Query psy10643
Match_columns 769
No_of_seqs 429 out of 2269
Neff 5.1
Searched_HMMs 29240
Date Fri Aug 16 23:46:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10643.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10643hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1h89_C C-MYB, MYB proto-oncoge 100.0 1.3E-36 4.4E-41 295.6 7.0 152 7-189 4-158 (159)
2 1h8a_C AMV V-MYB, MYB transfor 100.0 2E-29 6.9E-34 236.9 7.3 124 35-189 1-127 (128)
3 1gv2_A C-MYB, MYB proto-oncoge 100.0 1.1E-28 3.7E-33 224.2 9.4 102 7-108 2-104 (105)
4 3zqc_A MYB3; transcription-DNA 100.0 1.7E-28 5.8E-33 231.8 10.0 107 9-115 2-109 (131)
5 2k9n_A MYB24; R2R3 domain, DNA 99.9 1.8E-28 6.1E-33 224.1 9.7 103 9-111 1-104 (107)
6 3osg_A MYB21; transcription-DN 99.9 1.3E-27 4.5E-32 224.5 10.1 101 6-107 8-109 (126)
7 1h8a_C AMV V-MYB, MYB transfor 99.9 3.5E-27 1.2E-31 221.7 8.9 102 7-108 25-127 (128)
8 1h89_C C-MYB, MYB proto-oncoge 99.9 4.4E-25 1.5E-29 214.5 8.6 102 7-108 56-158 (159)
9 1gv2_A C-MYB, MYB proto-oncoge 99.9 6.2E-22 2.1E-26 179.7 7.7 101 58-189 1-104 (105)
10 3osg_A MYB21; transcription-DN 99.8 2.7E-21 9.1E-26 181.6 9.1 102 56-188 6-109 (126)
11 3zqc_A MYB3; transcription-DNA 99.8 3.5E-21 1.2E-25 181.8 9.0 99 61-190 2-103 (131)
12 2k9n_A MYB24; R2R3 domain, DNA 99.8 2.3E-21 7.8E-26 177.1 7.4 98 61-189 1-101 (107)
13 2dim_A Cell division cycle 5-l 99.7 5.6E-19 1.9E-23 149.8 4.7 64 6-69 6-69 (70)
14 2din_A Cell division cycle 5-l 99.6 2E-15 6.7E-20 126.5 5.0 61 54-114 2-62 (66)
15 1gvd_A MYB proto-oncogene prot 99.5 3.5E-15 1.2E-19 119.3 5.2 52 7-58 1-52 (52)
16 2dim_A Cell division cycle 5-l 99.5 3E-15 1E-19 126.8 4.8 61 55-115 3-65 (70)
17 1guu_A C-MYB, MYB proto-oncoge 99.5 4.3E-15 1.5E-19 118.7 4.8 52 7-58 1-52 (52)
18 2d9a_A B-MYB, MYB-related prot 99.5 6.1E-15 2.1E-19 121.2 5.7 54 7-60 6-59 (60)
19 1ign_A Protein (RAP1); RAP1,ye 99.5 4.8E-15 1.6E-19 151.5 6.2 102 7-108 6-200 (246)
20 2juh_A Telomere binding protei 99.5 1.2E-14 4.1E-19 135.7 4.3 79 7-85 15-103 (121)
21 1ity_A TRF1; helix-turn-helix, 99.5 2.2E-14 7.5E-19 121.3 5.3 59 7-65 8-68 (69)
22 2d9a_A B-MYB, MYB-related prot 99.5 2E-14 6.8E-19 118.2 3.8 55 56-110 3-59 (60)
23 3sjm_A Telomeric repeat-bindin 99.5 2.6E-14 9E-19 119.5 4.5 55 6-60 8-64 (64)
24 2llk_A Cyclin-D-binding MYB-li 99.5 1.4E-14 4.7E-19 124.3 2.8 59 46-105 8-67 (73)
25 2roh_A RTBP1, telomere binding 99.5 4.6E-14 1.6E-18 131.9 6.6 75 7-81 29-113 (122)
26 2juh_A Telomere binding protei 99.4 3.7E-14 1.3E-18 132.4 4.6 82 55-166 11-103 (121)
27 1x41_A Transcriptional adaptor 99.4 1.4E-13 4.7E-18 113.4 5.7 53 7-59 6-58 (60)
28 1gvd_A MYB proto-oncogene prot 99.4 6.6E-14 2.3E-18 111.9 3.5 49 59-107 1-51 (52)
29 1guu_A C-MYB, MYB proto-oncoge 99.4 5.7E-14 2E-18 112.1 3.1 50 59-108 1-52 (52)
30 1w0t_A Telomeric repeat bindin 99.4 1.6E-13 5.5E-18 110.2 4.7 49 8-56 1-51 (53)
31 1ity_A TRF1; helix-turn-helix, 99.4 1.4E-13 4.9E-18 116.3 4.4 61 54-114 3-67 (69)
32 2cu7_A KIAA1915 protein; nucle 99.4 2.8E-13 9.7E-18 115.4 4.6 58 54-111 2-60 (72)
33 2elk_A SPCC24B10.08C protein; 99.4 4.5E-13 1.5E-17 109.8 5.5 49 7-55 7-56 (58)
34 2roh_A RTBP1, telomere binding 99.3 5.1E-13 1.7E-17 124.9 5.1 80 56-166 26-117 (122)
35 1x41_A Transcriptional adaptor 99.3 6.5E-13 2.2E-17 109.4 4.0 52 56-107 3-56 (60)
36 1ign_A Protein (RAP1); RAP1,ye 99.3 3.1E-12 1.1E-16 130.9 9.8 129 57-189 4-200 (246)
37 2yum_A ZZZ3 protein, zinc fing 99.3 6.9E-13 2.3E-17 113.7 3.9 58 7-64 6-68 (75)
38 2din_A Cell division cycle 5-l 99.3 4.8E-13 1.6E-17 112.0 2.1 54 7-62 7-60 (66)
39 3sjm_A Telomeric repeat-bindin 99.3 8.4E-13 2.9E-17 110.4 3.5 52 59-110 9-64 (64)
40 1w0t_A Telomeric repeat bindin 99.3 1.4E-12 4.8E-17 104.7 3.9 47 60-106 1-51 (53)
41 2yum_A ZZZ3 protein, zinc fing 99.3 1.2E-12 3.9E-17 112.3 3.4 58 56-113 3-67 (75)
42 2cu7_A KIAA1915 protein; nucle 99.3 2.1E-12 7.1E-17 110.1 3.5 54 7-61 7-60 (72)
43 2elk_A SPCC24B10.08C protein; 99.2 4.4E-12 1.5E-16 103.9 4.5 50 56-105 4-56 (58)
44 2llk_A Cyclin-D-binding MYB-li 99.2 3.1E-11 1.1E-15 103.5 6.1 52 7-61 21-72 (73)
45 2ltp_A Nuclear receptor corepr 98.8 3.6E-12 1.2E-16 113.1 0.0 55 53-107 8-63 (89)
46 2ckx_A NGTRF1, telomere bindin 99.1 4.5E-11 1.5E-15 104.9 6.9 68 10-77 1-78 (83)
47 2aje_A Telomere repeat-binding 99.1 6.7E-11 2.3E-15 108.0 6.3 52 56-107 8-65 (105)
48 2yus_A SWI/SNF-related matrix- 99.1 6.7E-11 2.3E-15 102.9 5.8 47 7-54 16-62 (79)
49 2aje_A Telomere repeat-binding 99.1 7.6E-11 2.6E-15 107.7 4.8 74 7-80 11-94 (105)
50 2ltp_A Nuclear receptor corepr 98.6 2.8E-11 9.7E-16 107.3 0.0 51 6-57 13-63 (89)
51 2ckx_A NGTRF1, telomere bindin 99.0 4.3E-10 1.5E-14 98.7 6.5 47 62-108 1-53 (83)
52 2cqr_A RSGI RUH-043, DNAJ homo 99.0 1.2E-10 4.1E-15 99.9 2.9 50 7-56 16-68 (73)
53 2cqr_A RSGI RUH-043, DNAJ homo 99.0 2.2E-10 7.7E-15 98.2 4.2 50 57-106 14-68 (73)
54 2yus_A SWI/SNF-related matrix- 99.0 2.1E-10 7.2E-15 99.8 2.9 47 58-104 15-62 (79)
55 2cjj_A Radialis; plant develop 98.8 3.9E-09 1.3E-13 94.5 4.2 49 7-55 6-57 (93)
56 2cjj_A Radialis; plant develop 98.7 1.1E-08 3.8E-13 91.5 3.8 49 60-108 7-60 (93)
57 2eqr_A N-COR1, N-COR, nuclear 98.6 3.1E-08 1.1E-12 81.8 4.8 47 9-56 12-58 (61)
58 1x58_A Hypothetical protein 49 98.6 3.6E-08 1.2E-12 81.7 4.2 49 59-107 6-58 (62)
59 1x58_A Hypothetical protein 49 98.4 1.8E-07 6.1E-12 77.6 3.7 48 8-56 7-57 (62)
60 2eqr_A N-COR1, N-COR, nuclear 98.3 3.6E-07 1.2E-11 75.4 4.3 46 60-105 11-57 (61)
61 2cqq_A RSGI RUH-037, DNAJ homo 98.3 5.1E-07 1.7E-11 77.2 4.4 49 7-56 6-57 (72)
62 2iw5_B Protein corest, REST co 98.2 8.7E-07 3E-11 90.3 5.1 48 8-56 132-179 (235)
63 1wgx_A KIAA1903 protein; MYB D 98.2 1.8E-06 6E-11 74.0 5.2 50 7-56 6-58 (73)
64 2cqq_A RSGI RUH-037, DNAJ homo 98.1 9.9E-07 3.4E-11 75.4 3.2 50 58-107 5-58 (72)
65 2xag_B REST corepressor 1; ami 98.1 9.8E-07 3.4E-11 98.9 2.8 45 62-106 381-426 (482)
66 2iw5_B Protein corest, REST co 98.0 3.8E-06 1.3E-10 85.6 6.0 76 31-107 104-180 (235)
67 3hm5_A DNA methyltransferase 1 98.0 2.9E-06 1E-10 75.8 4.5 65 44-112 17-87 (93)
68 1fex_A TRF2-interacting telome 97.9 7.3E-06 2.5E-10 67.4 3.5 48 9-56 2-58 (59)
69 1wgx_A KIAA1903 protein; MYB D 97.6 2.9E-05 9.9E-10 66.5 3.7 46 61-106 8-58 (73)
70 1fex_A TRF2-interacting telome 97.6 2.8E-05 9.6E-10 63.9 2.9 46 61-106 2-58 (59)
71 4eef_G F-HB80.4, designed hema 97.5 1.9E-05 6.5E-10 67.5 0.8 44 9-52 20-66 (74)
72 2yqk_A Arginine-glutamic acid 97.4 0.00011 3.8E-09 61.0 4.5 49 7-56 7-56 (63)
73 1ofc_X ISWI protein; nuclear p 97.4 0.00012 3.9E-09 78.2 5.3 98 10-107 111-275 (304)
74 2xag_B REST corepressor 1; ami 97.2 0.00021 7.1E-09 80.3 5.0 47 8-55 379-425 (482)
75 4a69_C Nuclear receptor corepr 97.1 0.00036 1.2E-08 62.4 4.2 45 10-55 44-88 (94)
76 2crg_A Metastasis associated p 97.0 0.00042 1.4E-08 58.7 4.1 46 10-56 9-55 (70)
77 3hm5_A DNA methyltransferase 1 97.0 0.00048 1.6E-08 61.6 4.1 48 7-55 28-80 (93)
78 4eef_G F-HB80.4, designed hema 96.9 0.00035 1.2E-08 59.7 2.2 42 61-102 20-66 (74)
79 2yqk_A Arginine-glutamic acid 96.7 0.0017 5.7E-08 53.9 4.7 48 56-103 4-53 (63)
80 2lr8_A CAsp8-associated protei 95.7 0.00029 9.9E-09 59.3 0.0 45 62-106 15-62 (70)
81 1ug2_A 2610100B20RIK gene prod 96.5 0.0016 5.4E-08 57.7 3.3 49 62-110 34-86 (95)
82 2ebi_A DNA binding protein GT- 96.3 0.0017 5.7E-08 56.6 2.9 47 8-54 3-62 (86)
83 4a69_C Nuclear receptor corepr 96.1 0.0037 1.3E-07 55.8 3.9 43 61-103 43-86 (94)
84 1ug2_A 2610100B20RIK gene prod 95.5 0.01 3.5E-07 52.6 4.1 43 11-53 35-79 (95)
85 2ebi_A DNA binding protein GT- 95.5 0.004 1.4E-07 54.2 1.4 50 61-110 4-68 (86)
86 4b4c_A Chromodomain-helicase-D 95.4 0.021 7.1E-07 57.1 6.5 97 10-106 8-195 (211)
87 2crg_A Metastasis associated p 95.2 0.015 5.3E-07 49.1 4.0 43 61-103 8-52 (70)
88 4iej_A DNA methyltransferase 1 95.1 0.021 7.3E-07 50.9 4.8 52 62-113 31-88 (93)
89 2lr8_A CAsp8-associated protei 93.9 0.0046 1.6E-07 52.1 0.0 44 11-55 16-61 (70)
90 2y9y_A Imitation switch protei 94.6 0.052 1.8E-06 59.3 7.3 100 10-109 124-293 (374)
91 4iej_A DNA methyltransferase 1 93.9 0.045 1.5E-06 48.9 4.1 48 7-55 28-80 (93)
92 1ofc_X ISWI protein; nuclear p 88.1 0.44 1.5E-05 50.9 5.1 47 7-53 210-271 (304)
93 4b4c_A Chromodomain-helicase-D 87.1 1.9 6.5E-05 42.8 8.8 47 60-106 6-58 (211)
94 1irz_A ARR10-B; helix-turn-hel 81.9 1.9 6.3E-05 36.0 4.9 46 9-54 7-56 (64)
95 2xb0_X Chromo domain-containin 79.1 1.2 4.2E-05 46.7 3.7 27 11-37 170-196 (270)
96 2y9y_A Imitation switch protei 71.0 4.2 0.00014 44.5 5.4 44 8-51 227-285 (374)
97 1irz_A ARR10-B; helix-turn-hel 66.0 6.5 0.00022 32.7 4.3 47 60-106 6-58 (64)
98 2xb0_X Chromo domain-containin 54.1 4.1 0.00014 42.8 1.4 26 63-88 170-196 (270)
99 1ic2_A Tropomyosin alpha chain 43.4 1.5E+02 0.0051 25.1 9.4 67 674-755 6-72 (81)
100 3ghg_A Fibrinogen alpha chain; 38.8 1.3E+02 0.0046 34.2 10.4 39 728-766 114-152 (562)
101 2li6_A SWI/SNF chromatin-remod 35.7 18 0.00062 32.9 2.5 39 19-57 53-98 (116)
102 1c1g_A Tropomyosin; contractIl 30.1 3.2E+02 0.011 26.0 10.7 26 730-755 75-100 (284)
103 3na7_A HP0958; flagellar bioge 29.5 3.1E+02 0.011 27.8 10.8 33 673-705 52-84 (256)
104 3o0z_A RHO-associated protein 29.2 55 0.0019 32.1 4.7 34 729-762 95-128 (168)
105 3bas_A Myosin heavy chain, str 28.9 2.8E+02 0.0096 23.9 9.6 76 672-762 12-87 (89)
106 2aze_B Transcription factor E2 28.8 67 0.0023 29.0 5.0 37 729-765 4-40 (106)
107 3oja_B Anopheles plasmodium-re 25.9 2.6E+02 0.009 31.1 10.4 24 737-760 543-566 (597)
108 2rq5_A Protein jumonji; develo 23.8 36 0.0012 31.4 2.3 56 19-77 46-113 (121)
109 2jvw_A Uncharacterized protein 23.8 34 0.0012 30.0 1.9 45 17-73 18-69 (88)
110 1ig6_A MRF-2, modulator recogn 23.6 45 0.0015 29.7 2.8 40 18-57 36-87 (107)
111 2jrz_A Histone demethylase jar 21.4 69 0.0024 29.1 3.7 39 19-57 44-93 (117)
112 2jxj_A Histone demethylase jar 21.2 64 0.0022 28.0 3.3 38 19-56 40-88 (96)
No 1
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=100.00 E-value=1.3e-36 Score=295.63 Aligned_cols=152 Identities=29% Similarity=0.493 Sum_probs=108.7
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCC-Cccc
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPT-QWRT 85 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~-~W~~ 85 (769)
+++|+||+|||++|+.+|.+||.++|..||..|++||+.||+.||.++|+|.+++++||.+||.+|+.+|..||. +|..
