Query psy10634
Match_columns 303
No_of_seqs 216 out of 1193
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 23:30:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10634.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10634hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r6n_A Desmoplakin; spectrin r 100.0 1.6E-40 5.6E-45 318.9 26.0 247 10-288 6-272 (450)
2 1u4q_A Spectrin alpha chain, b 100.0 4.7E-37 1.6E-41 283.2 33.8 257 17-302 14-299 (322)
3 3kbt_A Beta-I spectrin, spectr 100.0 9.5E-34 3.3E-38 261.6 28.1 261 12-302 9-301 (326)
4 3edv_A Spectrin beta chain, br 100.0 6.3E-33 2.2E-37 256.0 31.6 256 17-302 17-303 (323)
5 1cun_A Protein (alpha spectrin 100.0 7.8E-32 2.7E-36 234.3 26.5 189 85-302 2-190 (213)
6 3pe0_A Plectin; cytoskeleton, 100.0 3.1E-32 1.1E-36 247.8 17.8 185 78-291 3-190 (283)
7 1u5p_A Spectrin alpha chain, b 100.0 2.1E-29 7.2E-34 219.7 26.5 190 84-302 4-193 (216)
8 3edu_A Beta-I spectrin, spectr 100.0 2.8E-30 9.4E-35 226.2 20.9 188 85-302 3-192 (218)
9 1s35_A Beta-I spectrin, spectr 100.0 3.8E-29 1.3E-33 217.7 23.5 189 85-302 2-191 (214)
10 3fb2_A Spectrin alpha chain, b 100.0 6.7E-29 2.3E-33 217.3 23.4 193 81-302 11-203 (218)
11 1quu_A Human skeletal muscle a 100.0 4E-28 1.4E-32 216.8 23.7 205 73-300 6-218 (250)
12 1hci_A Alpha-actinin 2; triple 100.0 7.1E-27 2.4E-31 226.3 28.2 262 17-301 22-336 (476)
13 3pdy_A Plectin; cytoskeleton, 100.0 5.4E-28 1.8E-32 210.9 17.0 176 10-188 9-210 (210)
14 3kbt_A Beta-I spectrin, spectr 100.0 2E-26 6.7E-31 212.6 25.6 192 82-302 3-195 (326)
15 1u4q_A Spectrin alpha chain, b 100.0 3.5E-26 1.2E-30 210.4 26.7 190 84-302 4-193 (322)
16 3edv_A Spectrin beta chain, br 100.0 2.8E-26 9.5E-31 211.4 25.7 191 82-302 5-197 (323)
17 3lbx_B Beta-I spectrin, spectr 100.0 7.1E-27 2.4E-31 199.7 19.5 171 82-281 3-173 (185)
18 1hci_A Alpha-actinin 2; triple 99.9 5.6E-26 1.9E-30 220.0 25.7 248 17-286 142-434 (476)
19 3pdy_A Plectin; cytoskeleton, 99.9 2.5E-26 8.6E-31 200.3 18.0 179 89-302 11-189 (210)
20 2iak_A Bullous pemphigoid anti 99.9 1E-26 3.4E-31 204.6 12.3 170 15-187 29-224 (224)
21 1u5p_A Spectrin alpha chain, b 99.9 1.7E-25 5.7E-30 194.9 19.9 173 17-189 14-215 (216)
22 2iak_A Bullous pemphigoid anti 99.9 6.6E-26 2.2E-30 199.4 16.2 183 85-302 22-204 (224)
23 1sjj_A Actinin; 3-helix bundle 99.9 3E-25 1E-29 229.6 23.8 247 17-286 261-553 (863)
24 1cun_A Protein (alpha spectrin 99.9 1.7E-23 5.9E-28 181.5 21.6 178 12-189 5-212 (213)
25 1s35_A Beta-I spectrin, spectr 99.9 2.2E-23 7.6E-28 181.2 19.8 178 12-189 5-213 (214)
26 1sjj_A Actinin; 3-helix bundle 99.9 9.5E-23 3.2E-27 210.9 17.3 260 12-293 375-680 (863)
27 3lbx_A Spectrin alpha chain, e 99.9 4.3E-22 1.5E-26 166.5 14.3 133 56-189 29-161 (161)
28 3fb2_A Spectrin alpha chain, b 99.9 7.8E-22 2.7E-26 172.4 15.1 176 7-182 13-218 (218)
29 3r6n_A Desmoplakin; spectrin r 99.9 2.9E-21 1E-25 185.3 18.6 170 89-302 8-177 (450)
30 3f31_A Spectrin alpha chain, b 99.9 2.1E-21 7.2E-26 160.3 13.5 130 56-186 19-148 (149)
31 3edu_A Beta-I spectrin, spectr 99.9 1.7E-21 5.9E-26 170.1 13.4 175 17-192 12-217 (218)
32 1quu_A Human skeletal muscle a 99.8 2.7E-18 9.4E-23 152.9 16.4 185 9-193 16-246 (250)
33 2spc_A Spectrin; cytoskeleton; 99.7 7E-18 2.4E-22 131.1 6.2 105 82-186 2-106 (107)
34 3lbx_A Spectrin alpha chain, e 99.7 4.4E-17 1.5E-21 136.0 11.4 125 144-302 15-139 (161)
35 3f31_A Spectrin alpha chain, b 99.7 6.4E-17 2.2E-21 133.3 10.7 118 155-302 12-129 (149)
36 1g8x_A Myosin II heavy chain f 99.7 8.1E-16 2.8E-20 160.3 18.0 210 72-302 755-971 (1010)
37 3uul_A Utrophin; spectrin repe 99.7 1.9E-15 6.3E-20 118.8 15.0 110 84-193 3-116 (118)
38 3uun_A Dystrophin; triple heli 99.7 1.8E-15 6.2E-20 118.9 14.8 110 84-193 3-116 (119)
39 3lbx_B Beta-I spectrin, spectr 99.5 4.2E-14 1.4E-18 120.3 11.3 134 12-145 9-172 (185)
40 1g8x_A Myosin II heavy chain f 99.5 9.6E-15 3.3E-19 152.2 7.0 177 17-193 777-998 (1010)
41 2ycu_A Non muscle myosin 2C, a 99.5 6.6E-16 2.3E-20 161.0 -3.6 212 65-302 744-963 (995)
42 2odv_A Plectin 1, HD1; plakin 99.5 4.8E-13 1.6E-17 117.8 14.7 194 85-303 13-210 (235)
43 3pe0_A Plectin; cytoskeleton, 99.4 5.7E-13 1.9E-17 120.8 9.8 147 9-155 10-189 (283)
44 2spc_A Spectrin; cytoskeleton; 99.4 6.2E-14 2.1E-18 108.6 2.7 86 217-302 2-87 (107)
45 2ycu_A Non muscle myosin 2C, a 99.3 5.8E-14 2E-18 146.4 -4.8 177 17-193 769-990 (995)
46 2odv_A Plectin 1, HD1; plakin 99.3 3.3E-11 1.1E-15 106.1 11.6 164 17-183 22-225 (235)
47 3uul_A Utrophin; spectrin repe 99.1 3E-10 1E-14 88.7 11.1 84 219-302 3-90 (118)
48 3uun_A Dystrophin; triple heli 99.1 2.9E-10 9.9E-15 88.8 10.6 84 219-302 3-90 (119)
49 1wlx_A Alpha-actinin 4; three- 98.6 1.3E-06 4.6E-11 69.0 13.5 113 74-190 5-126 (129)
50 1wlx_A Alpha-actinin 4; three- 98.1 4.3E-05 1.5E-09 60.3 11.9 71 215-285 9-79 (129)
51 3t98_B Nucleoporin NUP58/NUP45 51.3 26 0.0009 25.5 5.0 21 223-243 17-37 (93)
52 3lay_A Zinc resistance-associa 39.5 1.2E+02 0.0041 24.6 7.8 53 249-301 69-121 (175)
53 3ghg_A Fibrinogen alpha chain; 36.5 1.2E+02 0.004 29.1 8.1 30 255-284 114-143 (562)
54 1g6u_A Domain swapped dimer; d 27.8 1E+02 0.0035 18.5 5.2 31 247-277 16-46 (48)
55 2pnv_A Small conductance calci 26.8 1.1E+02 0.0039 18.7 4.7 32 253-284 11-42 (43)
56 3lay_A Zinc resistance-associa 24.7 2.7E+02 0.0094 22.4 11.1 58 125-182 80-137 (175)
57 2lw1_A ABC transporter ATP-bin 24.1 1.9E+02 0.0065 20.3 8.8 58 223-280 27-85 (89)
58 1txp_A HnRNP C, heterogeneous 23.5 1E+02 0.0035 17.0 3.2 24 261-284 2-25 (28)
59 2l5g_B Putative uncharacterize 22.0 1.4E+02 0.0049 18.2 5.0 31 255-285 6-36 (42)
No 1
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=318.85 Aligned_cols=247 Identities=17% Similarity=0.222 Sum_probs=227.3
Q ss_pred chhhhHHHHhhchhhhhhhhcccccchHHHH--HHH--HHHHhhhhhcc-------------hhhhhhHHHHHHHHHHHH
Q psy10634 10 SNVAWQVRSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVDIFLMY-------------KTSCFFPFHRYRSLQEPM 72 (303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~~~~~~-------------~~~~~~l~~~~~~L~~~~ 72 (303)
+++....+++.||++++.+|.+.+||+||++ .++ |+.+...+... .+.+..|..+|..|++++
T Consensus 6 ~~~r~v~dl~~Wl~E~~~~L~S~d~GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~~~~~~~~L~~~y~~L~~~a 85 (450)
T 3r6n_A 6 FTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKAS 85 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhccHHHHHHHHHHHHHhcCccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHH
Confidence 4566778999999999999999999999966 666 66653222111 145678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhc
Q psy10634 73 QIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRS 152 (303)
Q Consensus 73 ~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~ 152 (303)
..|+++|+ .+++|+++|++++.||.++++.+.+.|||+++.++..++++|+.|+.+|.+|+++|+.|...|+.|+..
T Consensus 86 ~~Rr~~Le---~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~ 162 (450)
T 3r6n_A 86 FERMDHLR---QLQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLN 162 (450)
T ss_dssp HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHc
Confidence 99999998 489999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHh
Q psy10634 153 AHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEV 232 (303)
Q Consensus 153 ~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~ 232 (303)
+||+++.|++++++|+..|++|.+++.||+.+|+.+..+++ |+.||+++++
T Consensus 163 ~Hpas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~Q-----------------------------F~~Da~Eaes 213 (450)
T 3r6n_A 163 QHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQ-----------------------------FFEEAQSTEA 213 (450)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------------HHHHHHHHHH
Confidence 99999999999999999999999999999999999999888 9999999999
Q ss_pred HHHhhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q psy10634 233 WLKEKKPILHSS---DFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRN 288 (303)
Q Consensus 233 WL~e~~~~l~s~---~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~ 288 (303)
||.+++..+.++ ++|.|+.+++.|+++|++++++|..++.+|.+|..+|+.|+|..
T Consensus 214 WL~eke~~l~s~y~~D~g~d~~~~e~LLkkh~~le~~l~~~~~~I~~L~~qA~~l~~l~ 272 (450)
T 3r6n_A 214 YLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLK 272 (450)
T ss_dssp HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred HHHHHHHHhcccccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999875 88999999999999999999999999999999999999998754
No 2
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=100.00 E-value=4.7e-37 Score=283.17 Aligned_cols=257 Identities=30% Similarity=0.454 Sum_probs=237.2
Q ss_pred HHhhchhhhhhhhcccccchHHHH--HHH--HHHHhhh-----------------hhc------ch--hhhhhHHHHHHH
Q psy10634 17 RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVDI-----------------FLM------YK--TSCFFPFHRYRS 67 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~~-----------------~~~------~~--~~~~~l~~~~~~ 67 (303)
++..||+++...|.+.+||+++.+ .++ |+.+... +.. .. .++..|..+|..
T Consensus 14 ~l~~Wl~~~e~~l~~~~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~~w~~ 93 (322)
T 1u4q_A 14 DFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQR 93 (322)
T ss_dssp HHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCSSCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHH
Confidence 567899999999999999999855 555 4433111 110 00 457789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Q psy10634 68 LQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAK 147 (303)
Q Consensus 68 L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~ 147 (303)
|+.++..|+.+|+.++.+++|.+++.++..||.++++.+.+.++|+++..|+.++++|+.|+.+|.++++.|..|...|+
T Consensus 94 L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~~h~~l~~el~~~~~~i~~l~~~g~ 173 (322)
T 1u4q_A 94 IKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGK 173 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHH
Q psy10634 148 QMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEV 227 (303)
Q Consensus 148 ~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~ 227 (303)
.|+..+||+++.|+.++..|+.+|..|...+.+|+.+|+.++.+++ |+.++
T Consensus 174 ~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~~~q-----------------------------f~~~~ 224 (322)
T 1u4q_A 174 KLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQ-----------------------------FVANV 224 (322)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHH
Confidence 9999999999999999999999999999999999999999998777 99999
Q ss_pred HHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 228 AEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 228 ~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
+++..||.+++..+.++++|.|+++++.++++|+.|+.++..+...|..|...|+.|++.+||+++.|..++..|
T Consensus 225 ~~~~~Wl~~~e~~l~~~~~g~~~~~~~~ll~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l 299 (322)
T 1u4q_A 225 EEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGL 299 (322)
T ss_dssp HHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998765
No 3
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=100.00 E-value=9.5e-34 Score=261.63 Aligned_cols=261 Identities=20% Similarity=0.215 Sum_probs=213.7
Q ss_pred hhhHH-HHhhchhhhhhhhcccccchHHHH--HHH--HHHHhhhh-----------------hc----c--h--hhhhhH
Q psy10634 12 VAWQV-RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVDIF-----------------LM----Y--K--TSCFFP 61 (303)
Q Consensus 12 ~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~~~-----------------~~----~--~--~~~~~l 61 (303)
|.++. ++.+||.+++..|.+.+||+|+.+ .++ |+.+...+ .. + . .++..|
T Consensus 9 f~~~~~el~~Wl~e~~~~l~~~~~g~d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~l 88 (326)
T 3kbt_A 9 YYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEGEQIIRLQGQV 88 (326)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHH
Confidence 44444 677999999999999999999744 444 43321111 00 0 0 467789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhc-hHHHHH
Q psy10634 62 FHRYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELAS-REPVVS 140 (303)
Q Consensus 62 ~~~~~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~-~~~~v~ 140 (303)
..+|..|+..+..|+.+|+.++.+++|.++|+++..||.+++..+.+.++|+++..|+.++++|+.|+.++.+ ++++|.
