGQPWP-LFTVYAASKIYIRYFSEALRVE 247
E WP Y SK + ++ L +
Sbjct: 194 LEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANK 253
Query: 248 YQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAV 292
V + P V T+MN + E+ A V
Sbjct: 254 IP--KFQVNCVCPGLVKTEMN------YGIGNYTA--EEGAEHVV 288
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 78.4 bits (194), Expect = 1e-16
Identities = 40/201 (19%), Positives = 67/201 (33%), Gaps = 47/201 (23%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG A A LA G + + R + + GV+ + D
Sbjct: 20 VTGGNRGIGLAIAQRLAADGHKVAVTHR-------GSGAPKGLFGVEVDV--TDSDAVDR 70
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNL------------INLNIA 191
A ++ + +LV+N G + D IN N+
Sbjct: 71 AFTAVEEHQGP--VEVLVSNAGLS------------AD--AFLMRMTEEKFEKVINANLT 114
Query: 192 TTTMLTKLVLPQMKERGRGAIVNVSS-----SSEGQPWPLFTVYAASKIYIRYFSEALRV 246
+ + M+ G ++ + S Q YAASK + + ++
Sbjct: 115 GAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ-----ANYAASKAGVIGMARSIAR 169
Query: 247 EYQKYGITVQHIAPAFVSTKM 267
E K +T +AP ++ T M
Sbjct: 170 ELSKANVTANVVAPGYIDTDM 190
Score = 34.8 bits (81), Expect = 0.036
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKK 35
VTG GIG A A LA G + + R K
Sbjct: 20 VTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG 54
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase;
1.99A {Streptomyces coelicolor}
Length = 253
Score = 77.6 bits (192), Expect = 2e-16
Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 33/194 (17%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
VTG GIG A A A G + + R+ E E V+ I D + +
Sbjct: 26 VTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------EGFLAVKCDI--TDTEQVEQ 76
Query: 144 ALDKIKTELEGHTIGILVNNVGA---NYTYPMYLDEIPERDLWN-LINLNIATTTMLTKL 199
A +I+ + +L+ N G M ++ + ++ N+ T + K
Sbjct: 77 AYKEIEETHGP--VEVLIANAGVTKDQLLMRMSEED------FTSVVETNLTGTFRVVKR 128
Query: 200 VLPQM-KERGRGAIVNVSS-----SSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGI 253
M + + +G +V +SS S GQ YAASK + F+ +L E I
Sbjct: 129 ANRAMLRAK-KGRVVLISSVVGLLGSAGQ-----ANYAASKAGLVGFARSLARELGSRNI 182
Query: 254 TVQHIAPAFVSTKM 267
T +AP FV T M
Sbjct: 183 TFNVVAPGFVDTDM 196
Score = 35.6 bits (83), Expect = 0.020
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKK 35
VTG GIG A A A G + + R+ E +
Sbjct: 26 VTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG 60
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 78.2 bits (193), Expect = 2e-16
Identities = 49/239 (20%), Positives = 86/239 (35%), Gaps = 60/239 (25%)
Query: 84 VTGCTDGIGQAYAHELARR-GINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEG- 141
VTG GIG A +L R ++VL +R + + + ++++ G+ + D+ +
Sbjct: 9 VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-GLSPRFHQLDIDDLQ 67
Query: 142 --KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNL-INLNIATTTMLTK 198
+A D ++ E G + +LVNN G + D P + + N T +
Sbjct: 68 SIRALRDFLRKEYGG--LDVLVNNAGIAFKVA---DPTPFHIQAEVTMKTNFFGTRDVCT 122
Query: 199 LVLPQMKERGRGAIVNVSSS---------------------------------------- 218
+LP +K +GR +VNVSS
Sbjct: 123 ELLPLIKPQGR--VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 180
Query: 219 --SEGQPWPLFTVYAASKI----YIRYFSEALRVEYQKYGITVQHIAPAFVSTKMNNFS 271
+ + WP + Y +KI R + L + + I + P +V T M
Sbjct: 181 GVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 238
Score = 42.7 bits (101), Expect = 1e-04
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 1 VTGCTDGIGQAYAHELARR-GINIVLISRTLEKLKKTAKEI 40
VTG GIG A +L R ++VL +R + + + +++
Sbjct: 9 VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQL 49
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 77.7 bits (192), Expect = 2e-16
Identities = 35/204 (17%), Positives = 59/204 (28%), Gaps = 35/204 (17%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
++GC GIG A L G IV I ++ ++ T G + IA +++
Sbjct: 6 ISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV---IADLSTAEGRKQ-AIADVLAKCSK 61
Query: 144 ALDKIKTELEGHTIGILVNNVG-------------ANYTYPMY-----LDEIPERDLWNL 185
+D LV G NY L + +
Sbjct: 62 GMD------------GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAA 109
Query: 186 INLNIATTTMLTKLVLPQMKERGRGAIVNVSSSSEGQ-PWPLFTVYAASKIYIRYFSEAL 244
+ ++ + L P G + E YA SK +
Sbjct: 110 VVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKR 169
Query: 245 RVEYQKYGITVQHIAPAFVSTKMN 268
+ + G+ + IAP T +
Sbjct: 170 AAAWGEAGVRLNTIAPGATETPLL 193
Score = 35.8 bits (83), Expect = 0.019
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISR 28
++GC GIG A L G IV I
Sbjct: 6 ISGCATGIGAATRKVLEAAGHQIVGIDI 33
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 77.4 bits (191), Expect = 3e-16
Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 23/209 (11%)
Query: 83 MVTGCTDGIGQAYAHELA---RRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMS 139
++TGC G+G L + ++ R E+ K+ +++ H I+ D+
Sbjct: 25 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHS-NIHILEIDLR 82
Query: 140 EG---KAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTML 196
+ I+ + + +L NN G + + ++L + + N ML
Sbjct: 83 NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSAR-ITAVRSQELLDTLQTNTVVPIML 141
Query: 197 TKLVLPQMKE-----------RGRGAIVNVSS---SSEGQPWPLFTVYAASKIYIRYFSE 242
K LP +K+ GR AI+N+SS S +G Y SK + ++
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 201
Query: 243 ALRVEYQKYGITVQHIAPAFVSTKMNNFS 271
+L V+ I + P +V T M S
Sbjct: 202 SLSVDLYPQRIMCVSLHPGWVKTDMGGSS 230
Score = 30.8 bits (70), Expect = 0.82
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 9/70 (12%)
Query: 349 YFTEGLRIEYENSGLTFQLLSPGLVSSKMTDFNPSGQKSKLLSATPEQFARSAVKTL-GV 407
T+ L ++ + L PG V + M G S L V+T+ +
Sbjct: 198 AATKSLSVDLYPQRIMCVSLHPGWVKTDM------GGSSAPL--DVPTSTGQIVQTISKL 249
Query: 408 TDTTTGYWLH 417
+ G +++
Sbjct: 250 GEKQNGGFVN 259
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 74.7 bits (184), Expect = 5e-15
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 33/207 (15%)
Query: 84 VTGCTDGIGQAYAHELARRGINIV----------LISRTLEKLKKTAKEIETTHGVQTKI 133
VTG GIG+A+A A G +V + + EI G +
Sbjct: 32 VTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEIT-AAGGEAVA 90
Query: 134 IAADMSEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNL-INLNIA 191
+++++ A I+T +E + +LVNN G + E + ++ I +++
Sbjct: 91 DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAG--IVRDRMIANTSEEE-FDAVIAVHLK 147
Query: 192 TTTMLTKLVLPQMKERGR------GAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYF 240
+ + + G I+N SS + GQ Y+A+K I
Sbjct: 148 GHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQ-----GNYSAAKAGIATL 202
Query: 241 SEALRVEYQKYGITVQHIAPAFVSTKM 267
+ E +YG+TV IAP T+M
Sbjct: 203 TLVGAAEMGRYGVTVNAIAP-SARTRM 228
Score = 35.8 bits (83), Expect = 0.021
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 1 VTGCTDGIGQAYAHELARRGINIV 24
VTG GIG+A+A A G +V
Sbjct: 32 VTGAGGGIGRAHALAFAAEGARVV 55
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 75.6 bits (186), Expect = 7e-15
Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 30/195 (15%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVL---------ISRTLEKLKKTAKEIETTHGVQTKII 134
VTG G+G+ YA A RG +V+ + EI G + +
Sbjct: 24 VTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG---EAV 80
Query: 135 A--ADMSEGKAALDKIKTELEGH-TIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIA 191
A + +G I+T ++ + ILVNN G L + E+D + ++++
Sbjct: 81 ADYNSVIDGAKV---IETAIKAFGRVDILVNNAG--ILRDRSLVKTSEQDWNLVNDVHLK 135
Query: 192 TTTMLTKLVLPQMKERGRGAIVNVSSSS-----EGQPWPLFTVYAASKIYIRYFSEALRV 246
+ T+ P MK++ G I+ SS+S GQ Y A+K+ + + + +
Sbjct: 136 GSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQ-----VNYTAAKMGLIGLANTVAI 190
Query: 247 EYQKYGITVQHIAPA 261
E + + I P
Sbjct: 191 EGARNNVLCNVIVPT 205
Score = 36.7 bits (85), Expect = 0.014
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 1 VTGCTDGIGQAYAHELARRGINIV 24
VTG G+G+ YA A RG +V
Sbjct: 24 VTGAGAGLGREYALLFAERGAKVV 47
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 72.3 bits (178), Expect = 1e-14
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 29/197 (14%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+VTG G+G+A A L RG +V++ E G + D++ +
Sbjct: 6 LVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------GEDLIYVEGDVTREE 52
Query: 143 AALDKIKTELEGHTIGILVNNVG---ANYTYPMYLDEIPERDLWN-LINLNIATTTMLTK 198
+ E + +V+ G A + + + ++ +N+ T + +
Sbjct: 53 DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGK--EGPHGLESFRRVLEVNLLGTFNVLR 110
Query: 199 LVLPQMKER------GRGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEALRVEYQK 250
L M+E RG IVN +S + EGQ YAASK + + E
Sbjct: 111 LAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ--AAYAASKGGVVALTLPAARELAG 168
Query: 251 YGITVQHIAPAFVSTKM 267
+GI V +AP T +
Sbjct: 169 WGIRVVTVAPGLFDTPL 185
Score = 29.9 bits (68), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLI 26
VTG G+G+A A L RG +V++
Sbjct: 7 VTGGASGLGRAAALALKARGYRVVVL 32
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 72.3 bits (178), Expect = 1e-14
Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 33/203 (16%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+VTG G+G A L G +V++ E + ++ G + + AAD+++
Sbjct: 13 VVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL----GDRARFAAADVTDEA 65
Query: 143 AALDKIKTELEGHTIGILVNNVG---ANYTY----PMYLDEIPERDLWN-LINLNIATTT 194
A + T+ I+VN G A L + ++++N+ +
Sbjct: 66 AVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAA------FRKIVDINLVGSF 119
Query: 195 MLTKLVLPQMKER--------GRGAIVNVSSSS--EGQPWPLFTVYAASKIYIRYFSEAL 244
+ +L ++ + RG I+N +S + +GQ Y+ASK + + +
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQ--AAYSASKGGVVGMTLPI 177
Query: 245 RVEYQKYGITVQHIAPAFVSTKM 267
+ + I V IAP T +
Sbjct: 178 ARDLASHRIRVMTIAPGLFDTPL 200
Score = 33.4 bits (77), Expect = 0.12
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
VTG G+G A L G +V++ E + ++G
Sbjct: 14 VTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADLG 51
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 59.9 bits (146), Expect = 2e-10
Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 44/204 (21%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIA---ADMSE 140
+TG G+G A ELARRG +++ R K + A+ + Q ++ D+S
Sbjct: 21 ITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----AGQVEVRELDLQDLSS 76
Query: 141 GKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTM----L 196
+ D + +L+NN G M +P + I T + L
Sbjct: 77 VRRFADGVS------GADVLINNAGI-----MA---VPYALTVDGFESQIGTNHLGHFAL 122
Query: 197 TKLVLPQMKERGRGAIVNVSSS-------------SEGQPWPLFTVYAASKIYIRYFSEA 243
T L+LP++ +R +V VSS + + + Y+ SK+ F+
Sbjct: 123 TNLLLPRLTDR----VVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSE 178
Query: 244 L--RVEYQKYGITVQHIAPAFVST 265
L R+ + P + T
Sbjct: 179 LQRRLTAAGSPLRALAAHPGYSHT 202
Score = 47.2 bits (113), Expect = 5e-06
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+TG G+G A ELARRG +++ R K + A+ +
Sbjct: 21 ITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA 61
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 56.8 bits (136), Expect = 9e-09
Identities = 63/404 (15%), Positives = 117/404 (28%), Gaps = 111/404 (27%)
Query: 37 AKEIGMINIS---LIISNFPCVT---------QITIADAVEGLYSTKNQGLCKKFTGPMV 84
AK N+S L+ + F VT I++ L + + L K+
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD--- 312
Query: 85 TGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKAA 144
+ + +E+ TT+ + IIA + +G A
Sbjct: 313 -----------------------------CRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343
Query: 145 LD---KIKTELEGHTIGILVNNVGANYTYPMYLD-EI-PERDLWNLINLNIATTTMLTKL 199
D + + I +N + M+ + P + +I T + L
Sbjct: 344 WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP-------SAHIPTILL--SL 394
Query: 200 VLPQMKERGRGAIVN--VSSSSEGQPWPLFTVYAASKIYIRYFSEALRVEYQKYGITVQH 257
+ + + +VN S + T+ I Y +++E + H
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS----IPSIYLELKVKLENEYA----LH 446
Query: 258 IAPAFVSTKMNNFSYRVR----NKSFFVPDAEQYARSAV----STLGVTDTSTGFWVHGI 309
+ V Y + + P +QY S + + + T F
Sbjct: 447 R--SIVD------HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF----- 493
Query: 310 QAFFTNLCPLFLRVQL---GCIMNQTFR-EDYLNQKSRQIYVKYFT--EGLRIEYENSGL 363
+ F + FL ++ N + + L Q + Y Y + N+ L
Sbjct: 494 RMVFLDF--RFLEQKIRHDSTAWNASGSILNTLQQ--LKFYKPYICDNDPKYERLVNAIL 549
Query: 364 TFQLLSPG--LVSSKMTD------FNPSGQKSKLLSATPEQFAR 399
F L L+ SK TD + +Q R
Sbjct: 550 DF-LPKIEENLICSKYTDLLRIALMAEDEA---IFEEAHKQVQR 589
Score = 40.6 bits (94), Expect = 0.001
Identities = 31/216 (14%), Positives = 58/216 (26%), Gaps = 77/216 (35%)
Query: 242 EALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVSTLGVTDTS 301
E +Y +Y + AFV +F D + +S +S +
Sbjct: 10 ETGEHQY-QYKDILSVFEDAFV-------------DNFDCKDVQDMPKSILSKEEIDHI- 54
Query: 302 TGFWVHGIQAFFTNLCPLFLRVQLGCIMNQTFRE-DYLNQKSRQIYVKYFTEGLRIEYE- 359
+ ++ T R L K ++ K+ E LRI Y+
Sbjct: 55 ---------------------IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF 93
Query: 360 -NSGLTFQLLSPGLVSSKMTD-----FNPSGQ----------------KSKLLSATPEQF 397
S + + P +++ + +N Q + LL P +
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYN-DNQVFAKYNVSRLQPYLKLRQALLELRPAKN 152
Query: 398 --------------ARSAVKTLGVTDTTTG--YWLH 417
A + V +WL+
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188
Score = 38.3 bits (88), Expect = 0.005
Identities = 26/161 (16%), Positives = 52/161 (32%), Gaps = 37/161 (22%)
Query: 167 NYTY----PMYLDEIPERDLWNLINLNIATTTMLTKLVLP--QMKERGRGAIVNVSSSSE 220
Y Y ++ D + N + + K +L ++ I+ S +
Sbjct: 15 QYQYKDILSVFEDAFVD-------NFDCKDVQDMPKSILSKEEIDH-----IIM-SKDAV 61
Query: 221 GQPWPLFTVYAA--SKIYIRYFSEALRVEYQ--KYGITVQHIAPAFVSTKMNNFSYRVR- 275
LF + ++ ++ E LR+ Y+ I + P+ ++ R R
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI--EQRDRL 119
Query: 276 ---NKSF---FVPDAEQYA--RSAVSTLGVTDTSTGFWVHG 308
N+ F V + Y R A+ L + + G
