BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy10634
         (303 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1U4Q|A Chain A, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken
           Brain Alpha Spectrin
 pdb|1U4Q|B Chain B, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken
           Brain Alpha Spectrin
          Length = 322

 Score =  104 bits (259), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 29/235 (12%)

Query: 64  RYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQK 123
           R++ ++     RR  L ++  L+Q+ RD+DDE  W+ EK+ L  S D G  LT VQ+L+K
Sbjct: 90  RFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRK 149

Query: 124 KHQALETELASREPVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRL 183
           KH+ LE ELA+ EP +  +    K++S         I+   +   D    L+  A+ R  
Sbjct: 150 KHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQ 209

Query: 184 RLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHS 243
           RL ++LE Q                             QF A V E E W+ EK  ++ S
Sbjct: 210 RLEESLEYQ-----------------------------QFVANVEEEEAWINEKMTLVAS 240

Query: 244 SDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKK 298
            D+G    ++  L+KK E+ E +    +  V  +    + L+ +N+   +NI+ K
Sbjct: 241 EDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAK 295



 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 29/201 (14%)

Query: 98  WLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAA 157
           WL E E L  S D G  L +V +L KKHQ LE ++++ E  +  L S+A  +  S+ F  
Sbjct: 18  WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDT 77

Query: 158 ARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHS 217
           ++++     +  +   +++ A+ RR +L    ES  L+                      
Sbjct: 78  SQVKDKRETINGRFQRIKSMAAARRAKL---NESHRLH---------------------- 112

Query: 218 LLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHL 277
               QF+ ++ + E W+KEKK ++ S D+GRD   V +L KK + LE EL + +  +  +
Sbjct: 113 ----QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGV 168

Query: 278 SKLCQSLLDRNHFDSKNISKK 298
               + L D N    + I ++
Sbjct: 169 LDTGKKLSDDNTIGKEEIQQR 189



 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 65/121 (53%)

Query: 65  YRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKK 124
           ++ L++    R   LE++L   Q++ +V++E  W+ EK  L  S D G++L A+Q L KK
Sbjct: 197 WKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKK 256

Query: 125 HQALETELASREPVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLR 184
           H+A ET+    +  V+ + +  + + +  +     I      L+ K++ L  AA+ R+ +
Sbjct: 257 HEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAK 316

Query: 185 L 185
           L
Sbjct: 317 L 317



 Score = 38.9 bits (89), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 43/77 (55%)

Query: 223 FYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQ 282
           F   + + + WL E + +L S D+G+D  SV +L+KK + LE ++ + +  +  L+    
Sbjct: 8   FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQAD 67

Query: 283 SLLDRNHFDSKNISKKQ 299
           SL+  + FD+  +  K+
Sbjct: 68  SLMTSSAFDTSQVKDKR 84


>pdb|1CUN|A Chain A, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
           Alpha Spectrin
 pdb|1CUN|B Chain B, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
           Alpha Spectrin
 pdb|1CUN|C Chain C, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
           Alpha Spectrin
          Length = 213

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 29/215 (13%)

Query: 84  LLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALA 143
           +++Q+ RD+DDE  W+ EK+ L  S D G  LT VQ+L+KKH+ LE ELA+ EP + ++ 
Sbjct: 1   MVHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVL 60

Query: 144 SRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLES 203
              K++S         I+   +   D    L+  A+ R  RL ++LE Q           
Sbjct: 61  DTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQ----------- 109

Query: 204 NLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESL 263
                             QF A V E E W+ EK  ++ S D+G    ++  L+KK E+ 
Sbjct: 110 ------------------QFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAF 151

Query: 264 ERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKK 298
           E +    +  V  +    + L+ +N+   +NI+ K
Sbjct: 152 ETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAK 186



 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 65/121 (53%)

Query: 65  YRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKK 124
           ++ L++    R   LE++L   Q++ +V++E  W+ EK  L  S D G++L A+Q L KK
Sbjct: 88  WKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKK 147

Query: 125 HQALETELASREPVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLR 184
           H+A ET+    +  V+ + +  + + +  +     I      L+ K++ L  AA+ R+ +
Sbjct: 148 HEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAK 207