T Consensus 89 ~~~w~~L~~~~~~R~~~Le~~l~l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~d~~~v~~l~~~~~~f~~el~~~~~~~v~ 168 (326)
T 3kbt_A 89 DKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVD 168 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 9999999999999999999999999999999999999999999998899999999999999999999999998 799999
Q ss_pred HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhH
Q psy10634 141 ALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLI 220 (303)
Q Consensus 141 ~l~~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~ 220 (303)
.|+..|+.|+..+||+++.|+.+++.|+.+|..|..++.+|...|..+..+++
T Consensus 169 ~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~~~~--------------------------- 221 (326)
T 3kbt_A 169 NVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHR--------------------------- 221 (326)
T ss_dssp HHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999988777
Q ss_pred HHHHHHHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-ChhHHHHHh
Q psy10634 221 FQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHF-DSKNISKKQ 299 (303)
Q Consensus 221 ~qF~~d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~-~~~~I~~~~ 299 (303)
|+.+++++..||.+++..|. .++|.|+.+++.++++|+.|+.+|..++.+|..|...|..|...+++ +++.|..++
T Consensus 222 --f~~~~~e~~~Wl~ek~~~L~-~~~~~d~~~~~~ll~~~~~~e~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~ 298 (326)
T 3kbt_A 222 --YFYTGAEILGLIDEKHRELP-EDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKE 298 (326)
T ss_dssp --HHHHHHHHHHHHHHHHHC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHhhCc-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHH
Confidence 99999999999999999884 67899999999999999999999999999999999999999987665 578999888
Q ss_pred hhc
Q psy10634 300 VNT 302 (303)
Q Consensus 300 ~~~ 302 (303)
..|
T Consensus 299 ~~l 301 (326)
T 3kbt_A 299 QEV 301 (326)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 4
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.3e-33 Score=255.97 Aligned_cols=256 Identities=19% Similarity=0.228 Sum_probs=230.5
Q ss_pred HHhhchhhhhhhhcccccchHHHH--HHH--HHHHhhhhh------------------------cch--hhhhhHHHHHH
Q psy10634 17 RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVDIFL------------------------MYK--TSCFFPFHRYR 66 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~~~~------------------------~~~--~~~~~l~~~~~ 66 (303)
++..||.++...+.+.+||.++.. .++ |+.+...+. ... ..+..|+.+|.
T Consensus 17 ~l~~Wl~~~e~~l~~~~~g~dl~~v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~ 96 (323)
T 3edv_A 17 DLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWA 96 (323)
T ss_dssp HHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Confidence 567999999999999999999733 333 222211110 000 56778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Q psy10634 67 SLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRA 146 (303)
Q Consensus 67 ~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g 146 (303)
.|...+..|+..|+.+..+++|.++|+++..||.+++..+. .|+|.|+..|+.++++|+.|+.+|.++++.|+.|...|
T Consensus 97 ~L~~~~~~R~~~L~~a~~~~~f~~~~~e~~~Wl~~k~~~l~-~~~~~d~~~v~~l~~~h~~~~~~l~~~~~~v~~l~~~a 175 (323)
T 3edv_A 97 DLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDA 175 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-CCCCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988774 78999999999999999999999999999999999999
Q ss_pred HHHhhcCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHH
Q psy10634 147 KQMSRSAHF-AAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYA 225 (303)
Q Consensus 147 ~~L~~~~h~-~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~ 225 (303)
.+|+...++ .++.|+.++..|+.+|..|+..+.+|+..|+.+..+++ |+.
T Consensus 176 ~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~~~~-----------------------------F~~ 226 (323)
T 3edv_A 176 ARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFR-----------------------------FFS 226 (323)
T ss_dssp HHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHH
T ss_pred HHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHH
Confidence 999987665 57899999999999999999999999999999998766 999
Q ss_pred HHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 226 EVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 226 d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
+++++..||.+++..+.+.++|.|+.+++.++++|+.|+.+|..++..+..+...|+.|+..+||++++|..++..|
T Consensus 227 ~~~~l~~Wl~~~~~~l~~~~~~~d~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~Ll~~~~~~~~~i~~~l~~L 303 (323)
T 3edv_A 227 MVRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQL 303 (323)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998765
No 5
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=100.00 E-value=7.8e-32 Score=234.26 Aligned_cols=189 Identities=33% Similarity=0.542 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHHHHHH
Q psy10634 85 LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARIEGAT 164 (303)
Q Consensus 85 l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~~~~ 164 (303)
+++|.+++++++.||.++++.+.+.++|+|+.+|+.++++|+.|+.+|.++++.|..+...|+.|+..+||+++.|..++
T Consensus 2 l~qf~~~~~~~~~Wl~e~e~~l~~~~~g~dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~i~~~~ 81 (213)
T 1cun_A 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRL 81 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred hHHHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcCC
Q psy10634 165 SALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSS 244 (303)
Q Consensus 165 ~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s~ 244 (303)
..|+.+|..|...+.+|..+|+.++.+++ |+.+++++..||.+++..+.++
T Consensus 82 ~~l~~~w~~L~~~~~~R~~~Le~~~~~~~-----------------------------f~~~~~e~~~Wl~~~e~~l~~~ 132 (213)
T 1cun_A 82 AQFVDHWKELKQLAAARGQRLEESLEYQQ-----------------------------FVANVEEEEAWINEKMTLVASE 132 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999998777 9999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 245 DFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 245 ~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
++|+|+++++.++++|+.|+.++..+..+|..|...|+.|++.+||+++.|..++..|
T Consensus 133 ~~g~~~~~v~~ll~~h~~~~~el~~~~~~i~~l~~~~~~L~~~~~~~~~~I~~~~~~l 190 (213)
T 1cun_A 133 DYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGL 190 (213)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998765
No 6
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=100.00 E-value=3.1e-32 Score=247.81 Aligned_cols=185 Identities=20% Similarity=0.244 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCCh
Q psy10634 78 NLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAA 157 (303)
Q Consensus 78 ~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~ 157 (303)
+|..+..|++|+++|++++.||.++++.....|||+.+.++..++++|+.|++||.+|+++|+.|.+.|++|+..+||++
T Consensus 3 rL~~l~~L~qF~~d~~~e~~Wi~Eke~~~~~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~hp~~ 82 (283)
T 3pe0_A 3 HMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPAR 82 (283)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCh
Confidence 46667789999999999999999999999999999988789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHH--
Q psy10634 158 ARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLK-- 235 (303)
Q Consensus 158 ~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~-- 235 (303)
+.|++++++|+..|++|.+++.+|+.+|+++..+++ |+.||+++++||.
T Consensus 83 ~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~q-----------------------------F~~da~e~e~Wl~~~ 133 (283)
T 3pe0_A 83 PTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQ-----------------------------FFSDVREAEGQLQKL 133 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887 9999999999887
Q ss_pred -hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC
Q psy10634 236 -EKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFD 291 (303)
Q Consensus 236 -e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~ 291 (303)
++...+.++++|.|+.+++.|+++|++|+.+|..++.+|..|..+|+.|++.+++.
T Consensus 134 ~e~~~~~~s~d~g~d~~s~~~LLkkh~~le~~l~~~~~~i~~L~~~a~~l~~l~~r~ 190 (283)
T 3pe0_A 134 QEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRH 190 (283)
T ss_dssp HHHHHHHHHSCCCSHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGS
T ss_pred HHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Confidence 77788899999999999999999999999999999999999999999999877654
No 7
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.97 E-value=2.1e-29 Score=219.66 Aligned_cols=190 Identities=27% Similarity=0.463 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHHHHH
Q psy10634 84 LLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARIEGA 163 (303)
Q Consensus 84 ~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~~~ 163 (303)
...+|.+++.++..||.+++..+.+.++|.|+..|+.++++|+.|+.+|.++++.|..+...|+.|+..+|++++.|..+
T Consensus 4 ~~~~F~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~ 83 (216)
T 1u5p_A 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDK 83 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcC
Q psy10634 164 TSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHS 243 (303)
Q Consensus 164 ~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s 243 (303)
+..|+.+|..|...+..|+..|+.++.+++ |+.+++++..||.+++..+.+
T Consensus 84 ~~~l~~~w~~L~~~~~~R~~~Le~~~~l~q-----------------------------f~~~~~~~~~Wl~e~e~~~~~ 134 (216)
T 1u5p_A 84 RETINGRFQRIKSMAAARRAKLNESHRLHQ-----------------------------FFRDMDDEESWIKEKKLLVSS 134 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHhHHHHHHHHhcC
Confidence 999999999999999999999999998877 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 244 SDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 244 ~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
+++|+|+.+++.++++|+.|+.+|..++.+|..+...|+.|++.+||+++.|..++..|
T Consensus 135 ~~~g~dl~~v~~ll~kh~~~~~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~~~~l 193 (216)
T 1u5p_A 135 EDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQF 193 (216)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCSHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988765
No 8
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.97 E-value=2.8e-30 Score=226.19 Aligned_cols=188 Identities=23% Similarity=0.297 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHhhcCCCChHHHHHH
Q psy10634 85 LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELAS-REPVVSALASRAKQMSRSAHFAAARIEGA 163 (303)
Q Consensus 85 l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~-~~~~v~~l~~~g~~L~~~~h~~~~~I~~~ 163 (303)
|++|+++|++++.||.+++..+.+.++|+|+.+|+.++++|+.|+.++.+ ++++|..|+..|+.|+..+||+++.|+.+
T Consensus 3 L~~f~~~~~~l~~Wl~~ke~~l~~~~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~ 82 (218)
T 3edu_A 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEW 82 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 79999999999999999999999999999999999999999999999998 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcC
Q psy10634 164 TSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHS 243 (303)
Q Consensus 164 ~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s 243 (303)
++.|+.+|..|..++.+|+..|..+..+++ |+.+++++..||.+++..+.
T Consensus 83 ~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~-----------------------------F~~~~~e~~~Wl~ek~~~l~- 132 (218)
T 3edu_A 83 KDGLNEMWADLLELIDTRMQLLAASYDLHR-----------------------------YFYTGAEILGLIDEKHRELP- 132 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHhhCC-
Confidence 999999999999999999999999988777 99999999999999999994
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-ChhHHHHHhhhc
Q psy10634 244 SDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHF-DSKNISKKQVNT 302 (303)
Q Consensus 244 ~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~-~~~~I~~~~~~~ 302 (303)
.++|.|+.+++.++++|+.|+.+|..++.+|.+|...|..|++.+++ +++.|..++..|
T Consensus 133 ~~~g~dl~~v~~l~~~h~~~e~dL~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~l 192 (218)
T 3edu_A 133 EDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEV 192 (218)
T ss_dssp -------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999988764 688999987764
No 9
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.97 E-value=3.8e-29 Score=217.73 Aligned_cols=189 Identities=17% Similarity=0.188 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCC-CChHHHHHH
Q psy10634 85 LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAH-FAAARIEGA 163 (303)
Q Consensus 85 l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h-~~~~~I~~~ 163 (303)
+++|.+++.+++.||.++++.+.+.++|.|+.+|+.++++|+.|+.+|.++++.|..+...|..|+..++ |+++.|+.+
T Consensus 2 ~q~F~~~~~~l~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~ 81 (214)
T 1s35_A 2 EQAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQR 81 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999999864 578999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcC
Q psy10634 164 TSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHS 243 (303)
Q Consensus 164 ~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s 243 (303)
+..|+..|..|...+..|+..|+.++.+++ |..+++++..||.+++..+.+
T Consensus 82 l~~L~~~w~~L~~~~~~r~~~L~~~l~l~~-----------------------------F~~~~~~~~~Wl~~~E~~l~~ 132 (214)
T 1s35_A 82 LEGLDTGWDALGRMWESRSHTLAQCLGFQE-----------------------------FQKDAKQAEAILSNQEYTLAH 132 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998777 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 244 SDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 244 ~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
.++|+|+.+++.++++|+.|+.++.++..+|..|...|+.|+..+||+++.|..++..|
T Consensus 133 ~~~g~~~~~v~~llkkh~~f~~~l~~~~~~i~~l~~~a~~L~~~~h~~~~~I~~~~~~l 191 (214)
T 1s35_A 133 LEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLI 191 (214)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998765
No 10
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.97 E-value=6.7e-29 Score=217.35 Aligned_cols=193 Identities=27% Similarity=0.439 Sum_probs=168.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHH
Q psy10634 81 DALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARI 160 (303)
Q Consensus 81 ~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I 160 (303)
.+..+++|++++.++..||.+++..+.+.++|.|+..++.++++|+.|+.+|.++.+.|..+...|+.|+..+||+++.|
T Consensus 11 ~~~~~~~F~~~~~~l~~Wl~~~~~~l~~~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~~~~~i 90 (218)
T 3fb2_A 11 DSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEI 90 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCTTHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCchHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhh
Q psy10634 161 EGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPI 240 (303)
Q Consensus 161 ~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~ 240 (303)
+.++..|+..|..|...+..|+..|+.++.+++ |..+++++..||.+++..
