RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10638
(140 letters)
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 77
Score = 79.1 bits (195), Expect = 3e-21
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 24 SPSSCSSSSSKSKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWF 83
+P++ + +++ R +T Q LE EF Y+ R +A LNLTE QVK+WF
Sbjct: 2 NPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWF 61
Query: 84 QNRRIKWRKQHLEFQQ 99
QNRR+K +K + + +
Sbjct: 62 QNRRMKMKKINKDRAK 77
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 88
Score = 77.0 bits (189), Expect = 3e-20
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 18 LKCKKLSPSSCSSSSS---KSKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNL 74
+K K+ P + S +RT FT QL LE EF +Y+ R+ +A TL L
Sbjct: 7 MKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLEL 66
Query: 75 TEAQVKVWFQNRRIKWRKQHLE 96
E QVK+WFQNRR+K +K+ E
Sbjct: 67 NETQVKIWFQNRRMKQKKRERE 88
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 68
Score = 76.4 bits (188), Expect = 3e-20
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 36 KRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQHL 95
+R RT FT EQ+E LE EFER Y R LA ++L EA+++VWF NRR KWR++
Sbjct: 2 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEK 61
Query: 96 EFQQQR 101
Q+R
Sbjct: 62 LRNQRR 67
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 56
Score = 74.0 bits (182), Expect = 2e-19
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 39 RTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQH 94
R +T Q LE EF +Y+ R+ +AH L+LTE Q+K+WFQNRR+KW+K++
Sbjct: 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKEN 56
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 58
Score = 72.2 bits (177), Expect = 1e-18
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 36 KRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRK 92
++ R ++ QL LE E+ +++ +R ++ +L+E Q+ +WFQNRR+K +K
Sbjct: 2 RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKK 58
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 66
Score = 72.2 bits (177), Expect = 1e-18
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 34 KSKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQ 93
K+ RVRT+ +QL L + + L L+ ++VWFQN+R K +K+
Sbjct: 2 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 61
Query: 94 HLEFQ 98
+ +
Sbjct: 62 SIMMK 66
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 71.8 bits (176), Expect = 1e-18
Identities = 29/57 (50%), Positives = 37/57 (64%)
Query: 36 KRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRK 92
K + F+ +Q LE +FE Q+Y+ PER LA L L+E QVK WFQNRR KWR+
Sbjct: 1 KGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 57
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 53
Score = 69.5 bits (170), Expect = 9e-18
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 37 RVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIK 89
R RT F+ EQL RL+ EF +Y+ R L+ L L EAQ+K+WFQN R K
Sbjct: 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNARAK 53
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 58
Score = 69.9 bits (171), Expect = 9e-18
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 36 KRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRK 92
++ RT FT QL LE +F ++QY+ ER + +L+LTE QVK+WFQNRR K ++
Sbjct: 1 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 57
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 57
Score = 69.2 bits (169), Expect = 2e-17
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 37 RVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQ 93
R RT FT +QL RLE EF ++ Y+ P R LA LNL E+ +KVWFQNRR+K ++Q
Sbjct: 1 RYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKRQ 57
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 65
Score = 69.2 bits (169), Expect = 2e-17
Identities = 33/61 (54%), Positives = 40/61 (65%)
Query: 34 KSKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQ 93
K +R RT F+ QL+ LE FER QY R LA NLTEA+++VWFQNRR + RKQ
Sbjct: 1 KQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQ 60
Query: 94 H 94
H
Sbjct: 61 H 61
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 77
Score = 68.5 bits (167), Expect = 5e-17
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 27 SCSSSSSKSKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNR 86
+ +K ++ R +FT Q LE F +Q+Y+ PER +LA + LT QVK+WFQN
Sbjct: 1 ASDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNH 60
Query: 87 RIKWRKQHLE 96
R K ++ E
Sbjct: 61 RYKTKRAQNE 70
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 67
Score = 67.3 bits (164), Expect = 1e-16
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 36 KRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQHL 95
+R RT FT Q+ LE F + +Y+ P L+ L L AQVK+WF+NRR + + Q
Sbjct: 2 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSD 61
Query: 96 EFQQQ 100
+ + Q
Sbjct: 62 QHKDQ 66
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 68
Score = 66.1 bits (161), Expect = 3e-16
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 36 KRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQHL 95
++ R +F+ Q+ LE F++Q+Y+ PER +LA ++LT QVK+WFQN R K ++Q
Sbjct: 3 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAK 62
Query: 96 EFQQQR 101
+ Q+
Sbjct: 63 DKAAQQ 68
