Query psy10650
Match_columns 446
No_of_seqs 237 out of 998
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 23:57:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1suj_A CONE arrestin; sensory 100.0 2E-28 6.7E-33 249.4 22.8 214 89-411 104-354 (392)
2 1g4m_A Beta-arrestin1; sensory 100.0 1.3E-28 4.4E-33 252.7 21.3 215 90-412 108-358 (393)
3 3ugu_A S-arrestin; arrestin fo 99.9 1.2E-22 3.9E-27 203.9 24.4 130 91-264 122-255 (380)
4 2r51_A Vacuolar protein sortin 99.8 3.5E-19 1.2E-23 178.8 24.6 195 116-409 102-300 (340)
5 2fau_A Vacuolar protein sortin 99.7 5.8E-15 2E-19 148.1 25.7 179 116-392 102-284 (341)
6 2fau_A Vacuolar protein sortin 99.1 7E-09 2.4E-13 104.0 19.1 153 87-308 102-256 (341)
7 1suj_A CONE arrestin; sensory 98.8 2.9E-08 9.9E-13 101.2 12.1 52 276-327 187-238 (392)
8 3ugu_A S-arrestin; arrestin fo 98.6 2.2E-07 7.5E-12 93.5 11.5 126 277-407 207-367 (380)
9 1g4m_A Beta-arrestin1; sensory 97.5 9E-05 3.1E-09 75.8 5.5 53 275-327 189-241 (393)
10 2r51_A Vacuolar protein sortin 97.2 0.014 4.8E-07 58.3 17.4 140 236-408 11-156 (340)
11 2p9r_A Alpha-2-M, alpha-2-macr 88.6 1.6 5.6E-05 35.0 7.9 30 224-253 4-33 (102)
12 3isy_A Bsupi, intracellular pr 81.5 5.2 0.00018 33.7 7.8 86 218-308 3-88 (120)
13 2p9r_A Alpha-2-M, alpha-2-macr 76.2 4.8 0.00016 32.1 5.8 31 285-315 4-34 (102)
14 1so9_A Cytochrome C oxidase as 73.2 3.2 0.00011 36.9 4.3 59 234-304 59-118 (164)
15 2pn5_A TEP1R, thioester-contai 71.7 52 0.0018 38.1 15.3 38 216-253 94-131 (1325)
16 2hr0_A Complement C3 beta chai 69.9 33 0.0011 36.4 12.2 35 282-316 209-245 (645)
17 3l9o_A ATP-dependent RNA helic 68.5 1 3.5E-05 51.6 0.0 8 373-380 710-717 (1108)
18 2icn_B Prolactin-inducible pro 63.7 37 0.0013 28.3 8.7 45 221-267 7-52 (118)
19 1yew_A Particulate methane mon 62.5 28 0.00097 34.6 8.9 86 219-308 247-336 (382)
20 2pn5_A TEP1R, thioester-contai 59.4 2.3E+02 0.008 32.7 17.5 35 281-315 98-132 (1325)
21 3hrz_B Cobra venom factor; ser 55.9 74 0.0025 29.7 10.5 42 219-262 79-120 (252)
22 3es6_B Prolactin-inducible pro 49.3 89 0.0031 25.8 8.7 41 221-263 7-47 (118)
23 3rfr_A PMOB; membrane, oxidore 49.2 30 0.001 34.8 6.6 79 224-308 284-368 (419)
24 2xzz_A Protein-glutamine gamma 40.3 1.4E+02 0.0048 23.9 8.6 66 224-308 8-73 (102)
25 1nep_A EPV20, BNPC2, epididyma 37.8 85 0.0029 26.1 7.0 51 346-406 79-129 (130)
26 2bm3_A Type 2 cohesin, scaffol 36.7 37 0.0013 29.8 4.5 41 218-258 3-43 (166)
27 3hrz_A Cobra venom factor; ser 36.0 1.6E+02 0.0054 31.2 10.4 94 223-316 105-237 (627)
28 3vmn_A Dextranase; TIM barrel, 34.0 35 0.0012 36.5 4.7 28 224-251 9-36 (643)
29 3vmn_A Dextranase; TIM barrel, 31.2 48 0.0016 35.5 5.1 28 285-312 9-36 (643)
30 3hrz_B Cobra venom factor; ser 29.9 2.6E+02 0.0089 25.8 9.7 40 282-323 81-120 (252)
31 4fxk_A Complement C4 beta chai 28.1 1.1E+02 0.0037 32.1 7.4 31 223-253 121-151 (656)
32 1rxt_A Myristoyl-, glycylpepti 27.2 13 0.00045 38.4 0.0 14 232-247 224-237 (496)
33 1kyf_A Alpha-adaptin C; protei 27.0 2.2E+02 0.0076 26.3 8.6 108 278-408 26-134 (247)
34 3cu7_A Complement C5; Mg domai 26.5 2.1E+02 0.0071 34.1 10.1 36 216-251 118-153 (1676)
35 2lv4_A Putative outer membrane 25.6 1.1E+02 0.0038 25.8 5.4 65 226-305 53-118 (146)
36 2b39_A C3; thioester, immune d 25.5 1.3E+02 0.0045 35.8 8.1 102 215-316 120-266 (1661)
37 3mnm_A ADP-ribosylation factor 24.9 2.9E+02 0.0099 22.7 12.1 95 216-332 13-110 (123)
38 2hr0_B Complement C3 alpha' ch 24.8 3.1E+02 0.01 30.3 10.6 41 219-261 78-119 (915)
39 1ex0_A Coagulation factor XIII 24.2 4.8E+02 0.017 28.3 11.5 89 282-381 517-607 (731)
40 3es6_B Prolactin-inducible pro 24.1 81 0.0028 26.1 4.3 46 282-329 7-52 (118)
41 2g30_A AP-2 complex subunit be 23.9 1.4E+02 0.0047 28.1 6.5 42 220-265 42-83 (258)
42 2x3c_A Toxic extracellular end 22.9 1.4E+02 0.0047 29.4 6.5 37 220-259 22-58 (343)
43 3isy_A Bsupi, intracellular pr 22.5 1E+02 0.0036 25.6 4.7 31 280-314 4-34 (120)
44 4acq_A Alpha-2-macroglobulin; 21.5 3.2E+02 0.011 32.1 10.2 39 216-254 98-136 (1451)
45 1g0d_A Protein-glutamine gamma 21.4 4.9E+02 0.017 28.0 10.8 46 282-330 472-517 (695)
46 3zy7_A AP-1 complex subunit ga 21.1 3.4E+02 0.012 22.2 10.1 93 217-332 10-105 (122)
47 2k6w_A Putative uncharacterize 21.1 1.1E+02 0.0037 25.3 4.6 37 217-253 77-113 (120)
No 1
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=99.96 E-value=2e-28 Score=249.42 Aligned_cols=214 Identities=23% Similarity=0.297 Sum_probs=144.8
Q ss_pred CCeeeEeeeEeecCCCCCCccccCCCeeecCeEEEEeEEEecCCCCCceEEeecccEEEEEEEEEecCCCCC-ccceEEE
Q psy10650 89 SPGIHSFPFKLGLPLGLPSTFLGQAPVLLSPGIHSFPFKLGLPLGLPSTFLGKHGWVQYFCKAALREPTGYT-HKNQQVF 167 (446)
Q Consensus 89 p~G~H~fpF~~~LP~~LPsSfeg~~g~~l~~G~~~~pf~f~LP~~lP~Sf~~~~g~IrY~i~~~i~~p~~~d-~~~~~~~ 167 (446)
++|.|.|||+|+||.+||+||+...+ ++++|++|.|+|.|+|.++++|... .+.....
T Consensus 104 ~~G~h~fPFsFqLP~~lPsSf~lqp~---------------------~~~eGk~g~VrY~VKa~i~~~~~dk~~Kr~tv~ 162 (392)
T 1suj_A 104 KLGAHAYPFCFKMGTNLPCSVTLQPG---------------------PDDTGKSCGVDFEVKAFCAENLEEKIHKRNSVQ 162 (392)
T ss_dssp HHCSSEEEEEECCCSSCCCCEEECCC---------------------TTCCSCCEEEEEEEEEEEESCTTSCCCGGGEEE
T ss_pred cccCeeEeEEeeCCCCCCCeEEeccC---------------------CccCCCceeEEEEEEEEEcCChhhccceEEEEE
Confidence 78888888888888888888865541 3567788999999999999987321 2211222
Q ss_pred EEEeccccCCCCCccceeeeccccccCCCCCCCCCCCceeEeEeEeeeeecCCcEEEEEEEcccccccCceEEEEEEEEc
Q psy10650 168 IIMSPIDLNLEPPILSVFIIMSPIDLNLEPPILSQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINATVYN 247 (446)
Q Consensus 168 ~V~~~~dl~~~p~~~~~~~~~~P~~~~~~~p~~~~p~~~~~~k~~~~~c~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N 247 (446)
.++. +++..|... . ..| ..+.++. |||++|+|+|+++|||.||+|||+|+|++.|+|
T Consensus 163 l~ir--~l~~~P~~~-----------~------~~p-~~e~~k~---f~~ssGpl~l~vsLdK~~Y~pGE~I~V~v~I~N 219 (392)
T 1suj_A 163 LVIR--KVQFAPANL-----------G------VAP-KTEITRQ---FMLSDRPLHLEASLDKEIYYHGEPINVNVKINN 219 (392)
T ss_dssp EEEE--EEECCCSSC-----------C------CCC-CCEEEEE---EEETTEEEEEEEEESCSEEETTCCEEEEEEEEE
T ss_pred Eeee--ccccCcccc-----------C------CCC-eeEEEEE---eEecCCCEEEEEEeCCccccCCCEEEEEEEEEC
Confidence 2233 333222211 0 012 2333333 579999999999999999999999999999999
Q ss_pred CCcceeEeeeceeeeccccccccceeeeeEecCCceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEE
Q psy10650 248 RSKITVKSTKAALTEQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQY 327 (446)
Q Consensus 248 ~S~k~ik~i~~~L~q~~~~~~~~~~~~~~c~~~G~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y 327 (446)
.|++.|+.|+++|.|....+ + |
T Consensus 220 ~Ssk~Vk~Ikv~L~Q~~~v~---------------------l----~--------------------------------- 241 (392)
T 1suj_A 220 TTGKIVKKIKIIVEQVTDVV---------------------L----F--------------------------------- 241 (392)
T ss_dssp CSSSEEEEEEEEEEEEEEEC---------------------S----S---------------------------------
T ss_pred CCCCcEeEEEEEEEEEEEEE---------------------E----e---------------------------------
Confidence 99999998888888752110 0 0
Q ss_pred EeccceeeeeEEEEeeee-cCccCCCCccceeeeeEecCCCC-----------------CCCcCCCce-----------E
Q psy10650 328 LARNKVLESETRELASLT-RGKIKPGERDDWTNQQLYVPPLP-----------------PTNLRGCHL-----------I 378 (446)
Q Consensus 328 ~a~~~~~~~~~~~V~~~~-~~~V~~g~~~~~~~~~L~IP~i~-----------------PT~l~~~~i-----------I 378 (446)
+.+. ..++|+++. ..+|.+|++.++ ... .+|.++ ||.+..|.+ |
T Consensus 242 -s~~~----~k~~Va~~e~~e~V~pgst~~k-~~~-L~P~l~~n~~k~glaldg~lk~~dTnLassti~~~~~~~~~~gI 314 (392)
T 1suj_A 242 -SLDK----YVKTVCAEETNDTVAANSTLSK-TFS-VTPMLANNREKRGLALDGKLKHEDTNLASTTVIRPGMDKEVLGI 314 (392)
T ss_dssp -SCCE----EEEEEEEEECCCCBCTTEEEEE-EEE-ECCCGGGCSCCTTCCBSSCTTBSSCCBCCCCCCCTTSCGGGGSE
T ss_pred -cCCc----EEEEEEEEecCCCcCCCCEEEE-EEE-EeccccCCCccceeeecccccCCCccccccccccCCCCccccce
Confidence 0000 012444443 458888877332 222 246666 576666776 8
Q ss_pred EEEEEEEEEEecCC--C-----CCCeEEEecEEEEeecCC
Q psy10650 379 KIQYDVFFIVDPKS--I-----EKPVKLQLPIMLATYPFR 411 (446)
Q Consensus 379 ~V~Y~L~V~v~~~~--~-----~~~l~v~lPIiIGtvPl~ 411 (446)
.|+|.|+|.+.+++ | ..++.++|||+|+.....
