BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10659
(140 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307211652|gb|EFN87676.1| E3 ubiquitin-protein ligase RFWD2 [Harpegnathos saltator]
Length = 688
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 100/144 (69%), Gaps = 24/144 (16%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND LCPICF+LI EAHITRCGHTFC+SCI K +E + +CPKCS +L + +FPNFLL+E
Sbjct: 43 NDYLCPICFDLIDEAHITRCGHTFCYSCIVKSLETKDRCPKCSFTLSKQD-IFPNFLLHE 101
Query: 80 LVQKHKIKS---------AQDS--------------DGLRDFVASESQNLSLPDVNLMLE 116
L+ K+KI+S A D DGLR+ VA+ES NL+LPDVN+MLE
Sbjct: 102 LILKYKIRSKGLSQIGSYATDGRRKSAGTDSLSSACDGLRNIVAAESANLTLPDVNVMLE 161
Query: 117 VLNQRKHLLEAESSVAQYKLLYEL 140
VL QRKHLLEAE+ AQ KLL+E
Sbjct: 162 VLTQRKHLLEAETCTAQNKLLHEF 185
>gi|242021289|ref|XP_002431077.1| RING finger and WD repeat domain protein, putative [Pediculus
humanus corporis]
gi|212516326|gb|EEB18339.1| RING finger and WD repeat domain protein, putative [Pediculus
humanus corporis]
Length = 642
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 106/163 (65%), Gaps = 25/163 (15%)
Query: 2 SATSTPSRSLKRQHSPPDN-----------DLLCPICFELIREAHITRCGHTFCFSCISK 50
+ S S+S K+ H N D LCPICFELI EAHITRCGHT+C+SCI+K
Sbjct: 16 GSASHRSQSFKQSHQSSLNGVNESNEEVSSDYLCPICFELIEEAHITRCGHTYCYSCITK 75
Query: 51 CVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIK-SAQD------------SDGLRD 97
+ + +CP+C S + +FPNFLLN+LV KHK K AQ+ ++GLRD
Sbjct: 76 ALVEKPQCPRCGVSTR-VTDIFPNFLLNDLVSKHKTKLFAQELSQALNSQERVHTNGLRD 134
Query: 98 FVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
FV S SQNLSLPDVN+MLEVLNQRK +LEAE+ AQ +LLYE
Sbjct: 135 FVTSGSQNLSLPDVNVMLEVLNQRKCILEAETCTAQNELLYEF 177
>gi|91077676|ref|XP_974586.1| PREDICTED: similar to E3 ubiquitin-ligase protein COP1 [Tribolium
castaneum]
gi|270001535|gb|EEZ97982.1| hypothetical protein TcasGA2_TC000377 [Tribolium castaneum]
Length = 662
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 96/149 (64%), Gaps = 24/149 (16%)
Query: 9 RSLKRQHSPPDN--------DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPK 60
R+ KRQ S D CP+CF LI EA+IT+CGHTFC++CI K +E +CPK
Sbjct: 28 RTPKRQRSTAGGGSFEEKTTDFSCPVCFNLIEEAYITKCGHTFCYTCILKSIEALKRCPK 87
Query: 61 CSASLPDMNSVFPNFLLNELVQKHKIK----------------SAQDSDGLRDFVASESQ 104
C+A + + +FPNFLLNEL++KHK + +DGLRDFVA+ESQ
Sbjct: 88 CNAPVTGEDMIFPNFLLNELIRKHKTRLNNFEALGLNRDSSGEFGTSADGLRDFVATESQ 147
Query: 105 NLSLPDVNLMLEVLNQRKHLLEAESSVAQ 133
NL+LPDVN+MLEVL QRK LLEAES AQ
Sbjct: 148 NLTLPDVNVMLEVLTQRKQLLEAESCAAQ 176
>gi|340725942|ref|XP_003401323.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Bombus
terrestris]
Length = 676
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 96/146 (65%), Gaps = 25/146 (17%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
+ND LCPIC E+I EAHITRCGHTFC+ CI K +E +CPKCS +L + +FPNFLL+
Sbjct: 67 NNDYLCPICLEVIDEAHITRCGHTFCYRCIIKSLEANGRCPKCSYALTQQD-IFPNFLLH 125
Query: 79 ELVQKHKIK----------SAQDS--------------DGLRDFVASESQNLSLPDVNLM 114
EL+ K+K + A D DGLRD +A+ES NL+LPDVN+M
Sbjct: 126 ELISKYKTRIKGLAELGSSYAADGRHRVVGTDLPVPPHDGLRDIIAAESANLTLPDVNVM 185
Query: 115 LEVLNQRKHLLEAESSVAQYKLLYEL 140
LEVL QRKHLLEAE+ AQ KLL+E
Sbjct: 186 LEVLTQRKHLLEAETCTAQNKLLHEF 211
>gi|345496707|ref|XP_003427793.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Nasonia
vitripennis]
Length = 675
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 96/148 (64%), Gaps = 27/148 (18%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
++D LCPICFE I EAH+TRCGHTFC+ CI + +E +CPKC+ +L + +FPNFLLN
Sbjct: 41 NSDYLCPICFETIEEAHVTRCGHTFCYKCIIRSLESLGRCPKCNINLTQQD-IFPNFLLN 99
Query: 79 ELVQKHKIK--------------------------SAQDSDGLRDFVASESQNLSLPDVN 112
EL+ K+K + S SDGLR+F+AS+S +LSLPDVN
Sbjct: 100 ELIAKYKTRAKGIGALDRTLALDNKGKGTFIPMDSSVGISDGLRNFIASDSTSLSLPDVN 159
Query: 113 LMLEVLNQRKHLLEAESSVAQYKLLYEL 140
MLEVL QRKHLLEAES AQ +LLYE
Sbjct: 160 AMLEVLTQRKHLLEAESCAAQNRLLYEF 187
>gi|170033008|ref|XP_001844371.1| E3 ubiquitin-ligase protein COP1 [Culex quinquefasciatus]
gi|167873485|gb|EDS36868.1| E3 ubiquitin-ligase protein COP1 [Culex quinquefasciatus]
Length = 685
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 94/131 (71%), Gaps = 10/131 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND LCPICF++I EAHIT+CGHTFC CI K +E+ KCPKC+ +L +S+ PN+LLN+
Sbjct: 56 NDFLCPICFDVITEAHITKCGHTFCHHCIIKSIEVTKKCPKCNYTLTSHDSIVPNYLLND 115
Query: 80 LVQKHKIK----------SAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAES 129
L+ K K+K S +D L+ F+ASES+ LSL DVN+MLE+LNQRK LLEAES
Sbjct: 116 LITKFKLKKKGTDSSNTASGDSADTLKHFLASESKKLSLSDVNVMLEILNQRKLLLEAES 175
Query: 130 SVAQYKLLYEL 140
AQ +LL+E
Sbjct: 176 CAAQNRLLHEF 186
>gi|312384230|gb|EFR29000.1| hypothetical protein AND_02381 [Anopheles darlingi]
Length = 1283
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 70/154 (45%), Positives = 94/154 (61%), Gaps = 33/154 (21%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
+D LCPICF++I EAHITRCGHTFC CIS+ +++ KCPKC++ L + + PNF+LNE
Sbjct: 78 SDFLCPICFDIINEAHITRCGHTFCHQCISRSIDVTKKCPKCNSPLATQDHILPNFVLNE 137
Query: 80 LVQKHKIKS---------------------------------AQDSDGLRDFVASESQNL 106
L+ KH++K + + D LR F+A+ES+ L
Sbjct: 138 LITKHRLKMGMFGGGGGLQRNRSQPGMVSPKAGQPGLGDAIGSGEGDTLRHFLATESKKL 197
Query: 107 SLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
SL DVN+MLE+L QRK LLEAES AQ +LL+E
Sbjct: 198 SLSDVNVMLEILTQRKTLLEAESCAAQNRLLHEF 231
>gi|347970796|ref|XP_003436639.1| AGAP013233-PA [Anopheles gambiae str. PEST]
gi|333466835|gb|EGK96393.1| AGAP013233-PA [Anopheles gambiae str. PEST]
Length = 817
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 38/159 (23%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND LCPICF++I EA+ITRCGHTFC CI++ +++ KCPKC+ L + PNFLLNE
Sbjct: 61 NDFLCPICFDIINEAYITRCGHTFCHQCIARSIDVAKKCPKCNYPLASHEHIVPNFLLNE 120
Query: 80 LVQKHKIK--------------------------------------SAQDSDGLRDFVAS 101
L+ KH++K + + D L+ F+A+
Sbjct: 121 LITKHRLKGGGGGGGGGLLHRHKSSQPGDNSPQFHTGGACGGGDANAGGEGDTLKHFLAT 180
Query: 102 ESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
ES+ LSL DVN+MLE+L QRK LLEAES AQ +LL+E
Sbjct: 181 ESKKLSLSDVNVMLEILTQRKTLLEAESCAAQNRLLHEF 219
>gi|432914419|ref|XP_004079103.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Oryzias latipes]
Length = 705
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 90/132 (68%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICFE+I EAH+T+CGH+FC+ CI + +E +CPKC+ + +++ +FPNFL+NE
Sbjct: 107 NDFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIVDNVDQLFPNFLVNE 166
Query: 80 LVQKHKIKSAQDS------DGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ KHK +S + +G R D ++ + +NL L +VNLMLE+L Q+K LEAE
Sbjct: 167 LILKHKQRSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAE 226
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 227 SQAAQRQILMEF 238
>gi|260828987|ref|XP_002609444.1| hypothetical protein BRAFLDRAFT_93483 [Branchiostoma floridae]
gi|229294800|gb|EEN65454.1| hypothetical protein BRAFLDRAFT_93483 [Branchiostoma floridae]
Length = 584
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 97/162 (59%), Gaps = 24/162 (14%)
Query: 3 ATSTPSRSLKRQHSPP------------DNDLLCPICFELIREAHITRCGHTFCFSCISK 50
A TP+R ++ PP +ND +CPICF++I EAH+T+CGH+FCF CI +
Sbjct: 2 AGRTPTRRRLKRPQPPIYNGIINTDEDKNNDFVCPICFDMIEEAHMTKCGHSFCFKCIQQ 61
Query: 51 CVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIKSAQDS-------DGLR-----DF 98
+E +CPKC+ + + +FPNFLLNEL+ KH+ + + +G++ +
Sbjct: 62 SLEESNRCPKCNFVIEKTDQIFPNFLLNELILKHRQRLEERKRVKLDQPNGMKLTEFQEL 121
Query: 99 VASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
++ E NL + DVNLMLEVL Q+K LEA+S AQ ++L E
Sbjct: 122 LSHEDDNLDITDVNLMLEVLYQKKTRLEADSIAAQNQILKEF 163