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 50
Score = 63.3 bits (154), Expect = 3e-15
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 39 RTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRR 87
R +FT Q L A F+ + ++ ++ L L + V +F N R
Sbjct: 2 RLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNAR 50
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 63.8 bits (155), Expect = 3e-15
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 35 SKRVRTIFTPEQLERLEAEFE---RQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWR 91
++R R F + E L F Y + LA +T +QV WF N+RI+++
Sbjct: 1 ARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYK 60
Query: 92 KQHLEFQQQ 100
K +FQ++
Sbjct: 61 KNIGKFQEE 69
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 58
Score = 61.8 bits (150), Expect = 1e-14
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 37 RVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQ 93
+ RT + + LE F E + +A LNL + V+VWF NRR + ++
Sbjct: 1 KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRV 57
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 60
Score = 61.5 bits (149), Expect = 2e-14
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 36 KRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQ 93
+R RT FT +QL++LEA F+R +Y R +A NLTEA+V+VWF+NRR KWRK+
Sbjct: 2 RRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR 59
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 53
Score = 61.1 bits (148), Expect = 2e-14
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 39 RTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWR 91
++ +P+ LE F R+Q + E+ +A +T QV+VWF N+R++ +
Sbjct: 1 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 53
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 72
Score = 61.5 bits (149), Expect = 2e-14
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 36 KRVRTIFTPEQLERLEAEFER-QQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQH 94
T +Q+E LE F + ++ +A LTE Q + WF+ R +WR+
Sbjct: 2 SEGAATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLAEWRRSE 61
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1
(Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 61.6 bits (149), Expect = 3e-14
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 21/87 (24%)
Query: 37 RVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLN---------------LTEAQVKV 81
R + E L +E+ F QY +R +A+ N +T +V
Sbjct: 2 GSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYN 61
Query: 82 WFQNRRIKWRKQHLEFQQQRLAAIKQS 108
WF NRR + ++ + +AAI +S
Sbjct: 62 WFANRRKEIKR------RANIAAILES 82
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 61.2 bits (148), Expect = 4e-14
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 24 SPSSCSSSSSKSKRVRTIFTPEQLERLEAEFERQ----QYMVGPERLYLAHTLNLTEAQV 79
S S+ SSS +KR RT FT EQ E++ A ER Q + +
Sbjct: 6 SGSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVL 65
Query: 80 KVWFQNRRIKWRKQ 93
K+W N +
Sbjct: 66 KIWMHNNKNSGPSS 79
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 60.5 bits (146), Expect = 6e-14
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 30 SSSSKSKRVRTIFTPEQLERLEAEFER-QQYMVGPERLYLAHTLNLTEAQVKVWFQNRRI 88
SS S R RT + E L L++ Y L+ L+L + + +FQN+R
Sbjct: 2 SSGSSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRY 61
Query: 89 KWRKQ 93
+
Sbjct: 62 HVKHS 66
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 56.9 bits (137), Expect = 1e-12
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 30 SSSSKSKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIK 89
+ KR RT LE F + + ++A+ L L + V+VWF NRR K
Sbjct: 3 TLVQARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDVVRVWFCNRRQK 62
Query: 90 WRKQ 93
++
Sbjct: 63 GKRS 66
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 56.3 bits (136), Expect = 2e-12
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 36 KRVRTIFTPEQLERLEAEFERQQ---YMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRK 92
K R + + + + Y E+ +A NLT QV WF N R + +
Sbjct: 3 KNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQ 62
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6,
LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 52
Score = 55.9 bits (135), Expect = 2e-12
Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 43 TPEQLERLEAEFERQ-QYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRK 92
T + LE F ++ L+ L+ ++ WF+ RR + +
Sbjct: 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 51
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1)
{Rat (Rattus rattus) [TaxId: 10117]}
Length = 78
Score = 56.3 bits (135), Expect = 3e-12
Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 21/77 (27%)
Query: 39 RTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLN---------------------LTEA 77
R + P + L +ERQ+ ER L N +TE
Sbjct: 1 RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEV 60
Query: 78 QVKVWFQNRRIKWRKQH 94
+V WF NRR + +H
Sbjct: 61 RVYNWFANRRKEEAFRH 77
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 55.7 bits (134), Expect = 3e-12
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 39 RTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRKQH 94
RT LE F Q + +A LN+ + ++VWF NRR K ++ +
Sbjct: 2 RTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKRIN 57