Query: 185 L 185
           L
Sbjct: 208 L 208


>pdb|1U5P|A Chain A, Crystal Structure Of Repeats 15 And 16 Of Chicken Brain
           Alpha Spectrin
          Length = 216

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 69/127 (54%)

Query: 64  RYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQK 123
           R++ ++     RR  L ++  L+Q+ RD+DDE  W+ EK+ L  S D G  LT VQ+L+K
Sbjct: 90  RFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRK 149

Query: 124 KHQALETELASREPVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRL 183
           KH+ LE ELA+ EP +  +    K++S         I+   +   D    L+  A+ R  
Sbjct: 150 KHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQ 209

Query: 184 RLLDALE 190
           RL ++LE
Sbjct: 210 RLEESLE 216



 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 29/201 (14%)

Query: 98  WLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAA 157
           WL E E L  S D G  L +V +L KKHQ LE ++++ E  +  L S+A  +  S+ F  
Sbjct: 18  WLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDT 77

Query: 158 ARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHS 217
           ++++     +  +   +++ A+ RR +L    ES  L+                      
Sbjct: 78  SQVKDKRETINGRFQRIKSMAAARRAKLN---ESHRLH---------------------- 112

Query: 218 LLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHL 277
               QF+ ++ + E W+KEKK ++ S D+GRD   V +L KK + LE EL + +  +  +
Sbjct: 113 ----QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGV 168

Query: 278 SKLCQSLLDRNHFDSKNISKK 298
               + L D N    + I ++
Sbjct: 169 LDTGKKLSDDNTIGKEEIQQR 189



 Score = 39.3 bits (90), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 43/77 (55%)

Query: 223 FYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQ 282
           F   + + + WL E + +L S D+G+D  SV +L+KK + LE ++ + +  +  L+    
Sbjct: 8   FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQAD 67

Query: 283 SLLDRNHFDSKNISKKQ 299
           SL+  + FD+  +  K+
Sbjct: 68  SLMTSSAFDTSQVKDKR 84


>pdb|1AJ3|A Chain A, Solution Structure Of The Spectrin Repeat, Nmr, 20
           Structures
          Length = 110

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 55/101 (54%)

Query: 85  LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALAS 144
           L+Q+ RD+DDE  W+ EK+ L  S D G  LT VQ+L+KKH+ LE ELA+ EP +  +  
Sbjct: 9   LHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLD 68

Query: 145 RAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRL 185
             K++S         I+   +   D    L+  A+ R  RL
Sbjct: 69  TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRL 109



 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 46/86 (53%)

Query: 213 KTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQH 272
           K   S  + QF+ ++ + E W+KEKK ++ S D+GRD   V +L KK + LE EL + + 
Sbjct: 2   KLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEP 61

Query: 273 TVGHLSKLCQSLLDRNHFDSKNISKK 298
            +  +    + L D N    + I ++
Sbjct: 62  AIQGVLDTGKKLSDDNTIGKEEIQQR 87


>pdb|3FB2|A Chain A, Crystal Structure Of The Human Brain Alpha Spectrin
           Repeats 15 And 16. Northeast Structural Genomics
           Consortium Target Hr5563a.
 pdb|3FB2|B Chain B, Crystal Structure Of The Human Brain Alpha Spectrin
           Repeats 15 And 16. Northeast Structural Genomics
           Consortium Target Hr5563a
          Length = 218

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 29/215 (13%)

Query: 85  LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALAS 144
           L ++L D  D   W+     L  S +L   +T  ++L ++HQ   TE+ +R     A   
Sbjct: 15  LQRFLSDFRDLXSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQ 74

Query: 145 RAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESN 204
             +Q+    H+A+  I+     L  + A L  A   RR  L   LE Q+           
Sbjct: 75  FGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLELQL----------- 123

Query: 205 LLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLE 264
                             F+ +  +AE W   ++  L++ D G   DSV +LIKK E  +
Sbjct: 124 ------------------FHRDCEQAENWXAAREAFLNTEDKGDSLDSVEALIKKHEDFD 165

Query: 265 RELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQ 299
           + +   +  +  L      L+   H+   +IS ++
Sbjct: 166 KAINVQEEKIAALQAFADQLIAAGHYAKGDISSRR 200



 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%)

