Query psy10641
Match_columns 97
No_of_seqs 100 out of 132
Neff 5.5
Searched_HMMs 13730
Date Fri Aug 16 23:42:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10641.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/10641hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2azeb1 e.63.1.2 (B:201-301) T 71.7 5.2 0.00038 24.3 5.6 33 60-92 2-34 (101)
2 d1fxka_ a.2.5.1 (A:) Prefoldin 63.1 12 0.00087 22.1 10.5 78 15-92 10-105 (107)
3 d2bj7a1 a.43.1.3 (A:1-50) Nick 58.5 2.3 0.00017 23.1 1.6 22 13-34 22-43 (50)
4 d2hzaa1 a.43.1.3 (A:1-48) Nick 57.9 2.2 0.00016 22.9 1.5 22 13-34 20-41 (48)
5 d2vcha1 c.87.1.10 (A:6-476) Hy 34.4 16 0.0012 24.5 3.4 30 4-33 411-445 (471)
6 d2pq6a1 c.87.1.10 (A:8-480) (I 31.7 19 0.0014 24.1 3.3 28 5-32 420-452 (473)
7 d2acva1 c.87.1.10 (A:3-463) Tr 29.2 21 0.0015 23.9 3.2 30 4-33 410-442 (461)
8 d1fxkc_ a.2.5.1 (C:) Prefoldin 20.7 79 0.0057 18.5 6.0 37 57-93 93-129 (133)
9 d1hcia1 a.7.1.1 (A:272-396) al 17.6 60 0.0044 19.3 3.4 14 27-40 98-111 (125)
10 d1nkpa_ a.38.1.1 (A:) Myc prot 14.1 1E+02 0.0075 16.9 5.4 35 59-93 52-86 (88)
No 1
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.70 E-value=5.2 Score=24.31 Aligned_cols=33 Identities=30% Similarity=0.454 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10641 60 RIASLTEDVNRQKEREAVLQERFGALDAQLKQL 92 (97)
Q Consensus 60 Rle~L~eeV~~q~~REr~lQ~rY~~L~~e~~~l 92 (97)
|+..|+.|+..+...|+.|...-..+...+..+
T Consensus 2 r~~~L~~El~~L~~~E~~LD~li~~~~~~L~~l 34 (101)
T d2azeb1 2 RLEGLTQDLRQLQESEQQLDHLMNICTTQLRLL 34 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788999999999999999998888777776655
No 2
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=63.08 E-value=12 Score=22.10 Aligned_cols=78 Identities=15% Similarity=0.242 Sum_probs=61.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-----------------H-HhhHHHHHHHHHHHHHHHHHHHH
Q psy10641 15 LGGYQARAQELLKQYKVLESQIDQCYVDLSTFSFLKTQ-----------------E-EASIPRRIASLTEDVNRQKEREA 76 (97)
Q Consensus 15 lgGYq~Ra~~L~kki~e~~~~le~a~~el~~F~~L~~~-----------------E-~~Ai~rRle~L~eeV~~q~~REr 76 (97)
+-+++.--..+..++..+-.++..+..-+..+..+... | ...+..|++.+..++..+...+.
T Consensus 10 ~q~lq~el~~~~~q~~~le~q~~E~~~vl~eL~~l~~d~~vyk~vG~vLv~~~~~e~~~~l~~~~e~l~~~i~~l~~q~~ 89 (107)
T d1fxka_ 10 FQQLQQQAQAISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLREKTIERQEE 89 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHhcchhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777788888888888888888777777766421 1 13467899999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy10641 77 VLQERFGALDAQLKQL 92 (97)
Q Consensus 77 ~lQ~rY~~L~~e~~~l 92 (97)
.++..|..+......+
T Consensus 90 ~l~~~l~~~~~~l~~~ 105 (107)
T d1fxka_ 90 RVMKKLQEMQVNIQEA 105 (107)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998887654
No 3
>d2bj7a1 a.43.1.3 (A:1-50) Nickel responsive regulator NikR, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=58.46 E-value=2.3 Score=23.09 Aligned_cols=22 Identities=18% Similarity=0.203 Sum_probs=17.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHH
Q psy10641 13 ILLGGYQARAQELLKQYKVLES 34 (97)
Q Consensus 13 v~lgGYq~Ra~~L~kki~e~~~ 34 (97)
|..+||.+|++.++.-|.+...
