RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10632
(273 letters)
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 126 bits (318), Expect = 3e-35
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
V+TG + GIG A A A+ G +IVL++R +++L + A+ ++ GV+ +AVD++
Sbjct: 11 VITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE 70
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
G A +E+V++ G ILVNN G + + E W L V+ + +
Sbjct: 71 GVDAVVESVRSSFG--GADILVNNAG---TGSNETIMEAADEKWQFYWELLVMAAVRLAR 125
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATKT 270
++P M+ G GAI++ +SI P +Y TK
Sbjct: 126 GLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKA 162
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 119 bits (300), Expect = 1e-32
Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 11/158 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESL-HGVQTKIIAVDLS-- 174
VVT + G+G A A ELAR G ++L SR EKL+ A I SL G Q I+A D+
Sbjct: 11 VVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREP 70
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMT 232
E + LG ILV + G + E WD L +
Sbjct: 71 GDIDRLFEKAR-DLG--GADILVYSTG---GPRPGRFMELGVEDWDESYRLLARSAVWVG 124
Query: 233 KLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATKT 270
+ +M + G G +V + S++ PW + +
Sbjct: 125 RRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRL 162
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 116 bits (293), Expect = 1e-31
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+VTG GIG A A A G ++VL+ RT L + + +I+S Q IIA++L
Sbjct: 18 LVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENAT 77
Query: 177 ----KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTT 229
+ V+++ G + L++N + P++ E E + + +NV F
Sbjct: 78 AQQYRELAARVEHEFG--RLDGLLHNASIIG--PRTPLEQLPDEDFMQVMHVNVNATF-- 131
Query: 230 LMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
++T+ +LP +K + +I SS A + Y +K
Sbjct: 132 MLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSK 171
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 115 bits (291), Expect = 2e-31
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 11/153 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
V+TG + G+G A G L R+ KL + + G A DL+ +
Sbjct: 5 VITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGY----RARDLA-SH 59
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTKLIL 236
+E + QL +V++ GS L ++ + E T + N+ + + ++
Sbjct: 60 QEVEQLFEQLDSI-PSTVVHSAGSG---YFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115
Query: 237 PRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
R KD +V + S + P A + Y A K
Sbjct: 116 KRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVK 147
Score = 29.5 bits (67), Expect = 1.00
Identities = 4/23 (17%), Positives = 13/23 (56%)
Query: 48 ALRVEYQKYGITVQHIAPAFVST 70
++R+E + + + + P ++T
Sbjct: 156 SVRLELKGKPMKIIAVYPGGMAT 178
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 114 bits (288), Expect = 7e-31
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+VTG +DGIGR A AR G ++L+ R EKL++ A I G Q + +DL
Sbjct: 16 LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCT 75
Query: 177 ----KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTT 229
+ + + + +++N G L + + W + +NV F
Sbjct: 76 SENCQQLAQRIAVNYP--RLDGVLHNAGLL--GDVCPMSEQNPQVWQDVMQVNVNATF-- 129
Query: 230 LMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
++T+ +LP + + G++V SS A + YAA+K
Sbjct: 130 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASK 169
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 114 bits (288), Expect = 9e-31
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VT TDGIG A A LA+ G ++V+ SR E + +T ++ G+ +
Sbjct: 18 LVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVCHVGKAE 76
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
+ + N G V ILV+N + D +E WD L +NV T LMTK
Sbjct: 77 DRERLVAMAVNLHG--GVDILVSNAAVNPFF--GNIIDATEEVWDKILHVNVKATVLMTK 132
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATKT 270
++P M+ G G+++ VSS+ P+ Y +KT
Sbjct: 133 AVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKT 169
Score = 30.5 bits (70), Expect = 0.51
Identities = 8/25 (32%), Positives = 10/25 (40%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
L VE I V +AP + T
Sbjct: 177 NLAVELAPRNIRVNCLAPGLIKTNF 201
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 114 bits (289), Expect = 9e-31
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG + GIG A ELA G + SR ++L + + G+ + DL
Sbjct: 25 LVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDLLSRT 83
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
++ V + ++ILVNN G +D ++ ++ + N +++
Sbjct: 84 ERDKLMQTVAHVFDG-KLNILVNNAG---VVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQ 139
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ P +K + G ++ +SSI+ S ++Y+A+K
Sbjct: 140 IAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK 175
Score = 30.2 bits (69), Expect = 0.66
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
+L E+ K I V +AP + T +
Sbjct: 184 SLACEWAKDNIRVNSVAPGVILTPLV 209
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 114 bits (287), Expect = 9e-31
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 117 FVVTGCTDGIGRAYAHELAR---RGINIVLISRTLEKLKKTAKEIESLH-GVQTKIIAVD 172
V+TG + G GRA A +LAR G +++ +R+ L++ +E+ + ++ + A D
Sbjct: 9 CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68
Query: 173 LS---GTKAAIEAVKNQLGDH--PVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVV 226
L G + + AV+ +L+NN +L K + + +LN+
Sbjct: 69 LGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLT 128
Query: 227 FTTLMTKLILPRMKDNG--RGAIVNVSSISEASPWALFNVYAATK 269
+T L +D+ +VN+SS+ P+ + +Y A K
Sbjct: 129 SMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGK 173
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 114 bits (287), Expect = 1e-30
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG + GIG ELA G ++ SR ++L + S G + + DLS
Sbjct: 13 LVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDLSSRS 71
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
+ + V N ++ILVNN G + +D E + +S+N ++
Sbjct: 72 ERQELMNTVANHFHG-KLNILVNNAGIV---IYKEAKDYTVEDYSLIMSINFEAAYHLSV 127
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
L P +K + RG +V +SS+S A VY ATK
Sbjct: 128 LAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK 163
Score = 30.1 bits (69), Expect = 0.60
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
L E+ K I V + P ++T +
Sbjct: 172 CLAFEWAKDNIRVNGVGPGVIATSLV 197
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 113 bits (286), Expect = 2e-30
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG + GIGR A+ LA+ G ++V+ +R+ E L+K L IA +
Sbjct: 32 IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 91
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
+ + +G + +L+ N + +S + ++ +N + ++T
Sbjct: 92 FAEQFVAQAGKLMG--GLDMLILNHITNTS---LNLFHDDIHHVRKSMEVNFLSYVVLTV 146
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
LP +K G+IV VSS++ + + Y+A+K
Sbjct: 147 AALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASK 181
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 112 bits (283), Expect = 5e-30
Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
V++G +G A A +G ++VL +RT+E+L+ AK++ G + + D++
Sbjct: 15 VISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-GRRALSVGTDITDDA 73
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
++ G V +++NN + +T E + L V + +
Sbjct: 74 QVAHLVDETMKAYG--RVDVVINNAFRV--PSMKPFANTTFEHMRDAIELTVFGALRLIQ 129
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
P +++ +GA+VNV+S+ A + Y K
Sbjct: 130 GFTPALEE-SKGAVVNVNSMVVRHSQAKYGAYKMAK 164
Score = 29.8 bits (68), Expect = 0.81
Identities = 8/52 (15%), Positives = 18/52 (34%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVST 99
L E + GI V + P ++ + + + + Y +A +
Sbjct: 173 TLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS 224
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 112 bits (282), Expect = 6e-30
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHG-VQTKIIAVDLSGT 176
+VTG T GIG+A A L G N+++ R E + +T KEI + + + + DL T
Sbjct: 14 LVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG-T 72
Query: 177 KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTKLI 235
+ + V + V IL+NN+G + D E W +N++ +T+
Sbjct: 73 EQGCQDVIEKYPK--VDILINNLG---IFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSY 127
Query: 236 LPRMKDNGRGAIVNVSSISEASPWALFNVYAATKT 270
L +M + G ++ ++S + P Y+ATKT
Sbjct: 128 LKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKT 162
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 111 bits (280), Expect = 9e-30
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+VTG + G G A A RG + + + E L++TA+ + + + D++
Sbjct: 6 IVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEG 65
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
AAI A Q G + +LVNN G + + T E +D +++NV +F L
Sbjct: 66 DVNAAIAATMEQFG--AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIF--LG 121
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ +LP M G G IVN++S++ + + Y +K
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSK 159
Score = 27.8 bits (63), Expect = 3.3
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 51 VEYQKYGITVQHIAPAFVSTKM 72
V+Y GI + P + T M
Sbjct: 171 VDYAGSGIRCNAVCPGMIETPM 192
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 111 bits (280), Expect = 1e-29
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 10/157 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG T GIG A A G +VL R + +L + + G +A+DL+
Sbjct: 24 LITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPD 83
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
G + +LVNN G DT+ + +D T+++N+ L+
Sbjct: 84 APAELARRAAEAFG--GLDVLVNNAG---ISHPQPVVDTDPQLFDATIAVNLRAPALLAS 138
Query: 234 LILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
+ M G GAI+ V+S + +P Y +K
Sbjct: 139 AVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSK 175
Score = 30.2 bits (69), Expect = 0.67
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
L E +GI + P V T+M
Sbjct: 184 VLARELGPHGIRANSVCPTVVLTEMG 209
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 111 bits (279), Expect = 1e-29
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 14/159 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAV-----D 172
++TG + GIG A LA G +VLI+R+ + L+K EI + + I + D
Sbjct: 11 IITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD 70
Query: 173 LSGTKAAIEAVKNQLGDHPVHILVNNVG-SLSSYPKSLTEDTEKETWDT-LSLNVVFTTL 230
+ I+ + + G V ILVN + ++ + + +NV+
Sbjct: 71 CTKADTEIKDIHQKYG--AVDILVNAAAMFMDGSLSEPVDN-----FRKIMEINVIAQYG 123
Query: 231 MTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ K + MK G I NV+S + +A +Y +TK
Sbjct: 124 ILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTK 162
Score = 30.6 bits (70), Expect = 0.43
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
+L E GI V + P +V+T M
Sbjct: 171 SLYRELAPLGIRVTTLCPGWVNTDM 195
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 111 bits (280), Expect = 2e-29
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLH--GVQTKIIAVDLSG 175
+VTG GIG+ A L G +++++ R +KL +E+E+L G + D++
Sbjct: 15 LVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74
Query: 176 T---KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLM 231
A++AV G +H +V+ G S + E W T+ LNV T +
Sbjct: 75 EDETARAVDAVTAWHG--RLHGVVHCAG--GSENIGPITQVDSEAWRRTVDLNVNGTMYV 130
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
K M G G+ V +SSI+ ++ F Y TK
Sbjct: 131 LKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTK 168
Score = 29.4 bits (67), Expect = 0.99
Identities = 5/23 (21%), Positives = 8/23 (34%)
Query: 51 VEYQKYGITVQHIAPAFVSTKMN 73
E + V I P + T +
Sbjct: 180 DELGASWVRVNSIRPGLIRTDLV 202
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 110 bits (277), Expect = 4e-29
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG T GIG A E A G I +R +L + + + G Q D S
Sbjct: 18 LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSVCDASLRP 76
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
+ ++ V + G + IL+NN+G + T D E + +S N+ +++
Sbjct: 77 EREKLMQTVSSMFG-GKLDILINNLG---AIRSKPTLDYTAEDFSFHISTNLESAYHLSQ 132
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
L P +K +G G I+ +SSI+ ++ ++Y+ATK
Sbjct: 133 LAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATK 168
Score = 29.0 bits (66), Expect = 1.3
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
L E+ GI +APA ++T +
Sbjct: 177 NLACEWASDGIRANAVAPAVIATPLA 202
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 109 bits (274), Expect = 9e-29
Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 10/157 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLH-GVQTKIIAVDLS-- 174
VVTG + GIG A L G + +R E+L+ + G + D+
Sbjct: 12 VVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDA 71
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMT 232
+A EA + LG ILVNN G S +T E W L L
Sbjct: 72 LQVRAFAEACERTLG--CASILVNNAG---QGRVSTFAETTDEAWSEELQLKFFSVIHPV 126
Query: 233 KLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ LP+++ AIV V+S+ + P +A +
Sbjct: 127 RAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAAR 163
Score = 28.3 bits (64), Expect = 2.4
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
++ E+ G+ V I V +
Sbjct: 172 SMAFEFAPKGVRVNGILIGLVESGQ 196
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 108 bits (272), Expect = 9e-29
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
V+TG + GIG A A LAR G + L +R++++L+K A E+ GV+ +D+S
Sbjct: 6 VITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAE 65
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
+ + V + G V ++V N G E+ +E + + +N++ K
Sbjct: 66 SVEEFSKKVLERFG--DVDVVVANAGLG---YFKRLEELSEEEFHEMIEVNLLGVWRTLK 120
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
L +K G A+V S +S A Y +TK
Sbjct: 121 AFLDSLKRTGGLALVTTSDVS-ARLIPYGGGYVSTK 155
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 109 bits (274), Expect = 1e-28
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG + GIG A EL G I+L +R +++ A EI G +D++
Sbjct: 8 LITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD-AGGTALAQVLDVTDRH 66
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
A +A + G + +LVNN G + P S + + W+ + +N+
Sbjct: 67 SVAAFAQAAVDTWG--RIDVLVNNAGVM---PLSPLAAVKVDEWERMIDVNIKGVLWGIG 121
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+LP M+ G I+N+ SI S VY ATK
Sbjct: 122 AVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATK 157
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 108 bits (272), Expect = 1e-28
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG GIG+ A A G ++V+ + EI+ L G Q D++
Sbjct: 15 IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDITSEQ 73
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
A + ++LG V ILVNN G P + + LNV F +
Sbjct: 74 ELSALADFAISKLG--KVDILVNNAGGGGPKPFDMPM----ADFRRAYELNVFSFF--HL 125
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
++L+ P M+ NG G I+ ++S++ + YA++K
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK 163
Score = 30.2 bits (69), Expect = 0.54
Identities = 7/28 (25%), Positives = 11/28 (39%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A + + I V IAP + T
Sbjct: 172 NMA---FDLGEKNIRVNGIAPGAILTDA 196
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 108 bits (273), Expect = 1e-28
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
++TG GIGR A+E A+ +VL L++TA + + L G + VD S +
Sbjct: 35 LITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDCSNRE 93
Query: 178 A---AIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDTLSLNVVFTTLMTKL 234
+ + VK ++G V ILVNN G + Y L + + T +NV+ TK
Sbjct: 94 DIYSSAKKVKAEIG--DVSILVNNAGVV--YTSDLFATQDPQIEKTFEVNVLAHFWTTKA 149
Query: 235 ILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
LP M N G IV V+S + Y ++K
Sbjct: 150 FLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK 184
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 107 bits (271), Expect = 2e-28
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+VTG GIGR L G +V ++RT L AKE + V VDL
Sbjct: 11 LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPV-----CVDLG-DW 64
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLMTKL 234
A E +G PV +LVNN + P + KE +D + S+N+ VF ++++
Sbjct: 65 DATEKALGGIG--PVDLLVNNAALVIMQP---FLEVTKEAFDRSFSVNLRSVF--QVSQM 117
Query: 235 ILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
+ M + G G+IVNVSS+ + Y++TK
Sbjct: 118 VARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK 153
Score = 29.8 bits (68), Expect = 0.85
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
A+ +E + I V + P V T M
Sbjct: 162 AMAMELGPHKIRVNSVNPTVVLTDMG 187
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 107 bits (270), Expect = 2e-28
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 17/156 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+VTG GIGR L G +V +SRT L +E + V VDL
Sbjct: 11 LVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPV-----CVDLG-DW 64
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLMTKL 234
A E +G PV +LVNN P + KE +D + +N+ V ++++
Sbjct: 65 EATERALGSVG--PVDLLVNNAAVALLQP---FLEVTKEAFDRSFEVNLRAVI--QVSQI 117
Query: 235 ILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
+ + G GAIVNVSS +VY +TK
Sbjct: 118 VARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK 153
Score = 29.4 bits (67), Expect = 0.96
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
+ +E + I V + P V T M
Sbjct: 162 VMALELGPHKIRVNAVNPTVVMTSMG 187
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 107 bits (269), Expect = 3e-28
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
++TG + GIG A A L +G + L++R ++L+ A E+E + + +
Sbjct: 9 LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDV--REEGDWA 66
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTKLIL 236
A+ A++ G + LVNN G + E W L N+ L + +
Sbjct: 67 RAVAAMEEAFG--ELSALVNNAGVG---VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAV 121
Query: 237 PRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
P + G G IVNV S++ +P+ Y A+K
Sbjct: 122 PALLRRGGGTIVNVGSLAGKNPFKGGAAYNASK 154
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 108 bits (271), Expect = 3e-28
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAV-----D 172
++TG ++GIGRA A AR G + + R E+L++T ++I + + + +V
Sbjct: 10 IITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT 69
Query: 173 LSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPK-SLTEDTEKETWD-TLSLNV--VFT 228
+G + + G + ILVNN G+ + E++D TL+LN+ V
Sbjct: 70 DAGQDEILSTTLGKFGK--LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI- 126
Query: 229 TLMTKLILPRMKDNGRGAIVNVSSISEA-SPWALFNVYAATK 269
+TK +P + +G IVN+SSI+ F Y+ K
Sbjct: 127 -ALTKKAVPHLSS-TKGEIVNISSIASGLHATPDFPYYSIAK 166
Score = 27.5 bits (62), Expect = 4.3
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A ++ ++GI V I+P V+T
Sbjct: 175 NTA---IDLIQHGIRVNSISPGLVATGF 199
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 106 bits (267), Expect = 6e-28
Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 11/156 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
V G D IG A + A G + R EKL EIE+ G + ++D
Sbjct: 11 AVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNED 69
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
A + A P+ + + NVG+ +T + + + +
Sbjct: 70 EVTAFLNAAD-AHA--PLEVTIFNVGAN---VNFPILETTDRVFRKVWEMACWAGFVSGR 123
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
M +G+G I + + + F +A+ K
Sbjct: 124 ESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAK 159
Score = 29.9 bits (68), Expect = 0.70
Identities = 7/26 (26%), Positives = 10/26 (38%), Gaps = 1/26 (3%)
Query: 48 ALRVEYQKYGITVQH-IAPAFVSTKM 72
++ E I V H I + V T
Sbjct: 168 SMARELMPKNIHVAHLIIDSGVDTAW 193
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center
for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 106 bits (268), Expect = 7e-28
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 11/157 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG + G+G+ A A+ G +V+ RT EKL++ EIE Q + +D+
Sbjct: 10 IITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PGQILTVQMDVRNTD 68
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
+ IE + + G + IL+NN ED W++ +++ + T ++
Sbjct: 69 DIQKMIEQIDEKFG--RIDILINNAA---GNFICPAEDLSVNGWNSVINIVLNGTFYCSQ 123
Query: 234 LILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
I + G G I+N+ + AA K
Sbjct: 124 AIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK 160
Score = 28.6 bits (65), Expect = 1.9
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 45 SWAALRVEY-QKYGITVQHIAPAFVSTKMN 73
+ A VE+ +KYGI V IAP +
Sbjct: 169 TLA---VEWGRKYGIRVNAIAPGPIERTGG 195
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 106 bits (266), Expect = 1e-27
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG T G G ++G ++ R E+L++ E+ G I +D+
Sbjct: 4 LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRA 59
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
+ + ++ + + + ILVNN G + E W+T + N MT+
Sbjct: 60 AIEEMLASLPAEWCN--IDILVNNAGL--ALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+LP M + G I+N+ S + + P+A NVY ATK
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATK 151
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 106 bits (267), Expect = 1e-27
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
++TG GIGRA A LA G+ + + RT ++++ A EI G Q + D+S
Sbjct: 32 LITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-GGQAIALEADVSDEL 90
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+ A+ + + G + I+V N G + +D + WD T+++N+ F L
Sbjct: 91 QMRNAVRDLVLKFG--HLDIVVANAGING--VWAPIDDLKPFEWDETIAVNLRGTF--LT 144
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFN--VYAATK 269
L +P +K G GAIV VSSI+ + Y ATK
Sbjct: 145 LHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATK 184
Score = 29.1 bits (66), Expect = 1.5
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 51 VEYQKYGITVQHIAPAFVSTKM 72
+E K+ I V + P + T +
Sbjct: 196 LELGKHHIRVNAVCPGAIETNI 217
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 105 bits (265), Expect = 2e-27
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 13/158 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+VTG IG A A LA G I L+ E L+K + GV+ + D++
Sbjct: 11 LVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEARSYVCDVTSEE 69
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+++V G + L NN G + +D + + L++NV F +
Sbjct: 70 AVIGTVDSVVRDFG--KIDFLFNNAG--YQGAFAPVQDYPSDDFARVLTINVTGAF--HV 123
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
K + +M G IVN +S++ Y +K
Sbjct: 124 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK 161
Score = 31.0 bits (71), Expect = 0.37
Identities = 6/28 (21%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A ++ Y I V I+P ++
Sbjct: 170 TAA---LDLAPYNIRVNAISPGYMGPGF 194
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 106 bits (266), Expect = 2e-27
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAV-----D 172
+VTG + GIG A A L ++G+ +V +RT+ +++ A E +S G +I +
Sbjct: 36 LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKS-AGYPGTLIPYRCDLSN 94
Query: 173 LSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLM 231
+ A+++Q V I +NN G W ++NV+ ++
Sbjct: 95 EEDILSMFSAIRSQHS--GVDICINNAGLA---RPDTLLSGSTSGWKDMFNVNVLALSIC 149
Query: 232 TKLILPRMKDNG--RGAIVNVSSIS--EASPWALFNVYAATK 269
T+ MK+ G I+N++S+S P ++ + Y+ATK
Sbjct: 150 TREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATK 191
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 105 bits (265), Expect = 2e-27
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+TG T G G A A A G ++VL R E+L+ A E+ + + + +D+
Sbjct: 25 FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA--KTRVLPLTLDVRDRA 82
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
AA++ + + + L+NN G + + + + WDT + N+ T+
Sbjct: 83 AMSAAVDNLPEEFAT--LRGLINNAG--LALGTDPAQSCDLDDWDTMVDTNIKGLLYSTR 138
