Query psy10640
Match_columns 242
No_of_seqs 166 out of 1417
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 23:40:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10640.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10640hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1efp_B ETF, protein (electron 100.0 7.1E-31 2.4E-35 233.1 17.4 150 29-225 60-210 (252)
2 1efv_B Electron transfer flavo 100.0 7.6E-31 2.6E-35 233.7 15.4 148 29-223 63-211 (255)
3 1o97_C Electron transferring f 100.0 3.2E-30 1.1E-34 230.3 14.7 150 29-226 61-213 (264)
4 1efv_B Electron transfer flavo 99.5 1.7E-15 5.7E-20 134.9 3.4 111 2-133 131-241 (255)
5 1efp_B ETF, protein (electron 99.5 2.4E-15 8.3E-20 133.4 3.9 111 2-133 128-238 (252)
6 1o97_D Electron transferring f 99.5 4E-14 1.4E-18 129.6 8.7 120 30-203 39-163 (320)
7 1efv_A Electron transfer flavo 99.4 1.5E-13 5E-18 125.7 8.7 120 30-204 36-159 (315)
8 1o97_C Electron transferring f 99.4 3.8E-14 1.3E-18 126.5 4.3 123 2-154 127-258 (264)
9 3ih5_A Electron transfer flavo 99.3 1.4E-12 4.7E-17 113.1 8.0 123 31-205 43-180 (217)
10 1efp_A ETF, protein (electron 99.3 2.1E-12 7.3E-17 117.6 6.5 117 30-203 34-154 (307)
11 3fet_A Electron transfer flavo 99.2 8.6E-11 2.9E-15 98.3 9.5 98 48-203 43-142 (166)
12 3fet_A Electron transfer flavo 47.2 8 0.00027 31.6 1.8 26 4-29 83-108 (166)
13 3ih5_A Electron transfer flavo 28.2 30 0.001 29.2 2.4 25 4-28 105-129 (217)
14 2ixd_A LMBE-related protein; h 26.9 1.8E+02 0.0061 24.7 7.2 52 35-88 52-103 (242)
15 1efv_A Electron transfer flavo 25.2 30 0.001 31.1 2.0 25 4-28 100-124 (315)
16 1o97_D Electron transferring f 22.8 29 0.001 31.2 1.4 25 4-28 101-125 (320)
17 1efp_A ETF, protein (electron 22.8 32 0.0011 30.8 1.7 25 4-28 96-120 (307)
18 2qt7_A Receptor-type tyrosine- 20.8 1.3E+02 0.0045 22.9 4.5 31 144-175 20-50 (91)
No 1
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=99.97 E-value=7.1e-31 Score=233.14 Aligned_cols=150 Identities=51% Similarity=0.730 Sum_probs=140.4
Q ss_pred ccccCcchHHHHHHHHHHcCCCeEEEEeecCCCc-CCCCHHHHHHHHHHHHHhcCCCcchhhhhhhcCCCcceeCCCCCC
Q psy10640 29 KSQQHTITQRETIRTALAMGADRGIHVEVSGPEY-ETLQPFHISKILAKVAQEEKVDMVIVGKQKAKKKPIKKVSPKDMG 107 (242)
Q Consensus 29 ~~~~~~~~a~e~Lr~aLa~GaD~~~~v~~~~~~~-~~~~p~~~A~vLa~~i~~~~yd~iL~gImkAKKKpIe~vslaDLg 107 (242)
..++|+..+++.+|++++||||++++++. ++.| ++.||..+|++|++++++..||++|.|..
T Consensus 60 av~~G~~~a~~~lr~ala~GaD~vi~v~~-d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~---------------- 122 (252)
T 1efp_B 60 AVSIGVKQAAETLRTALAMGADRAILVVA-ADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQ---------------- 122 (252)
T ss_dssp EEEEESGGGHHHHHHHHHHTCSEEEEEEC-CSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESC----------------
T ss_pred EEEeCChhHHHHHHHHHhcCCCEEEEEec-ChhhcccCCHHHHHHHHHHHHHhcCCCEEEEcCC----------------
Confidence 34788888999999999999999999942 6777 78999999999999999989999999998
Q ss_pred CCCcCceEEEEeeCCCCCCCceeecCccccccCCCCCchHHHHHHHhCCCcccceeEEEEeCCEEEEEEEeCCeEEEEEE
Q psy10640 108 VDTGAHIEIVTVEDPPVRQAGSIVPDVDTLAIDDDSNQTAQMTAAFLNWPQATFASKVDKTDGELTVKREIDGGLETIKV 187 (242)
Q Consensus 108 id~s~~vkv~~~~~P~~R~aG~ileda~~Lsld~~~~~~~~~LA~~L~~p~~t~~~~~~~~~~~~~v~r~~~~g~~~~~~ 187 (242)
++|++.++++++||++|||||+|++++++.+++.++++|++++|.+++++
T Consensus 123 ------------------------------s~d~~~~~v~p~lA~~L~~~~vt~v~~l~~~~~~~~v~R~i~gG~~~v~~ 172 (252)
T 1efp_B 123 ------------------------------AIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGGLQTIAV 172 (252)
T ss_dssp ------------------------------CTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred ------------------------------ccCCchhhHHHHHHHHhCCCccccEEEEEEcCCeEEEEEEcCCcEEEEEE
Confidence 78989999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEeCCCCCCCCCChHHHHhhcCccceeeeccc
Q psy10640 188 KLPAVISADLRLNEPRYATLPNIMKSQVFCGQILNQMK 225 (242)
Q Consensus 188 ~lPavis~~~~~~~pr~~~l~~i~~a~~~~~~~~~~~~ 225 (242)
++|+|+|++.+.|+||||||++||+|+++++++|+..+
T Consensus 173 ~~P~vvTv~~~~~~pR~~sl~~im~A~kk~i~~~~~~d 210 (252)
T 1efp_B 173 SLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAAD 210 (252)
T ss_dssp ESSEEEEECTTSCCCCCCCHHHHHHHTTSCEEEEEGGG
T ss_pred CCCEEEEEeCCCCCcCCCCHHHHHhhccCCeeEecHHH
Confidence 99999999999999999999999999999999997544
No 2
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=99.97 E-value=7.6e-31 Score=233.73 Aligned_cols=148 Identities=61% Similarity=0.929 Sum_probs=139.1
Q ss_pred ccccCcchHHHHHHHHHHcCCCeEEEEeecCCCc-CCCCHHHHHHHHHHHHHhcCCCcchhhhhhhcCCCcceeCCCCCC
Q psy10640 29 KSQQHTITQRETIRTALAMGADRGIHVEVSGPEY-ETLQPFHISKILAKVAQEEKVDMVIVGKQKAKKKPIKKVSPKDMG 107 (242)
Q Consensus 29 ~~~~~~~~a~e~Lr~aLa~GaD~~~~v~~~~~~~-~~~~p~~~A~vLa~~i~~~~yd~iL~gImkAKKKpIe~vslaDLg 107 (242)
..++|+..+++.||++++||||++++++. ++.| ++.||+.+|++|++++++..||++|.|..