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLEL---RPAKNVLIDG 157
Score = 29.1 bits (64), Expect = 3.4
Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 23 IVLISRTLEKLKKTAKE-IGMINISLIISNFPCVTQITIADAVEGLYSTKNQGLCK 77
I E+L + + I +LI S + + +I + E ++ ++ + +
Sbjct: 534 ICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted
open sheet structure, oxidoreductase; 1.90A
{Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4
PDB: 1lua_A*
Length = 287
Score = 54.9 bits (132), Expect = 1e-08
Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 14/112 (12%)
Query: 83 MVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGK 142
+V T +G A LA G +VL R L+K + A + V +
Sbjct: 123 VVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASR 182
Query: 143 AALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTT 194
A ++G + L+ +P+ N ++ I
Sbjct: 183 AEA------VKG--AHFVFTAGAIG------LELLPQAAWQNESSIEIVADY 220
Score = 45.3 bits (107), Expect = 2e-05
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
V T +G A LA G +VL R L+K + A +
Sbjct: 124 VLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVN 164
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase,
oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora
erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Length = 486
Score = 40.1 bits (94), Expect = 0.001
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 84 VTGCTDGIGQAYAHELARRGI-NIVLISRT---LEKLKKTAKEIETTHGVQTKIIAADMS 139
VTG T G+G A LARRG +++L+SR+ + + E+E G +T + A D++
Sbjct: 231 VTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVT 289
Query: 140 EGKA---ALDKIKTE--LEG--HTIGIL 160
+ ++ L I + L H L
Sbjct: 290 DRESVRELLGGIGDDVPLSAVFHAAATL 317
Score = 34.3 bits (79), Expect = 0.082
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 1 VTGCTDGIGQAYAHELARRGI-NIVLISRT 29
VTG T G+G A LARRG +++L+SR+
Sbjct: 231 VTGGTGGVGGQIARWLARRGAPHLLLVSRS 260
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH,
oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora
spinosa}
Length = 795
Score = 40.1 bits (94), Expect = 0.001
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 84 VTGCTDGIGQAYAHELA-RRGI-NIVLISR---TLEKLKKTAKEIETTHGVQTKIIAADM 138
VTG T +G A L RG+ N+VL+SR + ++ +G + + A D+
Sbjct: 535 VTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDV 593
Query: 139 SEG---KAALDKIKTE 151
++ L I E
Sbjct: 594 ADRETLAKVLASIPDE 609
Score = 30.8 bits (70), Expect = 1.1
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 1 VTGCTDGIGQAYAHELA-RRGI-NIVLISR 28
VTG T +G A L RG+ N+VL+SR
Sbjct: 535 VTGGTGALGAEVARHLVIERGVRNLVLVSR 564
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest
center for structu genomics, MCSG, unknown function;
HET: MNB; 2.30A {Shigella flexneri 2A}
Length = 236
Score = 38.2 bits (89), Expect = 0.003
Identities = 31/174 (17%), Positives = 49/174 (28%), Gaps = 42/174 (24%)
Query: 79 FTGPM----VTGCTDGIGQAYAHELA-RRGINIVLISRTLEKLKKTAKEIETTHGVQTKI 133
F G M + G I + ++LA ++ I L +R K+ K Q I
Sbjct: 19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPT-----NSQ--I 71
Query: 134 IAADMSEGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATT 193
I D+ AAL + ++G I NL
Sbjct: 72 IMGDVLN-HAALKQA---MQGQDIVYA--------------------------NLTGEDL 101
Query: 194 TMLTKLVLPQMKERGRGAIVNVSSSSEGQPWPLFTVYAASKIYIRYFSEALRVE 247
+ V+ MK ++ V S P V + + R
Sbjct: 102 DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAA 155
Score = 27.8 bits (62), Expect = 5.4
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 1 VTGCTDGIGQAYAHELA-RRGINIVLISRTLEKLKKTAKE 39
+ G I + ++LA ++ I L +R K+ K
Sbjct: 28 ILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPT 67
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 38.9 bits (90), Expect = 0.004
Identities = 38/235 (16%), Positives = 69/235 (29%), Gaps = 63/235 (26%)
Query: 16 LARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITIADAVEGLYSTKNQGL 75
L+ + + + K + ISL+ N + ++ + LY GL
Sbjct: 339 LSISNLTQEQVQDYVNKTNSHLPAGKQVEISLV--NGA--KNLVVSGPPQSLY-----GL 389
Query: 76 CKKFTGPMVTGCTDGIGQAYAHELARRGINIVLISRTL-------EKLKKTAKEIETTHG 128
G+ Q+ + R + +R L L A +
Sbjct: 390 NLTLRK---AKAPSGLDQSRI-PFSERKLKFS--NRFLPVASPFHSHLLVPASD------ 437
Query: 129 VQTKIIAADMSEGKAALDKIKTELEGHTIGILVNNV--GANYTYPMYLDEIPER--DL-- 182
+I D+ + + + I I V + G++ + I ER D
Sbjct: 438 ----LINKDLVKNNVSFN-------AKDIQIPVYDTFDGSDLR--VLSGSISERIVDCII 484
Query: 183 -----WNLINLNIAT---------TTMLTKLVLPQMKERGRGAIVNVSSSSEGQP 223
W AT + L L + K+ G G V V+ + + P
Sbjct: 485 RLPVKWETTTQFKATHILDFGPGGASGLGVLTH-RNKD-GTGVRVIVAGTLDINP 537
Score = 29.2 bits (65), Expect = 3.7
Identities = 7/39 (17%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 3 GCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
G G+G G+ +++ TL+ + G
Sbjct: 507 GGASGLGVLTHRNKDGTGVRVIVAG-TLD--INPDDDYG 542
>3dtt_A NADP oxidoreductase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Length = 245
Score = 37.4 bits (86), Expect = 0.005
Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 8 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMIN--ISLIISNFPCVTQITIADAVE 65
+G+ A LA G + + +R + A+ M S + P V AD
Sbjct: 30 VGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAA 89
Query: 66 G 66
G
Sbjct: 90 G 90
Score = 34.3 bits (78), Expect = 0.051
Identities = 7/47 (14%), Positives = 17/47 (36%)
Query: 91 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAAD 137
+G+ A LA G + + +R + A+ ++ +
Sbjct: 30 VGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH 76
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme,
megasynthase, fatty acid synthesis; 3.2A {Sus scrofa}
PDB: 2vz9_A*
Length = 2512
Score = 38.3 bits (89), Expect = 0.006
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 83 MVTGCTDGIGQAYAHELARRGI-NIVLISRTLEKLKKTAKEIE--TTHGVQTKIIAADMS 139
++TG G G A L RG +VL SR+ + A+++ GVQ + ++ S
Sbjct: 1888 VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNAS 1947
Query: 140 EGKAA---LDKIKTE--LEG--HTIGIL 160
A + + + G + +L
Sbjct: 1948 SLDGARSLITEATQLGPVGGVFNLAMVL 1975
Score = 32.9 bits (75), Expect = 0.22
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1 VTGCTDGIGQAYAHELARRGI-NIVLISRT 29
+TG G G A L RG +VL SR+
Sbjct: 1889 ITGGLGGFGLQLAQWLRLRGAQKLVLTSRS 1918
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces
nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Length = 496
Score = 37.8 bits (88), Expect = 0.006
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 84 VTGCTDGIGQAYAHELARRGI-NIVLISRT---LEKLKKTAKEIETTHGVQTKIIAADMS 139
VTG T GIG A LA +G ++VL SR + E+E GV+ I A D +
Sbjct: 244 VTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDAA 302
Query: 140 EGKA---ALDKIKTE--LEG--HTIGIL 160
+ +A L ++ + L H+ G+
Sbjct: 303 DREALAALLAELPEDAPLTAVFHSAGVA 330
Score = 32.0 bits (73), Expect = 0.37
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1 VTGCTDGIGQAYAHELARRGI-NIVLISRT 29
VTG T GIG A LA +G ++VL SR
Sbjct: 244 VTGGTGGIGGRVARRLAEQGAAHLVLTSRR 273