T Consensus 4 ~~k~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~~v~~~g~~~W~~ 83 (159)
T 1h89_C 4 LGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIKLVQKYGPKRWSV 83 (159)
T ss_dssp ---------------------------------------CHHHHHHTTTCTTCCCSCCCHHHHHHHHHHHHHHCSCCHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcCCCCHHHHHHHHHHccCCCcCCCCCChHHHHHHHHHHHHhCcccHHH
Confidence 678999999999999999999988999999999999999999999999999999999999999999999999995 7999
Q ss_pred ccc-CCCCCHHHHHHHHHHhhhHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhhhh
Q psy10643 86 IAP-IIGRTAAQCLERYEFLLDQAQKKEEGEDVADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQ 164 (769)
Q Consensus 86 IA~-l~GRT~~QCreRw~~lL~p~ikk~~~~~~~dd~r~l~pg~~~p~petkpa~Pd~~d~~edE~emL~ea~arlgN~w 164 (769)
||. |+|||+.||++||.++|+|.+++++| |++|+.+|.+++..+|++|
T Consensus 84 Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~W-------------------------------T~eEd~~L~~~~~~~g~~W 132 (159)
T 1h89_C 84 IAKHLKGRIGKQCRERWHNHLNPEVKKTSW-------------------------------TEEEDRIIYQAHKRLGNRW 132 (159)
T ss_dssp HHHTSTTCCHHHHHHHHHHTTCTTSCCSCC-------------------------------CHHHHHHHHHHHHHHCSCH
T ss_pred HHHHcCCCCHHHHHHHHHHHhCccccccCC-------------------------------ChHHHHHHHHHHHHHCCCH
Confidence 999 89999999999999999999999999 9999999999999999999
Q ss_pred hHhhcC-chhhhhHHHHHHHHHHHhH
Q psy10643 165 GKKAKR-KAREKQLEEARRLAALQKR 189 (769)
Q Consensus 165 ~kiAkr-k~R~~~~~k~r~~a~Lqkr 189 (769)
.+||+. +||+++.+++||+..|+++
T Consensus 133 ~~Ia~~l~gRt~~~~knr~~~~~r~~ 158 (159)
T 1h89_C 133 AEIAKLLPGRTDNAIKNHWNSTMRRK 158 (159)
T ss_dssp HHHHTTSTTCCHHHHHHHHHTTTCC-
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHhcc
Confidence 999999 9999999999999887664
No 2
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=99.95 E-value=2e-29 Score=236.95 Aligned_cols=124 Identities=26% Similarity=0.521 Sum_probs=98.7
Q ss_pred HHHHhhhcChhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCC-Ccccccc-CCCCCHHHHHHHHHHhhhHHhhhc
Q psy10643 35 IASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPT-QWRTIAP-IIGRTAAQCLERYEFLLDQAQKKE 112 (769)
Q Consensus 35 IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~-~W~~IA~-l~GRT~~QCreRw~~lL~p~ikk~ 112 (769)
||+.|++||+.||+.||.++|+|++++++||+|||++|+.+|..||. +|..||. |+|||+.||++||.++|+|.++++
T Consensus 1 Ia~~~~~Rt~~qC~~Rw~~~l~p~~~k~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~ 80 (128)
T 1h8a_C 1 MEAVIKNRTDVQCQHRWQKVLNPELNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKGRIGKQCRERWHNHLNPEVKKT 80 (128)
T ss_dssp ---------------------CTTCCCSCCCHHHHHHHHHHHHHTCSCCHHHHHHHSSSCCHHHHHHHHHHTTCSSSCCS
T ss_pred CccccCCCCHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhcCCcHHHHHHHHHHhcccccccc
Confidence 79999999999999999999999999999999999999999999995 7999999 999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhhhhhHhhcC-chhhhhHHHHHHHHHHHhH
Q psy10643 113 EGEDVADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKR-KAREKQLEEARRLAALQKR 189 (769)
Q Consensus 113 ~~~~~~dd~r~l~pg~~~p~petkpa~Pd~~d~~edE~emL~ea~arlgN~w~kiAkr-k~R~~~~~k~r~~a~Lqkr 189 (769)
+| |++|+++|.+++..+|+.|.+||+. +||+++.+++||...|+++
T Consensus 81 ~W-------------------------------T~eEd~~L~~~~~~~G~~W~~Ia~~l~gRt~~~~k~r~~~~~~~~ 127 (128)
T 1h8a_C 81 SW-------------------------------TEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRK 127 (128)
T ss_dssp CC-------------------------------CHHHHHHHHHHHHHHCSCHHHHGGGSTTCCHHHHHHHHHTTTTC-
T ss_pred cC-------------------------------CHHHHHHHHHHHHHHCcCHHHHHHHCCCCCHHHHHHHHHHHHhcc
Confidence 99 9999999999999999999999999 8999999999999877654
No 3
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=99.95 E-value=1.1e-28 Score=224.17 Aligned_cols=102 Identities=31% Similarity=0.562 Sum_probs=97.8
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCCCcccc
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTI 86 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~I 86 (769)
+++|+||++||++|+.+|.+||.++|..||..|++||+.||+.||.++|+|.+++++||.|||.+|+.+|..||.+|..|
T Consensus 2 l~k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~~~~~~G~~W~~I 81 (105)
T 1gv2_A 2 LIKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEI 81 (105)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHHHHHHHSSCHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcHHHHhhhhcCCCHHHHHHHHHhccCCcccccCCCHHHHHHHHHHHHHhCCCHHHH
Confidence 67899999999999999999998899999999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCCCHHHHHHHHHHhhhHH
Q psy10643 87 AP-IIGRTAAQCLERYEFLLDQA 108 (769)
Q Consensus 87 A~-l~GRT~~QCreRw~~lL~p~ 108 (769)
|. |+|||+.||++||+.+++..
T Consensus 82 a~~l~gRt~~~~k~rw~~~~~~~ 104 (105)
T 1gv2_A 82 AKLLPGRTDNAIKNHWNSTMRRK 104 (105)
T ss_dssp HTTCTTCCHHHHHHHHHHHTC--
T ss_pred HHHcCCCCHHHHHHHHHHHHhcc
Confidence 99 89999999999999998764
No 4
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=99.95 E-value=1.7e-28 Score=231.83 Aligned_cols=107 Identities=30% Similarity=0.598 Sum_probs=103.9
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCCCcccccc
Q psy10643 9 RWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAP 88 (769)
Q Consensus 9 kG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~ 88 (769)
+|+||+|||++|+.+|..||.++|..||..||+||+.||++||.++|+|.+++++||.+||.+|+.+|..||++|..||.
T Consensus 2 Kg~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~~l~p~~~~~~Wt~eEd~~L~~~~~~~G~~W~~Ia~ 81 (131)
T 3zqc_A 2 KGPFTEAEDDLIREYVKENGPQNWPRITSFLPNRSPKQCRERWFNHLDPAVVKHAWTPEEDETIFRNYLKLGSKWSVIAK 81 (131)
T ss_dssp CSSCCHHHHHHHHHHHHHHCSCCGGGGTTSCTTSCHHHHHHHHHHHTSTTCCCSCCCHHHHHHHHHHHHHSCSCHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCcCCHHHHHHHHCCCCHHHHHHHHhhccCccccCCCCCHHHHHHHHHHHHHHCcCHHHHHH
Confidence 58999999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCHHHHHHHHHHhhhHHhhhccCC
Q psy10643 89 -IIGRTAAQCLERYEFLLDQAQKKEEGE 115 (769)
Q Consensus 89 -l~GRT~~QCreRw~~lL~p~ikk~~~~ 115 (769)
|+|||+.||++||+++|++.+..+.|.
T Consensus 82 ~l~gRt~~~~k~rw~~~l~~~~~~~~~~ 109 (131)
T 3zqc_A 82 LIPGRTDNAIKNRWNSSISKRISTNSNH 109 (131)
T ss_dssp TSTTCCHHHHHHHHHHTTGGGCCCCTTS
T ss_pred HcCCCCHHHHHHHHHHHHHHHhhcCCCc
Confidence 899999999999999999999988773
No 5
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=99.95 E-value=1.8e-28 Score=224.13 Aligned_cols=103 Identities=25% Similarity=0.544 Sum_probs=99.3
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCCCcccccc
Q psy10643 9 RWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAP 88 (769)
Q Consensus 9 kG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~ 88 (769)
+|+||+|||++|+.+|.+||.++|..||..||+||+.||++||.++|+|++++++||.|||.+|+.+|..||++|..||.
T Consensus 1 K~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~~~~~~~G~~W~~Ia~ 80 (107)
T 2k9n_A 1 KVKFTEEEDLKLQQLVMRYGAKDWIRISQLMITRNPRQCRERWNNYINPALRTDPWSPEEDMLLDQKYAEYGPKWNKISK 80 (107)
T ss_dssp CCSSCHHHHHHHHHHHHHHCSSCHHHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHHHHHHHTCSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHhhhcCCCCHHHHHHHHHHHHcccccccccCHHHHHHHHHHHHHhCcCHHHHHH
Confidence 58999999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCHHHHHHHHHHhhhHHhhh
Q psy10643 89 -IIGRTAAQCLERYEFLLDQAQKK 111 (769)
Q Consensus 89 -l~GRT~~QCreRw~~lL~p~ikk 111 (769)
|+|||+.||++||+.+++...++
T Consensus 81 ~l~gRt~~~~k~rw~~l~r~~~~~ 104 (107)
T 2k9n_A 81 FLKNRSDNNIRNRWMMIARHRAKH 104 (107)
T ss_dssp HHSSSCHHHHHHHHHHHHHHHHSS
T ss_pred HCCCCCHHHHHHHHHHHHhhHHHh
Confidence 99999999999999999876554
No 6
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=99.94 E-value=1.3e-27 Score=224.48 Aligned_cols=101 Identities=34% Similarity=0.582 Sum_probs=97.9
Q ss_pred ccccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCCCccc
Q psy10643 6 ILKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRT 85 (769)
Q Consensus 6 ~vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~ 85 (769)
-+++|+||+|||++|+.+|.+||. +|..||..|++||+.||+.||.++|+|.+++++||.|||.+|+.+|..||.+|..
T Consensus 8 ~~kk~~WT~eED~~L~~~v~~~G~-~W~~Ia~~~~~Rt~~qcr~Rw~~~l~p~~~~~~WT~eEd~~L~~~v~~~G~~W~~ 86 (126)
T 3osg_A 8 AAKKQKFTPEEDEMLKRAVAQHGS-DWKMIAATFPNRNARQCRDRWKNYLAPSISHTPWTAEEDALLVQKIQEYGRQWAI 86 (126)
T ss_dssp BCSSCCCCHHHHHHHHHHHHHHTT-CHHHHHHTCTTCCHHHHHHHHHHHTSTTSCCSCCCHHHHHHHHHHHHHHCSCHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCC-CHHHHHHHcCCCCHHHHHHHHhhhcccccccccCCHHHHHHHHHHHHHHCcCHHH
Confidence 378999999999999999999996 9999999999999999999999999999999999999999999999999999999
Q ss_pred ccc-CCCCCHHHHHHHHHHhhhH
Q psy10643 86 IAP-IIGRTAAQCLERYEFLLDQ 107 (769)
Q Consensus 86 IA~-l~GRT~~QCreRw~~lL~p 107 (769)
||. |+|||+.||++||+.+++.
T Consensus 87 Ia~~l~gRt~~~~k~rw~~l~~k 109 (126)
T 3osg_A 87 IAKFFPGRTDIHIKNRWVTISNK 109 (126)
T ss_dssp HHTTSTTCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHh
Confidence 999 8999999999999998865
No 7
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=99.94 E-value=3.5e-27 Score=221.68 Aligned_cols=102 Identities=31% Similarity=0.583 Sum_probs=98.1
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCCCcccc
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTI 86 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~I 86 (769)
+++|+||+|||++|+.+|.+||.++|..||..|++||+.||+.||.++|+|.+++++||.|||.+|+.+|..||++|..|
T Consensus 25 ~~k~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~WT~eEd~~L~~~~~~~G~~W~~I 104 (128)
T 1h8a_C 25 LNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEI 104 (128)
T ss_dssp CCCSCCCHHHHHHHHHHHHHTCSCCHHHHHHHSSSCCHHHHHHHHHHTTCSSSCCSCCCHHHHHHHHHHHHHHCSCHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhcCCcHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHCcCHHHH
Confidence 67899999999999999999998899999999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCCCHHHHHHHHHHhhhHH
Q psy10643 87 AP-IIGRTAAQCLERYEFLLDQA 108 (769)
Q Consensus 87 A~-l~GRT~~QCreRw~~lL~p~ 108 (769)
|. |+|||+.+|++||+.+++..
T Consensus 105 a~~l~gRt~~~~k~r~~~~~~~~ 127 (128)
T 1h8a_C 105 AKLLPGRTDNAVKNHWNSTMRRK 127 (128)
T ss_dssp GGGSTTCCHHHHHHHHHTTTTC-
T ss_pred HHHCCCCCHHHHHHHHHHHHhcc
Confidence 99 99999999999999988653
No 8
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=99.91 E-value=4.4e-25 Score=214.52 Aligned_cols=102 Identities=31% Similarity=0.562 Sum_probs=97.9
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCCCcccc
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTI 86 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~I 86 (769)
+++|+||++||++|+.+|..||.++|..||..|++||+.||+.||.++|+|.+++++||.+||..|+.++..||++|..|
T Consensus 56 ~~~~~Wt~eEd~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~WT~eEd~~L~~~~~~~g~~W~~I 135 (159)
T 1h89_C 56 LIKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEI 135 (159)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHCSCCHHHHHHTSTTCCHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHHHHCSCHHHH
T ss_pred cCCCCCChHHHHHHHHHHHHhCcccHHHHHHHcCCCCHHHHHHHHHHHhCccccccCCChHHHHHHHHHHHHHCCCHHHH
Confidence 67899999999999999999998789999999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCCCHHHHHHHHHHhhhHH
Q psy10643 87 AP-IIGRTAAQCLERYEFLLDQA 108 (769)
Q Consensus 87 A~-l~GRT~~QCreRw~~lL~p~ 108 (769)
|. |+|||+.+|++||+.+++..
T Consensus 136 a~~l~gRt~~~~knr~~~~~r~~ 158 (159)
T 1h89_C 136 AKLLPGRTDNAIKNHWNSTMRRK 158 (159)
T ss_dssp HTTSTTCCHHHHHHHHHTTTCC-
T ss_pred HHHCCCCCHHHHHHHHHHHHhcc
Confidence 99 99999999999999988653
No 9
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=99.85 E-value=6.2e-22 Score=179.69 Aligned_cols=101 Identities=27% Similarity=0.466 Sum_probs=94.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCC-Ccccccc-CCCCCHHHHHHHHHHhhhHHhhhccCCCCCCCCCCCCCCCCCCCCCC
Q psy10643 58 SIKKTEWSREEDEKLLHLAKLMPT-QWRTIAP-IIGRTAAQCLERYEFLLDQAQKKEEGEDVADDPRKLKPGEIDPNPET 135 (769)
Q Consensus 58 ~ikkg~WT~EEDe~Ll~lvk~~G~-~W~~IA~-l~GRT~~QCreRw~~lL~p~ikk~~~~~~~dd~r~l~pg~~~p~pet 135 (769)
++++++||++||++|+.+|..||. +|..||. |+|||+.||++||.++|+|.+++++|
T Consensus 1 ~l~k~~WT~eED~~L~~~v~~~g~~~W~~Ia~~l~~Rt~~qcr~Rw~~~l~p~~~~~~W--------------------- 59 (105)
T 1gv2_A 1 ELIKGPWTKEEDQRVIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSW--------------------- 59 (105)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHHTTCCCCCCCCC---------------------
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCcHHHHhhhhcCCCHHHHHHHHHhccCCcccccCC---------------------
Confidence 367999999999999999999995 8999999 89999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhhhhhhHhhcC-chhhhhHHHHHHHHHHHhH
Q psy10643 136 KPARPDPKDMDEDELEMLSEARARLANTQGKKAKR-KAREKQLEEARRLAALQKR 189 (769)
Q Consensus 136 kpa~Pd~~d~~edE~emL~ea~arlgN~w~kiAkr-k~R~~~~~k~r~~a~Lqkr 189 (769)
|++|+++|.+++..+|+.|.+||+. +||+.+.+++||...|+++
T Consensus 60 ----------t~eEd~~L~~~~~~~G~~W~~Ia~~l~gRt~~~~k~rw~~~~~~~ 104 (105)
T 1gv2_A 60 ----------TEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 104 (105)
T ss_dssp ----------CHHHHHHHHHHHHHHSSCHHHHHTTCTTCCHHHHHHHHHHHTC--
T ss_pred ----------CHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999 8999999999999887664
No 10
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=99.84 E-value=2.7e-21 Score=181.57 Aligned_cols=102 Identities=23% Similarity=0.262 Sum_probs=96.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCCCcccccc-CCCCCHHHHHHHHHHhhhHHhhhccCCCCCCCCCCCCCCCCCCCCC
Q psy10643 56 DPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLERYEFLLDQAQKKEEGEDVADDPRKLKPGEIDPNPE 134 (769)
Q Consensus 56 ~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~-l~GRT~~QCreRw~~lL~p~ikk~~~~~~~dd~r~l~pg~~~p~pe 134 (769)
.+..++++||+|||++|+.+|..||.+|..||. |+|||+.||++||.++|+|.+++++|
T Consensus 6 ~~~~kk~~WT~eED~~L~~~v~~~G~~W~~Ia~~~~~Rt~~qcr~Rw~~~l~p~~~~~~W-------------------- 65 (126)
T 3osg_A 6 LKAAKKQKFTPEEDEMLKRAVAQHGSDWKMIAATFPNRNARQCRDRWKNYLAPSISHTPW-------------------- 65 (126)
T ss_dssp -CBCSSCCCCHHHHHHHHHHHHHHTTCHHHHHHTCTTCCHHHHHHHHHHHTSTTSCCSCC--------------------
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHhhhcccccccccC--------------------
Confidence 456789999999999999999999999999999 89999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhhhhhhHhhcC-chhhhhHHHHHHHHHHHh
Q psy10643 135 TKPARPDPKDMDEDELEMLSEARARLANTQGKKAKR-KAREKQLEEARRLAALQK 188 (769)
Q Consensus 135 tkpa~Pd~~d~~edE~emL~ea~arlgN~w~kiAkr-k~R~~~~~k~r~~a~Lqk 188 (769)
|++|++.|.+++..+|+.|.+||+. +||+.+.+++||...++|
T Consensus 66 -----------T~eEd~~L~~~v~~~G~~W~~Ia~~l~gRt~~~~k~rw~~l~~k 109 (126)
T 3osg_A 66 -----------TAEEDALLVQKIQEYGRQWAIIAKFFPGRTDIHIKNRWVTISNK 109 (126)
T ss_dssp -----------CHHHHHHHHHHHHHHCSCHHHHHTTSTTCCHHHHHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 899999999999876544
No 11
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=99.84 E-value=3.5e-21 Score=181.77 Aligned_cols=99 Identities=24% Similarity=0.281 Sum_probs=95.4
Q ss_pred CCCCCHHHHHHHHHHHHhCC-CCcccccc-CCCCCHHHHHHHHHHhhhHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy10643 61 KTEWSREEDEKLLHLAKLMP-TQWRTIAP-IIGRTAAQCLERYEFLLDQAQKKEEGEDVADDPRKLKPGEIDPNPETKPA 138 (769)
Q Consensus 61 kg~WT~EEDe~Ll~lvk~~G-~~W~~IA~-l~GRT~~QCreRw~~lL~p~ikk~~~~~~~dd~r~l~pg~~~p~petkpa 138 (769)
+|+||+|||++|+.+|..|| .+|..||. |+|||+.||++||.++|+|.+++++|
T Consensus 2 Kg~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~~l~p~~~~~~W------------------------ 57 (131)
T 3zqc_A 2 KGPFTEAEDDLIREYVKENGPQNWPRITSFLPNRSPKQCRERWFNHLDPAVVKHAW------------------------ 57 (131)
T ss_dssp CSSCCHHHHHHHHHHHHHHCSCCGGGGTTSCTTSCHHHHHHHHHHHTSTTCCCSCC------------------------
T ss_pred CCCCCHHHHHHHHHHHHHhCcCCHHHHHHHHCCCCHHHHHHHHhhccCccccCCCC------------------------
Confidence 78999999999999999999 78999999 89999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhhhHhhcC-chhhhhHHHHHHHHHHHhHH
Q psy10643 139 RPDPKDMDEDELEMLSEARARLANTQGKKAKR-KAREKQLEEARRLAALQKRR 190 (769)
Q Consensus 139 ~Pd~~d~~edE~emL~ea~arlgN~w~kiAkr-k~R~~~~~k~r~~a~Lqkrr 190 (769)
|++|+++|.+++..+|+.|++||+. +||+.+.+++||+..|.++.