Query: 234 LILPRMKDNGRGA-IVNVSSISEASPWALFNVYAATK 269
L+LPR+ +G GA IVN+ S++ P+ +VY TK
Sbjct: 139 LLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTK 175
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 105 bits (264), Expect = 2e-27
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG + G+G A LA G ++V+ SR LE+ + A+++ +GV+T D+S
Sbjct: 25 LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE 84
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT---LSLNVVFTTLM 231
K +EAVK + G + +VN G +P E+ + + ++L + +
Sbjct: 85 EVKKLLEAVKEKFG--KLDTVVNAAGINRRHP---AEEFPLDEFRQVIEVNLFGTY--YV 137
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNV--YAATK 269
+ ++++ +I+N+ S++ + N+ YAA+K
Sbjct: 138 CREAFSLLRESDNPSIINIGSLT-VEEVTMPNISAYAASK 176
Score = 31.3 bits (72), Expect = 0.25
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
AL E+ +YGI V IAP + TKM
Sbjct: 185 ALAKEWGRYGIRVNVIAPGWYRTKMT 210
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 104 bits (262), Expect = 3e-27
Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 14/156 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG G+GRA L RG + ++ R ++L++ + G I DL+
Sbjct: 7 IVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL----GNAVIGIVADLAHHE 62
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
A A G ++++ G+ E + N+V T L+ +
Sbjct: 63 DVDVAFAAAVEWGG--LPELVLHCAGTG---EFGPVGVYTAEQIRRVMESNLVSTILVAQ 117
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ + + G G + NV S + A ++Y A+K
Sbjct: 118 QTVRLIGERG-GVLANVLSSAAQVGKANESLYCASK 152
Score = 30.2 bits (69), Expect = 0.59
Identities = 9/53 (16%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVSTL 100
+LR E + + + ++ P+ + ++ + + V F E A + L
Sbjct: 161 SLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGFM--TPEDAAAYMLDAL 211
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 105 bits (265), Expect = 3e-27
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAV--DLS- 174
++TG ++GIGR A A+ G N+ + R+ E+L++T + I + ++ +V D++
Sbjct: 10 IITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT 69
Query: 175 --GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYP-KSLTEDTEKETWD-TLSLNV--VFT 228
G I + Q G + +LVNN G+ + D + + TL LN+ V
Sbjct: 70 EDGQDQIINSTLKQFGK--IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI- 126
Query: 229 TLMTKLILPRMKDNGRGAIVNVSSI-SEASPWALFNVYAATK 269
MTK + P + +G IVNVSSI + F YA K
Sbjct: 127 -EMTKKVKPHLV-ASKGEIVNVSSIVAGPQAQPDFLYYAIAK 166
Score = 28.7 bits (65), Expect = 1.7
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKMNN 74
S A ++ K+GI V ++P V T N
Sbjct: 175 STA---IDLAKFGIRVNSVSPGMVETGFTN 201
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 104 bits (263), Expect = 3e-27
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG + G+G+A A LA G NIV+ +R+ + +TA+EIE L GV+ ++ ++
Sbjct: 8 LVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-GVKVLVVKANVGQP 66
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMT 232
K + + G + + VNN S + E+ WD T+++N
Sbjct: 67 AKIKEMFQQIDETFG--RLDVFVNNAAS---GVLRPVMELEETHWDWTMNINAKALLFCA 121
Query: 233 KLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ M+ NG G IV++SS+ + +K
Sbjct: 122 QEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSK 158
Score = 29.4 bits (67), Expect = 1.0
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
L VE I V ++ + T
Sbjct: 167 YLAVELSPKQIIVNAVSGGAIDTDAL 192
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 105 bits (265), Expect = 3e-27
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAV-----D 172
++TG ++GIGR+ A A+ G + + R ++L++T ++I KI AV +
Sbjct: 30 IITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89
Query: 173 LSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTT 229
SG I + G + ILVNN G+ + + T+ E + T LN V
Sbjct: 90 ASGQDDIINTTLAKFG--KIDILVNNAGANLADGTANTDQPV-ELYQKTFKLNFQAVI-- 144
Query: 230 LMTKLILPRMKDNGRGAIVNVSSI-SEASPWALFNVYAATK 269
MT+ + +G IVNVSSI + + + YA K
Sbjct: 145 EMTQKTKEHLI-KTKGEIVNVSSIVAGPQAHSGYPYYACAK 184
Score = 28.0 bits (63), Expect = 2.9
Identities = 6/28 (21%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
A ++ ++G+ V ++P V+T
Sbjct: 193 CTA---IDLIQHGVRVNSVSPGAVATGF 217
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 105 bits (263), Expect = 4e-27
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG G+GR A L+ G ++V+ R + L A EI G + + D+
Sbjct: 37 LVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPD 96
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
A AV+ + + +LVNN G S+ P E+ E W+ ++ N+ F L
Sbjct: 97 QVAALFAAVRAEFA--RLDLLVNNAG--SNVPPVPLEEVTFEQWNGIVAANLTGAF--LC 150
Query: 232 TKLILPRMKDNGR--GAIVNVSSISEASPWALFNVYAATK 269
T+ MK G I+N SIS +P Y ATK
Sbjct: 151 TQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATK 190
Score = 30.7 bits (70), Expect = 0.47
Identities = 4/25 (16%), Positives = 10/25 (40%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
+ ++ + + I I +T M
Sbjct: 199 STALDGRMHDIACGQIDIGNAATDM 223
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 104 bits (262), Expect = 4e-27
Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 21/160 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSG-- 175
+ GIG + EL +R + +I +E A+ V D++
Sbjct: 9 IFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPV 68
Query: 176 --TKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMT 232
+K ++ + +QL V IL+N G + +D + T+++N T
Sbjct: 69 AESKKLLKKIFDQLKT--VDILINGAG--------ILDD---HQIERTIAINFTGLVNTT 115
Query: 233 KLILPRM---KDNGRGAIVNVSSISEASPWALFNVYAATK 269
IL K G I N+ S++ + VY+A+K
Sbjct: 116 TAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASK 155
Score = 32.2 bits (74), Expect = 0.12
Identities = 6/25 (24%), Positives = 9/25 (36%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
+L G+T I P T +
Sbjct: 164 SLAKLAPITGVTAYSINPGITRTPL 188
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 104 bits (262), Expect = 5e-27
Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 15/160 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG IG A LA G +++ K +++ G + +D++
Sbjct: 17 IVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-GHDVSSVVMDVTNTE 75
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+ A+ +V Q G V ILV G + ED W + +N+ +F
Sbjct: 76 SVQNAVRSVHEQEG--RVDILVACAG--ICISEVKAEDMTDGQWLKQVDINLNGMF--RS 129
Query: 232 TKLILPRMKDNGRGAIVNVSSIS--EASPWALFNVYAATK 269
+ + M + +G IV + S+S + Y A+K
Sbjct: 130 CQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASK 169
Score = 31.7 bits (73), Expect = 0.19
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKMNNF 75
S A E+ +GI +AP ++ T + F
Sbjct: 178 SLA---AEWAPHGIRANAVAPTYIETTLTRF 205
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 105 bits (264), Expect = 5e-27
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+TG G+G+ L+ G V+ SR ++ LK TA++I S G + I D+
Sbjct: 30 FITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPD 89
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
+ + + G +I++NN S TE W T + + T +T
Sbjct: 90 MVQNTVSELIKVAG--HPNIVINNAA---GNFISPTERLSPNAWKTITDIVLNGTAFVTL 144
Query: 234 LILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
I ++ + A +++++I + A+ K
Sbjct: 145 EIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK 181
Score = 29.1 bits (66), Expect = 1.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
+L E+ KYG+ I P + TK
Sbjct: 190 SLAAEWGKYGMRFNVIQPGPIKTKGA 215
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 103 bits (260), Expect = 8e-27
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 18/160 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG GIG+AYA LAR G +V+ E + AK+I + G +AVD+S
Sbjct: 13 IVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAISVAVDVSDPE 71
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFTTLM 231
KA + + G + LVNN + E + +S+N+
Sbjct: 72 SAKAMADRTLAEFG--GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL--WC 127
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALF--NVYAATK 269
T+ + +M G GAIVN SS + A N Y K
Sbjct: 128 TRAVYKKMTKRGGGAIVNQSSTA-----AWLYSNYYGLAK 162
Score = 29.8 bits (68), Expect = 0.74
Identities = 6/28 (21%), Positives = 10/28 (35%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ E I + IAP + T+
Sbjct: 171 QLS---RELGGRNIRINAIAPGPIDTEA 195
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 104 bits (261), Expect = 8e-27
Identities = 30/156 (19%), Positives = 64/156 (41%), Gaps = 9/156 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+TG GIG A R G + V+ SR+L ++ A+++ G + +++D+
Sbjct: 31 FITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPP 90
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
AA++ + G + IL+N + T + ++ T +++
Sbjct: 91 AVMAAVDQALKEFG--RIDILINCAA---GNFLCPAGALSFNAFKTVMDIDTSGTFNVSR 145
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
++ + + G IVN+++ AL + K
Sbjct: 146 VLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAK 181
Score = 28.0 bits (63), Expect = 2.9
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
L VE+ I V +AP +S
Sbjct: 190 HLAVEWGPQNIRVNSLAPGPISGTE 214
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 103 bits (259), Expect = 1e-26
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 13/157 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
VTG GIG A G ++LI R L + A+E+ I D++ +
Sbjct: 15 AVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG---AAVAARIVADVTDAE 71
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFTTLMTKL 234
A A PV ILVN+ G + +T+ TW +++NV +F ++
Sbjct: 72 AMTAAAAEAEAVAPVSILVNSAGIARLHD---ALETDDATWRQVMAVNVDGMF--WASRA 126
Query: 235 ILPRMKDNGRGAIVNVSSIS--EASPWALFNVYAATK 269
M G GAIVN+ S+S + + Y A+K
Sbjct: 127 FGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASK 163
Score = 31.3 bits (72), Expect = 0.26
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
AL E+ G+ V +AP +V+T+M
Sbjct: 172 ALAAEWAGRGVRVNALAPGYVATEMT 197
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 103 bits (260), Expect = 1e-26
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
VVTG GIGRA AH AR G +++ RT + +K+ A EI G + + DL+ +
Sbjct: 35 VVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG-GGSAEAVVADLADLE 92
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT---LSLNVVFTTLMTKL 234
A + V +LVNN G ++ P E+ W ++L+ + ++++
Sbjct: 93 GAANVAEELAATRRVDVLVNNAGIIARAP---AEEVSLGRWREVLTVNLDAAW--VLSRS 147
Query: 235 ILPRMKDNGRGAIVNVSSISEASPWALFNV--YAATK 269
M +G G IV ++S+ S NV YAA+K
Sbjct: 148 FGTAMLAHGSGRIVTIASM--LSFQGGRNVAAYAASK 182
Score = 31.8 bits (73), Expect = 0.18
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
AL E+ G+ V +AP +V T
Sbjct: 191 ALASEWAGRGVGVNALAPGYVVTANT 216
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 103 bits (259), Expect = 1e-26
Identities = 51/160 (31%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG G+GRA A LA G + L R L+ L++TA EI G + D++
Sbjct: 32 IVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----GDDALCVPTDVTDPD 87
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+A A + G V +L NN G + P ED W + N+ F L
Sbjct: 88 SVRALFTATVEKFG--RVDVLFNNAG--TGAPAIPMEDLTFAQWKQVVDTNLTGPF--LC 141
Query: 232 TKLILPRMK--DNGRGAIVNVSSISEASPWALFNVYAATK 269
T+ MK + G I+N SIS SP Y ATK
Sbjct: 142 TQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATK 181
Score = 31.8 bits (73), Expect = 0.20
Identities = 4/25 (16%), Positives = 9/25 (36%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
+ ++ + + I I T M
Sbjct: 190 STSLDGRVHDIACGQIDIGNADTPM 214
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 103 bits (260), Expect = 1e-26
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTL-EKLKKTAKEIESLHGVQTKIIAVDLS-- 174
V+TG T GIG A A LA+ G NIVL ++++ E+ L D++
Sbjct: 29 VITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKP 88
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMT 232
+ V ++ G ILVNN G ED E WD +++N+ +
Sbjct: 89 SEIADMMAMVADRFG--GADILVNNAGVQFV---EKIEDFPVEQWDRIIAVNLSSSFHTI 143
Query: 233 KLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ +P MK G G I+N++S + Y A K
Sbjct: 144 RGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAK 180
Score = 29.5 bits (67), Expect = 1.2
Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 47 AALRVEYQKYGITVQHIAPAFVSTKM 72
AL E + G+TV I P +V T +
Sbjct: 190 VAL--EVAESGVTVNSICPGYVLTPL 213
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 102 bits (258), Expect = 2e-26
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 19/161 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG G+G AYA LA G ++L L ++ + G +A D++
Sbjct: 13 LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK-GYDAHGVAFDVTDEL 71
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT---LSLNVVFTTLM 231
+AA + + V IL+NN G P + E E W +L F L+
Sbjct: 72 AIEAAFSKLDAEGI--HVDILINNAGIQYRKP---MVELELENWQKVIDTNLTSAF--LV 124
Query: 232 TKLILPRMKDNGR-GAIVNVSSISEASPWALFNV--YAATK 269
++ RM G I+N+ S+ S A V Y A K
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSL--TSQAARPTVAPYTAAK 163
Score = 31.3 bits (72), Expect = 0.28
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
++ E+ ++ I I P ++ T MN
Sbjct: 172 SMAAEWAQFNIQTNAIGPGYILTDMN 197
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 103 bits (260), Expect = 2e-26
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRG---INIVLISRTLEKLKKTAKEIES-LHGVQTKIIAVDL 173
++TG + GIG+A A E + ++L +R LEKL++ K I+ + + +D+
Sbjct: 37 LITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDI 96
Query: 174 S---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTT 229
+ K IE + + D + ILVNN G + E NV
Sbjct: 97 TQAEKIKPFIENLPQEFKD--IDILVNNAGK--ALGSDRVGQIATEDIQDVFDTNVTALI 152
Query: 230 LMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+T+ +LP + G IVN+ SI+ + ++Y A+K
Sbjct: 153 NITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASK 192
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 104 bits (261), Expect = 2e-26
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKK-------TAKEIESLHGVQTKIIA 170
+TG + GIG+A A + A+ G NIV+ ++T + K A+EIE++ G +
Sbjct: 49 FITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-GGKALPCI 107
Query: 171 VDLS---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVV 226
VD+ AA+E + G + ILVNN ++S + T DT + D +++N
Sbjct: 108 VDVRDEQQISAAVEKAIKKFG--GIDILVNNASAISL---TNTLDTPTKRLDLMMNVNTR 162
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSSISEASP--WALFNVYAATK 269
T L +K +P +K + I+N+S +P + Y K
Sbjct: 163 GTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAK 207
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 102 bits (257), Expect = 3e-26
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 13/158 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+VTG GIGRA A + A +V + ++L + +E+ + G + + D+S
Sbjct: 11 IVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-GKEVLGVKADVSKKK 69
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+ + + +L NN G + + + E W+ L++N+ F
Sbjct: 70 DVEEFVRRTFETYS--RIDVLCNNAGIMD--GVTPVAEVSDELWERVLAVNLYSAF--YS 123
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
++ ++P M G+G IVN +SI+ Y K
Sbjct: 124 SRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK 161
Score = 29.0 bits (66), Expect = 1.4
Identities = 8/28 (28%), Positives = 10/28 (35%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
S A Y GI + P V T +
Sbjct: 170 SIA---AHYGDQGIRAVAVLPGTVKTNI 194
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 103 bits (258), Expect = 3e-26
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
VTG + GIG A A A+ G ++ + + +K ++ +GV +K ++S K
Sbjct: 38 SVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT-YGVHSKAYKCNISDPK 96
Query: 178 AAIEAVKNQLGDH-PVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLMTK 233
+ E + Q D + + V N G + + ++W+ +S+++ V+ +
Sbjct: 97 SVEETISQQEKDFGTIDVFVANAGVTWTQG-PEIDVDNYDSWNKIISVDLNGVY--YCSH 153
Query: 234 LILPRMKDNGRGAIVNVSSIS 254
I K NG+G+++ SSIS
Sbjct: 154 NIGKIFKKNGKGSLIITSSIS 174
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 103 bits (258), Expect = 3e-26
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 17/161 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
++TG + GIG+ A A G + + +R + L+ A EI + G + I D++
Sbjct: 36 LITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-GGKALPIRCDVTQPD 94
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFTTLM 231
+ ++ + +LG + I V N G +S D E + NV VF L
Sbjct: 95 QVRGMLDQMTGELG--GIDIAVCNAGIVSVQA---MLDMPLEEFQRIQDTNVTGVF--LT 147
Query: 232 TKLILPRMKDNGR-GAIVNVSSIS--EASPWALFNVYAATK 269
+ M D G G I+ +S+S + + Y +K
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSK 188
Score = 30.6 bits (70), Expect = 0.46
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNF 75
A+ VE + I V ++P ++ T++
Sbjct: 197 AMAVELAPHQIRVNSVSPGYIRTELVEP 224
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 102 bits (256), Expect = 4e-26
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG GIGRA A A+ G ++V+ E + A I G + + +++
Sbjct: 16 IVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-GGKAIGLECNVTDEQ 74
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT----EKETWDT-LSLNV--VF 227
+A I+A +Q G + +LVNN G ++ LN+ +F
Sbjct: 75 HREAVIKAALDQFG--KITVLVNNAG--------GGGPKPFDMPMSDFEWAFKLNLFSLF 124
Query: 228 TTLMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+++L P M+ G GAI+N+SS++ + Y ++K
Sbjct: 125 --RLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSK 164
Score = 30.2 bits (69), Expect = 0.64
Identities = 8/28 (28%), Positives = 11/28 (39%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A + GI V IAP + T
Sbjct: 173 NIA---FDVGPMGIRVNAIAPGAIKTDA 197
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 101 bits (254), Expect = 6e-26
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG + GIG A A LA G + + +R +EKL+ E+ + G + ++ +D++
Sbjct: 11 LITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA-AGAKVHVLELDVADRQ 69
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
G AA+ + LG + ILVNN G + ED + W + N++ MT+
Sbjct: 70 GVDAAVASTVEALG--GLDILVNNAGIM---LLGPVEDADTTDWTRMIDTNLLGLMYMTR 124
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
LP + + +G +V +SSI+ VY ATK
Sbjct: 125 AALPHLLRS-KGTVVQMSSIAGRVNVRNAAVYQATK 159
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 101 bits (254), Expect = 6e-26
Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 19/161 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL---ISRTLEKLKKTAKEIESLHGVQTKIIAVDLS 174
V+ G +G A A +N+VL ++ + K E+E G + + DLS
Sbjct: 15 VIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVALYQSDLS 73
Query: 175 ---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFT 228
+ + + G V I +N VG K +T + +D ++N +
Sbjct: 74 NEEEVAKLFDFAEKEFG--KVDIAINTVG---KVLKKPIVETSEAEFDAMDTINNKVAY- 127
Query: 229 TLMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
K M NG I+ +++ A+ ++ YA K
Sbjct: 128 -FFIKQAAKHMNPNGH--IITIATSLLAAYTGFYSTYAGNK 165
Score = 27.1 bits (61), Expect = 6.5
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 52 EYQKYGITVQHIAPAFVSTKMN 73
E K I+V IAP + T
Sbjct: 178 ELMKQQISVNAIAPGPMDTSFF 199
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 101 bits (255), Expect = 7e-26
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 17/158 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+VTG GIGRA A A+ G +V+ + + A EI G + + VD+S
Sbjct: 31 IVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GSKAFGVRVDVSSAK 86
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
++ +E + G V +LVNN G +ETWD +S+NV +F L
Sbjct: 87 DAESMVEKTTAKWG--RVDVLVNNAGF---GTTGNVVTIPEETWDRIMSVNVKGIF--LC 139
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+K ++P M+ NG G+I+N +S + S A Y A+K
Sbjct: 140 SKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASK 177
Score = 26.7 bits (60), Expect = 7.6
Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A +++ K GI V +AP + +
Sbjct: 186 AMA---MDHAKEGIRVNAVAPGTIDSPY 210
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 101 bits (254), Expect = 8e-26
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG G G A A+ G +V++ R ++ A EI G +A D+S
Sbjct: 13 LITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GDAALAVAADISKEA 68
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
AA+EA ++ G V ILVNN G + E E E +D + +NV V+ LM
Sbjct: 69 DVDAAVEAALSKFG--KVDILVNNAG--IGHKPQNAELVEPEEFDRIVGVNVRGVY--LM 122
Query: 232 TKLILPRMKDNGRGA----IVNVSSISEASPWALFNVYAATK 269
T ++P K+NG I+NV+S P Y ATK
Sbjct: 123 TSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATK 164
Score = 28.3 bits (64), Expect = 2.3
Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 8/52 (15%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVST 99
AL +E I V + P T + +F D+E+ + +
Sbjct: 173 ALAIELAPAKIRVVALNPVAGETPL--------LTTFMGEDSEEIRKKFRDS 216
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 101 bits (253), Expect = 1e-25
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
VVTG + GIG A A +L G +VL +R +EKL+ +EI + G + + A DLS
Sbjct: 33 VVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-GGEAESHACDLSHSD 91
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFTTLM 231
A V G +LVNN G + + WD +++N+ + L+
Sbjct: 92 AIAAFATGVLAAHG--RCDVLVNNAG--VGWFGGPLHTMKPAEWDALIAVNLKAPY--LL 145
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ P M RG I+N+SS++ +P A Y A+K
Sbjct: 146 LRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASK 183
Score = 32.9 bits (76), Expect = 0.084
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
+ E +++ + V +AP V T+
Sbjct: 192 SAAEELRQHQVRVSLVAPGSVRTEF 216
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 101 bits (254), Expect = 1e-25
Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 18/164 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKK-------TAKEIESLHGVQTKIIA 170
++G + GIG A A +A G N+ L++++ E K AKEIE G Q I
Sbjct: 13 FISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-GGQALPIV 71
Query: 171 VDLS---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVV 226
D+ AA+ Q G + I VNN +++ E+ + +D + V
Sbjct: 72 GDIRDGDAVAAAVAKTVEQFG--GIDICVNNASAINL---GSIEEVPLKRFDLMNGIQVR 126
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSS-ISEASPWALFNVYAATK 269
T +++ +P MK I+ +S I W Y K
Sbjct: 127 GTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAK 170
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 101 bits (253), Expect = 1e-25
Identities = 35/160 (21%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRT-LEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
V+TG + G+G++ A A +V+ R+ ++ +EI+ + G + + D++
Sbjct: 11 VITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKGDVTVE 69
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTL 230
+++ + G + +++NN G + + W+ + N+ F L
Sbjct: 70 SDVINLVQSAIKEFG--KLDVMINNAGL---ENPVSSHEMSLSDWNKVIDTNLTGAF--L 122
Query: 231 MTKLILPRMKDNG-RGAIVNVSSISEASPWALFNVYAATK 269
++ + +N +G ++N+SS+ E PW LF YAA+K
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK 162
Score = 30.9 bits (71), Expect = 0.38
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 52 EYQKYGITVQHIAPAFVSTKMN 73
EY GI V +I P ++T +N
Sbjct: 175 EYAPKGIRVNNIGPGAINTPIN 196
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 100 bits (251), Expect = 2e-25
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG GIG + LAR G +VL L A + G VDL+
Sbjct: 15 IITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GRGAVHHVVDLTNEV 70
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+A I+ + G + I+ NN S L + WD T ++N LM
Sbjct: 71 SVRALIDFTIDTFG--RLDIVDNNAA-HSDPADMLVTQMTVDVWDDTFTVNARGTM--LM 125
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
K +PR+ G GAIVN+SS + + + + YA TK
Sbjct: 126 CKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTK 163
Score = 27.1 bits (61), Expect = 6.4
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 51 VEYQKYGITVQHIAPAFVSTKM 72
+Y ++G+ IAP V T
Sbjct: 175 TQYGRHGVRCNAIAPGLVRTPR 196
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 99.9 bits (250), Expect = 2e-25
Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 9/154 (5%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKL-KKTAKEIESLHGVQTKIIAVDLSGT 176
+VT G A L + G +V + ++ E E+ + A+
Sbjct: 5 LVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-----ALAEQKP 59
Query: 177 KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTKLI 235
+ ++A + +V+N + E T + +F L+ +
Sbjct: 60 ERLVDATLQHGE--AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSA 117
Query: 236 LPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ ++ G +++ ++S P A +Y +
Sbjct: 118 IAPLRAAGGASVIFITSSVGKKPLAYNPLYGPAR 151
Score = 28.2 bits (64), Expect = 2.6
Identities = 5/26 (19%), Positives = 9/26 (34%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
+ + GI + I P F +
Sbjct: 160 SAAKTLSRDGILLYAIGPNFFNNPTY 185
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 99.6 bits (249), Expect = 2e-25
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGIN-------IVLISRTLEKLKKTAKEIESLHGVQTKIIA 170
++TG GIGRA A E AR + +VL SRT L+K + E + G T I
Sbjct: 6 LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTIT 64
Query: 171 VDLS---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVV 226
D+S + + + G + LVNN G D +E +D T++ N+
Sbjct: 65 ADISDMADVRRLTTHIVERYG--HIDCLVNNAGVG---RFGALSDLTEEDFDYTMNTNLK 119
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
T +T+ + M+ G I ++S++ + ++Y +K
Sbjct: 120 GTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK 162
Score = 32.6 bits (75), Expect = 0.088
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 42 KYGSWA---ALRVEYQKYGITVQHIAPAFVSTKM 72
K+G +R+ +K + + + P V T M
Sbjct: 162 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 195
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 100 bits (251), Expect = 3e-25
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+VTG + GIGRA A AR G +V+ +R L + EI G + +A D+
Sbjct: 12 IVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG-GGGEAAALAGDVGDEA 70
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+A +E + G + NN G+L E W TL N+ F L
Sbjct: 71 LHEALVELAVRRFG--GLDTAFNNAGALG--AMGEISSLSVEGWRETLDTNLTSAF--LA 124
Query: 232 TKLILPRMKDNGRGAIVNVSSIS-EASPWALFNVYAATK 269
K +P + G G++ SS + +A YAA+K
Sbjct: 125 AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASK 163
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 99.5 bits (249), Expect = 3e-25
Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 19/154 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+V + GIGRA A L++ G + + +R E LK++ + DL
Sbjct: 23 LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR----------YVVCDLR--- 69
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTKLIL 236
++ + ++ V ILV N G ++ E + + + + + L
Sbjct: 70 KDLDLLFEKVK--EVDILVLNAG---GPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYL 124
Query: 237 PRMKDNGRGAIVNVSSISEASPWALFNVYAATKT 270
P MK+ G G IV ++S S SP + +
Sbjct: 125 PAMKEKGWGRIVAITSFSVISPIENLYTSNSARM 158
Score = 26.3 bits (59), Expect = 9.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 47 AALRVEYQKYGITVQHIAPAFVSTKM 72
L E YGITV +AP + T+
Sbjct: 165 KTLSFEVAPYGITVNCVAPGWTETER 190
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 99.6 bits (249), Expect = 4e-25
Identities = 54/159 (33%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLIS-RTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
VVTG T GIG A LA +G +IVL +++K + + HGV+ DLS
Sbjct: 8 VVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKG 67
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMT 232
+ ++ Q+G + ILVNN G + +L ED E WD L+LN+ T
Sbjct: 68 EAVRGLVDNAVRQMG--RIDILVNNAGIQHT---ALIEDFPTEKWDAILALNLSAVFHGT 122
Query: 233 KLILPRMKDNGRGAIVNVSSIS--EASPWALFNVYAATK 269
LP MK G G I+N++S AS + Y A K
Sbjct: 123 AAALPHMKKQGFGRIINIASAHGLVASANK--SAYVAAK 159
Score = 29.1 bits (66), Expect = 1.5
Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 47 AALRVEYQKYGITVQHIAPAFVSTKM 72
AL E GIT I P +V T +
Sbjct: 169 TAL--ETAGQGITANAICPGWVRTPL 192
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 99 bits (250), Expect = 4e-25
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG + GIG A A A+ G IV E + + ++ G+ D++
Sbjct: 38 LVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA-GINAHGYVCDVTDED 96
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT---LSLNVVFTTLM 231
G +A + +++++G + ILVNN G + + + + + LN F ++
Sbjct: 97 GIQAMVAQIESEVG--IIDILVNNAGIIR---RVPMIEMTAAQFRQVIDIDLNAPF--IV 149
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNV--YAATK 269
+K ++P M G G I+N+ S+ S V YAA K
Sbjct: 150 SKAVIPSMIKKGHGKIINICSM--MSELGRETVSAYAAAK 187
Score = 30.7 bits (70), Expect = 0.52
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
+ EY + I I P +++T
Sbjct: 196 NIASEYGEANIQCNGIGPGYIATPQT 221
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 99.1 bits (248), Expect = 5e-25
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 11/157 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG GIG+A A L + G + + K A EI G + VD+S
Sbjct: 6 LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVKVDVSDRD 64
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
AA+E + LG ++VNN G P + E E D ++NV +
Sbjct: 65 QVFAAVEQARKTLG--GFDVIVNNAG---VAPSTPIESITPEIVDKVYNINVKGVIWGIQ 119
Query: 234 LILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
+ K G G I+N S + VY+++K
Sbjct: 120 AAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSK 156
Score = 30.6 bits (70), Expect = 0.42
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
+ GITV P V T M
Sbjct: 169 DLAPLGITVNGYCPGIVKTPM 189
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 99.2 bits (248), Expect = 5e-25
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESL-HGVQTKIIAVDLS-- 174
++TG G+GRA A LA G + L+ + E L+ + + + D+S
Sbjct: 17 LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE 76
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTL 230
+A + A + G + NN G ++ TE +D +S+N+ VF L
Sbjct: 77 AQVEAYVTATTERFG--RIDGFFNNAG--IEGKQNPTESFTAAEFDKVVSINLRGVF--L 130
Query: 231 MTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ +L M++ G G +VN +S+ + YAA K
Sbjct: 131 GLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK 169
Score = 27.9 bits (63), Expect = 3.8
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A VEY +YGI + IAP + T M
Sbjct: 178 NSA---VEYGRYGIRINAIAPGAIWTPM 202
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 99.5 bits (249), Expect = 6e-25
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 17/158 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+VTG GIG A A LA G +++ + A +I G VD+S
Sbjct: 33 IVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVDVSDEQ 88
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
A ++A G V LV N G + DT E +D +++N+ + L
Sbjct: 89 QIIAMVDACVAAFG--GVDKLVANAGVVHLAS---LIDTTVEDFDRVIAINLRGAW--LC 141
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
TK PRM + G GAIVN+SS++ Y +K
Sbjct: 142 TKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSK 179
Score = 27.1 bits (61), Expect = 5.4
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 51 VEYQKYGITVQHIAPAFVSTKM 72
E + GI + PAFV T M
Sbjct: 191 AELRSSGIRSNTLLPAFVDTPM 212
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 98.7 bits (247), Expect = 6e-25
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG GIGRA+A R G + + +E+ ++ A EI G + +D++
Sbjct: 12 LITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GPAAYAVQMDVTRQD 67
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
AAI A G + ILVNN + + + +E+++ ++NV T +
Sbjct: 68 SIDAAIAATVEHAG--GLDILVNNAA---LFDLAPIVEITRESYEKLFAINVAGTLFTLQ 122
Query: 234 LILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
+M GR G I+N++S + AL +Y ATK
Sbjct: 123 AAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATK 159
Score = 29.4 bits (67), Expect = 1.2
Identities = 9/44 (20%), Positives = 17/44 (38%)
Query: 51 VEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 94
++ K+ I V IAP V + + + + P E+
Sbjct: 171 LDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRL 214
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 98.9 bits (247), Expect = 8e-25
Identities = 30/174 (17%), Positives = 52/174 (29%), Gaps = 24/174 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
V+TG IG + A L ++G +V+ + ++ E+ + + DLS
Sbjct: 15 VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 74
Query: 175 -----GTKAAIEAVKNQLGDHPVHILVNNVG--------SLSSYPKSLTEDTEKETWD-T 220
+ I+ G +LVNN +
Sbjct: 75 SSLLDCCEDIIDCSFRAFG--RCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 132
Query: 221 LSLNVVFTTLMTKLILPRMKDNG-----RGAIVNVSSISEASPWALFNVYAATK 269
N V + + R + G ++VN+ P F VY K
Sbjct: 133 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAK 186
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 98.3 bits (246), Expect = 9e-25
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
V+TG +GIGRA A A G +I + L + I +L G + + D+S
Sbjct: 11 VITGGANGIGRAIAERFAVEGADIAIAD--LVPAPEAEAAIRNL-GRRVLTVKCDVSQPG 67
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFTTLM 231
+A + V + G ILVNN G YP ++ E W +NV F LM
Sbjct: 68 DVEAFGKQVISTFG--RCDILVNNAGI---YPLIPFDELTFEQWKKTFEINVDSGF--LM 120
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
K +P MK NG G I+N++S + + Y +TK
Sbjct: 121 AKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTK 158
Score = 30.5 bits (70), Expect = 0.44
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A + K GITV IAP+ V T
Sbjct: 167 ALA---SDLGKDGITVNAIAPSLVRTAT 191
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 99.3 bits (248), Expect = 1e-24
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 14/160 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLH----GVQTKIIAVDL 173
+VTG GIG+A EL G N+V+ SR LE+LK A E+++ + I ++
Sbjct: 22 IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI 81
Query: 174 S---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTT 229
+++ + G ++ LVNN G S E + W L N+ T
Sbjct: 82 RNEEEVNNLVKSTLDTFG--KINFLVNNGG---GQFLSPAEHISSKGWHAVLETNLTGTF 136
Query: 230 LMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
M K + G+IVN+ + + + L A +
Sbjct: 137 YMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAAR 175
Score = 31.5 bits (72), Expect = 0.25
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFF 85
+L +E+ GI + +AP + ++ +Y +SFF
Sbjct: 184 SLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFF 221
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 98.4 bits (246), Expect = 1e-24
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL--ISRTLEKLKKTAKEIESLHGVQTKIIAVDLS- 174
+VTG GIGR + +LA G +I + + + E+ +T K IE+ + + +D++
Sbjct: 6 MVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQKAVFVGLDVTD 64
Query: 175 --GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLM 231
+AI+ +LG +LVNN G + K L E TE E S+NV
Sbjct: 65 KANFDSAIDEAAEKLG--GFDVLVNNAG--IAQIKPLLEVTE-EDLKQIYSVNVFSVFFG 119
Query: 232 TKLILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
+ + + G G I+N +SI+ + + + Y+ TK
Sbjct: 120 IQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTK 158
Score = 30.2 bits (69), Expect = 0.62
Identities = 9/21 (42%), Positives = 9/21 (42%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E G TV AP V T M
Sbjct: 171 ELAPKGHTVNAYAPGIVGTGM 191
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 98.4 bits (246), Expect = 1e-24
Identities = 36/165 (21%), Positives = 65/165 (39%), Gaps = 19/165 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLE-------KLKKTAKEIESLHGVQTKIIA 170
+TG + GIG A A AR G N+ + +++ + A + + G Q +
Sbjct: 10 FITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-GGQGLALK 68
Query: 171 VDLS---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVV 226
D+ +AA+ A + G + ILVNN ++ T DT + +D +N
Sbjct: 69 CDIREEDQVRAAVAATVDTFG--GIDILVNNASAIWL---RGTLDTPMKRFDLMQQVNAR 123
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSSISEASP--WALFNVYAATK 269
+ + + LP + I+ ++ +P W Y K
Sbjct: 124 GSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAK 168
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 97.7 bits (244), Expect = 2e-24
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 20/158 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
V+TG + GIG A A + G ++L++R +E+L ++L+ T VD++
Sbjct: 20 VITGASSGIGEAIARRFSEEGHPLLLLARRVERL-------KALNLPNTLCAQVDVTDKY 72
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVG--SLSSYPKSLTEDTEKETWDT-LSLNVVFTTLM 231
AI + G P +VNN G L + W +NV+
Sbjct: 73 TFDTAITRAEKIYG--PADAIVNNAGMMLLGQIDTQEANE-----WQRMFDVNVLGLLNG 125
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ +L MK G I+N+SSI+ + Y TK
Sbjct: 126 MQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTK 163
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 96.8 bits (242), Expect = 3e-24
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
++T GIG+A A AR G ++ KL++ K + +D++ K
Sbjct: 10 ILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGI------QTRVLDVT-KK 62
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLMTKL 234
I+ N++ + +L N G + D E++ WD +++LNV ++ LM K
Sbjct: 63 KQIDQFANEVE--RLDVLFNVAGFV---HHGTVLDCEEKDWDFSMNLNVRSMY--LMIKA 115
Query: 235 ILPRMKDNGRGAIVNVSSI-SEASPWALFNVYAATK 269
LP+M G I+N+SS+ S VY+ TK
Sbjct: 116 FLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK 151
Score = 28.2 bits (64), Expect = 2.4
Identities = 7/28 (25%), Positives = 11/28 (39%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
S A ++ + GI + P V T
Sbjct: 160 SVA---ADFIQQGIRCNCVCPGTVDTPS 184
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 96.5 bits (241), Expect = 5e-24
Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 16/156 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG + +G A L G +++ RT + E+ V + D S
Sbjct: 31 LITGASQRVGLHCALRLLEHGHRVIISYRTEHA---SVTELRQAGAV---ALYGDFSCET 84
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
G A I+ +K Q + +V+N + + + + S++++ L+
Sbjct: 85 GIMAFIDLLKTQTS--SLRAVVHNASE---WLAETPGEEA-DNFTRMFSVHMLAPYLINL 138
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
P + + IV++S + Y ATK
Sbjct: 139 HCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATK 174
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 96.4 bits (241), Expect = 5e-24
Identities = 48/158 (30%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
VV G IGRA A A+ G N+VL + E EIE L G I DL+
Sbjct: 12 VVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-GRSALAIKADLTNA 70
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMT 232
+AAI A ++ G +H LV+ G L + + ++ W L +N+ L
Sbjct: 71 AEVEAAISAAADKFG--EIHGLVHVAGGL--IARKTIAEMDEAFWHQVLDVNLTSLFLTA 126
Query: 233 KLILPRMKDNGRGAIVNVSSI-SEASPWALFNVYAATK 269
K LP+M G IV SS YA +K
Sbjct: 127 KTALPKMAKGGA--IVTFSSQAGRDGGGPGALAYATSK 162
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 96.2 bits (240), Expect = 6e-24
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
VVTG + GIGR A +L + G + + R L+ L+ A+E +SL G Q + D S
Sbjct: 9 VVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GGQCVPVVCDSSQES 67
Query: 175 GTKAAIEAV-KNQLGDHPVHILVNNVGSLSSYPKS----LTEDTEKETWD-TLSLNVVFT 228
++ E V + Q G + +LVNN + + +T WD ++ +
Sbjct: 68 EVRSLFEQVDREQQG--RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGH 125
Query: 229 TLMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ M G+G IV +SS + + Y K
Sbjct: 126 YFCSVYGARLMVPAGQGLIVVISSPG-SLQYMFNVPYGVGK 165
Score = 29.1 bits (66), Expect = 1.4
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 47 AALRVEYQKYGITVQHIAPAFVSTKM 72
A E +++G++ + P V T++
Sbjct: 173 ADCAHELRRHGVSCVSLWPGIVQTEL 198
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 95.8 bits (239), Expect = 8e-24
Identities = 35/158 (22%), Positives = 64/158 (40%), Gaps = 15/158 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI--SRTLEKLKKTAKEIESLHGVQTKIIAVDLS- 174
+VTG + GIG++ L + V+ +R+ LKK ++ G + + D++
Sbjct: 6 LVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGDITE 61
Query: 175 --GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLM 231
K + A G + LV N G L P + + W +N +
Sbjct: 62 DSVLKQLVNAAVKGHG--KIDSLVANAGVLE--PVQNVNEIDVNAWKKLYDINFFSIVSL 117
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ LP +K G +V VSS + ++ + Y ++K
Sbjct: 118 VGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSK 154
Score = 26.5 bits (59), Expect = 9.0
Identities = 7/25 (28%), Positives = 10/25 (40%), Gaps = 2/25 (8%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
L E + + +AP V T M
Sbjct: 163 TLANE--ERQVKAIAVAPGIVDTDM 185
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 95.3 bits (238), Expect = 1e-23
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG T GIG A LAR G NIVL EI HGV+ DLS
Sbjct: 8 LVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIAR-HGVKAVHHPADLSDVA 64
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
+A + + G V ILVNN G + E E+WD ++LN+ T+
Sbjct: 65 QIEALFALAEREFG--GVDILVNNAGIQHV---APVEQFPLESWDKIIALNLSAVFHGTR 119
Query: 234 LILPRMKDNGRGAIVNVSSI 253
L LP M+ G I+N++S+
Sbjct: 120 LALPGMRARNWGRIINIASV 139
Score = 29.5 bits (67), Expect = 1.1
Identities = 7/26 (26%), Positives = 10/26 (38%), Gaps = 2/26 (7%)
Query: 47 AALRVEYQKYGITVQHIAPAFVSTKM 72
L E +T I P +V T +
Sbjct: 165 VGL--ETATSNVTCNAICPGWVLTPL 188
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 95.7 bits (239), Expect = 1e-23
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 18/158 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
VVTG GIG G +V+ + + +E+ + D++
Sbjct: 13 VVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILC-----DVTQED 67
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
K + + G + +VNN G P E+T + + L LN+ + +
Sbjct: 68 DVKTLVSETIRRFG--RLDCVVNNAG--HHPPPQRPEETSAQGFRQLLELNLLGTY--TL 121
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
TKL LP ++ +G ++N+SS+ A A Y ATK
Sbjct: 122 TKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATK 158
Score = 26.7 bits (60), Expect = 8.0
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 51 VEYQKYGITVQHIAPAFVSTKM 72
++ YG+ V I+P + T +
Sbjct: 170 LDESPYGVRVNCISPGNIWTPL 191
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 95.3 bits (238), Expect = 2e-23
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 24/158 (15%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+VTG + GIG A L R G +V +S + + + +D++
Sbjct: 18 IVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK-----------IDVTNEE 66
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
K A+E + G + ILVNN G S T E W + +NV + LM
Sbjct: 67 EVKEAVEKTTKKYG--RIDILVNNAG---IEQYSPLHLTPTEIWRRIIDVNVNGSY--LM 119
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
K +P M G G+I+N++S+ + Y +K
Sbjct: 120 AKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSK 157
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 94.9 bits (237), Expect = 2e-23
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG G+G A + G +VL E+ TA+E+ G + +D++
Sbjct: 9 IITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEE 64
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+ + + + G V LVNN G + E E + + +N+ VF +
Sbjct: 65 DWQRVVAYAREEFG--SVDGLVNNAGISTGMF---LETESVERFRKVVEINLTGVF--IG 117
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
K ++P MKD G G+IVN+SS + AL + Y A+K
Sbjct: 118 MKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASK 155
Score = 28.6 bits (65), Expect = 2.1
Identities = 8/28 (28%), Positives = 9/28 (32%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
A VE I V + P T M
Sbjct: 164 LAA---VELGTDRIRVNSVHPGMTYTPM 188
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 94.5 bits (236), Expect = 2e-23
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG T GIG A A + G +++ R + +K AK + + Q + D S
Sbjct: 10 IITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDED 67
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
G +A + G PV LVNN G + E+T W L++N+ VF
Sbjct: 68 GWTKLFDATEKAFG--PVSTLVNNAGIAVNKS---VEETTTAEWRKLLAVNLDGVF--FG 120
Query: 232 TKLILPRMKDNGRG-AIVNVSSISEASPWALFNVYAATK 269
T+L + RMK+ G G +I+N+SSI Y A+K
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK 159
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 94.5 bits (236), Expect = 2e-23
Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 23/159 (14%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+VTG + GIGRA A L RG + + SR E+ + + + DL
Sbjct: 6 LVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---------SLGAVPLPTDLEKDD 56
Query: 177 -KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT---LSLNVVFTTLMT 232
K ++ LG +H+LV+ + + E W L L+V F L+
Sbjct: 57 PKGLVKRALEALG--GLHVLVHAAAVNV---RKPALELSYEEWRRVLYLHLDVAF--LLA 109
Query: 233 KLILPRMKDNGRGAIVNVSSISEASPWALFNV--YAATK 269
+ P M + G G ++ + S++ + + Y K
Sbjct: 110 QAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAK 148
Score = 30.1 bits (69), Expect = 0.55
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
AL E+ + GI V + P +V T+
Sbjct: 157 ALAKEWARLGIRVNLLCPGYVETEFT 182
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 93.0 bits (232), Expect = 4e-23
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
++TG T G+G A+A L G +++L R L + A+E+ G + + DL+ +
Sbjct: 4 LITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREV----GARA--LPADLA-DE 54
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTKLIL 236
+A+ + G P+ +LV+ VG ++ + ++ + L+ ++ L +L
Sbjct: 55 LEAKALLEEAG--PLDLLVHAVGK---AGRASVREAGRDLVEEMLAAHL----LTAAFVL 105
Query: 237 PRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ V + F YAA K
Sbjct: 106 KHARFQKGARAVFFGAYPRYVQVPGFAAYAAAK 138
Score = 34.1 bits (79), Expect = 0.029
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVSTL 100
A R E + G+ + + V+T + + E+ AR + L
Sbjct: 147 AARKELLREGVHLVLVRLPAVATGLWA---PLGGPPKGALSPEEAARKVLEGL 196
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 94.6 bits (236), Expect = 4e-23
Identities = 35/160 (21%), Positives = 58/160 (36%), Gaps = 17/160 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
++TG G+GRA G + ++ ++ E+L++ G + D+
Sbjct: 9 LITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GGNAVGVVGDVRSLQ 64
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYP--KSLTEDTEKETWD-TLSLNV--VFTT 229
K A E G + L+ N G L ED +D +NV
Sbjct: 65 DQKRAAERCLAAFG--KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYI-- 120
Query: 230 LMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
K LP + + G++V S + P +Y ATK
Sbjct: 121 HAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATK 159
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 93.8 bits (234), Expect = 6e-23
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 20/163 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+VTG + GIG+ A L G + + +R E TA + + Q I DLS ++
Sbjct: 33 LVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQA--IPADLS-SE 89
Query: 178 AAIEAVKNQLGDH--PVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFTTLMT 232
A + LG+ + ILVNN G+ E W+ + LNV VF
Sbjct: 90 AGARRLAQALGELSARLDILVNNAGTSWGAA---LESYPVSGWEKVMQLNVTSVF--SCI 144
Query: 233 KLILPRMK----DNGRGAIVNVSSIS--EASPWALFNVYAATK 269
+ +LP ++ ++N+ S++ A + Y +K
Sbjct: 145 QQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYA-YGPSK 186
Score = 31.4 bits (72), Expect = 0.27
Identities = 8/28 (28%), Positives = 10/28 (35%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNF 75
L E I V IAP ++M
Sbjct: 195 MLAKELVGEHINVNVIAPGRFPSRMTRH 222
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 93.4 bits (233), Expect = 7e-23
Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 15/156 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+V G T G+G A L G ++L R + + +E G + + D++
Sbjct: 12 IVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----GPRVHALRSDIADLN 67
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
A LG + +L N G + + ++D ++N +
Sbjct: 68 EIAVLGAAAGQTLG--AIDLLHINAG---VSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 122
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ P +++ G IV SS+++ +VY+A+K