T Consensus 63 av~~G~~~a~~~lr~ala~GaD~vi~v~~-d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G~~---------------- 125 (255)
T 1efv_B 63 AVSCGPAQCQETIRTALAMGADRGIHVEV-PPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQ---------------- 125 (255)
T ss_dssp EEEEESTTHHHHHHHHHHHTCSEEEEEEC-CHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESC----------------
T ss_pred EEEeCChhHHHHHHHHHhcCCCEEEEEec-ChhhcccCCHHHHHHHHHHHHHhcCCCEEEEeCc----------------
Confidence 34788888999999999999999999942 6667 78899999999999999989999999998
Q ss_pred CCCcCceEEEEeeCCCCCCCceeecCccccccCCCCCchHHHHHHHhCCCcccceeEEEEeCCEEEEEEEeCCeEEEEEE
Q psy10640 108 VDTGAHIEIVTVEDPPVRQAGSIVPDVDTLAIDDDSNQTAQMTAAFLNWPQATFASKVDKTDGELTVKREIDGGLETIKV 187 (242)
Q Consensus 108 id~s~~vkv~~~~~P~~R~aG~ileda~~Lsld~~~~~~~~~LA~~L~~p~~t~~~~~~~~~~~~~v~r~~~~g~~~~~~ 187 (242)
++|++.++++++||++|||||+|++++++.+++.++++|++++|.+++++
T Consensus 126 ------------------------------s~d~d~~~v~p~lA~~L~~~~vt~v~~l~~~~~~~~v~R~i~gG~~~v~~ 175 (255)
T 1efv_B 126 ------------------------------AIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRL 175 (255)
T ss_dssp ------------------------------CTTTCCCCHHHHHHHHHTCCEEEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred ------------------------------ccCCchhhHHHHHHHHhCCCcccceEEEEEcCCeEEEEEEcCCcEEEEEE
Confidence 78989999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEeCCCCCCCCCChHHHHhhcCccceeeec
Q psy10640 188 KLPAVISADLRLNEPRYATLPNIMKSQVFCGQILNQ 223 (242)
Q Consensus 188 ~lPavis~~~~~~~pr~~~l~~i~~a~~~~~~~~~~ 223 (242)
++|+|+|++.++|+||||||++||+|+++++++|+.
T Consensus 176 ~~P~VvTv~~~~~~pR~~sl~~im~A~kk~i~~~~~ 211 (255)
T 1efv_B 176 KLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKP 211 (255)
T ss_dssp ESSEEEEECGGGCCCCCCCHHHHHHTTTSCEEEECH
T ss_pred CCCEEEEEeCCCCCcCCCCHHHHHHhccCCeeEecH
Confidence 999999999999999999999999999999999974
No 3
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=99.97 E-value=3.2e-30 Score=230.32 Aligned_cols=150 Identities=29% Similarity=0.492 Sum_probs=131.0
Q ss_pred ccccCcchHHHHHHHHHHcCCCeEEEEeecCCCcCCCCHHHHHHHHHHHHHhcCCCcchhhhhhhcCCCcceeCCCCCCC
Q psy10640 29 KSQQHTITQRETIRTALAMGADRGIHVEVSGPEYETLQPFHISKILAKVAQEEKVDMVIVGKQKAKKKPIKKVSPKDMGV 108 (242)
Q Consensus 29 ~~~~~~~~a~e~Lr~aLa~GaD~~~~v~~~~~~~~~~~p~~~A~vLa~~i~~~~yd~iL~gImkAKKKpIe~vslaDLgi 108 (242)
..++|+..+++.+|++++||||+++++ +++.|++.||..+|++|++++++.+||++|.|-.