Query: 75  RRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELAS 134
           RR  L+  L L  + RD +    W   +E    + D G+SL +V++L KKH+  +  +  
Sbjct: 111 RRXXLDQCLELQLFHRDCEQAENWXAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINV 170

Query: 135 REPVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLR 175
           +E  ++AL + A Q+  + H+A   I    + + D+   L+
Sbjct: 171 QEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLK 211


>pdb|3KBU|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human
           Erythroid Beta Spectrin (Repeats 13-15) In Complex With
           The Spectrin Binding Domain Of Human Erythroid Ankyrin
           (Zu5-Ank), Emts Derivative
 pdb|3KBU|B Chain B, Crystal Structure Of The Ankyrin Binding Domain Of Human
           Erythroid Beta Spectrin (Repeats 13-15) In Complex With
           The Spectrin Binding Domain Of Human Erythroid Ankyrin
           (Zu5-Ank), Emts Derivative
          Length = 326

 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 30/212 (14%)

Query: 87  QYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRA 146
           QY  D D+   W+ E+E   +S ++         + K+H   +  +      +  LASRA
Sbjct: 8   QYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRA 67

Query: 147 KQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLL 206
           + +  + H    +I      +    A L++ A  R+ +L       M +L          
Sbjct: 68  QGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVACERKRKL-----ENMYHL---------- 112

Query: 207 NPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERE 266
                         FQ   E  + E W+ EK+ +  S + G+D D V  L  K     RE
Sbjct: 113 --------------FQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARE 158

Query: 267 LVSF-QHTVGHLSKLCQSLLDRNHFDSKNISK 297
             +  Q  V +++   + L+D  H ++  I++
Sbjct: 159 TGAIGQERVDNVNAFIERLIDAGHSEAATIAE 190



 Score = 40.0 bits (92), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 222 QFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLC 281
           Q+Y +  EAE W+ E++  + S +  +DE+  + ++K+    +R +  +   +  L+   
Sbjct: 8   QYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRA 67

Query: 282 QSLLDRNHFDSKNISK--KQVNTH 303
           Q LL   H + + I +   QV+ H
Sbjct: 68  QGLLSAGHPEGEQIIRLQGQVDKH 91



 Score = 38.5 bits (88), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 18/140 (12%)

Query: 65  YRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKK 124
           Y  L++    R+  LE+   L+Q  R+ DD  QW+ EKE +A S ++G     V  L+ K
Sbjct: 92  YAGLKDVACERKRKLENMYHLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDK 151

Query: 125 HQ--ALETELASREPV--VSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASV 180
            +  A ET    +E V  V+A   R   +  + H  AA I      L +  A        
Sbjct: 152 FRDFARETGAIGQERVDNVNAFIER---LIDAGHSEAATIAEWKDGLNEMWAD------- 201

Query: 181 RRLRLLDALESQMLYLASGY 200
               LL+ ++++M  LA+ Y
Sbjct: 202 ----LLELIDTRMQLLAASY 217


>pdb|3KBT|A Chain A, Crystal Structure Of The Ankyrin Binding Domain Of Human
           Erythroid Beta Spectrin (Repeats 13-15) In Complex With
           The Spectrin Binding Domain Of Human Erythroid Ankyrin
           (Zu5-Ank)
 pdb|3KBT|B Chain B, Crystal Structure Of The Ankyrin Binding Domain Of Human
           Erythroid Beta Spectrin (Repeats 13-15) In Complex With
           The Spectrin Binding Domain Of Human Erythroid Ankyrin
           (Zu5-Ank)
          Length = 326

 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 30/212 (14%)

Query: 87  QYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRA 146
           QY  D D+   W+ E+E   +S ++         + K+H   +  +      +  LASRA
Sbjct: 8   QYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRA 67

Query: 147 KQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLL 206
           + +  + H    +I      +    A L++ A  R+ +L       M +L          
Sbjct: 68  QGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKL-----ENMYHL---------- 112

Query: 207 NPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERE 266
                         FQ   E  + E W+ EK+ +  S + G+D D V  L  K     RE
Sbjct: 113 --------------FQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARE 158