T Consensus 58 -------t~eEd~~L~~~~~~~G~~W~~Ia~~l~gRt~~~~k~rw~~~l~~~~ 103 (131)
T 3zqc_A 58 -------TPEEDETIFRNYLKLGSKWSVIAKLIPGRTDNAIKNRWNSSISKRI 103 (131)
T ss_dssp -------CHHHHHHHHHHHHHSCSCHHHHTTTSTTCCHHHHHHHHHHTTGGGC
T ss_pred -------CHHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 89999999999999988774
No 12
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=99.84 E-value=2.3e-21 Score=177.07 Aligned_cols=98 Identities=26% Similarity=0.357 Sum_probs=93.6
Q ss_pred CCCCCHHHHHHHHHHHHhCCC-Ccccccc-CCCCCHHHHHHHHHHhhhHHhhhccCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy10643 61 KTEWSREEDEKLLHLAKLMPT-QWRTIAP-IIGRTAAQCLERYEFLLDQAQKKEEGEDVADDPRKLKPGEIDPNPETKPA 138 (769)
Q Consensus 61 kg~WT~EEDe~Ll~lvk~~G~-~W~~IA~-l~GRT~~QCreRw~~lL~p~ikk~~~~~~~dd~r~l~pg~~~p~petkpa 138 (769)
+++||+|||++|+.+|..||. +|..||. |+|||+.||++||.++|+|.+++++|
T Consensus 1 K~~Wt~eED~~L~~~v~~~g~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~W------------------------ 56 (107)
T 2k9n_A 1 KVKFTEEEDLKLQQLVMRYGAKDWIRISQLMITRNPRQCRERWNNYINPALRTDPW------------------------ 56 (107)
T ss_dssp CCSSCHHHHHHHHHHHHHHCSSCHHHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCC------------------------
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHHhhhcCCCCHHHHHHHHHHHHccccccccc------------------------
Confidence 589999999999999999995 9999999 99999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhhhHhhcC-chhhhhHHHHHHHHHHHhH
Q psy10643 139 RPDPKDMDEDELEMLSEARARLANTQGKKAKR-KAREKQLEEARRLAALQKR 189 (769)
Q Consensus 139 ~Pd~~d~~edE~emL~ea~arlgN~w~kiAkr-k~R~~~~~k~r~~a~Lqkr 189 (769)
|++|+.+|.+++..+|+.|.+||+. +||+++.+++||...+++.
T Consensus 57 -------T~eEd~~L~~~~~~~G~~W~~Ia~~l~gRt~~~~k~rw~~l~r~~ 101 (107)
T 2k9n_A 57 -------SPEEDMLLDQKYAEYGPKWNKISKFLKNRSDNNIRNRWMMIARHR 101 (107)
T ss_dssp -------CHHHHHHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHHHHhCcCHHHHHHHCCCCCHHHHHHHHHHHHhhH
Confidence 9999999999999999999999999 8999999999999877654
No 13
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=5.6e-19 Score=149.78 Aligned_cols=64 Identities=78% Similarity=1.137 Sum_probs=62.1
Q ss_pred ccccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCCCCCCHHHH
Q psy10643 6 ILKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREED 69 (769)
Q Consensus 6 ~vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~WT~EED 69 (769)
.+++|+||++||++|+.+|.+||.++|..||..|++||+.||+.||.++|+|.+++++||.+||
T Consensus 6 ~~k~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l~~Rt~~qcr~Rw~~~L~p~i~~~~wt~eEd 69 (70)
T 2dim_A 6 SGKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSGPSS 69 (70)
T ss_dssp CSTTCCCCHHHHHHHHHHHHHTCSSCHHHHHHHSTTCCHHHHHHHHHHTSCSSSCCCCSCCSCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHhcCCCHHHHHHHHHHHcCCcccCCCCChHhc
Confidence 3789999999999999999999988999999999999999999999999999999999999997
No 14
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2e-15 Score=126.53 Aligned_cols=61 Identities=79% Similarity=1.204 Sum_probs=59.0
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHhCCCCccccccCCCCCHHHHHHHHHHhhhHHhhhccC
Q psy10643 54 WLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEFLLDQAQKKEEG 114 (769)
Q Consensus 54 ~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~l~GRT~~QCreRw~~lL~p~ikk~~~ 114 (769)
+|+|.+++++||.|||.+|+.+|..||.+|..||.++|||+.||++||+++|++.++++..
T Consensus 2 ~L~P~~~k~~WT~eED~~L~~~~~~~g~~W~~Ia~~~gRt~~qcr~Rw~~~l~~~~~~~~~ 62 (66)
T 2din_A 2 SSGSSGKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDSG 62 (66)
T ss_dssp CCSSSSSCCCCCHHHHHHHHHHHHHCTTCHHHHHHHHSSCHHHHHHHHHHHHHHHHHSSSC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHcCCCHHHHhcccCcCHHHHHHHHHHHhChHhcCCCC
Confidence 7999999999999999999999999999999999988999999999999999999998865
No 15
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=99.54 E-value=3.5e-15 Score=119.32 Aligned_cols=52 Identities=37% Similarity=0.602 Sum_probs=49.6
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPS 58 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ 58 (769)
+++|+||++||++|+.+|.+||..+|..||..|++||+.||+.||.++|+|+
T Consensus 1 l~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~P~ 52 (52)
T 1gvd_A 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPE 52 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHHTTSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcChHHHHHHHcCCCCHHHHHHHHHHHcCcC
Confidence 5789999999999999999999878999999999999999999999999984
No 16
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=3e-15 Score=126.81 Aligned_cols=61 Identities=33% Similarity=0.389 Sum_probs=58.0
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhCC-CCcccccc-CCCCCHHHHHHHHHHhhhHHhhhccCC
Q psy10643 55 LDPSIKKTEWSREEDEKLLHLAKLMP-TQWRTIAP-IIGRTAAQCLERYEFLLDQAQKKEEGE 115 (769)
Q Consensus 55 L~p~ikkg~WT~EEDe~Ll~lvk~~G-~~W~~IA~-l~GRT~~QCreRw~~lL~p~ikk~~~~ 115 (769)
..|.+++++||.+||++|+.+|..|| ++|..||. |+|||+.||++||+++|+|.+++++|+
T Consensus 3 s~~~~k~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l~~Rt~~qcr~Rw~~~L~p~i~~~~wt 65 (70)
T 2dim_A 3 SGSSGKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWS 65 (70)
T ss_dssp SCSCSTTCCCCHHHHHHHHHHHHHTCSSCHHHHHHHSTTCCHHHHHHHHHHTSCSSSCCCCSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHhcCCCHHHHHHHHHHHcCCcccCCCCC
Confidence 35788999999999999999999999 79999999 999999999999999999999999995
No 17
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=99.53 E-value=4.3e-15 Score=118.68 Aligned_cols=52 Identities=33% Similarity=0.538 Sum_probs=48.5
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPS 58 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ 58 (769)
+++|+||++||++|+.+|..||.++|..||..|++||+.||+.||.++|+|+
T Consensus 1 i~~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~P~ 52 (52)
T 1guu_A 1 LGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPE 52 (52)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTSTTCCHHHHHHHHHHHHSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcCCCCHHHHHHHHHHHcCcC
Confidence 5789999999999999999999779999999999999999999999999985
No 18
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=99.53 E-value=6.1e-15 Score=121.24 Aligned_cols=54 Identities=26% Similarity=0.472 Sum_probs=51.9
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIK 60 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ik 60 (769)
+++|+||+|||++|+.+|.+||.++|..||..|++||+.||+.||.++|+|.++
T Consensus 6 ~~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~~~l~p~i~ 59 (60)
T 2d9a_A 6 SGKVKWTHEEDEQLRALVRQFGQQDWKFLASHFPNRTDQQCQYRWLRVLSGPSS 59 (60)
T ss_dssp CCCSCCCHHHHHHHHHHHHHTCTTCHHHHHHHCSSSCHHHHHHHHHHTSCSSSC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHccCCCHHHHHHHHHHHcCCccC
Confidence 678999999999999999999988999999999999999999999999999875
No 19
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=99.53 E-value=4.8e-15 Score=151.52 Aligned_cols=102 Identities=17% Similarity=0.208 Sum_probs=90.1
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCC-----chhHHHHHhhhcChhhhhhhhccccCCCCC---------------------
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKN-----QWSRIASLLHRKSAKQCKARWFEWLDPSIK--------------------- 60 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~-----~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ik--------------------- 60 (769)
++++.||+|||++|+++|.+||.. .|..||++|+|||..||+.||..+|.+.+.
T Consensus 6 ~~k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk~LpGRT~nsIRnRw~~~L~~~ln~vy~~ded~~Li~d~~Gn~ik 85 (246)
T 1ign_A 6 HNKASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRLEYVYEVDKFGKLVRDDDGNLIK 85 (246)
T ss_dssp --CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGGGCCCEECBCTTSCBCBCTTSCBCE
T ss_pred CCCCCCCHHHHHHHHHHHHHhCcCccccccHHHHHHHcCCCCHHHHHHHHHHHHhhhcccccccCcchhhhhccCCCcee
Confidence 567999999999999999999853 299999999999999999999999999886
Q ss_pred --------CCCCCHHHHHHHHHHHHh-C--------------------------------C-------------------
Q psy10643 61 --------KTEWSREEDEKLLHLAKL-M--------------------------------P------------------- 80 (769)
Q Consensus 61 --------kg~WT~EEDe~Ll~lvk~-~--------------------------------G------------------- 80 (769)
+..||.+||-.|...+.+ | +
T Consensus 86 is~lp~siK~rftaeeDy~L~~~i~~~f~~~~~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 165 (246)
T 1ign_A 86 TKVLPPSIKRKFSADEDYTLAIAVKKQFYRDLFQIDPDTGRSLITDEDTPTAIARRNMTMDPNHVPGSEPNFAAYRTQSR 165 (246)
T ss_dssp ESSCCCCSCCCCCHHHHHHHHHHHHHHHHHHHHCBCSSSCCBCC-------------------------------CCCCC
T ss_pred eeccCccccCccchhccHHHHHHHHHHHhhhhhhcCccccccccccccchhhhhhhhcccCccccccCCcchhhhccccc
Confidence 899999999999997765 1 1
Q ss_pred ------CCcccccc-CCCCCHHHHHHHHHHhhhHH
Q psy10643 81 ------TQWRTIAP-IIGRTAAQCLERYEFLLDQA 108 (769)
Q Consensus 81 ------~~W~~IA~-l~GRT~~QCreRw~~lL~p~ 108 (769)
..|..||+ +++||..+.|+||..+|...
T Consensus 166 ~gp~~~~~fk~ia~~~P~HT~~SWRdRyrKfl~~~ 200 (246)
T 1ign_A 166 RGPIAREFFKHFAEEHAAHTENAWRDRFRKFLLAY 200 (246)
T ss_dssp CCCCCTTHHHHHHHHTTTSCHHHHHHHHHHTHHHH
T ss_pred cCcchHHHHHHHHHHCCCCChhhHHHHHHHHHhhc
Confidence 16999999 99999999999999988754
No 20
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=99.48 E-value=1.2e-14 Score=135.68 Aligned_cols=79 Identities=16% Similarity=0.233 Sum_probs=74.7
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHh----hhcChhhhhhhhccccC-----CCCCCC-CCCHHHHHHHHHHH
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLL----HRKSAKQCKARWFEWLD-----PSIKKT-EWSREEDEKLLHLA 76 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~L----p~Rs~~QCr~RW~~~L~-----p~ikkg-~WT~EEDe~Ll~lv 76 (769)
.++++||.|||+.|+.+|.+||.++|+.|+..+ ++||..||++||.+++. |.++++ +|+.+|+.+|+.++
T Consensus 15 r~r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~~~~~p~~krg~~~p~e~~~rv~~~h 94 (121)
T 2juh_A 15 RIRRPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQDLLDRVLAAH 94 (121)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSCCSSCCSHHHHHHHHHHHHHHHTCSTTCCCSCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccccCCCCHHHHHHHHHHHHhhhccCCcccCCCCCCHHHHHHHHHHH
Confidence 678999999999999999999988999999985 89999999999999998 999999 99999999999999
Q ss_pred HhCCCCccc
Q psy10643 77 KLMPTQWRT 85 (769)
Q Consensus 77 k~~G~~W~~ 85 (769)
..+|+.|..
T Consensus 95 ~~~gn~~~~ 103 (121)
T 2juh_A 95 AYWSQQQGK 103 (121)
T ss_dssp HHHHHHHCC
T ss_pred HHHccchhc
Confidence 999998876
No 21
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=99.48 E-value=2.2e-14 Score=121.25 Aligned_cols=59 Identities=24% Similarity=0.380 Sum_probs=56.1
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhh--hcChhhhhhhhccccCCCCCCCCCC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLH--RKSAKQCKARWFEWLDPSIKKTEWS 65 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp--~Rs~~QCr~RW~~~L~p~ikkg~WT 65 (769)
.++|+||+|||++|+.+|.+||.++|..||..|+ +||+.||+.||.++|+|.+.++.++
T Consensus 8 ~~r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l~p~i~k~~~~ 68 (69)
T 1ity_A 8 RKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDSE 68 (69)
T ss_dssp SSCCCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCCSSCCHHHHHHHHHHHHHTSCCCCCCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCcCCCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 6789999999999999999999889999999999 9999999999999999999988764
No 22
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=99.46 E-value=2e-14 Score=118.18 Aligned_cols=55 Identities=31% Similarity=0.530 Sum_probs=51.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCC-CCcccccc-CCCCCHHHHHHHHHHhhhHHhh
Q psy10643 56 DPSIKKTEWSREEDEKLLHLAKLMP-TQWRTIAP-IIGRTAAQCLERYEFLLDQAQK 110 (769)
Q Consensus 56 ~p~ikkg~WT~EEDe~Ll~lvk~~G-~~W~~IA~-l~GRT~~QCreRw~~lL~p~ik 110 (769)
+|.+++++||+|||++|+++|..|| ++|..||. |+|||+.||++||+++|+|.++
T Consensus 3 ~p~~~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~~~l~p~i~ 59 (60)
T 2d9a_A 3 SGSSGKVKWTHEEDEQLRALVRQFGQQDWKFLASHFPNRTDQQCQYRWLRVLSGPSS 59 (60)
T ss_dssp SCCCCCSCCCHHHHHHHHHHHHHTCTTCHHHHHHHCSSSCHHHHHHHHHHTSCSSSC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHccCCCHHHHHHHHHHHcCCccC
Confidence 5789999999999999999999999 69999999 9999999999999999998764
No 23
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=99.46 E-value=2.6e-14 Score=119.55 Aligned_cols=55 Identities=29% Similarity=0.421 Sum_probs=50.1
Q ss_pred ccccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhh--hcChhhhhhhhccccCCCCC
Q psy10643 6 ILKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLH--RKSAKQCKARWFEWLDPSIK 60 (769)
Q Consensus 6 ~vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp--~Rs~~QCr~RW~~~L~p~ik 60 (769)
+.|+++||+|||++|+.+|.+||.++|..||..++ +||+.||++||.++++|+++
T Consensus 8 ~~kk~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~nl~k~glN 64 (64)
T 3sjm_A 8 ITKKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGMN 64 (64)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCCHHHHHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHHHHHHHhccCCC
Confidence 37899999999999999999999889999999976 99999999999999998764
No 24
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=99.46 E-value=1.4e-14 Score=124.33 Aligned_cols=59 Identities=22% Similarity=0.313 Sum_probs=46.2
Q ss_pred hhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCCCcccccc-CCCCCHHHHHHHHHHhh
Q psy10643 46 QCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLERYEFLL 105 (769)
Q Consensus 46 QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~-l~GRT~~QCreRw~~lL 105 (769)
...-||.++|+|++++++||+|||++|+++|..||++|+.||+ | |||+.||++||+.+.
T Consensus 8 ~~~~~~~~~ldP~i~k~~wT~EED~~L~~l~~~~G~kW~~IA~~l-gRt~~q~knRw~~L~ 67 (73)
T 2llk_A 8 SSGRENLYFQGDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAAL-GRSASSVKDRCRLMK 67 (73)
T ss_dssp -----------CCCCCCSSCHHHHHHHHHHHHHHSSCHHHHHHHH-TSCHHHHHHHHHHCS
T ss_pred ccCcceeeecCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHh-CCCHHHHHHHHHHHH
Confidence 3456899999999999999999999999999999999999999 8 999999999998654
No 25
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=99.46 E-value=4.6e-14 Score=131.91 Aligned_cols=75 Identities=19% Similarity=0.285 Sum_probs=70.5
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHh----hhcChhhhhhhhcccc-----CCCCCCCCCCHHH-HHHHHHHH
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLL----HRKSAKQCKARWFEWL-----DPSIKKTEWSREE-DEKLLHLA 76 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~L----p~Rs~~QCr~RW~~~L-----~p~ikkg~WT~EE-De~Ll~lv 76 (769)
.++++||.|||+.|+.+|.+||.++|..|+..+ ++||..||++||.+++ +|.++++.|+++| +.+|+.++
T Consensus 29 r~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlKdRWrnllk~~~~~p~~kr~~~~p~e~~~~v~~~h 108 (122)
T 2roh_A 29 RIRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKWKTLVHTASIAPQQRRGAPVPQELLDRVLAAQ 108 (122)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHHHHHHHHHHHHHSCTTTCCCSSCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHH
Confidence 467899999999999999999988999999975 7999999999999999 8999999999999 89999999
Q ss_pred HhCCC
Q psy10643 77 KLMPT 81 (769)
Q Consensus 77 k~~G~ 81 (769)
..+|+
T Consensus 109 ~~~g~ 113 (122)
T 2roh_A 109 AYWSV 113 (122)
T ss_dssp HHHHS
T ss_pred HHHhh
Confidence 99885
No 26
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=99.44 E-value=3.7e-14 Score=132.36 Aligned_cols=82 Identities=23% Similarity=0.331 Sum_probs=71.9
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHhCCC-Ccccccc-C----CCCCHHHHHHHHHHhhh-----HHhhhccCCCCCCCCCC
Q psy10643 55 LDPSIKKTEWSREEDEKLLHLAKLMPT-QWRTIAP-I----IGRTAAQCLERYEFLLD-----QAQKKEEGEDVADDPRK 123 (769)
Q Consensus 55 L~p~ikkg~WT~EEDe~Ll~lvk~~G~-~W~~IA~-l----~GRT~~QCreRw~~lL~-----p~ikk~~~~~~~dd~r~ 123 (769)
+.+..++++||.|||+.|+.+|.+||. +|+.|+. + +|||+.+|++||.++++ |.++++ |
T Consensus 11 ~~~rr~r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~~~~~p~~krg-~--------- 80 (121)
T 2juh_A 11 LSQRRIRRPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRG-E--------- 80 (121)
T ss_dssp CCCCCSSCCCCHHHHHHHHHHHHHHGGGCHHHHHHHHCSCCSSCCSHHHHHHHHHHHHHHHTCSTTCCC-S---------
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHhccccCCCCHHHHHHHHHHHHhhhccCCcccCC-C---------
Confidence 567788999999999999999999996 9999998 3 79999999999999998 444432 1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhhhhhH
Q psy10643 124 LKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGK 166 (769)
Q Consensus 124 l~pg~~~p~petkpa~Pd~~d~~edE~emL~ea~arlgN~w~k 166 (769)
.++++++..|.++++.+||+|+|
T Consensus 81 --------------------~~p~e~~~rv~~~h~~~gn~~~~ 103 (121)
T 2juh_A 81 --------------------PVPQDLLDRVLAAHAYWSQQQGK 103 (121)
T ss_dssp --------------------CCCHHHHHHHHHHHHHHHHHHCC
T ss_pred --------------------CCCHHHHHHHHHHHHHHccchhc
Confidence 34889999999999999999998
No 27
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=99.42 E-value=1.4e-13 Score=113.43 Aligned_cols=53 Identities=17% Similarity=0.334 Sum_probs=49.9
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSI 59 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~i 59 (769)
+++++||++||++|+.+|..||.++|..||..|++||+.||+.||.++|.+..