>gi|348531414|ref|XP_003453204.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Oreochromis
niloticus]
Length = 716
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 89/132 (67%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICFE+I EAH+T+CGH+FCF CI + +E +CPKC+ + +++ V+PNFL+NE
Sbjct: 118 NDFVCPICFEMIDEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIIDNVDQVYPNFLVNE 177
Query: 80 LVQKHKIKSAQDS------DGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K +S + +G R D ++ + +NL L +VNLMLE+L Q+K LEAE
Sbjct: 178 LILKQKQRSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLLQKKKQLEAE 237
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 238 SQAAQRQILMEF 249
>gi|387019679|gb|AFJ51957.1| e3 ubiquitin-protein ligase RFWD2-like [Crotalus adamanteus]
Length = 709
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 89/132 (67%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 115 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 174
Query: 80 LVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + + S+G R DF+ +E NL L +VNLMLE+L Q+K LEAE
Sbjct: 175 LILKQKQRFEEKRFKLDHSNGHRWQIFQDFLGTEQDNLDLANVNLMLELLVQKKKQLEAE 234
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 235 SHAAQLQILMEF 246
>gi|126306441|ref|XP_001373596.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2 [Monodelphis
domestica]
Length = 808
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 89/136 (65%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 141 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 200
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL LP+VNLMLE+L Q+K
Sbjct: 201 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLPNVNLMLELLVQKKKQ 260
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 261 LEAESHAAQLQILMEF 276
>gi|410924241|ref|XP_003975590.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Takifugu
rubripes]
Length = 703
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 87/132 (65%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICFE+I EAH+T+CGH+FCF CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 106 NDFVCPICFEMIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNE 165
Query: 80 LVQKHKIKSAQDS------DGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K S + +G R D + + +NL L +VNLMLE+L Q+K LEAE
Sbjct: 166 LILKQKQMSEEKRLKLDHPNGSRWQIFQDALNPDQENLDLANVNLMLELLIQKKKQLEAE 225
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 226 SQAAQRQILMEF 237
>gi|410223720|gb|JAA09079.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410259874|gb|JAA17903.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410301284|gb|JAA29242.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410339121|gb|JAA38507.1| ring finger and WD repeat domain 2 [Pan troglodytes]
Length = 727
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 89/132 (67%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + + S+G R D++ ++ NL L +VNLMLE+L Q+K LEAE
Sbjct: 192 LILKQKQRFEEKRFKLDHSNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAE 251
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 252 SHAAQLQILMEF 263
>gi|395729376|ref|XP_003775537.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Pongo
abelii]
Length = 707
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 89/132 (67%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + + S+G R D++ ++ NL L +VNLMLE+L Q+K LEAE
Sbjct: 192 LILKQKQRFEEKRFKLDHSNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAE 251
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 252 SHAAQLQILMEF 263
>gi|50233824|ref|NP_001001740.1| E3 ubiquitin-protein ligase RFWD2 isoform d24 [Homo sapiens]
gi|332811252|ref|XP_001153038.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Pan
troglodytes]
gi|46241158|gb|AAS82851.1| constitutive photomorphogenic protein isoform d24 [Homo sapiens]
Length = 707
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 89/132 (67%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + + S+G R D++ ++ NL L +VNLMLE+L Q+K LEAE
Sbjct: 192 LILKQKQRFEEKRFKLDHSNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAE 251
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 252 SHAAQLQILMEF 263
>gi|297662665|ref|XP_002809816.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Pongo
abelii]
Length = 731
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D++ ++ NL L +VNLMLE+L Q+K
Sbjct: 192 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQ 251
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 252 LEAESHAAQLQILMEF 267
>gi|21359963|ref|NP_071902.2| E3 ubiquitin-protein ligase RFWD2 isoform a [Homo sapiens]
gi|114568088|ref|XP_514018.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Pan
troglodytes]
gi|55976539|sp|Q8NHY2.1|RFWD2_HUMAN RecName: Full=E3 ubiquitin-protein ligase RFWD2; AltName:
Full=Constitutive photomorphogenesis protein 1 homolog;
Short=hCOP1; AltName: Full=RING finger and WD repeat
domain protein 2; AltName: Full=RING finger protein 200
gi|21105537|gb|AAM34692.1|AF508940_1 constitutive photomorphogenic protein [Homo sapiens]
gi|28394261|tpg|DAA01050.1| TPA_exp: RING finger protein COP1 [Homo sapiens]
gi|33327265|gb|AAQ08989.1| putative ubiquitin ligase COP1 [Homo sapiens]
gi|63102253|gb|AAH94728.1| Ring finger and WD repeat domain 2 [Homo sapiens]
gi|119611406|gb|EAW91000.1| ring finger and WD repeat domain 2, isoform CRA_b [Homo sapiens]
gi|189054516|dbj|BAG37289.1| unnamed protein product [Homo sapiens]
gi|410223718|gb|JAA09078.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410259872|gb|JAA17902.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410301282|gb|JAA29241.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410339119|gb|JAA38506.1| ring finger and WD repeat domain 2 [Pan troglodytes]
Length = 731
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D++ ++ NL L +VNLMLE+L Q+K
Sbjct: 192 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQ 251
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 252 LEAESHAAQLQILMEF 267
>gi|397508595|ref|XP_003846253.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RFWD2
[Pan paniscus]
Length = 749
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D++ ++ NL L +VNLMLE+L Q+K
Sbjct: 192 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQ 251
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 252 LEAESHAAQLQILMEF 267
>gi|119611405|gb|EAW90999.1| ring finger and WD repeat domain 2, isoform CRA_a [Homo sapiens]
Length = 770
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D++ ++ NL L +VNLMLE+L Q+K
Sbjct: 192 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQ 251
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 252 LEAESHAAQLQILMEF 267
>gi|73961335|ref|XP_537181.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Canis lupus
familiaris]
Length = 733
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 91/146 (62%), Gaps = 15/146 (10%)
Query: 10 SLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMN 69
L + ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++
Sbjct: 124 GLINSYEGKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNID 183
Query: 70 SVFPNFLLNELVQKHKIK----------SAQDSDG-----LRDFVASESQNLSLPDVNLM 114
++PNFL+NEL+ K K + S ++G L+D + ++ NL L +VNLM
Sbjct: 184 HLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQILQDLLGTDQDNLDLANVNLM 243
Query: 115 LEVLNQRKHLLEAESSVAQYKLLYEL 140
LE+L Q+K LEAES AQ ++L E
Sbjct: 244 LELLVQKKKQLEAESHAAQLQILMEF 269
>gi|426332831|ref|XP_004027998.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Gorilla gorilla
gorilla]
Length = 565
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 97 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNVDHLYPNFLVNE 156
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D++ ++ NL L +VNLMLE+L Q+K
Sbjct: 157 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQ 216
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 217 LEAESHAAQLQILMEF 232
>gi|449509373|ref|XP_002192026.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Taeniopygia guttata]
Length = 671
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 72 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 131
Query: 80 LVQKHKIKSAQ----------DSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K +S + ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 132 LILKQKQRSEEKRLKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQ 191
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 192 LEAESHAAQLQILMEF 207
>gi|402858321|ref|XP_003893660.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Papio
anubis]
Length = 707
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 88/132 (66%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + + S+G R D + ++ NL L +VNLMLE+L Q+K LEAE
Sbjct: 192 LILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAE 251
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 252 SHAAQLQILMEF 263
>gi|383420753|gb|AFH33590.1| E3 ubiquitin-protein ligase RFWD2 isoform a [Macaca mulatta]
Length = 727
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 88/132 (66%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + + S+G R D + ++ NL L +VNLMLE+L Q+K LEAE
Sbjct: 192 LILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAE 251
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 252 SHAAQLQILMEF 263
>gi|432097690|gb|ELK27802.1| E3 ubiquitin-protein ligase RFWD2 [Myotis davidii]
Length = 695
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 88/132 (66%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 84 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 143
Query: 80 LVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + + S+G R D + ++ NL L +VNLMLE+L Q+K LEAE
Sbjct: 144 LILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAE 203
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 204 SHAAQLQILMEF 215
>gi|390477079|ref|XP_003735239.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Callithrix
jacchus]
Length = 707
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 88/132 (66%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + + S+G R D + ++ NL L +VNLMLE+L Q+K LEAE
Sbjct: 192 LILKQKQRCEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAE 251
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 252 SHAAQLQILMEF 263
>gi|363736531|ref|XP_426628.3| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Gallus gallus]
Length = 698
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 108 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 167
Query: 80 LVQKHKIKSAQ----------DSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K +S + ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 168 LILKQKQRSEEKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQ 227
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 228 LEAESHAAQLQILMEF 243
>gi|332219665|ref|XP_003258976.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Nomascus
leucogenys]
Length = 707
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 88/132 (66%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + + S+G R D + ++ NL L +VNLMLE+L Q+K LEAE
Sbjct: 192 LILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAE 251
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 252 SHAAQLQILMEF 263
>gi|169158558|emb|CAQ15481.1| novel protein similar to vertebrate ring finger and WD repeat
domain 2 (RFWD2, zgc:163067) [Danio rerio]
Length = 694
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 87/132 (65%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICFE+I EAH+T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 94 NDFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNE 153
Query: 80 LVQKHKIKSAQDS------DG-----LRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K +S + +G +D + ++ +N+ L +VN +LE L Q+K LEAE
Sbjct: 154 LILKQKQRSEEKRLKRDHPNGTKWQVFQDVLGADQENMDLANVNYILEYLLQKKKQLEAE 213
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 214 SQAAQRQILMEF 225
>gi|395825003|ref|XP_003785735.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Otolemur
garnettii]
Length = 711
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 88/132 (66%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 136 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 195
Query: 80 LVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + + S+G R D + ++ NL L +VNLMLE+L Q+K LEAE
Sbjct: 196 LILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAE 255
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 256 SHAAQLQILMEF 267
>gi|148235253|ref|NP_001083011.1| E3 ubiquitin-protein ligase RFWD2 [Danio rerio]
gi|141796336|gb|AAI39709.1| Zgc:163067 protein [Danio rerio]
Length = 694
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 87/132 (65%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICFE+I EAH+T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 94 NDFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNE 153
Query: 80 LVQKHKIKSAQDS------DG-----LRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K +S + +G +D + ++ +N+ L +VN +LE L Q+K LEAE
Sbjct: 154 LILKQKQRSEEKRLKRDHPNGTKWQVFQDVLGADQENMDLANVNYILEYLLQKKKQLEAE 213
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 214 SQAAQRQILMEF 225
>gi|26024211|ref|NP_036061.1| E3 ubiquitin-protein ligase RFWD2 [Mus musculus]
gi|55976616|sp|Q9R1A8.2|RFWD2_MOUSE RecName: Full=E3 ubiquitin-protein ligase RFWD2; AltName:
Full=Constitutive photomorphogenesis protein 1 homolog;
Short=mCOP1; AltName: Full=RING finger and WD repeat
domain protein 2
gi|20800468|gb|AAD51094.2| constitutive photomorphogenic protein [Mus musculus]
gi|52350654|gb|AAH82804.1| Ring finger and WD repeat domain 2 [Mus musculus]
gi|148707402|gb|EDL39349.1| ring finger and WD repeat domain 2 [Mus musculus]
Length = 733
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 134 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 193
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 194 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 253
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 254 LEAESHAAQLQILMEF 269
>gi|348577823|ref|XP_003474683.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Cavia porcellus]
Length = 954
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 278 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 337
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 338 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGADQDNLDLANVNLMLELLVQKKKQ 397
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 398 LEAESHAAQLQILMEF 413
>gi|332219663|ref|XP_003258975.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Nomascus
leucogenys]
Length = 731
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 192 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 251
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 252 LEAESHAAQLQILMEF 267
>gi|296478996|tpg|DAA21111.1| TPA: ring finger and WD repeat domain 2 [Bos taurus]
Length = 735
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 136 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 195
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 196 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 255
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 256 LEAESHAAQLQILMEF 271
>gi|296229716|ref|XP_002760382.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Callithrix