T Consensus 22 v~~~gy~nRSEaIRdliR~~l~ 43 (50)
T d2bj7a1 22 IEEIGYENRSEAIRDLIRDFII 43 (50)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHH
T ss_pred HHHcCCCcHHHHHHHHHHHHHH
Confidence 4458999999999988877654
No 4
>d2hzaa1 a.43.1.3 (A:1-48) Nickel responsive regulator NikR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=57.92 E-value=2.2 Score=22.95 Aligned_cols=22 Identities=14% Similarity=0.209 Sum_probs=17.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHH
Q psy10641 13 ILLGGYQARAQELLKQYKVLES 34 (97)
Q Consensus 13 v~lgGYq~Ra~~L~kki~e~~~ 34 (97)
|.-+||.+|++.++.-|.+...
T Consensus 20 v~~~gy~nRSEaIRdliR~~l~ 41 (48)
T d2hzaa1 20 SQRRGYNNRSEAIRDILRSALA 41 (48)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHH
T ss_pred HHHcCCCcHHHHHHHHHHHHHH
Confidence 3458999999999988877654
No 5
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=34.37 E-value=16 Score=24.52 Aligned_cols=30 Identities=17% Similarity=0.100 Sum_probs=22.5
Q ss_pred HHhHHHHHHhhhhh-----HHHHHHHHHHHHHHHH
Q psy10641 4 VACLCVQMKILLGG-----YQARAQELLKQYKVLE 33 (97)
Q Consensus 4 a~KlEKKL~v~lgG-----Yq~Ra~~L~kki~e~~ 33 (97)
+..|++.++-++.+ |..|+..|.+.+..++
T Consensus 411 ~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~ 445 (471)
T d2vcha1 411 REEVARVVKGLMEGEEGKGVRNKMKELKEAACRVL 445 (471)
T ss_dssp HHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 35677788877765 9999998888877653
No 6
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=31.66 E-value=19 Score=24.14 Aligned_cols=28 Identities=21% Similarity=0.240 Sum_probs=18.4
Q ss_pred HhHHHHHHhhhhh-----HHHHHHHHHHHHHHH
Q psy10641 5 ACLCVQMKILLGG-----YQARAQELLKQYKVL 32 (97)
Q Consensus 5 ~KlEKKL~v~lgG-----Yq~Ra~~L~kki~e~ 32 (97)
..+.+.+.-++.. |..||..|.+.+..+
T Consensus 420 ~~l~~ai~~vl~d~~~~~~r~~a~~l~~~~~~a 452 (473)
T d2pq6a1 420 EELAKLINEVIAGDKGKKMKQKAMELKKKAEEN 452 (473)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence 3455666666655 777888777776544
No 7
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=29.24 E-value=21 Score=23.87 Aligned_cols=30 Identities=13% Similarity=0.101 Sum_probs=23.2
Q ss_pred HHhHHHHHHhhhh--h-HHHHHHHHHHHHHHHH
Q psy10641 4 VACLCVQMKILLG--G-YQARAQELLKQYKVLE 33 (97)
Q Consensus 4 a~KlEKKL~v~lg--G-Yq~Ra~~L~kki~e~~ 33 (97)
+..+++.+.-+++ . |..|++.|++.+.++.
T Consensus 410 ~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~ 442 (461)
T d2acva1 410 AEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAV 442 (461)
T ss_dssp HHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 4578888888883 3 9999999998776553
No 8
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.75 E-value=79 Score=18.45 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10641 57 IPRRIASLTEDVNRQKEREAVLQERFGALDAQLKQLE 93 (97)
Q Consensus 57 i~rRle~L~eeV~~q~~REr~lQ~rY~~L~~e~~~l~ 93 (97)
+.+|++.+..........=..+++.+..+..+.+++.
T Consensus 93 l~~ri~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l~ 129 (133)
T d1fxkc_ 93 IKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELL 129 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688888888888888888888888888888877764
No 9
>d1hcia1 a.7.1.1 (A:272-396) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.60 E-value=60 Score=19.35 Aligned_cols=14 Identities=7% Similarity=-0.026 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHH
Q psy10641 27 KQYKVLESQIDQCY 40 (97)
Q Consensus 27 kki~e~~~~le~a~ 40 (97)
..|+..|+.|+++.
T Consensus 98 ~di~~~W~~L~~ae 111 (125)
T d1hcia1 98 SDIAGAWQRLEQAE 111 (125)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 35666677666555
No 10
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.14 E-value=1e+02 Score=16.87 Aligned_cols=35 Identities=26% Similarity=0.326 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10641 59 RRIASLTEDVNRQKEREAVLQERFGALDAQLKQLE 93 (97)
Q Consensus 59 rRle~L~eeV~~q~~REr~lQ~rY~~L~~e~~~l~ 93 (97)
.=|..|+.++......-..++..-..|..++..|.
T Consensus 52 ~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L~ 86 (88)
T d1nkpa_ 52 AYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLG 86 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34566666666665555556666666666666653
Done!