BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy10647
MTRKLIKFVILFDNTNLVYFPGQYLSGRVLIELKDDTPALGFHRSKNNMTRKLIKFVILF
DNTNLVYFPGQYLSGRVLIELKDDTPALALLQ

High Scoring Gene Products

Symbol, full name Information P value
Vdup1
Vitamin D[[3]] up-regulated protein 1 		protein from Drosophila melanogaster 6.5e-14

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy10647
        (92 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0035103 - symbol:Vdup1 "Vitamin D[[3]] up-regulate...   184  6.5e-14   1


>FB|FBgn0035103 [details] [associations]
            symbol:Vdup1 "Vitamin D[[3]] up-regulated protein 1"
            species:7227 "Drosophila melanogaster" [GO:0007165 "signal
            transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0010629 "negative regulation of gene expression" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] InterPro:IPR014752 Pfam:PF00339
            InterPro:IPR011022 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
            EMBL:AE014296 Gene3D:2.60.40.640 InterPro:IPR011021
            InterPro:IPR014756 Pfam:PF02752 SMART:SM01017 SUPFAM:SSF81296
            GO:GO:0010629 GeneTree:ENSGT00550000074356 RefSeq:NP_001163303.1
            RefSeq:NP_612004.2 RefSeq:NP_728479.1 RefSeq:NP_995943.1
            UniGene:Dm.5841 IntAct:Q0E8K8 EnsemblMetazoa:FBtr0072534
            EnsemblMetazoa:FBtr0072535 EnsemblMetazoa:FBtr0072536
            EnsemblMetazoa:FBtr0301890 EnsemblMetazoa:FBtr0334069 GeneID:38023
            KEGG:dme:Dmel_CG7047 UCSC:CG7047-RA CTD:38023 FlyBase:FBgn0035103
            eggNOG:NOG323582 InParanoid:Q0E8K8 OMA:TPALGLH OrthoDB:EOG4XKSPM
            GenomeRNAi:38023 NextBio:806606 Uniprot:Q0E8K8
        Length = 342

 Score = 184 (69.8 bits), Expect = 6.5e-14, P = 6.5e-14
 Identities = 33/43 (76%), Positives = 41/43 (95%)

Query:     1 MTRKLIKFVILFDNTNLVYFPGQYLSGRVLIELKDDTPALGFH 43
             M RKL+KF+I+FDNT+L+YFPGQ+LSGRVLIEL+D+TPALG H
Sbjct:     1 MPRKLLKFLIIFDNTSLLYFPGQFLSGRVLIELQDETPALGLH 43

 Score = 174 (66.3 bits), Expect = 8.5e-13, P = 8.5e-13
 Identities = 32/42 (76%), Positives = 40/42 (95%)

Query:    49 MTRKLIKFVILFDNTNLVYFPGQYLSGRVLIELKDDTPALAL 90
             M RKL+KF+I+FDNT+L+YFPGQ+LSGRVLIEL+D+TPAL L
Sbjct:     1 MPRKLLKFLIIFDNTSLLYFPGQFLSGRVLIELQDETPALGL 42


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.146   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       92        92   0.00091  102 3  11 22  0.43    29
                                                     29  0.40    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  393 (42 KB)
  Total size of DFA:  74 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.97u 0.10s 10.07t   Elapsed:  00:00:00
  Total cpu time:  9.97u 0.10s 10.07t   Elapsed:  00:00:00
  Start:  Thu Aug 15 17:10:10 2013   End:  Thu Aug 15 17:10:10 2013

Back to top