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate
pathway, dehydrogenase, oxidoreductase; 2.00A
{Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A*
1e5q_A
Length = 450
Score = 37.2 bits (85), Expect = 0.009
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 90 GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQ 130
+ + L GI + + RTLE KK + ++ + +
Sbjct: 13 FVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPIS 53
Score = 34.5 bits (78), Expect = 0.054
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 7 GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMIN 44
+ + L GI + + RTLE KK + +
Sbjct: 13 FVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHST 50
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima
dehydrogenase; shikimate, NADPH, dehydroshikimate,
bifunctional enzyme; HET: DHK TLA NAP; 1.78A
{Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Length = 523
Score = 37.0 bits (86), Expect = 0.011
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 7 GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISL 47
G G+A A+ +G +V+ +RT E+ + A+ IG +SL
Sbjct: 374 GAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSL 414
Score = 35.1 bits (81), Expect = 0.043
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 90 GIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 123
G G+A A+ +G +V+ +RT E+ + A+ I
Sbjct: 374 GAGKALAYGAKEKGAKVVIANRTYERALELAEAI 407
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold,
transcriptional regulation, short chain dehyd reductase,
NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2
PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A*
2vuu_A*
Length = 352
Score = 36.3 bits (84), Expect = 0.014
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
V G T G + A G ++ +L+ L A+E++ V + +
Sbjct: 10 VVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAIPNVT--LFQGPLLNNVP 65
Query: 144 ALDK 147
+D
Sbjct: 66 LMDT 69
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase,
epimerization, oxidoreductase; 1.88A {Streptomyces
venezuelae}
Length = 525
Score = 36.3 bits (84), Expect = 0.016
Identities = 15/98 (15%), Positives = 28/98 (28%), Gaps = 21/98 (21%)
Query: 84 VTGCTDGIGQAYAHELARRG-INIVLISRTLEKLKKTAKEIE-------------TTHGV 129
VTG + A LAR G +++L + G
Sbjct: 256 VTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGA 315
Query: 130 QTKIIAADMSEGKA---ALDKIKTE--LEG--HTIGIL 160
++ D+++ +A L + L H +
Sbjct: 316 TATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTV 353
Score = 32.1 bits (73), Expect = 0.42
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 1 VTGCTDGIGQAYAHELARRG-INIVLISRT 29
VTG + A LAR G +++L +
Sbjct: 256 VTGAEEPAAAEAARRLARDGAGHLLLHTTP 285
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2;
short-chain dehydrogenase/reductase, rossman fold; 1.95A
{Streptomyces fradiae}
Length = 511
Score = 35.9 bits (83), Expect = 0.020
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 84 VTGCTDGIGQAYAHELARRGI-NIVLISRTLEKLKKTAKEIE--TTHGVQTKIIAADMSE 140
+TG IG+ A LA G +VL SR + A+ E HG + A D++E
Sbjct: 264 ITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE 323
Query: 141 GKAALDKIKTE--LEG--HTIGIL 160
+ AL + T HT GIL
Sbjct: 324 -RDALAALVTAYPPNAVFHTAGIL 346
Score = 32.1 bits (73), Expect = 0.41
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1 VTGCTDGIGQAYAHELARRGI-NIVLISRT 29
+TG IG+ A LA G +VL SR
Sbjct: 264 ITGGMGAIGRRLARRLAAEGAERLVLTSRR 293
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent
epimerase/dehydratase, LMR162, NESG, structural
genomics, PSI-2; 2.73A {Listeria monocytogenes}
Length = 221
Score = 34.9 bits (80), Expect = 0.026
Identities = 18/142 (12%), Positives = 37/142 (26%), Gaps = 35/142 (24%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+ G T G E RG + I R K+ +T K+I I+ D
Sbjct: 5 IIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDIN--------ILQKD------ 50
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
D ++L + + + + ++
Sbjct: 51 IFDLTLSDLSDQNVVVDAYGISPDEA---------------------EKHVTSLDHLISV 89
Query: 204 MKERGRGAIVNVSSSSEGQPWP 225
+ ++ V ++ Q
Sbjct: 90 LNGTVSPRLLVVGGAASLQIDE 111
Score = 29.9 bits (67), Expect = 1.2
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEI 40
+ G T G E RG + I R K+ +T K+I
Sbjct: 5 IIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI 44
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold,
structural genomics; HET: NAP F42; 1.65A {Archaeoglobus
fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Length = 212
Score = 34.8 bits (79), Expect = 0.033
Identities = 24/109 (22%), Positives = 36/109 (33%), Gaps = 12/109 (11%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHG------------VQT 131
+ G T +G+ A LA G IV+ SR EK + A E G +
Sbjct: 5 LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEA 64
Query: 132 KIIAADMSEGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPER 180
IA + A+D + I+V+ + ER
Sbjct: 65 CDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSER 113
Score = 34.4 bits (78), Expect = 0.043
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
+ G T +G+ A LA G IV+ SR EK + A E
Sbjct: 5 LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYR 45
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann
fold, transport, cell cycle, transferrin, flavoprotein,
alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB:
2vq3_A*
Length = 215
Score = 34.6 bits (79), Expect = 0.035
Identities = 12/98 (12%), Positives = 31/98 (31%), Gaps = 14/98 (14%)
Query: 80 TGPMVTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAAD-- 137
+G ++ A L G +V+ SR ++ + + + + +
Sbjct: 36 SGDF--------ARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVI 87
Query: 138 ----MSEGKAALDKIKTELEGHTIGILVNNVGANYTYP 171
E ++L + +L G + + N +
Sbjct: 88 FVAVFREHYSSLCSLSDQLAGKILVDVSNPTEQEHLQH 125
Score = 31.1 bits (70), Expect = 0.45
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 8 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
++ A L G +V+ SR ++ +
Sbjct: 39 FARSLATRLVGSGFKVVVGSRNPKRTARLFPSAA 72
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.8 bits (76), Expect = 0.049
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 8/37 (21%)
Query: 117 KKTAKEIETTHGVQTKIIAADMSEGKAALDKIKTELE 153
K+ K+++ + K+ A D + AL IK +E
Sbjct: 19 KQALKKLQAS----LKLYADDSA---PAL-AIKATME 47
>3ic5_A Putative saccharopine dehydrogenase; structural genomics,
APC63807.2, N-terminal domain, saccharo dehydrogenase,
PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Length = 118
Score = 32.9 bits (75), Expect = 0.049
Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 7/61 (11%)
Query: 90 GIGQAYAHELARRG-INIVLISRTLEKLKKTAKEIETTHGVQTKII-AADMSEGKAALDK 147
IGQ A L ++ + L L + GV TK + A D + AL
Sbjct: 15 KIGQMIAALLKTSSNYSVTVADHDLAALAVLNRM-----GVATKQVDAKDEAGLAKALGG 69
Query: 148 I 148
Sbjct: 70 F 70
Score = 30.9 bits (70), Expect = 0.27