T Consensus 315 ~VsY~vkVkl~v~~gg~~~~~~s~d~~velPf~L~~p~P~ 354 (392)
T 1suj_A 315 LVSYKVKVHLVVARGGILGDLTSSDVAVELPLTLMHPKPS 354 (392)
T ss_dssp EEEEEEEEEEEEETTSSTTCCCCEEEEEEEEEEEECCCCC
T ss_pred EEEEEEEEEEEEcCCcccccccccCeeEEECeEEeCCCCC
Confidence 99999999999876 3 259999999999875443
No 2
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=99.96 E-value=1.3e-28 Score=252.71 Aligned_cols=215 Identities=23% Similarity=0.260 Sum_probs=141.1
Q ss_pred CeeeEeeeEeecCCCCCCccccCCCeeecCeEEEEeEEEecCCCCCceEEeecccEEEEEEEEEecCCCCCccceEEEEE
Q psy10650 90 PGIHSFPFKLGLPLGLPSTFLGQAPVLLSPGIHSFPFKLGLPLGLPSTFLGKHGWVQYFCKAALREPTGYTHKNQQVFII 169 (446)
Q Consensus 90 ~G~H~fpF~~~LP~~LPsSfeg~~g~~l~~G~~~~pf~f~LP~~lP~Sf~~~~g~IrY~i~~~i~~p~~~d~~~~~~~~V 169 (446)
+|.|.|||+|+||.+||+||+...+ +-..|.+|.|+|.|+|.+++++ .+....+.+++
T Consensus 108 ~G~h~fPF~f~LP~~lPsSfelq~~---------------------~~d~G~~g~IrY~Vka~i~~~~-~~k~~K~~~v~ 165 (393)
T 1g4m_A 108 LGEHAYPFTFEIPPNLPCSVTLQPG---------------------PEDTGKACGVDYEVKAFCAENL-EEKIHKRNSVR 165 (393)
T ss_dssp SCTTEEEEEECCCTTSCCCEEEECC---------------------GGGGGGCEEEEEEEEEEEESST-TSCCCGGGEEE
T ss_pred CCceEEEEEeeCCCCCCceEEEccc---------------------cccCCCcEEEEEEEEEEEcCCc-ccccceEEEEE
Confidence 7777777777777777777752210 0001457899999999999883 22211222222
Q ss_pred EeccccCCCCCccceeeeccccccCCCCCCCCCCCceeEeEeEeeeeecCCcEEEEEEEcccccccCceEEEEEEEEcCC
Q psy10650 170 MSPIDLNLEPPILSVFIIMSPIDLNLEPPILSQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINATVYNRS 249 (446)
Q Consensus 170 ~~~~dl~~~p~~~~~~~~~~P~~~~~~~p~~~~p~~~~~~k~~~~~c~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S 249 (446)
+...+++..|.. +..|...+.++. |||++|+|+|+++|||+||+|||+|+|++.|+|.|
T Consensus 166 l~i~~l~~~p~~------------------~~~~~~~e~~k~---fc~~sG~l~l~~sldk~~Y~pGE~I~v~v~I~N~S 224 (393)
T 1g4m_A 166 LVIRKVQYAPER------------------PGPQPTAETTRQ---FLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNT 224 (393)
T ss_dssp EEEEEEECCCCC------------------CSSCCCCEEEEE---CBSSSSCEEEEEEESCSEEETTCCEEEEEEEEECS
T ss_pred EeccccccCchh------------------hcCCCceEEEEE---EEEcCCCEEEEEEECCceEcCCCEEEEEEEEEcCC
Confidence 333333332221 112223344443 46899999999999999999999999999999999
Q ss_pred cceeEeeeceeeeccccccccceeeeeEecCCceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEEEe
Q psy10650 250 KITVKSTKAALTEQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQYLA 329 (446)
Q Consensus 250 ~k~ik~i~~~L~q~~~~~~~~~~~~~~c~~~G~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y~a 329 (446)
++.|+.|+++|.|.... | .| +
T Consensus 225 ~k~Vk~Ikv~L~Q~~~~----------~---------------~~----------------------------------s 245 (393)
T 1g4m_A 225 NKTVKKIKISVRQYADI----------C---------------LF----------------------------------N 245 (393)
T ss_dssp SCCEEEEEEEEEEEEEE----------C---------------SS----------------------------------B
T ss_pred CCEEeEEEEEEEEEEEE----------E---------------Ee----------------------------------c
Confidence 99999999998885310 0 00 0
Q ss_pred ccceeeeeEEEEeeee-cCccCCCCccceeeeeEecCCCCC-----------------CCcCCCceEE-----------E
Q psy10650 330 RNKVLESETRELASLT-RGKIKPGERDDWTNQQLYVPPLPP-----------------TNLRGCHLIK-----------I 380 (446)
Q Consensus 330 ~~~~~~~~~~~V~~~~-~~~V~~g~~~~~~~~~L~IP~i~P-----------------T~l~~~~iI~-----------V 380 (446)
.+. ..++|++.+ ..+|.+|++..+ ...| +|.++| |++..|.||+ |
T Consensus 246 ~~~----~k~~Va~~e~~~~V~~gs~~~~-~~~L-~P~l~p~~~~~~~aldg~lk~~dt~l~ss~ii~~~~~~~~~gi~V 319 (393)
T 1g4m_A 246 TAQ----YKCPVAMEEADDTVAPSSTFCK-VYTL-TPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIV 319 (393)
T ss_dssp CEE----EEEEEEEEEECCCBCTTEEEEE-EEEE-CCCGGGTTTCSSEEESSCTTSTTCCBCCCCCCCTTCCSGGGSEEE
T ss_pred CCc----eEEEEEEEecCCcCCCCCEEee-EEEE-cCCCCCcccccceeeccccccCCcccccceeecCCCCccccceEE
Confidence 000 012344433 347888877644 4344 677877 7778899999 9
Q ss_pred EEEEEEEEecCC--C-----CCCeEEEecEEEEeecCCC
Q psy10650 381 QYDVFFIVDPKS--I-----EKPVKLQLPIMLATYPFRQ 412 (446)
Q Consensus 381 ~Y~L~V~v~~~~--~-----~~~l~v~lPIiIGtvPl~~ 412 (446)
+|.|+|.+.+++ | ..++.++|||+||+.+-..
T Consensus 320 sY~vkV~l~v~~gg~~~~~~~~~l~~~lPi~i~~p~p~~ 358 (393)
T 1g4m_A 320 SYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKPKE 358 (393)
T ss_dssp EEEEEEEEEECCC--------CEEEEEEEEEEECCCCC-
T ss_pred EEEEEEEEEecCCCcccccccccEEEEeCEEEecCCCCc
Confidence 999999998874 2 4699999999999966544
No 3
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=99.91 E-value=1.2e-22 Score=203.90 Aligned_cols=130 Identities=25% Similarity=0.333 Sum_probs=93.8
Q ss_pred eeeEeeeEeecCCCCCCccccCCCeeecCeEEEEeEEEecCCCCCceEEeecccEEEEEEEEEecCCC--CC--ccceEE
Q psy10650 91 GIHSFPFKLGLPLGLPSTFLGQAPVLLSPGIHSFPFKLGLPLGLPSTFLGKHGWVQYFCKAALREPTG--YT--HKNQQV 166 (446)
Q Consensus 91 G~H~fpF~~~LP~~LPsSfeg~~g~~l~~G~~~~pf~f~LP~~lP~Sf~~~~g~IrY~i~~~i~~p~~--~d--~~~~~~ 166 (446)
|.|.|||.|+||.+||+||...++ +..+|+.|.|+|.|++.+.++|. .+ .+....
T Consensus 122 G~nayPF~f~LP~~lPsSv~LQp~---------------------p~d~Gk~cgV~YeVKafia~~~~~~~dk~~Kr~sV 180 (380)
T 3ugu_A 122 GANTYPFLLTFPDYLPCSVMLQPA---------------------PQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSV 180 (380)
T ss_dssp CTTEEEEEECCCSSCCCSEEECCC---------------------TTCCSCCEEEEEEEEEEEEBCCSSSSSBCCGGGEE
T ss_pred CcCceeEEEeCCCCCCCEEEeccC---------------------CccCCCccceEEEEEEEEccCcccccccccccceE
Confidence 666666666666666666655442 11246778999999999999873 32 333344
Q ss_pred EEEEeccccCCCCCccceeeeccccccCCCCCCCCCCCceeEeEeEeeeeecCCcEEEEEEEcccccccCceEEEEEEEE
Q psy10650 167 FIIMSPIDLNLEPPILSVFIIMSPIDLNLEPPILSQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINATVY 246 (446)
Q Consensus 167 ~~V~~~~dl~~~p~~~~~~~~~~P~~~~~~~p~~~~p~~~~~~k~~~~~c~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~ 246 (446)
..++.+++.. |... ..+-..+.+|.| ||++|+|+|+++|||.||+|||+|+|++.|+
T Consensus 181 ~L~Irklq~a--P~~~------------------~~~P~~e~~K~F---~~ssGpl~L~vsLdK~~Y~pGE~I~V~v~I~ 237 (380)
T 3ugu_A 181 RLLIRKVQHA--PRDM------------------GPQPRAEASWQF---FMSDKPLRLAVSLSKEIYYHGEPIPVTVAVT 237 (380)
T ss_dssp EEEEEEEEBC--CSCC------------------CCCCEEEEEEEC---TTCCCEEEEEEEESCSEEETTCCEEEEEEEE
T ss_pred EEeeeecccC--Cccc------------------CCCCcceEEEEe---EecCCCEEEEEEeCCccCcCCCEEEEEEEEE
Confidence 4455555443 2110 112256777776 5799999999999999999999999999999
Q ss_pred cCCcceeEeeeceeeecc
Q psy10650 247 NRSKITVKSTKAALTEQP 264 (446)
Q Consensus 247 N~S~k~ik~i~~~L~q~~ 264 (446)
|+|++.|+.|+++|.|..
T Consensus 238 N~Ssk~Vk~Ikv~L~Q~~ 255 (380)
T 3ugu_A 238 NSTEKTVKKIKVLVEQVT 255 (380)
T ss_dssp ECSSSCEEEEEEEEEEEE
T ss_pred cCCCCeEeEEEEEEEEEE
Confidence 999999999999999863
No 4
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=99.84 E-value=3.5e-19 Score=178.77 Aligned_cols=195 Identities=14% Similarity=0.166 Sum_probs=136.2
Q ss_pred eecCeEEEEeEEEecCCCCCceEEeecccEEEEEEEEEecCCCCCccceEEEEEEeccccCCCCCccceeeeccccccCC
Q psy10650 116 LLSPGIHSFPFKLGLPLGLPSTFLGKHGWVQYFCKAALREPTGYTHKNQQVFIIMSPIDLNLEPPILSVFIIMSPIDLNL 195 (446)
Q Consensus 116 ~l~~G~~~~pf~f~LP~~lP~Sf~~~~g~IrY~i~~~i~~p~~~d~~~~~~~~V~~~~dl~~~p~~~~~~~~~~P~~~~~ 195 (446)
.|++|.| |||+|.||..+|.||+|.+|.|||.|+++|+|||. |....+.|.|.... ..