Sbjct: 123 RLTPLIREGGS--IVFTSSVADEGGHPGMSVYSASK 156
Score = 27.5 bits (62), Expect = 4.5
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 3/30 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKMNN 74
AA E GI V ++P F+ T
Sbjct: 165 VLAA---ELLPRGIRVNSVSPGFIDTPTKG 191
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 93.4 bits (233), Expect = 7e-23
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG + GIG A A LA G +V+ + ++ A +IE+ G + D+S
Sbjct: 31 IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-GGKALTAQADVSDP 89
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTL 230
+ + G V +LVNN G P + +T +D +++N+ F
Sbjct: 90 AAVRRLFATAEEAFG--GVDVLVNNAG---IMPLTTIAETGDAVFDRVIAVNLKGTF--N 142
Query: 231 MTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ R++ GR I+N+S+ + +YAA K
Sbjct: 143 TLREAAQRLRVGGR--IINMSTSQVGLLHPSYGIYAAAK 179
Score = 26.4 bits (59), Expect = 9.1
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 57 GITVQHIAPAFVSTKMN 73
ITV +AP +T +
Sbjct: 197 DITVNAVAPGPTATDLF 213
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 94.3 bits (235), Expect = 7e-23
Identities = 37/157 (23%), Positives = 60/157 (38%), Gaps = 11/157 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
VVTG GIG A A E ARRG +VL L++ + G + D+
Sbjct: 35 VVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG-QGFDAHGVVCDVRHLD 93
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
+ LG V ++ +N G + + P + W + +++ + +
Sbjct: 94 EMVRLADEAFRLLG--GVDVVFSNAGIVVAGP---LAQMNHDDWRWVIDIDLWGSIHAVE 148
Query: 234 LILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
LPR+ + G G I +S + P A Y K
Sbjct: 149 AFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAK 185
Score = 35.0 bits (81), Expect = 0.017
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVSTLG 101
L E + GI V + P V TK+ + S R+R + + + A + T
Sbjct: 194 TLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQD 247
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 93.4 bits (233), Expect = 8e-23
Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 18/159 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG + GIG A A L + G + + + + + + VD++
Sbjct: 16 IVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL----ENGGFAVEVDVTKRA 71
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
AA++ + LG +L N G D E WD +N VF L
Sbjct: 72 SVDAAMQKAIDALG--GFDLLCANAG---VSTMRPAVDITDEEWDFNFDVNARGVF--LA 124
Query: 232 TKLILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
++ + G IVN +S++ L Y+A+K
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASK 163
Score = 31.4 bits (72), Expect = 0.29
Identities = 11/47 (23%), Positives = 14/47 (29%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 94
AL E I V + P FV T M + + A
Sbjct: 172 ALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAE 218
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 93.0 bits (232), Expect = 8e-23
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
VVTG T G+G +L+R I + + R E L A+ I D+ +
Sbjct: 9 VVTGATGGMGIEIVKDLSRDHI-VYALGRNPEHLAALAEIEGVE------PIESDIV-KE 60
Query: 178 AAIEAVKNQLGDH-PVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTKLI 235
E ++L + V LV+ + E W L LNV+ +++ +
Sbjct: 61 VLEEGGVDKLKNLDHVDTLVHAAA---VARDTTIEAGSVAEWHAHLDLNVIVPAELSRQL 117
Query: 236 LPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
LP ++ G ++ ++S + P +YAA+K
Sbjct: 118 LPALRA-ASGCVIYINSGAGNGPHPGNTIYAASK 150
Score = 30.6 bits (70), Expect = 0.38
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
A R E GI V ++P +T M
Sbjct: 159 AFRKEEANNGIRVSTVSPGPTNTPM 183
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 93.5 bits (233), Expect = 8e-23
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 16/160 (10%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
VTG + GIG A A LA RGI + +R + + + + G + D++
Sbjct: 28 FVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA-AGHDVDGSSCDVTSTD 86
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT---LSLNVVFTTLM 231
AA+ A + G P+ ILVN+ G T D + W +L VF +
Sbjct: 87 EVHAAVAAAVERFG--PIGILVNSAGRNGG---GETADLDDALWADVLDTNLTGVF--RV 139
Query: 232 TKLILP--RMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
T+ +L M++ G G IVN++S Y A+K
Sbjct: 140 TREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASK 179
Score = 29.9 bits (68), Expect = 0.85
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
++ E K GITV + P +V T M
Sbjct: 188 SVGFELAKTGITVNAVCPGYVETPM 212
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 93.1 bits (232), Expect = 1e-22
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 25/162 (15%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLH-GVQTKIIAVDLS-- 174
+VTG GIGRA+A L +G + L+ LE + + +T I D++
Sbjct: 11 LVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ 70
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTL 230
+ V + G + ILVNN G + + + W+ TL +N+ V
Sbjct: 71 QQLRDTFRKVVDHFG--RLDILVNNAG--------VNNE---KNWEKTLQINLVSVI--S 115
Query: 231 MTKLILPRMKDNGRG---AIVNVSSISEASPWALFNVYAATK 269
T L L M G I+N+SS++ P A VY A+K
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASK 157
Score = 35.3 bits (82), Expect = 0.014
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 47 AALRVEYQKYGITVQHIAPAFVSTKM 72
AAL G+ + I P FV+T +
Sbjct: 167 AALAANLMNSGVRLNAICPGFVNTAI 192
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 93.4 bits (233), Expect = 1e-22
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 16/162 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG GIG A LA G +I + E + E+ L G + + DL+
Sbjct: 33 IVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-GARVIFLRADLADL 91
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFTTL 230
+A ++AV + G + LVNN G S + E +DT + +N+
Sbjct: 92 SSHQATVDAVVAEFG--RIDCLVNNAGIASIVRDDFLDLKP-ENFDTIVGVNLRGTV--F 146
Query: 231 MTKLILPRM---KDNGRGAIVNVSSISEASPWALFNVYAATK 269
T+ +L M +I+N++S+S Y +K
Sbjct: 147 FTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSK 188
Score = 29.1 bits (66), Expect = 1.3
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 52 EYQKYGITVQHIAPAFVSTKMN 73
+ GI V + P + + M
Sbjct: 201 RLAETGIAVFEVRPGIIRSDMT 222
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 93.6 bits (233), Expect = 1e-22
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 16/163 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLH-GVQTKIIAVDLS-- 174
VTG +G+G +L +G + + + + K +E+ G + + +D++
Sbjct: 12 FVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR 71
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMT 232
G K A + V+ + G PV IL NN G E++ + WD L +N+
Sbjct: 72 EGFKMAADEVEARFG--PVSILCNNAGVNLF---QPIEESSYDDWDWLLGVNLHGVVNGV 126
Query: 233 KLILPRMKD------NGRGAIVNVSSISEASPWALFNVYAATK 269
+PRM + G +VN +S++ +Y TK
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTK 169
Score = 30.1 bits (68), Expect = 0.67
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSA 96
+L KY I V + P V + + S +R + +
Sbjct: 178 SLHYSLLKYEIGVSVLCPGLVKSYIYA-SDDIRPDALKGEVKPVDKTAV 225
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 92.2 bits (230), Expect = 2e-22
Identities = 42/158 (26%), Positives = 59/158 (37%), Gaps = 25/158 (15%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG GIG A L G + + R + + + DL
Sbjct: 32 LVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLH------------LPGDLREAA 79
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
AV LG + I+VNN G +S +T W +L +NV F +
Sbjct: 80 YADGLPGAVAAGLG--RLDIVVNNAGVISR---GRITETTDADWSLSLGVNVEAPF--RI 132
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ +P M G GAIVNV+S P +Y TK
Sbjct: 133 CRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTK 170
Score = 28.3 bits (64), Expect = 2.6
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKM 72
+ +++ GI + + P V+T M
Sbjct: 179 CMGMDHAPQGIRINAVCPNEVNTPM 203
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 92.2 bits (230), Expect = 2e-22
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 15/160 (9%)
Query: 118 VVTGCTD-GIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VT GIG A G ++V+ +L +T ++ L + + + D++
Sbjct: 26 LVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTST 85
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFTTL 230
A I + G + +LVNN G ++ D E WD L++ + V
Sbjct: 86 EAVDALITQTVEKAG--RLDVLVNNAG---LGGQTPVVDMTDEEWDRVLNVTLTSVM--R 138
Query: 231 MTKLILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
T+ L + G IVN +S+ + YAA K
Sbjct: 139 ATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAK 178
Score = 29.4 bits (67), Expect = 1.1
Identities = 5/28 (17%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
A +E ++G+ + ++P+ K
Sbjct: 187 CSA---IEAVEFGVRINAVSPSIARHKF 211
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 92.7 bits (231), Expect = 2e-22
Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 18/160 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG GIGR A EL RRG +++ + + E ++ I+ G + ++
Sbjct: 33 LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANVGVV 91
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTL 230
E G + I+ +N G +D E +D ++N F
Sbjct: 92 EDIVRMFEEAVKIFG--KLDIVCSNSG---VVSFGHVKDVTPEEFDRVFTINTRGQF--F 144
Query: 231 MTKLILPRMKDNGRGAIVNVSSI-SEASPWALFNVYAATK 269
+ + ++ GR ++ + SI +A VY+ +K
Sbjct: 145 VAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSK 182
Score = 28.4 bits (64), Expect = 2.4
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Query: 52 EYQKYGITVQHIAPAFVSTKMN---NFSYRVRNKSFFVPDAEQYARSAVSTLG 101
+ ITV +AP + T M Y ++ + ++YA S L
Sbjct: 195 DMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR 247
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 92.2 bits (230), Expect = 2e-22
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
VTG + GIG A A LA G + L E+ + EIE G + I D
Sbjct: 35 FVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-GGRAVAIRADNRDA 93
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTL 230
+ AI LG + ILVN+ G + + E+T +D +++N F +
Sbjct: 94 EAIEQAIRETVEALG--GLDILVNSAG---IWHSAPLEETTVADFDEVMAVNFRAPF--V 146
Query: 231 MTKLILPRMKDNGRGAIVNVSS-ISEASPWALFNVYAATK 269
+ + D GR I+ + S ++E PW ++Y+A+K
Sbjct: 147 AIRSASRHLGDGGR--IITIGSNLAELVPWPGISLYSASK 184
Score = 26.8 bits (60), Expect = 7.2
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 52 EYQKYGITVQHIAPAFVSTKMN 73
+ GITV + P T MN
Sbjct: 197 DLGPRGITVNIVHPGSTDTDMN 218
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 91.8 bits (229), Expect = 3e-22
Identities = 44/158 (27%), Positives = 61/158 (38%), Gaps = 19/158 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
V+TG T GIG A A G + + R + L EI G I D +
Sbjct: 33 VITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GGGAVGIQADSANLA 88
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
E VK + G + +L N G L E TE E +D T NV V
Sbjct: 89 ELDRLYEKVKAEAG--RIDVLFVNAG--GGSMLPLGEVTE-EQYDDTFDRNVKGVL--FT 141
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ LP + +V S + ++ F+VYAA+K
Sbjct: 142 VQKALPLLARGSS--VVLTGSTAGSTGTPAFSVYAASK 177
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 91.4 bits (228), Expect = 3e-22
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+V+G G+G ++ + G +V E+ K A E+ + + +D++
Sbjct: 11 LVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL----ADAARYVHLDVTQPA 66
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
KAA++ G +H+LVNN G L+ ED W L +N+ L +
Sbjct: 67 QWKAAVDTAVTAFG--GLHVLVNNAGILNIGT---IEDYALTEWQRILDVNLTGVFLGIR 121
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
++ MK+ GRG+I+N+SSI + + Y ATK
Sbjct: 122 AVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATK 157
Score = 27.9 bits (63), Expect = 3.5
Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
S A +E GI V I P V T M
Sbjct: 166 STA---LELGPSGIRVNSIHPGLVKTPM 190
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 91.5 bits (228), Expect = 4e-22
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 26/165 (15%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
VVTG T GIGR A AR G N+ + R+ + +++ L + + D+S
Sbjct: 14 VVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRA 73
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT-LSLNVVFT 228
A + G + ++ N G + D E + ++NV T
Sbjct: 74 QCDALAGRAVEEFG--GIDVVCANAG--------VFPDAPLATMTPEQLNGIFAVNVNGT 123
Query: 229 TLMTKLILPRMKDNGRGAIVNVSSISEASP----WALFNVYAATK 269
+ L + +G G +V SSI+ W+ + Y ATK
Sbjct: 124 FYAVQACLDALIASGSGRVVLTSSITGPITGYPGWS--H-YGATK 165
Score = 29.1 bits (66), Expect = 1.3
Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A E + ITV I P + T+
Sbjct: 174 TAAI---ELAPHKITVNAIMPGNIMTEG 198
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 91.4 bits (228), Expect = 5e-22
Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 16/146 (10%)
Query: 118 VVTGCTD--GIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS 174
VVTG + G+G A A G + + + + ++ KE+E +G++ K +
Sbjct: 24 VVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVD 83
Query: 175 ---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFT 228
+ ++ V G + + N G+ + S D E W+ + +++ F
Sbjct: 84 SYESCEKLVKDVVADFG--QIDAFIANAGATAD---SGILDGSVEAWNHVVQVDLNGTF- 137
Query: 229 TLMTKLILPRMKDNGRGAIVNVSSIS 254
K + K+ G G++V +S+S
Sbjct: 138 -HCAKAVGHHFKERGTGSLVITASMS 162
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 91.1 bits (227), Expect = 5e-22
Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 20/165 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTL-EKLKKTAKEIESLHGVQTKIIAVDLS-- 174
++TG + GIG A A AR G + L R + +T + + G A DL+
Sbjct: 11 LITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-GGDAAFFAADLATS 69
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTL 230
+ ++ + G + +L+NN G L + + + +D + N+ V +
Sbjct: 70 EACQQLVDEFVAKFG--GIDVLINNAGGLV--GRKPLPEIDDTFYDAVMDANIRSVV--M 123
Query: 231 MTKLILPRMKDNGR-----GAIVNVSSIS-EASPWALFNVYAATK 269
TK LP + + A+++ SI+ +Y A K
Sbjct: 124 TTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAK 168
Score = 28.7 bits (65), Expect = 1.7
Identities = 6/29 (20%), Positives = 12/29 (41%), Gaps = 3/29 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKMN 73
+W + K G+ ++P V T +
Sbjct: 177 NWVD---FHTKDGVRFNIVSPGTVDTAFH 202
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 91.1 bits (227), Expect = 6e-22
Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 21/166 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG GIG A+ +A G N+ +I R+ + +++ GV+TK D+S
Sbjct: 18 IVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTD 77
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFTTLM 231
I+ + LG P+ L+ N G + E + +NV VF
Sbjct: 78 IVTKTIQQIDADLG--PISGLIANAGVSVV---KPATELTHEDFAFVYDVNVFGVF--NT 130
Query: 232 TKLILPRMKDNGR-GAIVNVSSIS---EASPWALFNV----YAATK 269
+ + + G+IV SS+S ++ Y ++K
Sbjct: 131 CRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSK 176
Score = 30.6 bits (70), Expect = 0.47
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNF 75
L E+ GI V ++P +V+T
Sbjct: 185 GLAAEWASAGIRVNALSPGYVNTDQTAH 212
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 90.8 bits (226), Expect = 6e-22
Identities = 22/156 (14%), Positives = 46/156 (29%), Gaps = 23/156 (14%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
+V G + +G + N + I + + SG
Sbjct: 26 LVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS-------------FTIKDSGEE 72
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
K+ IE + ++ V V G S + + D ++ + +N+
Sbjct: 73 EIKSVIEKINSKSI--KVDTFVCAAGGWS--GGNASSDEFLKSVKGMIDMNLYSAFASAH 128
Query: 234 LILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ + G V + + + + Y ATK
Sbjct: 129 IGAKLLN--QGGLFVLTGASAALNRTSGMIAYGATK 162
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 91.2 bits (227), Expect = 9e-22
Identities = 36/174 (20%), Positives = 58/174 (33%), Gaps = 24/174 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRT-LEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
VVTG IGRA A +L + G +V+ E A E+ + DL+
Sbjct: 27 VVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNS 86
Query: 175 -----GTKAAIEAVKNQLGDHPVHILVNNVGS-------LSSYPKSLTEDTEKETWDT-L 221
+ I + G +LVNN + + + T + +
Sbjct: 87 NVLPASCEEIINSCFRAFG--RCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELI 144
Query: 222 SLNVVFTTLMTKLILPRMKD------NGRGAIVNVSSISEASPWALFNVYAATK 269
N + L+T R K + +IVN+ P F++Y K
Sbjct: 145 GTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGK 198
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 90.4 bits (225), Expect = 1e-21
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 18/160 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+ TG GIGR A EL RRG ++V+ + + ++ E++ L G Q I D+S
Sbjct: 25 LTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADISKP 83
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTL 230
A + + G + +++N G + +E +D +LN F
Sbjct: 84 SEVVALFDKAVSHFG--GLDFVMSNSG---MEVWCDELEVTQELFDKVFNLNTRGQF--F 136
Query: 231 MTKLILPRMKDNGRGAIVNVSSIS-EASPWALFNVYAATK 269
+ + L + GR I+ SSI+ + +YA +K
Sbjct: 137 VAQQGLKHCRRGGR--IILTSSIAAVMTGIPNHALYAGSK 174
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 89.9 bits (224), Expect = 1e-21
Identities = 44/158 (27%), Positives = 58/158 (36%), Gaps = 20/158 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG GIGRA A AR G + L E K+ A+ I VDL
Sbjct: 10 LVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGA------FFQVDLEDER 62
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+E LG V +LVNN W L +N+ +
Sbjct: 63 ERVRFVEEAAYALG--RVDVLVNNAAIA---APGSALTVRLPEWRRVLEVNLTAPM--HL 115
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ L M+ G GAIVNV+S+ Y A+K
Sbjct: 116 SALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASK 153
Score = 29.4 bits (67), Expect = 1.2
Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
S A ++ I V +AP ++T+
Sbjct: 162 SLA---LDLAPLRIRVNAVAPGAIATEA 186
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 90.0 bits (224), Expect = 1e-21
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG GIG A A L R G +V+ + + + +K EI++L G I D+
Sbjct: 22 LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GSDAIAIKADIRQV 80
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTL 230
+ G + I V+N G +D +E +D SLN F
Sbjct: 81 PEIVKLFDQAVAHFG--HLDIAVSNSG---VVSFGHLKDVTEEEFDRVFSLNTRGQF--F 133
Query: 231 MTKLILPRMKDNGRGAIVNVSSI-SEASPWALFNVYAATK 269
+ + + + GR IV SS S+ ++Y+ +K
Sbjct: 134 VAREAYRHLTEGGR--IVLTSSNTSKDFSVPKHSLYSGSK 171
Score = 27.2 bits (61), Expect = 5.0
Identities = 11/47 (23%), Positives = 16/47 (34%)
Query: 52 EYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVS 98
+ ITV +AP T M + + AEQ + A
Sbjct: 184 DCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAH 230
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 89.9 bits (224), Expect = 2e-21
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG + GIGRA A LA G + + E+ ++T EI+S G I +L
Sbjct: 11 LVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANLESL 69
Query: 175 -GTKAAIEAVKNQLGDHP----VHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--V 226
G +A ++ N+L + IL+NN G P + E+T ++ +D +S+N
Sbjct: 70 HGVEALYSSLDNELQNRTGSTKFDILINNAG---IGPGAFIEETTEQFFDRMVSVNAKAP 126
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
F + + L R++DN R I+N+SS + F Y+ TK
Sbjct: 127 F--FIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSMTK 165
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 89.5 bits (223), Expect = 2e-21
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG G+G L G + ++ A E+ G ++ + D+S
Sbjct: 10 LVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEA 65
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+ AV+ +LG +++LVNN G L E E + L +N VF +
Sbjct: 66 DWTLVMAAVQRRLG--TLNVLVNNAGILLPGD---METGRLEDFSRLLKINTESVF--IG 118
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ + MK+ G G+I+N++S+S P + Y+A+K
Sbjct: 119 CQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASK 155
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 90.0 bits (224), Expect = 2e-21
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 34/169 (20%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG T GIG A L + G+ + + +R E L+ T KE+ GV+ D+
Sbjct: 26 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDVRSVP 84
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNVV 226
+A + AV + G PV +LVNN G E W +L V
Sbjct: 85 EIEALVAAVVERYG--PVDVLVNNAG--------RPGGGATAELADELWLDVVETNLTGV 134
Query: 227 FTTLMTKLILP--RMKDNGRGAIVNVSSISEASPWALFNV----YAATK 269
F +TK +L M + G G IVN++S V Y+A+K
Sbjct: 135 F--RVTKQVLKAGGMLERGTGRIVNIASTG----GKQGVVHAAPYSASK 177
Score = 29.1 bits (66), Expect = 1.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E + GITV + P FV T M
Sbjct: 190 ELARTGITVNAVCPGFVETPM 210
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 89.5 bits (223), Expect = 3e-21
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 28/172 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-------------SRTLEKLKKTAKEIESLHGV 164
+TG G GRA+A +A G +I+ + + + L +T + +E+ +
Sbjct: 15 FITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR- 73
Query: 165 QTKIIAV-----DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD 219
+I+A D + ++ LG + I+V N G +D E +
Sbjct: 74 --RIVAAVVDTRDFDRLRKVVDDGVAALG--RLDIIVANAGVA---APQAWDDITPEDFR 126
Query: 220 -TLSLNVVFTTLMTKLILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
+ +NV T PR+ + GR G+I+ +SS + Y A+K
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASK 178
Score = 29.1 bits (66), Expect = 1.4
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKMNN 74
++A E K+ I V + P V+T M +
Sbjct: 187 AFA---AELGKHSIRVNSVHPGPVNTPMGS 213
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 89.6 bits (223), Expect = 3e-21
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 19/146 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG T GIGR A AR G N+ + +R+ +L E+ L + +D+S
Sbjct: 45 LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPG 104
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT-LSLNVVFT 228
A V + G + ++ N G + + E L +NV T
Sbjct: 105 SCADAARTVVDAFG--ALDVVCANAG--------IFPEARLDTMTPEQLSEVLDVNVKGT 154
Query: 229 TLMTKLILPRMKDNGRGAIVNVSSIS 254
+ L + +GRG ++ SSI+
Sbjct: 155 VYTVQACLAPLTASGRGRVILTSSIT 180
Score = 29.1 bits (66), Expect = 1.5
Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A E G+TV I P + T+
Sbjct: 205 TAAI---ELAPRGVTVNAILPGNILTEG 229
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 89.0 bits (221), Expect = 4e-21
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 118 VVTGCTDGIGRAYAHELARR-GINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT 176
+VTG GIG A +L R ++VL +R + + + +++++ G+ + +D+
Sbjct: 8 LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-GLSPRFHQLDIDDL 66
Query: 177 ---KAAIEAVKNQLGDHPVHILVNNVG-SLSSYPKSLTEDTEKETWDTLSLNVVFTTLMT 232
+A + ++ + G + +LVNN G + + + T T N T +
Sbjct: 67 QSIRALRDFLRKEYG--GLDVLVNNAGIAFKVADPTPFHIQAEVTMKT---NFFGTRDVC 121
Query: 233 KLILPRMKDNGRGAIVNVSSIS 254
+LP +K GR +VNVSSI
Sbjct: 122 TELLPLIKPQGR--VVNVSSIM 141
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 88.4 bits (220), Expect = 6e-21
Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 25/158 (15%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG + GIGRA A G ++ +S + I D++
Sbjct: 12 IVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPD 59
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
KA+I+ + + G + +LVNN G E W + +N+ +
Sbjct: 60 QVKASIDHIFKEYG--SISVLVNNAGI---ESYGKIESMSMGEWRRIIDVNLFGYY--YA 112
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+K +P M + +IVN+SS+ + + Y +K
Sbjct: 113 SKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSK 150
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 88.4 bits (220), Expect = 9e-21
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 24/147 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG GIGR A LA+ +++ ISRT + EI+S G ++ A D+S
Sbjct: 48 LVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDVSKKE 106