T Consensus 91 ~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~l~~-----------------------------F~~d~~~~~~WL~~~e~~ 141 (218)
T 3fb2_A 91 KQKLDILDQERADLEKAWVQRRMMLDQCLELQL-----------------------------FHRDCEQAENWMAAREAF 141 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998876 999999999999999999
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 241 LHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 241 l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
+.+.++|++++.++.++++|+.|+.++.....+|..|...|..|+..+||+++.|..++..|
T Consensus 142 L~~~~~g~s~~~ve~ll~~h~~f~~~l~~~~~~v~~l~~~~~~L~~~~h~~~~~I~~~~~~l 203 (218)
T 3fb2_A 142 LNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEV 203 (218)
T ss_dssp C-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 99989999999999999999999999999999999999999999999999999999998765
No 11
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.96 E-value=4e-28 Score=216.81 Aligned_cols=205 Identities=18% Similarity=0.240 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCC-CCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhh
Q psy10634 73 QIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDL-GNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSR 151 (303)
Q Consensus 73 ~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~-g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~ 151 (303)
-.|..+|+.. +++|.+++.++..||.++++.+.+.++ |+|+..|+.++++|+.|+.++.+++++|..|...|+.|+.
T Consensus 6 ~~R~~kLe~l--~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~ 83 (250)
T 1quu_A 6 IRRLERLEHL--AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNE 83 (250)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3588888885 799999999999999999999998999 9999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHH
Q psy10634 152 SAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAE 231 (303)
Q Consensus 152 ~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~ 231 (303)
.+||+++.|..+++.|+.+|..|..++..|+..|.+++.+++ .+...+.+|+.+++++.
T Consensus 84 ~~~~~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~---------------------~~d~l~~qF~~~a~~~~ 142 (250)
T 1quu_A 84 LDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLE---------------------TIDQLHLEFAKRAAPFN 142 (250)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHH
T ss_pred ccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHhHHHH
Confidence 999999999999999999999999999999999999999886 55555668999999999
Q ss_pred hHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhhhcCCC----ChhHHHHHhh
Q psy10634 232 VWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQ---HTVGHLSKLCQSLLDRNHF----DSKNISKKQV 300 (303)
Q Consensus 232 ~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~---~~v~~L~~~~~~L~~~~~~----~~~~I~~~~~ 300 (303)
.||.+++..+.++++|+|+++++.++++|+.|+.++...+ ..|..+...++.+++.+++ +.+.|..++.
T Consensus 143 ~Wl~~~e~~l~~~~~~~d~e~v~~ll~~h~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 218 (250)
T 1quu_A 143 NWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMD 218 (250)
T ss_dssp HHHHHHHTTTTCCCCCCSTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHH
T ss_pred HHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHH
Confidence 9999999999999999999999999999999996665554 6677777888888887764 4555544443
No 12
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.96 E-value=7.1e-27 Score=226.28 Aligned_cols=262 Identities=17% Similarity=0.181 Sum_probs=220.2
Q ss_pred HHhhchhhhhhhhcccccchHHHH--HHH---------HH--HHh-------hhhh--------------cc-hhhhhhH
Q psy10634 17 RSVHSLDGVSHIVYSVVLGKTIMT--KLL---------HK--LVV-------DIFL--------------MY-KTSCFFP 61 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~g~~l~~--~ll---------~~--~~~-------~~~~--------------~~-~~~~~~l 61 (303)
+++.||+++...+.+.+||.++.+ .++ ++ .+. ..+. .. ......+
T Consensus 22 ~ll~Wi~~~~~~l~~~~~~~~l~~~~~~l~~f~~~~~~~~p~~~~ek~~le~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 101 (476)
T 1hci_A 22 ELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISNRPAFMPSEGKMVSDI 101 (476)
T ss_dssp HHHTHHHHHHHHTTCCCCCSSSTTTTHHHHHHHHHHHHTHHHHHHHHHHTTTHHHHTTTTTTTTTSCCCCCCGGGCSSSH
T ss_pred HHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHH
Confidence 678999999999999999998633 222 11 000 1100 00 1234567
Q ss_pred HHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCC-CCCHHHHHHHHHHHHHHHH
Q psy10634 62 FHRYRSLQEPM----------QIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDL-GNSLTAVQSLQKKHQALET 130 (303)
Q Consensus 62 ~~~~~~L~~~~----------~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~-g~~l~~v~~l~~~h~~~~~ 130 (303)
...|..|..+. ..|+.+|+.+ +.+|.+++..+..||.+++..+.+.++ |.++..|+.++++|+.|+.
T Consensus 102 ~~~w~~L~~l~~~r~~~l~~~~~R~~~Le~~--~~~f~~~~~~~~~Wl~e~e~~l~~~~~~g~dl~~v~~ll~kh~~~~~ 179 (476)
T 1hci_A 102 AGAWQRLEQAEKGYEEWLLNEIRRLERLEHL--AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFES 179 (476)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHTTHHHHHHCCGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhcCCccCCCHHHHHHHHHHHHHHHH
Confidence 77777776654 5677777775 789999999999999999999988888 9999999999999999999
Q ss_pred HHhchHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchh
Q psy10634 131 ELASREPVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMS 210 (303)
Q Consensus 131 el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~ 210 (303)
+|.+++++|..|...|+.|+..+||+++.|..++..|+.+|..|..++..|+..|..++.+++
T Consensus 180 ~l~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~----------------- 242 (476)
T 1hci_A 180 DLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLE----------------- 242 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
T ss_pred HHHHhHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 999999999999999999999999999999999999999999999999999999999998876
Q ss_pred hhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhhc
Q psy10634 211 LWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHL---SKLCQSLLDR 287 (303)
Q Consensus 211 ~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L---~~~~~~L~~~ 287 (303)
.+...+.+|..+++++..||.+++..+.++++|+|+++++.++++|+.|+.++..+...+..+ ...++.|+..
T Consensus 243 ----~~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~ 318 (476)
T 1hci_A 243 ----TIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQS 318 (476)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445555679999999999999999999999999999999999999999999999988776666 7788999998
Q ss_pred CCC----ChhHHHHHhhh
Q psy10634 288 NHF----DSKNISKKQVN 301 (303)
Q Consensus 288 ~~~----~~~~I~~~~~~ 301 (303)
+|+ +++.|..++..
T Consensus 319 ~~~~~~~~~~~i~~~~~~ 336 (476)
T 1hci_A 319 YNIRISSSNPYSTVTMDE 336 (476)
T ss_dssp TTCCSCSCCTTCSSCHHH
T ss_pred cCCCcCCCCcchhccHHH
Confidence 886 56666555443
No 13
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.96 E-value=5.4e-28 Score=210.88 Aligned_cols=176 Identities=20% Similarity=0.221 Sum_probs=155.9
Q ss_pred chhhhHHHHhhchhhhhhhhcccccchHHHH--HHH--HHHHhhhhhcc----------------------hhhhhhHHH
Q psy10634 10 SNVAWQVRSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVDIFLMY----------------------KTSCFFPFH 63 (303)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~~~~~~----------------------~~~~~~l~~ 63 (303)
.++.-..++..||.+++..+.+.+||+|+.+ .++ |+.+...+... .+++..|..
T Consensus 9 ~~~r~~~dl~~Wl~e~~~~l~s~d~G~Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~i~~rl~~l~~ 88 (210)
T 3pdy_A 9 STLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPATRGAYRDCLGRLDL 88 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHHH
Confidence 3456667999999999999999999999865 555 54442211100 045678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Q psy10634 64 RYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALA 143 (303)
Q Consensus 64 ~~~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~ 143 (303)
+|..|+..+..|+.+|+ .+++|+++|++++.||.+++..+.+.+||+++.+++.++++|+.|+.+|.+++++|+.|+
T Consensus 89 ~~~~L~~~a~~R~~~L~---~L~~f~~~~~~~~~Wl~eke~~~~s~d~g~~~~~v~~l~~k~~~f~~el~~~~~~v~~l~ 165 (210)
T 3pdy_A 89 QYAKLLNSSKARLRSLE---SLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQ 165 (210)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHSCCSTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHccccCCCchhHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 144 SRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDA 188 (303)
Q Consensus 144 ~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a 188 (303)
..|+.|+..+||+++.|+++++.|+.+|++|.+++.||+.||+++
T Consensus 166 ~~~~~Ll~~~h~~~~~I~~~~~~l~~~W~~L~~L~~~~e~hLk~~ 210 (210)
T 3pdy_A 166 NAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKEN 210 (210)
T ss_dssp HHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999764
No 14
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.95 E-value=2e-26 Score=212.58 Aligned_cols=192 Identities=22% Similarity=0.318 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHHH
Q psy10634 82 ALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARIE 161 (303)
Q Consensus 82 ~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~ 161 (303)
+..+++|+.+++++.+||.+++..+.+.++|.|+.+++.++++|+.|+.+|.++.+.|..+...|+.|+..+||+++.|.
T Consensus 3 ~~~~qqf~~~~~el~~Wl~e~~~~l~~~~~g~d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~ 82 (326)
T 3kbt_A 3 ANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEGEQII 82 (326)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHTTSCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhh
Q psy10634 162 GATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPIL 241 (303)
Q Consensus 162 ~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l 241 (303)
.++..|+.+|..|..++..|+..|+.++.+++ |+.+++++..||.+++..+
T Consensus 83 ~~l~~l~~~w~~L~~~~~~R~~~Le~~l~l~~-----------------------------f~~~~~~l~~Wl~~~e~~l 133 (326)
T 3kbt_A 83 RLQGQVDKHYAGLKDVAEERKRKLENMYHLFQ-----------------------------LKRETDDLEQWISEKELVA 133 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998776 9999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 242 HSSDFGRDEDSVLSLIKKLESLERELVS-FQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 242 ~s~~~g~d~~~~~~ll~~h~~le~el~~-~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
.++++|.|+..++.++++|+.|+.++.. ...+|..++..|..|+..+||+++.|..+++.|
T Consensus 134 ~~~~~g~d~~~v~~l~~~~~~f~~el~~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l 195 (326)
T 3kbt_A 134 SSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGL 195 (326)
T ss_dssp HCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999998 689999999999999999999999999988765
No 15
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.95 E-value=3.5e-26 Score=210.36 Aligned_cols=190 Identities=27% Similarity=0.463 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHHHHH
Q psy10634 84 LLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARIEGA 163 (303)
Q Consensus 84 ~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~~~ 163 (303)
....|.+.+.++..||.+++..+.+.++|.++.+|+.++++|+.|+.+|.++++.|..+...|+.|+..+|++++.|..+
T Consensus 4 ~~~~F~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~ 83 (322)
T 1u4q_A 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDK 83 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCSSCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCChHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcC
Q psy10634 164 TSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHS 243 (303)
Q Consensus 164 ~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s 243 (303)
+..|+.+|..|...+..|+..|+.++.+++ |+.+++++..||.+++..+.+
T Consensus 84 ~~~l~~~w~~L~~~~~~R~~~Le~~~~l~~-----------------------------f~~~~~~~~~Wl~e~e~~~~~ 134 (322)
T 1u4q_A 84 RETINGRFQRIKSMAAARRAKLNESHRLHQ-----------------------------FFRDMDDEESWIKEKKLLVSS 134 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999998777 999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 244 SDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 244 ~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
+++|+|+..++.++++|+.|+.+|..+...|..+...|+.|++.+||+++.|..++..|
T Consensus 135 ~~~g~dl~~v~~ll~~h~~l~~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~l~~L 193 (322)
T 1u4q_A 135 EDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQF 193 (322)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998765
No 16
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.95 E-value=2.8e-26 Score=211.43 Aligned_cols=191 Identities=24% Similarity=0.340 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHhhcCCCChHHH
Q psy10634 82 ALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELAS-REPVVSALASRAKQMSRSAHFAAARI 160 (303)
Q Consensus 82 ~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~-~~~~v~~l~~~g~~L~~~~h~~~~~I 160 (303)
.+.|++|.++|+++..||.+++..+.+.++|.++.+|+.++++|+.|+.++.+ ++++|..|+..|+.|+..+||+++.|
T Consensus 5 ~~~l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i 84 (323)
T 3edv_A 5 RHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATI 84 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCChHHH
Confidence 34689999999999999999999999999999999999999999999999998 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhh
Q psy10634 161 EGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPI 240 (303)
Q Consensus 161 ~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~ 240 (303)
..+++.|+.+|..|..++..|...|..+..+++ |+.+++++..||.+++..