jacchus]
Length = 731
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 192 LILKQKQRCEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 251
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 252 LEAESHAAQLQILMEF 267
>gi|187957396|gb|AAI58003.1| Ring finger and WD repeat domain 2 [Mus musculus]
Length = 733
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 134 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 193
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 194 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 253
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 254 LEAESHAAQLQILMEF 269
>gi|383420751|gb|AFH33589.1| E3 ubiquitin-protein ligase RFWD2 isoform a [Macaca mulatta]
Length = 711
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 192 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 251
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 252 LEAESHAAQLQILMEF 267
>gi|388452804|ref|NP_001253194.1| E3 ubiquitin-protein ligase RFWD2 [Macaca mulatta]
gi|402858319|ref|XP_003893659.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Papio
anubis]
gi|383420755|gb|AFH33591.1| E3 ubiquitin-protein ligase RFWD2 isoform a [Macaca mulatta]
Length = 731
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 192 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 251
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 252 LEAESHAAQLQILMEF 267
>gi|395825001|ref|XP_003785734.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Otolemur
garnettii]
Length = 735
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 136 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 195
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 196 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 255
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 256 LEAESHAAQLQILMEF 271
>gi|281340942|gb|EFB16526.1| hypothetical protein PANDA_009573 [Ailuropoda melanoleuca]
Length = 606
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 25 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 84
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 85 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 144
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 145 LEAESHAAQLQILMEF 160
>gi|149058294|gb|EDM09451.1| similar to constitutive photomorphogenic protein 1, isoform CRA_b
[Rattus norvegicus]
Length = 733
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 134 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 193
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 194 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 253
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 254 LEAESHAAQLQILMEF 269
>gi|301770741|ref|XP_002920790.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Ailuropoda
melanoleuca]
Length = 722
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 123 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 182
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 183 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 242
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 243 LEAESHAAQLQILMEF 258
>gi|431915989|gb|ELK16243.1| E3 ubiquitin-protein ligase RFWD2, partial [Pteropus alecto]
Length = 555
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 11/142 (7%)
Query: 10 SLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMN 69
L + ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++
Sbjct: 27 GLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNID 86
Query: 70 SVFPNFLLNELVQKHKIKSAQD------SDGLR-----DFVASESQNLSLPDVNLMLEVL 118
++PNFL+NEL+ K K + + S+G R D + ++ NL L +VNLMLE+L
Sbjct: 87 HLYPNFLVNELILKQKQRFEEKRFKLDHSNGHRWQIFQDLLGTDQDNLDLANVNLMLELL 146
Query: 119 NQRKHLLEAESSVAQYKLLYEL 140
Q+K LEAES AQ ++L E
Sbjct: 147 VQKKKQLEAESHAAQLQILMEF 168
>gi|157074030|ref|NP_001096726.1| E3 ubiquitin-protein ligase RFWD2 [Bos taurus]
gi|126010815|gb|AAI33613.1| RFWD2 protein [Bos taurus]
Length = 735
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 136 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 195
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 196 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 255
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 256 LEAESHAAQLQILMEF 271
>gi|327270275|ref|XP_003219915.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Anolis
carolinensis]
Length = 719
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 120 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 179
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 180 LILKQKQRFDEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 239
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 240 LEAESHAAQLQILIEF 255
>gi|62859105|ref|NP_001016199.1| ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
[Xenopus (Silurana) tropicalis]
gi|89268128|emb|CAJ82063.1| ring finger and WD repeat domain 2 [Xenopus (Silurana) tropicalis]
gi|213624124|gb|AAI70678.1| ring finger and WD repeat domain 2 [Xenopus (Silurana) tropicalis]
Length = 684
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 87/132 (65%), Gaps = 11/132 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICFE+I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 89 NDFVCPICFEMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 148
Query: 80 LVQKHKIK------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K + S+G R D + ++ NL L +VNLML++L Q+K LEAE
Sbjct: 149 LILKQKQRFDDKRLKLDPSNGHRWQIFQDLLGTDQDNLDLANVNLMLQLLVQKKRQLEAE 208
Query: 129 SSVAQYKLLYEL 140
S AQ ++L E
Sbjct: 209 SHAAQLQILMEF 220
>gi|171846427|gb|AAI61699.1| LOC100158422 protein [Xenopus laevis]
Length = 727
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 92/147 (62%), Gaps = 12/147 (8%)
Query: 6 TP-SRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
TP S L + ND +CPICFE+I EA++T+CGH+FC+ CI + +E +CPKC+
Sbjct: 117 TPLSNGLINSYEDKSNDFVCPICFEMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV 176
Query: 65 LPDMNSVFPNFLLNELVQKHKIK------SAQDSDGLR-----DFVASESQNLSLPDVNL 113
+ +++ ++PNFL+NEL+ K K + S+G R D + ++ NL L +VNL
Sbjct: 177 VDNIDHLYPNFLVNELILKQKQRFDDKRLKLDPSNGHRWQIFHDLLGADQDNLDLANVNL 236
Query: 114 MLEVLNQRKHLLEAESSVAQYKLLYEL 140
ML++L Q+K LEAES +Q ++L E
Sbjct: 237 MLQLLVQKKRQLEAESHASQLQILMEF 263
>gi|355746208|gb|EHH50833.1| hypothetical protein EGM_01718, partial [Macaca fascicularis]
Length = 625
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 26 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 85
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L ++NLMLE+L Q+K
Sbjct: 86 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANINLMLELLVQKKKQ 145
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 146 LEAESHAAQLQILMEF 161
>gi|350589033|ref|XP_003130377.3| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Sus scrofa]
Length = 445
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 131 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 190
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 191 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQ 250
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 251 LEAESHAAQLQILMEF 266
>gi|344278495|ref|XP_003411029.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Loxodonta africana]
Length = 720
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 88/136 (64%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIK----------SAQDSDG-----LRDFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G L+D + ++ NL L +VN MLE+L Q+K
Sbjct: 192 LILKQKQRFEEKRFKLDHSVSSTNGHRWQMLQDVLGTDQDNLDLANVNFMLELLVQKKKQ 251
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 252 LEAESHAAQLQILMEF 267