Query: 267 LVSF-QHTVGHLSKLCQSLLDRNHFDSKNISK 297
             +  Q  V +++   + L+D  H ++  I++
Sbjct: 159 TGAIGQERVDNVNAFIERLIDAGHSEAATIAE 190



 Score = 40.0 bits (92), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 222 QFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLC 281
           Q+Y +  EAE W+ E++  + S +  +DE+  + ++K+    +R +  +   +  L+   
Sbjct: 8   QYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRA 67

Query: 282 QSLLDRNHFDSKNISK--KQVNTH 303
           Q LL   H + + I +   QV+ H
Sbjct: 68  QGLLSAGHPEGEQIIRLQGQVDKH 91



 Score = 40.0 bits (92), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 18/140 (12%)

Query: 65  YRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKK 124
           Y  L++  + R+  LE+   L+Q  R+ DD  QW+ EKE +A S ++G     V  L+ K
Sbjct: 92  YAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDK 151

Query: 125 HQ--ALETELASREPV--VSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASV 180
            +  A ET    +E V  V+A   R   +  + H  AA I      L +  A        
Sbjct: 152 FRDFARETGAIGQERVDNVNAFIER---LIDAGHSEAATIAEWKDGLNEMWAD------- 201

Query: 181 RRLRLLDALESQMLYLASGY 200
               LL+ ++++M  LA+ Y
Sbjct: 202 ----LLELIDTRMQLLAASY 217


>pdb|3LBX|A Chain A, Crystal Structure Of The Erythrocyte Spectrin
           Tetramerization Domain Complex
          Length = 161

 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 6/95 (6%)

Query: 64  RYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLG-NSLTAVQSLQ 122
           RY+S +E +  R   LED+  L  + RD DD  +W++EK  + + TD      T +Q   
Sbjct: 37  RYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEK--VNILTDKSYEDPTNIQGKY 94

Query: 123 KKHQALETELASREPVVSALASRAKQ---MSRSAH 154
           +KHQ+LE E+ ++  ++S L    ++   M  SAH
Sbjct: 95  QKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAH 129


>pdb|1OWA|A Chain A, Solution Structural Studies On Human Erythrocyte Alpha
           Spectrin N Terminal Tetramerization Domain
          Length = 156

 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 6/95 (6%)

Query: 64  RYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLG-NSLTAVQSLQ 122
           RY+S +E +  R   LED+  L  + RD DD  +W++EK  + + TD      T +Q   
Sbjct: 34  RYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEK--VNILTDKSYEDPTNIQGKY 91

Query: 123 KKHQALETELASREPVVSALASRAKQ---MSRSAH 154
           +KHQ+LE E+ ++  ++S L    ++   M  SAH
Sbjct: 92  QKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAH 126


>pdb|3LBX|B Chain B, Crystal Structure Of The Erythrocyte Spectrin
           Tetramerization Domain Complex
          Length = 185

 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%)

Query: 64  RYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQK 123
           R + + E  + R + L   L + Q+ RD      WL+ +EP   S D G+++ +V+ L K
Sbjct: 91  RRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIK 150

Query: 124 KHQALETELASREPVVSAL 142
           +H+A E   AS     +AL
Sbjct: 151 RHEAFEKSTASWAERFAAL 169



 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%)

Query: 218 LLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHL 277
           L + QF  + + AE WL  ++P L S DFG   DSV  LIK+ E+ E+   S+      L
Sbjct: 110 LEVCQFSRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAAL 169

Query: 278 SK 279
            K
Sbjct: 170 EK 171


>pdb|3F31|A Chain A, Crystal Structure Of The N-Terminal Region Of
           Alphaii-Spectr Tetramerization Domain
 pdb|3F31|B Chain B, Crystal Structure Of The N-Terminal Region Of
           Alphaii-Spectr Tetramerization Domain
          Length = 149

 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 1/97 (1%)

Query: 64  RYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQK 123
           RY   +E   +RR  LED+     + RD ++  +W+ EK  +A   +  +  T +Q   +
Sbjct: 27  RYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDENYKDP-TNLQGKLQ 85

Query: 124 KHQALETELASREPVVSALASRAKQMSRSAHFAAARI 160
           KHQA E E+ +    +  L      M    HFA+  I
Sbjct: 86  KHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETI 122