T Consensus 102 ~L~~G~~-fpF~F~lp~~l~eSy~G~~g~IrY~vkv~i~Rp~~-di~~~~eF~V~~~~---~~----------------- 159 (340)
T 2r51_A 102 EITQSQA-FDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLN-DVVKEMDIVVHTLS---TY----------------- 159 (340)
T ss_dssp EECSCEE-EEEEECSBCCCSCCEECSSEEEEEEEEEEECCSSC-CEEEEEEEEEECCC---CC-----------------
T ss_pred ccCCCcE-EeeEeCCCCCCCcCeEeeeEEEEEEEEEEEEecCC-CceEEEEEEEEeCC---CC-----------------
Confidence 6888999 99999999999999999999999999999999998 88888999988742 11
Q ss_pred CCCCCCCCCceeEeEeEeeeeecCCcEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeeeccccccccceeee
Q psy10650 196 EPPILSQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQPFDCEIEHKLGV 275 (446)
Q Consensus 196 ~~p~~~~p~~~~~~k~~~~~c~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~~~~~~~~~ 275 (446)
|.+..|+..+ +|+.+| +++++.+++++|+|||.|...+.+. .|+..|+.+.++|
T Consensus 160 --p~~~~pIk~E----vgi~~c----l~Ie~~~~ks~y~lgd~I~G~I~f~-~s~i~Ik~iel~L--------------- 213 (340)
T 2r51_A 160 --PELNSSIKME----VGIEDC----LHIEFEYNKSKYHLKDVIVGKIYFL-LVRIKIKHMEIDI--------------- 213 (340)
T ss_dssp --CCCCCCEEEE----EEETTT----EEEEEEESCSEEETTCEEEEEEEEE-EECSCEEEEEEEE---------------
T ss_pred --CccCCCEecc----ccCCce----EEEEEEECcccccCCCeEEEEEEEE-EeeceeEEEEEEE---------------
Confidence 1122344433 244333 6777777777777777666655555 4445555555555
Q ss_pred eEecCCceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEEEeccceeeeeEEEEeee--ecCccCCCC
Q psy10650 276 ACVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQYLARNKVLESETRELASL--TRGKIKPGE 353 (446)
Q Consensus 276 ~c~~~G~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y~a~~~~~~~~~~~V~~~--~~~~V~~g~ 353 (446)
+|..+|.+.... ..+..+|++. +.+.+..|.
T Consensus 214 ----------------------------------------------iR~Et~~~~~~~-~~e~~~i~k~eImdG~p~rge 246 (340)
T 2r51_A 214 ----------------------------------------------IKRETTGTGPNV-YHENDTIAKYEIMDGAPVRGE 246 (340)
T ss_dssp ----------------------------------------------EEEEEEEETTEE-EEEEEEEEEEEEEESCCCTTC
T ss_pred ----------------------------------------------EEEEEEecCCCe-eEEEEEEEEEEEecCCccCCC
Confidence 444444433221 1233344432 234444555
Q ss_pred ccceeeeeEecCC--CCCCCcCCCceEEEEEEEEEEEecCCCCCCeEEEecEEEEeec
Q psy10650 354 RDDWTNQQLYVPP--LPPTNLRGCHLIKIQYDVFFIVDPKSIEKPVKLQLPIMLATYP 409 (446)
Q Consensus 354 ~~~~~~~~L~IP~--i~PT~l~~~~iI~V~Y~L~V~v~~~~~~~~l~v~lPIiIGtvP 409 (446)
.. ...|.+|+ ++||....|++|+|+|+|.|.+...+. ..+...+||+|+-..
T Consensus 247 ~I---Pirl~Lp~~~l~PT~~~~~~~fsV~Y~Lnlvl~~e~~-~~~~kq~pI~L~R~~ 300 (340)
T 2r51_A 247 SI---PIRLFLAGYELTPTMRDINKKFSVRYYLNLVLIDEEE-RRYFKQQEVVLWRKG 300 (340)
T ss_dssp EE---EEEEEGGGSCCCCCEEEETTTEEEEEEEEEEEEETTC-CEEEEEEEEEEECCC
T ss_pred EE---EEEEECCCCCCCCCccccCCeEEEEEEEEEEEEeCCC-cEEEEEeeEEEEECC
Confidence 43 34677887 899974449999999999999988875 589999999999865
No 5
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=99.69 E-value=5.8e-15 Score=148.11 Aligned_cols=179 Identities=14% Similarity=0.186 Sum_probs=121.9
Q ss_pred eecCeEEEEeEEEecCCCCCceEEeecccEEEEEEEEEecCCCCCccceEEEEEEeccccCCCCCccceeeeccccccCC
Q psy10650 116 LLSPGIHSFPFKLGLPLGLPSTFLGKHGWVQYFCKAALREPTGYTHKNQQVFIIMSPIDLNLEPPILSVFIIMSPIDLNL 195 (446)
Q Consensus 116 ~l~~G~~~~pf~f~LP~~lP~Sf~~~~g~IrY~i~~~i~~p~~~d~~~~~~~~V~~~~dl~~~p~~~~~~~~~~P~~~~~ 195 (446)
.|++| |.|||.|.+|..++.||+|.+|.|||.|+++|+|+|. |......|.|....+. |.
T Consensus 102 ~L~~g-~~fpF~F~~~~~~~eSy~G~~~~IrY~vrv~i~R~~~-di~~~~eF~V~~~~~~---p~--------------- 161 (341)
T 2fau_A 102 ELTQS-RSYDFEFMQVEKPYESYIGANVRLRYFLKVTIVRRLT-DLVKEYDLIVHQLATY---PD--------------- 161 (341)
T ss_dssp EECSC-EEEEEEECSCCCCSCCEECSSEEEEEEEEEEECCSSS-CEEEEEEEEECCCBCC---CC---------------
T ss_pred ccCCC-cEEeeEeCCCCCCCcceEeeEEEEEEEEEEEEEecCc-ceeEEEEEEEEeCCCC---CC---------------
Confidence 57889 9999999998889999999999999999999999998 8888888988863211 11
Q ss_pred CCCCCCCCCceeEeEeEeeeeecCCcEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeeeccccccccceeee
Q psy10650 196 EPPILSQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQPFDCEIEHKLGV 275 (446)
Q Consensus 196 ~~p~~~~p~~~~~~k~~~~~c~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~~~~~~~~~ 275 (446)
...|+..+ ++ .+++
T Consensus 162 ----~~~pi~~e----vg----ied~------------------------------------------------------ 175 (341)
T 2fau_A 162 ----VNNSIKME----VG----IEDX------------------------------------------------------ 175 (341)
T ss_dssp ----CCCCEEEE----EE----ETTT------------------------------------------------------
T ss_pred ----CCCCeEEE----Ee----cccc------------------------------------------------------
Confidence 11232211 00 1222
Q ss_pred eEecCCceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEEEeccceeeeeEEEEeeeec--CccCCCC
Q psy10650 276 ACVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQYLARNKVLESETRELASLTR--GKIKPGE 353 (446)
Q Consensus 276 ~c~~~G~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y~a~~~~~~~~~~~V~~~~~--~~V~~g~ 353 (446)
+++.+.+++++|.+||.|...+.+. .++..|+.+++.|+|..+|.+..... .+..++.+... +.+..|.
T Consensus 176 -------L~ieF~~~ks~y~l~d~I~G~I~f~-~s~i~Ik~iel~LiR~Et~~~~~~~~-~e~~~i~k~eImDG~p~rge 246 (341)
T 2fau_A 176 -------LHIEFEYNKSKYHLKDVIVGKIYFL-LVRIKIQHMELQLIKKEITGIGPSTT-TETETIAKYEIMDGAPVKGE 246 (341)
T ss_dssp -------EEEEEEESCSEEETTCEEEEEEEEE-EECSCEEEEEEEEEEEEEESCGGGCE-EEEEEEEEEECCCC------
T ss_pred -------EEEEEEEccccccCCCeEEEEEEEE-EeccceEEEEEEEEEEEEEcCCCCee-eEEEEEEEEEEeCCCccCCC
Confidence 3444556666666666665555555 45667889999999999997765432 34455655432 4444454
Q ss_pred ccceeeeeEecCC--CCCCCcCCCceEEEEEEEEEEEecCC
Q psy10650 354 RDDWTNQQLYVPP--LPPTNLRGCHLIKIQYDVFFIVDPKS 392 (446)
Q Consensus 354 ~~~~~~~~L~IP~--i~PT~l~~~~iI~V~Y~L~V~v~~~~ 392 (446)
.. ...|.||. ++||....|++|+|+|+|.|.+...+
T Consensus 247 ~I---Pirl~Lp~~~l~PT~~~~~~~fsV~Y~Lnlvlvde~ 284 (341)
T 2fau_A 247 SI---PIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEE 284 (341)
T ss_dssp CE---EEEEESTTTCCCCCEEEEETTEEEEEEEEEEEEETT
T ss_pred EE---EEEEEcCCCCCCCcchhcCCeEEEEEEEEEEEEeCC
Confidence 43 45789997 89996333999999999999996654
No 6
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=99.06 E-value=7e-09 Score=104.01 Aligned_cols=153 Identities=12% Similarity=0.144 Sum_probs=93.1
Q ss_pred ccCCeeeEeeeEeecCCCCCCccccCCCeeecCeEEEEeEEEecCCCCCceEEeecccEEEEEEEEEecCCCC-CccceE
Q psy10650 87 LLSPGIHSFPFKLGLPLGLPSTFLGQAPVLLSPGIHSFPFKLGLPLGLPSTFLGKHGWVQYFCKAALREPTGY-THKNQQ 165 (446)
Q Consensus 87 ~Lp~G~H~fpF~~~LP~~LPsSfeg~~g~~l~~G~~~~pf~f~LP~~lP~Sf~~~~g~IrY~i~~~i~~p~~~-d~~~~~ 165 (446)
.|++| |+|||.|++|..+|.||+|.+ |.++|-.++.|.+... .+.......+...... +..
T Consensus 102 ~L~~g-~~fpF~F~~~~~~~eSy~G~~------~~IrY~vrv~i~R~~~--------di~~~~eF~V~~~~~~p~~~--- 163 (341)
T 2fau_A 102 ELTQS-RSYDFEFMQVEKPYESYIGAN------VRLRYFLKVTIVRRLT--------DLVKEYDLIVHQLATYPDVN--- 163 (341)
T ss_dssp EECSC-EEEEEEECSCCCCSCCEECSS------EEEEEEEEEEECCSSS--------CEEEEEEEEECCCBCCCCCC---
T ss_pred ccCCC-cEEeeEeCCCCCCCcceEeeE------EEEEEEEEEEEEecCc--------ceeEEEEEEEEeCCCCCCCC---
Confidence 58999 999999999988999999999 8888988888876331 2334444444432211 111
Q ss_pred EEEEEeccccCCCCCccceeeeccccccCCCCCCCCCCCceeEeEeEeeeeecCCcEEEEEEEcccccccCceEEEEEEE
Q psy10650 166 VFIIMSPIDLNLEPPILSVFIIMSPIDLNLEPPILSQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINATV 245 (446)
Q Consensus 166 ~~~V~~~~dl~~~p~~~~~~~~~~P~~~~~~~p~~~~p~~~~~~k~~~~~c~~sG~v~l~v~lpr~gYvPGE~I~v~v~I 245 (446)
.++.++.. | ..++.. ++.+++++|.+||.|...+.+
T Consensus 164 -----~pi~~evg-----------i----------ed~L~i------------------eF~~~ks~y~l~d~I~G~I~f 199 (341)
T 2fau_A 164 -----NSIKMEVG-----------I----------EDXLHI------------------EFEYNKSKYHLKDVIVGKIYF 199 (341)
T ss_dssp -----CCEEEEEE-----------E----------TTTEEE------------------EEEESCSEEETTCEEEEEEEE
T ss_pred -----CCeEEEEe-----------c----------cccEEE------------------EEEEccccccCCCeEEEEEEE
Confidence 12222110 0 012211 234899999999999998888
Q ss_pred EcCCcceeEeeeceeeec-cccccccceeeeeEecCCceeEEEEeccceecCCCeEEEEEEEee
Q psy10650 246 YNRSKITVKSTKAALTEQ-PFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINATVYN 308 (446)
Q Consensus 246 ~N~S~k~ik~i~~~L~q~-~~~~~~~~~~~~~c~~~G~v~l~~sl~r~gY~pGE~I~i~v~I~N 308 (446)
. .|+..|+.|.++|+++ +|.+...... .-..-...++--.+-+.||.|++.+.+-.