T Consensus 61 av~~G~~~~~~~lr~ala~GaD~vi~v--~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~----------------- 121 (264)
T 1o97_C 61 VVSVGPDRVDESLRKCLAKGADRAVRV--WDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQ----------------- 121 (264)
T ss_dssp EEEESCGGGHHHHHHHHHTTCSEEEEE--CCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESC-----------------
T ss_pred EEEeCchhHHHHHHHHHhcCCCEEEEE--cCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCC-----------------
Confidence 447888889999999999999999999 5778899999999999999999989999999998
Q ss_pred CCcCceEEEEeeCCCCCCCceeecCccccccCCCCCchHHHHHHHhCCCcccceeEEEE--eCCEEEEEEEeCCe-EEEE
Q psy10640 109 DTGAHIEIVTVEDPPVRQAGSIVPDVDTLAIDDDSNQTAQMTAAFLNWPQATFASKVDK--TDGELTVKREIDGG-LETI 185 (242)
Q Consensus 109 d~s~~vkv~~~~~P~~R~aG~ileda~~Lsld~~~~~~~~~LA~~L~~p~~t~~~~~~~--~~~~~~v~r~~~~g-~~~~ 185 (242)
++|++.++++++||++|||||+|++++++. +++.++++|++++| .+++
T Consensus 122 -----------------------------s~d~~~~~v~p~lA~~L~~~~vt~v~~l~~~~~~~~~~~~R~i~gG~~~~v 172 (264)
T 1o97_C 122 -----------------------------SSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVIRRELEGGMLQEV 172 (264)
T ss_dssp -----------------------------CTTTCCCCHHHHHHHHHTCCEEEEEEEEECCTTCSEEEEEEECGGGCEEEE
T ss_pred -----------------------------ccCCchhhHHHHHHHHhCCCcccceEEEEEecCCCeEEEEEEcCCCcEEEE
Confidence 788899999999999999999999999998 88999999999999 9999
Q ss_pred EEcCCeEEEEeCCCCCCCCCChHHHHhhcCccceeeecccC
Q psy10640 186 KVKLPAVISADLRLNEPRYATLPNIMKSQVFCGQILNQMKV 226 (242)
Q Consensus 186 ~~~lPavis~~~~~~~pr~~~l~~i~~a~~~~~~~~~~~~~ 226 (242)
++++|+|+|++.+.|+||||||++||+|+++++++|+..++
T Consensus 173 ~~~~P~vvTv~~~~~~pR~psl~~im~A~kk~i~~~~~~dl 213 (264)
T 1o97_C 173 EINCPAVLTIQLGINKPRYASLRGIKQAATKPIEEVSLADI 213 (264)
T ss_dssp EEESSCEEEECTTSSCCTTCC----------CCEEECTGGG
T ss_pred EECCCEEEEEeCCCCCcCCCCHHHHHHhccCCeeEecHHHc
Confidence 99999999999999999999999999999999999975443
No 4
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=99.54 E-value=1.7e-15 Score=134.88 Aligned_cols=111 Identities=23% Similarity=0.246 Sum_probs=86.7
Q ss_pred CCchhHHHHHHhCCcccccccceeeccccccCcchHHHHHHHHHHcCCCeEEEEeecCCCcCCCCHHHHHHHHHHHHHhc
Q psy10640 2 TGAFPSIWRQRQGIRQFTTSSSLSEAEKSQQHTITQRETIRTALAMGADRGIHVEVSGPEYETLQPFHISKILAKVAQEE 81 (242)
Q Consensus 2 t~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~a~e~Lr~aLa~GaD~~~~v~~~~~~~~~~~p~~~A~vLa~~i~~~ 81 (242)
|+.+++++|++||||++|.+.+++.+++. ...+ |.-..+...++++.+..-+.++ . ++++
T Consensus 131 ~~~v~p~lA~~L~~~~vt~v~~l~~~~~~----~~v~-------R~i~gG~~~v~~~~P~VvTv~~--------~-~~~p 190 (255)
T 1efv_B 131 CNQTGQMTAGFLDWPQGTFASQVTLEGDK----LKVE-------REIDGGLETLRLKLPAVVTADL--------R-LNEP 190 (255)
T ss_dssp CCCHHHHHHHHHTCCEEEEEEEEEEETTE----EEEE-------EEETTEEEEEEEESSEEEEECG--------G-GCCC
T ss_pred hhhHHHHHHHHhCCCcccceEEEEEcCCe----EEEE-------EEcCCcEEEEEECCCEEEEEeC--------C-CCCc
Confidence 57899999999999999999999876542 2222 3333334445555443333333 1 4567
Q ss_pred CCCcchhhhhhhcCCCcceeCCCCCCCCCcCceEEEEeeCCCCCCCceeecC
Q psy10640 82 KVDMVIVGKQKAKKKPIKKVSPKDMGVDTGAHIEIVTVEDPPVRQAGSIVPD 133 (242)
Q Consensus 82 ~yd~iL~gImkAKKKpIe~vslaDLgid~s~~vkv~~~~~P~~R~aG~iled 133 (242)
|| ++|+|||+||||||++|+++|||++.++++++.++++|++|+.|.++++
T Consensus 191 R~-~sl~~im~A~kk~i~~~~~~dl~~~~~~~~~v~~~~~p~~~~~~~~i~~ 241 (255)
T 1efv_B 191 RY-ATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGVKVET 241 (255)
T ss_dssp CC-CCHHHHHHTTTSCEEEECHHHHTCCCCCSEEEEEEECCCCCCCCEECSS
T ss_pred CC-CCHHHHHHhccCCeeEecHHHcCCCCCCCeEEEEEecCCCCcCCEEECC
Confidence 99 9999999999999999999999999999999999999999999998754
No 5
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=99.53 E-value=2.4e-15 Score=133.37 Aligned_cols=111 Identities=25% Similarity=0.255 Sum_probs=84.9
Q ss_pred CCchhHHHHHHhCCcccccccceeeccccccCcchHHHHHHHHHHcCCCeEEEEeecCCCcCCCCHHHHHHHHHHHHHhc
Q psy10640 2 TGAFPSIWRQRQGIRQFTTSSSLSEAEKSQQHTITQRETIRTALAMGADRGIHVEVSGPEYETLQPFHISKILAKVAQEE 81 (242)