 Score = 28.9 bits (63), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 2/84 (2%)

Query: 221 FQFYAEVAEA-EVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSK 279
           FQF+   AE  E W++EK  I    ++ +D  ++   ++K ++ E E+ +    +  L +
Sbjct: 48  FQFFQRDAEELEKWIQEKLQIASDENY-KDPTNLQGKLQKHQAFEAEVQANSGAIVKLDE 106

Query: 280 LCQSLLDRNHFDSKNISKKQVNTH 303
               ++   HF S+ I  + +  H
Sbjct: 107 TGNLMISEGHFASETIRTRLMELH 130


>pdb|3EDV|A Chain A, Crystal Structure Of Repeats 14-16 Of Beta2-Spectrin
 pdb|3EDV|B Chain B, Crystal Structure Of Repeats 14-16 Of Beta2-Spectrin
          Length = 323

 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 38/201 (18%)

Query: 85  LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELAS-REPVVSALA 143
           L+Q  R+VDD  QW+ E+E +A S +LG     V  LQ++ +    +  +  +  V  + 
Sbjct: 8   LFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVN 67

Query: 144 SRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLES 203
             A ++  S H  AA I      L +  A            LL+ ++++   LA+ Y   
Sbjct: 68  HLADELINSGHSDAATIAEWKDGLNEAWAD-----------LLELIDTRTQILAASY--- 113

Query: 204 NLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESL 263
                           + +FY +  E    +++K   L   + GRD+++V       E+L
Sbjct: 114 ---------------ELHKFYHDAKEIFGRIQDKHKKL-PEELGRDQNTV-------ETL 150

Query: 264 ERELVSFQHTVGHLSKLCQSL 284
           +R   +F+H +  L    + L
Sbjct: 151 QRMHTTFEHDIQALGTQVRQL 171



 Score = 36.6 bits (83), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 30/190 (15%)

Query: 110 DLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARIEGATSALQ- 168
           +LG     V++LQ+ H   E +       + AL ++ +Q+   A    AR++ A +  + 
Sbjct: 139 ELGRDQNTVETLQRMHTTFEHD-------IQALGTQVRQLQEDA----ARLQAAYAGDKA 187

Query: 169 DKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVA 228
           D +    N        LLDA ES+ + L                    +   F+F++ V 
Sbjct: 188 DDIQKRENEVLEAWKSLLDACESRRVRLVD------------------TGDKFRFFSMVR 229

Query: 229 EAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRN 288
           +  +W+++    + + +  RD  SV  L+   + ++ E+ +   +     +L +SLL R 
Sbjct: 230 DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK 289

Query: 289 HFDSKNISKK 298
           H+ S+ I +K
Sbjct: 290 HYASEEIKEK 299


>pdb|2SPC|A Chain A, Crystal Structure Of The Repetitive Segments Of Spectrin
 pdb|2SPC|B Chain B, Crystal Structure Of The Repetitive Segments Of Spectrin
          Length = 107

 Score = 38.9 bits (89), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 48/100 (48%)

Query: 88  YLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAK 147
           Y+RD +    W+  +E    + D  N+   V++L KKH+  +  +   E  ++AL + A 
Sbjct: 8   YMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVAD 67

Query: 148 QMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLD 187
           Q+    H+A+  ++     + ++   L+     +R RL D
Sbjct: 68  QLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107



 Score = 35.8 bits (81), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 219 LIFQFYAEVAE-AEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHL 277
           L  Q Y    E AE W+  ++  L++ D      +V +LIKK E  ++ +   +  +  L
Sbjct: 3   LDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAAL 62

Query: 278 SKLCQSLLDRNHFDSKNISKKQ 299
             +   L+ +NH+ S  + +K+
Sbjct: 63  QTVADQLIAQNHYASNLVDEKR 84


>pdb|3F57|A Chain A, Crystal Structure Of Human Erythroid Beta Spectrin Repeats
           14 And 15 (Ankyrin Binding Domain)
 pdb|3F57|B Chain B, Crystal Structure Of Human Erythroid Beta Spectrin Repeats
           14 And 15 (Ankyrin Binding Domain)
          Length = 225