Identities = 7/34 (20%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 7 GIGQAYAHELARRG-INIVLISRTLEKLKKTAKE 39
IGQ A L ++ + L L +
Sbjct: 15 KIGQMIAALLKTSSNYSVTVADHDLAALAVLNRM 48
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design,
oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex
aeolicus} PDB: 2hk8_A 2hk7_A
Length = 275
Score = 34.0 bits (79), Expect = 0.061
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 7 GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINIS 46
G +A + L + G + L +RT EK K A++ + ++
Sbjct: 139 GASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVN 178
Score = 32.9 bits (76), Expect = 0.14
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 90 GIGQAYAHELARRGINIVLISRTLEKLKKTAKE--IETTHGVQTKIIAADM 138
G +A + L + G + L +RT EK K A++ +E + + I +
Sbjct: 139 GASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQV 189
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2,
protein structure initiative, MI center for structural
genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma
volcanium}
Length = 144
Score = 32.5 bits (75), Expect = 0.11
Identities = 2/32 (6%), Positives = 13/32 (40%)
Query: 16 LARRGINIVLISRTLEKLKKTAKEIGMINISL 47
+ + + R ++ ++ A++ + +
Sbjct: 40 FSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLI 71
Score = 29.4 bits (67), Expect = 1.0
Identities = 3/26 (11%), Positives = 12/26 (46%)
Query: 99 LARRGINIVLISRTLEKLKKTAKEIE 124
+ + + R ++ ++ A++ E
Sbjct: 40 FSYPQYKVTVAGRNIDHVRAFAEKYE 65
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation,
flavin reductase, diaphorase, green HAEM binding
protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2
PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Length = 206
Score = 32.7 bits (75), Expect = 0.13
Identities = 21/166 (12%), Positives = 46/166 (27%), Gaps = 37/166 (22%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+ G T G + + G + ++ R +L ++ D+ + A
Sbjct: 8 IFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR-----PAH--VVVGDVLQ-AA 59
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
+DK + G ++ +G P + + ++
Sbjct: 60 DVDKT---VAGQD--AVIVLLGTRNDLS------PTTVMSE-----------GARNIVAA 97
Query: 204 MKERGRGAIVNVSSS----SEGQPWPLFTVYAASKIYIRYFSEALR 245
MK G +V +S+ + P + LR
Sbjct: 98 MKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDH---IRMHKVLR 140
Score = 30.4 bits (69), Expect = 0.93
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLK 34
+ G T G + + G + ++ R +L
Sbjct: 8 IFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP 41
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics,
PSI-2, protein structure initiative; 1.40A {Lactococcus
lactis subsp}
Length = 219
Score = 32.3 bits (74), Expect = 0.19
Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 39/160 (24%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+ G T +G++ L+ I +R +E++ + K + D+
Sbjct: 5 IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN---------VKAVHFDVDWTPE 55
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
+ K L G ++N G+ + +D ++
Sbjct: 56 EMAKQ---LHGMD--AIINVSGSGGKSLLKVD------------------LYGAVKLMQA 92
Query: 204 MKERGRGAIVNVSSSSEGQPWP-------LFTVYAASKIY 236
++ + +S+ QP Y +K +
Sbjct: 93 AEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHF 132
Score = 31.9 bits (73), Expect = 0.29
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKK 35
+ G T +G++ L+ I +R +E++ +
Sbjct: 5 IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ 39
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET:
LYS; 2.54A {Synechocystis}
Length = 600
Score = 33.0 bits (76), Expect = 0.23
Identities = 28/158 (17%), Positives = 48/158 (30%), Gaps = 31/158 (19%)
Query: 16 LARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITIADAVEGLYSTKNQGL 75
LA G+NI +IS T E + +S +I I G+ + +
Sbjct: 379 LADVGVNIEMIS-TSE-----------VKVSCVIDQRDADRAIAALSNAFGVTLSPPKNQ 426
Query: 76 CKKFTGPMVTGCT--------------DGIGQAYA--HELARRGINIVLISRTLEKLKKT 119
P V G D G A LA I++ +I ++ +
Sbjct: 427 TDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQR--CRI 484
Query: 120 AKEIETTHGVQTKIIAADMSEGKAALDKIKTELEGHTI 157
+ + D S+ +A L + + I
Sbjct: 485 NQGTPCRDIAFM-VAEGDSSQAEAILQPLIKDWLDAAI 521
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 32.9 bits (75), Expect = 0.24
Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 36/177 (20%)
Query: 1 VTGCTDG-IGQAYAHELARRGIN-IVLISR----TLEKLKKTAKEIGMINISLIISNFPC 54
+TG G IG L + G +V SR + + + G +LI+ F
Sbjct: 481 ITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQ 540
Query: 55 VTQITIADAVEGLYST-KNQGLCKKFT-------GPMVTGCTDGIGQAYAHELARRGINI 106
++ + +E +Y T KN GL P + I E A R I
Sbjct: 541 GSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSK--SEFAHR---I 595
Query: 107 VLISRTLEKLKKTAKEIETTHGVQTK-------------IIAAD--MSEGKAALDKI 148
+L + + ++ K+ ++ G++T+ D SE K +L+ +
Sbjct: 596 MLTN--ILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGGDGMYSESKLSLETL 650
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370,
Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2;
2.00A {Bacteroides thetaiotaomicron}
Length = 227
Score = 32.0 bits (73), Expect = 0.25
Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 30/142 (21%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+ G + +G A +E RG + + R EK+K + ++ + AD+S
Sbjct: 9 LIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLK--------VKKADVSSL-- 58
Query: 144 ALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVLPQ 203
D++ +G +++ + P D T + ++
Sbjct: 59 --DEVCEVCKGAD--AVISAFNPGWNNPDIYD----------------ETIKVYLTIIDG 98
Query: 204 MKERGRGAIVNVSSSSEGQPWP 225
+K+ G + V + P
Sbjct: 99 VKKAGVNRFLMVGGAGSLFIAP 120
Score = 29.7 bits (67), Expect = 1.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKK 35
+ G + +G A +E RG + + R EK+K
Sbjct: 9 LIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI 43
>1xq6_A Unknown protein; structural genomics, protein structure initiative,
CESG, AT5G02240, NADP, center for eukaryotic structural
genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP:
c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Length = 253
Score = 32.1 bits (73), Expect = 0.26
Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Query: 84 VTGCTDGIGQAYAHELARRG--INIVLISRTLEKLKKTAKEIETTHG 128
VTG + GQ +L + R+ + +K E + G
Sbjct: 9 VTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIG 55
Score = 28.3 bits (63), Expect = 4.8
Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 1 VTGCTDGIGQAYAHELARRG--INIVLISRTLEKLKKTAKEI 40
VTG + GQ +L + R+ + +K E
Sbjct: 9 VTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEA 50
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET:
NAP; 2.20A {Rattus norvegicus}
Length = 201
Score = 31.6 bits (71), Expect = 0.29
Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 3/89 (3%)
Query: 91 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKAALDKIKT 150
G++ ++ + G ++V SR + + E + A+ A+ +