>gi|427785535|gb|JAA58219.1| Putative e3 ubiquitin-ligase protein [Rhipicephalus pulchellus]
Length = 626
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 85/132 (64%), Gaps = 10/132 (7%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
++D LCPICF++I EAH+T CGHTFC+ CI+ +E +CPKC+ + ++PNFLLN
Sbjct: 41 NSDFLCPICFDVIEEAHMTPCGHTFCYKCITTGLEYSNRCPKCNFVIEKKEQIYPNFLLN 100
Query: 79 ELVQKHKIKSAQDS---DG-------LRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
EL+ K+K K+A +G L + + ES +++L DV ML+VL+Q+K LEA+
Sbjct: 101 ELITKYKQKAADKKLKLEGNSPVVSELHELILQESDSMNLNDVYNMLDVLSQKKQQLEAD 160
Query: 129 SSVAQYKLLYEL 140
AQ +LL E
Sbjct: 161 CKAAQAQLLREF 172
>gi|351706098|gb|EHB09017.1| E3 ubiquitin-protein ligase RFWD2 [Heterocephalus glaber]
Length = 734
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 91/144 (63%), Gaps = 18/144 (12%)
Query: 12 KRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
+R+ S P L CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ +
Sbjct: 113 QRRTSWP---LHCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHL 169
Query: 72 FPNFLLNELVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLE 116
+PNFL+NEL+ K K + S ++G R D + ++ NL L +VNLMLE
Sbjct: 170 YPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLE 229
Query: 117 VLNQRKHLLEAESSVAQYKLLYEL 140
+L Q+K LEAES AQ ++L E
Sbjct: 230 LLVQKKKQLEAESHAAQLQILMEF 253
>gi|354477523|ref|XP_003500969.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Cricetulus
griseus]
Length = 812
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 88/137 (64%), Gaps = 16/137 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPKCSASLPDMNSVFPNFLLN 78
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+N
Sbjct: 212 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNNRCPKCNYVVDNIDHLYPNFLVN 271
Query: 79 ELVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKH 123
EL+ K K + S ++G R D + ++ NL L +VNLMLE+L Q+K
Sbjct: 272 ELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKK 331
Query: 124 LLEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 332 QLEAESHAAQLQILMEF 348
>gi|355559061|gb|EHH15841.1| hypothetical protein EGK_01992, partial [Macaca mulatta]
Length = 620
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 86/136 (63%), Gaps = 15/136 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPI F++I EA++T+CGH+FC+ CI + +E +CPKC+ +++ ++PNFL+NE
Sbjct: 21 NDFVCPIFFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVGDNIDHLYPNFLVNE 80
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G R D + ++ NL L ++NLMLE+L Q+K
Sbjct: 81 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANINLMLELLVQKKKQ 140
Query: 125 LEAESSVAQYKLLYEL 140
LEAES AQ ++L E
Sbjct: 141 LEAESHAAQLQILMEF 156
>gi|449266465|gb|EMC77518.1| E3 ubiquitin-protein ligase RFWD2, partial [Columba livia]
Length = 580
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 85/131 (64%), Gaps = 15/131 (11%)
Query: 25 PICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKH 84
PICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K
Sbjct: 1 PICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ 60
Query: 85 KIKSAQ----------DSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAES 129
K +S + ++G R D + ++ NL L +VNLMLE+L Q+K LEAES
Sbjct: 61 KQRSEEKRLKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 120
Query: 130 SVAQYKLLYEL 140
AQ ++L E
Sbjct: 121 HAAQLQILMEF 131
>gi|326924742|ref|XP_003208584.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Meleagris
gallopavo]
Length = 696
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 85/131 (64%), Gaps = 15/131 (11%)
Query: 25 PICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKH 84
PICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K
Sbjct: 102 PICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ 161
Query: 85 KIKSAQ----------DSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAES 129
K +S + ++G R D + ++ NL L +VNLMLE+L Q+K LEAES
Sbjct: 162 KQRSEEKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 221
Query: 130 SVAQYKLLYEL 140
AQ ++L E
Sbjct: 222 HAAQLQILMEF 232
>gi|390346065|ref|XP_003726470.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like
[Strongylocentrotus purpuratus]
Length = 647
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 13/138 (9%)
Query: 15 HSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPN 74
+ DND LCPICFE+I EAH+TRCGH+FC CI + +E +CPKC+ + + +FPN
Sbjct: 37 YEDKDNDFLCPICFEVIEEAHMTRCGHSFCQRCILRSLESSNRCPKCNFVIEKTDQIFPN 96
Query: 75 FLLNELVQKH-------KIKSAQDSDG-----LRDFVASESQNLSLPDVNLMLEVLNQRK 122
F LNEL+ K+ ++K G +++F+ + + L +VNLMLE+L +K
Sbjct: 97 FALNELILKYRQQVEEKRLKLGPQQTGAPAPDVQEFI-QDQEKWDLAEVNLMLEILVSKK 155
Query: 123 HLLEAESSVAQYKLLYEL 140
LE ++ VAQ ++L +
Sbjct: 156 RKLEMDNQVAQIQILKDF 173
>gi|345325443|ref|XP_001515470.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Ornithorhynchus
anatinus]
Length = 756
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 15/131 (11%)
Query: 25 PICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKH 84
PICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K
Sbjct: 162 PICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ 221
Query: 85 KIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAES 129
K + S ++G R D + ++ NL L +VNLMLE+L Q+K LEAES
Sbjct: 222 KQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 281
Query: 130 SVAQYKLLYEL 140
AQ ++L E
Sbjct: 282 HAAQLQILMEF 292
>gi|440897554|gb|ELR49211.1| E3 ubiquitin-protein ligase RFWD2, partial [Bos grunniens mutus]
Length = 608
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 15/131 (11%)
Query: 25 PICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKH 84
PICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K
Sbjct: 2 PICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ 61
Query: 85 KIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAES 129
K + S ++G R D + ++ NL L +VNLMLE+L Q+K LEAES
Sbjct: 62 KQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES 121
Query: 130 SVAQYKLLYEL 140
AQ ++L E
Sbjct: 122 HAAQLQILMEF 132
>gi|241167385|ref|XP_002410055.1| ubiquitin ligase Cop1, putative [Ixodes scapularis]
gi|215494716|gb|EEC04357.1| ubiquitin ligase Cop1, putative [Ixodes scapularis]
Length = 602
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 79/131 (60%), Gaps = 15/131 (11%)
Query: 25 PICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKH 84
PICF++I EAH+T CGHTFC+ CI+ +E +CPKC+ + ++PNFLLNEL+ K+
Sbjct: 1 PICFDIIEEAHMTPCGHTFCYKCITTGLEYSNRCPKCNFVVEKKEQIYPNFLLNELITKY 60
Query: 85 KIKSA------QDSDGLRDF---------VASESQNLSLPDVNLMLEVLNQRKHLLEAES 129
K K A Q GL F +A E+ N+ L DV MLE+L+Q+K LEA+
Sbjct: 61 KQKLADKKLKMQTVRGLHFFWVATGFLLLIAQEADNMDLNDVYNMLEILSQKKQQLEADC 120
Query: 130 SVAQYKLLYEL 140
AQ ++L E
Sbjct: 121 KAAQAQILKEF 131
>gi|118344224|ref|NP_001071934.1| zinc finger protein [Ciona intestinalis]
gi|92081586|dbj|BAE93340.1| zinc finger protein [Ciona intestinalis]
Length = 645
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 85/134 (63%), Gaps = 12/134 (8%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
++D +CPICF LI EA++T+CGHTFC++C+ K +E KC KC+++L + ++PN+LLN
Sbjct: 33 NSDFICPICFNLIEEAYMTKCGHTFCYNCLKKSLEQSNKCTKCNSALSKTDEIYPNYLLN 92
Query: 79 ELVQKHKIKSAQ----------DSD--GLRDFVASESQNLSLPDVNLMLEVLNQRKHLLE 126
L+QK K K + DS + +A+E ++ L D++ ML++L +++ L
Sbjct: 93 NLIQKKKKKMDEMLACSKRMKIDSRLWEWQSLLATEDDDIHLADIDQMLKLLQEKRRRLV 152
Query: 127 AESSVAQYKLLYEL 140
ES+VA ++L E
Sbjct: 153 QESAVAHNQVLLEF 166
>gi|116283971|gb|AAH20845.1| RFWD2 protein [Homo sapiens]
Length = 257
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 76/116 (65%), Gaps = 15/116 (12%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQ 120