T Consensus 6 ~~~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~r~~~~l~~~~ 58 (60)
T 1x41_A 6 SGDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKYFSGPS 58 (60)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCTTCHHHHHHHHTTSCHHHHHHHHHHHTTCSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcCcHHHHHHHhCCCCHHHHHHHHHHHccCCC
Confidence 67899999999999999999998899999999999999999999999998753
No 28
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=99.41 E-value=6.6e-14 Score=111.87 Aligned_cols=49 Identities=35% Similarity=0.713 Sum_probs=46.5
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCC-Ccccccc-CCCCCHHHHHHHHHHhhhH
Q psy10643 59 IKKTEWSREEDEKLLHLAKLMPT-QWRTIAP-IIGRTAAQCLERYEFLLDQ 107 (769)
Q Consensus 59 ikkg~WT~EEDe~Ll~lvk~~G~-~W~~IA~-l~GRT~~QCreRw~~lL~p 107 (769)
+++++||++||.+|+++|..||. +|..||. |+|||+.||++||.++|+|
T Consensus 1 l~k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~P 51 (52)
T 1gvd_A 1 LIKGPWTKEEDQRLIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNP 51 (52)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCTTCHHHHHTTSTTCCHHHHHHHHHHTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcChHHHHHHHcCCCCHHHHHHHHHHHcCc
Confidence 47899999999999999999996 7999999 8999999999999999987
No 29
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=99.41 E-value=5.7e-14 Score=112.13 Aligned_cols=50 Identities=42% Similarity=0.738 Sum_probs=46.0
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCC-Ccccccc-CCCCCHHHHHHHHHHhhhHH
Q psy10643 59 IKKTEWSREEDEKLLHLAKLMPT-QWRTIAP-IIGRTAAQCLERYEFLLDQA 108 (769)
Q Consensus 59 ikkg~WT~EEDe~Ll~lvk~~G~-~W~~IA~-l~GRT~~QCreRw~~lL~p~ 108 (769)
+++++||.+||.+|+++|..||. +|..||. |+|||+.||++||+++|+|.
T Consensus 1 i~~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~Rw~~~L~P~ 52 (52)
T 1guu_A 1 LGKTRWTREEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPE 52 (52)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTSTTCCHHHHHHHHHHHHSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCHHHHHHHcCCCCHHHHHHHHHHHcCcC
Confidence 46899999999999999999997 9999999 89999999999999999873
No 30
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=99.39 E-value=1.6e-13 Score=110.19 Aligned_cols=49 Identities=29% Similarity=0.474 Sum_probs=46.6
Q ss_pred ccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhh--hcChhhhhhhhccccC
Q psy10643 8 KRWVIFVFQDEILKAAVMKYGKNQWSRIASLLH--RKSAKQCKARWFEWLD 56 (769)
Q Consensus 8 KkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp--~Rs~~QCr~RW~~~L~ 56 (769)
|+|+||+|||+.|+.+|.+||.++|..||..|+ +||+.||++||.+++.
T Consensus 1 kr~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 1 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKK 51 (53)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHcCCCCCCHHHHHHHHHHHHc
Confidence 579999999999999999999889999999999 9999999999999874
No 31
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=99.39 E-value=1.4e-13 Score=116.26 Aligned_cols=61 Identities=18% Similarity=0.234 Sum_probs=56.0
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHhCC-CCcccccc-CC--CCCHHHHHHHHHHhhhHHhhhccC
Q psy10643 54 WLDPSIKKTEWSREEDEKLLHLAKLMP-TQWRTIAP-II--GRTAAQCLERYEFLLDQAQKKEEG 114 (769)
Q Consensus 54 ~L~p~ikkg~WT~EEDe~Ll~lvk~~G-~~W~~IA~-l~--GRT~~QCreRw~~lL~p~ikk~~~ 114 (769)
..++..++++||+|||++|+.+|..|| ++|..||. |+ |||+.||++||.++|+|.+.+...
T Consensus 3 ~~~~~~~r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l~p~i~k~~~ 67 (69)
T 1ity_A 3 EKHRARKRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKKLKLISSDS 67 (69)
T ss_dssp CTTCSSSCCCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCCSSCCHHHHHHHHHHHHHTSCCCCCC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCcCCCCHHHHHHHHHHHcCCCCCCCCC
Confidence 356778899999999999999999999 69999999 88 999999999999999999988764
No 32
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.37 E-value=2.8e-13 Score=115.41 Aligned_cols=58 Identities=21% Similarity=0.169 Sum_probs=55.2
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHhCCCCcccccc-CCCCCHHHHHHHHHHhhhHHhhh
Q psy10643 54 WLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLERYEFLLDQAQKK 111 (769)
Q Consensus 54 ~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~-l~GRT~~QCreRw~~lL~p~ikk 111 (769)
.++|.+++++||.|||++|+++|..||.+|..||. |+|||+.||++||+++|.+.++.
T Consensus 2 s~~p~~~~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~~~Rt~~q~k~r~~~~l~~~~~~ 60 (72)
T 2cu7_A 2 SSGSSGYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVKC 60 (72)
T ss_dssp CCCCSSCCCCCCHHHHHHHHHHHHHTCSCHHHHHHHHSSSCHHHHHHHHHHHHHHHSCS
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHHHHhc
Confidence 36899999999999999999999999999999999 99999999999999999998776
No 33
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=99.36 E-value=4.5e-13 Score=109.79 Aligned_cols=49 Identities=14% Similarity=0.226 Sum_probs=46.1
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhh-hcChhhhhhhhcccc
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLH-RKSAKQCKARWFEWL 55 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp-~Rs~~QCr~RW~~~L 55 (769)
+.++.||++||++|+++|.+||.++|..||..|+ +||+.||+.||.+++
T Consensus 7 ~~~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~~~~Rt~~qcr~r~~~~~ 56 (58)
T 2elk_A 7 GFDENWGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTY 56 (58)
T ss_dssp SCCCCCCHHHHHHHHHHHHHTTTTCHHHHHHHHCSSCCHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHHCCCCCHHHHHHHHHHHc
Confidence 4578999999999999999999889999999999 999999999999865
No 34
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=99.34 E-value=5.1e-13 Score=124.91 Aligned_cols=80 Identities=18% Similarity=0.232 Sum_probs=68.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCC-Ccccccc-C----CCCCHHHHHHHHHHhh-----hHHhhhccCCCCCCCCCCC
Q psy10643 56 DPSIKKTEWSREEDEKLLHLAKLMPT-QWRTIAP-I----IGRTAAQCLERYEFLL-----DQAQKKEEGEDVADDPRKL 124 (769)
Q Consensus 56 ~p~ikkg~WT~EEDe~Ll~lvk~~G~-~W~~IA~-l----~GRT~~QCreRw~~lL-----~p~ikk~~~~~~~dd~r~l 124 (769)
....++++||.|||+.|+++|.+||. +|..|+. + .|||+.+|++||.+++ +|.++++.|
T Consensus 26 ~~rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlKdRWrnllk~~~~~p~~kr~~~---------- 95 (122)
T 2roh_A 26 GQRRIRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKWKTLVHTASIAPQQRRGAP---------- 95 (122)
T ss_dssp CCCCCCCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHHHHHHHHHHHHHSCTTTCCCSS----------
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhccCCccccCCCC----------
Confidence 34567899999999999999999995 9999998 3 7999999999999999 455555443
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHHhhhhhhH
Q psy10643 125 KPGEIDPNPETKPARPDPKDMDEDE-LEMLSEARARLANTQGK 166 (769)
Q Consensus 125 ~pg~~~p~petkpa~Pd~~d~~edE-~emL~ea~arlgN~w~k 166 (769)
+++| +..|.+||+.+||.+++
T Consensus 96 ---------------------~p~e~~~~v~~~h~~~g~~~~~ 117 (122)
T 2roh_A 96 ---------------------VPQELLDRVLAAQAYWSVDSSG 117 (122)
T ss_dssp ---------------------CCHHHHHHHHHHHHHHHSSCSC
T ss_pred ---------------------CCHHHHHHHHHHHHHHhhHHhh
Confidence 7777 78899999999999875
No 35
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=99.32 E-value=6.5e-13 Score=109.41 Aligned_cols=52 Identities=19% Similarity=0.388 Sum_probs=48.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCC-CCcccccc-CCCCCHHHHHHHHHHhhhH
Q psy10643 56 DPSIKKTEWSREEDEKLLHLAKLMP-TQWRTIAP-IIGRTAAQCLERYEFLLDQ 107 (769)
Q Consensus 56 ~p~ikkg~WT~EEDe~Ll~lvk~~G-~~W~~IA~-l~GRT~~QCreRw~~lL~p 107 (769)
.+.+.+++||++||.+|+++|..|| ++|..||. ++|||+.||++||+++|.+
T Consensus 3 s~~~~~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~Rt~~qcr~r~~~~l~~ 56 (60)
T 1x41_A 3 SGSSGDPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKYFSG 56 (60)
T ss_dssp CCCCCCSSSCHHHHHHHHHHHHHTCTTCHHHHHHHHTTSCHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCcCcHHHHHHHhCCCCHHHHHHHHHHHccC
Confidence 4678899999999999999999999 79999999 9999999999999999864
No 36
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=99.32 E-value=3.1e-12 Score=130.93 Aligned_cols=129 Identities=20% Similarity=0.192 Sum_probs=94.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCC------cccccc-CCCCCHHHHHHHHHHhhhHHhhhccCCCCCCCCCCCCCCCC
Q psy10643 57 PSIKKTEWSREEDEKLLHLAKLMPTQ------WRTIAP-IIGRTAAQCLERYEFLLDQAQKKEEGEDVADDPRKLKPGEI 129 (769)
Q Consensus 57 p~ikkg~WT~EEDe~Ll~lvk~~G~~------W~~IA~-l~GRT~~QCreRw~~lL~p~ikk~~~~~~~dd~r~l~pg~~ 129 (769)
+.+++++||+|||+.|+++|.++|+. |..||+ |+|||++|||+||+.+|++.++.. |...+ +..-++--.
T Consensus 4 ~~~~k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk~LpGRT~nsIRnRw~~~L~~~ln~v-y~~de-d~~Li~d~~- 80 (246)
T 1ign_A 4 PSHNKASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRLEYV-YEVDK-FGKLVRDDD- 80 (246)
T ss_dssp ----CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGGGCCCE-ECBCT-TSCBCBCTT-
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCcCccccccHHHHHHHcCCCCHHHHHHHHHHHHhhhcccc-cccCc-chhhhhccC-
Confidence 45778999999999999999999874 999999 999999999999999999998855 54322 222111111
Q ss_pred CCCCCCCCCCCCC--CCCCHHHHHHHHHHHHH---------------------------------hhh------------
Q psy10643 130 DPNPETKPARPDP--KDMDEDELEMLSEARAR---------------------------------LAN------------ 162 (769)
Q Consensus 130 ~p~petkpa~Pd~--~d~~edE~emL~ea~ar---------------------------------lgN------------ 162 (769)
.+.--+. -.|.. ..|+.+|+-.|...... ++.
T Consensus 81 Gn~ikis-~lp~siK~rftaeeDy~L~~~i~~~f~~~~~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 159 (246)
T 1ign_A 81 GNLIKTK-VLPPSIKRKFSADEDYTLAIAVKKQFYRDLFQIDPDTGRSLITDEDTPTAIARRNMTMDPNHVPGSEPNFAA 159 (246)
T ss_dssp SCBCEES-SCCCCSCCCCCHHHHHHHHHHHHHHHHHHHHCBCSSSCCBCC------------------------------
T ss_pred CCceeee-ccCccccCccchhccHHHHHHHHHHHhhhhhhcCccccccccccccchhhhhhhhcccCccccccCCcchhh
Confidence 1111111 34443 68999999888887765 222
Q ss_pred -------------hhhHhhcC-chhhhhHHHHHHHHHHHhH
Q psy10643 163 -------------TQGKKAKR-KAREKQLEEARRLAALQKR 189 (769)
Q Consensus 163 -------------~w~kiAkr-k~R~~~~~k~r~~a~Lqkr 189 (769)
.|..+|+. +.|+.+..++||.-.|.+.
T Consensus 160 ~~~~~~~gp~~~~~fk~ia~~~P~HT~~SWRdRyrKfl~~~ 200 (246)
T 1ign_A 160 YRTQSRRGPIAREFFKHFAEEHAAHTENAWRDRFRKFLLAY 200 (246)
T ss_dssp -CCCCCCCCCCTTHHHHHHHHTTTSCHHHHHHHHHHTHHHH
T ss_pred hccccccCcchHHHHHHHHHHCCCCChhhHHHHHHHHHhhc
Confidence 79999999 9999999999999776544
No 37
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=6.9e-13 Score=113.65 Aligned_cols=58 Identities=21% Similarity=0.231 Sum_probs=53.1
Q ss_pred cccCCCCHHHHHHHHHHHHHhCC-----CchhHHHHHhhhcChhhhhhhhccccCCCCCCCCC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGK-----NQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEW 64 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~-----~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~W 64 (769)
++++.||.|||++|+.+|..||. ++|..||.+|++||..||+.||+++|.+.++.+..
T Consensus 6 ~~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~~Rt~~qcr~r~~~~l~~~~k~g~~ 68 (75)
T 2yum_A 6 SGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQVQKYFIKLTKAGIP 68 (75)
T ss_dssp CCSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHSSSCHHHHHHHHHHHHGGGSTTCSC
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcCCC
Confidence 67799999999999999999996 79999999999999999999999999887766543
No 38
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=4.8e-13 Score=112.01 Aligned_cols=54 Identities=22% Similarity=0.226 Sum_probs=49.9
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCCC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKT 62 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg 62 (769)
++++.||.|||++|+.+|..||. +|..||. |++||+.||+.||.++|+|.++++
T Consensus 7 ~~k~~WT~eED~~L~~~~~~~g~-~W~~Ia~-~~gRt~~qcr~Rw~~~l~~~~~~~ 60 (66)
T 2din_A 7 GKKTEWSREEEEKLLHLAKLMPT-QWRTIAP-IIGRTAAQCLEHYEFLLDKAAQRD 60 (66)
T ss_dssp SSCCCCCHHHHHHHHHHHHHCTT-CHHHHHH-HHSSCHHHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCCHHHHHHHHHHHHHcCC-CHHHHhc-ccCcCHHHHHHHHHHHhChHhcCC
Confidence 67899999999999999999995 9999999 888999999999999998876654
No 39
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=99.30 E-value=8.4e-13 Score=110.44 Aligned_cols=52 Identities=23% Similarity=0.325 Sum_probs=47.0
Q ss_pred CCCCCCCHHHHHHHHHHHHhCC-CCcccccc-CC--CCCHHHHHHHHHHhhhHHhh
Q psy10643 59 IKKTEWSREEDEKLLHLAKLMP-TQWRTIAP-II--GRTAAQCLERYEFLLDQAQK 110 (769)
Q Consensus 59 ikkg~WT~EEDe~Ll~lvk~~G-~~W~~IA~-l~--GRT~~QCreRw~~lL~p~ik 110 (769)
.++++||+|||++|+++|..|| ++|..||. ++ |||+.||++||.+++++.++
T Consensus 9 ~kk~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~nl~k~glN 64 (64)
T 3sjm_A 9 TKKQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMKRLGMN 64 (64)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCHHHHHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHHHHHHHhccCCC
Confidence 4689999999999999999999 59999998 55 99999999999999998763
No 40
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=99.28 E-value=1.4e-12 Score=104.69 Aligned_cols=47 Identities=23% Similarity=0.376 Sum_probs=44.5
Q ss_pred CCCCCCHHHHHHHHHHHHhCC-CCcccccc-CC--CCCHHHHHHHHHHhhh
Q psy10643 60 KKTEWSREEDEKLLHLAKLMP-TQWRTIAP-II--GRTAAQCLERYEFLLD 106 (769)
Q Consensus 60 kkg~WT~EEDe~Ll~lvk~~G-~~W~~IA~-l~--GRT~~QCreRw~~lL~ 106 (769)
++++||+|||+.|+.+|..|| ++|..||. ++ |||+.||++||.++++
T Consensus 1 kr~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 1 KRQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMKK 51 (53)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHcCCCCCCHHHHHHHHHHHHc
Confidence 478999999999999999999 69999999 88 9999999999999985
No 41
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=1.2e-12 Score=112.25 Aligned_cols=58 Identities=28% Similarity=0.345 Sum_probs=53.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCC------CCcccccc-CCCCCHHHHHHHHHHhhhHHhhhcc
Q psy10643 56 DPSIKKTEWSREEDEKLLHLAKLMP------TQWRTIAP-IIGRTAAQCLERYEFLLDQAQKKEE 113 (769)
Q Consensus 56 ~p~ikkg~WT~EEDe~Ll~lvk~~G------~~W~~IA~-l~GRT~~QCreRw~~lL~p~ikk~~ 113 (769)
+|.+.+++||.|||.+|+++|..|| .+|..||. |+|||+.||++||++||.+.++.+.
T Consensus 3 ~p~~~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~~Rt~~qcr~r~~~~l~~~~k~g~ 67 (75)
T 2yum_A 3 SGSSGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQVQKYFIKLTKAGI 67 (75)
T ss_dssp CCCCCSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHSSSCHHHHHHHHHHHHGGGSTTCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcCC
Confidence 5788999999999999999999999 68999999 9999999999999999998776653
No 42
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=99.25 E-value=2.1e-12 Score=110.07 Aligned_cols=54 Identities=17% Similarity=0.353 Sum_probs=50.0
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKK 61 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikk 61 (769)
+++|+||.|||++|+.+|..||. +|..||.+|++||..||+.||+.+|.+.++.