T Consensus 200 ~-~s~i~Ik~iel~LiR~Et~~~~~~~~~------e~~~i~k~eImDG~p~rge~IPirl~Lp~ 256 (341)
T 2fau_A 200 L-LVRIKIQHMELQLIKKEITGIGPSTTT------ETETIAKYEIMDGAPVKGESIPIRLFLAG 256 (341)
T ss_dssp E-EECSCEEEEEEEEEEEEEESCGGGCEE------EEEEEEEEECCCC------CEEEEEESTT
T ss_pred E-EeccceEEEEEEEEEEEEEcCCCCeee------EEEEEEEEEEeCCCccCCCEEEEEEEcCC
Confidence 8 6889999999999997 3332211000 00111234444466788999999877653
No 7
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=98.78 E-value=2.9e-08 Score=101.16 Aligned_cols=52 Identities=27% Similarity=0.339 Sum_probs=49.5
Q ss_pred eEecCCceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEE
Q psy10650 276 ACVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQY 327 (446)
Q Consensus 276 ~c~~~G~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y 327 (446)
+|+.+|+++|++++|+.+|+|||+|+|++.|+|.|++.|+.|+++|+|.++|
T Consensus 187 f~~ssGpl~l~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v 238 (392)
T 1suj_A 187 FMLSDRPLHLEASLDKEIYYHGEPINVNVKINNTTGKIVKKIKIIVEQVTDV 238 (392)
T ss_dssp EEETTEEEEEEEEESCSEEETTCCEEEEEEEEECSSSEEEEEEEEEEEEEEE
T ss_pred eEecCCCEEEEEEeCCccccCCCEEEEEEEEECCCCCcEeEEEEEEEEEEEE
Confidence 6789999999999999999999999999999999999999999999998754
No 8
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=98.59 E-value=2.2e-07 Score=93.48 Aligned_cols=126 Identities=21% Similarity=0.327 Sum_probs=96.6
Q ss_pred EecCCceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEEEeccceeeeeEEEEeeee-cCccCCCCcc
Q psy10650 277 CVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQYLARNKVLESETRELASLT-RGKIKPGERD 355 (446)
Q Consensus 277 c~~~G~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y~a~~~~~~~~~~~V~~~~-~~~V~~g~~~ 355 (446)
|+.+|++++++++|+.+|+|||+|+|++.|+|.|+++|+.|++.|.|.++|.+..... ...+|++.+ ..+|.||++
T Consensus 207 ~~ssGpl~L~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~--y~~~Va~~E~~epV~pgst- 283 (380)
T 3ugu_A 207 FMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDY--YIKTVAAEEAQEKVPPNSS- 283 (380)
T ss_dssp TTCCCEEEEEEEESCSEEETTCCEEEEEEEEECSSSCEEEEEEEEEEEEEECSSSCCE--EEEEEEEEECSCCBCTTEE-
T ss_pred EecCCCEEEEEEeCCccCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEEEEEEEecCCe--EEEEEEEeccCCcCCCCCe-
Confidence 4589999999999999999999999999999999999999999999999998753322 234567666 458999976
Q ss_pred ceeeeeE-ecCCC----------------------CCCCc-CCC---ce--EEEEEEEEEEEecCCC-----CCCeEEEe
Q psy10650 356 DWTNQQL-YVPPL----------------------PPTNL-RGC---HL--IKIQYDVFFIVDPKSI-----EKPVKLQL 401 (446)
Q Consensus 356 ~~~~~~L-~IP~i----------------------~PT~l-~~~---~i--I~V~Y~L~V~v~~~~~-----~~~l~v~l 401 (446)
| ...+ .+|.+ +.|++ ..+ .+ |-|+|.++|.+.++++ ..++.+++
T Consensus 284 -~-~k~~~l~P~l~~n~~krglALdG~lk~edtnLASsT~~~~~~~ke~~GI~VsY~VkVkl~v~~lgg~~~~sdv~~el 361 (380)
T 3ugu_A 284 -L-TKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEV 361 (380)
T ss_dssp -E-EEEEEECCCGGGCSCCTTSCBSSCTTCTTCCBCCCCCCCTTCCGGGGSEEEEEEEEEEEEECCCTTCSSCEEEEEEE
T ss_pred -E-EeeEEEEEecccCCceeeEEecceeccCCCcccceeEecCCCCCcceEEEEEEEEEEEEEEecccCCccccceEEEe
Confidence 5 3444 55532 22221 111 11 8899999999988742 35899999
Q ss_pred cEEEEe
Q psy10650 402 PIMLAT 407 (446)
Q Consensus 402 PIiIGt 407 (446)
|+++..
T Consensus 362 Pf~Lmh 367 (380)
T 3ugu_A 362 PFRLMH 367 (380)
T ss_dssp EEEEEB
T ss_pred cccccC
Confidence 998876
No 9
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=97.47 E-value=9e-05 Score=75.81 Aligned_cols=53 Identities=30% Similarity=0.355 Sum_probs=49.3
Q ss_pred eeEecCCceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEE
Q psy10650 275 VACVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQY 327 (446)
Q Consensus 275 ~~c~~~G~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y 327 (446)
.+||.+|+++|++++|+.+|+|||+|.+++.|+|.|++.|+.++++|+|.+.+
T Consensus 189 ~fc~~sG~l~l~~sldk~~Y~pGE~I~v~v~I~N~S~k~Vk~Ikv~L~Q~~~~ 241 (393)
T 1g4m_A 189 QFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADI 241 (393)
T ss_dssp ECBSSSSCEEEEEEESCSEEETTCCEEEEEEEEECSSCCEEEEEEEEEEEEEE
T ss_pred EEEEcCCCEEEEEEECCceEcCCCEEEEEEEEEcCCCCEEeEEEEEEEEEEEE
Confidence 45688999999999999999999999999999999999999999999997643
No 10
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=97.18 E-value=0.014 Score=58.35 Aligned_cols=140 Identities=14% Similarity=0.180 Sum_probs=92.4
Q ss_pred CceEEEEEEEEcCCcceeEeeeceeeeccccccccceeeeeEecCCceeEEEEeccceecCCCeEEEEEEEeec---cce
Q psy10650 236 GETIIINATVYNRSKITVKSTKAALTEQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINATVYNR---SKI 312 (446)
Q Consensus 236 GE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~~~~~~~~~~c~~~G~v~l~~sl~r~gY~pGE~I~i~v~I~N~---S~~ 312 (446)
||.+.|.+.+++..++....++.. .|... . --.|.+||+|.=.+.|... ...
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~---~--~pvY~~GE~VsG~V~I~~~~~~k~l 65 (340)
T 2r51_A 11 GQSVEVEILLNDAESRKRAEHKTE--------------------DGKKE---K--YFLFYDGETVSGKVSLSLKNPNKRL 65 (340)
T ss_dssp --CEEEEEEETTTTTSCEEEEECT--------------------TSCEE---E--EEEEETBCCEEEEEEEEESSTTSCE
T ss_pred CCCceEEEEECCCCccceEEeecC--------------------CCcEe---e--cCcCCCCCEEEEEEEEEECCCCCee
Confidence 788888888888776644332211 12211 1 1258999999999999887 668
Q ss_pred eeeeeEEEEEEEEEEEec-cceee--eeEEEEeeeecCccCCCCccceeeeeEecCCCCCCCcCCCceEEEEEEEEEEEe
Q psy10650 313 TVKSTKAALTETIQYLAR-NKVLE--SETRELASLTRGKIKPGERDDWTNQQLYVPPLPPTNLRGCHLIKIQYDVFFIVD 389 (446)
Q Consensus 313 ~I~~i~v~Liq~v~y~a~-~~~~~--~~~~~V~~~~~~~V~~g~~~~~~~~~L~IP~i~PT~l~~~~iI~V~Y~L~V~v~ 389 (446)
..++|++.+...+...-. +.... .....++ ..+.+.+|.+ | ...|.+|...|+++ .+..+.|.|.|+|.++
T Consensus 66 ~h~GIki~~~G~~e~~~~~~~~~~f~~~~~eL~--~pG~L~~G~~--f-pF~F~lp~~l~eSy-~G~~g~IrY~vkv~i~ 139 (340)
T 2r51_A 66 EHQGIKIEFIGQIELYYDRGNHHEFVSLVKDLA--RPGEITQSQA--F-DFEFTHVEKPYESY-TGQNVKLRYFLRATIS 139 (340)
T ss_dssp EESCEEEEEEEEEEEGGGTTCCEEEEEEEEEEE--CSEEECSCEE--E-EEEECSBCCCSCCE-ECSSEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEEEEEecCCCcEEEEEEEEEec--CCCccCCCcE--E-eeEeCCCCCCCcCe-EeeeEEEEEEEEEEEE
Confidence 889999999986654222 11110 1111121 1235666655 6 77888898666554 6888999999999998
Q ss_pred cCCCCCCeEEEecEEEEee
Q psy10650 390 PKSIEKPVKLQLPIMLATY 408 (446)
Q Consensus 390 ~~~~~~~l~v~lPIiIGtv 408 (446)
-++. ++....++++-+.
T Consensus 140 Rp~~--di~~~~eF~V~~~ 156 (340)
T 2r51_A 140 RRLN--DVVKEMDIVVHTL 156 (340)
T ss_dssp CSSC--CEEEEEEEEEECC
T ss_pred ecCC--CceEEEEEEEEeC
Confidence 8864 8999999988874
No 11
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=88.61 E-value=1.6 Score=34.97 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=25.3
Q ss_pred EEEEEcccccccCceEEEEEEEEcCCccee
Q psy10650 224 CRVSLDRGGYVPGETIIINATVYNRSKITV 253 (446)
Q Consensus 224 l~v~lpr~gYvPGE~I~v~v~I~N~S~k~i 253 (446)
+-+..||..|.|||+|.+.+-+-|...+.+
T Consensus 4 ~fi~tDr~iYrPGetV~~~~~~~~~~~~p~ 33 (102)
T 2p9r_A 4 VFVQTDKSIYKPGQTVKFRVVSMDENFHPL 33 (102)
T ss_dssp EEEEESCSEECTTCEEEEEEEEECGGGCBC
T ss_pred EEEECCCcccCCCCEEEEEEEEECCCCcCC
Confidence 568899999999999999999888765544
No 12
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=81.53 E-value=5.2 Score=33.70 Aligned_cols=86 Identities=12% Similarity=0.020 Sum_probs=56.7
Q ss_pred cCCcEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeeeccccccccceeeeeEecCCceeEEEEeccceecCC
Q psy10650 218 SSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPG 297 (446)
Q Consensus 218 ~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~~~~~~~~~~c~~~G~v~l~~sl~r~gY~pG 297 (446)
..|.|.+++.-+. +|+.+.+.+.|.|.++..+.--.-+=++--|.-....--.+|-++.|.+-.. .+....+.||
T Consensus 3 ~~~~l~~~v~~~~----~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQ-a~~~~tl~pG 77 (120)
T 3isy_A 3 ENQEVVLSIDAIQ----EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQ-AFQNLTLESG 77 (120)
T ss_dssp -CCSEEEEEEEEE----CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCC-CCEEEEECTT
T ss_pred cccEEEEEEeecc----CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhh-hhceEEECCC
Confidence 4577888888777 8899999999999999876533222222011100001124566677777777 4556678899
Q ss_pred CeEEEEEEEee
Q psy10650 298 ETIIINATVYN 308 (446)
Q Consensus 298 E~I~i~v~I~N 308 (446)
|.......+.+
T Consensus 78 E~~~f~~~w~~ 88 (120)
T 3isy_A 78 ETYDFSDVWKE 88 (120)
T ss_dssp CEEEEEEEESS
T ss_pred CEEEEEEEeCC
Confidence 99999998884
No 13
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=76.19 E-value=4.8 Score=32.12 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=25.4
Q ss_pred EEEEeccceecCCCeEEEEEEEeeccceeee
Q psy10650 285 CRVSLDRGGYVPGETIIINATVYNRSKITVK 315 (446)
Q Consensus 285 l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~ 315 (446)
+-+++||..|.|||+|.+.+.+.|...+.+.