Sbjct: 30 FGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEA---ASRSDVIVLAVHREHY 86
Query: 151 ELEGHTIGILVNNVGANYTYPMYLDEIPE 179
+ L V + + +++ PE
Sbjct: 87 DFLAELADSLKGRVLIDVSNNQKMNQYPE 115
Score = 30.0 bits (67), Expect = 1.0
Identities = 12/108 (11%), Positives = 34/108 (31%), Gaps = 5/108 (4%)
Query: 8 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITIADAVEGL 67
G++ ++ + G ++V SR + + ++ S S + + + L
Sbjct: 30 FGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHREHYDFL 89
Query: 68 YSTKNQGLCKKFTGPMVTGCTDGIGQAYAHELARRGINIVLISRTLEK 115
L G ++ ++ E + ++ + K
Sbjct: 90 -----AELADSLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGAHVVK 132
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein;
structural genomics, oxidoreductase, amino-acid
biosynthesis; 2.10A {Clostridium acetobutylicum}
Length = 282
Score = 31.7 bits (73), Expect = 0.37
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 7 GIGQAYAHELARRGI-NIVLISRTLEKLKKTAKEIGMINI 45
G +A L +I +++R EK + E +I+
Sbjct: 132 GAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISY 171
Score = 31.0 bits (71), Expect = 0.65
Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Query: 90 GIGQAYAHELARRGI-NIVLISRTLEKLKKTAKEIETTHGVQTKIIAADM 138
G +A L +I +++R EK + E + + + D+
Sbjct: 132 GAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSNLKGDV 181
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain
dehydrogenase reductase, flavonoi oxidoreductase; HET:
NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Length = 346
Score = 31.5 bits (71), Expect = 0.44
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKA 143
+ G T IGQ A +++R + AK + I+ ++E +
Sbjct: 15 IAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE-QE 73
Query: 144 ALDKIKTELEGHTIGILVNNVGA 166
A++KI L+ H I I+V+ VG
Sbjct: 74 AMEKI---LKEHEIDIVVSTVGG 93
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta
protein., structural genomics, PSI-2, protein STR
initiative; 1.60A {Staphylococcus aureus subsp}
Length = 289
Score = 31.5 bits (72), Expect = 0.45
Identities = 8/47 (17%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 84 VTGCTDGIGQAYAHELARRGI-NIVLISRTLEKLKKTAKE-IETTHG 128
+TG T +G ++ I + + R +EK+ + +
Sbjct: 5 LTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQL 51
Score = 31.1 bits (71), Expect = 0.65
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 1 VTGCTDGIGQAYAHELARRGI-NIVLISRTLEKLKKTA 37
+TG T +G ++ I + + R +EK+
Sbjct: 5 LTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW 42
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics,
PSI-2, protein ST initiative; 1.95A {Haemophilus
influenzae}
Length = 286
Score = 31.5 bits (71), Expect = 0.51
Identities = 8/58 (13%), Positives = 19/58 (32%), Gaps = 10/58 (17%)
Query: 86 GCTDGIGQAYAHELARRGINIVLISRT---LEKLKKTAKEIETTHGVQTKIIAADMSE 140
GC G + L+ G ++ + L +T ++ + D++
Sbjct: 128 GCGQGR---NSLYLSLLGYDVTSWDHNENSIAFLNETKEK----ENLNISTALYDINA 178
Score = 28.4 bits (63), Expect = 4.9
Identities = 7/42 (16%), Positives = 15/42 (35%), Gaps = 6/42 (14%)
Query: 3 GCTDGIGQAYAHELARRGINIVLISRT---LEKLKKTAKEIG 41
GC G + L+ G ++ + L +T ++
Sbjct: 128 GCGQGR---NSLYLSLLGYDVTSWDHNENSIAFLNETKEKEN 166
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural
genomics, APC7755, NADP, P protein structure
initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Length = 236
Score = 31.2 bits (71), Expect = 0.52
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKK 35
V G + + EL +G V + R E+ +
Sbjct: 26 VVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60
Score = 31.2 bits (71), Expect = 0.52
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKLKK 118
V G + + EL +G V + R E+ +
Sbjct: 26 VVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET:
NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A
2vrc_D
Length = 287
Score = 31.1 bits (71), Expect = 0.62
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 84 VTGCTDGIGQAYAHELARR--GINIVLISRTLEKLKKTAKE-IETTHG 128
VTG T +G L ++ I+ I R +EK A + +E HG
Sbjct: 5 VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHG 52
Score = 29.9 bits (68), Expect = 1.2
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1 VTGCTDGIGQAYAHELARR--GINIVLISRTLEKLKKTAKE 39
VTG T +G L ++ I+ I R +EK A +
Sbjct: 5 VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQ 45
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction,
structural genomics, NPPSFA; 2.25A {Geobacillus
kaustophilus}
Length = 297
Score = 31.0 bits (71), Expect = 0.65
Identities = 8/43 (18%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 7 GIGQAYAHELARRGI-NIVLISRTLEKLKKTAKEIGMINISLI 48
G + L I + +RT+EK ++ +E +
Sbjct: 151 GGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF 193
Score = 28.3 bits (64), Expect = 4.9
Identities = 12/74 (16%), Positives = 28/74 (37%), Gaps = 15/74 (20%)
Query: 90 GIGQAYAHELARRGI-NIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKAALDKI 148
G + L I + +RT+EK ++ +E + + + ++E + L +
Sbjct: 151 GGARGIYFSLLSTAAERIDMANRTVEKAERLVREGD-----ERRSAYFSLAEAETRLAE- 204
Query: 149 KTELEGHTIGILVN 162
I++N
Sbjct: 205 --------YDIIIN 210
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex,
oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis}
SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Length = 382
Score = 31.0 bits (71), Expect = 0.79
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 7 GIGQAYAHELARRGINIVLISR 28
IG A A+ LA+ N L
Sbjct: 27 IIGSAIAYYLAKENKNTALFES 48
Score = 31.0 bits (71), Expect = 0.79
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 90 GIGQAYAHELARRGINIVLISR 111
IG A A+ LA+ N L
Sbjct: 27 IIGSAIAYYLAKENKNTALFES 48
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding,
fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Length = 422
Score = 30.9 bits (69), Expect = 0.83
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 16/110 (14%)
Query: 83 MVTGCTDGIGQAYAHELA-RRGINIVLISRTLEKLKK-----------TAKEIETTHGVQ 130
+V G + G G A A G + + + + G+
Sbjct: 65 LVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLY 124
Query: 131 TKII---AADMSEGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEI 177
+K I A + ++ IK G + ++V ++ + E+
Sbjct: 125 SKSINGDAFSDAARAQVIELIK-TEMGGQVDLVVYSLASPVRKLPGSGEV 173
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural
genomics, PSI-2, protein structure initiative; HET:
NDP; 1.78A {Lactobacillus casei atcc 334}
Length = 224
Score = 30.4 bits (68), Expect = 0.92
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEKL 33
V G T G A E RRG ++ + R +K
Sbjct: 5 VLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA 37
Score = 30.4 bits (68), Expect = 0.92
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 84 VTGCTDGIGQAYAHELARRGINIVLISRTLEKL 116
V G T G A E RRG ++ + R +K
Sbjct: 5 VLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA 37
>1b25_A Protein (formaldehyde ferredoxin oxidoreductase); MOCO,