Q Consensus 2 t~~~~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~a~e~Lr~aLa~GaD~~~~v~~~~~~~~~~~p~~~A~vLa~~i~~~ 81 (242)
++.+++++|++||||++|.+.+++.+++. ...+ |.-..+...++++.+..-+.++ . ++++
T Consensus 128 ~~~v~p~lA~~L~~~~vt~v~~l~~~~~~----~~v~-------R~i~gG~~~v~~~~P~vvTv~~--------~-~~~p 187 (252)
T 1efp_B 128 MNATGQMLAAILGWAQATFASKVEIEGAK----AKVT-------REVDGGLQTIAVSLPAVVTADL--------R-LNEP 187 (252)
T ss_dssp CCCHHHHHHHHHTCEEEEEEEEEEECSSE----EEEE-------EEETTEEEEEEEESSEEEEECT--------T-SCCC
T ss_pred hhhHHHHHHHHhCCCccccEEEEEEcCCe----EEEE-------EEcCCcEEEEEECCCEEEEEeC--------C-CCCc
Confidence 57899999999999999999999876542 2222 3222333344444433322222 1 4567
Q ss_pred CCCcchhhhhhhcCCCcceeCCCCCCCCCcCceEEEEeeCCCCCCCceeecC
Q psy10640 82 KVDMVIVGKQKAKKKPIKKVSPKDMGVDTGAHIEIVTVEDPPVRQAGSIVPD 133 (242)
Q Consensus 82 ~yd~iL~gImkAKKKpIe~vslaDLgid~s~~vkv~~~~~P~~R~aG~iled 133 (242)
|| ++|+|||+||||||++|+++|||++..+++++.++++|++|+.|.++++
T Consensus 188 R~-~sl~~im~A~kk~i~~~~~~dl~~~~~~~~~v~~~~~p~~~~~~~~~~~ 238 (252)
T 1efp_B 188 RY-ASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGIKVGS 238 (252)
T ss_dssp CC-CCHHHHHHHTTSCEEEEEGGGGTCCCCCSEEEEEEECCCCCCCCEECSS
T ss_pred CC-CCHHHHHhhccCCeeEecHHHcCCCCCCCcEEEEEecCCCCcCcEEECC
Confidence 99 9999999999999999999999999889999999999999999988754
No 6
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=99.49 E-value=4e-14 Score=129.61 Aligned_cols=120 Identities=14% Similarity=0.093 Sum_probs=104.7
Q ss_pred cccCcchHHHHHHH-HHHcCCCeEEEEeecCCCcCCCCHHHHHHHHHHHHHhcCCCcchhhhhhhcCCCcceeCCCCCCC
Q psy10640 30 SQQHTITQRETIRT-ALAMGADRGIHVEVSGPEYETLQPFHISKILAKVAQEEKVDMVIVGKQKAKKKPIKKVSPKDMGV 108 (242)
Q Consensus 30 ~~~~~~~a~e~Lr~-aLa~GaD~~~~v~~~~~~~~~~~p~~~A~vLa~~i~~~~yd~iL~gImkAKKKpIe~vslaDLgi 108 (242)
..+|+. ++ .+++ ++++|+|+.+++ +++.| +.++..++++|++++++.+||++|.+-.
T Consensus 39 v~~G~~-~~-~~~~~a~a~GaDkv~~v--~d~~l-~~~~~~~a~~La~~i~~~~pdlVL~g~t----------------- 96 (320)
T 1o97_D 39 AVIGSQ-AD-AFVPALSVNGVDELVVV--KGSSI-DFDPDVFEASVSALIAAHNPSVVLLPHS----------------- 96 (320)
T ss_dssp EEESTT-GG-GGHHHHCBTTCSEEEEE--ECSCS-SCCHHHHHHHHHHHHHHHCCSEEEEECS-----------------
T ss_pred EEECCc-HH-HHHHHHHhcCCceEEEE--eCccc-CCCHHHHHHHHHHHHHhcCCCEEEEeCC-----------------
Confidence 466766 56 8898 889999999999 46778 8899999999999999999999999985
Q ss_pred CCcCceEEEEeeCCCCCCCceeecCccccccCCCCCchHHHHHHHhCCCcccceeEEEEeCCEEEEEEEeCCeE--EEEE
Q psy10640 109 DTGAHIEIVTVEDPPVRQAGSIVPDVDTLAIDDDSNQTAQMTAAFLNWPQATFASKVDKTDGELTVKREIDGGL--ETIK 186 (242)
Q Consensus 109 d~s~~vkv~~~~~P~~R~aG~ileda~~Lsld~~~~~~~~~LA~~L~~p~~t~~~~~~~~~~~~~v~r~~~~g~--~~~~ 186 (242)
+ ++ .++++++|++|+||++|++++++.+++.++++|.+.+|. .+++
T Consensus 97 -----------------------------s-~G--~~laprlAa~L~~~~vtdv~~l~~~~~~l~~~R~~~gG~~~~ti~ 144 (320)
T 1o97_D 97 -----------------------------V-DS--LGYASSLASKTGYGFATDVYIVEYQGDELVATRGGYNQKVNVEVD 144 (320)
T ss_dssp -----------------------------H-HH--HTTHHHHHHTSSCEEEEEECEEEEETTEEEEEEEETTTTEEEEEE
T ss_pred -----------------------------C-ch--hhHHHHHHHHhCCCccccEEEEEecCCeEEEEEEcCCCEEEEEEE
Confidence 2 33 699999999999999999999999887899999999995 4555
Q ss_pred Ec-C-CeEEEEeCCCCCCC
Q psy10640 187 VK-L-PAVISADLRLNEPR 203 (242)
Q Consensus 187 ~~-l-Pavis~~~~~~~pr 203 (242)
++ . |+|+|+..+.++|+
T Consensus 145 ~~~~~p~viTVr~~~f~~~ 163 (320)
T 1o97_D 145 FPGKSTVVLTIRPSVFKPL 163 (320)
T ss_dssp CTTCSCEEEEECTTSSCCC
T ss_pred ecCCCCEEEEEcCCCCCCC
Confidence 54 5 99999999999987
No 7
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=99.45 E-value=1.5e-13 Score=125.68 Aligned_cols=120 Identities=17% Similarity=0.107 Sum_probs=105.0
Q ss_pred cccCcchHHHHHHHH-HHcCCCeEEEEeecCCCcCCCCHHHHHHHHHHHHHhcCCCcchhhhhhhcCCCcceeCCCCCCC
Q psy10640 30 SQQHTITQRETIRTA-LAMGADRGIHVEVSGPEYETLQPFHISKILAKVAQEEKVDMVIVGKQKAKKKPIKKVSPKDMGV 108 (242)
Q Consensus 30 ~~~~~~~a~e~Lr~a-La~GaD~~~~v~~~~~~~~~~~p~~~A~vLa~~i~~~~yd~iL~gImkAKKKpIe~vslaDLgi 108 (242)
..+|+. +++.++++ +++|+|+.+++ +++.|++.++..++++|++++++.+||++|.+-.