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNVV 226
I + + V ILVNN G +T D + + W+ +LN +
Sbjct: 107 EISEVINKILTEHK--NVDILVNNAG--------ITRDNLFLRMKNDEWEDVLRTNLNSL 156
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSSI 253
F +T+ I RM +N G I+N+SSI
Sbjct: 157 F--YITQPISKRMINNRYGRIINISSI 181
Score = 27.9 bits (63), Expect = 3.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E ITV IAP F+S+ M
Sbjct: 210 ELASRNITVNAIAPGFISSDM 230
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 88.0 bits (219), Expect = 9e-21
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 34/177 (19%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI----------------SRTLEKLKKTAKEIESL 161
VTG G GR++A LA+ G +I+ + + T E L +TA ++
Sbjct: 15 FVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH 74
Query: 162 HGVQTKIIAV-----DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKE 216
+ +I+ D KAA+++ QLG + I+V N G + + T +E
Sbjct: 75 NR---RIVTAEVDVRDYDALKAAVDSGVEQLG--RLDIIVANAGIGN--GGDTLDKTSEE 127
Query: 217 TWD-TLSLNV--VFTTLMTKLILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
W + +N+ V+ K +P M GR G+I+ SS+ + Y A K
Sbjct: 128 DWTEMIDINLAGVW--KTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAK 182
Score = 28.7 bits (65), Expect = 2.1
Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM--NNFSYRVRNKSFFVPDAEQYA 93
++ VE ++ I V + P V T M N ++++ P + A
Sbjct: 191 AFG---VELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA 238
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 87.6 bits (218), Expect = 1e-20
Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 14/161 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL-ISRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG + GIG A AR+G + + + E I G + I D+
Sbjct: 30 LVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGEAVAIPGDVGNA 88
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMT 232
A AV Q G + LVNN G + ++ E + L +NV + L
Sbjct: 89 ADIAAMFSAVDRQFG--RLDGLVNNAGIVD--YPQRVDEMSVERIERMLRVNVTGSILCA 144
Query: 233 KLILPRMKDNGR---GAIVNVSSISEASPWA-LFNVYAATK 269
+ RM GAIVNVSS++ A + YAA+K
Sbjct: 145 AEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK 185
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 87.2 bits (217), Expect = 1e-20
Identities = 24/158 (15%), Positives = 52/158 (32%), Gaps = 19/158 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VT G A L+ G + + ++ + +
Sbjct: 5 IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-------AFAETYPQLKPMSEQ 57
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT---LSLNVVFTTLM 231
IEAV + G V +LV+N + + + + ++ + F +
Sbjct: 58 EPAELIEAVTSAYG--QVDVLVSNDI-FAPEFQPIDKYAVED-YRGAVEALQIRPF--AL 111
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ +MK G I+ ++S + PW + Y + +
Sbjct: 112 VNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSAR 149
Score = 29.8 bits (68), Expect = 0.72
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMN 73
AL E +Y I V I P ++ ++ +
Sbjct: 158 ALSKELGEYNIPVFAIGPNYLHSEDS 183
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 87.2 bits (217), Expect = 2e-20
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT- 176
++TG GIG A R G +V+ + +K I S + + D++
Sbjct: 20 IITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISF--VHCDVTKDE 77
Query: 177 --KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
+ ++ + G + I+ NVG LS+ P S+ + E + + +NV L+ K
Sbjct: 78 DVRNLVDTTIAKHG--KLDIMFGNVGVLSTTPYSI-LEAGNEDFKRVMDINVYGAFLVAK 134
Query: 234 LILPRMKDNGRGAIVNVSSIS-----EASPWALFNVYAATK 269
M +G+IV +SIS E Y ATK
Sbjct: 135 HAARVMIPAKKGSIVFTASISSFTAGEGVSHV----YTATK 171
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 86.2 bits (214), Expect = 2e-20
Identities = 21/153 (13%), Positives = 41/153 (26%), Gaps = 13/153 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+V G +G R + I + E+ V K+
Sbjct: 11 LVYGGRGALGSRCVQAFRARNWWVASIDV--------VENEEASASVIVKMTDSFTEQAD 62
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTKLIL 236
V LGD V ++ G + + + D ++ +T+ + L
Sbjct: 63 QVTAEVGKLLGDQKVDAILCVAGGWAGGN--AKSKSLFKNCDLMWKQSIWTSTISSHLAT 120
Query: 237 PRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+K G + + + Y K
Sbjct: 121 KHLK--EGGLLTLAGAKAALDGTPGMIGYGMAK 151
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 86.1 bits (214), Expect = 3e-20
Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 24/158 (15%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
VTG GIG A A G + + + +D++
Sbjct: 11 WVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----------QYPFATEVMDVADAA 59
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+ + + + LVN G L T+ KE W T ++NV F +
Sbjct: 60 QVAQVCQRLLAETE--RLDALVNAAGILRM---GATDQLSKEDWQQTFAVNVGGAF--NL 112
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ + + + GAIV V+S + +P + Y A+K
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASK 150
Score = 27.9 bits (63), Expect = 3.5
Identities = 6/28 (21%), Positives = 10/28 (35%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
S +E G+ ++P T M
Sbjct: 159 SVG---LELAGSGVRCNVVSPGSTDTDM 183
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 86.9 bits (216), Expect = 3e-20
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI------------SRTLEKLKKTAKEIESLHGVQ 165
+TG G GR++A LAR G +I+ I T + L +T +++E+L
Sbjct: 32 FITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-- 89
Query: 166 TKIIAV-----DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD- 219
+IIA D +AA++ QLG + I++ N S + + +TW
Sbjct: 90 -RIIASQVDVRDFDAMQAAVDDGVTQLG--RLDIVLANAALAS--EGTRLNRMDPKTWRD 144
Query: 220 TLSLNVVFTTLMTKLILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
+ +N+ + ++ +P + R G+IV SSI Y A+K
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASK 195
Score = 29.5 bits (67), Expect = 1.2
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A +E I V + P+ V+T M
Sbjct: 204 TMA---LELGPRNIRVNIVCPSSVATPM 228
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti}
PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 85.6 bits (213), Expect = 4e-20
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 32/166 (19%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG GIG+A A LA G +++ E K A I G + + IA D+S
Sbjct: 10 LVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GKKARAIAADISDPG 65
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT-LSLNVVFT 228
KA ++ G + ILVNN + + + W + +N+ T
Sbjct: 66 SVKALFAEIQALTG--GIDILVNNAS--------IVPFVAWDDVDLDHWRKIIDVNLTGT 115
Query: 229 TLMTKLILPRMKDNGR-GAIVNVSSISEASPWALFNV----YAATK 269
++T+ +M+ G+ G +++++S + + Y A K
Sbjct: 116 FIVTRAGTDQMRAAGKAGRVISIASNT----FFAGTPNMAAYVAAK 157
Score = 29.4 bits (67), Expect = 0.99
Identities = 7/28 (25%), Positives = 11/28 (39%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A E KY IT + P + +
Sbjct: 166 ALA---TELGKYNITANAVTPGLIESDG 190
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 86.0 bits (214), Expect = 4e-20
Identities = 34/167 (20%), Positives = 60/167 (35%), Gaps = 38/167 (22%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG GIGRA AR G ++V + R L + + + + D+S
Sbjct: 10 LVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVADVSDPK 65
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT-LSLNV--V 226
+A + G +H + + G + E W+ L +N+
Sbjct: 66 AVEAVFAEALEEFG--RLHGVAHFAG--------VAHSALSWNLPLEAWEKVLRVNLTGS 115
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSSISEASPWALFNV----YAATK 269
F L+ + +++ G +V S++ L YAA K
Sbjct: 116 F--LVARKAGEVLEEGGS--LVLTGSVA-----GLGAFGLAHYAAGK 153
Score = 29.8 bits (68), Expect = 0.89
Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A +E + G+ V + P + T M
Sbjct: 162 TLA---LELARKGVRVNVLLPGLIQTPM 186
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 86.5 bits (215), Expect = 5e-20
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKL--KKTAKEIESLHGVQTKIIAVDLSG 175
+VTG GIGRA A AR G ++ + E+ ++ IE G + ++ DLS
Sbjct: 53 LVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC-GRKAVLLPGDLSD 111
Query: 176 T---KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLM 231
++ + + LG + IL G +D E + T ++NV +
Sbjct: 112 ESFARSLVHKAREALG--GLDILALVAGKQ--TAIPEIKDLTSEQFQQTFAVNVFALFWI 167
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
T+ +P + I+ SSI P YAATK
Sbjct: 168 TQEAIPLLPKGAS--IITTSSIQAYQPSPHLLDYAATK 203
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 85.3 bits (212), Expect = 7e-20
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 24/147 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG + GIGRA A ELARRG ++ + T + + G++ + ++++
Sbjct: 32 IVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA-GLEGRGAVLNVNDAT 90
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNVV 226
A +E+ + G +++LVNN G +T+D + + WD +L V
Sbjct: 91 AVDALVESTLKEFG--ALNVLVNNAG--------ITQDQLAMRMKDDEWDAVIDTNLKAV 140
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSSI 253
F +++ +L M G IVN++S+
Sbjct: 141 F--RLSRAVLRPMMKARGGRIVNITSV 165
Score = 27.5 bits (62), Expect = 5.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E GITV +AP F+ T M
Sbjct: 194 EIGSRGITVNCVAPGFIDTDM 214
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 85.5 bits (212), Expect = 1e-19
Identities = 32/194 (16%), Positives = 55/194 (28%), Gaps = 47/194 (24%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG +GR+ A L G + L R+ + + + + + DLS
Sbjct: 13 LVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 72
Query: 175 ------------------GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKE 216
+ A G +LVNN S YP L + E +
Sbjct: 73 ATAPVSGADGSAPVTLFTRCAELVAACYTHWG--RCDVLVNNASSF--YPTPLLRNDE-D 127
Query: 217 TWDT---------------LSLNVVFTTLMTKLILPRMKD------NGRGAIVNVSSISE 255
+ N + + K R+ +I+N+
Sbjct: 128 GHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT 187
Query: 256 ASPWALFNVYAATK 269
P + +Y K
Sbjct: 188 NQPLLGYTIYTMAK 201
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 84.1 bits (209), Expect = 1e-19
Identities = 31/155 (20%), Positives = 50/155 (32%), Gaps = 21/155 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+VTG + GIG+A L + + V+ + K I DL+ +
Sbjct: 8 LVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----------AENLKFIKADLT-KQ 56
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLMTKL 234
I V + + + + N G L D + E+ L LNV K
Sbjct: 57 QDITNVLDIIKNVSFDGIFLNAGILIK---GSIFDIDIESIKKVLDLNVWSSI--YFIKG 111
Query: 235 ILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ +K +IV S Y +K
Sbjct: 112 LENNLK--VGASIVFNGSDQCFIAKPNSFAYTLSK 144
Score = 29.4 bits (67), Expect = 1.1
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 94
S A ++ KY I V + P V T + + + + E +
Sbjct: 153 SLA---LDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQ 199
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 84.9 bits (211), Expect = 1e-19
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 28/172 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-------------SRTLEKLKKTAKEIESLHGV 164
+TG G GR++A LA G +I+ + E L +TA+ +E
Sbjct: 19 FITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR- 77
Query: 165 QTKIIAV-----DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD 219
K + D + + + Q G + ++V N G L + E WD
Sbjct: 78 --KALTRVLDVRDDAALRELVADGMEQFG--RLDVVVANAGVL---SWGRVWELTDEQWD 130
Query: 220 T-LSLNVVFTTLMTKLILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
T + +N+ T + +P M + G G+IV VSS + Y+A+K
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASK 182
Score = 29.4 bits (67), Expect = 1.2
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A +E +YGI V I P V T M
Sbjct: 191 TLA---IELGEYGIRVNSIHPYSVETPM 215
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 85.6 bits (212), Expect = 1e-19
Identities = 32/194 (16%), Positives = 55/194 (28%), Gaps = 47/194 (24%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG +GR+ A L G + L R+ + + + + + DLS
Sbjct: 50 LVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 109
Query: 175 ------------------GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKE 216
+ A G +LVNN S YP L + E +
Sbjct: 110 ATAPVSGADGSAPVTLFTRCAELVAACYTHWG--RCDVLVNNASSF--YPTPLLRNDE-D 164
Query: 217 TWDT---------------LSLNVVFTTLMTKLILPRMKD------NGRGAIVNVSSISE 255
+ N + + K R+ +I+N+
Sbjct: 165 GHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT 224
Query: 256 ASPWALFNVYAATK 269
P + +Y K
Sbjct: 225 NQPLLGYTIYTMAK 238
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein,
NAD(P)-binding rossmann fold, csgid, oxidoreductase;
1.95A {Francisella tularensis subsp}
Length = 247
Score = 84.1 bits (209), Expect = 2e-19
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 20/145 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG + GIG AH LA +G +V + + +K ++ G + + + +++S
Sbjct: 9 LVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-GFKARGLVLNISDIE 67
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT-LSLNVVFT 228
+ +K + + ILVNN G +T D ++ W + ++ N+
Sbjct: 68 SIQNFFAEIKAENL--AIDILVNNAG--------ITRDNLMMRMSEDEWQSVINTNLSSI 117
Query: 229 TLMTKLILPRMKDNGRGAIVNVSSI 253
M+K + M G I+++ S+
Sbjct: 118 FRMSKECVRGMMKKRWGRIISIGSV 142
Score = 27.8 bits (63), Expect = 3.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E ITV +AP F++T M
Sbjct: 171 EVASRNITVNVVAPGFIATDM 191
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 84.1 bits (209), Expect = 2e-19
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 33/168 (19%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG + G+G+A A +L G NIVL S L TA+E ++ G+ + D+
Sbjct: 9 IVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA-GINVVVAKGDVKNP 67
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNV 225
+ ++ + G + ILVNN G +T DT ++ WD +L
Sbjct: 68 EDVENMVKTAMDAFG--RIDILVNNAG--------ITRDTLMLKMSEKDWDDVLNTNLKS 117
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSISEASPWALFNV----YAATK 269
+ L TK + M G I+N++SI+ + N YAA+K
Sbjct: 118 AY--LCTKAVSKIMLKQKSGKIINITSIA----GIIGNAGQANYAASK 159
Score = 27.8 bits (63), Expect = 3.1
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E+ GI +AP + T M
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDM 192
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 84.2 bits (209), Expect = 2e-19
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 119 VTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKA 178
VTG + G GRA A G ++ +R E L ++ + + + + I++D++ +
Sbjct: 10 VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD----DLVAAYPDRAEAISLDVTDGER 65
Query: 179 AIEAVKNQLGDH-PVHILVNNVGSLSSYPKSLTEDTEKETWDTLSLNVVFTTLMTKLILP 237
+ L + V +LVNN G + + E TE+E D L+V +T+ +LP
Sbjct: 66 IDVVAADVLARYGRVDVLVNNAGR--TQVGAFEETTERELRDLFELHVFGPARLTRALLP 123
Query: 238 RMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+M++ G G++VN+SS +A F+ Y+ATK
Sbjct: 124 QMRERGSGSVVNISSFGGQLSFAGFSAYSATK 155
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 83.7 bits (208), Expect = 2e-19
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG T GIGRA A +LA G +++ + E+ K A+EI + +GV+ + ++L
Sbjct: 11 LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEE 70
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNVV 226
A E + N + + ILVNN G +T D W+ ++L
Sbjct: 71 SINKAFEEIYNLVD--GIDILVNNAG--------ITRDKLFLRMSLLDWEEVLKVNLTGT 120
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSSI 253
F L+T+ L +M G IVN+SS+
Sbjct: 121 F--LVTQNSLRKMIKQRWGRIVNISSV 145
Score = 27.5 bits (62), Expect = 4.1
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E + V +AP F+ T M
Sbjct: 174 ELAPRNVLVNAVAPGFIETDM 194
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 83.5 bits (207), Expect = 2e-19
Identities = 22/153 (14%), Positives = 46/153 (30%), Gaps = 13/153 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+V G +G A + G ++ I + A + G + +
Sbjct: 7 IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ---ADSNILVDGNKN-----WTEQEQ 58
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTKLIL 236
+ +E + L V + G + S + + D + +V + + KL
Sbjct: 59 SILEQTASSLQGSQVDGVFCVAGGWA--GGSASSKDFVKNADLMIKQSVWSSAIAAKLAT 116
Query: 237 PRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+K G + + + P Y K
Sbjct: 117 THLKPGGL--LQLTGAAAAMGPTPSMIGYGMAK 147
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 83.7 bits (208), Expect = 2e-19
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 38/167 (22%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG GIGRA A+ G +V L++ A+ + + + +D++
Sbjct: 9 LITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA------HPVVMDVADPA 62
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNVV 226
+ LG + +V+ G +T D E W+ ++L
Sbjct: 63 SVERGFAEALAHLG--RLDGVVHYAG--------ITRDNFHWKMPLEDWELVLRVNLTGS 112
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSSISEASPWALFNV----YAATK 269
F L+ K M++ G+IV +S L N+ YAA+
Sbjct: 113 F--LVAKAASEAMREKNPGSIVLTASRV-----YLGNLGQANYAASM 152
Score = 29.4 bits (67), Expect = 1.1
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A E ++GI V +AP F+ T+M
Sbjct: 161 TLAL---ELGRWGIRVNTLAPGFIETRM 185
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 85.0 bits (210), Expect = 2e-19
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 30/165 (18%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
VVTG GIG +L+ GI +VL R + K + +++++ + +D++
Sbjct: 16 VVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPI 75
Query: 178 AAIEAVKNQLGDH--PVHILVNNVG----------------------------SLSSYPK 207
A + ++ + + H + ILVNN G +
Sbjct: 76 ATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQ 135
Query: 208 SLTEDTEKETWDTLSLNVVFTTLMTKLILPRMKDNGRGAIVNVSS 252
L +T + + L +N +T++++P ++ + IVNVSS
Sbjct: 136 ELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSS 180
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 83.7 bits (208), Expect = 2e-19
Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 19/143 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG GIG+ + G + I ++ AKE D++
Sbjct: 6 IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-----RPNLFYFHGDVADPL 60
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV--VFTTLM 231
K +E +L + +LVNN L+ +E +D LS+ + + +
Sbjct: 61 TLKKFVEYAMEKLQR--IDVLVNNAC--RGSKGILSSLLYEE-FDYILSVGLKAPY--EL 113
Query: 232 TKLILPRMKDNGRGAIVNVSSIS 254
++L + N +G I+N++S
Sbjct: 114 SRLCRDELIKN-KGRIINIASTR 135
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 83.8 bits (208), Expect = 3e-19
Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 13/159 (8%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+TG GIG A LAR G ++ I R + ++ + G +T +A L
Sbjct: 5 AITGSASGIGAALKELLARAGHTVIGIDRGQADI---EADLSTPGGRET-AVAAVLDRCG 60
Query: 178 AAIEAVKNQLGDHPV------HILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTL 230
++ + G + VN G +S+ L E + + + + T
Sbjct: 61 GVLDGLVCCAGVGVTAANSGLVVAVNYFG-VSALLDGLAEALSRGQQPAAVIVGSIAATQ 119
Query: 231 MTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
LP ++ G ++ YA +K
Sbjct: 120 PGAAELPMVEAMLAGDEARAIELA-EQQGQTHLAYAGSK 157
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 84.6 bits (210), Expect = 3e-19
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI------------SRTLEKLKKTAKEIESLHGVQ 165
+TG G GR +A LA+ G +IV I + E+LK+T + +E G +
Sbjct: 50 FITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-GRR 108
Query: 166 TKIIAVDLS---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-L 221
D+ +A ++ + G + ILV+NVG + + T+ + W L
Sbjct: 109 IIARQADVRDLASLQAVVDEALAEFG--HIDILVSNVGISN--QGEVVSLTD-QQWSDIL 163
Query: 222 SLNVVFTTLMTKLILPRMKDNGR-GAIVNVSSISEASPWALFNVYAATK 269
N++ + +LP M + G+ G+++ VSS + YAA+K
Sbjct: 164 QTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASK 212
Score = 29.9 bits (68), Expect = 0.71
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM--NNFSYRVRNKSFFVPDAEQYARSA 96
S A E ++ I V + P V+T+M N ++ P E A
Sbjct: 221 SLA---NEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELF 271
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 83.0 bits (206), Expect = 5e-19
Identities = 40/174 (22%), Positives = 68/174 (39%), Gaps = 37/174 (21%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESL------HGVQTKIIAV 171
+VTG GIGRA + LA G + ++T + +
Sbjct: 11 LVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQA 70
Query: 172 DLS---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT--- 220
D+S + +E V+ P ++V+ G +T+D ++ WD
Sbjct: 71 DVSEARAARCLLEQVQACFS-RPPSVVVSCAG--------ITQDEFLLHMSEDDWDKVIA 121
Query: 221 LSLNVVFTTLMTKLILPRM-KDNGRGAIVNVSSISEASPWALFNV----YAATK 269
++L F L+T+ + + RG+I+N+SSI NV YAA+K
Sbjct: 122 VNLKGTF--LVTQAAAQALVSNGCRGSIINISSIVGKVG----NVGQTNYAASK 169
Score = 28.3 bits (64), Expect = 2.4
Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM 72
+ A E ++GI + P F++T M
Sbjct: 178 TAAR---ELGRHGIRCNSVLPGFIATPM 202
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 83.0 bits (206), Expect = 6e-19
Identities = 26/149 (17%), Positives = 59/149 (39%), Gaps = 23/149 (15%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
++T T G+G+ +L +G ++ + ++ + + + + + + D++
Sbjct: 11 LITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKK 69
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNV 225
+E + G + L+NN G + E E++ W+ +L
Sbjct: 70 EDLHKIVEEAMSHFG--KIDFLINNAGP------YVFERKKLVDYEEDEWNEMIQGNLTA 121
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSIS 254
VF + KL++P M+ G I+N
Sbjct: 122 VF--HLLKLVVPVMRKQNFGRIINYGFQG 148
Score = 29.1 bits (66), Expect = 1.3
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E +YGIT + P + +M
Sbjct: 178 EEAEYGITANMVCPGDIIGEM 198
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 82.6 bits (205), Expect = 6e-19
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 25/148 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
VTG GIG + L + G +V + K ++ ++L G ++
Sbjct: 17 YVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-GFDFYASEGNVGDW 75
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNV 225
TK A + VK ++G + +LVNN G +T D +E W +L
Sbjct: 76 DSTKQAFDKVKAEVG--EIDVLVNNAG--------ITRDVVFRKMTREDWQAVIDTNLTS 125
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSI 253
+F +TK ++ M + G G I+N+SS+
Sbjct: 126 LF--NVTKQVIDGMVERGWGRIINISSV 151
Score = 28.6 bits (65), Expect = 1.8
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E G+TV ++P ++ T M
Sbjct: 180 EVATKGVTVNTVSPGYIGTDM 200
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 82.6 bits (205), Expect = 1e-18
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 22/168 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISR------------TLEKLKKTAKEIESLHGVQ 165
++TG G+GR++A LA G +I + R T + L +T +E G +
Sbjct: 14 LITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-GRR 72
Query: 166 TKIIAVDLS---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-L 221
VD+ ++ + ++ LG + I + N G +L + E WD +
Sbjct: 73 CISAKVDVKDRAALESFVAEAEDTLG--GIDIAITNAGIS---TIALLPEVESAQWDEVI 127
Query: 222 SLNVVFTTLMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
N+ T + P M G IV VSS+ S Y ++K
Sbjct: 128 GTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSK 175
Score = 28.6 bits (65), Expect = 1.8
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARS 95
A + YGITV +AP + T M + + PD E+
Sbjct: 184 CAAH---DLVGYGITVNAVAPGNIETPMTHNDFVFG---TMRPDLEKPTLK 228
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Length = 246
Score = 81.8 bits (203), Expect = 1e-18
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 25/149 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL-ISRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG + GIGRA A +LA++G N+V+ + +K + EI+ L G + D++
Sbjct: 8 LVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-GSDAIAVRADVANA 66
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNV 225
++ + G V ILVNN G +T+D ++E WDT +L
Sbjct: 67 EDVTNMVKQTVDVFG--QVDILVNNAG--------VTKDNLLMRMKEEEWDTVINTNLKG 116
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSIS 254
VF L TK + M G IVN++S+
Sbjct: 117 VF--LCTKAVSRFMMRQRHGRIVNIASVV 143
Score = 27.8 bits (63), Expect = 3.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E ITV IAP F++T M