T Consensus 4 ~fi~tDr~iYrPGetV~~~~~~~~~~~~p~~ 34 (102)
T 2p9r_A 4 VFVQTDKSIYKPGQTVKFRVVSMDENFHPLN 34 (102)
T ss_dssp EEEEESCSEECTTCEEEEEEEEECGGGCBCC
T ss_pred EEEECCCcccCCCCEEEEEEEEECCCCcCCC
Confidence 4578999999999999999998876555443
No 14
>1so9_A Cytochrome C oxidase assembly protein CTAG; immunoglobulin-like fold, copper protein, structural proteomics in europe, spine; NMR {Sinorhizobium meliloti} SCOP: b.146.1.1 PDB: 1sp0_A
Probab=73.19 E-value=3.2 Score=36.88 Aligned_cols=59 Identities=19% Similarity=0.223 Sum_probs=42.2
Q ss_pred ccCceEEEEEEEEcCCcceeEeeeceeeeccccc-cccceeeeeEecCCceeEEEEeccceecCCCeEEEEE
Q psy10650 234 VPGETIIINATVYNRSKITVKSTKAALTEQPFDC-EIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIINA 304 (446)
Q Consensus 234 vPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~-~~~~~~~~~c~~~G~v~l~~sl~r~gY~pGE~I~i~v 304 (446)
.|||+..+.-.+.|.|.+.|....+==+ .+..+ ..=.++.|+|+ ..+-..|||++.+=+
T Consensus 59 ~pGE~~~~~y~a~N~sd~~i~G~A~ynV-~P~~a~~YF~KieCFCF-----------~eQ~L~pgE~~~MPV 118 (164)
T 1so9_A 59 RIGETVQIMYRAKNLASTPTTGQATFNV-TPMAAGAYFNKVQCFCF-----------TETTLEPGEEMEMPV 118 (164)
T ss_dssp CTTCCCCEEEEEEECSSSCEECCCEEEE-CSSSCSTTBTTSCCSSC-----------SCCEECTTCEEEEEE
T ss_pred cCCCeEEEEEEEECCCCCcEEEEECcee-CHHHHhhhccceeeEcc-----------cCcccCCCCeEeeeE
Confidence 6999999999999999999988654332 22222 22235778887 456778999887765
No 15
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=71.71 E-value=52 Score=38.12 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=29.3
Q ss_pred eecCCcEEEEEEEcccccccCceEEEEEEEEcCCccee
Q psy10650 216 CVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITV 253 (446)
Q Consensus 216 c~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~i 253 (446)
.+.+-...+-++.||..|.|||+|.+.+-+-|...+.+
T Consensus 94 ~~~~~~~~~fi~TDr~iYrPGqtV~~r~~~~~~~~~p~ 131 (1325)
T 2pn5_A 94 VYLSKSISGLIQVDKPVFKPGDTVNFRVIVLDTELKPP 131 (1325)
T ss_dssp EECSCSEEEEEEESCSEECTTCEEEEEEEEEETTSSCC
T ss_pred EEEcccccEEEecCCCccCCCCEEEEEEEEecCCcccc
Confidence 35566667889999999999999988777766655443
No 16
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=69.86 E-value=33 Score=36.43 Aligned_cols=35 Identities=11% Similarity=-0.099 Sum_probs=27.3
Q ss_pred ceeEEEEeccceecCC--CeEEEEEEEeeccceeeee
Q psy10650 282 PVLCRVSLDRGGYVPG--ETIIINATVYNRSKITVKS 316 (446)
Q Consensus 282 ~v~l~~sl~r~gY~pG--E~I~i~v~I~N~S~~~I~~ 316 (446)
...+.+..++..|..| +.+.+.+........++.+
T Consensus 209 ~feV~i~~~~~~~~~~~~~~~~v~v~a~Y~~G~Pv~G 245 (645)
T 2hr0_A 209 SFEVIVEPTEKFYYIYNEKGLEVTITARFLYGKKVEG 245 (645)
T ss_dssp CCEEEEEESSSSEETTCTTCEEEEEEEECTTSCBCCE
T ss_pred eEEEEEEcCceeEecCCCcEEEEEEEEEEcCCCeeee
Confidence 4456666777788899 9999999888877777765
No 17
>3l9o_A ATP-dependent RNA helicase DOB1; REC-A fold, winged-helix-turn-helix, antiparallel-coiled-COI domain, ATP-binding, helicase, hydrolase; 3.39A {Saccharomyces cerevisiae}
Probab=68.48 E-value=1 Score=51.64 Aligned_cols=8 Identities=25% Similarity=0.451 Sum_probs=4.7
Q ss_pred CCCceEEE
Q psy10650 373 RGCHLIKI 380 (446)
Q Consensus 373 ~~~~iI~V 380 (446)
+.+++|.|
T Consensus 710 ~~G~~v~~ 717 (1108)
T 3l9o_A 710 QPGRLVEI 717 (1108)
T ss_dssp CTTEEEEE
T ss_pred CCCCEEEE
Confidence 45666655
No 18
>2icn_B Prolactin-inducible protein; beta-pleated sheet, complex, seminal fluid; HET: NAG BMA MAN P6G; 3.23A {Homo sapiens} PDB: 3es6_B*
Probab=63.65 E-value=37 Score=28.34 Aligned_cols=45 Identities=13% Similarity=0.188 Sum_probs=33.5
Q ss_pred cEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeeec-cccc
Q psy10650 221 PVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQ-PFDC 267 (446)
Q Consensus 221 ~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~-~~~~ 267 (446)
|+.++++||.+. +.||.+.+.+.|-|.=+..|. |++.|... .|.+
T Consensus 7 PffveltlPySv-~rgE~f~lkatVfNyL~~Ci~-V~v~L~~S~~~~~ 52 (118)
T 2icn_B 7 IIIKNFDIPKSV-RPNDEVTAVLAVQTELKECMV-VKTYLISSIPLQG 52 (118)
T ss_dssp CSEECCCCCSEE-CSSCCEEEEEEEEECCSSCEE-EEEEEEESSCCCG
T ss_pred CEEEEEeCCCcc-cCCCEEEEEEEEEeccCcCEE-EEEEEcCCCCeEe
Confidence 344778888764 899999999999999887764 66666654 3443
No 19
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=62.49 E-value=28 Score=34.62 Aligned_cols=86 Identities=20% Similarity=0.208 Sum_probs=45.0
Q ss_pred CCcEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeeecccccccc--ceeeeeE--ecCCceeEEEEecccee
Q psy10650 219 SGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQPFDCEIE--HKLGVAC--VSSGPVLCRVSLDRGGY 294 (446)
Q Consensus 219 sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~~~~--~~~~~~c--~~~G~v~l~~sl~r~gY 294 (446)
.++|.+++ .+.+-.+||-++.++++|+|.++..|+-=.+.-.-..|..--. ....... ...+- |++ -|....
T Consensus 247 ~~~V~~~v-~~A~Y~vpgR~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~g--L~v-sd~~pI 322 (382)
T 1yew_A 247 APTVSVKV-EDATYRVPGRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDG--LSV-SDNSPL 322 (382)
T ss_dssp CCSEEEEE-EEEEEESSCSEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTC--EEE-SCCSCB
T ss_pred CCceEEEe-eccEEecCCcEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCC--cee-CCCCCc
Confidence 44444443 2344459999999999999999987653222211111211000 0000000 00001 222 356668
Q ss_pred cCCCeEEEEEEEee
Q psy10650 295 VPGETIIINATVYN 308 (446)
Q Consensus 295 ~pGE~I~i~v~I~N 308 (446)
.|||+-.+++++.-
T Consensus 323 ~PGETr~~~v~a~d 336 (382)
T 1yew_A 323 APGETRTVDVTASD 336 (382)
T ss_dssp CTTCEEEEEEEEEC
T ss_pred CCCceeEEEEEeeh
Confidence 99999988887754
No 20
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=59.37 E-value=2.3e+02 Score=32.66 Aligned_cols=35 Identities=14% Similarity=0.258 Sum_probs=28.0
Q ss_pred CceeEEEEeccceecCCCeEEEEEEEeeccceeee
Q psy10650 281 GPVLCRVSLDRGGYVPGETIIINATVYNRSKITVK 315 (446)
Q Consensus 281 G~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~ 315 (446)
-...+-+++||..|.|||+|.+.+.+.|...+.+.
T Consensus 98 ~~~~~fi~TDr~iYrPGqtV~~r~~~~~~~~~p~~ 132 (1325)
T 2pn5_A 98 KSISGLIQVDKPVFKPGDTVNFRVIVLDTELKPPA 132 (1325)
T ss_dssp CSEEEEEEESCSEECTTCEEEEEEEEEETTSSCCS
T ss_pred ccccEEEecCCCccCCCCEEEEEEEEecCCccccc
Confidence 34567789999999999999999998876555443
No 21
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=55.95 E-value=74 Score=29.67 Aligned_cols=42 Identities=14% Similarity=0.112 Sum_probs=32.6
Q ss_pred CCcEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeee
Q psy10650 219 SGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTE 262 (446)
Q Consensus 219 sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q 262 (446)
.-++.+.+.||+. .+.||.+.+.+.|-|.....++ +.+.|..
T Consensus 79 ~kpffv~~~LP~s-v~rGE~~~l~~~V~Ny~~~~~~-v~V~l~~ 120 (252)
T 3hrz_B 79 MKVFFIDLQMPYS-VVKNEQVEIRAILHNYVNEDIY-VRVELLY 120 (252)
T ss_dssp CCSEEEEECCCSC-EETTCCEEEEEEEEECSSSCEE-EEEEECC
T ss_pred ECCEEEEcCCCcE-EeeCCEEEEEEEEEcccCceEE-EEEEEEc
Confidence 3456788999987 5689999999999999988765 4455543
No 22
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=49.33 E-value=89 Score=25.85 Aligned_cols=41 Identities=12% Similarity=0.155 Sum_probs=30.1
Q ss_pred cEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeeec
Q psy10650 221 PVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQ 263 (446)
Q Consensus 221 ~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~ 263 (446)
++.+.++||.+ .+-||.+.+.+.|.|.-...+. +++.|...