tungstoenzyme, tungsten containing protein, hypertherm
oxidoreductase; HET: PTT; 1.85A {Pyrococcus furiosus}
SCOP: a.110.1.1 d.152.1.1 PDB: 1b4n_A*
Length = 619
Score = 30.8 bits (69), Expect = 0.93
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 9/90 (10%)
Query: 127 HGVQTKIIAADMSEGKAALDKIKTELEGHTIGILVNNVGANYTYPMYLDEIPERDLWNLI 186
+G +I+ +++ G+ + + E+ IG G + +E + +
Sbjct: 2 YGWWGRILRVNLTTGEVKVQEYPEEVAKKFIG------GRGLAAWILWNEARGVEPLSPE 55
Query: 187 NLNIATTTMLTKLVLPQMKERGRGAIVNVS 216
N I L P G+ + S
Sbjct: 56 NKLIFAAGPFNGLPTPSG---GKLVVAAKS 82
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A
{Escherichia coli} PDB: 2zcv_A*
Length = 286
Score = 29.9 bits (68), Expect = 1.3
Identities = 12/48 (25%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Query: 84 VTGCTDGIGQAYAHELARR--GINIVLISRTLEKLKKTAKE-IETTHG 128
+TG T +G L + IV I R K + A + I
Sbjct: 4 ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQA 51
Score = 29.6 bits (67), Expect = 1.8
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 1 VTGCTDGIGQAYAHELARR--GINIVLISRTLEKLKKTAKE 39
+TG T +G L + IV I R K + A +
Sbjct: 4 ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQ 44
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural
genomics, NPPSFA, Na project on protein structural and
functional analyses; HET: SKM; 1.65A {Thermus
thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Length = 263
Score = 29.8 bits (68), Expect = 1.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 7 GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
G G+A A L G+ + + +RT ++ A+E G
Sbjct: 126 GAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG 160
Score = 29.4 bits (67), Expect = 1.8
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 90 GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADM 138
G G+A A L G+ + + +RT ++ A+E K A +
Sbjct: 126 GAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKAREARL 174
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold,
amino-acid biosynthesis, amino acid biosynthesis, NADP,
oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB:
3doo_A*
Length = 277
Score = 29.4 bits (67), Expect = 1.8
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 11 AYAHELARRGI-NIVLISRTLEKLKKTAKEIGMINIS 46
A+EL + + + +RT+ + + I IN+S
Sbjct: 131 GIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLS 167
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics,
putative 2-dehydropantoate 2-reductase, protein
structure initiative; 2.30A {Staphylococcus aureus
subsp}
Length = 294
Score = 29.5 bits (67), Expect = 2.0
Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Query: 91 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKAALD 146
+G A+EL + + LI R + + H I+ + D
Sbjct: 13 VGTTIAYELQQSLPHTTLIGRHAKTI----TYYTVPHAPAQDIVVKGYEDVTNTFD 64
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding,
biotin, disease mutation, gluconeogenesis, ligase, lipid
synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens}
PDB: 3bg9_A
Length = 718
Score = 29.6 bits (67), Expect = 2.1
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 382 PSGQKSKLLSATPEQFAR--SAVKTLGVTDTT 411
P+G + LL PE FAR L + DTT
Sbjct: 78 PAGFRDILLREGPEGFARAVRNHPGLLLMDTT 109
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium
channel, BK channel, rossmann fold, membrane protein;
2.40A {Escherichia coli} SCOP: c.2.1.9
Length = 153
Score = 28.1 bits (63), Expect = 2.8
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 8 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLII 49
+ +L +RG N+ +IS E K ++ N +I
Sbjct: 14 LAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIP 55
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C,
northeast structural genomics consortium, NESG, C
PSI-biology; 2.00A {Corynebacterium glutamicum}
Length = 516
Score = 29.3 bits (66), Expect = 3.1
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 82 PM---VTGCTDGIGQAYAHELARRGINIVLISRTLEK 115
P+ +TG +G+A +L G ++ + R K
Sbjct: 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK 183
Score = 28.1 bits (63), Expect = 6.2
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 1 VTGCTDGIGQAYAHELARRGINIVLISRTLEK 32
+TG +G+A +L G ++ + R K
Sbjct: 152 ITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK 183
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A
{Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB:
1p74_A*
Length = 272
Score = 28.6 bits (65), Expect = 3.9
Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 15/67 (22%)
Query: 96 AHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKAALDKIKTELEGH 155
L + NIVL +RT K KE+ I A M +
Sbjct: 135 LLPLLQAQQNIVLANRTFSK----TKELAERFQPYGNIQAVSMD-----------SIPLQ 179
Query: 156 TIGILVN 162
T +++N
Sbjct: 180 TYDLVIN 186
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding,
transcription, transcription regulator, transcription
regulation; 3.20A {Klebsiella pneumoniae}
Length = 315
Score = 28.6 bits (64), Expect = 3.9
Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 24/186 (12%)
Query: 6 DGIGQAYAHELARR-GINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQITIADAV 64
+ QA ++AR GI ISR L++ +E G++ I++ N+ + + +
Sbjct: 20 QDMTQA---QIARELGIYRTTISRLLKR----GREQGIVTIAI---NYDYNENLWLEQQL 69
Query: 65 EGLYSTKNQGLCKKFTGPMVTGCTDGIGQAYAHELAR--RGINIVLIS--RTLEKLKKTA 120
+ + K + G + +GQ A + R +I+ S R + L +
Sbjct: 70 KQKFGLKE-AVVASSDGLLEEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENL 128
Query: 121 KEIETTHGVQTKIIAADMSEGKAALDKIKTELEGHTIGILVNNVGANYTY---PMYLDEI 177
+ + V I S + + + A P LD
Sbjct: 129 PQRSQSRQVICVPIIGGPSGKLESRYHV-----NTLTYGAAARLKAESHLADFPALLDNP 183
Query: 178 PERDLW 183
R+
Sbjct: 184 LIRNGI 189
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific
opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter
SP} SCOP: a.100.1.5 c.2.1.6
Length = 359
Score = 28.5 bits (63), Expect = 4.0
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 91 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQT 131
G A+A LA +G +++ ++ KEI+ +
Sbjct: 15 GGHAFAAYLALKGQSVLAWDIDAQR----IKEIQDRGAIIA 51
Score = 27.7 bits (61), Expect = 7.4
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 8 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQIT--IADAVE 65
G A+A LA +G +++ +++K+ +I ++ +T I AV+
Sbjct: 15 GGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK 74
Query: 66 G 66
Sbjct: 75 D 75
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein
structure initiative; HET: NAP; 2.35A
{Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Length = 287
Score = 27.9 bits (63), Expect = 5.5
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 90 GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKAALDKIK 149
G +A A ELA+ NI++ +RT+EK + AKEI + +
Sbjct: 138 GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEE--------VKFSGLD 188
Query: 150 TELEGHTIGILVN 162
+L+G + I++N
Sbjct: 189 VDLDG--VDIIIN 199