T Consensus 85 ~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~-----------------------------f~~~~~e~~~Wl~~k~~~ 135 (323)
T 3edv_A 85 AEWKDGLNEAWADLLELIDTRTQILAASYELHK-----------------------------FYHDAKEIFGRIQDKHKK 135 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999988777 999999999999999998
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-ChhHHHHHhhhc
Q psy10634 241 LHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHF-DSKNISKKQVNT 302 (303)
Q Consensus 241 l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~-~~~~I~~~~~~~ 302 (303)
+. .++|.|+.+++.++++|+.|+.+|..++..|..|...|..|+..+++ +++.|..++..|
T Consensus 136 l~-~~~~~d~~~v~~l~~~h~~~~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l 197 (323)
T 3edv_A 136 LP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEV 197 (323)
T ss_dssp CC-CCCCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred cc-cccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHH
Confidence 85 67899999999999999999999999999999999999999988765 578899887765
No 17
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.95 E-value=7.1e-27 Score=199.74 Aligned_cols=171 Identities=24% Similarity=0.338 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHHH
Q psy10634 82 ALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARIE 161 (303)
Q Consensus 82 ~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~ 161 (303)
+..+++|+++|++++.||.+++..+.+.++|.|+..++.++++|+.|+.+|.++++.|+.+...|++|+..+||+++.|+
T Consensus 3 ~~dl~~F~~~~~dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~~~~~i~ 82 (185)
T 3lbx_B 3 TADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQASEEIR 82 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhh
Q psy10634 162 GATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPIL 241 (303)
Q Consensus 162 ~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l 241 (303)
.++..|+..|..|.+.+.+|+.+|+.++.+++ |+.+++++..||..++..|
T Consensus 83 ~~l~~L~~~w~~L~~~w~~r~~~L~~~l~l~~-----------------------------F~~d~~~~~~Wl~~~e~~L 133 (185)
T 3lbx_B 83 EKLQQVMSRRKEMNEKWEARWERLRMLLEVCQ-----------------------------FSRDASVAEAWLIAQEPYL 133 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHhHHHHHHHHHHhHhhh
Confidence 99999999999999999999999999998777 9999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 242 HSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLC 281 (303)
Q Consensus 242 ~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~ 281 (303)
.++++|.++++++.++++|++|++++.+++++|.+|...+
T Consensus 134 ~~~~~g~sl~~ve~LlkkH~~fe~~l~~~~e~i~~L~~~t 173 (185)
T 3lbx_B 134 ASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPT 173 (185)
T ss_dssp HCCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHSCC
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhH
Confidence 9999999999999999999999999999999999998643
No 18
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.95 E-value=5.6e-26 Score=219.98 Aligned_cols=248 Identities=15% Similarity=0.212 Sum_probs=213.3
Q ss_pred HHhhchhhhhhhhccccc-chHHHH--HHH--HHHHhhhh-----------------------hcch--hhhhhHHHHHH
Q psy10634 17 RSVHSLDGVSHIVYSVVL-GKTIMT--KLL--HKLVVDIF-----------------------LMYK--TSCFFPFHRYR 66 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~-g~~l~~--~ll--~~~~~~~~-----------------------~~~~--~~~~~l~~~~~ 66 (303)
....||.++...+.+.+| |.++.+ .++ |+.+...+ .... .++..|..+|.
T Consensus 142 ~~~~Wl~e~e~~l~~~~~~g~dl~~v~~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~ 221 (476)
T 1hci_A 142 THETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWD 221 (476)
T ss_dssp HHHHHHTTHHHHHHCCGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHH
Confidence 556999999999999999 999744 344 33321111 0001 56788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHH
Q psy10634 67 SLQEPMQIRRDNLEDALLLY--------QYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPV 138 (303)
Q Consensus 67 ~L~~~~~~R~~~Le~~~~l~--------~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~ 138 (303)
.|...+..|+.+|+.+..++ +|..++.++..||.+++..+.+.++|.|+.+++.++++|+.|+.++..++..
T Consensus 222 ~L~~~~~~R~~~L~~~~~~~~~~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~~l~~~~~~ 301 (476)
T 1hci_A 222 RLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGE 301 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998766 7999999999999999999998899999999999999999999999999988
Q ss_pred HHHH---HHHHHHHhhcCCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhh
Q psy10634 139 VSAL---ASRAKQMSRSAHF----AAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSL 211 (303)
Q Consensus 139 v~~l---~~~g~~L~~~~h~----~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~ 211 (303)
+..+ ...|+.|+..+|+ +++.|..++..|+.+|..|..++..|...|+.++..++
T Consensus 302 ~~~~~~l~~~~~~l~~~~~~~~~~~~~~i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~~~~------------------ 363 (476)
T 1hci_A 302 RQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQH------------------ 363 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCSCSCCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCcCCCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------
Confidence 7776 7889999999987 68899999999999999999999999999999998654
Q ss_pred hhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy10634 212 WKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLD 286 (303)
Q Consensus 212 w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~ 286 (303)
++...+.+|+.+++++..||.+++..+.++++|. +.+++.++++|+.|+.+|..++..|..|...++.+..
T Consensus 364 ---~~~~L~~~F~~~a~~~~~Wl~e~e~~l~~~~~~~-~~~le~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~ 434 (476)
T 1hci_A 364 ---ANERLRRQFAAQANAIGPWIQNKMEEIARSSIQI-TGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQE 434 (476)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTT-TTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC-CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3333445799999999999999999999877775 6788889999999999999999999999988887654
No 19
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.94 E-value=2.5e-26 Score=200.30 Aligned_cols=179 Identities=20% Similarity=0.255 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHH
Q psy10634 89 LRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARIEGATSALQ 168 (303)
Q Consensus 89 ~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~~~~~~L~ 168 (303)
+++++++..||.++...+.+.|+|+|+.+|+.++++|+.|+.+|.++.+.|..+...|..|...+ ...|..++..|.
T Consensus 11 ~r~~~dl~~Wl~e~~~~l~s~d~G~Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~---~~~i~~rl~~l~ 87 (210)
T 3pdy_A 11 LRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPAT---RGAYRDCLGRLD 87 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHH---HHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc---hHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999998886433 356999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcCCCCCC
Q psy10634 169 DKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGR 248 (303)
Q Consensus 169 ~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s~~~g~ 248 (303)
.+|..|+.++..|+..|. .+++ |+.+++++..||.+++..+.+.++|+
T Consensus 88 ~~~~~L~~~a~~R~~~L~---~L~~-----------------------------f~~~~~~~~~Wl~eke~~~~s~d~g~ 135 (210)
T 3pdy_A 88 LQYAKLLNSSKARLRSLE---SLHS-----------------------------FVAAATKELMWLNEKEEEEVGFDWSD 135 (210)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHH-----------------------------HHHHHHHHHHHHHHHHHHHHHSCCST
T ss_pred HHHHHHHHHHHHHHHHHH---HHHH-----------------------------HHHHHHHHHHHHHHHHHHHHccccCC
Confidence 999999999999999998 4455 99999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 249 DEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 249 d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
+...++.++++|+.|+.+|..++.+|..+...|+.|+..|||+++.|.++++.|
T Consensus 136 ~~~~v~~l~~k~~~f~~el~~~~~~v~~l~~~~~~Ll~~~h~~~~~I~~~~~~l 189 (210)
T 3pdy_A 136 RNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAAL 189 (210)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998876
No 20
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.94 E-value=1e-26 Score=204.65 Aligned_cols=170 Identities=19% Similarity=0.215 Sum_probs=132.0
Q ss_pred HHHHhhchhhhhhhhcccccchHHHH--HHH--HHHHhhhhhc--------------------ch--hhhhhHHHHHHHH
Q psy10634 15 QVRSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVDIFLM--------------------YK--TSCFFPFHRYRSL 68 (303)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~~~~~--------------------~~--~~~~~l~~~~~~L 68 (303)
..++.+||++++..|.+.+||+|+.+ .++ |+.+...+.. .. +++..|..+|..|
T Consensus 29 ~~~l~~Wl~e~e~~l~s~d~g~Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~L 108 (224)
T 2iak_A 29 VQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKL 108 (224)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999855 555 5544111111 00 5677899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Q psy10634 69 QEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQ 148 (303)
Q Consensus 69 ~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~ 148 (303)
++++..|+..|+ .+++|+++|+++..||.++++.+.+.|+|+++.+|+.++++|+.|+.+|.+|+++|+.|...|+.
T Consensus 109 ~~~~~~R~~~Le---~l~~F~~~~~~~~~Wi~eke~~~~s~d~g~~l~~v~~L~~kh~~l~~el~~~~~~v~~v~~~g~~ 185 (224)
T 2iak_A 109 LNTSRNQERHLD---TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQ 185 (224)
T ss_dssp TTHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCC---------------CSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 149 MSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLD 187 (303)
Q Consensus 149 L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~ 187 (303)
|+..+||+++.|+.+++.|+.+|+.|.+++.+|+.+|++
T Consensus 186 L~~~~h~~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~~ 224 (224)
T 2iak_A 186 LLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224 (224)
T ss_dssp HHHTTCTTHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999963
No 21
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.94 E-value=1.7e-25 Score=194.90 Aligned_cols=173 Identities=30% Similarity=0.427 Sum_probs=153.4
Q ss_pred HHhhchhhhhhhhcccccchHHHH--HHH--HHHHhhhhh-----------------------cch--hhhhhHHHHHHH
Q psy10634 17 RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVDIFL-----------------------MYK--TSCFFPFHRYRS 67 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~~~~-----------------------~~~--~~~~~l~~~~~~ 67 (303)
+...||+++...|.+.+||+|+.+ .++ |+.+...+. ... .++..|..+|..
T Consensus 14 ~l~~Wl~~~e~~l~~~~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~ 93 (216)
T 1u5p_A 14 DFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQR 93 (216)
T ss_dssp HHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 455799999999999999999855 555 444311111 011 467889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Q psy10634 68 LQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAK 147 (303)
Q Consensus 68 L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~ 147 (303)
|+.++..|+.+|+.++.+++|+++++++..||.++++.+.+.++|+|+..|+.++++|+.|+.+|.++++.|+.|...|+
T Consensus 94 L~~~~~~R~~~Le~~~~l~qf~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~kh~~~~~el~~~~~~i~~l~~~g~ 173 (216)
T 1u5p_A 94 IKSMAAARRAKLNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGK 173 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 148 QMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDAL 189 (303)
Q Consensus 148 ~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~ 189 (303)
.|+..+||+++.|+.++..|+.+|..|.+++.+|..+|+.++
T Consensus 174 ~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al 215 (216)
T 1u5p_A 174 KLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESL 215 (216)
T ss_dssp HHHHTCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998875
No 22
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.94 E-value=6.6e-26 Score=199.42 Aligned_cols=183 Identities=19% Similarity=0.220 Sum_probs=154.8
Q ss_pred HHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHHHHHH
Q psy10634 85 LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARIEGAT 164 (303)
Q Consensus 85 l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~~~~ 164 (303)
...|.+.+.++..||.++++.+.+.++|.|+.+|+.++++|+.|+.+|.++.++|..+...+..+.. +.++.|..++
T Consensus 22 a~~~~~~~~~l~~Wl~e~e~~l~s~d~g~Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~---~~~~~i~~~~ 98 (224)
T 2iak_A 22 EEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTA---PLKLSYTDKL 98 (224)
T ss_dssp HHHHC-CHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCT---THHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---chhHHHHHHH
Confidence 4555666999999999999999999999999999999999999999999999999999877666542 5678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcCC
Q psy10634 165 SALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSS 244 (303)
Q Consensus 165 ~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s~ 244 (303)
..|..+|..|+..+..|+..|+ .+++ |+.+++++..||.++++.+.+.
T Consensus 99 ~~l~~~~~~L~~~~~~R~~~Le---~l~~-----------------------------F~~~~~~~~~Wi~eke~~~~s~ 146 (224)
T 2iak_A 99 HRLESQYAKLLNTSRNQERHLD---TLHN-----------------------------FVTRATNELIWLNEKEESEVAY 146 (224)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHH---HHHH-----------------------------HHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHH-----------------------------HHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998 5555 9999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 245 DFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 245 ~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
++|.|+..++.++++|+.|+.+|.+++.+|.++...|+.|+..|||+++.|..+++.|
T Consensus 147 d~g~~l~~v~~L~~kh~~l~~el~~~~~~v~~v~~~g~~L~~~~h~~~~~I~~~~~~l 204 (224)
T 2iak_A 147 DWSERNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENHPARLTIEAYRAAM 204 (224)
T ss_dssp ---------------CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred ccCCCchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998765
No 23
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.94 E-value=3e-25 Score=229.56 Aligned_cols=247 Identities=14% Similarity=0.174 Sum_probs=217.4
Q ss_pred HHhhchhhhhhhhcccccchHHHH--HHH--HHHHhh---------------h---------------hhcc-hhhhhhH
Q psy10634 17 RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVD---------------I---------------FLMY-KTSCFFP 61 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~---------------~---------------~~~~-~~~~~~l 61 (303)
+.+.||+++...+.+.+||.++.+ .++ |+.... . +... ......|
T Consensus 261 el~~Wi~~~~~~l~~~~~~~~l~~v~~~l~~~~~~~~~~k~~~~~e~~~le~~~~~l~~~l~~~~~~~~~~~~~~~~~~i 340 (863)
T 1sjj_A 261 DLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDI 340 (863)
T ss_dssp HHHHHHHHHGGGSSCCCCCSSHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHTTTHHHHHTTTTSSCCCCCSTTSCGGGH
T ss_pred HHHHHHHHHHHHHhccCcCCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
Confidence 467999999999999999999854 444 321100 0 0000 1356789
Q ss_pred HHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCC-CHHHHHHHHHHHHHHHH
Q psy10634 62 FHRYRSLQEPMQ----------IRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGN-SLTAVQSLQKKHQALET 130 (303)
Q Consensus 62 ~~~~~~L~~~~~----------~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~-~l~~v~~l~~~h~~~~~ 130 (303)
..+|..|..... .|+.+|+. .+.+|.+++.++..||.++++.+.+.++|+ ++..|+.++++|+.|+.