T Consensus 7 ~~~~~l~lPys-v~rgE~~~~~~~V~nyl~~~~~-v~v~L~~s 47 (118)
T 3es6_B 7 IIIKNFDIPKS-VRPNDEVTAVLAVQTELKECMV-VKTYLISS 47 (118)
T ss_dssp CCEECCCCCSE-ECSSCCEEEEEEEEECCSSCEE-EEEEEEES
T ss_pred eEEEEeeCCce-EecCCEEEEEEEEEecccceEE-EEEEecCC
Confidence 34567777754 4789999999999999887654 55566543
No 23
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=49.19 E-value=30 Score=34.82 Aligned_cols=79 Identities=23% Similarity=0.260 Sum_probs=43.7
Q ss_pred EEEEEccccc-ccCceEEEEEEEEcCCcceeEeeeceeeeccccc-----cccceeeeeEecCCceeEEEEeccceecCC
Q psy10650 224 CRVSLDRGGY-VPGETIIINATVYNRSKITVKSTKAALTEQPFDC-----EIEHKLGVACVSSGPVLCRVSLDRGGYVPG 297 (446)
Q Consensus 224 l~v~lpr~gY-vPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~-----~~~~~~~~~c~~~G~v~l~~sl~r~gY~pG 297 (446)
+++.+...-| +||-++.++++|+|++...++-=.+.-.-..|.. .....-.-+--..| |+ -|. ...||
T Consensus 284 V~~~v~~A~Y~vpgR~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G---L~--s~~-pI~PG 357 (419)
T 3rfr_A 284 VTTELNGGVYKVPGRELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG---LS--NDD-VIAPG 357 (419)
T ss_dssp CEEEEEEEEEESSSSEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC---CC--CCC-CBCTT
T ss_pred eEEEEeceEEecCCcEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC---CC--CCC-CcCCC
Confidence 3444555555 9999999999999999987643222111111110 00000000000122 33 455 88999
Q ss_pred CeEEEEEEEee
Q psy10650 298 ETIIINATVYN 308 (446)
Q Consensus 298 E~I~i~v~I~N 308 (446)
|+-.+++++.-
T Consensus 358 ETrt~~V~a~d 368 (419)
T 3rfr_A 358 ESKEIVVKIQD 368 (419)
T ss_dssp CEEEEEEEEEC
T ss_pred cceEEEEEeeh
Confidence 99999888754
No 24
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=40.26 E-value=1.4e+02 Score=23.86 Aligned_cols=66 Identities=18% Similarity=0.144 Sum_probs=48.2
Q ss_pred EEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeeeccccccccceeeeeEecCCceeEEEEeccceecCCCeEEEE
Q psy10650 224 CRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQPFDCEIEHKLGVACVSSGPVLCRVSLDRGGYVPGETIIIN 303 (446)
Q Consensus 224 l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~~~~~~~~~~c~~~G~v~l~~sl~r~gY~pGE~I~i~ 303 (446)
+.++++-.. +-|+.+.+.+.+.|-=...++...+.+ -++|.+.- ..++-....||+++.++
T Consensus 8 i~I~v~g~~-~v~~~l~v~vsf~NPL~~~L~~c~~~v-----------------EG~GL~~~-~~~~~~~v~pg~~~~~~ 68 (102)
T 2xzz_A 8 LSLTLLGAA-VVGQECEVQIVFKNPLPVTLTNVVFRL-----------------EGSGLQRP-KILNVGDIGGNETVTLR 68 (102)
T ss_dssp EEEEESSCC-CSSSCEEEEEEEECCSSSCBCSEEEEE-----------------EETTTEEE-EEEEECCBCTTCEEEEE
T ss_pred EEEEECCCc-ccCCeEEEEEEEECCCCCcccCEEEEE-----------------ECCCCCcc-eEEEcCcCCCCCEEEEE
Confidence 556666665 459999999999999888877654443 23666665 55555667799999888
Q ss_pred EEEee
Q psy10650 304 ATVYN 308 (446)
Q Consensus 304 v~I~N 308 (446)
..+..
T Consensus 69 ~~~~P 73 (102)
T 2xzz_A 69 QSFVP 73 (102)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 88766
No 25
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=37.78 E-value=85 Score=26.07 Aligned_cols=51 Identities=18% Similarity=0.168 Sum_probs=35.5
Q ss_pred cCccCCCCccceeeeeEecCCCCCCCcCCCceEEEEEEEEEEEecCCCCCCeEEEecEEEE
Q psy10650 346 RGKIKPGERDDWTNQQLYVPPLPPTNLRGCHLIKIQYDVFFIVDPKSIEKPVKLQLPIMLA 406 (446)
Q Consensus 346 ~~~V~~g~~~~~~~~~L~IP~i~PT~l~~~~iI~V~Y~L~V~v~~~~~~~~l~v~lPIiIG 406 (446)
.+++.+|+..++ ...|.|++..|.. +|.+++.+.-..-..-..+.+|+.|-
T Consensus 79 ~CPl~~G~~~~y-~~~lpV~~~~P~~---------~~~v~~~L~d~~~~~l~C~~~~~~I~ 129 (130)
T 1nep_A 79 RCPIEKDKTYNY-VNKLPVKNEYPSI---------KVVVEWELTDDKNQRFFCWQIPIEVE 129 (130)
T ss_dssp CSSBCTTCEEEE-EEEEECCTTSCSS---------EEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred cCcccCCcEEEE-EEEeEecccCCCc---------cEEEEEEEEcCCCCEEEEEEEeEEEE
Confidence 578999999999 6788888877763 36666666433212236788888774
No 26
>2bm3_A Type 2 cohesin, scaffolding dockerin binding protein A; cellulosome, nuclear protein; 1.8A {Clostridium thermocellum} SCOP: b.2.2.2
Probab=36.74 E-value=37 Score=29.83 Aligned_cols=41 Identities=15% Similarity=0.113 Sum_probs=31.2
Q ss_pred cCCcEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeec
Q psy10650 218 SSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKA 258 (446)
Q Consensus 218 ~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~ 258 (446)
.++.-.+.+.|||+.---||.|..++.|+|-++-.=-.+-+
T Consensus 3 a~~~~~I~~~lDKT~~~VGdII~Atv~vnnI~nfAGYQvNI 43 (166)
T 2bm3_A 3 SDKASSIELKFDRNKGEVGDILIGTVRINNIKNFAGFQVNI 43 (166)
T ss_dssp --CCCEEEEEESCSCCCTTCEEEEEEEEESCTTEEEEEEEE
T ss_pred cCCCCeEEEEecCcceeeCCEEEEEEEEcccccccceEEEE
Confidence 34455688999999999999999999999988654333333
No 27
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=35.99 E-value=1.6e+02 Score=31.23 Aligned_cols=94 Identities=17% Similarity=0.165 Sum_probs=54.0
Q ss_pred EEEEEEcccccccCceEEEEEEEEc----------------CCcceeEeeeceee-eccccccccceeeee---------
Q psy10650 223 LCRVSLDRGGYVPGETIIINATVYN----------------RSKITVKSTKAALT-EQPFDCEIEHKLGVA--------- 276 (446)
Q Consensus 223 ~l~v~lpr~gYvPGE~I~v~v~I~N----------------~S~k~ik~i~~~L~-q~~~~~~~~~~~~~~--------- 276 (446)
.+-++.||..|.|||+|.+.+-+-| -.+..|.+..+... +..|.-...-..|.|
T Consensus 105 ~~fi~TDr~iYrPGqtV~~r~i~~d~~~~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~~~ 184 (627)
T 3hrz_A 105 FLFIQTDKGIYTPGSPVLYRVFSMDHNTSKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEHS 184 (627)
T ss_dssp CEEEEESCSEECTTCEECEEEEESCC-------CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEETTC
T ss_pred cEEEECCCCccCCCCEEEEEEEEECCCCcccCccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEECCC
Confidence 3567899999999999886655444 44444443222110 000100000012222
Q ss_pred -----------EecCCceeEEEEeccceec-C-CCeEEEEEEEeeccceeeee
Q psy10650 277 -----------CVSSGPVLCRVSLDRGGYV-P-GETIIINATVYNRSKITVKS 316 (446)
Q Consensus 277 -----------c~~~G~v~l~~sl~r~gY~-p-GE~I~i~v~I~N~S~~~I~~ 316 (446)
-+-.-...+.+..++..|. . ||.+.+.+........++.+
T Consensus 185 ~~~~~~~F~Veeyv~P~feV~~~~~~~~~~~~~~~~~~~~v~a~y~~G~Pv~G 237 (627)
T 3hrz_A 185 PENYTAYFDVRKYVLPSFEVRLQPSEKFFYIDGNENFHVSITARYLYGEEVEG 237 (627)
T ss_dssp SCCEEEEEEECCCCCCSEEEEEEESSSEEETTCCCCEEEEEEEEETTSCBCCE
T ss_pred ceEEEEEEEEeEEECCcEEEEEecCcceEEecCCCEEEEEEEEEECCCCEecc
Confidence 1222345667777777763 4 99999999998888887765
No 28
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=34.02 E-value=35 Score=36.52 Aligned_cols=28 Identities=25% Similarity=0.482 Sum_probs=25.0
Q ss_pred EEEEEcccccccCceEEEEEEEEcCCcc
Q psy10650 224 CRVSLDRGGYVPGETIIINATVYNRSKI 251 (446)
Q Consensus 224 l~v~lpr~gYvPGE~I~v~v~I~N~S~k 251 (446)
..|..||..|.|||.|.+++++.|.+..
T Consensus 9 ~~v~tDKA~Y~PGe~V~l~~~l~n~t~~ 36 (643)
T 3vmn_A 9 INLTTDKAVYQAGEAVHLNLTLNNTTSL 36 (643)
T ss_dssp CCCEESCSSBCTTSCEEEECEEECCSSS
T ss_pred eeeeccccccCCCCeEEEEEEEecccCc
Confidence 4577899999999999999999998765
No 29
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=31.16 E-value=48 Score=35.52 Aligned_cols=28 Identities=25% Similarity=0.482 Sum_probs=24.1
Q ss_pred EEEEeccceecCCCeEEEEEEEeeccce
Q psy10650 285 CRVSLDRGGYVPGETIIINATVYNRSKI 312 (446)
Q Consensus 285 l~~sl~r~gY~pGE~I~i~v~I~N~S~~ 312 (446)
..+.+|+..|.|||.|.+++.+.|....
T Consensus 9 ~~v~tDKA~Y~PGe~V~l~~~l~n~t~~ 36 (643)
T 3vmn_A 9 INLTTDKAVYQAGEAVHLNLTLNNTTSL 36 (643)
T ss_dssp CCCEESCSSBCTTSCEEEECEEECCSSS
T ss_pred eeeeccccccCCCCeEEEEEEEecccCc
Confidence 3567899999999999999999996554
No 30
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=29.89 E-value=2.6e+02 Score=25.80 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=31.4
Q ss_pred ceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEE
Q psy10650 282 PVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTE 323 (446)
Q Consensus 282 ~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq 323 (446)
+..+...+|++. ..||.+.|.+.|.|.....++ +.+.|..
T Consensus 81 pffv~~~LP~sv-~rGE~~~l~~~V~Ny~~~~~~-v~V~l~~ 120 (252)
T 3hrz_B 81 VFFIDLQMPYSV-VKNEQVEIRAILHNYVNEDIY-VRVELLY 120 (252)
T ss_dssp SEEEEECCCSCE-ETTCCEEEEEEEEECSSSCEE-EEEEECC
T ss_pred CEEEEcCCCcEE-eeCCEEEEEEEEEcccCceEE-EEEEEEc
Confidence 556778899884 689999999999999887764 5665553
No 31
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=28.10 E-value=1.1e+02 Score=32.07 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=25.0
Q ss_pred EEEEEEcccccccCceEEEEEEEEcCCccee
Q psy10650 223 LCRVSLDRGGYVPGETIIINATVYNRSKITV 253 (446)
Q Consensus 223 ~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~i 253 (446)
.+-++.||..|.|||+|.+.+-+-|..-+..
T Consensus 121 ~vFIqTDr~iYrPGqtV~~r~i~~d~~~~p~ 151 (656)
T 4fxk_A 121 HLFLQTDQPIYNPGQRVRYRVFALDQKMRPS 151 (656)
T ss_dssp EEEEEESCSEECTTCEEEEEEEEECSSSSBC
T ss_pred cEEEECCCCCcCCCCEEEEEEEEECCccCcC
Confidence 4568899999999999999988777655443
No 32
>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2
Probab=27.17 E-value=13 Score=38.39 Aligned_cols=14 Identities=29% Similarity=0.764 Sum_probs=6.3
Q ss_pred ccccCceEEEEEEEEc
Q psy10650 232 GYVPGETIIINATVYN 247 (446)
Q Consensus 232 gYvPGE~I~v~v~I~N 247 (446)
||+.| ||+++.|.+
T Consensus 224 gFIsg--iP~~irv~~ 237 (496)
T 1rxt_A 224 GFISA--IPANIHIYD 237 (496)
T ss_dssp EEECC--EECCCCCSS
T ss_pred EEEee--eEEEEEEcc
Confidence 45554 444444433
No 33
>1kyf_A Alpha-adaptin C; protein-peptide complex, endocytosis, endocytosis/exocytosis complex; 1.22A {Mus musculus} SCOP: b.1.10.1 d.105.1.1 PDB: 1ky7_A 1kyd_A 1ky6_A 1kyu_A 1qtp_A 1qts_A 2vj0_A 1w80_A 1b9k_A
Probab=27.04 E-value=2.2e+02 Score=26.32 Aligned_cols=108 Identities=10% Similarity=0.059 Sum_probs=62.0
Q ss_pred ecCCceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEEEeccceeeeeEEEEe-eeecCccCCCCccc
Q psy10650 278 VSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQYLARNKVLESETRELA-SLTRGKIKPGERDD 356 (446)
Q Consensus 278 ~~~G~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y~a~~~~~~~~~~~V~-~~~~~~V~~g~~~~ 356 (446)
+.+..+++.+..... |..-.+.+.+.|.++..+..+.+.+... ..... .-.+. ......|.++....