T Consensus 36 v~~G~~-~~~~~~~a~~a~GaDkv~~v--~d~~l~~~~~~~~a~~La~li~~~~pdlVL~g~t----------------- 95 (315)
T 1efv_A 36 LVAGTK-CDKVAQDLCKVAGIAKVLVA--QHDVYKGLLPEELTPLILATQKQFNYTHICAGAS----------------- 95 (315)
T ss_dssp EEEESC-CHHHHHHHHHSTTCCEEEEE--ECGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESS-----------------
T ss_pred EEECCc-hHHHHHHHHHhcCCCEEEEe--cCchhccCCHHHHHHHHHHHHHhcCCCEEEEcCC-----------------
Confidence 466766 78899999 89999999999 5678888999999999999999999999999885
Q ss_pred CCcCceEEEEeeCCCCCCCceeecCccccccCCCCCchHHHHHHHhCCCcccceeEEEEeCCEEEEEEEeCCe--EEEEE
Q psy10640 109 DTGAHIEIVTVEDPPVRQAGSIVPDVDTLAIDDDSNQTAQMTAAFLNWPQATFASKVDKTDGELTVKREIDGG--LETIK 186 (242)
Q Consensus 109 d~s~~vkv~~~~~P~~R~aG~ileda~~Lsld~~~~~~~~~LA~~L~~p~~t~~~~~~~~~~~~~v~r~~~~g--~~~~~ 186 (242)
+ ++ .++++++|+.|+||++|++++++.++ +++|.+.+| ..+++
T Consensus 96 -----------------------------s-~G--~~laprlAa~L~~~~vtdv~~l~~~~---~~~R~~~gG~~~~tv~ 140 (315)
T 1efv_A 96 -----------------------------A-FG--KNLLPRVAAKLEVAPISDIIAIKSPD---TFVRTIYAGNALCTVK 140 (315)
T ss_dssp -----------------------------H-HH--HHHHHHHHHHHTCCCEEEECEEEETT---EEEEEETTTTEEEEEE
T ss_pred -----------------------------C-Cc--chHHHHHHHHhCCCccccEEEeccCC---EEEEEcCCCEEEEEEE
Confidence 2 33 69999999999999999999998866 899999999 56677
Q ss_pred Ec-CCeEEEEeCCCCCCCC
Q psy10640 187 VK-LPAVISADLRLNEPRY 204 (242)
Q Consensus 187 ~~-lPavis~~~~~~~pr~ 204 (242)
++ .|+|+|+..+.++|.-
T Consensus 141 ~~~~p~viTVr~~~f~~~~ 159 (315)
T 1efv_A 141 CDEKVKVFSVRGTSFDAAA 159 (315)
T ss_dssp ECCSSEEEEECGGGSCCCC
T ss_pred eCCCCeEEEEcCCCCCCCC
Confidence 74 7999999999888644
No 8
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=99.44 E-value=3.8e-14 Score=126.49 Aligned_cols=123 Identities=16% Similarity=0.179 Sum_probs=79.2
Q ss_pred CCchhHHHHHHhCCcccccccceee--ccccccCcchHHHHHHHHHHcCCCe-EEEEeecCCCcCCCCHHHHHHHHHHHH
Q psy10640 2 TGAFPSIWRQRQGIRQFTTSSSLSE--AEKSQQHTITQRETIRTALAMGADR-GIHVEVSGPEYETLQPFHISKILAKVA 78 (242)
Q Consensus 2 t~~~~~~~~~~~~~~~~t~~~~l~~--~~~~~~~~~~a~e~Lr~aLa~GaD~-~~~v~~~~~~~~~~~p~~~A~vLa~~i 78 (242)
|+.+++++|++||||++|.+.+++. +++. ...+ |.-..+ ...++++.+..-+.++ . +
T Consensus 127 ~~~v~p~lA~~L~~~~vt~v~~l~~~~~~~~----~~~~-------R~i~gG~~~~v~~~~P~vvTv~~--------~-~ 186 (264)
T 1o97_C 127 YASTGISVASYLNWPHAAVVADLQYKPGDNK----AVIR-------RELEGGMLQEVEINCPAVLTIQL--------G-I 186 (264)
T ss_dssp CCCHHHHHHHHHTCCEEEEEEEEECCTTCSE----EEEE-------EECGGGCEEEEEEESSCEEEECT--------T-S
T ss_pred hhhHHHHHHHHhCCCcccceEEEEEecCCCe----EEEE-------EEcCCCcEEEEEECCCEEEEEeC--------C-C
Confidence 5789999999999999999999987 5432 1222 222222 3344444443333322 1 4
Q ss_pred HhcCCCcchhhhhhhcCCCcceeCCCCCCCCC---c---CceEEEEeeCCCCCCCceeecCccccccCCCCCchHHHHHH
Q psy10640 79 QEEKVDMVIVGKQKAKKKPIKKVSPKDMGVDT---G---AHIEIVTVEDPPVRQAGSIVPDVDTLAIDDDSNQTAQMTAA 152 (242)
Q Consensus 79 ~~~~yd~iL~gImkAKKKpIe~vslaDLgid~---s---~~vkv~~~~~P~~R~aG~ileda~~Lsld~~~~~~~~~LA~ 152 (242)
.++|| ++|+|||+||||||++|+++|||+++ . +++++.+++.|++|+. .++ +++.++.+..|.+
T Consensus 187 ~~pR~-psl~~im~A~kk~i~~~~~~dl~~~~~~~~l~g~~~~v~~~~~p~~~~~-~~~--------~~~~~e~~~~l~~ 256 (264)
T 1o97_C 187 NKPRY-ASLRGIKQAATKPIEEVSLADIGLSANDVGAAQSMSRVRRMYIPEKGRA-TMI--------EGTISEQAAKIIQ 256 (264)
T ss_dssp SCCTT-CC----------CCEEECTGGGTCCGGGSSGGGSSSEEEEEECCCCCCC-EEC--------CSCHHHHHHHHHH
T ss_pred CCcCC-CCHHHHHHhccCCeeEecHHHcCcChhhccccCCCcEEEEEecCCCCcc-EEE--------CCChHHHHHHHHH
Confidence 56799 99999999999999999999999863 3 7899999999988887 665 3444677888888
Q ss_pred Hh
Q psy10640 153 FL 154 (242)
Q Consensus 153 ~L 154 (242)
+|
T Consensus 257 ~L 258 (264)
T 1o97_C 257 II 258 (264)
T ss_dssp HH
T ss_pred HH
Confidence 77
No 9
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=99.35 E-value=1.4e-12 Score=113.14 Aligned_cols=123 Identities=15% Similarity=0.119 Sum_probs=103.5
Q ss_pred ccCcchHHHHHHHHHHcCCCeEEEEeecCCCcCCCCHHHHHHHHHHHHHhcCCCcchhhhhhhcCCCcceeCCCCCCCCC
Q psy10640 31 QQHTITQRETIRTALAMGADRGIHVEVSGPEYETLQPFHISKILAKVAQEEKVDMVIVGKQKAKKKPIKKVSPKDMGVDT 110 (242)
Q Consensus 31 ~~~~~~a~e~Lr~aLa~GaD~~~~v~~~~~~~~~~~p~~~A~vLa~~i~~~~yd~iL~gImkAKKKpIe~vslaDLgid~ 110 (242)
.+|+. +++.+++++++|||+.+++ +++.|+..++..++++|++++++.+||++|.+-.