 Score = 37.7 bits (86), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 220 IFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSF-QHTVGHLS 278
           +FQ   E  + E W+ EK+ +  S + G+D D V  L  K     RE  +  Q  V +++
Sbjct: 10  LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 69

Query: 279 KLCQSLLDRNHFDSKNISK 297
              + L+D  H ++  I++
Sbjct: 70  AFIERLIDAGHSEAATIAE 88



 Score = 35.8 bits (81), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 18/126 (14%)

Query: 79  LEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQ--ALETELASRE 136
           LE+   L+Q  R+ DD  QW+ EKE +A S ++G     V  L+ K +  A ET    +E
Sbjct: 4   LENMYHLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQE 63

Query: 137 PV--VSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQML 194
            V  V+A   R   +  + H  AA I      L +  A            LL+ ++++M 
Sbjct: 64  RVDNVNAFIER---LIDAGHSEAATIAEWKDGLNEMWAD-----------LLELIDTRMQ 109

Query: 195 YLASGY 200
            LA+ Y
Sbjct: 110 LLAASY 115


>pdb|3EDU|A Chain A, Crystal Structure Of The Ankyrin-Binding Domain Of Human
           Erythroid Spectrin
          Length = 218

 Score = 37.7 bits (86), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 220 IFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSF-QHTVGHLS 278
           +FQ   E  + E W+ EK+ +  S + G+D D V  L  K     RE  +  Q  V +++
Sbjct: 3   LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62

Query: 279 KLCQSLLDRNHFDSKNISK 297
              + L+D  H ++  I++
Sbjct: 63  AFIERLIDAGHSEAATIAE 81



 Score = 34.3 bits (77), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 18/120 (15%)

Query: 85  LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQ--ALETELASREPV--VS 140
           L+Q  R+ DD  QW+ EKE +A S ++G     V  L+ K +  A ET    +E V  V+
Sbjct: 3   LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62

Query: 141 ALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGY 200
           A   R   +  + H  AA I      L +  A            LL+ ++++M  LA+ Y
Sbjct: 63  AFIER---LIDAGHSEAATIAEWKDGLNEMWAD-----------LLELIDTRMQLLAASY 108


>pdb|3PE0|A Chain A, Structure Of The Central Region Of The Plakin Domain Of
           Plectin
 pdb|3PE0|B Chain B, Structure Of The Central Region Of The Plakin Domain Of
           Plectin
          Length = 283

 Score = 36.2 bits (82), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 29/196 (14%)

Query: 85  LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALAS 144
           L+ ++     E+ WL EKE   V  D  +  T + + ++ + AL  EL  +E  +  L +
Sbjct: 10  LHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQN 69

Query: 145 RAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESN 204
              ++ R  H A   +E   +ALQ + + +        L+L   +E+ +           
Sbjct: 70  AGDRLLREDHPARPTVESFQAALQTQWSWM--------LQLCCCIEAHL----------- 110

Query: 205 LLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLE 264
                     K +   FQF+++V EAE  L++ +  L          +V  L   L+  +
Sbjct: 111 ----------KENAAYFQFFSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQ 160

Query: 265 RELVSFQHTVGHLSKL 280
            E        GHLS L
Sbjct: 161 DEKEQLNEYKGHLSGL 176


>pdb|2IAK|A Chain A, Crystal Structure Of A Protease Resistant Fragment Of The
           Plakin Domain Of Bullous Pemphigoid Antigen1 (Bpag1)
          Length = 224

 Score = 34.7 bits (78), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 40/84 (47%)

Query: 85  LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALAS 144
           L+ ++    +E+ WL EKE   V+ D     ++V   +  H  L  EL  +E  + A+  
Sbjct: 122 LHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQE 181

Query: 145 RAKQMSRSAHFAAARIEGATSALQ 168
            A+Q+    H A   IE   +A+Q
Sbjct: 182 IAEQLLLENHPARLTIEAYRAAMQ 205


>pdb|1HCI|A Chain A, Crystal Structure Of The Rod Domain Of Alpha-Actinin
 pdb|1HCI|B Chain B, Crystal Structure Of The Rod Domain Of Alpha-Actinin
          Length = 476

 Score = 33.9 bits (76), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 98  WLLEKEPLAVSTDLGN-SLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFA 156
           W   KE + +  D  + SLT V++L +KH+A E++LA+ +  V  +A+ A++++   +  
Sbjct: 146 WAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHD 205