T Consensus 26 yEd~~iQIg~kse~~----~~~gri~l~~gNKs~~~l~~f~~~i~~~-----~~~~~---~l~~~~~~~~~~I~~~~q~q 93 (247)
T 1kyf_A 26 FENQLLQIGLKSEFR----QNLGRMFIFYGNKTSTQFLNFTPTLICA-----DDLQT---NLNLQTKPVDPTVDGGAQVQ 93 (247)
T ss_dssp EECSSEEEEEEEEEE----TTEEEEEEEEEECSSSCBEEEEEEEECC-----HHHHH---HEEEEECCCCSCBCTTCEEE
T ss_pred EECCCEEEEEEEEEe----CCeEEEEEEEEcCCCCceeeEEEEEecC-----cccCC---CeeEecCCCCceeCCCcEEE
Confidence 456677777765532 4466888999999999998888866531 00000 00010 11123466766443
Q ss_pred eeeeeEecCCCCCCCcCCCceEEEEEEEEEEEecCCCCCCeEEEecEEEEee
Q psy10650 357 WTNQQLYVPPLPPTNLRGCHLIKIQYDVFFIVDPKSIEKPVKLQLPIMLATY 408 (446)
Q Consensus 357 ~~~~~L~IP~i~PT~l~~~~iI~V~Y~L~V~v~~~~~~~~l~v~lPIiIGtv 408 (446)
. ...+.+ ..|- ...++|.|+|.+. +....+.+.|||+|...
T Consensus 94 q-~i~v~~--~~~f--~~~P~l~isf~~~------g~~~~~~LkLPi~l~KF 134 (247)
T 1kyf_A 94 Q-VVNIEC--ISDF--TEAPVLNIQFRYG------GTFQNVSVKLPITLNKF 134 (247)
T ss_dssp E-EEEEEE--CSCC--CCCCEEEEEEEET------TEEEEEEEECCCCGGGG
T ss_pred E-EEEEEE--cccc--CCCCEEEEEEEEC------CeeeEEEEecCcEEEEe
Confidence 2 344444 3343 3788999999654 22245677788766543
No 34
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=26.48 E-value=2.1e+02 Score=34.12 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=27.2
Q ss_pred eecCCcEEEEEEEcccccccCceEEEEEEEEcCCcc
Q psy10650 216 CVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKI 251 (446)
Q Consensus 216 c~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k 251 (446)
.+.+-...+-++.||..|.|||+|.+.+-+-|...+
T Consensus 118 ~~~~~~~~~fiqTDR~iYrPGqtV~~r~i~~d~~~~ 153 (1676)
T 3cu7_A 118 PITYDNGFLFIHTDKPVYTPDQSVKVRVYSLNDDLK 153 (1676)
T ss_dssp CEECCCSEEEEEESCSEECTTCEECEEEEEECTTCS
T ss_pred EEEcCCCcEEEECCCCccCCCCEEEEEEEEECCCCc
Confidence 344555567799999999999999887776665443
No 35
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=25.62 E-value=1.1e+02 Score=25.79 Aligned_cols=65 Identities=25% Similarity=0.362 Sum_probs=43.3
Q ss_pred EEEcccccccCceEEEEEEEEcCCcceeEeeeceeeecccccccccee-eeeEecCCceeEEEEeccceecCCCeEEEEE
Q psy10650 226 VSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQPFDCEIEHKL-GVACVSSGPVLCRVSLDRGGYVPGETIIINA 304 (446)
Q Consensus 226 v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~~~~~~~-~~~c~~~G~v~l~~sl~r~gY~pGE~I~i~v 304 (446)
+++|+....|||...|+.-|..-.+.+|..+.+-.... ++.+ |.| ..|.+ +.+-.|||-+++..
T Consensus 53 isiDk~vL~PGESA~it~IvKDid~nPIn~v~i~~~~~------~~~~~g~W--d~g~~-------Kkg~~PGeY~q~iT 117 (146)
T 2lv4_A 53 MSIDKSVLSPGESATITTIVKDIDGNPVNEVHINKTVA------RENLKGLW--DYGPL-------KKENVPGKYTQVIT 117 (146)
T ss_dssp EECCCCCBCTTCEEEEEEECBBTTSCBCCCCCCBCCEE------CSCSSSEE--EECCC-------EECSSSSEEEEEEE
T ss_pred EecCccccCCCcceEEEEEEEeCCCCcccceeeeeeee------ccccccce--eecce-------ecCCCCcceEEEEE
Confidence 78999999999999999988877777777665544221 1122 333 24444 46677888765544
Q ss_pred E
Q psy10650 305 T 305 (446)
Q Consensus 305 ~ 305 (446)
.
T Consensus 118 Y 118 (146)
T 2lv4_A 118 Y 118 (146)
T ss_dssp E
T ss_pred E
Confidence 3
No 36
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=25.53 E-value=1.3e+02 Score=35.80 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=0.0
Q ss_pred eeecCCcEEEEEEEcccccccCceE----------------EEEEEEEcCCcceeEeeecee------eeccccccccce
Q psy10650 215 ACVSSGPVLCRVSLDRGGYVPGETI----------------IINATVYNRSKITVKSTKAAL------TEQPFDCEIEHK 272 (446)
Q Consensus 215 ~c~~sG~v~l~v~lpr~gYvPGE~I----------------~v~v~I~N~S~k~ik~i~~~L------~q~~~~~~~~~~ 272 (446)
..+..-.-.+-++.||..|.|||+| ++++.|.|..+..|....+.+ .+..|.-...-.
T Consensus 120 v~~~~~~~~~fiqTDR~iYrPGqtV~~r~i~~d~~~~p~~~~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~ 199 (1661)
T 2b39_A 120 VLISLQSGYLFIQTDKTIYTPGSTVLYRVFTVDHKLLPVGQTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVN 199 (1661)
T ss_dssp EEECCCCCEEEEEESCSEECTTSEEEEEEEEECTTSCCCCCCEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCC
T ss_pred EEEecCCCcEEEecCCCccCCCCEEEEEEEEECCCCcccCceEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCcc
Q ss_pred eeeeEecCC---------------------ceeEEEEeccceecCC--CeEEEEEEEeeccceeeee
Q psy10650 273 LGVACVSSG---------------------PVLCRVSLDRGGYVPG--ETIIINATVYNRSKITVKS 316 (446)
Q Consensus 273 ~~~~c~~~G---------------------~v~l~~sl~r~gY~pG--E~I~i~v~I~N~S~~~I~~ 316 (446)
.|-|-+.-. ...+.+..+...|..| +.+.+++........++.+
T Consensus 200 ~G~w~I~v~~~~~~~~~~~~~F~VeEYvlP~feV~i~~~~~~~~~~~~~~~~v~v~a~Y~~G~Pv~G 266 (1661)
T 2b39_A 200 MGVWKIKAYYEDSPQQVFSAEFEVKEYVLPSFEVQLEPEEKFYYIDDPDGLKVNIIARFLYGEQVDG 266 (1661)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECCCCCCSBCCEEECSSSSCCSSCSSCCCEEEECBBSSSCBCCE
T ss_pred ccceEEEEEeecCCCceEEEEEEEEEccCCcEEEEEEcCcceEecCCCcEEEEEEEEEEcCCCceee
No 37
>3mnm_A ADP-ribosylation factor-binding protein GGA2; IG-like, beta sandwich, protein transport; HET: MLY; 1.73A {Saccharomyces cerevisiae}
Probab=24.88 E-value=2.9e+02 Score=22.71 Aligned_cols=95 Identities=13% Similarity=0.093 Sum_probs=56.5
Q ss_pred eecCCcEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeeeccccccccceeeeeEecCCceeEEEEeccce-e
Q psy10650 216 CVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQPFDCEIEHKLGVACVSSGPVLCRVSLDRGG-Y 294 (446)
Q Consensus 216 c~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~~~~~~~~~~c~~~G~v~l~~sl~r~g-Y 294 (446)
.+.+.-|.+.+.+-+.. || .+.|.+.+.|.|..+|..+.+...= +..++|++.-+..- .
T Consensus 13 ~~~~~~l~I~~~~~~~~--~~-~~~i~~~fsN~s~~~it~f~fqaAV-----------------PKs~kL~L~p~Sg~~L 72 (123)
T 3mnm_A 13 VNQSPNLKIEFEISRES--NS-VIRIXSFFTNLSSSPISNLVFLLAV-----------------PKSMSLXLQPQSSNFM 72 (123)
T ss_dssp EEECSSEEEEEEEEECS--SS-CEEEEEEEEECSSSCEEEEEEEEEC-----------------CTTSEEEECCCSCSCB
T ss_pred EEeCCCEEEEEEEEeCC--CC-eEEEEEEEecCCCCccccEEEEEec-----------------CcccEEEeECCCcCcc
Confidence 34666788888888765 55 6889999999999999987655431 23344555444332 3
Q ss_pred cCC--CeEEEEEEEeeccceeeeeeEEEEEEEEEEEeccc
Q psy10650 295 VPG--ETIIINATVYNRSKITVKSTKAALTETIQYLARNK 332 (446)
Q Consensus 295 ~pG--E~I~i~v~I~N~S~~~I~~i~v~Liq~v~y~a~~~ 332 (446)
.|+ ..|.=.+.|.|..+..-..++ |.=.+.|..++.
T Consensus 73 ~p~~~~~itQ~~~I~n~~~~~~~~lk--lR~klsY~~~g~ 110 (123)
T 3mnm_A 73 IGNAKDGISQEGTIENAPANPSKALX--VKWKVNYSVNST 110 (123)
T ss_dssp CTTCTTCEEEEEEEESCCCC---CCE--EEEEEEEEETTE
T ss_pred CCCCCCCEEEEEEEecCCCCCCCCEE--EEEEEEEEECCe
Confidence 454 566666777764321112222 333467776654
No 38
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=24.76 E-value=3.1e+02 Score=30.35 Aligned_cols=41 Identities=22% Similarity=0.286 Sum_probs=33.0
Q ss_pred CCcEEEEEEEcccccccCceEEEEEEEEcCCc-ceeEeeeceee
Q psy10650 219 SGPVLCRVSLDRGGYVPGETIIINATVYNRSK-ITVKSTKAALT 261 (446)
Q Consensus 219 sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~-k~ik~i~~~L~ 261 (446)
..|+.+.+.||+. .++||.+.+.+.|.|.+. ..++ +.+.|.