T Consensus 43 ~~G~~-~~~~~~~~~~~Gad~v~~v--~~~~~~~~~~~~~a~~l~~~i~~~~p~~Vl~g~t------------------- 100 (217)
T 3ih5_A 43 VAGTG-LKEIEKQILPYGVDKLHVF--DAEGLYPYTSLPHTSILVNLFKEEQPQICLMGAT------------------- 100 (217)
T ss_dssp EEESC-CTTTHHHHGGGTCSEEEEE--ECGGGSSCCHHHHHHHHHHHHHHHCCSEEEEECS-------------------
T ss_pred EECCC-HHHHHHHHHhcCCCEEEEe--cCcccccCCHHHHHHHHHHHHHhcCCCEEEEeCC-------------------
Confidence 44554 5678899999999999999 5678889999999999999999999999998864
Q ss_pred cCceEEEEeeCCCCCCCceeecCccccccCCCCCchHHHHHHHhCCCcccceeEEEEeCC-----------EEEEEEEeC
Q psy10640 111 GAHIEIVTVEDPPVRQAGSIVPDVDTLAIDDDSNQTAQMTAAFLNWPQATFASKVDKTDG-----------ELTVKREID 179 (242)
Q Consensus 111 s~~vkv~~~~~P~~R~aG~ileda~~Lsld~~~~~~~~~LA~~L~~p~~t~~~~~~~~~~-----------~~~v~r~~~ 179 (242)
..+ .+++++||..|+||+++.+++++.+++ .++++|.+.
T Consensus 101 ----------------------------~~G--~~laprlAa~L~~~~~sdv~~l~~~~~~~~~~~~~~~~~l~~~Rp~~ 150 (217)
T 3ih5_A 101 ----------------------------VIG--RDLGPRVSSALTSGLTADCTSLEIGDHEDKKEGKVYKNLLYQIRPAF 150 (217)
T ss_dssp ----------------------------HHH--HHHHHHHHHHTTCCCBCSCSEEEEEEEEETTTTEEEEEEEEEEEESS
T ss_pred ----------------------------cch--hhHHHHHHHHhCCCccceEEEEEecCCccccccccccccEEEEEECC
Confidence 223 589999999999999999999998654 599999999
Q ss_pred CeEE--EEEEc--CCeEEEEeCCCCCCCCC
Q psy10640 180 GGLE--TIKVK--LPAVISADLRLNEPRYA 205 (242)
Q Consensus 180 ~g~~--~~~~~--lPavis~~~~~~~pr~~ 205 (242)
+|.. +++++ .|+|+++..+..+|.-+
T Consensus 151 gG~~~ati~~~~~~p~v~TVr~~~f~~~~~ 180 (217)
T 3ih5_A 151 GGNIVATIVNPEHRPQMATVREGVMKKEIV 180 (217)
T ss_dssp SSSCEEEECCSSSSSEEEEECTTSSCCCCS
T ss_pred CCEEEEEEEecCCCCEEEEECCCCCCcCcC
Confidence 9964 55554 79999999988776543
No 10
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=99.30 E-value=2.1e-12 Score=117.60 Aligned_cols=117 Identities=14% Similarity=0.118 Sum_probs=99.4
Q ss_pred cccCcchHHHH-HHHHHHcCCCeEEEEeecCCCcCCCCHHHHHHHHHHHHHhcCCCcchhhhhhhcCCCcceeCCCCCCC
Q psy10640 30 SQQHTITQRET-IRTALAMGADRGIHVEVSGPEYETLQPFHISKILAKVAQEEKVDMVIVGKQKAKKKPIKKVSPKDMGV 108 (242)
Q Consensus 30 ~~~~~~~a~e~-Lr~aLa~GaD~~~~v~~~~~~~~~~~p~~~A~vLa~~i~~~~yd~iL~gImkAKKKpIe~vslaDLgi 108 (242)
..+|+. +++. .+.++++|+|+.+++ +++.|++.++..++++|+++ +.+||++|.+-.