Sbjct: 171 ELASRNITVNAIAPGFIATDM 191
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 82.2 bits (204), Expect = 1e-18
Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 25/148 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
VTG G+G A + L G+ + + S + + G K AVD++
Sbjct: 29 FVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-GRDFKAYAVDVADF 87
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNV 225
+ E V G V +L+NN G +T D K WD L+
Sbjct: 88 ESCERCAEKVLADFG--KVDVLINNAG--------ITRDATFMKMTKGDWDAVMRTDLDA 137
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSI 253
+F +TK + M + G IVN+ S+
Sbjct: 138 MF--NVTKQFIAGMVERRFGRIVNIGSV 163
Score = 28.7 bits (65), Expect = 1.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E K GITV ++P +++T M
Sbjct: 192 ETAKRGITVNTVSPGYLATAM 212
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 81.8 bits (203), Expect = 1e-18
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 25/148 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL-ISRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG + GIGR+ A +LA G N+ + + + EK + +EI++ GV + I +++
Sbjct: 8 LVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQANVADA 66
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNV 225
KA I+ V +Q G + +LVNN G +T D +++ WD +L
Sbjct: 67 DEVKAMIKEVVSQFG--SLDVLVNNAG--------ITRDNLLMRMKEQEWDDVIDTNLKG 116
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSI 253
VF + P+M GAI+N+SS+
Sbjct: 117 VF--NCIQKATPQMLRQRSGAIINLSSV 142
Score = 27.8 bits (63), Expect = 3.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E GITV +AP F+ + M
Sbjct: 171 ELASRGITVNAVAPGFIVSDM 191
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann
fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus}
SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 81.8 bits (203), Expect = 1e-18
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 25/149 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL-ISRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
VVTG + GIG+A A L + G +++ +R+ + ++ +K+IE+ G Q D+S
Sbjct: 5 VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GGQAITFGGDVSKE 63
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNV 225
+A ++ + G + ++VNN G +T DT +K WD L+L
Sbjct: 64 ADVEAMMKTAIDAWG--TIDVVVNNAG--------ITRDTLLIRMKKSQWDEVIDLNLTG 113
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSIS 254
VF L T+ M +G I+N++S+
Sbjct: 114 VF--LCTQAATKIMMKKRKGRIINIASVV 140
Score = 27.4 bits (62), Expect = 4.6
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E I V + P F+++ M
Sbjct: 168 EGASRNINVNVVCPGFIASDM 188
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural genomics,
secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 81.4 bits (202), Expect = 2e-18
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 24/148 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL-ISRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
++TG + GIGRA A LA G + + + EK ++ A+E ++ +L
Sbjct: 5 LITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEA 64
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNV 225
A + LG + LVNN G +T DT + E W+ +L+
Sbjct: 65 EAATALVHQAAEVLG--GLDTLVNNAG--------ITRDTLLVRMKDEDWEAVLEANLSA 114
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSI 253
VF T+ + M G IVN++S+
Sbjct: 115 VF--RTTREAVKLMMKARFGRIVNITSV 140
Score = 27.4 bits (62), Expect = 4.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
EY + GITV +AP F+ T+M
Sbjct: 169 EYAQRGITVNAVAPGFIETEM 189
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 81.5 bits (202), Expect = 2e-18
Identities = 34/159 (21%), Positives = 57/159 (35%), Gaps = 23/159 (14%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
V+TG + GIG R +V SR+++ +A D+S
Sbjct: 32 VITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----------DPDIHTVAGDISKPE 81
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV--VFTTLM 231
+ + G + LVNN G + + +E +D L +NV F +
Sbjct: 82 TADRIVREGIERFG--RIDSLVNNAG---VFLAKPFVEMTQEDYDHNLGVNVAGFF--HI 134
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATKT 270
T+ M G G IV++++ P A+ T
Sbjct: 135 TQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLT 173
Score = 30.6 bits (70), Expect = 0.42
Identities = 8/29 (27%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKMN 73
S A +E+ + G+ V ++P + T M+
Sbjct: 183 SLA---MEFSRSGVRVNAVSPGVIKTPMH 208
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 81.1 bits (201), Expect = 3e-18
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 25/149 (16%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL-ISRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
+VTG + GIGRA A ELA G + + + + + I + G + + D+S
Sbjct: 32 LVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-GGEAFAVKADVSQE 90
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNV 225
+A AV + G + +LVNN G +T DT +++ W + L+L
Sbjct: 91 SEVEALFAAVIERWG--RLDVLVNNAG--------ITRDTLLLRMKRDDWQSVLDLNLGG 140
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSIS 254
VF L ++ M G I+N++S+
Sbjct: 141 VF--LCSRAAAKIMLKQRSGRIINIASVV 167
Score = 27.9 bits (63), Expect = 3.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E GITV +AP F++T M
Sbjct: 195 ELASRGITVNAVAPGFIATDM 215
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 81.1 bits (201), Expect = 3e-18
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 35/175 (20%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI------------SRTLEKLKKTAKEIESLHGVQ 165
+TG G GRA+A LA G +I+ + T E+L T K +E +
Sbjct: 17 FITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-- 74
Query: 166 TKIIAV-----DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT 220
+I+A D AA++A ++LG + I+V N G + + W
Sbjct: 75 -RIVARQADVRDRESLSAALQAGLDELG--RLDIVVANAGIAP------MSAGD-DGWHD 124
Query: 221 -LSLNVVFTTLMTKLILPRMKDNGR-GAIVNVSSISEASPWALFNV----YAATK 269
+ +N+ K+ +P + G G+IV +SS + + + Y A K
Sbjct: 125 VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAK 179
Score = 29.5 bits (67), Expect = 1.1
Identities = 9/50 (18%), Positives = 14/50 (28%), Gaps = 3/50 (6%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 94
+A I V I P+ V T M N + + +
Sbjct: 188 VYA---NLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGA 234
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 80.6 bits (200), Expect = 3e-18
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 27/147 (18%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG + GIG+A A LA RG ++ + + + + + G K +A++++
Sbjct: 13 LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL----GDNGKGMALNVTNPE 68
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT---LSLNVV 226
+A ++A+ ++ G V ILVNN G +T D ++E W +L +
Sbjct: 69 SIEAVLKAITDEFG--GVDILVNNAG--------ITRDNLLMRMKEEEWSDIMETNLTSI 118
Query: 227 FTTLMTKLILPRMKDNGRGAIVNVSSI 253
F ++K +L M +G I+NV S+
Sbjct: 119 F--RLSKAVLRGMMKKRQGRIINVGSV 143
Score = 27.5 bits (62), Expect = 4.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E G+TV +AP F+ T M
Sbjct: 172 EVASRGVTVNTVAPGFIETDM 192
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 80.8 bits (200), Expect = 4e-18
Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 20/168 (11%)
Query: 115 QSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS 174
S +V+G G+G A L G+ +V+ EK K A E+ G + + ++ +++
Sbjct: 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GNRAEFVSTNVT 86
Query: 175 ---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEK---ETWD-TLSLNVVF 227
AAIEA + +V + G + + D + T+ L +
Sbjct: 87 SEDSVLAAIEAANQLGR--LRYAVVAHGG-FGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143
Query: 228 TTLMTKLILPRMKDN------GRGAIVNVSSISEASPWALFNVYAATK 269
T + +L+ + RGA+V +SI+ YAA K
Sbjct: 144 TYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAK 191
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 80.3 bits (199), Expect = 4e-18
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 17/151 (11%)
Query: 115 QSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS 174
+ F+VTG + G+G A LA+ G ++ + ++ A E+ G + D++
Sbjct: 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GAAVRFRNADVT 63
Query: 175 ---GTKAAIEAVKNQLGDHPVHILVNNVG-SLSSYPKSLTEDTEKETWD-TLSLNVVFTT 229
AA+ K + G VH LVN G + + +++ T+++N++ T
Sbjct: 64 NEADATAALAFAKQEFG--HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTF 121
Query: 230 LMTKLILPRMKDN------GRGAIVNVSSIS 254
M +L M RG IVN +SI+
Sbjct: 122 NMIRLAAEVMSQGEPDADGERGVIVNTASIA 152
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 80.4 bits (199), Expect = 5e-18
Identities = 33/153 (21%), Positives = 62/153 (40%), Gaps = 19/153 (12%)
Query: 115 QSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS 174
V+TG G+G A A L +G + VL+ + AK++ G D++
Sbjct: 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVT 68
Query: 175 ---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEK---ETWD-TLSLNVVF 227
+ A+ K + G V + VN G + + + E + L +N++
Sbjct: 69 SEKDVQTALALAKGKFG--RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126
Query: 228 TTLMTKLILPRM------KDNGRGAIVNVSSIS 254
T + +L+ M + RG I+N +S++
Sbjct: 127 TFNVIRLVAGEMGQNEPDQGGQRGVIINTASVA 159
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 80.3 bits (199), Expect = 6e-18
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
+VTG T GIG A A +G + L +KLK+ A ++ G + + +LS
Sbjct: 31 LVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----GKDVFVFSANLSDRK 86
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT-LSLNVVFT 228
K E + ++ + ILVNN G +T D + + WD L++N+
Sbjct: 87 SIKQLAEVAEREME--GIDILVNNAG--------ITRDGLFVRMQDQDWDDVLAVNLTAA 136
Query: 229 TLMTKLILPRMKDNGRGAIVNVSSI 253
+ +T+ ++ M G I+N++SI
Sbjct: 137 STLTRELIHSMMRRRYGRIINITSI 161
Score = 28.3 bits (64), Expect = 2.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E ITV IAP F+ + M
Sbjct: 190 EIASRNITVNCIAPGFIKSAM 210
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 80.7 bits (200), Expect = 6e-18
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI-SRTLEKLKKTAKEIESLHGVQTKIIAVDLS-- 174
++TG GIGRA + A+ G NI + +T + +E GV+ ++ DLS
Sbjct: 51 LITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDLSDE 109
Query: 175 -GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMT 232
K ++ QLG ++ILVNNV YP+ E E + T +N+ +T
Sbjct: 110 QHCKDIVQETVRQLGS--LNILVNNVAQQ--YPQQGLEYITAEQLEKTFRINIFSYFHVT 165
Query: 233 KLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
K L +K I+N +SI Y+ATK
Sbjct: 166 KAALSHLKQGDV--IINTASIVAYEGNETLIDYSATK 200
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 78.3 bits (194), Expect = 2e-17
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 21/142 (14%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
++TG + GIG A A L + G +++ EKLK + I +L+ K
Sbjct: 18 LITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL----KDNYTIEVCNLA-NK 72
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT-LSLNVVFTTLM 231
+ ++ + ILV N G +T DT + + +D + +N+ ++
Sbjct: 73 EECSNLISKTS--NLDILVCNAG--------ITSDTLAIRMKDQDFDKVIDINLKANFIL 122
Query: 232 TKLILPRMKDNGRGAIVNVSSI 253
+ + +M G I+N+SSI
Sbjct: 123 NREAIKKMIQKRYGRIINISSI 144
Score = 28.2 bits (64), Expect = 2.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E GITV +AP F+ + M
Sbjct: 173 EVATRGITVNAVAPGFIKSDM 193
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 79.4 bits (196), Expect = 2e-17
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 18/162 (11%)
Query: 118 VVTGCTDGIGRAYAHELAR---RGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS 174
++TGC+ GIG A LA + + R L+ + + +L + + L
Sbjct: 6 LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLD 65
Query: 175 GTK-AAIEAVKNQLGDHPVHILVNN--VGSLSSYPKSLTEDTEKETW----DTLSLNVVF 227
++ A + ++ + V +LV N +G L E ++ D NVV
Sbjct: 66 VRDSKSVAAARERVTEGRVDVLVCNAGLGLLGP-----LEALGEDAVASVLDV---NVVG 117
Query: 228 TTLMTKLILPRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
T M + LP MK G G ++ S+ +VY A+K
Sbjct: 118 TVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASK 159
Score = 28.5 bits (64), Expect = 2.3
Identities = 8/47 (17%), Positives = 14/47 (29%)
Query: 48 ALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYAR 94
+L V +G+ + I V T + D + R
Sbjct: 168 SLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHR 214
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 78.1 bits (193), Expect = 3e-17
Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 32/181 (17%)
Query: 115 QSFVVTGCTDGIGRAYAHELARRGINIVLI--SRTLEKLKKTAKEIESLHGVQTKIIAVD 172
S VVTG GIG +L + +I +R +EK A E++S+ + ++ +
Sbjct: 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK----ATELKSIKDSRVHVLPLT 59
Query: 173 LS---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTE--KETWDTLSLNVVF 227
++ + V +G + +L+NN G L SY + + E D N
Sbjct: 60 VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV---NTTS 116
Query: 228 TTLMTKLILPRMK-----------DNGRGAIVNVSSI-------SEASPWALFNVYAATK 269
L+T+ +LP +K R A++ +SS + S Y +K
Sbjct: 117 VVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSK 176
Query: 270 T 270
Sbjct: 177 A 177
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 75.8 bits (187), Expect = 9e-17
Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 28/153 (18%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
++ G + +G A L ++ ++ R + VD++
Sbjct: 7 LLIGASGTLGSAVKERLEKKA-EVITAGRHSGD------------------VTVDIT-NI 46
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTKLIL 236
+I+ + Q+G V +V+ GS + LTE T E T+S + + L +
Sbjct: 47 DSIKKMYEQVG--KVDAIVSATGSAT--FSPLTELTP-EKNAVTISSKLGGQINLVLLGI 101
Query: 237 PRMKDNGRGAIVNVSSISEASPWALFNVYAATK 269
+ D G + I P A
Sbjct: 102 DSLNDKGS--FTLTTGIMMEDPIVQGASAAMAN 132
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 75.7 bits (187), Expect = 3e-16
Identities = 30/181 (16%), Positives = 55/181 (30%), Gaps = 41/181 (22%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLI------------SRTLEKLKKTAKEIESLHGVQ 165
+VTG G GR++A +LA G +I+L T L++ E+E
Sbjct: 14 LVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-- 71
Query: 166 TKIIAV-----DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD- 219
K D + + + G + ++V N G L + +
Sbjct: 72 -KAYTAEVDVRDRAAVSRELANAVAEFG--KLDVVVANAGIC-----PLGAHLPVQAFAD 123
Query: 220 TLSLNVVFTTLMTKLILPRMKDNGRGAIVNVSSIS-----------EASPWALFNVYAAT 268
++ V LP + +I+ S++ Y+
Sbjct: 124 AFDVDFVGVINTVHAALPYLTS--GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYA 181
Query: 269 K 269
K
Sbjct: 182 K 182
Score = 29.5 bits (67), Expect = 0.99
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 5/56 (8%)
Query: 45 SWAALRVEYQKYGITVQHIAPAFVSTKM--NNFSYRVRNKSFFVPDAEQYARSAVS 98
A + I I P V+T M + YR P + +
Sbjct: 191 QLA---AQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPA 243
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 74.8 bits (184), Expect = 8e-16
Identities = 34/159 (21%), Positives = 66/159 (41%), Gaps = 10/159 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLK----KTAKEIESLHGVQTKIIAVDL 173
++TG + G GR A LA G + R + + + V + + +D+
Sbjct: 9 LITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDV 68
Query: 174 SGTKAAIEAVKNQLGDH-PVHILVNNVG-SLSSYPKSLTEDTEKETWDTLSLNVVFTTLM 231
+ A+ +G+ + +L++N G + ++ T + E +D NV+ T +
Sbjct: 69 QSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDI---NVLSTQRV 125
Query: 232 TKLILPRMKDNGRGAIVNVSSISEASPWALFN-VYAATK 269
+ LP M+ G ++ +SS S A + Y A K
Sbjct: 126 NRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAK 164
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 73.5 bits (181), Expect = 1e-15
Identities = 33/141 (23%), Positives = 48/141 (34%), Gaps = 33/141 (23%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
V++GC GIG A L G IV I ++ DLS
Sbjct: 5 VISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------------------IADLSTAE 46
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNVVFTTLMTK 233
G K AI V + + LV G + +S+N T +
Sbjct: 47 GRKQAIADVLAKCSKG-MDGLVLCAGLGPQ----------TKVLGNVVSVNYFGATELMD 95
Query: 234 LILPRMKDNGRGAIVNVSSIS 254
LP +K + A V +SS++
Sbjct: 96 AFLPALKKGHQPAAVVISSVA 116
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 73.1 bits (180), Expect = 7e-15
Identities = 54/260 (20%), Positives = 92/260 (35%), Gaps = 44/260 (16%)
Query: 20 VLWKLVNGFRVHVIGQYVDLKQKYGSWAALRV----------EYQKYGITVQHIA-PAFV 68
+L L RV V+G + R E ++ G TV + A
Sbjct: 109 LLRNLAPCARVVVVGTTPAEAGSVHAQVVQRALEGFTRSLGKELRR-GATVSLVYLSADA 167
Query: 69 STKMNNFSYRVRNKSFFVPDAEQYARSAVSTLGVTD-TSTGFWVHGIQSFV--VTGCTDG 125
+R F + Y V +G D T W + V VTG G
Sbjct: 168 KPGATGLESTMR---FILSAKSAYVDGQVFRVGAADSTPPADWDKPLDGKVAVVTGAARG 224
Query: 126 IGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS---GTKAAIEA 182
IG A AR G +V I + + + + G + +D++
Sbjct: 225 IGATIAEVFARDGATVVAID-VDGAAEDLKRVADKVGG---TALTLDVTADDAVDKITAH 280
Query: 183 VKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT-LSLNVVFTTLMTKLIL 236
V G V ILVNN G +T D +++ WD +++N++ +T+ ++
Sbjct: 281 VTEHHGG-KVDILVNNAG--------ITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLV 331
Query: 237 PRM--KDNGRGAIVNVSSIS 254
+ GR ++ +SS++
Sbjct: 332 GNGTIGEGGR--VIGLSSMA 349
Score = 26.9 bits (60), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
GIT+ +AP F+ TKM
Sbjct: 377 VLADKGITINAVAPGFIETKM 397
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 70.9 bits (174), Expect = 1e-14
Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 31/179 (17%)
Query: 116 SFVVTGCTDGIGRAYAHELA---RRGINIVLISRTLEK---LKKTAKEIESLHGVQTKII 169
S ++TGC G+G L + ++ R E+ L+ AK ++H I+
Sbjct: 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIH-----IL 77
Query: 170 AVDLS---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDTLSLNVV 226
+DL + ++ D +++L NN G +T +E DTL N V
Sbjct: 78 EIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTV 136
Query: 227 FTTLMTKLILPRMK-----------DNGRGAIVNVS----SISEASPWALFNVYAATKT 270
++ K LP +K GR AI+N+S SI + ++ Y +K+
Sbjct: 137 VPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMY-AYRTSKS 194
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 68.8 bits (169), Expect = 9e-14
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 46/176 (26%)
Query: 117 FVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT 176
V+TG G+G A ELARRG +++ R K + A+ + Q ++ +DL
Sbjct: 19 VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG----QVEVRELDLQDL 74
Query: 177 K---AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDTLSLNVVFTT---- 229
+ V +L+NN G + + P +LT D T
Sbjct: 75 SSVRRFADGVS------GADVLINNAG-IMAVPYALTVD---------GFESQIGTNHLG 118
Query: 230 --LMTKLILPRMKDNGRGAIVNVSSI-------------SEASPWALFNVYAATKT 270
+T L+LPR+ R +V VSS+ + ++ + Y+ +K
Sbjct: 119 HFALTNLLLPRLT--DR--VVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKL 170
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 68.9 bits (169), Expect = 9e-14
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL---------ISRTLEKLKKTAKEIESLHGVQTKI 168
+VTG G+GRAYA A RG +V+ + + K +EI G K
Sbjct: 13 LVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KA 69
Query: 169 IAV--DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV 225
+A + + ++ + G + ++VNN G L +S + ++++ WD +++
Sbjct: 70 VANYDSVEAGEKLVKTALDTFGR--IDVVVNNAGILR--DRSFSRISDED-WDIIQRVHL 124
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSIS 254
+ +T+ MK G I+ +S S
Sbjct: 125 RGSFQVTRAAWDHMKKQNYGRIIMTASAS 153
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 66.9 bits (164), Expect = 3e-13
Identities = 31/154 (20%), Positives = 64/154 (41%), Gaps = 25/154 (16%)
Query: 115 QSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS 174
VVTG G+G A L G +V++ E + ++ G + + A D++
Sbjct: 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL----GDRARFAAADVT 62
Query: 175 ---GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTE--KETWD-TLSLNVVFT 228
+A++ + +G + I+VN G + + L+ D + + +N+V +
Sbjct: 63 DEAAVASALDLAE-TMG--TLRIVVNCAG-TGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118
Query: 229 TLMTKLILPRMKDN--------GRGAIVNVSSIS 254
+ +L R+ RG I+N +S++
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTASVA 152
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 68.2 bits (167), Expect = 3e-13
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL---------ISRTLEKLKKTAKEIESLHGVQTKI 168
++TG G+G+ Y+ E A+ G +V+ + EI G
Sbjct: 12 IITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG---VA 68
Query: 169 IAV--DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNV 225
+A ++ +E G VH+++NN G L S+ + TEK+ + + +++
Sbjct: 69 VADYNNVLDGDKIVETAVKNFGT--VHVIINNAGILR--DASMKKMTEKD-YKLVIDVHL 123
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSIS 254
+TK P + G IVN SS +
Sbjct: 124 NGAFAVTKAAWPYFQKQKYGRIVNTSSPA 152
Score = 65.1 bits (159), Expect = 3e-12
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS--- 174
++TG G+G+ YA A+ G +V+ + KT EI++ G +
Sbjct: 326 LITGAGAGLGKEYAKWFAKYGAKVVVND--FKDATKTVDEIKAAGG---EAWPDQHDVAK 380
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-LSLNVVFTTLMTK 233
++A I+ V ++ G + ILVNN G L +S + +++E WD+ ++++ T +++
Sbjct: 381 DSEAIIKNVIDKYGT--IDILVNNAGILR--DRSFAKMSKQE-WDSVQQVHLIGTFNLSR 435
Query: 234 LILPRMKDNGRGAIVNVSSIS 254
L P + G I+N++S S
Sbjct: 436 LAWPYFVEKQFGRIINITSTS 456
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 67.9 bits (166), Expect = 4e-13
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 20/149 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVL---------ISRTLEKLKKTAKEIESLHGVQTKI 168
VVTG G+GR YA A RG +V+ + EI G +
Sbjct: 23 VVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG---EA 79
Query: 169 IAV--DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWD-TLSLNV 225
+A + IE G V ILVNN G L +SL + +E++ W+ +++
Sbjct: 80 VADYNSVIDGAKVIETAIKAFGR--VDILVNNAGILR--DRSLVKTSEQD-WNLVNDVHL 134
Query: 226 VFTTLMTKLILPRMKDNGRGAIVNVSSIS 254
+ T+ P MK G I+ SS S
Sbjct: 135 KGSFKCTQAAFPYMKKQNYGRIIMTSSNS 163
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 66.0 bits (162), Expect = 6e-13
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+VTG GIG A A LA G + + R + + L GV+ + D
Sbjct: 19 LVTGGNRGIGLAIAQRLAADGHKVAVTHR-------GSGAPKGLFGVEVDV--TDSDAVD 69
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT-LSLNVVFTTLM 231
A AV+ G PV +LV+N G L+ D +E ++ ++ N+ +
Sbjct: 70 RAFTAVEEHQG--PVEVLVSNAG--------LSADAFLMRMTEEKFEKVINANLTGAFRV 119
Query: 232 TKLILPRMKDNGRGAIVNVSSIS 254
+ M+ N G ++ + S+S
Sbjct: 120 AQRASRSMQRNKFGRMIFIGSVS 142
Score = 27.5 bits (62), Expect = 4.5
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E K +T +AP ++ T M
Sbjct: 170 ELSKANVTANVVAPGYIDTDM 190
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase;
1.99A {Streptomyces coelicolor}
Length = 253
Score = 66.0 bits (162), Expect = 6e-13
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 25/143 (17%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+VTG GIG A A A G + + R+ E E V+ I D +
Sbjct: 25 LVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------EGFLAVKCDI--TDTEQVE 75
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDT-----EKETWDT-LSLNVVFTTLM 231
A + ++ G PV +L+ N G +T+D +E + + + N+ T +
Sbjct: 76 QAYKEIEETHG--PVEVLIANAG--------VTKDQLLMRMSEEDFTSVVETNLTGTFRV 125
Query: 232 TKLILPRMKDNGRGAIVNVSSIS 254
K M +G +V +SS+
Sbjct: 126 VKRANRAMLRAKKGRVVLISSVV 148
Score = 26.7 bits (60), Expect = 6.8
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 52 EYQKYGITVQHIAPAFVSTKM 72
E IT +AP FV T M
Sbjct: 176 ELGSRNITFNVVAPGFVDTDM 196
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 64.2 bits (157), Expect = 2e-12
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 23/149 (15%)
Query: 115 QSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLS 174
+S +VTG G+GRA A L RG +V++ E G + D++
Sbjct: 3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------GEDLIYVEGDVT 49
Query: 175 GTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTED--TEKETWD-TLSLNVVFTTLM 231
+ AV + P+ +V+ G + K L ++ E++ L +N++ T +