T Consensus 7 ~~~~~WT~eEd~~l~~~~~~~G~-~W~~Ia~~~~~Rt~~q~k~r~~~~l~~~~~~ 60 (72)
T 2cu7_A 7 GYSVKWTIEEKELFEQGLAKFGR-RWTKISKLIGSRTVLQVKSYARQYFKNKVKC 60 (72)
T ss_dssp SCCCCCCHHHHHHHHHHHHHTCS-CHHHHHHHHSSSCHHHHHHHHHHHHHHHSCS
T ss_pred cCCCCCCHHHHHHHHHHHHHHCc-CHHHHHHHcCCCCHHHHHHHHHHHHHHHHhc
Confidence 78899999999999999999995 9999999999999999999999998775554
No 43
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=99.24 E-value=4.4e-12 Score=103.91 Aligned_cols=50 Identities=22% Similarity=0.411 Sum_probs=46.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCC-CCcccccc-CC-CCCHHHHHHHHHHhh
Q psy10643 56 DPSIKKTEWSREEDEKLLHLAKLMP-TQWRTIAP-II-GRTAAQCLERYEFLL 105 (769)
Q Consensus 56 ~p~ikkg~WT~EEDe~Ll~lvk~~G-~~W~~IA~-l~-GRT~~QCreRw~~lL 105 (769)
+..+.+++||.+||.+|+++|..|| ++|..||. ++ |||+.||++||.+++
T Consensus 4 ~~p~~~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~~~~Rt~~qcr~r~~~~~ 56 (58)
T 2elk_A 4 GSSGFDENWGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTY 56 (58)
T ss_dssp CCCSCCCCCCHHHHHHHHHHHHHTTTTCHHHHHHHHCSSCCHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCcCCHHHHHHHHCCCCCHHHHHHHHHHHc
Confidence 3457789999999999999999999 89999999 88 899999999999875
No 44
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=99.16 E-value=3.1e-11 Score=103.53 Aligned_cols=52 Identities=23% Similarity=0.201 Sum_probs=46.2
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCCCC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKK 61 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikk 61 (769)
+++|+||+|||++|+.+|.+||. .|..||+.| +||+.||+.||+. |....+.
T Consensus 21 i~k~~wT~EED~~L~~l~~~~G~-kW~~IA~~l-gRt~~q~knRw~~-L~~~~~~ 72 (73)
T 2llk_A 21 NHVGKYTPEEIEKLKELRIKHGN-DWATIGAAL-GRSASSVKDRCRL-MKDTCNT 72 (73)
T ss_dssp CCCCSSCHHHHHHHHHHHHHHSS-CHHHHHHHH-TSCHHHHHHHHHH-CSCCCSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCC-CHHHHHHHh-CCCHHHHHHHHHH-HHHHccC
Confidence 68899999999999999999995 799999999 9999999999975 5554443
No 45
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=98.76 E-value=3.6e-12 Score=113.13 Aligned_cols=55 Identities=18% Similarity=0.179 Sum_probs=51.7
Q ss_pred cccCCCCCCCCCCHHHHHHHHHHHHhCCCCcccccc-CCCCCHHHHHHHHHHhhhH
Q psy10643 53 EWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLERYEFLLDQ 107 (769)
Q Consensus 53 ~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~-l~GRT~~QCreRw~~lL~p 107 (769)
..++|.+++++||.+||.+|+++|..||.+|..||. |+|||+.||++||+++|..
T Consensus 8 ~~~~p~~~~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l~gRt~~q~k~r~~~~lrk 63 (89)
T 2ltp_A 8 SSGRENLYFQGWTEEEMGTAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKR 63 (89)
Confidence 357889999999999999999999999999999999 9999999999999999875
No 46
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=99.15 E-value=4.5e-11 Score=104.93 Aligned_cols=68 Identities=16% Similarity=0.272 Sum_probs=59.6
Q ss_pred CCCCHHHHHHHHHHHHHhCCCchhHHHHH----hhhcChhhhhhhhcccc-----CCCCCCC-CCCHHHHHHHHHHHH
Q psy10643 10 WVIFVFQDEILKAAVMKYGKNQWSRIASL----LHRKSAKQCKARWFEWL-----DPSIKKT-EWSREEDEKLLHLAK 77 (769)
Q Consensus 10 G~WT~EEDe~L~~~V~kyG~~~W~~IA~~----Lp~Rs~~QCr~RW~~~L-----~p~ikkg-~WT~EEDe~Ll~lvk 77 (769)
++||.|||+.|+.+|.+||.++|..|+.. |++||..||++||.+++ +|.++++ +...+...+++.+..
T Consensus 1 r~WT~eEd~~L~~gv~k~G~g~W~~I~~~~~~~~~~RT~~~lKdrWrnllk~~~~~p~~~~~~~~p~~~~~rv~~~~a 78 (83)
T 2ckx_A 1 RPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQDLLDRVLAAHA 78 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGGGCCSSCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCcHHHHHhhccccCCCCHHHHHHHHHHHHHhccCCcccccCCCCCHHHHHHHHHHHH
Confidence 47999999999999999998899999996 89999999999999987 6765554 578888888888764
No 47
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=99.11 E-value=6.7e-11 Score=108.04 Aligned_cols=52 Identities=19% Similarity=0.288 Sum_probs=46.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCC-Ccccccc-C----CCCCHHHHHHHHHHhhhH
Q psy10643 56 DPSIKKTEWSREEDEKLLHLAKLMPT-QWRTIAP-I----IGRTAAQCLERYEFLLDQ 107 (769)
Q Consensus 56 ~p~ikkg~WT~EEDe~Ll~lvk~~G~-~W~~IA~-l----~GRT~~QCreRw~~lL~p 107 (769)
.+..++++||.|||+.|+..|.+||. +|+.|+. + +|||+.+|++||.+++..
T Consensus 8 ~~rr~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~f~~RT~v~lKdrWrnllk~ 65 (105)
T 2aje_A 8 PQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHT 65 (105)
T ss_dssp -CCCCCCSCCHHHHHHHHHHHHHHCSSSHHHHHSSSSSSTTCCCHHHHHHHHHHHHHT
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 44677899999999999999999995 9999999 4 799999999999999963
No 48
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=99.10 E-value=6.7e-11 Score=102.86 Aligned_cols=47 Identities=11% Similarity=0.282 Sum_probs=45.0
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccc
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEW 54 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~ 54 (769)
..++.||.+||++|+++|.+|| ++|..||.+|++||+.||+.||.++
T Consensus 16 ~~~~~WT~eEd~~Ll~~v~~~G-~~W~~IA~~v~~RT~~qcr~r~~~~ 62 (79)
T 2yus_A 16 SAGREWTEQETLLLLEALEMYK-DDWNKVSEHVGSRTQDECILHFLRL 62 (79)
T ss_dssp CCSCCCCHHHHHHHHHHHHHSS-SCHHHHHHHHSSCCHHHHHHHHTTS
T ss_pred ccCCCcCHHHHHHHHHHHHHhC-CCHHHHHHHcCCCCHHHHHHHHHHh
Confidence 4578999999999999999999 8999999999999999999999997
No 49
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=99.06 E-value=7.6e-11 Score=107.67 Aligned_cols=74 Identities=20% Similarity=0.250 Sum_probs=64.0
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHh----hhcChhhhhhhhcccc-----CCCCCCCCCCHHHHHH-HHHHH
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLL----HRKSAKQCKARWFEWL-----DPSIKKTEWSREEDEK-LLHLA 76 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~L----p~Rs~~QCr~RW~~~L-----~p~ikkg~WT~EEDe~-Ll~lv 76 (769)
.++++||.|||+.|+.+|.+||.++|..|+..+ ++||..+|++||.+++ +|.++++.-++.|-.. +++++
T Consensus 11 r~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~f~~RT~v~lKdrWrnllk~~~~~p~~~rg~~~P~~~l~rv~~~~ 90 (105)
T 2aje_A 11 RIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVLNAH 90 (105)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCSSSHHHHHSSSSSSTTCCCHHHHHHHHHHHHHTTTCCTTTTTCCSCCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhccCCcccccCCCCCHHHHHHHHHHH
Confidence 678999999999999999999988999999965 7999999999999988 7999999888777554 66666
Q ss_pred HhCC
Q psy10643 77 KLMP 80 (769)
Q Consensus 77 k~~G 80 (769)
..++
T Consensus 91 ~~~~ 94 (105)
T 2aje_A 91 GYWT 94 (105)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 50
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=98.59 E-value=2.8e-11 Score=107.34 Aligned_cols=51 Identities=24% Similarity=0.331 Sum_probs=47.6
Q ss_pred ccccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCC
Q psy10643 6 ILKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDP 57 (769)
Q Consensus 6 ~vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p 57 (769)
.+++|+||.+||++|+.+|..||. +|..||.+|++||..||+.||+++|..
T Consensus 13 ~~~~~~WT~eEd~~l~~~~~~~G~-~W~~IA~~l~gRt~~q~k~r~~~~lrk 63 (89)
T 2ltp_A 13 NLYFQGWTEEEMGTAKKGLLEHGR-NWSAIARMVGSKTVSQCKNFYFNYKKR 63 (89)
Confidence 377899999999999999999995 899999999999999999999998764
No 51
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=98.99 E-value=4.3e-10 Score=98.72 Aligned_cols=47 Identities=23% Similarity=0.351 Sum_probs=43.3
Q ss_pred CCCCHHHHHHHHHHHHhCCC-Ccccccc-----CCCCCHHHHHHHHHHhhhHH
Q psy10643 62 TEWSREEDEKLLHLAKLMPT-QWRTIAP-----IIGRTAAQCLERYEFLLDQA 108 (769)
Q Consensus 62 g~WT~EEDe~Ll~lvk~~G~-~W~~IA~-----l~GRT~~QCreRw~~lL~p~ 108 (769)
.+||.|||+.|+.+|.+||. +|+.|+. |+|||+.+|++||.++++..
T Consensus 1 r~WT~eEd~~L~~gv~k~G~g~W~~I~~~~~~~~~~RT~~~lKdrWrnllk~~ 53 (83)
T 2ckx_A 1 RPFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTA 53 (83)
T ss_dssp CCCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCcHHHHHhhccccCCCCHHHHHHHHHHHHHhc
Confidence 48999999999999999995 9999997 68999999999999999644
No 52
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=98.99 E-value=1.2e-10 Score=99.87 Aligned_cols=50 Identities=24% Similarity=0.344 Sum_probs=45.8
Q ss_pred cccCCCCHHHHHHHHHHHHHhC---CCchhHHHHHhhhcChhhhhhhhccccC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYG---KNQWSRIASLLHRKSAKQCKARWFEWLD 56 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG---~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~ 56 (769)
+.++.||.+||.+|..+|..|| .++|..||.+|||||..||+.||..++.
T Consensus 16 ~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vpGRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 16 SAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLLVS 68 (73)
T ss_dssp CSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 5678999999999999999999 3589999999999999999999998654
No 53
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=98.98 E-value=2.2e-10 Score=98.21 Aligned_cols=50 Identities=20% Similarity=0.544 Sum_probs=46.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhCC----CCcccccc-CCCCCHHHHHHHHHHhhh
Q psy10643 57 PSIKKTEWSREEDEKLLHLAKLMP----TQWRTIAP-IIGRTAAQCLERYEFLLD 106 (769)
Q Consensus 57 p~ikkg~WT~EEDe~Ll~lvk~~G----~~W~~IA~-l~GRT~~QCreRw~~lL~ 106 (769)
+.+.+++||.+||.+|+.++..|| .+|..||. |+|||..||++||++++.
T Consensus 14 ~~~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vpGRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 14 ARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLLVS 68 (73)
T ss_dssp TTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHHHS
T ss_pred cccCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999 58999999 899999999999999875
No 54
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=98.95 E-value=2.1e-10 Score=99.75 Aligned_cols=47 Identities=21% Similarity=0.488 Sum_probs=44.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCCcccccc-CCCCCHHHHHHHHHHh
Q psy10643 58 SIKKTEWSREEDEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLERYEFL 104 (769)
Q Consensus 58 ~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~-l~GRT~~QCreRw~~l 104 (769)
...+++||.+||.+|+++|..||.+|..||. ++|||+.||++||.++
T Consensus 15 ~~~~~~WT~eEd~~Ll~~v~~~G~~W~~IA~~v~~RT~~qcr~r~~~~ 62 (79)
T 2yus_A 15 ASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRL 62 (79)
T ss_dssp SCCSCCCCHHHHHHHHHHHHHSSSCHHHHHHHHSSCCHHHHHHHHTTS
T ss_pred cccCCCcCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHHHh
Confidence 4567899999999999999999999999999 8999999999999987
No 55
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=98.76 E-value=3.9e-09 Score=94.51 Aligned_cols=49 Identities=10% Similarity=0.230 Sum_probs=43.7
Q ss_pred cccCCCCHHHHHHHHHHHHHhC---CCchhHHHHHhhhcChhhhhhhhcccc
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYG---KNQWSRIASLLHRKSAKQCKARWFEWL 55 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG---~~~W~~IA~~Lp~Rs~~QCr~RW~~~L 55 (769)
-.++.||.+||++|..++..|| .+.|..||..|||||..||+.||..++
T Consensus 6 ~~~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vpGRT~~q~k~ry~~l~ 57 (93)
T 2cjj_A 6 GSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILV 57 (93)
T ss_dssp --CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 3468999999999999999997 468999999999999999999998864
No 56
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=98.65 E-value=1.1e-08 Score=91.53 Aligned_cols=49 Identities=22% Similarity=0.524 Sum_probs=44.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCC----CCcccccc-CCCCCHHHHHHHHHHhhhHH
Q psy10643 60 KKTEWSREEDEKLLHLAKLMP----TQWRTIAP-IIGRTAAQCLERYEFLLDQA 108 (769)
Q Consensus 60 kkg~WT~EEDe~Ll~lvk~~G----~~W~~IA~-l~GRT~~QCreRw~~lL~p~ 108 (769)
.+++||.+||.+|..++..|| .+|..||. ++|||..+|++||++++...
T Consensus 7 ~~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vpGRT~~q~k~ry~~l~~dv 60 (93)
T 2cjj_A 7 SGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDI 60 (93)
T ss_dssp -CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 367999999999999999996 57999999 99999999999999988764
No 57
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=3.1e-08 Score=81.82 Aligned_cols=47 Identities=26% Similarity=0.289 Sum_probs=43.8
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccC
Q psy10643 9 RWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLD 56 (769)
Q Consensus 9 kG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~ 56 (769)
.+.||++|++++..++..|| .+|..||.+||+||..||..+|+.+..
T Consensus 12 ~~~WT~eE~~~F~~~~~~~g-k~w~~Ia~~l~~rt~~~~v~~Yy~~Kk 58 (61)
T 2eqr_A 12 MNVWTDHEKEIFKDKFIQHP-KNFGLIASYLERKSVPDCVLYYYLTKK 58 (61)
T ss_dssp CCSCCHHHHHHHHHHHHHST-TCHHHHHHHCTTSCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhC-CCHHHHHHHcCCCCHHHHHHHHHHhcC
Confidence 47999999999999999999 699999999999999999999987654
No 58
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=98.56 E-value=3.6e-08 Score=81.74 Aligned_cols=49 Identities=29% Similarity=0.518 Sum_probs=44.8
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCccccc---c-CCCCCHHHHHHHHHHhhhH
Q psy10643 59 IKKTEWSREEDEKLLHLAKLMPTQWRTIA---P-IIGRTAAQCLERYEFLLDQ 107 (769)
Q Consensus 59 ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA---~-l~GRT~~QCreRw~~lL~p 107 (769)
-++.+||+|||+.|++.|++||.+|..|+ + +.|||...+++||.++.+.
T Consensus 6 ~~r~~WT~EE~~~L~~gV~k~G~~W~~I~~~y~f~~~RT~VdLKdk~r~L~k~ 58 (62)
T 1x58_A 6 SGRKDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDLAHKYHRLISG 58 (62)
T ss_dssp CCSSSCCHHHHHHHHHHHHHHCSCHHHHHHHSCCCTTCCHHHHHHHHHHHHTC
T ss_pred CCCCCCCHHHHHHHHHHHHHHhHhHHHHHHhCCCccCcccchHHHHHHHHHhc
Confidence 36789999999999999999999999999 5 5799999999999998753
No 59
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=98.37 E-value=1.8e-07 Score=77.60 Aligned_cols=48 Identities=15% Similarity=0.207 Sum_probs=43.3
Q ss_pred ccCCCCHHHHHHHHHHHHHhCCCchhHHH---HHhhhcChhhhhhhhccccC
Q psy10643 8 KRWVIFVFQDEILKAAVMKYGKNQWSRIA---SLLHRKSAKQCKARWFEWLD 56 (769)
Q Consensus 8 KkG~WT~EEDe~L~~~V~kyG~~~W~~IA---~~Lp~Rs~~QCr~RW~~~L~ 56 (769)
.+++||.|||+.|++.|.+||. +|..|+ .++++||...+++||++...
T Consensus 7 ~r~~WT~EE~~~L~~gV~k~G~-~W~~I~~~y~f~~~RT~VdLKdk~r~L~k 57 (62)
T 1x58_A 7 GRKDFTKEEVNYLFHGVKTMGN-HWNSILWSFPFQKGRRAVDLAHKYHRLIS 57 (62)
T ss_dssp CSSSCCHHHHHHHHHHHHHHCS-CHHHHHHHSCCCTTCCHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHhH-hHHHHHHhCCCccCcccchHHHHHHHHHh
Confidence 5689999999999999999996 999999 46779999999999988543
No 60
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.32 E-value=3.6e-07 Score=75.42 Aligned_cols=46 Identities=17% Similarity=0.289 Sum_probs=42.4
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCcccccc-CCCCCHHHHHHHHHHhh
Q psy10643 60 KKTEWSREEDEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLERYEFLL 105 (769)
Q Consensus 60 kkg~WT~EEDe~Ll~lvk~~G~~W~~IA~-l~GRT~~QCreRw~~lL 105 (769)
...+||++|+.++++++..||.+|..||. ++|||..||..+|+...
T Consensus 11 ~~~~WT~eE~~~F~~~~~~~gk~w~~Ia~~l~~rt~~~~v~~Yy~~K 57 (61)
T 2eqr_A 11 FMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYLTK 57 (61)
T ss_dssp CCCSCCHHHHHHHHHHHHHSTTCHHHHHHHCTTSCHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHHHHhc
Confidence 45789999999999999999999999999 99999999999997643
No 61
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=98.28 E-value=5.1e-07 Score=77.20 Aligned_cols=49 Identities=16% Similarity=0.139 Sum_probs=43.3
Q ss_pred cccCCCCHHHHHHHHHHHHHhC---CCchhHHHHHhhhcChhhhhhhhccccC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYG---KNQWSRIASLLHRKSAKQCKARWFEWLD 56 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG---~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~ 56 (769)
.+.+.||.+||++|..++.+|+ .+.|..||..| +||..||+.||....+
T Consensus 6 ~~~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l-gRt~~eV~~~y~~L~~ 57 (72)
T 2cqq_A 6 SGAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL-GRSVTDVTTKAKQLKD 57 (72)
T ss_dssp CCCCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH-TSCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh-CCCHHHHHHHHHHHHH
Confidence 4568999999999999999997 35799999998 7999999999987543
No 62
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=98.21 E-value=8.7e-07 Score=90.29 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=44.7
Q ss_pred ccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccC
Q psy10643 8 KRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLD 56 (769)
Q Consensus 8 KkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~ 56 (769)
..++||.+|+++++.++.+|| ++|..||..|++||..||+.+|++|..