T Consensus 34 v~~G~~-~~~~~~~~a~a~GaDkv~~v--~d~~l~~~~~~~~a~~La~~--~~~pd~VL~g~t----------------- 91 (307)
T 1efp_A 34 LCAGAS-AKAAAEEAAKIAGVAKVLVA--EDALYGHRLAEPTAALIVGL--AGDYSHIAAPAT----------------- 91 (307)
T ss_dssp EEEETT-CHHHHHHHHTSTTEEEEEEE--ECGGGTTCCHHHHHHHHHHH--HTTCSEEEEESS-----------------
T ss_pred EEECCc-hHHHHHHHHHhcCCCEEEEe--cCchhccCCHHHHHHHHHHH--ccCCCEEEEeCC-----------------
Confidence 466766 5555 668889999999999 56788899999999999997 558999999875
Q ss_pred CCcCceEEEEeeCCCCCCCceeecCccccccCCCCCchHHHHHHHhCCCcccceeEEEEeCCEEEEEEEeCCe--EEEEE
Q psy10640 109 DTGAHIEIVTVEDPPVRQAGSIVPDVDTLAIDDDSNQTAQMTAAFLNWPQATFASKVDKTDGELTVKREIDGG--LETIK 186 (242)
Q Consensus 109 d~s~~vkv~~~~~P~~R~aG~ileda~~Lsld~~~~~~~~~LA~~L~~p~~t~~~~~~~~~~~~~v~r~~~~g--~~~~~ 186 (242)
+ ++ .++++++|+.|+||++|++++++.++ +++|.+.+| ..+++
T Consensus 92 -----------------------------s-~G--~~laprlAa~L~~~~vtdv~~l~~~~---~~~R~~~gG~~~~tv~ 136 (307)
T 1efp_A 92 -----------------------------T-DA--KNVMPRVAALLDVMVLSDVSAILDAD---TFERPIYAGNAIQVVK 136 (307)
T ss_dssp -----------------------------H-HH--HHHHHHHHHHTTCCEEEEESEECSSS---EEEEEEGGGTEEEEEE
T ss_pred -----------------------------c-ch--hhHHHHHHHHhCCCccccEEEEccCC---EEEEECCCCEEEEEEE
Confidence 2 33 79999999999999999999998765 899999999 46677
Q ss_pred Ec-CCeEEEEeCCCCCCC
Q psy10640 187 VK-LPAVISADLRLNEPR 203 (242)
Q Consensus 187 ~~-lPavis~~~~~~~pr 203 (242)
++ +|+|+|+..+.++|.
T Consensus 137 ~~~~p~viTVr~~~f~~~ 154 (307)
T 1efp_A 137 SKDAKKVFTIRTASFDAA 154 (307)
T ss_dssp ECSSSEEEEECGGGSCCC
T ss_pred eCCCCEEEEEcCCCCCCC
Confidence 76 999999999988876
No 11
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=99.17 E-value=8.6e-11 Score=98.33 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=85.4
Q ss_pred CCCeEEEEeecCCCcCCCCHHHHHHHHHHHHHhcCCCcchhhhhhhcCCCcceeCCCCCCCCCcCceEEEEeeCCCCCCC
Q psy10640 48 GADRGIHVEVSGPEYETLQPFHISKILAKVAQEEKVDMVIVGKQKAKKKPIKKVSPKDMGVDTGAHIEIVTVEDPPVRQA 127 (242)
Q Consensus 48 GaD~~~~v~~~~~~~~~~~p~~~A~vLa~~i~~~~yd~iL~gImkAKKKpIe~vslaDLgid~s~~vkv~~~~~P~~R~a 127 (242)
|||+.++++ + +. ++..++++|+++++ +||++|.+--
T Consensus 43 Gad~v~~v~-~----~~-~~e~~a~~l~~~~~--~p~~Vl~g~t------------------------------------ 78 (166)
T 3fet_A 43 GSKVLYRAK-K----GT-PFDAVSEGILKIAG--NYDYIAIGST------------------------------------ 78 (166)
T ss_dssp CCSEEEEEC-T----TC-CHHHHHHHHHHHHT--TCSEEEEECS------------------------------------
T ss_pred CCCEEEEeC-C----CC-ChHHHHHHHHHHHc--CCCEEEEcCC------------------------------------
Confidence 999999995 2 22 57789999999887 8999998853
Q ss_pred ceeecCccccccCCCCCchHHHHHHHhCCCcccceeEEEEeCCEEEEEEEeCCeE--EEEEEcCCeEEEEeCCCCCCC
Q psy10640 128 GSIVPDVDTLAIDDDSNQTAQMTAAFLNWPQATFASKVDKTDGELTVKREIDGGL--ETIKVKLPAVISADLRLNEPR 203 (242)
Q Consensus 128 G~ileda~~Lsld~~~~~~~~~LA~~L~~p~~t~~~~~~~~~~~~~v~r~~~~g~--~~~~~~lPavis~~~~~~~pr 203 (242)
.++ .+++++||+.|+||++|++++++.+++.++++|.+.+|. +++++++| |+++..+.++|+
T Consensus 79 -----------~~g--~~vaprlAa~L~~~~~sdv~~l~~~~~~~~~~R~~~gG~~~~tv~~~~p-v~Tvr~~~f~~~ 142 (166)
T 3fet_A 79 -----------EVG--REIAGYLSFKTGFYTATEIFSLEFNGQKAHTKRFFYGGKTVIEEESDAR-ILTVAPGVIEAK 142 (166)
T ss_dssp -----------HHH--HHHHHHHHHHHCCCEEEEEEEEEESSSSEEEEEEEGGGTEEEEEEECCC-EEEECTTSSCCC
T ss_pred -----------Ccc--ccHHHHHHHHhCCCceeeEEEEEecCCEEEEEEEccCCEEEEEEEeCCC-EEEECCCCCCCC
Confidence 233 589999999999999999999999888999999999994 68999999 999999988854
No 12
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=47.18 E-value=8 Score=31.60 Aligned_cols=26 Identities=15% Similarity=0.059 Sum_probs=23.1
Q ss_pred chhHHHHHHhCCcccccccceeeccc
Q psy10640 4 AFPSIWRQRQGIRQFTTSSSLSEAEK 29 (242)
Q Consensus 4 ~~~~~~~~~~~~~~~t~~~~l~~~~~ 29 (242)
.+++.+|++||+|++|.|.+++.+++