L+ K K + S ++G R D++ ++ NL L +VNLMLE+L Q
Sbjct: 192 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQ 247
>gi|47216612|emb|CAG10910.1| unnamed protein product [Tetraodon nigroviridis]
Length = 797
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 84/149 (56%), Gaps = 31/149 (20%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL--- 76
ND +CPICFE+I EAH+T+CGH+FCF CI + +E +CPKC+ + +++ ++PNFL
Sbjct: 26 NDFVCPICFEMIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLDAY 85
Query: 77 -----------------LNELVQKHKIKSAQDS------DGLR-----DFVASESQNLSL 108
+NEL+ K K S + +G R D + + +NL L
Sbjct: 86 IFFIDLFSAVSTCDAPEVNELILKQKQMSEEKRLKLDHPNGSRWQIFQDALNPDQENLDL 145
Query: 109 PDVNLMLEVLNQRKHLLEAESSVAQYKLL 137
+VNLMLE+L Q+K LEA S ++++
Sbjct: 146 ANVNLMLELLIQKKKQLEAHSEGQVWQMV 174
>gi|338724555|ref|XP_001493699.3| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Equus caballus]
Length = 570
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 80/126 (63%), Gaps = 15/126 (11%)
Query: 30 LIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIK-- 87
+I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K K +
Sbjct: 1 MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFE 60
Query: 88 --------SAQDSDG-----LRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
S ++G L+D + ++ NL L +VNLMLE+L Q+K LEAES AQ
Sbjct: 61 EKRFKLDHSVSSTNGHRWQILQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL 120
Query: 135 KLLYEL 140
++L E
Sbjct: 121 QILMEF 126
>gi|196000046|ref|XP_002109891.1| hypothetical protein TRIADDRAFT_21397 [Trichoplax adhaerens]
gi|190588015|gb|EDV28057.1| hypothetical protein TRIADDRAFT_21397 [Trichoplax adhaerens]
Length = 659
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 86/145 (59%), Gaps = 19/145 (13%)
Query: 15 HSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD-MNSVFP 73
++ +ND +CPICF +I EA++T+CGH+FC+ CI + ++ KCPKC+ + D ++ +FP
Sbjct: 39 YNDRNNDYICPICFGVIEEAYMTKCGHSFCYECIRRSLDENSKCPKCNFQITDKVDPIFP 98
Query: 74 NFLLNELVQKHK-------------IKSAQDSDGLR----DFVASESQ-NLSLPDVNLML 115
N LNEL+ KHK K+A G R D ++S+S ++ L D+N +L
Sbjct: 99 NITLNELIIKHKRRLDVANKCESSVSKAANIIRGNRLDVADILSSKSNDDMVLSDINYLL 158
Query: 116 EVLNQRKHLLEAESSVAQYKLLYEL 140
E L+++K LE S + +LL E
Sbjct: 159 ESLSEKKQQLELNSKSNRLQLLKEF 183
>gi|410985932|ref|XP_003999269.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Felis catus]
Length = 570
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 15/126 (11%)
Query: 30 LIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIK-- 87
+I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K +
Sbjct: 1 MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQNQRFE 60
Query: 88 --------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
S ++G R D + ++ NL L +VNLMLE+L Q+K LEAES AQ
Sbjct: 61 EKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL 120
Query: 135 KLLYEL 140
++L E
Sbjct: 121 QILMEF 126
>gi|395530863|ref|XP_003767506.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like, partial
[Sarcophilus harrisii]
Length = 175
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 15/120 (12%)
Query: 36 ITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIK-------- 87
+T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K K +
Sbjct: 1 MTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKL 60
Query: 88 --SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
S ++G R D + ++ NL LP+VNLMLE+L Q+K LEAES AQ ++L E
Sbjct: 61 DHSVSSTNGHRWQIFQDLLGTDQDNLDLPNVNLMLELLVQKKKQLEAESHAAQLQILMEF 120
>gi|149058293|gb|EDM09450.1| similar to constitutive photomorphogenic protein 1, isoform CRA_a
[Rattus norvegicus]
Length = 251
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 15/111 (13%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 134 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 193
Query: 80 LVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLML 115
L+ K K + S ++G R D + ++ NL L +VNLM
Sbjct: 194 LILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMW 244
>gi|321456923|gb|EFX68020.1| hypothetical protein DAPPUDRAFT_330505 [Daphnia pulex]
Length = 690
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 10 SLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMN 69
+K + D+DLLCP+C +++ E ++T CGH+FC CI + +EL KCPKCS L
Sbjct: 105 GVKDTYEDRDSDLLCPVCLDMMSEPYVTTCGHSFCHGCIVRSLELASKCPKCSGPLDSSG 164
Query: 70 ---SVFPNFLLNELVQKHKIKSAQDSDG---LRDFVA-SESQNLSLPDVNLMLEVLNQRK 122
SVFPN LN L+ K K K + DG ++DF ++++ ++ M EVL +++
Sbjct: 165 RNPSVFPNVTLNALITKQKKKLVESQDGNILMKDFTTLLDTRDWHPSELVRMQEVLLRKQ 224
Query: 123 HLLEAESSVAQYKLLYEL 140
L+ E + + +LL E
Sbjct: 225 CDLDGERKLTEAQLLNEF 242
>gi|426239933|ref|XP_004013871.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Ovis aries]
Length = 564
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 15/120 (12%)
Query: 36 ITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIK-------- 87
+T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K K +
Sbjct: 1 MTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKL 60
Query: 88 --SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
S ++G R D + ++ NL L +VNLMLE+L Q+K LEAES AQ ++L E
Sbjct: 61 DHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEF 120
>gi|403266440|ref|XP_003925391.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Saimiri boliviensis
boliviensis]
Length = 564
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 15/120 (12%)
Query: 36 ITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIK-------- 87
+T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K K +
Sbjct: 1 MTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRCEEKRFKL 60
Query: 88 --SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
S ++G R D + ++ NL L +VNLMLE+L Q+K LEAES AQ ++L E
Sbjct: 61 DHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEF 120
>gi|293341762|ref|XP_002725041.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Rattus
norvegicus]
gi|293353201|ref|XP_001070577.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Rattus
norvegicus]
Length = 154
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 70/111 (63%), Gaps = 15/111 (13%)
Query: 25 PICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKH 84
PICF+++ +A++T+CGH+ C++CI + +E +CPKC+ + D++ ++PNFL+NEL+ K
Sbjct: 37 PICFDMVEDAYMTKCGHSVCYNCIHQSLEDNNRCPKCNHVVDDIDLLYPNFLVNELILKQ 96
Query: 85 KIKSAQ----------DSDGLR-----DFVASESQNLSLPDVNLMLEVLNQ 120
K +S + ++G R DF ++ NL L + LMLE+L Q
Sbjct: 97 KQRSEEKRFKLDPSVSSTNGHRWQIFPDFQGTDQNNLDLANAKLMLELLVQ 147
>gi|380791671|gb|AFE67711.1| E3 ubiquitin-protein ligase RFWD2 isoform a, partial [Macaca
mulatta]
Length = 224
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 52/66 (78%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHK 85
L+ K K
Sbjct: 192 LILKQK 197
>gi|380791651|gb|AFE67701.1| E3 ubiquitin-protein ligase RFWD2 isoform d24, partial [Macaca
mulatta]
Length = 220
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 52/66 (78%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 132 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 191
Query: 80 LVQKHK 85
L+ K K
Sbjct: 192 LILKQK 197
>gi|449531091|ref|XP_004172521.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 191
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D LCPIC ++IR+A +T CGH+FC+ CI + + CP C+ L + +FPNFLL+
Sbjct: 46 DKDFLCPICMQIIRDAFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTS-DQLFPNFLLD 104
Query: 79 ELVQK---HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
+L++K H+I L E N+S+ +++ +L +L+++K +E E SV K
Sbjct: 105 KLLKKTSAHQIAKTATPIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMK 164