Sbjct: 50 REEDVRRAVARAQEEAPLFAVVSAAG-VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108
Query: 232 TKLILPRM------KDNGRGAIVNVSSIS 254
+L M + RG IVN +S++
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTASVA 137
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 60.5 bits (147), Expect = 8e-11
Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 30/159 (18%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIV----------LISRTLEKLKKTAKEIESLHGVQTK 167
+VTG GIGRA+A A G +V + + EI + G +
Sbjct: 31 IVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG---E 87
Query: 168 IIAV-----DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDT-L 221
+A D I+ G + +LVNN G + + + +E+E +D +
Sbjct: 88 AVADGSNVADWDQAAGLIQTAVETFGG--LDVLVNNAGIVR--DRMIANTSEEE-FDAVI 142
Query: 222 SLNVVFTTLMTKLILPRMKDNGR------GAIVNVSSIS 254
++++ + + + G I+N SS +
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA 181
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted
open sheet structure, oxidoreductase; 1.90A
{Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4
PDB: 1lua_A*
Length = 287
Score = 56.8 bits (137), Expect = 1e-09
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 8/83 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
VV T +G A LA G +VL R L+K + A + V + A + +
Sbjct: 123 VVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKV--NVTAAETADDA 180
Query: 178 AAIEAVKNQLGDHPVHILVNNVG 200
+ EAVK H +
Sbjct: 181 SRAEAVKG------AHFVFTAGA 197
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme,
megasynthase, fatty acid synthesis; 3.2A {Sus scrofa}
PDB: 2vz9_A*
Length = 2512
Score = 48.7 bits (116), Expect = 1e-06
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 3/120 (2%)
Query: 86 VPDAEQYARSAVSTLGVTDTSTGFWVHGIQSFVVTGCTDGIGRAYAHELARRGI-NIVLI 144
V + EQ + + +S+V+TG G G A L RG +VL
Sbjct: 1856 VREEEQGPAPRGLPPIALTGLSKTFCPPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLT 1915
Query: 145 SRTLEKLKKTAKEIESL--HGVQTKIIAVDLSGTKAAIEAVKNQLGDHPVHILVNNVGSL 202
SR+ + A+++ GVQ + + S A + PV + N L
Sbjct: 1916 SRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGGVFNLAMVL 1975
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH,
oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora
spinosa}
Length = 795
Score = 43.6 bits (103), Expect = 5e-05
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 116 SFVVTGCTDGIGRAYAHELA-RRGI-NIVLISR---TLEKLKKTAKEIESLHGVQTKIIA 170
+ +VTG T +G A L RG+ N+VL+SR + ++ + G + + A
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY-GAEVSLQA 590
Query: 171 VDLSGTKAAIEAVKNQLGDHPV 192
D++ + + + + +HP+
Sbjct: 591 CDVADRETLAKVLASIPDEHPL 612
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 39.6 bits (92), Expect = 8e-04
Identities = 49/293 (16%), Positives = 85/293 (29%), Gaps = 99/293 (33%)
Query: 14 AVTVLHVLWKLVNGFRVHVIGQYVDLKQKYGSWAALRVEYQKYGITVQHIAPAFVSTKMN 73
+ VL+ + G R + + Y + +L + + P + M
Sbjct: 296 VRKAITVLFFI--GVRCY---------EAYPN-TSLPPSILEDSLENNEGVP----SPM- 338
Query: 74 NFSYRVRNKSFFVPDAEQYARSAVSTLGVTDTSTGFWVH-----GIQSFVVTGCTDGIGR 128
S + N + + Y S L G V G ++ VV+G
Sbjct: 339 -LS--ISNLTQ--EQVQDYVNKTNSHL-----PAGKQVEISLVNGAKNLVVSG------- 381
Query: 129 AYAHELARRGINIVLISRTLEKLKKTAKEIES--------------------------LH 162
L G+N TL K K + +S L
Sbjct: 382 -PPQSL--YGLN-----LTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLV 433
Query: 163 GVQTKIIAVDLSGTKAAIEAVKNQLGDHPVHILVNNVGS-LSSYPKSLTED------TEK 215
I DL + A + PV+ + GS L S++E
Sbjct: 434 PASDLINK-DLVKNNVSFNA--KDIQ-IPVYDTFD--GSDLRVLSGSISERIVDCIIRLP 487
Query: 216 ETWDTLSLN-----VVF----TTLMTKLILPRMKDNGRGA-IVNVSSISEASP 258
W+T + + F + + L R KD G G ++ ++ + +P
Sbjct: 488 VKWETTTQFKATHILDFGPGGASGLGVLTH-RNKD-GTGVRVIVAGTL-DINP 537
Score = 38.5 bits (89), Expect = 0.002
Identities = 35/177 (19%), Positives = 60/177 (33%), Gaps = 42/177 (23%)
Query: 65 PAFVSTKMNNFSYRVRNKSFFVPDA--------EQYARSA-VSTLGVTDTSTGFW-VH-- 112
PA + F +++K DA E Y +A S V + V
Sbjct: 1734 PALTLMEKAAFE-DLKSKGLIPADATFAGHSLGE-Y--AALASLADVMSIESLVEVVFYR 1789
Query: 113 G--IQSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHG--VQTKI 168
G +Q V D +GR+ +A + S + E L+ + + G V+
Sbjct: 1790 GMTMQVAVPR---DELGRSNYGMIAINPGRVAA-SFSQEALQYVVERVGKRTGWLVE--- 1842
Query: 169 IA---------VDLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKE 216
I V +G A++ V N L I + + + KSL+ + +
Sbjct: 1843 IVNYNVENQQYV-AAGDLRALDTVTNVLN----FIKLQKI-DIIELQKSLSLEEVEG 1893
Score = 32.7 bits (74), Expect = 0.14
Identities = 29/165 (17%), Positives = 50/165 (30%), Gaps = 43/165 (26%)
Query: 128 RAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAVKNQL 187
RA H G +I+ I + + G K + ++
Sbjct: 1648 RADNHFKDTYGFSILDIVIN-----------------NPVNLTIHFGGEKG--KRIRENY 1688
Query: 188 GDHPVHILVNNVGSLSSYPKSLTEDTEKETW----DTLSLNVVFT----TLMTKLILPRM 239
+V+ K + E + T+ LS FT TLM K +
Sbjct: 1689 SAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSAT-QFTQPALTLMEKAAFEDL 1747
Query: 240 KDNGRGAIVNVS-----SISEASPWAL------FNVYAATKTVRY 273
K +G I + S+ E + AL ++ + + V Y
Sbjct: 1748 KS--KGLIPADATFAGHSLGEYA--ALASLADVMSIESLVEVVFY 1788
Score = 31.2 bits (70), Expect = 0.44
Identities = 34/247 (13%), Positives = 75/247 (30%), Gaps = 75/247 (30%)
Query: 86 VPDAEQYARSAVSTLGVTDTSTGFWVHG--IQSFVVT---------GCTDGIGRAY--AH 132
V ++ V L +T+ + + G I + T + + Y A
Sbjct: 72 VEPSKVGQFDQVLNLCLTEFENCY-LEGNDIHALAAKLLQENDTTLVKTKELIKNYITAR 130
Query: 133 ELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAV---------------DLSGT- 176
+A+R + S L + E G +++A+ DL T
Sbjct: 131 IMAKRPFDKKSNS----ALFRAVGE-----G-NAQLVAIFGGQGNTDDYFEELRDLYQTY 180
Query: 177 KAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETW----------DTL----- 221
+ + + ++ + + + + L + + W D L
Sbjct: 181 HVLVGDLIKFSAETLSELIRTTLDAEKVFTQGL--NILE--WLENPSNTPDKDYLLSIPI 236
Query: 222 SLNVVF-TTLMTKLILPR--------MKDNGRGA------IVNVSSISEASPWALFNVYA 266
S ++ L ++ + ++ +GA +V +I+E W F V +
Sbjct: 237 SCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFV-S 295
Query: 267 ATKTVRY 273
K +
Sbjct: 296 VRKAITV 302
Score = 27.7 bits (61), Expect = 6.0
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 12/50 (24%)
Query: 12 VVAVTVLHVLWKLVNGFRV-HVI----GQYVDL-----KQKYGSWAALRV 51
V + L V W+ F+ H++ G L + K G+ RV
Sbjct: 480 VDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGV--RV 527
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate
pathway, dehydrogenase, oxidoreductase; 2.00A
{Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A*
1e5q_A
Length = 450
Score = 39.1 bits (90), Expect = 0.001
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
Query: 125 GIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAVK 184
+ R L GI + + RTLE KK + ++ + +D++ A V
Sbjct: 13 FVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPIS-----LDVNDDAALDAEVA 67
Query: 185 NQ 186
Sbjct: 68 KH 69
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase,
oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora
erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Length = 486
Score = 38.5 bits (90), Expect = 0.001
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 119 VTGCTDGIGRAYAHELARRGI-NIVLISRT---LEKLKKTAKEIESLHGVQTKIIAVDLS 174
VTG T G+G A LARRG +++L+SR+ + + E+E+L G +T + A D++
Sbjct: 231 VTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GARTTVAACDVT 289
Query: 175 GTKAAIEAVKNQLGDHPV 192
++ E + D P+
Sbjct: 290 DRESVRELLGGIGDDVPL 307
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima
dehydrogenase; shikimate, NADPH, dehydroshikimate,
bifunctional enzyme; HET: DHK TLA NAP; 1.78A
{Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Length = 523
Score = 38.2 bits (89), Expect = 0.002
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 115 QSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEI 158
++ VV G G G+A A+ +G +V+ +RT E+ + A+ I
Sbjct: 365 KTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI 407
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces
nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Length = 496
Score = 38.2 bits (89), Expect = 0.002
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 13/118 (11%)
Query: 79 VRNKSFFVPDAEQYARSAVSTLGVTDTSTGFWVHGIQSFVVTGCTDGIGRAYAHELARRG 138
+R R A + V + VHG S +VTG T GIG A LA +G
Sbjct: 212 IRGSGVLAR------RLAHAAPAVPGSGKRPPVHG--SVLVTGGTGGIGGRVARRLAEQG 263
Query: 139 I-NIVLISRT---LEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAVKNQLGDHPV 192
++VL SR + E+E L GV+ I A D + +A + D P+
Sbjct: 264 AAHLVLTSRRGADAPGAAELRAELEQL-GVRVTIAACDAADREALAALLAELPEDAPL 320
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold,
transcriptional regulation, short chain dehyd reductase,
NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2
PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A*
2vuu_A*
Length = 352
Score = 37.9 bits (88), Expect = 0.003
Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
V G T G + A G ++ +L+ L A+E++++ V + L
Sbjct: 9 AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAIPNVT--LFQGPLLNNV 64
Query: 178 AAIEA 182
++
Sbjct: 65 PLMDT 69
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent
epimerase/dehydratase, LMR162, NESG, structural
genomics, PSI-2; 2.73A {Listeria monocytogenes}
Length = 221
Score = 36.9 bits (85), Expect = 0.004
Identities = 18/77 (23%), Positives = 28/77 (36%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+ G T G E RG + I R K+ +T K+I L + DLS
Sbjct: 4 GIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQN 63
Query: 178 AAIEAVKNQLGDHPVHI 194
++A + H+
Sbjct: 64 VVVDAYGISPDEAEKHV 80
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2;
short-chain dehydrogenase/reductase, rossman fold; 1.95A
{Streptomyces fradiae}
Length = 511
Score = 37.5 bits (87), Expect = 0.004
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 11/82 (13%)
Query: 119 VTGCTDGIGRAYAHELARRGI-NIVLISRTLEKLKKTAKEIESL--HGVQTKIIAVDLSG 175
+TG IGR A LA G +VL SR + A+ E L HG + A D+
Sbjct: 264 ITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDV-- 321
Query: 176 TKAAIEAVKNQLGDHP----VH 193
A +A+ + +P H
Sbjct: 322 --AERDALAALVTAYPPNAVFH 341
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain
dehydrogenase reductase, flavonoi oxidoreductase; HET:
NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Length = 346
Score = 36.2 bits (83), Expect = 0.009
Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Query: 114 IQSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDL 173
++ G T IG+ A +++R + AK ++L I+ +
Sbjct: 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI 69
Query: 174 SGTKAAIEAVKNQLGDHPVHILVNNVGS 201
+ +A + +K +H + I+V+ VG
Sbjct: 70 NEQEAMEKILK----EHEIDIVVSTVGG 93
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 34.9 bits (79), Expect = 0.011
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 11/35 (31%)
Query: 152 KKTAKEIE-SLHGVQTKIIAVD----LSGTKAAIE 181
K+ K+++ SL K+ A D L+ KA +E
Sbjct: 19 KQALKKLQASL-----KLYADDSAPALA-IKATME 47
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex,
amino-acid biosynthesis, aromatic A biosynthesis, NAD,
oxidoreductase; HET: NAD; 1.00A {Corynebacterium
glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Length = 283
Score = 35.2 bits (82), Expect = 0.013
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 11/74 (14%)
Query: 125 GIGRAYAHELARRGIN-IVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAV 183
G+G A A+ L G+ + + + + A I + G + ++ VD G + I A
Sbjct: 137 GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG-REAVVGVDARGIEDVIAA- 194
Query: 184 KNQLGDHPVHILVN 197
+VN
Sbjct: 195 --------ADGVVN 200
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design,
oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex
aeolicus} PDB: 2hk8_A 2hk7_A
Length = 275
Score = 35.2 bits (82), Expect = 0.014
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 125 GIGRAYAHELARRGINIVLISRTLEKLKKTAKE--IESLHGVQTKIIAVDL 173
G RA + L + G + L +RT EK K A++ +E ++ + I V +
Sbjct: 139 GASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQV 189
>3ic5_A Putative saccharopine dehydrogenase; structural genomics,
APC63807.2, N-terminal domain, saccharo dehydrogenase,
PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Length = 118
Score = 33.6 bits (77), Expect = 0.019
Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 8/63 (12%)
Query: 125 GIGRAYAHELARRG-INIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAV 183
IG+ A L ++ + L L + GV T VD +A+
Sbjct: 15 KIGQMIAALLKTSSNYSVTVADHDLAALAVLNRM-----GVAT--KQVDAKDEAGLAKAL 67
Query: 184 KNQ 186
Sbjct: 68 GGF 70
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction,
structural genomics, NPPSFA; 2.25A {Geobacillus
kaustophilus}
Length = 297
Score = 34.8 bits (81), Expect = 0.023
Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 17/93 (18%)
Query: 106 STGFWVHGIQSFVVTGCTDGIGRAYAHELARRGI-NIVLISRTLEKLKKTAKEIESLHGV 164
+ G + +V G G R L I + +RT+EK ++ +E +
Sbjct: 134 EMNITLDG-KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGD----- 186
Query: 165 QTKIIAVDLSGTKAAIEAVKNQLGDHPVHILVN 197
+ + L+ + + I++N
Sbjct: 187 ERRSAYFSLAEAETRLAE---------YDIIIN 210
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold,
structural genomics; HET: NAP F42; 1.65A {Archaeoglobus
fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Length = 212
Score = 34.1 bits (77), Expect = 0.029
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 119 VTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHG 163
+ G T +G+ A LA G IV+ SR EK + A E + G
Sbjct: 5 LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG 49
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics,
PSI-2, protein structure initiative; 1.40A {Lactococcus
lactis subsp}
Length = 219
Score = 34.2 bits (79), Expect = 0.030
Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 9/66 (13%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+ G T +G++ L+ I +R +E+ + ++ K + D+ T
Sbjct: 4 FIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQ----VPQYNNV-----KAVHFDVDWTP 54
Query: 178 AAIEAV 183
+
Sbjct: 55 EEMAKQ 60
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370,
Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2;
2.00A {Bacteroides thetaiotaomicron}
Length = 227
Score = 33.9 bits (78), Expect = 0.038
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
V+ G + +G A +E RG + + R EK+K + ++ + D+S
Sbjct: 8 VLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLK--------VKKADVSSLD 59
Query: 178 AAIEAVKNQLGDHPVHIL 195
E K D +
Sbjct: 60 EVCEVCKGA--DAVISAF 75
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural
genomics, PSI-2, protein structure initiative; HET: NDP;
1.78A {Lactobacillus casei atcc 334}
Length = 224
Score = 33.5 bits (76), Expect = 0.043
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKK-TAKEIESLHGVQTKIIAVDLSGT 176
V G T G A E RRG ++ + R +K + +L + DL
Sbjct: 4 AVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSV 63
Query: 177 KAAIEAVKNQLGDHPVHILVNNVGSL 202
A ++A+ G ++ ++ L
Sbjct: 64 DAVVDALSVPWGSGRGYLHLDFATHL 89
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent
aromatic alcohol reductases, pcber, PLR, IFR, lignans,
isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP:
c.2.1.2
Length = 308
Score = 33.7 bits (77), Expect = 0.045
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 114 IQSFVVTGCTDGIGRAYAHELARRGINIVLISR--TLEKLKKTAKEIESLHGVQTKIIAV 171
++ G T IGR A G L+ R T + A+ +ES I+
Sbjct: 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHG 63
Query: 172 DLSGTKAAIEAVKNQLGDHPVHILVNNVGS 201
+ + +EAVKN V ++++ VGS
Sbjct: 64 SIDDHASLVEAVKN------VDVVISTVGS 87
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation,
flavin reductase, diaphorase, green HAEM binding
protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2
PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Length = 206
Score = 33.4 bits (77), Expect = 0.048
Identities = 21/155 (13%), Positives = 44/155 (28%), Gaps = 35/155 (22%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK 177
+ G T G + + G + ++ R +L S ++ D+
Sbjct: 7 AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-------SEGPRPAHVVVGDVLQAA 59
Query: 178 AAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDTLSLNVVFTTLMTKLILP 237
+ V ++ +G+ + + T +E + I+
Sbjct: 60 DVDKTVAG------QDAVIVLLGTRNDLSPT-TVMSE----------------GARNIVA 96
Query: 238 RMKDNGRGAIVNVSSI-----SEASPWALFNVYAA 267
MK +G +V +S P L V
Sbjct: 97 AMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDD 131
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein;
structural genomics, oxidoreductase, amino-acid
biosynthesis; 2.10A {Clostridium acetobutylicum}
Length = 282
Score = 33.7 bits (78), Expect = 0.050
Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 125 GIGRAYAHELARRGI-NIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDL 173
G RA L +I +++R EK + E + + + + D+
Sbjct: 132 GAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSNLKGDV 181
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase,
epimerization, oxidoreductase; 1.88A {Streptomyces
venezuelae}
Length = 525
Score = 33.6 bits (77), Expect = 0.056
Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 16/89 (17%)
Query: 119 VTGCTDGIGRAYAHELARRG-INIVLISRTLEKLKKTA--------------KEIESLHG 163
VTG + A LAR G +++L + E+ L G
Sbjct: 256 VTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-G 314
Query: 164 VQTKIIAVDLSGTKAAIEAVKNQLGDHPV 192
++ DL+ +AA + HP+
Sbjct: 315 ATATVVTCDLTDAEAAARLLAGVSDAHPL 343
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein
structure initiative; HET: NAP; 2.35A
{Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Length = 287
Score = 33.3 bits (77), Expect = 0.070
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 125 GIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAVK 184
G RA A ELA+ NI++ +RT+EK + AKEI + V SG ++
Sbjct: 138 GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGLDVDLDG-- 193
Query: 185 NQLGDHPVHILVN 197
V I++N
Sbjct: 194 -------VDIIIN 199
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics,
putative 2-dehydropantoate 2-reductase, protein
structure initiative; 2.30A {Staphylococcus aureus
subsp}
Length = 294
Score = 33.0 bits (76), Expect = 0.073
Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 13/90 (14%)
Query: 126 IGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTK------------IIAVDL 173
+G A+EL + + LI R + + + K IIAV
Sbjct: 13 VGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKT 72
Query: 174 SGTKAAIEAVKNQLGDH-PVHILVNNVGSL 202
A I + + + + N G L
Sbjct: 73 HQLDAVIPHLTYLAHEDTLIILAQNGYGQL 102
>3dtt_A NADP oxidoreductase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Length = 245
Score = 32.8 bits (74), Expect = 0.076
Identities = 11/58 (18%), Positives = 20/58 (34%)
Query: 126 IGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAV 183
+GR A LA G + + +R + A+ ++ + AA V
Sbjct: 30 VGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADV 87
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics,
APC7755, NADP, P protein structure initiative; HET: MSE
NAP; 2.10A {Bacillus halodurans}
Length = 236
Score = 32.7 bits (75), Expect = 0.079
Identities = 26/156 (16%), Positives = 46/156 (29%), Gaps = 36/156 (23%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAV--DLSG 175
+V G + R EL +G V + R E+ E+ + + D S
Sbjct: 25 LVVGANGKVARYLLSELKNKGHEPVAMVRNEEQ----GPELRERGASDIVVANLEEDFSH 80
Query: 176 TKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDTLSLNVVFTTLMTKLI 235
A+I+AV V + S P + + T
Sbjct: 81 AFASIDAV---------------VFAAGSGPHTGADKTILIDLW-----------GAIKT 114
Query: 236 LPRMKDNGRGAIVNVSSI----SEASPWALFNVYAA 267
+ + G + VSS+ + P + + A
Sbjct: 115 IQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVA 150
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain
dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A
{Clarkia breweri}
Length = 321
Score = 32.2 bits (73), Expect = 0.16
Identities = 10/75 (13%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 114 IQSFVVTGCTDGIGRAYAHELARRGINIVLISR--TLEKLKKTAKEIESLHGVQTKIIAV 171
++ ++ G T IG+ + +R T + + + E + II
Sbjct: 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEG 63
Query: 172 DLSGTKAAIEAVKNQ 186
++ + + +K
Sbjct: 64 EMEEHEKMVSVLKQV 78
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET:
NAP; 2.20A {Rattus norvegicus}
Length = 201
Score = 31.6 bits (71), Expect = 0.19
Identities = 12/123 (9%), Positives = 40/123 (32%), Gaps = 5/123 (4%)
Query: 126 IGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQ--TKIIAVDLSGTKAAIEAV 183
G++ ++ + G ++V SR + + E L + ++ + L+ + + +
Sbjct: 30 FGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHREHYDFL 89
Query: 184 KNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDTLSLNVVFTTLMTKLILPRMKDNG 243
+L++ ++ + ++ E L + ++
Sbjct: 90 AELADSLKGRVLIDVS---NNQKMNQYPESNAEYLAQLVPGAHVVKAFNTISAWALQSGT 146
Query: 244 RGA 246
A
Sbjct: 147 LDA 149
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta
protein., structural genomics, PSI-2, protein STR
initiative; 1.60A {Staphylococcus aureus subsp}
Length = 289
Score = 31.5 bits (72), Expect = 0.22
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 118 VVTGCTDGIGRAYAHELARRGI-NIVLISRTLEKLKKTA 155
++TG T +G ++ I + + R +EK+
Sbjct: 4 MLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW 42
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural
genomics, NPPSFA, Na project on protein structural and
functional analyses; HET: SKM; 1.65A {Thermus
thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Length = 263
Score = 31.3 bits (72), Expect = 0.28
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 125 GIGRAYAHELARRGINIVLISRTLEKLKKTAKEI 158
G GRA A L G+ + + +RT ++ A+E
Sbjct: 126 GAGRAVAFALREAGLEVWVWNRTPQRALALAEEF 159
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic
alcohol reductases, pcber, PLR, IFR, lignans,
isoflavonoids, plant protein; 2.50A {Thuja plicata}
SCOP: c.2.1.2
Length = 313
Score = 31.4 bits (71), Expect = 0.29
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 114 IQSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLK-KTAKEIESLHGVQTKIIAVD 172
++ G T IG+ + G ++ R + + + K+I
Sbjct: 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 63
Query: 173 LSGTKAAIEAVKNQ 186
L + ++A+K
Sbjct: 64 LDDHQRLVDALKQV 77
>1xq6_A Unknown protein; structural genomics, protein structure initiative,
CESG, AT5G02240, NADP, center for eukaryotic structural
genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP:
c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Length = 253
Score = 31.0 bits (70), Expect = 0.30
Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 112 HGIQSFVVTGCTDGIGRAYAHELARRG--INIVLISRTLEKLKKTAKEIESLHG 163
+ + +VTG + G+ +L + R+ + +K E + G
Sbjct: 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIG 55
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A
{Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB:
1p74_A*
Length = 272
Score = 30.9 bits (71), Expect = 0.36
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 15/70 (21%)
Query: 128 RAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAVKNQL 187
+ L + NIVL +RT K KE+ I AV + + +
Sbjct: 132 KGVLLPLLQAQQNIVLANRTFSK----TKELAERFQPYGNIQAVSM-----------DSI 176
Query: 188 GDHPVHILVN 197
+++N
Sbjct: 177 PLQTYDLVIN 186
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft
separation, oxidoreductase; HET: NAP; 1.50A {Escherichia
coli} SCOP: c.2.1.7 c.58.1.5
Length = 271
Score = 31.0 bits (71), Expect = 0.39
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 15/73 (20%)
Query: 125 GIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAVK 184
G R L + + +RT+ + A+E+ L I A+ +
Sbjct: 129 GASRGVLLPLLSLDCAVTITNRTVSR----AEELAKLFAHTGSIQALSM----------- 173
Query: 185 NQLGDHPVHILVN 197
++L H +++N
Sbjct: 174 DELEGHEFDLIIN 186
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET:
NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A
2vrc_D