T Consensus 341 ~~~w~~L~~~~~~r~~~l~~~~~R~~~Le~--l~~~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~kh~~f~~ 418 (863)
T 1sjj_A 341 NNAWGGLEQAEKGYEEWLLNEIRRLERLDH--LAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFES 418 (863)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHEEHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHH
Confidence 999999998864 56677776 468999999999999999999999999998 99999999999999999
Q ss_pred HHhchHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchh
Q psy10634 131 ELASREPVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMS 210 (303)
Q Consensus 131 el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~ 210 (303)
++.+++++|..+...|++|+..+|++++.|..++..|+.+|..|..++..|+.+|.+++.+++
T Consensus 419 el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q----------------- 481 (863)
T 1sjj_A 419 DLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLE----------------- 481 (863)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence 999999999999999999999999999999999999999999999999999999999998887
Q ss_pred hhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy10634 211 LWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLD 286 (303)
Q Consensus 211 ~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~ 286 (303)
.+...+.+|..+++++..||.+++..+.++++|.|+++++.++++|+.|+.++..++..+.++...++.+..
T Consensus 482 ----~~~~l~~~f~~~a~~~~~Wl~~~e~~l~~~~~g~dl~~ve~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~~ 553 (863)
T 1sjj_A 482 ----TIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSK 553 (863)
T ss_dssp ----HHHHHHHHHHHHTTTTHHHHHHHHHHHHCCCCCSSSGGGHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 556667789999999999999999999999999999999999999999999999999889888888887765
No 24
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.92 E-value=1.7e-23 Score=181.47 Aligned_cols=178 Identities=22% Similarity=0.331 Sum_probs=157.3
Q ss_pred hhhHH-HHhhchhhhhhhhcccccchHHHH--HHH--HHHHhhh-----------------------hhcch--hhhhhH
Q psy10634 12 VAWQV-RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVDI-----------------------FLMYK--TSCFFP 61 (303)
Q Consensus 12 ~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~~-----------------------~~~~~--~~~~~l 61 (303)
|.+.+ +.+.||.++...+.+.+||.++.+ .++ |+.+... +.... .++..|
T Consensus 5 f~~~~~~~~~Wl~e~e~~l~~~~~g~dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~i~~~~~~l 84 (213)
T 1cun_A 5 FFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRLAQF 84 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 34444 567999999999999999999854 444 3332111 11111 577889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHH
Q psy10634 62 FHRYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSA 141 (303)
Q Consensus 62 ~~~~~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~ 141 (303)
..+|..|++.+..|+.+|+.++.+++|+.+++++..||.+++..+.+.++|+++..++.++++|+.|+.++..+++.|+.
T Consensus 85 ~~~w~~L~~~~~~R~~~Le~~~~~~~f~~~~~e~~~Wl~~~e~~l~~~~~g~~~~~v~~ll~~h~~~~~el~~~~~~i~~ 164 (213)
T 1cun_A 85 VDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVND 164 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 142 LASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDAL 189 (303)
Q Consensus 142 l~~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~ 189 (303)
|...|+.|+..+||+++.|..++..|+.+|..|...+..|+.+|+++.
T Consensus 165 l~~~~~~L~~~~~~~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~ 212 (213)
T 1cun_A 165 VCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212 (213)
T ss_dssp HHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999874
No 25
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.91 E-value=2.2e-23 Score=181.17 Aligned_cols=178 Identities=14% Similarity=0.108 Sum_probs=157.2
Q ss_pred hhhHH-HHhhchhhhhhhhcccccchHHHH--HHH--HHHHhh-------hhh----------c---c----h--hhhhh
Q psy10634 12 VAWQV-RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVD-------IFL----------M---Y----K--TSCFF 60 (303)
Q Consensus 12 ~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~-------~~~----------~---~----~--~~~~~ 60 (303)
|.+++ +.+.||.+++..+.+.++|.|+.+ .++ |+.+.. .+. . . . .++..
T Consensus 5 F~~~~~~l~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~l~~ 84 (214)
T 1s35_A 5 FLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEG 84 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 45555 567999999999999999999855 444 433211 110 0 0 0 47888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHH
Q psy10634 61 PFHRYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVS 140 (303)
Q Consensus 61 l~~~~~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~ 140 (303)
|..+|..|...+..|+.+|++++.++.|.++|.++..||.+++..+.+.++|+++.+|+.++++|+.|+.++.+++++|+
T Consensus 85 L~~~w~~L~~~~~~r~~~L~~~l~l~~F~~~~~~~~~Wl~~~E~~l~~~~~g~~~~~v~~llkkh~~f~~~l~~~~~~i~ 164 (214)
T 1s35_A 85 LDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVL 164 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 141 ALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDAL 189 (303)
Q Consensus 141 ~l~~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~ 189 (303)
.|...|++|+..+||+++.|..++..|..+|..|..++..|...|+.++
T Consensus 165 ~l~~~a~~L~~~~h~~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 165 SPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999998764
No 26
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.89 E-value=9.5e-23 Score=210.85 Aligned_cols=260 Identities=16% Similarity=0.196 Sum_probs=216.5
Q ss_pred hhhHH-HHhhchhhhhhhhcccccch-HHHH--HHH--HHHHhhhhh-----------------------cch--hhhhh
Q psy10634 12 VAWQV-RSVHSLDGVSHIVYSVVLGK-TIMT--KLL--HKLVVDIFL-----------------------MYK--TSCFF 60 (303)
Q Consensus 12 ~~~~~-~~~~~~~~~~~~~~~~~~g~-~l~~--~ll--~~~~~~~~~-----------------------~~~--~~~~~ 60 (303)
|.+.. +...||.++...+.+.++|. ++.+ .++ |+.+...+. ... .++..
T Consensus 375 F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~ 454 (863)
T 1sjj_A 375 FRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQK 454 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHH
Confidence 33444 45699999999999999998 7643 344 333211110 001 57888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q psy10634 61 PFHRYRSLQEPMQIRRDNLEDALLLY--------QYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETEL 132 (303)
Q Consensus 61 l~~~~~~L~~~~~~R~~~Le~~~~l~--------~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el 132 (303)
|..+|..|.+.+..|+.+|+.++.++ +|..++..+..||.+++..+.+.++|.++.+++.++++|+.|+.++
T Consensus 455 l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f~~~a~~~~~Wl~~~e~~l~~~~~g~dl~~ve~ll~kh~~~~~~l 534 (863)
T 1sjj_A 455 ICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATL 534 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHCCCCCSSSGGGHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhccHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999777 8999999999999999999999999999999999999999999999
Q ss_pred hchHHHHHHHHHHHHHHhhc-------CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcc
Q psy10634 133 ASREPVVSALASRAKQMSRS-------AHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNL 205 (303)
Q Consensus 133 ~~~~~~v~~l~~~g~~L~~~-------~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~ 205 (303)
.++++.++.+...++++... ++++.+.+..++..|..+|..|+.++..|+..|++++..++
T Consensus 535 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~------------ 602 (863)
T 1sjj_A 535 PDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQ------------ 602 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHHHHH------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------
Confidence 99999999999888888662 34455666778999999999999999999999999986554
Q ss_pred cCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy10634 206 LNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLL 285 (303)
Q Consensus 206 ~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~ 285 (303)
.+...+++|..+++++..||.+++..+.+.++|. ..+++.++++|+.|+.++......+..+...++.|.
T Consensus 603 ---------~~~~l~~~F~~~a~~~~~Wi~e~e~~l~~~~~~~-~~~le~~l~~~~~~~~el~~~~~~i~~l~~l~~~L~ 672 (863)
T 1sjj_A 603 ---------QNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM-HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQ 672 (863)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTCT-TTSSHHHHHHHHHHHHHHHTTGGGHHHHHHHHHHHH
T ss_pred ---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4444556799999999999999999999877652 356777899999999999999999999999999998
Q ss_pred hcCCCChh
Q psy10634 286 DRNHFDSK 293 (303)
Q Consensus 286 ~~~~~~~~ 293 (303)
..++++.+
T Consensus 673 ~~~~~~~~ 680 (863)
T 1sjj_A 673 EALIFDNK 680 (863)
T ss_dssp TTTCCCCT
T ss_pred HhcCCCCC
Confidence 88775443
No 27
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.88 E-value=4.3e-22 Score=166.53 Aligned_cols=133 Identities=26% Similarity=0.332 Sum_probs=128.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhch
Q psy10634 56 TSCFFPFHRYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASR 135 (303)
Q Consensus 56 ~~~~~l~~~~~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~ 135 (303)
+++..|..+|..|...+..|+.+|++++.+++|+++|+++..||.+++..+.+.++ .|+.+|+.++++|+.|+++|.++
T Consensus 29 ~r~~~l~~rw~~L~~~a~~R~~~Le~s~~lq~F~~d~~el~~Wi~ek~~~a~~~~~-~d~~~v~~ll~kH~afe~El~a~ 107 (161)
T 3lbx_A 29 ERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSY-EDPTNIQGKYQKHQSLEAEVQTK 107 (161)
T ss_dssp GHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCc-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999999999999999999999999998888777 79999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 136 EPVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDAL 189 (303)
Q Consensus 136 ~~~v~~l~~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~ 189 (303)
++.|..|...|+.|+..+|++++.|+.+++.|+..|+.|...+..|..+|.+|+
T Consensus 108 ~~~~~~l~~~g~~Li~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eAl 161 (161)
T 3lbx_A 108 SRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL 161 (161)
T ss_dssp HHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999998763
No 28
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.88 E-value=7.8e-22 Score=172.36 Aligned_cols=176 Identities=22% Similarity=0.320 Sum_probs=131.5
Q ss_pred cccchhhhHH-HHhhchhhhhhhhcccccchHHHH--HHH--HHHHhh-------hhh----------------cch--h
Q psy10634 7 LGFSNVAWQV-RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVD-------IFL----------------MYK--T 56 (303)
Q Consensus 7 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~-------~~~----------------~~~--~ 56 (303)
+.+..|...+ +.+.||++++..+.+.++|.|+.+ .++ |+.+.. .+. ..+ .
T Consensus 13 ~~~~~F~~~~~~l~~Wl~~~~~~l~~~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~~~~~i~~ 92 (218)
T 3fb2_A 13 HDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQ 92 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCTTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCchHHHHH
Confidence 3344555555 566999999999999999999854 444 433211 110 001 5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchH
Q psy10634 57 SCFFPFHRYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASRE 136 (303)
Q Consensus 57 ~~~~l~~~~~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~ 136 (303)
.+..|..+|..|+..+..|+.+|++++.++.|.++++.+..||.+++..+.+.++|+++.+|+.++++|+.|+.++.+++
T Consensus 93 ~l~~L~~~w~~L~~~~~~R~~~L~q~l~l~~F~~d~~~~~~WL~~~e~~L~~~~~g~s~~~ve~ll~~h~~f~~~l~~~~ 172 (218)
T 3fb2_A 93 KLDILDQERADLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQE 172 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhH
Confidence 77889999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 137 PVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRR 182 (303)
Q Consensus 137 ~~v~~l~~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~ 182 (303)
.+|..|...|++|+..+||+++.|..++..|+.+|+.|.+.+..|+
T Consensus 173 ~~v~~l~~~~~~L~~~~h~~~~~I~~~~~~l~~rW~~l~~~l~~rr 218 (218)
T 3fb2_A 173 EKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218 (218)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999998875
No 29
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.87 E-value=2.9e-21 Score=185.29 Aligned_cols=170 Identities=12% Similarity=0.153 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHH
Q psy10634 89 LRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARIEGATSALQ 168 (303)
Q Consensus 89 ~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~~~~~~L~ 168 (303)
+++++++..||.+++..+.+.|+|.|+.+|+.++++|+.|+++|.++...|..+...+. + ..++..|.
T Consensus 8 ~r~v~dl~~Wl~E~~~~L~S~d~GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~------~------~~~~~~L~ 75 (450)
T 3r6n_A 8 KHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLR------E------KSAIYQLE 75 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------C------HHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhcCccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------C------cHHHHHHH
Confidence 57789999999999999999999999999999999999999999999999999886631 1 13578899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhhhcCCCCCC
Q psy10634 169 DKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGR 248 (303)
Q Consensus 169 ~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~l~s~~~g~ 248 (303)
.+|..|...+..|+.+|+ .+++ |+.++++.+.||.+++..+.+.++|+
T Consensus 76 ~~y~~L~~~a~~Rr~~Le---~L~q-----------------------------Fl~d~~ee~~Wi~EKe~~~~s~d~gd 123 (450)
T 3r6n_A 76 EEYENLLKASFERMDHLR---QLQN-----------------------------IIQATSREIMWINDCEEEELLYDWSD 123 (450)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHH-----------------------------HHHHHHHHHHHHHHHHHHHHSCCCST
T ss_pred HHHHHHHHHHHHHHHHHH---HHHH-----------------------------HHHHHHHHHHHHHHHHHHHhccccCc
Confidence 999999999999999997 3555 99999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 249 DEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 249 d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
++..+..++++|+.|+.+|..++.+|..+...|+.|+..|||++++|.++++.|
T Consensus 124 ~l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~~Hpas~~I~~r~~~L 177 (450)
T 3r6n_A 124 KNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTL 177 (450)
T ss_dssp TCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHcCCCCchHHHHHHHHH
Confidence 888889999999999999999999999999999999999999999999999876
No 30
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.86 E-value=2.1e-21 Score=160.25 Aligned_cols=130 Identities=25% Similarity=0.374 Sum_probs=124.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhch
Q psy10634 56 TSCFFPFHRYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASR 135 (303)
Q Consensus 56 ~~~~~l~~~~~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~ 135 (303)
+++..|..+|..|++.+..|+.+|++++.+++|.++|+++..||.+++..+.+.++ .|+.+++.++++|+.|+++|.++
T Consensus 19 ~r~~~l~~r~~~L~~~a~~R~~~Le~s~~l~~F~~d~~el~~Wi~ek~~~~~~~~~-~d~~~v~~~l~kH~afe~El~a~ 97 (149)
T 3f31_A 19 ERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDENY-KDPTNLQGKLQKHQAFEAEVQAN 97 (149)
T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSS-CSSSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999998877777 57899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 136 EPVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLL 186 (303)
Q Consensus 136 ~~~v~~l~~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~ 186 (303)
.+.|..|...|+.|+..+||+++.|+.+++.|+.+|+.|...+..|...|.