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 60
Score = 55.6 bits (134), Expect = 3e-12
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 42 FTPEQLERLEAEFERQQ---YMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRK 92
FT E + LE+ F + Y+ L +L+ Q+K W NRR K +
Sbjct: 5 FTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKT 58
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5,
LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 59
Score = 53.6 bits (129), Expect = 2e-11
Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 37 RVRTIFTPEQLERLEAEFERQ-QYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWR 91
+ + E + LE F +Y L+ L+ + +++ WF++RR + +
Sbjct: 3 KDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLDWSVRKIQCWFRHRRNQDK 58
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1,
ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 51.3 bits (122), Expect = 2e-10
Identities = 14/72 (19%), Positives = 25/72 (34%)
Query: 33 SKSKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRK 92
+ + T EQL L+A F + E L LT ++ WF ++
Sbjct: 2 DFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKAL 61
Query: 93 QHLEFQQQRLAA 104
+ + + A
Sbjct: 62 KEEKMEIDESNA 73
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez
{Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 46.3 bits (109), Expect = 2e-08
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 32 SSKSKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWR 91
SS S R T EQL L++ F + Q+ + L L ++ WF + R +
Sbjct: 2 SSGSSGKR--KTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRYALK 59
Query: 92 KQHLEFQQQR 101
L++ +
Sbjct: 60 HGQLKWFRDN 69
>d2v4jb3 d.134.1.1 (B:136-208,B:278-381) Dissimilatory sulfite
reductase subunit beta, DsrB {Desulfovibrio vulgaris
[TaxId: 881]}
Length = 177
Score = 26.6 bits (58), Expect = 0.94
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Query: 46 QLERLEAEFERQQYMVGPERLYLAHTLNLTEAQVKVWFQNRRIKWRK-QHLEF 97
+ ERL ER +G ER + L + + + WR+ +F
Sbjct: 129 KYERLGEWAER----IGWERFFSLTGLEFSHHLIDDFRDPAYYTWRQSTQFKF 177
>d1ls6a_ c.37.1.5 (A:) Aryl sulfotransferase sult1a {Human (Homo
sapiens) [TaxId: 9606]}
Length = 288
Score = 25.1 bits (54), Expect = 3.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 39 RTIFTPEQLERLEAEFERQ 57
+T FT Q ER +A++ +
Sbjct: 258 KTTFTVAQNERFDADYAEK 276
>d3bfxa1 c.37.1.5 (A:12-296) Sulfotransferase Sult1c2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 25.1 bits (54), Expect = 3.5
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 39 RTIFTPEQLERLEAEFERQ 57
+ FT Q ER + + R+
Sbjct: 255 KNHFTVAQNERFDEIYRRK 273
>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase,
N-terminal domain {Azospirillum brasilense [TaxId: 192]}
Length = 422
Score = 25.3 bits (55), Expect = 3.5
Identities = 8/42 (19%), Positives = 21/42 (50%)
Query: 18 LKCKKLSPSSCSSSSSKSKRVRTIFTPEQLERLEAEFERQQY 59
+K ++++ S S++S + +F EQL + +++
Sbjct: 159 VKGEQINDFYICSLSARSIIYKGMFLAEQLTTFYPDLLDERF 200
>d2z5fa_ c.37.1.5 (A:) Thyroid hormone sulfotransferase Sult1b1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 24.8 bits (53), Expect = 4.2
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 39 RTIFTPEQLERLEAEFERQ 57
+ FT Q E+ +A +E +
Sbjct: 263 KNYFTVAQNEKFDAIYETE 281
>d1q20a_ c.37.1.5 (A:) Cholesterol sulfotransferase sult2b1b {Human
(Homo sapiens) [TaxId: 9606]}
Length = 294
Score = 24.9 bits (53), Expect = 4.2
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 39 RTIFTPEQLERLEAEFERQ 57
+ FT Q E + + +Q
Sbjct: 265 KNHFTVAQSEAFDRAYRKQ 283
>d1j99a_ c.37.1.5 (A:) Hydroxysteroid sulfotransferase sult2a1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 24.4 bits (52), Expect = 5.5
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 39 RTIFTPEQLERLEAEFERQ 57
+ FT Q E + F+ +
Sbjct: 254 KNHFTVAQAEDFDKLFQEK 272
>d1g3ma_ c.37.1.5 (A:) Estrogen sulfotransferase (STE, sult1e1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 290
Score = 24.4 bits (52), Expect = 6.5
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 39 RTIFTPEQLERLEAEFERQ 57
+ FT E+ + +E+Q
Sbjct: 262 KNHFTVALNEKFDKHYEQQ 280
>d1q44a_ c.37.1.5 (A:) Putative steroid sulfotransferase rarO47
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 320
Score = 24.0 bits (51), Expect = 7.5
Identities = 3/19 (15%), Positives = 7/19 (36%)
Query: 39 RTIFTPEQLERLEAEFERQ 57
R + E ++ E +
Sbjct: 293 RDTLSESLAEEIDRTIEEK 311
>d1fmja_ c.37.1.5 (A:) Retinol dehydratase {Fall armyworm
(Spodoptera frugiperda) [TaxId: 7108]}
Length = 342
Score = 24.2 bits (51), Expect = 7.6
Identities = 4/19 (21%), Positives = 7/19 (36%)
Query: 39 RTIFTPEQLERLEAEFERQ 57
R F E ++ E +
Sbjct: 313 RDYFDEEMTKQAEKWIKDN 331
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.125 0.353
Gapped
Lambda K H
0.267 0.0654 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 473,569
Number of extensions: 19361
Number of successful extensions: 133
Number of sequences better than 10.0: 1
Number of HSP's gapped: 121
Number of HSP's successfully gapped: 56
Length of query: 140
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 63
Effective length of database: 1,350,386
Effective search space: 85074318
Effective search space used: 85074318
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (22.4 bits)