T Consensus 78 ~kp~~v~~~LP~~-v~~GD~~~i~~~v~N~~~~~~~~-v~v~l~ 119 (915)
T 2hr0_B 78 MQDFFIDLRLPYS-VVRNEQVEIRAVLYNYRQNQELK-VRVELL 119 (915)
T ss_dssp CCSSEEEEECCSE-EETTCCEEEEEEEEECCSSCCEE-EEEEEC
T ss_pred eccEEEEccCCCE-EecCcEEEEEEEEEcCCCCeeEE-EEEEEe
Confidence 4577799999986 689999999999999998 7653 555553
No 39
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=24.18 E-value=4.8e+02 Score=28.29 Aligned_cols=89 Identities=13% Similarity=0.082 Sum_probs=51.5
Q ss_pred ceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEEEeccceeeeeEEEEeeeecCccCCCCccceeeee
Q psy10650 282 PVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQYLARNKVLESETRELASLTRGKIKPGERDDWTNQQ 361 (446)
Q Consensus 282 ~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y~a~~~~~~~~~~~V~~~~~~~V~~g~~~~~~~~~ 361 (446)
.+.+.+.+ .....|+.+.|.+.+.|.|+.. +.+.+.|--.+.|+........... .....+.|++.. ..+
T Consensus 517 ~v~~~i~~--~~~~iG~df~v~l~~~N~s~~~-~~v~~~l~a~~v~YtG~~~~~~~~~----~~~~~L~p~~~~---~i~ 586 (731)
T 1ex0_A 517 NVDMDFEV--ENAVLGKDFKLSITFRNNSHNR-YTITAYLSANITFYTGVPKAEFKKE----TFDVTLEPLSFK---KEA 586 (731)
T ss_dssp CEEEEEEE--CCCBTTCCEEEEEEEEECSSSC-EEEEEEEEEEEECTTSCEEEEEEEE----EEEEEECTTEEE---EEE
T ss_pred CeEEEEec--CCCCCCCCEEEEEEEEECCCCC-EEEEEEEEEEEEeeCCccccceeEe----eEEEEECCCceE---EEE
Confidence 46666666 6667899999999999998865 4567766665555543222111111 112245666554 456
Q ss_pred EecCC--CCCCCcCCCceEEEE
Q psy10650 362 LYVPP--LPPTNLRGCHLIKIQ 381 (446)
Q Consensus 362 L~IP~--i~PT~l~~~~iI~V~ 381 (446)
+.|+. -.+. +....+|++.
T Consensus 587 ~~i~y~~Y~~~-L~d~~~i~~~ 607 (731)
T 1ex0_A 587 VLIQAGEYMGQ-LLEQASLHFF 607 (731)
T ss_dssp EEECHHHHTTT-CCTTCEEEEE
T ss_pred EEECHHHHhhh-ccCCCEEEEE
Confidence 66665 1122 2345666664
No 40
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=24.12 E-value=81 Score=26.12 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=33.5
Q ss_pred ceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEEEe
Q psy10650 282 PVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQYLA 329 (446)
Q Consensus 282 ~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y~a 329 (446)
.+.+.+++|++. ..||.+.|.+.+.|.-...+. +++.|.....|.+
T Consensus 7 ~~~~~l~lPysv-~rgE~~~~~~~V~nyl~~~~~-v~v~L~~s~~~~~ 52 (118)
T 3es6_B 7 IIIKNFDIPKSV-RPNDEVTAVLAVQTELKECMV-VKTYLISSIPLQG 52 (118)
T ss_dssp CCEECCCCCSEE-CSSCCEEEEEEEEECCSSCEE-EEEEEEESSCCCS
T ss_pred eEEEEeeCCceE-ecCCEEEEEEEEEecccceEE-EEEEecCCcCEEc
Confidence 455666777664 799999999999998776663 7777765444433
No 41
>2g30_A AP-2 complex subunit beta-1; alpha-helical ARH peptide, platform domain, sandwich domain, endocytosis, adaptor, endocytosis/exocytosis complex; 1.60A {Homo sapiens} SCOP: b.1.10.1 d.105.1.1 PDB: 1e42_A 3h1z_A 3hs9_A 2iv9_A 2iv8_A
Probab=23.85 E-value=1.4e+02 Score=28.12 Aligned_cols=42 Identities=7% Similarity=0.090 Sum_probs=36.3
Q ss_pred CcEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeeeccc
Q psy10650 220 GPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQPF 265 (446)
Q Consensus 220 G~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~ 265 (446)
.-+.+...+.|. +-.|.+.+.+.|.|...|..+.+.+.+..|
T Consensus 42 ~GLeI~g~f~r~----~g~i~l~l~~~N~s~~~is~faIQfNkNsF 83 (258)
T 2g30_A 42 KGLEISGTFTHR----QGHIYMEMNFTNKALQHMTDFAIQFNKNSF 83 (258)
T ss_dssp TTEEEEEEEEEE----TTEEEEEEEEEECSSSCBCCCEEEECCBTT
T ss_pred CcEEEEEEEEEe----CCEEEEEEEEecCCccceeeeEEEEccccc
Confidence 347788888888 678999999999999999999999988875
No 42
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=22.92 E-value=1.4e+02 Score=29.35 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=30.0
Q ss_pred CcEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeece
Q psy10650 220 GPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAA 259 (446)
Q Consensus 220 G~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~ 259 (446)
|+|.++++.+..+ .+...|.+.|.|....+++-++.-
T Consensus 22 ~~l~v~Ls~~~~~---~~~~~vk~tvtN~g~~~~~lLk~~ 58 (343)
T 2x3c_A 22 AGLDAQLTLVDGS---TDDVRVNLTLTNTGDKPIRLLKWQ 58 (343)
T ss_dssp -CEEEEEEECCCS---SSCCEEEEEEEECSSSCEEEEGGG
T ss_pred CceEEEEEecccC---CCCeEEEEEEEeCCCCceEeeccC
Confidence 4788888888766 788999999999999998766653
No 43
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=22.51 E-value=1e+02 Score=25.59 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=25.0
Q ss_pred CCceeEEEEeccceecCCCeEEEEEEEeeccceee
Q psy10650 280 SGPVLCRVSLDRGGYVPGETIIINATVYNRSKITV 314 (446)
Q Consensus 280 ~G~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I 314 (446)
.|.+.+++..+. .|+.+.+.+.|.|.++..+
T Consensus 4 ~~~l~~~v~~~~----~g~~v~~~ltv~N~s~~~v 34 (120)
T 3isy_A 4 NQEVVLSIDAIQ----EPEQIKFNMSLKNQSERAI 34 (120)
T ss_dssp CCSEEEEEEEEE----CSSCEEEEEEEEECSSSCE
T ss_pred ccEEEEEEeecc----CCCeEEEEEEEEcCCCCcE
Confidence 577777777665 7899999999999877655
No 44
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=21.50 E-value=3.2e+02 Score=32.10 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=29.7
Q ss_pred eecCCcEEEEEEEcccccccCceEEEEEEEEcCCcceeE
Q psy10650 216 CVSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVK 254 (446)
Q Consensus 216 c~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik 254 (446)
.+..-.-.+-++.||..|.|||+|.+.+-.-|..-+++.
T Consensus 98 ~v~~~~~~~fiqTDK~iY~Pgq~V~~rv~~~~~~~~p~~ 136 (1451)
T 4acq_A 98 MVKNEDSLVFVQTDKSIYKPGQTVKFRVVSMDENFHPLN 136 (1451)
T ss_dssp EEECCCCEEEEEESCSEECTTCEEEEEEEEECTTCCBCC
T ss_pred EEEccCccEEEECCCCcCCCCCEEEEEEEEECCCCcCcc
Confidence 344444457789999999999999999888887655443
No 45
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=21.45 E-value=4.9e+02 Score=28.05 Aligned_cols=46 Identities=7% Similarity=-0.034 Sum_probs=33.0
Q ss_pred ceeEEEEeccceecCCCeEEEEEEEeeccceeeeeeEEEEEEEEEEEec
Q psy10650 282 PVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTETIQYLAR 330 (446)
Q Consensus 282 ~v~l~~sl~r~gY~pGE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y~a~ 330 (446)
.+.+.+.+.... .|+.+.+.+.+.|.|+.. +.+.+.|.-.+.|+..
T Consensus 472 ~v~~~i~~~~~~--~G~df~v~v~~~N~s~~~-~~v~~~l~a~~v~YtG 517 (695)
T 1g0d_A 472 RLQLSIKHAQPV--FGTDFDVIVEVKNEGGRD-AHAQLTMLAMAVTYNS 517 (695)
T ss_dssp CEEEEEEECCCB--TTCCEEEEEEEEECSSSC-EEEEEEEEEEEECTTC
T ss_pred CeEEEEEeCCCC--CCCCEEEEEEEEECCCCC-EEEEEEEEEEEEeeCC
Confidence 366777665555 899999999999988865 4566766655555543
No 46
>3zy7_A AP-1 complex subunit gamma-1; endocytosis, protein design, computational design; 1.09A {Mus musculus} PDB: 2a7b_A 1gyv_A 1gyw_A
Probab=21.15 E-value=3.4e+02 Score=22.17 Aligned_cols=93 Identities=10% Similarity=0.049 Sum_probs=55.9
Q ss_pred ecCCcEEEEEEEcccccccCceEEEEEEEEcCCcceeEeeeceeeeccccccccceeeeeEecCCceeEEEEeccc-eec
Q psy10650 217 VSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITVKSTKAALTEQPFDCEIEHKLGVACVSSGPVLCRVSLDRG-GYV 295 (446)
Q Consensus 217 ~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~ik~i~~~L~q~~~~~~~~~~~~~~c~~~G~v~l~~sl~r~-gY~ 295 (446)
+.+.-|.+.+.+.|..=-| ..+.|.+.+.|.+...|..+.+...= ...++|++.-+.. ...
T Consensus 10 ~~~~~l~I~~~~~~~~~~~-~~~~i~~~~~N~s~~~it~f~fqaAV-----------------PKs~kL~L~p~Sg~~l~ 71 (122)
T 3zy7_A 10 YDALGLKIEFTFERSNTNP-SVTVITIQASNSTELDMTDFVFQAAV-----------------PKTFQLQLLSPSSSVVP 71 (122)
T ss_dssp EEETTEEEEEEEECC-----CEEEEEEEEEECSSSCBEEEEEEEEC-----------------CTTSEEEECCCSCSCBC
T ss_pred EeCCCEEEEEEEEcCCCCC-CeEEEEEEEEECCCCccccEEEEEEc-----------------CcccEEEecCCCCCccC
Confidence 3455688888888754222 35789999999999999887655431 2234455544442 233
Q ss_pred C--CCeEEEEEEEeeccceeeeeeEEEEEEEEEEEeccc
Q psy10650 296 P--GETIIINATVYNRSKITVKSTKAALTETIQYLARNK 332 (446)
Q Consensus 296 p--GE~I~i~v~I~N~S~~~I~~i~v~Liq~v~y~a~~~ 332 (446)
| |..|.=.+.|.|.....+ +|.=.+.|..++.
T Consensus 72 p~~~~~itQ~l~i~n~~~~~l-----klR~klsY~~~g~ 105 (122)
T 3zy7_A 72 AFNTGTITQVIKVLNPQKQQL-----RMRIKLTFNWNGY 105 (122)
T ss_dssp GGGSCCEEEEEEEECTTCCCC-----CEEEEEEEEETTE
T ss_pred CCCCCCEEEEEEEECCCCCCE-----EEEEEEEEEECCE
Confidence 4 566777778888654433 2333466776654
No 47
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=21.06 E-value=1.1e+02 Score=25.34 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=30.3
Q ss_pred ecCCcEEEEEEEcccccccCceEEEEEEEEcCCccee
Q psy10650 217 VSSGPVLCRVSLDRGGYVPGETIIINATVYNRSKITV 253 (446)
Q Consensus 217 ~~sG~v~l~v~lpr~gYvPGE~I~v~v~I~N~S~k~i 253 (446)
+.-|-.|+.+-=.+.-..+||+|++++..+|.....+
T Consensus 77 l~PGG~HvML~gl~~~l~~G~~v~ltL~Fe~~~~v~v 113 (120)
T 2k6w_A 77 LKPGGYHFMLLGLKRPLKAGEEVELDLLFAGGKVLKV 113 (120)
T ss_dssp ECTTTEEEEEEEESSCBCTTCEEEEEEEETTTEEEEE
T ss_pred ccCCceEEEEeCCCCCCCCCCEEEEEEEECCCCeEEE
Confidence 5677788888767888999999999999998765544
Done!