T Consensus 132 ~s~~WTeEE~~lFleAl~kYG-KDW~~IAk~VgTKT~~QcKnfY~~~kK 179 (235)
T 2iw5_B 132 CNARWTTEEQLLAVQAIRKYG-RDFQAISDVIGNKSVVQVKNFFVNYRR 179 (235)
T ss_dssp CCSSCCHHHHHHHHHHHHHHS-SCHHHHHHHHSSCCHHHHHHHHHHTTT
T ss_pred cCCCCCHHHHHHHHHHHHHHC-cCHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 357999999999999999999 699999999999999999999998764
No 63
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=98.16 E-value=1.8e-06 Score=74.03 Aligned_cols=50 Identities=18% Similarity=0.225 Sum_probs=44.9
Q ss_pred cccCCCCHHHHHHHHHHHHHhCC---CchhHHHHHhhhcChhhhhhhhccccC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGK---NQWSRIASLLHRKSAKQCKARWFEWLD 56 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~---~~W~~IA~~Lp~Rs~~QCr~RW~~~L~ 56 (769)
.....||.+|+++|..++..|+. ++|..||..||+||..+|+.||...+.
T Consensus 6 ~~~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~gKT~eE~~~hY~~l~~ 58 (73)
T 1wgx_A 6 SGDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENPR 58 (73)
T ss_dssp CSSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSSS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 45678999999999999999975 579999999999999999999988654
No 64
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=98.14 E-value=9.9e-07 Score=75.39 Aligned_cols=50 Identities=26% Similarity=0.454 Sum_probs=44.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCC----CCccccccCCCCCHHHHHHHHHHhhhH
Q psy10643 58 SIKKTEWSREEDEKLLHLAKLMP----TQWRTIAPIIGRTAAQCLERYEFLLDQ 107 (769)
Q Consensus 58 ~ikkg~WT~EEDe~Ll~lvk~~G----~~W~~IA~l~GRT~~QCreRw~~lL~p 107 (769)
+...+.||.+||.+|..++..|+ ..|..||.++|||..+|+.||..+.+.
T Consensus 5 ~~~~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~lgRt~~eV~~~y~~L~~d 58 (72)
T 2cqq_A 5 SSGAPEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTTKAKQLKDS 58 (72)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHTSCHHHHHHHHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 45578999999999999999997 479999994499999999999998754
No 65
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=98.08 E-value=9.8e-07 Score=98.94 Aligned_cols=45 Identities=13% Similarity=0.219 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHHHHHHhCCCCcccccc-CCCCCHHHHHHHHHHhhh
Q psy10643 62 TEWSREEDEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLERYEFLLD 106 (769)
Q Consensus 62 g~WT~EEDe~Ll~lvk~~G~~W~~IA~-l~GRT~~QCreRw~~lL~ 106 (769)
..||.+|-.++++.+.+||.+|..||. +..||..||+..|+++-.
T Consensus 381 ~~WT~eE~~~f~~al~~yGkdw~~IA~~VgTKT~~Qvk~fy~~~kk 426 (482)
T 2xag_B 381 ARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRR 426 (482)
T ss_dssp SCCCHHHHHHHHHHHHHHTTCHHHHHHHHSSCCHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHCcCHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 479999999999999999999999999 788999999999987543
No 66
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=98.05 E-value=3.8e-06 Score=85.64 Aligned_cols=76 Identities=12% Similarity=0.064 Sum_probs=56.7
Q ss_pred chhHHHHHhhhcChhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCCCcccccc-CCCCCHHHHHHHHHHhhhH
Q psy10643 31 QWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLERYEFLLDQ 107 (769)
Q Consensus 31 ~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~-l~GRT~~QCreRw~~lL~p 107 (769)
+|..+-+.|-......+ .++...-...-...+||.+|+..+++++..||.+|..||. +++||..||+++|+++.+.
T Consensus 104 ~~kQ~~~~L~~~~~~~I-e~~R~pe~~~k~s~~WTeEE~~lFleAl~kYGKDW~~IAk~VgTKT~~QcKnfY~~~kKR 180 (235)
T 2iw5_B 104 NIKQTNSALKEKLDGGI-EPYRLPEVIQKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRR 180 (235)
T ss_dssp HHHHHHHHHHHHSTTTT-GGGCCCCCCCCCCSSCCHHHHHHHHHHHHHHSSCHHHHHHHHSSCCHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHhhc-ccccCCCCCCccCCCCCHHHHHHHHHHHHHHCcCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 57777666654443222 2333311112345789999999999999999999999999 8999999999999988764
No 67
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=98.04 E-value=2.9e-06 Score=75.81 Aligned_cols=65 Identities=15% Similarity=0.314 Sum_probs=57.7
Q ss_pred hhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHHhCCCCcccccc-C-----CCCCHHHHHHHHHHhhhHHhhhc
Q psy10643 44 AKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAP-I-----IGRTAAQCLERYEFLLDQAQKKE 112 (769)
Q Consensus 44 ~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~-l-----~GRT~~QCreRw~~lL~p~ikk~ 112 (769)
+.-|.++|.++|.+ .+||.||+..|++|++.|+.+|..|+. + ++||..++++||..+.+..+...
T Consensus 17 ~~yt~eeY~~~L~~----~~WTkEETd~Lf~L~~~fdlRW~vI~DRy~~~~~~~Rt~EdLK~RyY~v~~~l~~~r 87 (93)
T 3hm5_A 17 PVYSEQEYQLYLHD----DAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANVR 87 (93)
T ss_dssp CCCCHHHHHHHTCB----TTBCHHHHHHHHHHHHHTTTCHHHHHHHSCTTTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHcCC----CCCCHHHHHHHHHHHHHhCCCeeeehhhhccCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 35678999999976 799999999999999999999999999 6 48999999999999888766544
No 68
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=97.87 E-value=7.3e-06 Score=67.43 Aligned_cols=48 Identities=21% Similarity=0.297 Sum_probs=43.3
Q ss_pred cCCCCHHHHHHHHHHHHHh--------CCCchhHHHH-HhhhcChhhhhhhhccccC
Q psy10643 9 RWVIFVFQDEILKAAVMKY--------GKNQWSRIAS-LLHRKSAKQCKARWFEWLD 56 (769)
Q Consensus 9 kG~WT~EEDe~L~~~V~ky--------G~~~W~~IA~-~Lp~Rs~~QCr~RW~~~L~ 56 (769)
+.+||.|||.+|...|..| |..-|..++. .++++|-.+|++||.++|.
T Consensus 2 R~~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~~~~~~HtwqSwRdRy~k~l~ 58 (59)
T 1fex_A 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHHhHCCCCCHHHHHHHHHHHcc
Confidence 3579999999999999999 5457999999 8999999999999998874
No 69
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=97.63 E-value=2.9e-05 Score=66.54 Aligned_cols=46 Identities=24% Similarity=0.467 Sum_probs=41.2
Q ss_pred CCCCCHHHHHHHHHHHHhCCC----Ccccccc-CCCCCHHHHHHHHHHhhh
Q psy10643 61 KTEWSREEDEKLLHLAKLMPT----QWRTIAP-IIGRTAAQCLERYEFLLD 106 (769)
Q Consensus 61 kg~WT~EEDe~Ll~lvk~~G~----~W~~IA~-l~GRT~~QCreRw~~lL~ 106 (769)
...||.+|+.+|..++..|+. .|..||. ++|||..+|+.||..+++
T Consensus 8 ~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~gKT~eE~~~hY~~l~~ 58 (73)
T 1wgx_A 8 DKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENPR 58 (73)
T ss_dssp SSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSSS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 457999999999999988873 6999999 899999999999998854
No 70
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=97.59 E-value=2.8e-05 Score=63.93 Aligned_cols=46 Identities=15% Similarity=0.295 Sum_probs=41.2
Q ss_pred CCCCCHHHHHHHHHHHHhC--------CC-Ccccccc--CCCCCHHHHHHHHHHhhh
Q psy10643 61 KTEWSREEDEKLLHLAKLM--------PT-QWRTIAP--IIGRTAAQCLERYEFLLD 106 (769)
Q Consensus 61 kg~WT~EEDe~Ll~lvk~~--------G~-~W~~IA~--l~GRT~~QCreRw~~lL~ 106 (769)
+.+||.|||..|+.+|..+ |+ -|..++. ++++|..+||+||.+.|+
T Consensus 2 R~~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~~~~~~HtwqSwRdRy~k~l~ 58 (59)
T 1fex_A 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHHhHCCCCCHHHHHHHHHHHcc
Confidence 5789999999999999988 43 5999998 799999999999999874
No 71
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=97.50 E-value=1.9e-05 Score=67.48 Aligned_cols=44 Identities=11% Similarity=0.234 Sum_probs=39.3
Q ss_pred cCCCCHHHHHHHHHHHHHhCC---CchhHHHHHhhhcChhhhhhhhc
Q psy10643 9 RWVIFVFQDEILKAAVMKYGK---NQWSRIASLLHRKSAKQCKARWF 52 (769)
Q Consensus 9 kG~WT~EEDe~L~~~V~kyG~---~~W~~IA~~Lp~Rs~~QCr~RW~ 52 (769)
.+.||.+|+++|..++..|+. ..|.+||..|||||..+|+.+|.
T Consensus 20 s~~WT~eE~K~FE~ALa~yp~~tpdRWekIA~~VpGKT~eEVk~hY~ 66 (74)
T 4eef_G 20 GRPWKFSENIAFEIALSFTNKDTPDRWKKVAQYVKGRTPEEVKKHYE 66 (74)
T ss_dssp --CCCTTHHHHHHHHTSSSCSSCCSSSTTTGGGSCSSCHHHHHGGGC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHcCCCCHHHHHHHHH
Confidence 468999999999999999975 38999999999999999999985
No 72
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.42 E-value=0.00011 Score=60.96 Aligned_cols=49 Identities=18% Similarity=0.217 Sum_probs=43.7
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHH-HhhhcChhhhhhhhccccC
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIAS-LLHRKSAKQCKARWFEWLD 56 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~-~Lp~Rs~~QCr~RW~~~L~ 56 (769)
++...||++|-+++..++.+||. +|..|+. .|++||..||...|+.|-.
T Consensus 7 ~~~~~WT~eE~~~Fe~~l~~yGK-df~~I~~~~v~~Kt~~~~v~fYY~wKk 56 (63)
T 2yqk_A 7 GIEKCWTEDEVKRFVKGLRQYGK-NFFRIRKELLPNKETGELITFYYYWKK 56 (63)
T ss_dssp CCCCSCCHHHHHHHHHHHHHTCS-CHHHHHHHSCTTSCHHHHHHHHHHHHC
T ss_pred cCCCCcCHHHHHHHHHHHHHhCc-cHHHHHHHHcCCCcHHHHHHHHhcccC
Confidence 45679999999999999999995 9999999 5999999999998877643
No 73
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=97.39 E-value=0.00012 Score=78.22 Aligned_cols=98 Identities=18% Similarity=0.153 Sum_probs=77.8
Q ss_pred CCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhh----ccc--c----------------------------
Q psy10643 10 WVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARW----FEW--L---------------------------- 55 (769)
Q Consensus 10 G~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW----~~~--L---------------------------- 55 (769)
+.||..+...++.++.+||.++|..||..|+++|...++..+ .++ |
T Consensus 111 ~~W~rrdf~~Fi~a~~kyGr~~~~~IA~ev~~Kt~eEV~~Y~~vFw~ry~ei~d~ek~~~~IE~gE~ki~r~~~~~~~l~ 190 (304)
T 1ofc_X 111 TAWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKTPEEVIEYNAVFWERCTELQDIERIMGQIERGEGKIQRRLSIKKALD 190 (304)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTCHHHHTTSSTTCCHHHHHHHHHHHHHHGGGCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCHHHHHHHHHHhcCCCHHHHHHHHHHHHHhHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999999999999999988764311 111 0
Q ss_pred -------C---------CCCCCCCCCHHHHHHHHHHHHhCC----CCcccccc-------------CCCCCHHHHHHHHH
Q psy10643 56 -------D---------PSIKKTEWSREEDEKLLHLAKLMP----TQWRTIAP-------------IIGRTAAQCLERYE 102 (769)
Q Consensus 56 -------~---------p~ikkg~WT~EEDe~Ll~lvk~~G----~~W~~IA~-------------l~GRT~~QCreRw~ 102 (769)
+ +..+...||.+||..||-.+.+|| ++|..|.. +..||+.++..|..
T Consensus 191 ~Ki~~~~~P~~~L~i~y~~~k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwf~kSRTp~el~rRc~ 270 (304)
T 1ofc_X 191 QKMSRYRAPFHQLRLQYGNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCN 270 (304)
T ss_dssp HHHHTCSSHHHHCCCCCTTCCCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHH
T ss_pred HHHHHhcCcHHHhccccCCCCCCccCHHHHHHHHHHHHHhcCCCcchHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHHH
Confidence 0 122346799999999999888887 47999962 23699999999999
Q ss_pred HhhhH
Q psy10643 103 FLLDQ 107 (769)
Q Consensus 103 ~lL~p 107 (769)
.++.-
T Consensus 271 tLi~~ 275 (304)
T 1ofc_X 271 TLITL 275 (304)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 74
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=97.22 E-value=0.00021 Score=80.33 Aligned_cols=47 Identities=19% Similarity=0.222 Sum_probs=43.2
Q ss_pred ccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhcccc
Q psy10643 8 KRWVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWL 55 (769)
Q Consensus 8 KkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L 55 (769)
...+||.+|-++++.++.+|| .+|..||..|++||..||+.+|+++-
T Consensus 379 ~~~~WT~eE~~~f~~al~~yG-kdw~~IA~~VgTKT~~Qvk~fy~~~k 425 (482)
T 2xag_B 379 CNARWTTEEQLLAVQAIRKYG-RDFQAISDVIGNKSVVQVKNFFVNYR 425 (482)
T ss_dssp CCSCCCHHHHHHHHHHHHHHT-TCHHHHHHHHSSCCHHHHHHHHHHTT
T ss_pred cCCCCCHHHHHHHHHHHHHHC-cCHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 357999999999999999999 59999999999999999999997653
No 75
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=97.08 E-value=0.00036 Score=62.39 Aligned_cols=45 Identities=20% Similarity=0.277 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhcccc
Q psy10643 10 WVIFVFQDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWL 55 (769)
Q Consensus 10 G~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L 55 (769)
..||++|.+++..++..|| .+|..||+.|++||..+|-..|+.+-
T Consensus 44 ~~WT~eE~~~F~~~~~~~g-K~F~~Ia~~l~~Kt~~~cV~~YY~~K 88 (94)
T 4a69_C 44 NMWSEQEKETFREKFMQHP-KNFGLIASFLERKTVAECVLYYYLTK 88 (94)
T ss_dssp CCCCHHHHHHHHHHHHHST-TCHHHHHHTCTTCCHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHcC-CCHHHHHHHcCCCCHHHHHHHHhccc
Confidence 6799999999999999999 59999999999999999999887654
No 76
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=97.04 E-value=0.00042 Score=58.71 Aligned_cols=46 Identities=22% Similarity=0.325 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHHHHHHHhCCCchhHHHH-HhhhcChhhhhhhhccccC
Q psy10643 10 WVIFVFQDEILKAAVMKYGKNQWSRIAS-LLHRKSAKQCKARWFEWLD 56 (769)
Q Consensus 10 G~WT~EEDe~L~~~V~kyG~~~W~~IA~-~Lp~Rs~~QCr~RW~~~L~ 56 (769)
..||++|-+++..++.+||. +|..|+. .|++||..+|...|+.|-.
T Consensus 9 ~~WT~eE~~~Fe~~l~~yGK-df~~I~~~~v~~Kt~~~~v~fYY~wKk 55 (70)
T 2crg_A 9 EEWSASEACLFEEALEKYGK-DFNDIRQDFLPWKSLTSIIEYYYMWKT 55 (70)
T ss_dssp CCCCHHHHHHHHHHHHHTCS-CHHHHHHTTCSSSCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhCc-cHHHHHHHHcCCCCHHHHHHHHHhhcC
Confidence 57999999999999999995 9999999 6999999999998876543
No 77
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=96.99 E-value=0.00048 Score=61.61 Aligned_cols=48 Identities=13% Similarity=0.158 Sum_probs=44.0
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHh-----hhcChhhhhhhhcccc
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLL-----HRKSAKQCKARWFEWL 55 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~L-----p~Rs~~QCr~RW~~~L 55 (769)
++.+.||.||+..|..++.+|+. .|..|+..+ ++||..+.+.||+.+.
T Consensus 28 L~~~~WTkEETd~Lf~L~~~fdl-RW~vI~DRy~~~~~~~Rt~EdLK~RyY~v~ 80 (93)
T 3hm5_A 28 LHDDAWTKAETDHLFDLSRRFDL-RFVVIHDRYDHQQFKKRSVEDLKERYYHIC 80 (93)
T ss_dssp TCBTTBCHHHHHHHHHHHHHTTT-CHHHHHHHSCTTTSCCCCHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHhCC-CeeeehhhhccCCCCCCCHHHHHHHHHHHH
Confidence 56789999999999999999995 999999999 4799999999998754
No 78
>4eef_G F-HB80.4, designed hemagglutinin binding protein; immunoglobulin, fusion of virus membrane with membrane, membrane fusion, sialic acid, virion; HET: NAG BMA; 2.70A {Artificial gene}
Probab=96.89 E-value=0.00035 Score=59.71 Aligned_cols=42 Identities=21% Similarity=0.471 Sum_probs=37.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCC----Ccccccc-CCCCCHHHHHHHHH
Q psy10643 61 KTEWSREEDEKLLHLAKLMPT----QWRTIAP-IIGRTAAQCLERYE 102 (769)
Q Consensus 61 kg~WT~EEDe~Ll~lvk~~G~----~W~~IA~-l~GRT~~QCreRw~ 102 (769)
.+.||.+|+..|-.+...|+. .|..||. ++|||..+|+.+|.
T Consensus 20 s~~WT~eE~K~FE~ALa~yp~~tpdRWekIA~~VpGKT~eEVk~hY~ 66 (74)
T 4eef_G 20 GRPWKFSENIAFEIALSFTNKDTPDRWKKVAQYVKGRTPEEVKKHYE 66 (74)
T ss_dssp --CCCTTHHHHHHHHTSSSCSSCCSSSTTTGGGSCSSCHHHHHGGGC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHcCCCCHHHHHHHHH
Confidence 467999999999999998874 7999999 89999999999985
No 79
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.66 E-value=0.0017 Score=53.86 Aligned_cols=48 Identities=10% Similarity=0.237 Sum_probs=42.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCCCcccccc--CCCCCHHHHHHHHHH
Q psy10643 56 DPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAP--IIGRTAAQCLERYEF 103 (769)
Q Consensus 56 ~p~ikkg~WT~EEDe~Ll~lvk~~G~~W~~IA~--l~GRT~~QCreRw~~ 103 (769)
.|.+....||++|-.+..+.+..||.+|..|+. +++||..+|..-|..