Score = 27.9 bits (63), Expect = 6.3
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 7 GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIG 41
G +A A ELA+ NI++ +RT+EK + AKEI
Sbjct: 138 GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIA 171
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A
{Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A*
3t8w_A*
Length = 528
Score = 28.2 bits (63), Expect = 5.9
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 11/120 (9%)
Query: 106 IVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKAALDKIKTELEGHTIGILVNNVG 165
+ T E+ K T K + + + + K ++K + G +
Sbjct: 159 LFYEYMTDERFKSTDKNVNMEYIKHLGVYINNADTYKEEVEKARVYYFGTYYASQLIAAP 218
Query: 166 ANYTYPMYLDEIPERDLWNLINLNIATTTMLTKLVL--PQMKERGRGAIVNVSSSSEGQP 223
+NY P+ L +A L +L +++E GA ++V S
Sbjct: 219 SNYCNPVSLSNAAVE---------LAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPN 269
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating
complex, structural GEN PSI-2-2, protein structure
initiative; HET: AMP; 3.45A {Thermotoga maritima}
Length = 218
Score = 27.5 bits (62), Expect = 6.0
Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 91 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIETT--HG 128
A + R +V+I++ E ++ AK+++ T HG
Sbjct: 11 TAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHG 50
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A
{Thermotoga maritima}
Length = 253
Score = 27.9 bits (63), Expect = 6.6
Identities = 7/35 (20%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 13 AHELARRGI-NIVLISRTLEKLKKTAKEIGMINIS 46
+ L + G+ +I +++RT+E+ K + + ++
Sbjct: 124 IYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLD 158
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607;
structural genomics, PSI, protein structure initiative;
1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Length = 271
Score = 27.9 bits (63), Expect = 6.7
Identities = 7/50 (14%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 90 GIGQAYAHELARRGI-NIVLISRTLEKLKKTAKEIETTHGVQTKIIAADM 138
G+ +A G + + +R ++ + A + + AD+
Sbjct: 129 GMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLENQQADI 178
Score = 27.5 bits (62), Expect = 7.2
Identities = 7/40 (17%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 7 GIGQAYAHELARRGI-NIVLISRTLEKLKKTAKEIGMINI 45
G+ +A G + + +R ++ + A G I
Sbjct: 129 GMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI 168
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis,
merohedral twinning, enzyme mechanism, hydroxylase,
flavoprotein; HET: FAD VAK; 2.49A {Streptomyces
purpurascens}
Length = 535
Score = 28.1 bits (63), Expect = 7.1
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 9 GQAYAHELARRGINIVLISR 28
G + A LAR+G+ ++++ R
Sbjct: 17 GLSTAMFLARQGVRVLVVER 36
Score = 28.1 bits (63), Expect = 7.1
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 92 GQAYAHELARRGINIVLISR 111
G + A LAR+G+ ++++ R
Sbjct: 17 GLSTAMFLARQGVRVLVVER 36
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft
separation, oxidoreductase; HET: NAP; 1.50A {Escherichia
coli} SCOP: c.2.1.7 c.58.1.5
Length = 271
Score = 27.5 bits (62), Expect = 7.2
Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 15/67 (22%)
Query: 96 AHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKAALDKIKTELEGH 155
L + + +RT+ + A+E+ I A M ELEGH
Sbjct: 135 LLPLLSLDCAVTITNRTVSR----AEELAKLFAHTGSIQALSMD-----------ELEGH 179
Query: 156 TIGILVN 162
+++N
Sbjct: 180 EFDLIIN 186
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics,
PSI-biology, midwest center for structu genomics, MCSG,
veillo parvula; HET: MLZ; 1.25A {Veillonella parvula
dsm 2008} PDB: 3r14_A*
Length = 221
Score = 27.3 bits (60), Expect = 7.7
Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 1 VTGCTDGIGQAYAHEL-ARRGINIVLISRTLEKLKKTAKEIGMINISLIISNFPCVTQIT 59
+ G I Q L ++I L R L+ + I +++I +F
Sbjct: 10 ILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIP-PEIIDHERVTVIEGSF--QNPGX 66
Query: 60 IADAVEG 66
+ AV
Sbjct: 67 LEQAVTN 73
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION
transporter, symporter, transport protein; HET: NAI;
2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A*
2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Length = 144
Score = 26.9 bits (60), Expect = 7.9
Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 91 IGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKAALDKIKT 150
G + EL R G ++ + EK+ A T + A+ +E + L +
Sbjct: 17 FGGSIVKELHRMGHEVLAVDINEEKVNAYASYA-------THAVIANATE-ENELLSLGI 68
Query: 151 ELEGHTIGILVNNVGANYTYPMYLDEIPERDLW 183
+ I + N+ A+ + L E+ ++W
Sbjct: 69 RNFEYVIVAIGANIQASTLTTLLLKELDIPNIW 101
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A
{Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Length = 503
Score = 27.7 bits (62), Expect = 8.8
Identities = 27/169 (15%), Positives = 52/169 (30%), Gaps = 5/169 (2%)
Query: 55 VTQITIADAVEGLYSTKNQGLCKKFTGPMVTGCTDGIGQAYAHELARRGINIVLISRTLE 114
+ + ++ +T N + + G + A L S
Sbjct: 84 LDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQL 143
Query: 115 KLKKTAKEIETTHGVQTKIIAADMSEGKAALDKIKTELEGHTIGILVNNVGANYTYPMYL 174
K K+ V +++ G+ A+ G + N+ N YL
Sbjct: 144 KTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYL 203
Query: 175 DEIPERDLWNLINLNIATTTMLTKLVLPQMKERGRGAIVNVSSSSEGQP 223
R L + + N+ T + + QMKE G + + V S+ +
Sbjct: 204 ASQA-RQLADSYSKNVITRVIGEQ----QMKELGMHSYLAVGQGSQNES 247
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis;
HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP:
a.151.1.1 c.2.1.7 d.58.39.1
Length = 404
Score = 27.6 bits (62), Expect = 8.9
Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 16 LARRGI-NIVLISRTLEKLKKTAKEIGMINISL 47
L RG+ +++ +RT E+ + A+++G +
Sbjct: 186 LVDRGVRAVLVANRTYERAVELARDLGGEAVRF 218
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure
INIT midwest center for structural genomics, MCSG,
unknown funct; 1.90A {Streptococcus pneumoniae} SCOP:
d.58.18.7
Length = 91
Score = 25.8 bits (57), Expect = 9.4
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 15/75 (20%)
Query: 90 GIGQAYAHELARRGINIVLISRTLEKLKKTAKEIETTHGVQTKIIAADMSEGKAALDKIK 149
GI + ++A G+NI IS+T+ T + E ++
Sbjct: 17 GIVAGVSGKIAELGLNIDDISQTV------------LDEYFTMMAVVSSDEK-QDFTYLR 63
Query: 150 TELE--GHTIGILVN 162
E E G T+ + +N
Sbjct: 64 NEFEAFGQTLNVKIN 78
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.134 0.389
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,311,535
Number of extensions: 380666
Number of successful extensions: 2734
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2063
Number of HSP's successfully gapped: 537
Length of query: 424
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 328
Effective length of database: 4,021,377
Effective search space: 1319011656
Effective search space used: 1319011656
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (26.3 bits)