Query: 136 LLYEL 140
+L +
Sbjct: 165 ILTDF 169
>gi|449450966|ref|XP_004143233.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 675
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D LCPIC ++IR+A +T CGH+FC+ CI + + CP C+ L + +FPNFLL+
Sbjct: 46 DKDFLCPICMQIIRDAFLTACGHSFCYMCIITHLRNKSDCPCCAQHLTS-DQLFPNFLLD 104
Query: 79 ELVQK---HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
+L++K H+I L E N+S+ +++ +L +L+++K +E E SV K
Sbjct: 105 KLLKKTSAHQIAKTATPIELFRHALQEGCNVSIKELDSLLAMLSEKKRKMEQEESVRNMK 164
Query: 136 LLYEL 140
+L +
Sbjct: 165 ILTDF 169
>gi|328875233|gb|EGG23598.1| hypothetical protein DFA_05732 [Dictyostelium fasciculatum]
Length = 751
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ L CPIC ++I+E ITRCGH+FC+ CI + + CP C L + +FPNF LN
Sbjct: 135 DDTLSCPICLQIIKEPFITRCGHSFCYQCILTQITDKTSCPICLHYLT-RDQIFPNFALN 193
Query: 79 ELVQKHK---IKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
+V+K + + L++ + E N+S+ D+N ++ L ++K LLE + +Y+
Sbjct: 194 TMVEKFSHSHLATTPPIKQLQNTITHE--NISITDINNIMATLMEKKKLLELQDQQVEYE 251
Query: 136 LLYEL 140
+L +
Sbjct: 252 ILLDF 256
>gi|332656170|gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa subsp. rapa]
Length = 677
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC ++I++A +T CGH+FC+ CI + + CP CS L + N ++PNFLL+
Sbjct: 48 DKDLLCPICMQVIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTN-NQLYPNFLLD 106
Query: 79 ELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K H K+A D RD + ++S+ +V+ +L +L ++K +E E +
Sbjct: 107 KLLKKTSARHVSKTASPLDQFRDAL-QRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNM 165
Query: 135 KLLYEL 140
++L +
Sbjct: 166 QILLDF 171
>gi|302633366|gb|ADL59932.1| constitutively photomorphogenic 1 [Brassica napus]
Length = 677
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC ++I++A +T CGH+FC+ CI + + CP CS L + N ++PNFLL+
Sbjct: 48 DKDLLCPICMQVIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTN-NQLYPNFLLD 106
Query: 79 ELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K H K+A D RD + ++S+ +V+ +L +L ++K +E E +
Sbjct: 107 KLLKKTSARHVSKTASPLDQFRDAL-QRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNM 165
Query: 135 KLLYEL 140
++L +
Sbjct: 166 QILLDF 171
>gi|15225760|ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3 ubiquitin-protein ligase COP1; AltName:
Full=Constitutive photomorphogenesis protein 1
gi|2702280|gb|AAB91983.1| COP1 regulatory protein [Arabidopsis thaliana]
gi|95147316|gb|ABF57293.1| At2g32950 [Arabidopsis thaliana]
gi|330253672|gb|AEC08766.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
Length = 675
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC ++I++A +T CGH+FC+ CI + + CP CS L + N ++PNFLL+
Sbjct: 47 DKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTN-NQLYPNFLLD 105
Query: 79 ELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K H K+A D R+ + ++S+ +V+ +L +L +RK +E E +
Sbjct: 106 KLLKKTSARHVSKTASPLDQFREAL-QRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNM 164
Query: 135 KLLYEL 140
++L +
Sbjct: 165 QILLDF 170
>gi|66806049|ref|XP_636746.1| hypothetical protein DDB_G0288453 [Dictyostelium discoideum AX4]
gi|60465153|gb|EAL63252.1| hypothetical protein DDB_G0288453 [Dictyostelium discoideum AX4]
Length = 970
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
LLCP+C ++I+E I++CGH+FC+ CI + CP C L +FPNF LN+ V
Sbjct: 154 LLCPVCNDMIKEPFISKCGHSFCYQCIIIHLSKSKTCPICMVYLT-REQIFPNFALNKFV 212
Query: 82 QKHKIKSA----QDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLL 137
+K +KS+ R+ +++E NLSL D+NLM+ L ++K LE +Y +L
Sbjct: 213 EKIGVKSSLLPTPTVKQFRNTLSNE--NLSLHDINLMVSTLLEKKKNLEVHDQQVEYDIL 270
Query: 138 YEL 140
+
Sbjct: 271 LDF 273
>gi|402685|gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]
Length = 675
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC ++I++A +T CGH+FC+ CI + + CP CS L + N ++PNFLL+
Sbjct: 47 DKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTN-NQLYPNFLLD 105
Query: 79 ELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K H K+A D R+ + ++S+ +V+ +L +L +RK +E E +
Sbjct: 106 KLLKKTSARHVSKTASPLDQFREAL-QRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNM 164
Query: 135 KLLYEL 140
++L +
Sbjct: 165 QILLDF 170
>gi|110742039|dbj|BAE98955.1| photomorphogenesis repressor [Arabidopsis thaliana]
Length = 391
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC ++I++A +T CGH+FC+ CI + + CP CS L + N ++PNFLL+
Sbjct: 47 DKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTN-NQLYPNFLLD 105
Query: 79 ELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K H K+A D R+ + ++S+ +V+ +L +L +RK +E E +
Sbjct: 106 KLLKKTSARHVSKTASPLDQFREAL-QRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNM 164
Query: 135 KLLYEL 140
++L +
Sbjct: 165 QILLDF 170
>gi|224131692|ref|XP_002321154.1| predicted protein [Populus trichocarpa]
gi|222861927|gb|EEE99469.1| predicted protein [Populus trichocarpa]
Length = 672
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 83/141 (58%), Gaps = 4/141 (2%)
Query: 3 ATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCS 62
A+ PS + + + + D LCPIC ++I++A +T CGH+FC+ CI+ + + CP CS
Sbjct: 28 ASPEPSSAPSAEEAELEKDFLCPICMQIIKDAFLTVCGHSFCYMCITTHLRNKNDCPCCS 87
Query: 63 ASLPDMNSVFPNFLLNELVQKHKIK-SAQDSDGLRDFVASESQN--LSLPDVNLMLEVLN 119
L N +FPNFLL +L++K + +++++ + F S Q +S+ D++ ++ +L
Sbjct: 88 HYLT-TNQLFPNFLLQKLLKKASARQTSKNASPIEHFRQSLQQGCEVSIKDLDTLMSLLA 146
Query: 120 QRKHLLEAESSVAQYKLLYEL 140
+RK +E E + ++L +
Sbjct: 147 ERKRKMEQEEAERNMQVLLDF 167
>gi|391342898|ref|XP_003745752.1| PREDICTED: ubiquitin-protein ligase E3B-like [Metaseiulus
occidentalis]
Length = 1671
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS---VFPNFLLNEL 80
CP+CF +I++A++TRCGH+FC CI + +E + CP C+ L D + VFPN +LN+
Sbjct: 38 CPVCFGMIQDAYMTRCGHSFCHECIKQSIESRPNCPMCATELIDKDGKEQVFPNIMLNDF 97
Query: 81 VQK-HKIK----SAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
+ + H+ K SA + + +E++ L++ D+ L++L +K LE+ S Q K
Sbjct: 98 ISRTHREKRLRPSAPEISSCIMQLFAENKPLNVSDIQHALDLLQTKKLELESNSREMQLK 157
Query: 136 LLYEL 140
LL E
Sbjct: 158 LLREF 162
>gi|224118164|ref|XP_002331573.1| predicted protein [Populus trichocarpa]
gi|222873797|gb|EEF10928.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 83/144 (57%), Gaps = 10/144 (6%)
Query: 5 STPSRSLKRQHSPP----DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPK 60
S S + + PP D D+LCPIC ++I++A +T CGH+FC+ CI+ + + CP
Sbjct: 13 SVNSEATTSKMQPPTEELDKDILCPICMQIIKDAFLTSCGHSFCYLCITTHLRNKNDCPC 72
Query: 61 CSASLPDMNSVFPNFLLNELVQ----KHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLE 116
CS L + N +FPNFLLN+L++ + K+A + LR + + +S+ +++ +L
Sbjct: 73 CSHYLTN-NHIFPNFLLNKLLERTYARQAAKNASPYEHLRQAL-QQGCEVSVKELDGLLT 130
Query: 117 VLNQRKHLLEAESSVAQYKLLYEL 140
+L ++K +E E + ++L +
Sbjct: 131 LLAEKKRKMEQEEAERNMRILLDF 154
>gi|313667084|gb|ADR72985.1| COP1 protein [Brassica rapa var. purpuraria]
gi|338224822|gb|AEI89703.1| COP1 protein [Brassica rapa subsp. chinensis]
Length = 676
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC ++I++A +T CGH+FC+ CI ++ + CP CS L + ++PNFLL+
Sbjct: 48 DKDLLCPICMQVIKDAFLTACGHSFCYMCIITHLKNKSDCPCCSQHLTN-KQLYPNFLLD 106
Query: 79 ELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K H K+A D RD + ++S+ +V+ +L +L ++K +E E +
Sbjct: 107 KLLKKTSARHVSKTASPLDQFRDAL-QRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNM 165
Query: 135 KLLYEL 140
++L +
Sbjct: 166 QILLDF 171
>gi|168037507|ref|XP_001771245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677486|gb|EDQ63956.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D LCPIC + +++A +T CGH+FC++CI + + CP C L + N +FPNFLLN
Sbjct: 49 DKDFLCPICIQTMKDAFLTACGHSFCYTCIMTHLSNKSNCPCCGLYLTN-NQLFPNFLLN 107