T Consensus 4 ~p~~~~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~ 53 (63)
T 2yqk_A 4 GSSGIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYY 53 (63)
T ss_dssp CCCCCCCSCCHHHHHHHHHHHHHTCSCHHHHHHHSCTTSCHHHHHHHHHH
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHhCccHHHHHHHHcCCCcHHHHHHHHhc
Confidence 366778899999999999999999999999997 578999999988864
No 80
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=95.68 E-value=0.00029 Score=59.26 Aligned_cols=45 Identities=20% Similarity=0.400 Sum_probs=40.4
Q ss_pred CCCCHHHHHHHHHHHHhCCC---CccccccCCCCCHHHHHHHHHHhhh
Q psy10643 62 TEWSREEDEKLLHLAKLMPT---QWRTIAPIIGRTAAQCLERYEFLLD 106 (769)
Q Consensus 62 g~WT~EEDe~Ll~lvk~~G~---~W~~IA~l~GRT~~QCreRw~~lL~ 106 (769)
--||.|||..||..+++.|. .|..||...|||+.|+.+||+.++.
T Consensus 15 vlWTReeDR~IL~~cq~~G~s~~tfa~iA~~Lnks~~QV~~RF~~Lm~ 62 (70)
T 2lr8_A 15 ILWTRNDDRVILLECQKRGPSSKTFAYLAAKLDKNPNQVSERFQQLMK 62 (70)
Confidence 35999999999999999886 8999999339999999999998875
No 81
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=96.45 E-value=0.0016 Score=57.73 Aligned_cols=49 Identities=18% Similarity=0.376 Sum_probs=42.7
Q ss_pred CCCCHHHHHHHHHHHHhCCC---Ccccccc-CCCCCHHHHHHHHHHhhhHHhh
Q psy10643 62 TEWSREEDEKLLHLAKLMPT---QWRTIAP-IIGRTAAQCLERYEFLLDQAQK 110 (769)
Q Consensus 62 g~WT~EEDe~Ll~lvk~~G~---~W~~IA~-l~GRT~~QCreRw~~lL~p~ik 110 (769)
-.||.++|..||...++.|. .|..||. +-+|+..|+++||+.+++--.+
T Consensus 34 vlWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L~Nks~nqV~~RFq~Lm~Lf~~ 86 (95)
T 1ug2_A 34 VLWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQLFHT 86 (95)
T ss_dssp SSSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEeccccCHHHHHHHHhcCCChhHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 45999999999999999885 8999999 6789999999999998865433
No 82
>2ebi_A DNA binding protein GT-1; DNA-binding domain, phosphorylation; HET: DNA; NMR {Arabidopsis thaliana} PDB: 2jmw_A*
Probab=96.34 E-value=0.0017 Score=56.60 Aligned_cols=47 Identities=15% Similarity=0.264 Sum_probs=39.5
Q ss_pred ccCCCCHHHHHHHHHHHHHhCC---------CchhHHHHHhh----hcChhhhhhhhccc
Q psy10643 8 KRWVIFVFQDEILKAAVMKYGK---------NQWSRIASLLH----RKSAKQCKARWFEW 54 (769)
Q Consensus 8 KkG~WT~EEDe~L~~~V~kyG~---------~~W~~IA~~Lp----~Rs~~QCr~RW~~~ 54 (769)
+...||.+|-..|+.+...+.. .-|..||..|. .||+.||+.+|.+.
T Consensus 3 R~~~Wt~~Et~~Li~~~~e~~~~f~~~~~~~~~W~~Ia~~m~~~G~~rs~~qC~~K~~nL 62 (86)
T 2ebi_A 3 RAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPDMCTDKWRNL 62 (86)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHccccchHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 4678999999999999975321 26999999986 69999999999874
No 83
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=96.10 E-value=0.0037 Score=55.84 Aligned_cols=43 Identities=26% Similarity=0.433 Sum_probs=39.8
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCcccccc-CCCCCHHHHHHHHHH
Q psy10643 61 KTEWSREEDEKLLHLAKLMPTQWRTIAP-IIGRTAAQCLERYEF 103 (769)
Q Consensus 61 kg~WT~EEDe~Ll~lvk~~G~~W~~IA~-l~GRT~~QCreRw~~ 103 (769)
...||++|-.+..+....||.+|..|+. +++||..+|...|..
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK~F~~Ia~~l~~Kt~~~cV~~YY~ 86 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYL 86 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTTCHHHHHHTCTTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHHhc
Confidence 4689999999999999999999999999 899999999998864
No 84
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=95.51 E-value=0.01 Score=52.58 Aligned_cols=43 Identities=19% Similarity=0.233 Sum_probs=40.0
Q ss_pred CCCHHHHHHHHHHHHHhCC--CchhHHHHHhhhcChhhhhhhhcc
Q psy10643 11 VIFVFQDEILKAAVMKYGK--NQWSRIASLLHRKSAKQCKARWFE 53 (769)
Q Consensus 11 ~WT~EEDe~L~~~V~kyG~--~~W~~IA~~Lp~Rs~~QCr~RW~~ 53 (769)
.||.+||..++...++-|. .-|..||+.|++|++.|+..||+.
T Consensus 35 lWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L~Nks~nqV~~RFq~ 79 (95)
T 1ug2_A 35 LWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRE 79 (95)
T ss_dssp SSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHH
T ss_pred EeccccCHHHHHHHHhcCCChhHHHHHHHHHccCCHHHHHHHHHH
Confidence 5999999999999999875 379999999999999999999987
No 85
>2ebi_A DNA binding protein GT-1; DNA-binding domain, phosphorylation; HET: DNA; NMR {Arabidopsis thaliana} PDB: 2jmw_A*
Probab=95.47 E-value=0.004 Score=54.22 Aligned_cols=50 Identities=22% Similarity=0.576 Sum_probs=40.9
Q ss_pred CCCCCHHHHHHHHHHHHhCC----------CCcccccc-C----CCCCHHHHHHHHHHhhhHHhh
Q psy10643 61 KTEWSREEDEKLLHLAKLMP----------TQWRTIAP-I----IGRTAAQCLERYEFLLDQAQK 110 (769)
Q Consensus 61 kg~WT~EEDe~Ll~lvk~~G----------~~W~~IA~-l----~GRT~~QCreRw~~lL~p~ik 110 (769)
...||.+|-..|+.++..+. ..|..||. | ..||+.||+.+|.++...-.+
T Consensus 4 ~~~Wt~~Et~~Li~~~~e~~~~f~~~~~~~~~W~~Ia~~m~~~G~~rs~~qC~~K~~nL~k~Yk~ 68 (86)
T 2ebi_A 4 AETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPDMCTDKWRNLLKEFKK 68 (86)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHccccchHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 56799999999999986421 26999999 5 359999999999999876443
No 86
>4b4c_A Chromodomain-helicase-DNA-binding protein 1; chromatin-remodeling, histone acetylation COMP chromatin regulation, transcription; 1.62A {Homo sapiens}
Probab=95.39 E-value=0.021 Score=57.11 Aligned_cols=97 Identities=20% Similarity=0.183 Sum_probs=68.9
Q ss_pred CCCCHHHHHHHHHHHHHhC--CCchhHHHHH--hhhcChhhhhhhhc-------cccC----------------------
Q psy10643 10 WVIFVFQDEILKAAVMKYG--KNQWSRIASL--LHRKSAKQCKARWF-------EWLD---------------------- 56 (769)
Q Consensus 10 G~WT~EEDe~L~~~V~kyG--~~~W~~IA~~--Lp~Rs~~QCr~RW~-------~~L~---------------------- 56 (769)
..||..|-..|+.++.+|| ...|..|+.. |.+||...+..-+. ..++
T Consensus 8 ~~~t~~E~r~fira~~kfG~~~~r~~~I~~da~L~~Ks~~~v~~y~~~f~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (211)
T 4b4c_A 8 KGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVKGPTFR 87 (211)
T ss_dssp CCSCHHHHHHHHHHHTTCSSGGGCHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHC-----------------CCEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCchhHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhccccchhhh
Confidence 4699999999999999999 4689999864 55666554332100 0000
Q ss_pred ------------------------------------------CCCCCCCCCHHHHHHHHHHHHhCC-CCcccccc---C-
Q psy10643 57 ------------------------------------------PSIKKTEWSREEDEKLLHLAKLMP-TQWRTIAP---I- 89 (769)
Q Consensus 57 ------------------------------------------p~ikkg~WT~EEDe~Ll~lvk~~G-~~W~~IA~---l- 89 (769)
+......||.+||..||-.+.+|| ++|..|-. +
T Consensus 88 ~~~v~~nA~~il~R~~~l~~L~~~v~~~~~~~~~~~i~~~~~~~~~~~~W~~~~D~~LL~Gi~k~G~g~w~~Ir~D~~l~ 167 (211)
T 4b4c_A 88 ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLS 167 (211)
T ss_dssp ETTEEEEHHHHHHHHHHHHHHHHHSCSSHHHHHTCCCCSCCCCCCSSSCCCHHHHHHHHHHHHHHCTTCHHHHHHCSSSS
T ss_pred hcccchhHHHHHHhHHHHHHHHHHHHhchhhHHHcCcCCCCCCCCCCCCccHHHHHHHHHHHHHHCcCcHHHHHhChhcC
Confidence 001123499999999999999999 89988764 1
Q ss_pred -C----------CCCHHHHHHHHHHhhh
Q psy10643 90 -I----------GRTAAQCLERYEFLLD 106 (769)
Q Consensus 90 -~----------GRT~~QCreRw~~lL~ 106 (769)
. .+++..+..|..++|.
T Consensus 168 ~~~k~~~~~~~k~p~a~~L~rR~~~Ll~ 195 (211)
T 4b4c_A 168 LTHKILPDDPDKKPQAKQLQTRADYLIK 195 (211)
T ss_dssp CTTTSSCSSTTSSCCHHHHHHHHHHHHH
T ss_pred ccccccccccccCCChHHHHHHHHHHHH
Confidence 1 2567789999887776
No 87
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=95.16 E-value=0.015 Score=49.08 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=39.3
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCcccccc--CCCCCHHHHHHHHHH
Q psy10643 61 KTEWSREEDEKLLHLAKLMPTQWRTIAP--IIGRTAAQCLERYEF 103 (769)
Q Consensus 61 kg~WT~EEDe~Ll~lvk~~G~~W~~IA~--l~GRT~~QCreRw~~ 103 (769)
...||++|-.+..+.+..||.+|..|+. +++||..+|..-|..
T Consensus 8 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v~~Kt~~~~v~fYY~ 52 (70)
T 2crg_A 8 MEEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYM 52 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHTCSCHHHHHHTTCSSSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCccHHHHHHHHcCCCCHHHHHHHHHh
Confidence 4689999999999999999999999998 578999999998863
No 88
>4iej_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin regulator, repressor, structural joint center for structural genomics; HET: DNA; 1.45A {Homo sapiens} PDB: 3hm5_A*
Probab=95.08 E-value=0.021 Score=50.94 Aligned_cols=52 Identities=17% Similarity=0.350 Sum_probs=46.1
Q ss_pred CCCCHHHHHHHHHHHHhCCCCcccccc-CC-----CCCHHHHHHHHHHhhhHHhhhcc
Q psy10643 62 TEWSREEDEKLLHLAKLMPTQWRTIAP-II-----GRTAAQCLERYEFLLDQAQKKEE 113 (769)
Q Consensus 62 g~WT~EEDe~Ll~lvk~~G~~W~~IA~-l~-----GRT~~QCreRw~~lL~p~ikk~~ 113 (769)
..||.+|...|++|++.|.-.|..|+. .. +||-.++++||..+...-+....
T Consensus 31 ~~WT~eETd~LfdLc~~fdlRw~vI~DRy~~~~~~~RtvEdLK~RYY~V~~~l~~~r~ 88 (93)
T 4iej_A 31 DAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANVRA 88 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTTCHHHHHHHCCTTTSCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeeccccCCCCCCCHHHHHHHHHHHHHHHHHhhC
Confidence 689999999999999999999999998 43 69999999999999887766543
No 89
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=93.90 E-value=0.0046 Score=52.09 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHHHHHHhCC--CchhHHHHHhhhcChhhhhhhhcccc
Q psy10643 11 VIFVFQDEILKAAVMKYGK--NQWSRIASLLHRKSAKQCKARWFEWL 55 (769)
Q Consensus 11 ~WT~EEDe~L~~~V~kyG~--~~W~~IA~~Lp~Rs~~QCr~RW~~~L 55 (769)
.||.|||..++..+.+-|. .-|..||..| +||+.|+..||...+
T Consensus 16 lWTReeDR~IL~~cq~~G~s~~tfa~iA~~L-nks~~QV~~RF~~Lm 61 (70)
T 2lr8_A 16 LWTRNDDRVILLECQKRGPSSKTFAYLAAKL-DKNPNQVSERFQQLM 61 (70)
Confidence 5999999999999999886 3799999999 799999999998754
No 90
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=94.59 E-value=0.052 Score=59.35 Aligned_cols=100 Identities=23% Similarity=0.193 Sum_probs=77.0
Q ss_pred CCCCHHHHHHHHHHHHHhCCCchhHHHHHhh-hcChhhhhh-------hhccccC-------------------------
Q psy10643 10 WVIFVFQDEILKAAVMKYGKNQWSRIASLLH-RKSAKQCKA-------RWFEWLD------------------------- 56 (769)
Q Consensus 10 G~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp-~Rs~~QCr~-------RW~~~L~------------------------- 56 (769)
+.||.-+=..++.++.+||-++-..||..|. ++|...++. ||..+-+
T Consensus 124 ~~WnrrDF~~FI~a~~kyGR~d~~~IA~ev~~~Kt~eEV~~Y~~vFw~Ry~Ei~d~erii~~IEkgE~ki~r~~~~~~~L 203 (374)
T 2y9y_A 124 TNWNKLEFRKFITVSGKYGRNSIQAIARELAPGKTLEEVRAYAKAFWSNIERIEDYEKYLKIIENEEEKIKRVKMQQEAL 203 (374)
T ss_dssp CCSCHHHHHHHHHHHHHHCTTCHHHHHSSCCCSSSHHHHHHHHHHHHHTCSSCSCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCHhHHHHHHHHHccCCCHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999999998 898877652 2211100
Q ss_pred -------------------CC-CCCCCCCHHHHHHHHHHHHhCC----CCcccccc-------------CCCCCHHHHHH
Q psy10643 57 -------------------PS-IKKTEWSREEDEKLLHLAKLMP----TQWRTIAP-------------IIGRTAAQCLE 99 (769)
Q Consensus 57 -------------------p~-ikkg~WT~EEDe~Ll~lvk~~G----~~W~~IA~-------------l~GRT~~QCre 99 (769)
++ -+...||.+||..||-++.+|| ++|..|-. +..||+..+..
T Consensus 204 ~~Ki~~y~~P~~~L~i~y~~~~~k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwF~kSRT~~EL~r 283 (374)
T 2y9y_A 204 RRKLSEYKNPFFDLKLKHPPSSNNKRTYSEEEDRFILLMLFKYGLDRDDVYELVRDEIRDCPLFELDFYFRSRTPVELAR 283 (374)
T ss_dssp HHHHTTCSSHHHHCCCSSCCCCSSCCCSCHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHCSGGGSCHHHHTCCHHHHHH
T ss_pred HHHHHHccCCHHHceeccCCCCCCCCccCHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCcchhhhHHHhcCCHHHHHH
Confidence 01 1345699999999999888877 57999832 13599999999
Q ss_pred HHHHhhhHHh
Q psy10643 100 RYEFLLDQAQ 109 (769)
Q Consensus 100 Rw~~lL~p~i 109 (769)
|...++.-..
T Consensus 284 Rc~tLi~~Ie 293 (374)
T 2y9y_A 284 RGNTLLQCLE 293 (374)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999997543
No 91
>4iej_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin regulator, repressor, structural joint center for structural genomics; HET: DNA; 1.45A {Homo sapiens} PDB: 3hm5_A*
Probab=93.90 E-value=0.045 Score=48.86 Aligned_cols=48 Identities=13% Similarity=0.156 Sum_probs=43.3
Q ss_pred cccCCCCHHHHHHHHHHHHHhCCCchhHHHHHhh-----hcChhhhhhhhcccc
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGKNQWSRIASLLH-----RKSAKQCKARWFEWL 55 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~~~W~~IA~~Lp-----~Rs~~QCr~RW~~~L 55 (769)
++...||.||...|..++.+|.. .|--|+.... .||..+.++||+.+.
T Consensus 28 L~~~~WT~eETd~LfdLc~~fdl-Rw~vI~DRy~~~~~~~RtvEdLK~RYY~V~ 80 (93)
T 4iej_A 28 LHDDAWTKAETDHLFDLSRRFDL-RFVVIHDRYDHQQFKKRSVEDLKERYYHIC 80 (93)
T ss_dssp TCBTTBCHHHHHHHHHHHHHTTT-CHHHHHHHCCTTTSCCCCHHHHHHHHHHHH
T ss_pred hCCCCCCHHHHHHHHHHHHHcCC-CeEEEeeccccCCCCCCCHHHHHHHHHHHH
Confidence 56789999999999999999996 9999999874 699999999998854
No 92
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=88.05 E-value=0.44 Score=50.86 Aligned_cols=47 Identities=17% Similarity=0.202 Sum_probs=39.5
Q ss_pred cccCCCCHHHHHHHHHHHHHhCC---CchhHHHH------------HhhhcChhhhhhhhcc
Q psy10643 7 LKRWVIFVFQDEILKAAVMKYGK---NQWSRIAS------------LLHRKSAKQCKARWFE 53 (769)
Q Consensus 7 vKkG~WT~EEDe~L~~~V~kyG~---~~W~~IA~------------~Lp~Rs~~QCr~RW~~ 53 (769)
-++..||.+||..|+-.+.+||. ++|..|.. ++..||+.++..|-..
T Consensus 210 ~k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwf~kSRTp~el~rRc~t 271 (304)
T 1ofc_X 210 NKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNT 271 (304)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHhcCCCcchHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHHHH
Confidence 36789999999999999999999 99999973 4446888888888544
No 93
>4b4c_A Chromodomain-helicase-DNA-binding protein 1; chromatin-remodeling, histone acetylation COMP chromatin regulation, transcription; 1.62A {Homo sapiens}
Probab=87.07 E-value=1.9 Score=42.76 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=38.2
Q ss_pred CCCCCCHHHHHHHHHHHHhCC---CCcccccc---CCCCCHHHHHHHHHHhhh
Q psy10643 60 KKTEWSREEDEKLLHLAKLMP---TQWRTIAP---IIGRTAAQCLERYEFLLD 106 (769)
Q Consensus 60 kkg~WT~EEDe~Ll~lvk~~G---~~W~~IA~---l~GRT~~QCreRw~~lL~ 106 (769)
....||..|-..|+..+.+|| ..|..|+. +.++|...++.-+..++.