Length = 287
Score = 30.7 bits (70), Expect = 0.40
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 118 VVTGCTDGIGRAYAHELARR--GINIVLISRTLEKLKKTAKE 157
VTG T +G L ++ I+ I R +EK A +
Sbjct: 4 AVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQ 45
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A
{Escherichia coli} PDB: 2zcv_A*
Length = 286
Score = 30.7 bits (70), Expect = 0.45
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 118 VVTGCTDGIGRAYAHELARR--GINIVLISRTLEKLKKTAKE 157
+TG T +G L + IV I R K + A +
Sbjct: 3 AITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQ 44
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics,
PSI-biology, midwest center for structu genomics, MCSG,
veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm
2008} PDB: 3r14_A*
Length = 221
Score = 30.4 bits (68), Expect = 0.46
Identities = 12/70 (17%), Positives = 21/70 (30%), Gaps = 5/70 (7%)
Query: 118 VVTGCTDGIGRAYAHEL-ARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT 176
+ G I + L ++I L R L+ E + + +I
Sbjct: 9 TILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIP----PEIIDHERVTVIEGSFQNP 64
Query: 177 KAAIEAVKNQ 186
+AV N
Sbjct: 65 GXLEQAVTNA 74
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase;
1.60A {Medicago sativa}
Length = 307
Score = 30.2 bits (68), Expect = 0.56
Identities = 12/76 (15%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Query: 114 IQSFVVTGCTDGIGRAYAHELARRGINIVLISR---TLEKLKKTAKEIESLHGVQTKIIA 170
++ G T IGR + G + R T + + I++ + ++
Sbjct: 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61
Query: 171 VDLSGTKAAIEAVKNQ 186
D++ + ++A+K
Sbjct: 62 GDINDHETLVKAIKQV 77
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest
center for structu genomics, MCSG, unknown function;
HET: MNB; 2.30A {Shigella flexneri 2A}
Length = 236
Score = 30.2 bits (68), Expect = 0.56
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Query: 118 VVTGCTDGIGRAYAHELA-RRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGT 176
++ G I R ++LA ++ I L +R K+ K Q II D+
Sbjct: 27 LILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPT-----NSQ--IIMGDVLNH 79
Query: 177 KAAIEAVKNQ 186
A +A++ Q
Sbjct: 80 AALKQAMQGQ 89
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A
{Thermotoga maritima}
Length = 253
Score = 30.2 bits (69), Expect = 0.59
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 125 GIGRAYAHELARRGI-NIVLISRTLEKLKKTAKEIESL 161
G RA + L + G+ +I +++RT+E+ K ++
Sbjct: 118 GAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIF 155
>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS
mutation, iron, mental retardation, metal-binding,
oxidored phenylalanine catabolism; 1.75A {Homo sapiens}
PDB: 1sqi_A*
Length = 393
Score = 30.2 bits (67), Expect = 0.64
Identities = 22/145 (15%), Positives = 44/145 (30%), Gaps = 13/145 (8%)
Query: 84 FFVPDAEQYARSAVSTLG------------VTDTSTGFWVHGIQSFVVTGCTDGIGRAYA 131
F+V +A+Q A S +G + + G FV++ + +
Sbjct: 17 FWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMG 76
Query: 132 HELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAVKNQLGDHP 191
L + G + I+ +E ++ + V+ AV GD
Sbjct: 77 DHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGD-T 135
Query: 192 VHILVNNVGSLSSYPKSLTEDTEKE 216
H LV + + + +
Sbjct: 136 THTLVEKMNYIGQFLPGYEAPAFMD 160
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann
fold, transport, cell cycle, transferrin, flavoprotein,
alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB:
2vq3_A*
Length = 215
Score = 29.9 bits (67), Expect = 0.68
Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 126 IGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIA---VDLSGTKAAIEA 182
R+ A L G +V+ SR ++ + + + + + + ++ + +
Sbjct: 39 FARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREHYSS 98
Query: 183 VKNQLGDHPVHILVN 197
+ + ILV+
Sbjct: 99 LCSLSDQLAGKILVD 113
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex,
oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis}
SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Length = 382
Score = 30.3 bits (69), Expect = 0.69
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 125 GIGRAYAHELARRGINIVLISR 146
IG A A+ LA+ N L
Sbjct: 27 IIGSAIAYYLAKENKNTALFES 48
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold,
amino-acid biosynthesis, amino acid biosynthesis, NADP,
oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB:
3doo_A*
Length = 277
Score = 29.8 bits (68), Expect = 0.81
Identities = 7/38 (18%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 125 GIGRAYAHELARRGI-NIVLISRTLEKLKKTAKEIESL 161
G + A+EL + + + +RT+ + + I +
Sbjct: 127 GASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKI 164
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain
dehydrogenase/reductase, plant protein; HET: NDP; 1.50A
{Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A*
3c3x_A* 2qw8_A*
Length = 318
Score = 29.9 bits (67), Expect = 0.85
Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Query: 114 IQSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDL 173
++ G T IG + G + +R ++ + I+ +L
Sbjct: 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTR---PNSSKTTLLDEFQSLGAIIVKGEL 67
Query: 174 SGTKAAIEAVKNQ 186
+ +E +K
Sbjct: 68 DEHEKLVELMKKV 80
>1a76_A Flap endonuclease-1 protein; 5'-3' EXO/endo nuclease, DNA
replication, RTH, RAD27, DNA repair; 2.00A
{Methanocaldococcus jannaschii} SCOP: a.60.7.1 c.120.1.2
PDB: 1a77_A
Length = 326
Score = 29.8 bits (67), Expect = 0.98
Identities = 8/38 (21%), Positives = 13/38 (34%), Gaps = 9/38 (23%)
Query: 138 GINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSG 175
G+ + + K E L G K +A+D
Sbjct: 2 GVQF------GDFIPKNIISFEDLKG---KKVAIDGMN 30
>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase;
HET: HHH; 2.30A {Amycolatopsis orientalis}
Length = 357
Score = 29.4 bits (65), Expect = 1.1
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 8/57 (14%)
Query: 84 FFVPDAEQYARSAVSTLG--------VTDTSTGFWVHGIQSFVVTGCTDGIGRAYAH 132
+V + E A S V D + G + V+T T A A+
Sbjct: 11 MYVENLEVAAFSWVDKYAFAVAGTSRSADHRSIALRQGQVTLVLTEPTSDRHPAAAY 67
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein
structure initiative, MI center for structural genomics,
MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Length = 144
Score = 28.6 bits (65), Expect = 1.1
Identities = 3/26 (11%), Positives = 12/26 (46%)
Query: 134 LARRGINIVLISRTLEKLKKTAKEIE 159
+ + + R ++ ++ A++ E
Sbjct: 40 FSYPQYKVTVAGRNIDHVRAFAEKYE 65
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi
DSS, structural genomics, PSI-2, protein structure
initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Length = 286
Score = 29.5 bits (66), Expect = 1.2
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 20/84 (23%)
Query: 115 QSFVVTGCTDG-IGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDL 173
+ + G G R + LA +G I+ SR +++ + I + +
Sbjct: 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQM----EAIRASG-----AEPLLW 54
Query: 174 SGTKAAIEAVKNQLGDHPVHILVN 197
G + +++ V H+L++
Sbjct: 55 PGEEPSLDGV--------THLLIS 70
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure,
cell A cleavage on PAIR of basic residues, disease
mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Length = 54
Score = 26.9 bits (59), Expect = 1.4
Identities = 7/27 (25%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 2 ILILAVIGGFVVAVTVLHVLWKLVNGF 28
+++ V+GG ++ ++ +WK+ GF
Sbjct: 14 WVLVGVLGGLLLLTILVLAMWKV--GF 38
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C,
northeast structural genomics consortium, NESG, C
PSI-biology; 2.00A {Corynebacterium glutamicum}
Length = 516
Score = 29.3 bits (66), Expect = 1.4
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 5/52 (9%)
Query: 118 VVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKK-----TAKEIESLHGV 164
+TG +GRA +L G ++ + R K K + L G
Sbjct: 151 AITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGA 202
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics,
PSI-2, protein ST initiative; 1.95A {Haemophilus
influenzae}
Length = 286
Score = 29.2 bits (65), Expect = 1.4
Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 10/57 (17%)
Query: 121 GCTDGIGRAYAHELARRGINIVLISRT---LEKLKKTAKEIESLHGVQTKIIAVDLS 174
GC G GR + L+ G ++ + L +T ++ + D++
Sbjct: 128 GC--GQGR-NSLYLSLLGYDVTSWDHNENSIAFLNETKEK----ENLNISTALYDIN 177
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607;
structural genomics, PSI, protein structure initiative;
1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Length = 271
Score = 29.0 bits (66), Expect = 1.5
Identities = 6/50 (12%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Query: 125 GIGRAYAHELARRGI-NIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDL 173
G+ +A G + + +R ++ + A + + D+
Sbjct: 129 GMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLENQQADI 178
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding,
fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Length = 422
Score = 29.3 bits (65), Expect = 1.6
Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 27/139 (19%)
Query: 119 VTGCTDGIGRAYAHELA-RRGINIVLISRTLEKLKK-----------TAKEIESLHGVQT 166
V G + G G A A G + + + + G+ +
Sbjct: 66 VIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYS 125
Query: 167 KIIAVDLSGT---KAAIEAVKNQLGDHPVHILVNNVGS-----------LSSYPKSLTED 212
K I D IE +K ++G V ++V ++ S S K + +
Sbjct: 126 KSINGDAFSDAARAQVIELIKTEMGG-QVDLVVYSLASPVRKLPGSGEVKRSALKPIGQT 184
Query: 213 TEKETWDTLSLNVVFTTLM 231
DT ++ ++
Sbjct: 185 YTATAIDTNKDTIIQASIE 203
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc,
oxidoreductase; HET: MSE; 1.85A {Sulfolobus
solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A
1nvg_A 3i4c_A 2eer_A*
Length = 347
Score = 29.1 bits (66), Expect = 1.6
Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 14/98 (14%)
Query: 115 QSFVVTGCTDGIGRA---YAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAV 171
++ +V G G+G A A G I+ + E ++ AK + + +
Sbjct: 172 KTLLVVGAGGGLGTMAVQIAK--AVSGATIIGVDVREEAVEA-AKRAGADYVINAS---- 224
Query: 172 DLSGTKAAIEAVKNQLGDHPVHILVNNVGSLSSYPKSL 209
+ + ++ V +++ S +
Sbjct: 225 ----MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYP 258
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA,
ketopantoate reductase, rossman fold, monomer, APO,
oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7
c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Length = 291
Score = 28.8 bits (65), Expect = 1.7
Identities = 12/93 (12%), Positives = 35/93 (37%), Gaps = 16/93 (17%)
Query: 126 IGRAYAHELARRGINIVLISRTLEKL---------------KKTAKEIESLHGVQTKIIA 170
+G+ + L ++G + R + TA + + L ++
Sbjct: 11 LGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVT 70
Query: 171 VDLSGTKAAIEAVKNQLGDH-PVHILVNNVGSL 202
+ A++++ + L P+ ++ N +G++
Sbjct: 71 LKAWQVSDAVKSLASTLPVTTPILLIHNGMGTI 103
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component;
helix; 2.50A {Streptococcus mutans}
Length = 120
Score = 28.0 bits (62), Expect = 1.8
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 125 GIGRAYAHE---LARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIE 181
G R+ HE R N +L +KL++ E+ H QT ++ SGT+ IE
Sbjct: 35 GNARSIVHEAFDAMREK-NYILAE---QKLQEANDELLKAHQAQTDLLQEYASGTEIKIE 90
Query: 182 AVKNQLGDH 190
+ DH
Sbjct: 91 IIMVHAQDH 99
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta
fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central
AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Length = 115
Score = 27.7 bits (62), Expect = 1.8
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 100 LGVTDTSTGFWVHGIQSFVVTGCTDGIGRAYAHELARRGINIVLISRTL-EKLKKTAKEI 158
+G D+ + F + G T T+ R E+A+ ++ I+ + +T +
Sbjct: 8 VGDKDSVSPFRLFGFDVQHGTTKTE--IRKTIDEMAKNEYGVIYITEQCANLVPETIERY 65
Query: 159 ES 160
+
Sbjct: 66 KG 67
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty
acid biosynthesis II, short-chain dehydrogenase
reductase superfamily; HET: NAI; 1.80A {Yersinia pestis}
PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Length = 405
Score = 28.9 bits (64), Expect = 2.1
Identities = 25/152 (16%), Positives = 48/152 (31%), Gaps = 28/152 (18%)
Query: 106 STGFWVHGIQSFVVTGCTDGIGRAYAHELARR-GINIVLISRTLEKLKKTA--------- 155
+ G +G + +V G + G G A A G + + + +
Sbjct: 39 TEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSA 98
Query: 156 --KEIESLHGVQTKIIAVDLSGT---KAAIEAVKNQLGDHPVHILVNNVGS--------- 201
+ + G+ K I D + I+A+K LG V ++ ++ S
Sbjct: 99 AFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLG--QVDQVIYSLASPRRTHPKTG 156
Query: 202 --LSSYPKSLTEDTEKETWDTLSLNVVFTTLM 231
+S K + DT + + L
Sbjct: 157 EVFNSALKPIGNAVNLRGLDTDKEVIKESVLQ 188
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component;
mutagenesis, transferase, sugar transport,
phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A
2wwv_A
Length = 103
Score = 27.5 bits (61), Expect = 2.2
Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
Query: 125 GIGRAYAHE---LARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIE 181
G R+ A+ A++G + + ++ + H VQTK+I D K +
Sbjct: 16 GQARSLAYAALKQAKQG----DFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVS 71
Query: 182 AVKNQLGDH 190
V H
Sbjct: 72 LVLVHAQLH 80
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating
complex, structural GEN PSI-2-2, protein structure
initiative; HET: AMP; 3.45A {Thermotoga maritima}
Length = 218
Score = 28.3 bits (64), Expect = 2.3
Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 126 IGRAYAHELARRGINIVLISRTLEKLKKTAKEIES--LHG 163
A + R +V+I++ E ++ AK++++ +HG
Sbjct: 11 TAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHG 50
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase,
phosphotransferase system; 2.10A {Lactococcus lactis}
SCOP: a.7.2.1 PDB: 1e2a_A
Length = 105
Score = 27.5 bits (61), Expect = 2.3
Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 7/69 (10%)
Query: 125 GIGRAYAHE---LARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIE 181
G R+ E A G ++ + + I H QT ++A + SG +
Sbjct: 18 GDARSKLLEALKAAENG----DFAKADSLVVEAGSCIAEAHSSQTGMLAREASGEELPYS 73
Query: 182 AVKNQLGDH 190
H
Sbjct: 74 VTMMHGQLH 82
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A
{Pseudomonas aeruginosa}
Length = 342
Score = 28.4 bits (64), Expect = 2.3
Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 41/168 (24%)
Query: 119 VTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKA 178
V G T +G A + G ++VLI R ++++ L ++ + ++
Sbjct: 18 VLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-------LAYLEPECRVAEMLDHAG 70
Query: 179 AIEAVKNQLGDHPVHILVNNVGSLSSYPKSLTEDTEKETWDTLSLNVVFTTLMTKLILPR 238
A++ + ++ + G S P+ +E + + T
Sbjct: 71 LERALRG------LDGVIFSAGYYPSRPRR-----WQEEVAS---AL----GQTNPFYAA 112
Query: 239 MKDNGRGAIVNVSSIS------------EASPW----ALFNVYAATKT 270
I+ V S E + + + Y K
Sbjct: 113 CLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKW 160
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL
oxidoreductase, alpha/beta domain, rossmann fold; HET:
SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A*
3phj_A*
Length = 269
Score = 28.3 bits (64), Expect = 2.3
Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 125 GIGRAYAHELARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDL 173
G +A A EL ++G+ + +++R+ L + + ++ A DL
Sbjct: 128 GSAKALACELKKQGLQVSVLNRSSRGLDF-FQRLGCDCFMEPPKSAFDL 175
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif,
gamma-N6M-adenosine methyltrans S-adenosyl-methionine
binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Length = 878
Score = 28.7 bits (63), Expect = 2.3
Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 11/71 (15%)
Query: 202 LSSYPKSLTEDTEKETWDTLSLNVVFTTLMTKLILPRMKDNGRGAIVNVSSISEASPWAL 261
+ LT + + + + + +F L+T+L ++D + + L
Sbjct: 422 FAHKIIQLTGNRPQTLFGQIGVEALFLELVTEL----VQDGTVISAIMPKQY-------L 470
Query: 262 FNVYAATKTVR 272
+K R
Sbjct: 471 TAQGNESKAFR 481
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE
adhesion; NMR {Homo sapiens}
Length = 54
Score = 26.1 bits (57), Expect = 2.5
Identities = 7/27 (25%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 2 ILILAVIGGFVVAVTVLHVLWKLVNGF 28
+++L+ G ++ + ++ LWK+ GF
Sbjct: 11 VILLSAFAGLLLLMLLILALWKI--GF 35
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein,
spectrin repeat-like, transferase, structural genomics;
HET: MSE; 2.30A {Bacillus anthracis}
Length = 109
Score = 27.1 bits (60), Expect = 2.7
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 125 GIGRAYAHE---LARRGINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIE 181
G R++A E A++G ++ E + K + I H QT++I + G K I
Sbjct: 20 GNARSFAMEALQFAKQG----KMAEADEAMVKAKEAINEAHHFQTELIQSEARGEKTEIS 75
Query: 182 AVKNQLGDH 190
+ DH
Sbjct: 76 VLLIHAQDH 84
>1p9b_A Adenylosuccinate synthetase; ligase; HET: IMO GDP; 2.00A
{Plasmodium falciparum} SCOP: c.37.1.10
Length = 442
Score = 28.2 bits (64), Expect = 3.1
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 125 GIGRAYAHELARRGINIV-LISRTL--EKLKKTAKEIESLHGVQ 165
GIG Y+ + +R GI + L + K + L+ +
Sbjct: 144 GIGPCYSTKASRIGIRLGTLKNFENFKNMYSKLIDHLMDLYNIT 187
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A
{Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Length = 208
Score = 27.7 bits (62), Expect = 3.4
Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 138 GINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK-AAIEAVK 184
G+ ++ I + E+++ AK + +KI+ V + A + V+
Sbjct: 43 GLYVLDIRKLDERIRVAAKFLSRYEP--SKILLV---AARQYAHKPVQ 85
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment,
alternative splicing, calcium, cell adhesion, cleavage
on PAIR of basic residues; NMR {Homo sapiens} PDB:
2k9j_A
Length = 42
Score = 25.2 bits (55), Expect = 3.6
Identities = 7/27 (25%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 2 ILILAVIGGFVVAVTVLHVLWKLVNGF 28
+++ V+GG ++ ++ +WK+ GF
Sbjct: 12 WVLVGVLGGLLLLTILVLAMWKV--GF 36
>2w58_A DNAI, primosome component (helicase loader); ATP-binding,
nucleotide-binding, hydrolase; HET: ADP; 2.50A
{Geobacillus kaustophilus HTA426}
Length = 202
Score = 27.3 bits (61), Expect = 4.1
Identities = 16/119 (13%), Positives = 46/119 (38%), Gaps = 21/119 (17%)
Query: 62 HIAPAFVSTKMNNFSYRVRNKSFFVPDAEQYARSAVSTLGVTDTSTGFWVHGIQSFVVTG 121
+ + +++ + A ++A V+ ++ + G
Sbjct: 14 FMPREILRASLSDVDLNDDGRI----KAIRFAERFVAEYE--------PGKKMKGLYLHG 61
Query: 122 CTDGIGRAY-----AHELARRGINIVLIS--RTLEKLKKTAKEIESLHGVQTKIIAVDL 173
G+G+ Y A+ELA+R ++ +++ +LK + ++ ++++ I V +
Sbjct: 62 SF-GVGKTYLLAAIANELAKRNVSSLIVYVPELFRELKHSLQD-QTMNEKLDYIKKVPV 118
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding
protein; HET: PLM; 2.50A {Bacillus subtilis}
Length = 315
Score = 27.6 bits (62), Expect = 4.3
Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 139 INIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTKAAIEAVKNQLGDHPVHI 194
I + E+L K+ + S+H ++ +SGT ++ A + + + V+
Sbjct: 98 PPIGELVALYEELGKSYDAVISIH------LSSGISGTFSSAAAADSMVDNIDVYP 147
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces
cerevisiae} PDB: 2h0r_A
Length = 216
Score = 27.5 bits (61), Expect = 4.6
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 9/62 (14%)
Query: 112 HGIQSFVVTG-CTDGIGRAYAHELARRGINIVLI-------SRTLEKLKKTAKEIESLHG 163
H + G + +A A A G ++ S E + K +E+++ H
Sbjct: 152 HHTDEVYIVGVALEYXVKATAISAAELGYKTTVLLDYTRPISDDPEVINKVKEELKA-HN 210
Query: 164 VQ 165
+
Sbjct: 211 IN 212
>1h70_A NG, NG-dimethylarginine dimethylaminohydrolase; DDAH, nitric oxide
synthase inhibitor; HET: CIR; 1.8A {Pseudomonas
aeruginosa} SCOP: d.126.1.3 PDB: 3rhy_A 3bpb_A*
Length = 255
Score = 27.3 bits (60), Expect = 4.6
Identities = 24/150 (16%), Positives = 43/150 (28%), Gaps = 6/150 (4%)
Query: 24 LVNGFRVHVIGQYVDLKQKYGSWAALRVEYQKYGITVQHIAPAFVSTKMNNFSYRVRNKS 83
LV+G +G+ D + A Q + + + P + F V +
Sbjct: 15 LVDGLTSSHLGK-PDYAKALEQHNAYIRALQTCDVDI-TLLPPDERFPDSVF---VEDPV 69
Query: 84 FFVPDAEQYAR-SAVSTLGVTDTSTGFWVHGIQSFVVTGCTDGIGRAYAHELARRGINIV 142
R A S G T+ V G A + I
Sbjct: 70 LCTSRCAIITRPGAESRRGETEIIEETVQRFYPGKVERIEAPGTVEAGDIMMVGDHFYIG 129
Query: 143 LISRTLEKLKKTAKEIESLHGVQTKIIAVD 172
+RT + + I HG+ ++ ++
Sbjct: 130 ESARTNAEGARQMIAILEKHGLSGSVVRLE 159
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase,
oxidoreductase, SDR, cardenolides, cardiac glycosides;
HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Length = 364
Score = 27.4 bits (60), Expect = 5.7
Identities = 11/81 (13%), Positives = 24/81 (29%), Gaps = 15/81 (18%)
Query: 119 VTGCTDGIGRAYAHELARRGI-----NIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDL 173
+ G T IG + A L + ++R +T + + + D+
Sbjct: 6 IVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR------RTRPAWHEDNPIN--YVQCDI 57
Query: 174 SGTKAAIEAVKNQLGDHPVHI 194
S + + H+
Sbjct: 58 SDPDDSQAKLSP--LTDVTHV 76
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA;
1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Length = 103
Score = 26.1 bits (58), Expect = 6.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 30 VHVIGQYVDLKQKYGSWAAL 49
V VIG+YV LK++ ++ L
Sbjct: 20 VDVIGEYVQLKRQGRNYFGL 39
>2ef5_A Arginase; TTHA1496, structural genomic NPPSFA, national project on
protein structural and function analyses; HET: LYS;
2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A
Length = 290
Score = 26.8 bits (60), Expect = 7.2
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 171 VDLSGTKAAIEAVKNQLGDHPVHI 194
VD G E V L P+H+
Sbjct: 191 VDRLGVARIAEEVLKHLQGLPLHV 214
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain,
structural genomics, NPPSFA; NMR {Drosophila
melanogaster}
Length = 168
Score = 26.4 bits (58), Expect = 7.7
Identities = 6/32 (18%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 242 NGRGAIVNVSSISEASP-WALFNVYAATKTVR 272
N V ++ I S W + ++Y +
Sbjct: 127 NNEEKGVILTGIDTRSLLWTVIDIYGNCTGIE 158
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB:
2xzn_B
Length = 241
Score = 26.4 bits (58), Expect = 8.8
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 138 GINIVLISRTLEKLKKTAKEIESLHGVQTKIIAVDLSGTK-AAIEAVK 184
GI+ + I T +K+K A+ I ++ ++ V A+K
Sbjct: 40 GIHYINIEETWQKIKLAARVIAAVQH-PEDVMVV--CSRIYGQRAAIK 84
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase,
hydrolase; NMR {Methanosarcina mazei}
Length = 101
Score = 25.5 bits (56), Expect = 9.3
Identities = 13/91 (14%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
Query: 97 VSTLGVTDTSTGFWVHGIQSFVVTGCTDGIGRAYAHELARRGINIVLISRTLEKLKKTAK 156
++ +G ++ TGF + GI T A L + + I+++ + +
Sbjct: 3 LAVIGKSEFVTGFRLAGISKVYETPDIPATESAVRSVLEDKSVGILVMHNDD--IGNLPE 60
Query: 157 EIESLHGVQTKIIAVDLSGTKAAIEAVKNQL 187
+ + V L G+ + +++ ++
Sbjct: 61 VLRKNLNESVQPTVVALGGSGSGSTSLREKI 91
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 26.7 bits (58), Expect = 9.8
Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 23/84 (27%)
Query: 17 VLHVLW-------------KLVN---------GFRVHVIGQYVDLKQKYGSWAAL-RVEY 53
+L ++W KL + + Y++LK K + AL R
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIV 450
Query: 54 QKYGITVQHIAPAFVSTKMNNFSY 77
Y I + + ++ + Y
Sbjct: 451 DHYNIPKTFDSDDLIPPYLDQYFY 474
>3niq_A 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pseudomonas
aeruginosa} PDB: 3nip_A
Length = 326
Score = 26.4 bits (59), Expect = 10.0
Identities = 4/24 (16%), Positives = 10/24 (41%)
Query: 171 VDLSGTKAAIEAVKNQLGDHPVHI 194
G +A + + +G P ++
Sbjct: 214 FVELGVEATLAEARRVVGAGPTYV 237
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.134 0.389
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,123,631
Number of extensions: 247523
Number of successful extensions: 1928
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1482
Number of HSP's successfully gapped: 467
Length of query: 273
Length of database: 6,701,793
Length adjustment: 92
Effective length of query: 181
Effective length of database: 4,133,061
Effective search space: 748084041
Effective search space used: 748084041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.1 bits)