T Consensus 98 ~~~l~~v~~~g~~Li~~~~~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 98 SGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp THHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999884
No 31
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.86 E-value=1.7e-21 Score=170.14 Aligned_cols=175 Identities=17% Similarity=0.099 Sum_probs=127.9
Q ss_pred HHhhchhhhhhhhcccccchHHHH--HHH--HHHHhhhhh------------------c------ch--hhhhhHHHHHH
Q psy10634 17 RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVDIFL------------------M------YK--TSCFFPFHRYR 66 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~~~~------------------~------~~--~~~~~l~~~~~ 66 (303)
++..||.++...+.+.+||.|+.. .++ |+.+...+. . .. .++..|+.+|.
T Consensus 12 ~l~~Wl~~ke~~l~~~~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~ 91 (218)
T 3edu_A 12 DLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWA 91 (218)
T ss_dssp HHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 567999999999999999999733 232 222211110 0 00 56778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Q psy10634 67 SLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRA 146 (303)
Q Consensus 67 ~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g 146 (303)
.|...+..|+..|+.+..+++|+++|.++..||.+++..+. .|+|.|+..|+.++++|+.|+.+|.++++.|..|...|
T Consensus 92 ~L~~~~~~R~~~L~~a~~~~~F~~~~~e~~~Wl~ek~~~l~-~~~g~dl~~v~~l~~~h~~~e~dL~~~~~~v~~l~~~a 170 (218)
T 3edu_A 92 DLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELP-EDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVA 170 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999884 88999999999999999999999999999999999999
Q ss_pred HHHhhcCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 147 KQMSRSAHF-AAARIEGATSALQDKLASLRNAASVRRLRLLDALESQ 192 (303)
Q Consensus 147 ~~L~~~~h~-~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~ 192 (303)
.+|+..+++ .++.|..++..|..+|..|...+..|+..|..++.+|
T Consensus 171 ~~L~~~~~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~ 217 (218)
T 3edu_A 171 TRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKF 217 (218)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC-------------
T ss_pred HHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999987654 5799999999999999999999999999999998764
No 32
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.78 E-value=2.7e-18 Score=152.89 Aligned_cols=185 Identities=15% Similarity=0.187 Sum_probs=154.2
Q ss_pred cchhhhHHH-Hhhchhhhhhhhccccc-chHHHH--HHH--HHHHhhhhh-----------------------cch--hh
Q psy10634 9 FSNVAWQVR-SVHSLDGVSHIVYSVVL-GKTIMT--KLL--HKLVVDIFL-----------------------MYK--TS 57 (303)
Q Consensus 9 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-g~~l~~--~ll--~~~~~~~~~-----------------------~~~--~~ 57 (303)
+..|.+... ...||.++...+.+.+| |.++.+ .++ |+.+...+. ... ++
T Consensus 16 ~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~r 95 (250)
T 1quu_A 16 AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDR 95 (250)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHH
Confidence 445667664 45999999999999999 999744 444 433211111 011 56
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHH
Q psy10634 58 CFFPFHRYRSLQEPMQIRRDNLEDALLLY--------QYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALE 129 (303)
Q Consensus 58 ~~~l~~~~~~L~~~~~~R~~~Le~~~~l~--------~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~ 129 (303)
+..|..+|..|.+.+..|+..|+.++.++ +|..+++++..||.++++.+.+.++|.++.+++.++++|+.|+
T Consensus 96 ~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~~~~~~d~e~v~~ll~~h~~~~ 175 (250)
T 1quu_A 96 CQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFK 175 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCCSTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999877 9999999999999999999998899999999999999999999
Q ss_pred HHHhchH---HHHHHHHHHHHHHhhcCCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 130 TELASRE---PVVSALASRAKQMSRSAHF----AAARIEGATSALQDKLASLRNAASVRRLRLLDALESQM 193 (303)
Q Consensus 130 ~el~~~~---~~v~~l~~~g~~L~~~~h~----~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q 193 (303)
.++...+ ..|..+...++.|+...|+ +.+.|..++..|+.+|..|++++..|...|.+++..++
T Consensus 176 ~~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~q~ 246 (250)
T 1quu_A 176 ATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQH 246 (250)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666665 5566667788999988875 67889999999999999999999999999999987664
No 33
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=99.71 E-value=7e-18 Score=131.07 Aligned_cols=105 Identities=24% Similarity=0.382 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHHH
Q psy10634 82 ALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAAARIE 161 (303)
Q Consensus 82 ~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~ 161 (303)
+++++.|.++|+.+..||.+++..+.+.++|+++..|+.++++|+.|+.++.++..+|..|...|++|+..+||+++.|.
T Consensus 2 ~~~lq~F~~d~~~~e~Wl~~~e~~l~~~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~~~~~I~ 81 (107)
T 2spc_A 2 NLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVD 81 (107)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 35689999999999999999998899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 162 GATSALQDKLASLRNAASVRRLRLL 186 (303)
Q Consensus 162 ~~~~~L~~~W~~L~~l~~~r~~~L~ 186 (303)
.++..|..+|..|..++..|+..|+
T Consensus 82 ~r~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 82 EKRKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999884
No 34
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.71 E-value=4.4e-17 Score=136.02 Aligned_cols=125 Identities=18% Similarity=0.271 Sum_probs=112.5
Q ss_pred HHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHH
Q psy10634 144 SRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQF 223 (303)
Q Consensus 144 ~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF 223 (303)
..|.++++ +++.|+.+++.|..+|..|...+..|+..|++++.+++ |
T Consensus 15 ~~~~k~~e----~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~~lq~-----------------------------F 61 (161)
T 3lbx_A 15 SSGPKVLE----TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQV-----------------------------F 61 (161)
T ss_dssp -------C----CSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------H
T ss_pred CCCcchhh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------H
Confidence 44555543 67899999999999999999999999999999998777 9
Q ss_pred HHHHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 224 YAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 224 ~~d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
+.|++++..||.++...+.++++ +|+.+++.++++|++|+.+|.++..+|..+...|+.|+..+||+++.|+.|++.|
T Consensus 62 ~~d~~el~~Wi~ek~~~a~~~~~-~d~~~v~~ll~kH~afe~El~a~~~~~~~l~~~g~~Li~~~~~~~~~I~~rl~eL 139 (161)
T 3lbx_A 62 KRDADDLGKWIMEKVNILTDKSY-EDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEEL 139 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSC-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 99999999999999999888777 7999999999999999999999999999999999999999999999999999876
No 35
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.70 E-value=6.4e-17 Score=133.29 Aligned_cols=118 Identities=20% Similarity=0.383 Sum_probs=111.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHH
Q psy10634 155 FAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWL 234 (303)
Q Consensus 155 ~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL 234 (303)
++++.|+.++..|..+|..|...+..|+..|+++..+++ |..|++++..||
T Consensus 12 ~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~l~~-----------------------------F~~d~~el~~Wi 62 (149)
T 3f31_A 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQF-----------------------------FQRDAEELEKWI 62 (149)
T ss_dssp -CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHH
Confidence 467899999999999999999999999999999998777 999999999999
Q ss_pred HhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 235 KEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 235 ~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
.+++..+.++++ +|+..++.++++|++|+.+|.++..+|..+...|+.|+..+||+++.|..|++.|
T Consensus 63 ~ek~~~~~~~~~-~d~~~v~~~l~kH~afe~El~a~~~~l~~v~~~g~~Li~~~~~~~~~I~~rl~~l 129 (149)
T 3f31_A 63 QEKLQIASDENY-KDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMEL 129 (149)
T ss_dssp HHHHHHTTSCSS-CSSSCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHH
T ss_pred HHHHHHHcCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 999998877766 6899999999999999999999999999999999999999999999999999876
No 36
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.67 E-value=8.1e-16 Score=160.27 Aligned_cols=210 Identities=19% Similarity=0.254 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhc----hHHHHHHHHHHHH
Q psy10634 72 MQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELAS----REPVVSALASRAK 147 (303)
Q Consensus 72 ~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~----~~~~v~~l~~~g~ 147 (303)
-..|..+|..+....+|.+.+.++..|+.++...+...+.|+++..++.+++.|..|+.+... ....+..+...-+
T Consensus 755 E~~R~~~l~~~~~~iQY~~~a~~L~~WIr~kqa~l~~r~~~~sl~~IQ~ll~~f~~fk~~~kp~r~~ek~~Le~l~~~iq 834 (1010)
T 1g8x_A 755 EEAREQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQ 834 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH
Confidence 345666777777788999999999999999999999999999999999999999999875432 1112222222222
Q ss_pred -HHhhcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHH
Q psy10634 148 -QMSRSAH-FAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYA 225 (303)
Q Consensus 148 -~L~~~~h-~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~ 225 (303)
.|...+. |-.+.....+..|+..|..|...+..|+..|..++..+. +....+.+|..
T Consensus 835 tklrl~~r~~~~p~~gl~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe---------------------~L~~L~qkF~r 893 (1010)
T 1g8x_A 835 TKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQK---------------------KIAVLLQKYNR 893 (1010)
T ss_dssp HHHHTTTCCCCCCCTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHH
Confidence 2333333 222334556789999999999999999999999987665 55556778999
Q ss_pred HHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhcCCCChhHHHHHhhhc
Q psy10634 226 EVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVG-HLSKLCQSLLDRNHFDSKNISKKQVNT 302 (303)
Q Consensus 226 d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~-~L~~~~~~L~~~~~~~~~~I~~~~~~~ 302 (303)
+|+.+++||.+++..|.+.++|.|+.+++.++++|++|+.+|.+++++|. .|...++.|...+|+++++|..|.++|
T Consensus 894 ka~~~e~Wl~ek~~~l~s~d~g~dL~~Vqal~KKhea~e~dl~a~e~ri~~~l~~~a~eL~~~~y~~~~~I~~R~~~L 971 (1010)
T 1g8x_A 894 ILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTF 971 (1010)
T ss_dssp HHHHHHHHHHHTHHHHSSCCSCCSTTTTGGGTTSHHHHTTTTTHHHHTHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 999999999999999999999998765
No 37
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.67 E-value=1.9e-15 Score=118.80 Aligned_cols=110 Identities=21% Similarity=0.323 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCCh---HH
Q psy10634 84 LLYQYLRDVDDEMQWLLEKEPLAVS-TDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAA---AR 159 (303)
Q Consensus 84 ~l~~f~~~~~~~~~Wl~e~e~~~~~-~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~---~~ 159 (303)
.|..|..+++++..||.+++..+.+ .++|.++..++.++++|+.|+.+|.+|++.|..|+..|..|+..+|+++ ..
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~ 82 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFE 82 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH
Confidence 4789999999999999999988754 7899999999999999999999999999999999999999999988764 46
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 160 IEGATSALQDKLASLRNAASVRRLRLLDALESQM 193 (303)
Q Consensus 160 I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q 193 (303)
|+.+++.|+.+|..|...+..|...|+.++..+|
T Consensus 83 i~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~~Q 116 (118)
T 3uul_A 83 IQEQMTLLNARWEALRVESMERQSRLHDALMELQ 116 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999986543
No 38
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.66 E-value=1.8e-15 Score=118.86 Aligned_cols=110 Identities=15% Similarity=0.284 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhc-ccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhcCCCCh---HH
Q psy10634 84 LLYQYLRDVDDEMQWLLEKEPLAV-STDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSRSAHFAA---AR 159 (303)
Q Consensus 84 ~l~~f~~~~~~~~~Wl~e~e~~~~-~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~---~~ 159 (303)
.|++|..+++++..||.+++..+. ..++|.++..++.++++|+.|+.+|.+|++.|..|+..|..|+..+|+++ +.
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~ 82 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETE 82 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 589999999999999999998875 47899999999999999999999999999999999999999999988754 57
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 160 IEGATSALQDKLASLRNAASVRRLRLLDALESQM 193 (303)
Q Consensus 160 I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q 193 (303)
|+.+++.|+.+|..|...+..|...|+.++..+|
T Consensus 83 i~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~Q 116 (119)
T 3uun_A 83 VQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQ 116 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986654
No 39
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.53 E-value=4.2e-14 Score=120.27 Aligned_cols=134 Identities=20% Similarity=0.270 Sum_probs=110.2
Q ss_pred hhhHH-HHhhchhhhhhhhcccccchHHHH--HHH--HHHHhh-----------------------hhhcch--hhhhhH
Q psy10634 12 VAWQV-RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLVVD-----------------------IFLMYK--TSCFFP 61 (303)
Q Consensus 12 ~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~~~-----------------------~~~~~~--~~~~~l 61 (303)
|.+.+ +.+.||++++..+.+.++|.|+.. .++ |+.+.. ++...+ ..+..|
T Consensus 9 F~~~~~dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~~~~~i~~~l~~L 88 (185)
T 3lbx_B 9 FFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQASEEIREKLQQV 88 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 33444 567999999999999999998733 333 322211 111111 578889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHH
Q psy10634 62 FHRYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSA 141 (303)
Q Consensus 62 ~~~~~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~ 141 (303)
..+|..|...+..|+.+|+.++.++.|.++|..+..||..++..+.+.++|+++..|+.++++|+.|+.++.+++.+|..