Query: 157 AARIEGATSALQDKLASLRNAASVRR 182
           A  +      + D+   L      RR
Sbjct: 206 AVNVNDRCQKICDQWDRLGTLTQKRR 231


>pdb|1QUU|A Chain A, Crystal Structure Of Two Central Spectrin-Like Repeats
           From Alpha-Actinin
          Length = 250

 Score = 33.9 bits (76), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 98  WLLEKEPLAVSTDLGN-SLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFA 156
           W   KE + +  D  + SLT V++L +KH+A E++LA+ +  V  +A+ A++++   +  
Sbjct: 29  WAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHD 88

Query: 157 AARIEGATSALQDKLASLRNAASVRR 182
           A  +      + D+   L      RR
Sbjct: 89  AVNVNDRCQKICDQWDRLGTLTQKRR 114


>pdb|3PDY|A Chain A, Structure Of The Third And Fourth Spectrin Repeats Of The
           Plakin Domain Of Plectin
 pdb|3PDY|B Chain B, Structure Of The Third And Fourth Spectrin Repeats Of The
           Plakin Domain Of Plectin
          Length = 210

 Score = 33.1 bits (74), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 40/84 (47%)

Query: 85  LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALAS 144
           L+ ++     E+ WL EKE   V  D  +  T + + ++ + AL  EL  +E  +  L +
Sbjct: 107 LHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQN 166

Query: 145 RAKQMSRSAHFAAARIEGATSALQ 168
              ++ R  H A   +E   +ALQ
Sbjct: 167 AGDRLLREDHPARPTVESFQAALQ 190


>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
 pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
          Length = 1010

 Score = 33.1 bits (74), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 88  YLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALET--------ELASREPVV 139
           YL+  ++ +QW+ +K+    S D G+S+ +VQS    H+  +         E++  E + 
Sbjct: 771 YLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIY 830

Query: 140 SALASRAKQMSRSAHFAAA 158
           ++L ++ + + R    A A
Sbjct: 831 NSLQTKLRLIKREPFVAPA 849


>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
           Actinin
 pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
           Actinin
          Length = 863

 Score = 32.7 bits (73), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 7/72 (9%)

Query: 231 EVWLKEKKPILHSSDFGRDEDSVLS----LIKKLESLERELVSFQHTVGHLSKLCQSLLD 286
           E W   K+ +L   D+   E + LS    L+KK E+ E +L + Q  V  ++ + Q L +
Sbjct: 383 ESWTDGKEAMLQQKDY---ETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNE 439

Query: 287 RNHFDSKNISKK 298
            +++DS +++ +
Sbjct: 440 LDYYDSPSVNAR 451


>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
           Pre-power Stroke State
          Length = 995

 Score = 32.3 bits (72), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 88  YLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALET--------ELASREPVV 139
           YL+  ++ +QW+ +K+    S D G+S+ +VQS    H+  +         E++  E + 
Sbjct: 763 YLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIY 822

Query: 140 SALASRAKQMSRSAHFAAA 158
           ++L ++ + + R    A A
Sbjct: 823 NSLQTKLRLIKREPFVAPA 841


>pdb|2WJS|A Chain A, Crystal Structure Of The Lg1-3 Region Of The Laminin
           Alpha2 Chain
          Length = 608

 Score = 31.2 bits (69), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 31/67 (46%)

Query: 61  PFHRYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQS 120
           P   Y ++   M   R     ALL+Y   RD+ D M   L    + VS DLG+ +T+V S
Sbjct: 219 PIRWYPNISTVMFKFRTFSSSALLMYLATRDLKDFMSVELSDGHVKVSYDLGSGMTSVVS 278

Query: 121 LQKKHQA 127
            Q  +  
Sbjct: 279 NQNHNDG 285


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.131    0.365 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,603,070
Number of Sequences: 62578
Number of extensions: 267639
Number of successful extensions: 864
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 796
Number of HSP's gapped (non-prelim): 59
length of query: 303
length of database: 14,973,337
effective HSP length: 98
effective length of query: 205
effective length of database: 8,840,693
effective search space: 1812342065
effective search space used: 1812342065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)