T Consensus 6 ~~~~~t~~E~r~fira~~kfG~~~~r~~~I~~da~L~~Ks~~~v~~y~~~f~~ 58 (211)
T 4b4c_A 6 NIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHN 58 (211)
T ss_dssp --CCSCHHHHHHHHHHHTTCSSGGGCHHHHHHHTTCTTSCHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHCCchhHHHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 456899999999999999999 47999975 789999998875555544
No 94
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=81.85 E-value=1.9 Score=36.01 Aligned_cols=46 Identities=15% Similarity=0.125 Sum_probs=38.7
Q ss_pred cCCCCHHHHHHHHHHHHHhCCC--chhHHHHHhh--hcChhhhhhhhccc
Q psy10643 9 RWVIFVFQDEILKAAVMKYGKN--QWSRIASLLH--RKSAKQCKARWFEW 54 (769)
Q Consensus 9 kG~WT~EEDe~L~~~V~kyG~~--~W~~IA~~Lp--~Rs~~QCr~RW~~~ 54 (769)
+-.||+|..+.+..+|..+|.. -|..|...|+ +.|..++..+.+.|
T Consensus 7 r~~WT~elH~~Fv~Av~~LG~~~AtPk~Il~~M~v~gLT~~~VkSHLQKY 56 (64)
T 1irz_A 7 RVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKF 56 (64)
T ss_dssp SCSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCCCcHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 4569999999999999999943 2789999986 78999998887654
No 95
>2xb0_X Chromo domain-containing protein 1; hydrolase, DNA-binding protein, transcription, chromatin REG; HET: GOL; 2.00A {Saccharomyces cerevisiae} PDB: 3ted_A
Probab=79.13 E-value=1.2 Score=46.73 Aligned_cols=27 Identities=33% Similarity=0.493 Sum_probs=25.4
Q ss_pred CCCHHHHHHHHHHHHHhCCCchhHHHH
Q psy10643 11 VIFVFQDEILKAAVMKYGKNQWSRIAS 37 (769)
Q Consensus 11 ~WT~EEDe~L~~~V~kyG~~~W~~IA~ 37 (769)
.|+.+||..|+..|.+||.++|..|..
T Consensus 170 ~W~~~dD~~LLvGIykyGyG~We~Ir~ 196 (270)
T 2xb0_X 170 NWTKEEDEKLLIGVFKYGYGSWTQIRD 196 (270)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcChHHHHHHHHHHHHHcCCcHHHHhc
Confidence 499999999999999999999999964
No 96
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=70.99 E-value=4.2 Score=44.51 Aligned_cols=44 Identities=11% Similarity=0.206 Sum_probs=35.8
Q ss_pred ccCCCCHHHHHHHHHHHHHhCC---CchhHHHHHhh------------hcChhhhhhhh
Q psy10643 8 KRWVIFVFQDEILKAAVMKYGK---NQWSRIASLLH------------RKSAKQCKARW 51 (769)
Q Consensus 8 KkG~WT~EEDe~L~~~V~kyG~---~~W~~IA~~Lp------------~Rs~~QCr~RW 51 (769)
++..||.+||..|+..+.+||. ++|..|-..+. .||+..+..|-
T Consensus 227 k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwF~kSRT~~EL~rRc 285 (374)
T 2y9y_A 227 NKRTYSEEEDRFILLMLFKYGLDRDDVYELVRDEIRDCPLFELDFYFRSRTPVELARRG 285 (374)
T ss_dssp SCCCSCHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHCSGGGSCHHHHTCCHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHH
Confidence 6789999999999999999999 89999965543 46666666664
No 97
>1irz_A ARR10-B; helix-turn-helix, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.11
Probab=66.01 E-value=6.5 Score=32.75 Aligned_cols=47 Identities=13% Similarity=0.143 Sum_probs=38.9
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCC---cccccc---CCCCCHHHHHHHHHHhhh
Q psy10643 60 KKTEWSREEDEKLLHLAKLMPTQ---WRTIAP---IIGRTAAQCLERYEFLLD 106 (769)
Q Consensus 60 kkg~WT~EEDe~Ll~lvk~~G~~---W~~IA~---l~GRT~~QCreRw~~lL~ 106 (769)
.+-.||+|.....+++|..+|.. |..|-. ++|.|..+++.+.+.|-.
T Consensus 6 ~r~~WT~elH~~Fv~Av~~LG~~~AtPk~Il~~M~v~gLT~~~VkSHLQKYR~ 58 (64)
T 1irz_A 6 PRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRV 58 (64)
T ss_dssp SSCSSCHHHHHHHHHHHHHHCTTTCCHHHHHHHHCCTTCCHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCCCcHHHHHHcCCCCCCHHHHHHHHHHHHH
Confidence 45689999999999999999954 567766 368999999999987753
No 98
>2xb0_X Chromo domain-containing protein 1; hydrolase, DNA-binding protein, transcription, chromatin REG; HET: GOL; 2.00A {Saccharomyces cerevisiae} PDB: 3ted_A
Probab=54.15 E-value=4.1 Score=42.79 Aligned_cols=26 Identities=38% Similarity=0.617 Sum_probs=24.2
Q ss_pred CCCHHHHHHHHHHHHhCC-CCcccccc
Q psy10643 63 EWSREEDEKLLHLAKLMP-TQWRTIAP 88 (769)
Q Consensus 63 ~WT~EEDe~Ll~lvk~~G-~~W~~IA~ 88 (769)
.|+.+||..||-.|.+|| ++|..|..
T Consensus 170 ~W~~~dD~~LLvGIykyGyG~We~Ir~ 196 (270)
T 2xb0_X 170 NWTKEEDEKLLIGVFKYGYGSWTQIRD 196 (270)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcChHHHHHHHHHHHHHcCCcHHHHhc
Confidence 499999999999999999 89999985
No 99
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=43.39 E-value=1.5e+02 Score=25.09 Aligned_cols=67 Identities=9% Similarity=0.188 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCcCcccccCccchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10643 674 DRADSLAKRLEQNRKHMSLEAKKATKMENKRELNCFSPGRESTPRPITYKADTSSIPRRIASLTEDVNRQKEREAVLQER 753 (769)
Q Consensus 674 driesl~~~fe~~r~~m~~~AkkaaKlEKKL~~~vllGGYQ~Ra~~~tF~~E~~AiprRle~L~eeV~~q~~REreLQ~r 753 (769)
-++.+|+..++...+.....-.+....|++.. -+..|..++.+|+..|.+++++...+=..+|..
T Consensus 6 kKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~---------------~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~k 70 (81)
T 1ic2_A 6 KKMQMLKLDKENALDRAEQAEADKKAAEERSK---------------QLEDELVALQKKLKGTEDELDKYSESLKDAQEK 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666555544443333333333333 235666788999999999999888776666655
Q ss_pred HH
Q psy10643 754 FG 755 (769)
Q Consensus 754 Y~ 755 (769)
+.
T Consensus 71 Le 72 (81)
T 1ic2_A 71 LE 72 (81)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 100
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=38.75 E-value=1.3e+02 Score=34.20 Aligned_cols=39 Identities=26% Similarity=0.334 Sum_probs=35.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy10643 728 SIPRRIASLTEDVNRQKEREAVLQERFGALDAQLKQLEL 766 (769)
Q Consensus 728 AiprRle~L~eeV~~q~~REreLQ~rY~~L~~e~~~l~~ 766 (769)
-+.+|+..|+++|+.|-.+-+.||..-+++..+...|+.
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEv 152 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEV 152 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999887754
No 101
>2li6_A SWI/SNF chromatin-remodeling complex subunit SWI1; ligand binding, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=35.70 E-value=18 Score=32.86 Aligned_cols=39 Identities=33% Similarity=0.498 Sum_probs=30.5
Q ss_pred HHHHHHHHhCC-------CchhHHHHHhhhcChhhhhhhhccccCC
Q psy10643 19 ILKAAVMKYGK-------NQWSRIASLLHRKSAKQCKARWFEWLDP 57 (769)
Q Consensus 19 ~L~~~V~kyG~-------~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p 57 (769)
.|..+|.+.|. +.|..|+..|+--.+..++..|.++|.|
T Consensus 53 ~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~Lr~~Y~k~L~~ 98 (116)
T 2li6_A 53 YLYMLVQKFGGADQVTRTQQWSMVAQRLQISDYQQLESIYFRILLP 98 (116)
T ss_dssp HHHHHHHHHTSHHHHHHTTCHHHHHHHHTSCCTTHHHHHHHHHHSH
T ss_pred HHHHHHHHhcCHHHccccCcHHHHHHHhCCChHHHHHHHHHHHHHH
Confidence 57778887764 4899999999855577888888887764
No 102
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=30.10 E-value=3.2e+02 Score=25.98 Aligned_cols=26 Identities=15% Similarity=0.316 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10643 730 PRRIASLTEDVNRQKEREAVLQERFG 755 (769)
Q Consensus 730 prRle~L~eeV~~q~~REreLQ~rY~ 755 (769)
...+..+..++..+..+-..++....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (284)
T 1c1g_A 75 EKKATDAEADVASLNRRIQLFEEELD 100 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444443333333333333
No 103
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=29.47 E-value=3.1e+02 Score=27.78 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q psy10643 673 KDRADSLAKRLEQNRKHMSLEAKKATKMENKRE 705 (769)
Q Consensus 673 ~driesl~~~fe~~r~~m~~~AkkaaKlEKKL~ 705 (769)
...+..+......+...+...-.+..+.+++|.
T Consensus 52 ~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~ 84 (256)
T 3na7_A 52 EEEKLALKLQVSKNEQTLQDTNAKIASIQKKMS 84 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555556666666666667777777777
No 104
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=29.18 E-value=55 Score=32.06 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10643 729 IPRRIASLTEDVNRQKEREAVLQERFGALDAQLK 762 (769)
Q Consensus 729 iprRle~L~eeV~~q~~REreLQ~rY~~L~~e~~ 762 (769)
...|+.+|.+||.++..++..++.--+.|.+.+.
T Consensus 95 lq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~ 128 (168)
T 3o0z_A 95 LQARITSLQEEVKHLKHNLEKVEGERKEAQDMLN 128 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3469999999999999998766655555554443
No 105
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=28.90 E-value=2.8e+02 Score=23.90 Aligned_cols=76 Identities=9% Similarity=0.212 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccCCcCcccccCccchhhhhcchHHHHHHHHHHHHHHHHHHHHHH
Q psy10643 672 KKDRADSLAKRLEQNRKHMSLEAKKATKMENKRELNCFSPGRESTPRPITYKADTSSIPRRIASLTEDVNRQKEREAVLQ 751 (769)
Q Consensus 672 ~~driesl~~~fe~~r~~m~~~AkkaaKlEKKL~~~vllGGYQ~Ra~~~tF~~E~~AiprRle~L~eeV~~q~~REreLQ 751 (769)
.++.+..+...|..++..+.+.-+.-..||.++. .+.+|-..+..-+....+.+.++..+-.+|.
T Consensus 12 ~eeEm~~~eeel~~lke~l~k~e~~rkele~~~~---------------~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE 76 (89)
T 3bas_A 12 QEEEMKEQLKQMDKMKEDLAKTERIKKELEEQNV---------------TLLEQKNDLFGSMKQLEDKVEELLSKNYHLE 76 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4577888999999999999988888888888888 4544444444447777777777777777787
Q ss_pred HHHHHHHHHHH
Q psy10643 752 ERFGALDAQLK 762 (769)
Q Consensus 752 ~rY~~L~~e~~ 762 (769)
..+.+|...++
T Consensus 77 ~~l~el~~rl~ 87 (89)
T 3bas_A 77 NEVARLKKLVG 87 (89)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 77777765543
No 106
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=28.84 E-value=67 Score=29.00 Aligned_cols=37 Identities=27% Similarity=0.406 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy10643 729 IPRRIASLTEDVNRQKEREAVLQERFGALDAQLKQLE 765 (769)
Q Consensus 729 iprRle~L~eeV~~q~~REreLQ~rY~~L~~e~~~l~ 765 (769)
+..|+..|+.|+..+...|+.|-+.-+.+...+..+.
T Consensus 4 ~~~~~~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lt 40 (106)
T 2aze_B 4 MGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLS 40 (106)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999998888877664
No 107
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=25.93 E-value=2.6e+02 Score=31.12 Aligned_cols=24 Identities=4% Similarity=0.015 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy10643 737 TEDVNRQKEREAVLQERFGALDAQ 760 (769)
Q Consensus 737 ~eeV~~q~~REreLQ~rY~~L~~e 760 (769)
++++..+.++-.+.+++..++.+|
T Consensus 543 ~~~~~~le~~~~~~~~~~~~l~~e 566 (597)
T 3oja_B 543 EQENIALEKQLDNKRAKQAELRQE 566 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHhhhhhHHHHHHHH
Confidence 344444444444444444444333
No 108
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=23.79 E-value=36 Score=31.40 Aligned_cols=56 Identities=18% Similarity=0.313 Sum_probs=37.6
Q ss_pred HHHHHHHHhCC-------CchhHHHHHhhh-c----ChhhhhhhhccccCCCCCCCCCCHHHHHHHHHHHH
Q psy10643 19 ILKAAVMKYGK-------NQWSRIASLLHR-K----SAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAK 77 (769)
Q Consensus 19 ~L~~~V~kyG~-------~~W~~IA~~Lp~-R----s~~QCr~RW~~~L~p~ikkg~WT~EEDe~Ll~lvk 77 (769)
.|..+|.+.|. +.|..||..|+- . .+...+..|.++|.|= ..++++|-..|..-|.
T Consensus 46 ~Ly~~V~~~GG~~~Vt~~k~W~~Va~~lg~p~~~~sa~~~Lr~~Y~k~L~~Y---E~~~~~e~~~l~~~v~ 113 (121)
T 2rq5_A 46 CFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSY---DSLSPEEHRRLEKEVL 113 (121)
T ss_dssp HHHHHHHHTTSHHHHHHTTCHHHHHHHTCCCTTCSSHHHHHHHHHHTTHHHH---HHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHhcccCcHHHHHHHhCCCCCcCcHHHHHHHHHHHHhHHH---HCcCHHHHhhHHHHHH
Confidence 34555555553 589999999962 1 2346677888888662 2478888888876554
No 109
>2jvw_A Uncharacterized protein; solution structure, alpha helical protein, structural GE unknown function, PSI-2, protein structure initiative; NMR {Vibrio fischeri}
Probab=23.75 E-value=34 Score=30.00 Aligned_cols=45 Identities=36% Similarity=0.782 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhCCCchhHHHHHhhhcChhhhhhhhccccCCCC-------CCCCCCHHHHHHHH
Q psy10643 17 DEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSI-------KKTEWSREEDEKLL 73 (769)
Q Consensus 17 De~L~~~V~kyG~~~W~~IA~~Lp~Rs~~QCr~RW~~~L~p~i-------kkg~WT~EEDe~Ll 73 (769)
+.+|.++|..|| |...+..+.- .|. ..+|++ ++++|..+.-+.|.
T Consensus 18 E~ilt~Lv~~YG---W~~L~~~i~I----~CF-----~~~PSikSSLKFLRKTpWAR~KVE~lY 69 (88)
T 2jvw_A 18 QKLLTELVEHYG---WEELSYMVNI----NCF-----KKDPSIKSSLKFLRKTDWARERVENIY 69 (88)
T ss_dssp HHHHHHHHHHTC---HHHHHHHTTS----SST-----TSSCCHHHHHHHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC---HHHHHhhccc----ccC-----CCCCchHHHHHHHhcCHhHHHHHHHHH
Confidence 568999999999 9999988762 232 134543 47899999887765
No 110
>1ig6_A MRF-2, modulator recognition factor 2; DNA binding protein, DNA-binding motif, protein-DNA interaction; NMR {Homo sapiens} SCOP: a.4.3.1 PDB: 2oeh_A
Probab=23.58 E-value=45 Score=29.66 Aligned_cols=40 Identities=23% Similarity=0.286 Sum_probs=28.4
Q ss_pred HHHHHHHHHhCC-------CchhHHHHHhhhc-----ChhhhhhhhccccCC
Q psy10643 18 EILKAAVMKYGK-------NQWSRIASLLHRK-----SAKQCKARWFEWLDP 57 (769)
Q Consensus 18 e~L~~~V~kyG~-------~~W~~IA~~Lp~R-----s~~QCr~RW~~~L~p 57 (769)
-.|..+|.+.|. +.|..|+..|+-- .+.+++..|.++|.|
T Consensus 36 ~~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~s~~~~Lk~~Y~k~L~~ 87 (107)
T 1ig6_A 36 WTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILP 87 (107)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTCTTTTTTHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCHHHhcccCcHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHH
Confidence 357777877763 4899999999721 235677777777765
No 111
>2jrz_A Histone demethylase jarid1C; bright/ARID domain, helical, structural genomics, structural genomics consortium, SGC, oxidoreductase; NMR {Homo sapiens} PDB: 2yqe_A
Probab=21.41 E-value=69 Score=29.06 Aligned_cols=39 Identities=21% Similarity=0.394 Sum_probs=27.8
Q ss_pred HHHHHHHHhCC-------CchhHHHHHhhhcC----hhhhhhhhccccCC
Q psy10643 19 ILKAAVMKYGK-------NQWSRIASLLHRKS----AKQCKARWFEWLDP 57 (769)
Q Consensus 19 ~L~~~V~kyG~-------~~W~~IA~~Lp~Rs----~~QCr~RW~~~L~p 57 (769)
.|..+|.+.|. +.|..|+..|+--. +.+.+..|.++|.|
T Consensus 44 ~Ly~~V~~~GG~~~V~~~~~W~~Va~~lg~~~~~~a~~~Lk~~Y~k~L~~ 93 (117)
T 2jrz_A 44 SLSKIVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYP 93 (117)
T ss_dssp HHHHHHHHHTCHHHHHHTTTHHHHHHHTTCCTTCTHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHccCHHHhcccCcHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 57788888874 47999999997332 44567777777644
No 112
>2jxj_A Histone demethylase jarid1A; ARID domain, chromatin regulator, developmental protein, dioxygenase, iron, metal-binding, nucleus, oxidoreductase; NMR {Homo sapiens}
Probab=21.25 E-value=64 Score=28.00 Aligned_cols=38 Identities=24% Similarity=0.307 Sum_probs=25.8
Q ss_pred HHHHHHHHhCC-------CchhHHHHHhhhcC----hhhhhhhhccccC
Q psy10643 19 ILKAAVMKYGK-------NQWSRIASLLHRKS----AKQCKARWFEWLD 56 (769)
Q Consensus 19 ~L~~~V~kyG~-------~~W~~IA~~Lp~Rs----~~QCr~RW~~~L~ 56 (769)
.|..+|.+.|. +.|..|+..|+--. +.+++..|.++|.
T Consensus 40 ~Ly~~V~~~GG~~~V~~~~~W~~v~~~lg~~~~~~~~~~Lk~~Y~k~L~ 88 (96)
T 2jxj_A 40 ALSKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILY 88 (96)
T ss_dssp HHHHHHHHHHTTHHHHHHTTHHHHHHHHTCCSCSCHHHHHHHHHTTTTH
T ss_pred HHHHHHHHcCCHHHHccCCcHHHHHHHhCCCCcCcHHHHHHHHHHHHHH
Confidence 46677776653 48999999997321 4466777777664
Done!