T Consensus 89 ~~~w~~L~~~w~~r~~~L~~~l~l~~F~~d~~~~~~Wl~~~e~~L~~~~~g~sl~~ve~LlkkH~~fe~~l~~~~e~i~~ 168 (185)
T 3lbx_B 89 MSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAA 168 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q psy10634 142 LASR 145 (303)
Q Consensus 142 l~~~ 145 (303)
|...
T Consensus 169 L~~~ 172 (185)
T 3lbx_B 169 LEKP 172 (185)
T ss_dssp HHSC
T ss_pred Hhhh
Confidence 8754
No 40
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.51 E-value=9.6e-15 Score=152.22 Aligned_cols=177 Identities=21% Similarity=0.204 Sum_probs=151.1
Q ss_pred HHhhchhhhhhhhcccccchHHHH--HHH--HHHH---------------hhh---h------------hcch-hhhhhH
Q psy10634 17 RSVHSLDGVSHIVYSVVLGKTIMT--KLL--HKLV---------------VDI---F------------LMYK-TSCFFP 61 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~g~~l~~--~ll--~~~~---------------~~~---~------------~~~~-~~~~~l 61 (303)
+...|+.+++..+...+||.++.. .++ ++.. +.. + ...+ -....|
T Consensus 777 ~L~~WIr~kqa~l~~r~~~~sl~~IQ~ll~~f~~fk~~~kp~r~~ek~~Le~l~~~iqtklrl~~r~~~~p~~gl~~~dL 856 (1010)
T 1g8x_A 777 ELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEI 856 (1010)
T ss_dssp HHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCTTCSHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHHHH
Confidence 466899999999999999998744 232 1111 000 0 0001 245689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHh
Q psy10634 62 FHRYRSLQEPMQIRRDNLEDAL--------LLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELA 133 (303)
Q Consensus 62 ~~~~~~L~~~~~~R~~~Le~~~--------~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~ 133 (303)
+.+|..|......|...|...+ ..++|.++|+....||.+++..+.+.++|+++..|++++++|++|+.+|.
T Consensus 857 ~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~d~g~dL~~Vqal~KKhea~e~dl~ 936 (1010)
T 1g8x_A 857 DSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQ 936 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSCCSCCSTTTTGGGTTSHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888887753 24899999999999999999999999999999999999999999999999
Q ss_pred chHHHHH-HHHHHHHHHhhcCCCChHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 134 SREPVVS-ALASRAKQMSRSAHFAAARIEGATSALQ-DKLASLRNAASVRRLRLLDALESQM 193 (303)
Q Consensus 134 ~~~~~v~-~l~~~g~~L~~~~h~~~~~I~~~~~~L~-~~W~~L~~l~~~r~~~L~~a~~~~q 193 (303)
+++.+|. .+.+.|++|++.+|++++.|..++..|. .+|+.|.+++..|+..|++++.+++
T Consensus 937 a~e~ri~~~l~~~a~eL~~~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq~~~ 998 (1010)
T 1g8x_A 937 SLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQ 998 (1010)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTSTTT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999999996 8999999999999999999988777
No 41
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.49 E-value=6.6e-16 Score=160.98 Aligned_cols=212 Identities=20% Similarity=0.278 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhc-hHHHHHHHH
Q psy10634 65 YRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELAS-REPVVSALA 143 (303)
Q Consensus 65 ~~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~-~~~~v~~l~ 143 (303)
...+..+-..|..+|.. ..|.+.+.++..|+.++...+...++++++..++.+.+.|..|+..... +......+.
T Consensus 744 ~~~~~~LE~~R~~~l~~----~eYe~~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekpp~~~ek~rLe 819 (995)
T 2ycu_A 744 AGVLAQLEEERASEQTK----SDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELE 819 (995)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHHHHHHHHHHHC
T ss_pred cchhhhHHHHHHHHhhh----hhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 34444455556666654 5889999999999999998888888889999999999999888766442 222222222
Q ss_pred HHHH------HHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhh
Q psy10634 144 SRAK------QMSRSAHFAAARIEGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHS 217 (303)
Q Consensus 144 ~~g~------~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~ 217 (303)
.... +++...++. +........|+..|..|...+..|...|...+..+. +..
T Consensus 820 al~~~iqtkLrl~~~~~y~-p~~gl~~~~L~~~W~~L~~ae~er~~~L~~el~Rle---------------------rL~ 877 (995)
T 2ycu_A 820 AIYNSLQTKLRLIKREPFV-APAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQK---------------------KIA 877 (995)
T ss_dssp SSSCCCCCSSCSSTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHH
T ss_pred HHHHHHHHHHHhhcCCCCC-cchhccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH---------------------HHH
Confidence 1111 111111222 334567899999999999999999999988876554 444
Q ss_pred hhHHHHHHHHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhcCCCChhHHH
Q psy10634 218 LLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVG-HLSKLCQSLLDRNHFDSKNIS 296 (303)
Q Consensus 218 ~~~~qF~~d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~-~L~~~~~~L~~~~~~~~~~I~ 296 (303)
..+.+|+.+|+.+++||.+++..+.++++|.|+.+++.++++|++|+.+|.+++.++. .+.+.++.|...+|+++++|.
T Consensus 878 ~la~kf~~ka~~~e~Wl~eke~~l~s~d~g~dl~~vqallkKhea~e~dl~a~e~ri~~~l~~~a~~L~~~~y~~~~~I~ 957 (995)
T 2ycu_A 878 VLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELT 957 (995)
T ss_dssp HTTTGGGGCCCCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCSSHHHHHHHHTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Confidence 4567799999999999999999999999999999999999999999999999999997 999999999999999999999
Q ss_pred HHhhhc
Q psy10634 297 KKQVNT 302 (303)
Q Consensus 297 ~~~~~~ 302 (303)
.|...|
T Consensus 958 ~R~~~l 963 (995)
T 2ycu_A 958 ERKDTF 963 (995)
T ss_dssp HHHTHH
T ss_pred HHHHHH
Confidence 998875
No 42
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=99.49 E-value=4.8e-13 Score=117.81 Aligned_cols=194 Identities=15% Similarity=0.145 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHh-chH---HHHHHHHHHHHHHhhcCCCChHHH
Q psy10634 85 LYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELA-SRE---PVVSALASRAKQMSRSAHFAAARI 160 (303)
Q Consensus 85 l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~-~~~---~~v~~l~~~g~~L~~~~h~~~~~I 160 (303)
...|.+.+++++.||..+...+...++|+++.+++.++..|..|...-. .+. ..+..+...-+.-+..+.+.++.
T Consensus 13 ~~eYe~~as~Ll~WI~~~~~~l~~r~f~~sl~~vq~~l~~f~~fr~~ekppk~~EK~~Le~ll~~lqtklr~~~~~ppe- 91 (235)
T 2odv_A 13 WQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSLEGAVQAGQLKVPP- 91 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC-CCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCC-
Confidence 4688999999999999999999999999999999999999999985432 221 11222222222222334322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhhcccCchhhhhhhhhhhHHHHHHHHHHHHhHHHhhhhh
Q psy10634 161 EGATSALQDKLASLRNAASVRRLRLLDALESQMLYLASGYLESNLLNPMSLWKTKHSLLIFQFYAEVAEAEVWLKEKKPI 240 (303)
Q Consensus 161 ~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~~~q~~l~~~~~~~~~~~~~~~w~l~~~~~~~qF~~d~~e~~~WL~e~~~~ 240 (303)
.-....|+..|..|......|+..|...+.... +.......|...|..++.||.++...
T Consensus 92 g~~~~di~~~W~~Le~ae~eRe~aL~~el~Rle---------------------rLe~La~kf~rka~~~e~~L~~~~~~ 150 (235)
T 2odv_A 92 GYHPLDVEKEWGKLHVAILEREKQLRSEFERLE---------------------ALQRIVTKLQMEAGLAEEQLNQADAL 150 (235)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223678999999999999999999999976554 34445567999999999999999999
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhhcC
Q psy10634 241 LHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVNTH 303 (303)
Q Consensus 241 l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~~~ 303 (303)
|.. ++ .++. +...+++|++|+.+|..++.+|..|...++.|...++++++.|..|...+|
T Consensus 151 L~~-d~-~~l~-~~~a~k~~e~ie~dL~~~e~~i~~l~~~a~~L~~~~y~~a~~i~~r~~~l~ 210 (235)
T 2odv_A 151 LQS-DV-RLLA-AGKVPQRAGEVERDLDKADSMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLH 210 (235)
T ss_dssp HHH-HH-HHTT-TTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHH
T ss_pred HHH-hh-hhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 832 22 1112 223367899999999999999999999999999999999999999987764
No 43
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.41 E-value=5.7e-13 Score=120.80 Aligned_cols=147 Identities=14% Similarity=0.051 Sum_probs=120.4
Q ss_pred cchhhhHH-HHhhchhhhhhhhcccccchHHH--HHHH--HHHH-----------------------hhhhhcch--hhh
Q psy10634 9 FSNVAWQV-RSVHSLDGVSHIVYSVVLGKTIM--TKLL--HKLV-----------------------VDIFLMYK--TSC 58 (303)
Q Consensus 9 ~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~l~--~~ll--~~~~-----------------------~~~~~~~~--~~~ 58 (303)
.-.|.+++ +.+.||.++.....+.+||..+. ..+. |+.+ .+|+.... +++
T Consensus 10 L~qF~~d~~~e~~Wi~Eke~~~~~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~hp~~~~I~~r~ 89 (283)
T 3pe0_A 10 LHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQ 89 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 33556666 56699999999998999997531 1111 2211 11111111 678
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhch
Q psy10634 59 FFPFHRYRSLQEPMQIRRDNLEDALLLYQYLRDVDDEMQWLL---EKEPLAVSTDLGNSLTAVQSLQKKHQALETELASR 135 (303)
Q Consensus 59 ~~l~~~~~~L~~~~~~R~~~Le~~~~l~~f~~~~~~~~~Wl~---e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~ 135 (303)
..|...|..|...+..|+.+|+.+..+++|+.++++..+||. ++...+.+.|+|+|..+++.++++|+.|+.+|..+
T Consensus 90 ~~L~~~W~~L~~l~~~R~~~L~~a~~~~qF~~da~e~e~Wl~~~~e~~~~~~s~d~g~d~~s~~~LLkkh~~le~~l~~~ 169 (283)
T 3pe0_A 90 AALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEY 169 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999887 88888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCC
Q psy10634 136 EPVVSALASRAKQMSRSAHF 155 (303)
Q Consensus 136 ~~~v~~l~~~g~~L~~~~h~ 155 (303)
+..|..|...|+.|+..++.
T Consensus 170 ~~~i~~L~~~a~~l~~l~~r 189 (283)
T 3pe0_A 170 KGHLSGLAKRAKAVVQLKPR 189 (283)
T ss_dssp HHHHHHHHHHHTTCCCCGGG
T ss_pred HHHHHHHHHHHHHhhcccCC
Confidence 99999999999999876653
No 44
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=99.40 E-value=6.2e-14 Score=108.57 Aligned_cols=86 Identities=21% Similarity=0.427 Sum_probs=81.2
Q ss_pred hhhHHHHHHHHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHH
Q psy10634 217 SLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNIS 296 (303)
Q Consensus 217 ~~~~~qF~~d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~ 296 (303)
|..+.+|..++++++.||.+++..+.+.++|+|+.+|+.++++|++|+.++.++..+|..|...|+.|+..|||+++.|.
T Consensus 2 ~~~lq~F~~d~~~~e~Wl~~~e~~l~~~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~~~~~I~ 81 (107)
T 2spc_A 2 NLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVD 81 (107)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 34566799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhc
Q psy10634 297 KKQVNT 302 (303)
Q Consensus 297 ~~~~~~ 302 (303)
.|.++|
T Consensus 82 ~r~~~l 87 (107)
T 2spc_A 82 EKRKQV 87 (107)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998765
No 45
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.29 E-value=5.8e-14 Score=146.42 Aligned_cols=177 Identities=20% Similarity=0.199 Sum_probs=139.2
Q ss_pred HHhhchhhhhhhhcccccchHHHH--HHHHH--HH---------------hhhh---------------hcch-hhhhhH
Q psy10634 17 RSVHSLDGVSHIVYSVVLGKTIMT--KLLHK--LV---------------VDIF---------------LMYK-TSCFFP 61 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~g~~l~~--~ll~~--~~---------------~~~~---------------~~~~-~~~~~l 61 (303)
+.+.|+..+...+....||..+.. ..+.. .. +..+ ...+ -....|
T Consensus 769 ~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekpp~~~ek~rLeal~~~iqtkLrl~~~~~y~p~~gl~~~~L 848 (995)
T 2ycu_A 769 ELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEI 848 (995)
T ss_dssp HHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHHHHHHHHHHHCSSSCCCCCSSCSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhcCCCCCcchhccHHHH
Confidence 467899999999999999998754 23211 10 0000 0000 236789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHh
Q psy10634 62 FHRYRSLQEPMQIRRDNLEDAL--------LLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELA 133 (303)
Q Consensus 62 ~~~~~~L~~~~~~R~~~Le~~~--------~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~ 133 (303)
..+|..|......|...|...+ .+++|.++|+...+||.+++..+.+.++|+|+..|+.++++|++|+.+|.