T Consensus 83 ~vaprlAa~L~~~~~sdv~~l~~~~~ 108 (166)
T 3fet_A 83 EIAGYLSFKTGFYTATEIFSLEFNGQ 108 (166)
T ss_dssp HHHHHHHHHHCCCEEEEEEEEEESSS
T ss_pred cHHHHHHHHhCCCceeeEEEEEecCC
Confidence 47889999999999999999998754
No 13
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=28.17 E-value=30 Score=29.25 Aligned_cols=25 Identities=8% Similarity=-0.068 Sum_probs=22.1
Q ss_pred chhHHHHHHhCCcccccccceeecc
Q psy10640 4 AFPSIWRQRQGIRQFTTSSSLSEAE 28 (242)
Q Consensus 4 ~~~~~~~~~~~~~~~t~~~~l~~~~ 28 (242)
.+++.+|.+||+|++|.|.+++..+
T Consensus 105 ~laprlAa~L~~~~~sdv~~l~~~~ 129 (217)
T 3ih5_A 105 DLGPRVSSALTSGLTADCTSLEIGD 129 (217)
T ss_dssp HHHHHHHHHTTCCCBCSCSEEEEEE
T ss_pred hHHHHHHHHhCCCccceEEEEEecC
Confidence 4688999999999999999998754
No 14
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=26.91 E-value=1.8e+02 Score=24.68 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=38.4
Q ss_pred chHHHHHHHHHHcCCCeEEEEeecCCCcCCCCHHHHHHHHHHHHHhcCCCcchh
Q psy10640 35 ITQRETIRTALAMGADRGIHVEVSGPEYETLQPFHISKILAKVAQEEKVDMVIV 88 (242)
Q Consensus 35 ~~a~e~Lr~aLa~GaD~~~~v~~~~~~~~~~~p~~~A~vLa~~i~~~~yd~iL~ 88 (242)
.+..|..+.+-.+|++....+...|..+... ..+.+.|.+++++.++|.++.
T Consensus 52 ~R~~E~~~A~~~LGv~~~~~L~~~D~~~~~~--~~~~~~l~~~ir~~~PdvV~t 103 (242)
T 2ixd_A 52 LRKEEAKVAARIMGVKTRLNLAMPDRGLYMK--EEYIREIVKVIRTYKPKLVFA 103 (242)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEECTTCCCCC--HHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEECCCCCCCCCCh--HHHHHHHHHHHHHcCCCEEEE
Confidence 4566777777789999767777777666532 445678888899889988874
No 15
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=25.22 E-value=30 Score=31.11 Aligned_cols=25 Identities=0% Similarity=0.038 Sum_probs=22.4
Q ss_pred chhHHHHHHhCCcccccccceeecc
Q psy10640 4 AFPSIWRQRQGIRQFTTSSSLSEAE 28 (242)
Q Consensus 4 ~~~~~~~~~~~~~~~t~~~~l~~~~ 28 (242)
.+++.+|.+||+|++|.|.+++.++
T Consensus 100 ~laprlAa~L~~~~vtdv~~l~~~~ 124 (315)
T 1efv_A 100 NLLPRVAAKLEVAPISDIIAIKSPD 124 (315)
T ss_dssp HHHHHHHHHHTCCCEEEECEEEETT
T ss_pred hHHHHHHHHhCCCccccEEEeccCC
Confidence 4788999999999999999998765
No 16
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=22.81 E-value=29 Score=31.25 Aligned_cols=25 Identities=12% Similarity=0.056 Sum_probs=22.4
Q ss_pred chhHHHHHHhCCcccccccceeecc
Q psy10640 4 AFPSIWRQRQGIRQFTTSSSLSEAE 28 (242)
Q Consensus 4 ~~~~~~~~~~~~~~~t~~~~l~~~~ 28 (242)
.+++.+|.+||+|++|.|.+++.++
T Consensus 101 ~laprlAa~L~~~~vtdv~~l~~~~ 125 (320)
T 1o97_D 101 GYASSLASKTGYGFATDVYIVEYQG 125 (320)
T ss_dssp TTHHHHHHTSSCEEEEEECEEEEET
T ss_pred hHHHHHHHHhCCCccccEEEEEecC
Confidence 5789999999999999999998744
No 17
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=22.81 E-value=32 Score=30.81 Aligned_cols=25 Identities=8% Similarity=0.036 Sum_probs=22.3
Q ss_pred chhHHHHHHhCCcccccccceeecc
Q psy10640 4 AFPSIWRQRQGIRQFTTSSSLSEAE 28 (242)
Q Consensus 4 ~~~~~~~~~~~~~~~t~~~~l~~~~ 28 (242)
.+++.+|.+||+|++|.|.+++.++
T Consensus 96 ~laprlAa~L~~~~vtdv~~l~~~~ 120 (307)
T 1efp_A 96 NVMPRVAALLDVMVLSDVSAILDAD 120 (307)
T ss_dssp HHHHHHHHHTTCCEEEEESEECSSS
T ss_pred hHHHHHHHHhCCCccccEEEEccCC
Confidence 4789999999999999999998765
No 18
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=20.80 E-value=1.3e+02 Score=22.86 Aligned_cols=31 Identities=13% Similarity=0.252 Sum_probs=23.1
Q ss_pred CchHHHHHHHhCCCcccceeEEEEeCCEEEEE
Q psy10640 144 NQTAQMTAAFLNWPQATFASKVDKTDGELTVK 175 (242)
Q Consensus 144 ~~~~~~LA~~L~~p~~t~~~~~~~~~~~~~v~ 175 (242)
.++-..||++|+||.-+|. .+.+.+..++.+
T Consensus 20 ~~l~~~la~ll~l~~~~Ft-~i~V~g~aVTFr 50 (91)
T 2qt7_A 20 VKLLEILAEHVHMSSGSFI-NISVVGPALTFR 50 (91)
T ss_dssp HHHHHHHHHHHTSCGGGEE-EEEEETTEEEEE
T ss_pred HHHHHHHHHHhcCCcccee-eeEeecceEEEE
Confidence 4566789999999988775 666666666554
Done!