T Consensus 849 ~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s~d~g~dl~~vqallkKhea~e~dl~ 928 (995)
T 2ycu_A 849 DSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQ 928 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888876543 23789999999999999999999999999999999999999999999999
Q ss_pred chHHHHH-HHHHHHHHHhhcCCCChHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 134 SREPVVS-ALASRAKQMSRSAHFAAARIEGATSAL-QDKLASLRNAASVRRLRLLDALESQM 193 (303)
Q Consensus 134 ~~~~~v~-~l~~~g~~L~~~~h~~~~~I~~~~~~L-~~~W~~L~~l~~~r~~~L~~a~~~~q 193 (303)
+++.+|. .+.+.|++|++.+|++++.|..+...| ..+|..|.+++..|+..|++++..+|
T Consensus 929 a~e~ri~~~l~~~a~~L~~~~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~~~q 990 (995)
T 2ycu_A 929 SLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQ 990 (995)
T ss_dssp HTTTCSCSSHHHHHHHHTTTHHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999997 999999999999999999999999999 69999999999999999999998776
No 46
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=99.26 E-value=3.3e-11 Score=106.05 Aligned_cols=164 Identities=10% Similarity=0.123 Sum_probs=129.0
Q ss_pred HHhhchhhhhhhhcccccchHHHH--HHHHHH-----------------H------------hhhhhcch-hhhhhHHHH
Q psy10634 17 RSVHSLDGVSHIVYSVVLGKTIMT--KLLHKL-----------------V------------VDIFLMYK-TSCFFPFHR 64 (303)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~g~~l~~--~ll~~~-----------------~------------~~~~~~~~-~~~~~l~~~ 64 (303)
+++.||.++...+.+..||.++.+ .++.+. + ++.|...+ -.+..|+..
T Consensus 22 ~Ll~WI~~~~~~l~~r~f~~sl~~vq~~l~~f~~fr~~ekppk~~EK~~Le~ll~~lqtklr~~~~~ppeg~~~~di~~~ 101 (235)
T 2odv_A 22 LLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSLEGAVQAGQLKVPPGYHPLDVEKE 101 (235)
T ss_dssp HHHHHHHHHHHHHHCC-CCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTCSHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 688999999999999999999755 333111 0 11111111 246689999
Q ss_pred HHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchH
Q psy10634 65 YRSLQEPMQIRRDNLEDAL--------LLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASRE 136 (303)
Q Consensus 65 ~~~L~~~~~~R~~~Le~~~--------~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~ 136 (303)
|..|......|...|...+ ....|.++|.....||++++..+ +.|. +++. +...+++|+.|..+|.+++
T Consensus 102 W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L-~~d~-~~l~-~~~a~k~~e~ie~dL~~~e 178 (235)
T 2odv_A 102 WGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALL-QSDV-RLLA-AGKVPQRAGEVERDLDKAD 178 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHTT-TTCCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhh-hhcc-hhHHHHHHHHHHHHHHHHH
Confidence 9999999888877766651 34799999999999999999888 3333 2222 2233567999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 137 PVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRRL 183 (303)
Q Consensus 137 ~~v~~l~~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~~ 183 (303)
.+|..+...++.|...+||+++.|..++..|..+|..|...+..|..
T Consensus 179 ~~i~~l~~~a~~L~~~~y~~a~~i~~r~~~l~~~w~~L~~~~~~r~~ 225 (235)
T 2odv_A 179 SMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRLK 225 (235)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987765
No 47
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.15 E-value=3e-10 Score=88.70 Aligned_cols=84 Identities=17% Similarity=0.275 Sum_probs=75.6
Q ss_pred hHHHHHHHHHHHHhHHHhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChh---H
Q psy10634 219 LIFQFYAEVAEAEVWLKEKKPILHS-SDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSK---N 294 (303)
Q Consensus 219 ~~~qF~~d~~e~~~WL~e~~~~l~s-~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~---~ 294 (303)
.+..|+.+++++..||.+++..+.+ .++|.|+..++.++++|+.|+.+|..++..|..+...|+.|+..+|++++ .
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~ 82 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFE 82 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH
Confidence 3556999999999999999998876 67899999999999999999999999999999999999999999988654 5
Q ss_pred HHHHhhhc
Q psy10634 295 ISKKQVNT 302 (303)
Q Consensus 295 I~~~~~~~ 302 (303)
|+.+++.|
T Consensus 83 i~~~l~~l 90 (118)
T 3uul_A 83 IQEQMTLL 90 (118)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887764
No 48
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.14 E-value=2.9e-10 Score=88.78 Aligned_cols=84 Identities=15% Similarity=0.274 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHHhHHHhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCh---hH
Q psy10634 219 LIFQFYAEVAEAEVWLKEKKPILHS-SDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDS---KN 294 (303)
Q Consensus 219 ~~~qF~~d~~e~~~WL~e~~~~l~s-~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~---~~ 294 (303)
.+.+|..+++++..||.+++..+.+ .++|.|+..++.++++|+.|+.+|..++..|..+...|+.|+..+|+++ +.
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~ 82 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETE 82 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 4567999999999999999998875 6789999999999999999999999999999999999999999998764 46
Q ss_pred HHHHhhhc
Q psy10634 295 ISKKQVNT 302 (303)
Q Consensus 295 I~~~~~~~ 302 (303)
|..+++.|
T Consensus 83 i~~~l~~l 90 (119)
T 3uun_A 83 VQEQMNLL 90 (119)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887765
No 49
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=98.58 E-value=1.3e-06 Score=68.98 Aligned_cols=113 Identities=13% Similarity=0.233 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhcccCCCCCHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhh--
Q psy10634 74 IRRDNLEDALLLYQYLRDVDDEMQWLLEKEPLAVSTDLGNSLTAVQSLQKKHQALETELASREPVVSALASRAKQMSR-- 151 (303)
Q Consensus 74 ~R~~~Le~~~~l~~f~~~~~~~~~Wl~e~e~~~~~~d~g~~l~~v~~l~~~h~~~~~el~~~~~~v~~l~~~g~~L~~-- 151 (303)
.|..++++ ..-.|-..+..+-.|+.+.++-+..+-..+++.+|+.++..|+.|..++...+..++.+...+..|-.
T Consensus 5 ~~le~id~--L~leFAKrAa~fNnW~e~A~EdL~D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~~~ 82 (129)
T 1wlx_A 5 KQLEAIDQ--LHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIA 82 (129)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--HHHHHHHHhHHHHHHHHhHHHHhccchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445554 23499999999999999999999977777999999999999999999999999999998766665543
Q ss_pred -cCCC------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 152 -SAHF------AAARIEGATSALQDKLASLRNAASVRRLRLLDALE 190 (303)
Q Consensus 152 -~~h~------~~~~I~~~~~~L~~~W~~L~~l~~~r~~~L~~a~~ 190 (303)
+.+. ....|. ++.|...|..+.+++..|...|.+...
T Consensus 83 ~~~~~~~~~~npYT~it--~~~l~~~W~~l~~li~~Rd~~Lq~E~~ 126 (129)
T 1wlx_A 83 ESNHIKLSGSNPYTTVT--PQIINSKWEKVQQLVPKRDHALLEEQS 126 (129)
T ss_dssp HHSCCCCSSSCSSCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCcCCCCCCCCccch--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 111222 788999999999999999999987653
No 50
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=98.11 E-value=4.3e-05 Score=60.32 Aligned_cols=71 Identities=10% Similarity=0.119 Sum_probs=62.1
Q ss_pred hhhhhHHHHHHHHHHHHhHHHhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy10634 215 KHSLLIFQFYAEVAEAEVWLKEKKPILHSSDFGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLL 285 (303)
Q Consensus 215 ~~~~~~~qF~~d~~e~~~WL~e~~~~l~s~~~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~ 285 (303)
++...|..|.+.|..+..||..++..|..+..+.++..++.|+..|+.|+.++...+..++++...++.|-
T Consensus 9 ~id~L~leFAKrAa~fNnW~e~A~EdL~D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~ 79 (129)
T 1wlx_A 9 AIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQ 79 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHhHHHHhccchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 34445667999999999999999999998888999999999999999999999999988888865555554
No 51
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=51.30 E-value=26 Score=25.48 Aligned_cols=21 Identities=14% Similarity=0.188 Sum_probs=10.2
Q ss_pred HHHHHHHHHhHHHhhhhhhcC
Q psy10634 223 FYAEVAEAEVWLKEKKPILHS 243 (303)
Q Consensus 223 F~~d~~e~~~WL~e~~~~l~s 243 (303)
|-........||.+.+..|.+
T Consensus 17 fe~rL~~Yr~~IeelE~~L~s 37 (93)
T 3t98_B 17 FEVQLQQYRQQIEELENHLAT 37 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 444444444555555555554
No 52
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=39.55 E-value=1.2e+02 Score=24.57 Aligned_cols=53 Identities=9% Similarity=0.059 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCChhHHHHHhhh
Q psy10634 249 DEDSVLSLIKKLESLERELVSFQHTVGHLSKLCQSLLDRNHFDSKNISKKQVN 301 (303)
Q Consensus 249 d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L~~~~~~~~~~I~~~~~~ 301 (303)
+++.-+.+..-++.+..++....+.+.+....-+.|+....||+..|.+..++
T Consensus 69 T~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~a~~~DeakI~aL~~E 121 (175)
T 3lay_A 69 TTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTASSPDTAKINAVAKE 121 (175)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 45555555555666777777788888888888899998889999999887654
No 53
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=36.50 E-value=1.2e+02 Score=29.09 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10634 255 SLIKKLESLERELVSFQHTVGHLSKLCQSL 284 (303)
Q Consensus 255 ~ll~~h~~le~el~~~~~~v~~L~~~~~~L 284 (303)
.|-+++..++..|...-.+|..|+..-+.+
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq 143 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQ 143 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555555555555444443
No 54
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=27.80 E-value=1e+02 Score=18.51 Aligned_cols=31 Identities=23% Similarity=0.447 Sum_probs=22.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 247 GRDEDSVLSLIKKLESLERELVSFQHTVGHL 277 (303)
Q Consensus 247 g~d~~~~~~ll~~h~~le~el~~~~~~v~~L 277 (303)
|-+++.+..+-..++++++.+.+.+..+.+|
T Consensus 16 gfspeelaaleselqalekklaalksklqal 46 (48)
T 1g6u_A 16 GFSPEELAALESELQALEKKLAALKSKLQAL 46 (48)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678777777777777777777777766655
No 55
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=26.81 E-value=1.1e+02 Score=18.72 Aligned_cols=32 Identities=19% Similarity=0.349 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10634 253 VLSLIKKLESLERELVSFQHTVGHLSKLCQSL 284 (303)
Q Consensus 253 ~~~ll~~h~~le~el~~~~~~v~~L~~~~~~L 284 (303)
+..+-.+|+.+++.|...+.++..|...-+.|
T Consensus 11 vsel~~r~e~LE~Ri~~LE~KLd~L~~~l~aL 42 (43)
T 2pnv_A 11 ISDLNERSEDFEKRIVTLETKLETLIGSIHAL 42 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44667889999999999999999988765543
No 56
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=24.72 E-value=2.7e+02 Score=22.38 Aligned_cols=58 Identities=9% Similarity=0.042 Sum_probs=38.3
Q ss_pred HHHHHHHHhchHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 125 HQALETELASREPVVSALASRAKQMSRSAHFAAARIEGATSALQDKLASLRNAASVRR 182 (303)
Q Consensus 125 h~~~~~el~~~~~~v~~l~~~g~~L~~~~h~~~~~I~~~~~~L~~~W~~L~~l~~~r~ 182 (303)
++.+..+.......+......-+.|+....|+...|++...++...-..+...-..-.
T Consensus 80 ~~e~r~~~~~Lr~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~qL~~~R~k~~ 137 (175)
T 3lay_A 80 YDDYYTQTSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKLDEQRVKRD 137 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555566666666778888889999998888887776665555443333
No 57
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=24.15 E-value=1.9e+02 Score=20.30 Aligned_cols=58 Identities=14% Similarity=0.181 Sum_probs=43.7
Q ss_pred HHHHHHHHHhHHHhhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10634 223 FYAEVAEAEVWLKEKKPILHSSD-FGRDEDSVLSLIKKLESLERELVSFQHTVGHLSKL 280 (303)
Q Consensus 223 F~~d~~e~~~WL~e~~~~l~s~~-~g~d~~~~~~ll~~h~~le~el~~~~~~v~~L~~~ 280 (303)
.-.....++.=+...+..|..|+ |..|...+..+..++..++.++.....+=..|...
T Consensus 27 le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erWeeLe~~ 85 (89)
T 2lw1_A 27 LPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERWEYLEAL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555666666666667777776 46799999999999999999999888776666443
No 58
>1txp_A HnRNP C, heterogeneous nuclear ribonucleoprotein C protein; antiparallel four helix coiled coil tetramer HNRNPC, signaling protein; NMR {Homo sapiens}
Probab=23.52 E-value=1e+02 Score=17.01 Aligned_cols=24 Identities=17% Similarity=0.385 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q psy10634 261 ESLERELVSFQHTVGHLSKLCQSL 284 (303)
Q Consensus 261 ~~le~el~~~~~~v~~L~~~~~~L 284 (303)
+++++++...+..|++|..+-+.+
T Consensus 2 Q~IkkELtQIK~kvDsLLe~Le~~ 25 (28)
T 1txp_A 2 QAIKKELTQIKQKVDSLLENLEKI 25 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhh
Confidence 567888999999999998876554
No 59
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=21.96 E-value=1.4e+02 Score=18.16 Aligned_cols=31 Identities=26% Similarity=0.474 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy10634 255 SLIKKLESLERELVSFQHTVGHLSKLCQSLL 285 (303)
Q Consensus 255 ~ll~~h~~le~el~~~~~~v~~L~~~~~~L~ 285 (303)
.|+.+...+..+|...+..|..++.+-..|-
T Consensus 6 ~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLe 36 (42)
T 2l5g_B 6 ELIQNMDRVDREITMVEQQISKLKKKQQQLE 36 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788889999999999999999988877664
Done!