Query: 79 ELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L+ K H + +A ++ LR + +L + +++ ++ +L+++K E E +
Sbjct: 108 KLLGKASASHLVSNASPAENLR-LALQQGVDLPVKELDSLMRLLSEKKRKAEQEEAETNM 166
Query: 135 KLLYEL 140
++L E
Sbjct: 167 EILLEF 172
>gi|297823085|ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata]
gi|297325264|gb|EFH55684.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata]
Length = 675
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC ++I++A +T CGH+FC+ CI + + CP CS L + N ++PNFLL+
Sbjct: 47 DKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTN-NQLYPNFLLD 105
Query: 79 ELVQKHKI----KSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K K+A D R+ + ++S+ +V+ +L +L +RK +E E +
Sbjct: 106 KLLKKTSARQVSKTASPLDQFREAL-QRGCDVSIKEVDNLLSLLAERKRKMEQEEAERNM 164
Query: 135 KLLYEL 140
++L +
Sbjct: 165 QILLDF 170
>gi|355716213|gb|AES05541.1| ring finger and WD repeat domain 2 [Mustela putorius furo]
Length = 577
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 15/113 (13%)
Query: 43 FCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIK----------SAQDS 92
FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K K + S +
Sbjct: 1 FCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSST 60
Query: 93 DGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
+G R D + ++ NL L +VNLMLE+L Q+K LEAES AQ ++L E
Sbjct: 61 NGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEF 113
>gi|168027087|ref|XP_001766062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682705|gb|EDQ69121.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 687
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 76/129 (58%), Gaps = 6/129 (4%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
S D D LCPICF+ + +A +T CGH+FC+SCI+ + + CP C+ L + + PNF
Sbjct: 40 SDVDKDFLCPICFQPMEDAFLTSCGHSFCYSCITTHLNNRNNCPNCARYLT-ADRLIPNF 98
Query: 76 LLNELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSV 131
L+ +L++K H ++ LR FV + +L + D++ +L +L++RK +E + +
Sbjct: 99 LVTKLMRKLTSFHCSGKISPAEHLR-FVLQQGADLPMKDIDSLLHLLSERKRRVEQDEAE 157
Query: 132 AQYKLLYEL 140
+ ++L +
Sbjct: 158 SNMEVLLDF 166
>gi|11127996|gb|AAG31173.1| COP1 [Ipomoea nil]
Length = 677
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D +LLCPIC ++I++A +T CGH+FC+ CI + + CP CS L ++PNFLL+
Sbjct: 48 DRELLCPICMQIIKDAFLTSCGHSFCYMCIVTHLHNKSDCPCCSHYLTTAQ-LYPNFLLD 106
Query: 79 ELVQK---HKI-KSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K H+I K+A + R + + + +S+ +++++L +L ++K LE E +
Sbjct: 107 KLLKKTSAHQISKTASPVEQFRHSI-EQGREVSIKELDVLLTILAEKKRKLEQEEAERNM 165
Query: 135 KLLYEL 140
++L E
Sbjct: 166 QILLEF 171
>gi|356554527|ref|XP_003545597.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Glycine max]
Length = 675
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 76/129 (58%), Gaps = 6/129 (4%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
S PD D LCPIC ++I++A +T CGH+FC+ CI + + CP C L + N +FPNF
Sbjct: 42 SEPDKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNTN-LFPNF 100
Query: 76 LLNELVQKHKI----KSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSV 131
LL++L++K K+A + R + + ++S+ +++ +L +L ++K +E E +
Sbjct: 101 LLDKLLKKTSARQISKTASPVEHFRQAL-QKGCDVSIKELDTLLSLLAEKKRKMEQEEAE 159
Query: 132 AQYKLLYEL 140
++L +
Sbjct: 160 RNMQILLDF 168
>gi|168028370|ref|XP_001766701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682133|gb|EDQ68554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D LCPIC + +++A +T CGH+FC++CI + + CP C L + N +FPNFLLN
Sbjct: 48 DKDFLCPICIQTMKDAFLTACGHSFCYTCIMTHLSNKSNCPCCGQYLTN-NQLFPNFLLN 106
Query: 79 ELVQKHK----IKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K + +A ++ LR + +L + +++ ++ +L+ +K E E + A
Sbjct: 107 KLLRKASASQLVSNASPAEHLR-LALQQGVDLPVKELDSLMHLLSDKKRKAEQEEAEANM 165
Query: 135 KLLYEL 140
++L E
Sbjct: 166 EILLEF 171
>gi|383931931|gb|AFH57127.1| COP1 protein, partial [Beta vulgaris subsp. vulgaris]
Length = 474
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+ D DL+CPIC ++I++A +T CGH+FC+ CI + + CP C L + N ++PNF
Sbjct: 5 TETDKDLMCPICMQMIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGRHLTN-NQLYPNF 63
Query: 76 LLNELVQKHKIKS-AQDSDGLRDFVASESQN--LSLPDVNLMLEVLNQRKHLLEAESSVA 132
LL++L++K ++ ++++ + F + Q +S+ +V+ ++ +L ++K +E E +
Sbjct: 64 LLDKLLKKASVRQVSRNASPVEQFRRALLQGCEVSVKEVDTLMSLLAEKKRKMEQEEAER 123
Query: 133 QYKLLYEL 140
++L +
Sbjct: 124 NMQILLDF 131
>gi|15029364|gb|AAK81856.1|AF394913_1 photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar]
Length = 662
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 76/129 (58%), Gaps = 6/129 (4%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
S D DLLCPIC +++++A +T CGH+FC+ CI + + CP C+ SL N +FPNF
Sbjct: 43 SEVDKDLLCPICMQIVKDAFLTACGHSFCYMCIITHLSNKSDCPCCAQSLSK-NQLFPNF 101
Query: 76 LLNELVQKHKI----KSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSV 131
LL++L++K KSA + R + + +S+ +++ +L +L ++K +E E +
Sbjct: 102 LLDKLLKKTSAQQISKSAPPVEHFRQAL-QQGCEVSIKELDTLLALLAEKKRKMEQEEAE 160
Query: 132 AQYKLLYEL 140
++L +
Sbjct: 161 RNMQILLDF 169
>gi|168044506|ref|XP_001774722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674022|gb|EDQ60537.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D CPIC + I +A +T CGH FC+SCI+ ++++ CP C+ L + PNFL +
Sbjct: 31 DKDFQCPICLQTIEDAFLTSCGHFFCYSCITTHLDIRSNCPSCARYLTS-EQLIPNFLFS 89
Query: 79 ELVQKHK----IKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K + S ++ LR + +L + D+N +L ++ +RK + E E +
Sbjct: 90 KLMKKTAASQLLDSTSSAEQLR-LALQQGADLPMKDLNSLLRLIGERKRIHEQEEAECNM 148
Query: 135 KLLYEL 140
++L +
Sbjct: 149 EILLDF 154
>gi|383210359|dbj|BAM08276.1| constitutive photomorphogenic 1 [Malus x domestica]
Length = 646
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 14/122 (11%)
Query: 18 PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLL 77
PD D+ CPIC ++IR+A +T CGH+FC CIS + ++ CP C++SL S+FPNFLL
Sbjct: 33 PDKDMKCPICMQIIRDACLTACGHSFCHVCISTHLRIKSDCPCCASSLTPA-SIFPNFLL 91
Query: 78 NELVQKHKIKSAQDSDGLRDF-VASESQN----LSLPDVNLMLEVLNQRKH---LLEAES 129
++L +K+ DS ++F + S N +S+ +++ +L +L +++ L EAE+
Sbjct: 92 DKL-----LKNVLDSRMAKNFELLSRKLNKGCEISIKELDGLLSLLEEKRRKMELQEAEN 146
Query: 130 SV 131
S+
Sbjct: 147 SM 148
>gi|383209880|dbj|BAM08275.1| constitutive photomorphogenic 1 [Malus x domestica]
Length = 646
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 14/122 (11%)
Query: 18 PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLL 77
PD D+ CPIC ++IR+A +T CGH+FC CIS + ++ CP C++SL S+FPNFLL
Sbjct: 33 PDKDMKCPICMQIIRDACLTACGHSFCHVCISTHLRIKSDCPCCASSLTPA-SIFPNFLL 91
Query: 78 NELVQKHKIKSAQDSDGLRDF-VASESQN----LSLPDVNLMLEVLNQRKH---LLEAES 129
++L +K+ DS ++F + S N +S+ +++ +L +L +++ L EAE+
Sbjct: 92 DKL-----LKNVLDSRMAKNFELLSRKLNKGCEISIKELDGLLSLLEEKRRKMELQEAEN 146
Query: 130 SV 131
S+
Sbjct: 147 SM 148
>gi|326499049|dbj|BAK06015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 693
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC LI++A +T CGH+FC+ CI + + CP C+ L ++PNFLL+
Sbjct: 65 DRDLLCPICMALIKDAFLTACGHSFCYMCIVTHLNHKSDCPCCANYLTKAQ-LYPNFLLD 123
Query: 79 ELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
++V+K K+A D R V + ++++ +++ ++ ++ ++K +E + S
Sbjct: 124 KVVKKMSARQVAKTASPIDQFR-HVVQQGNDMTVKELDGLMTLIAEKKRQMEQQESETNM 182
Query: 135 KLL 137
++L
Sbjct: 183 QIL 185
>gi|225447155|ref|XP_002271415.1| PREDICTED: E3 ubiquitin-protein ligase COP1 [Vitis vinifera]
gi|297739218|emb|CBI28869.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D LCPIC ++I++A +T CGH+FC+ CI ++ + CP C L + N +FPN LL+
Sbjct: 46 DKDSLCPICMQIIKDAFLTACGHSFCYMCIITHLQNKSDCPCCGVYLTN-NQLFPNRLLD 104
Query: 79 ELVQKHKIKS-AQDSDGLRDFVASESQN--LSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
+L++K + ++ + + F S Q +S+ +++ +L VL ++K +E + + K
Sbjct: 105 KLLKKTSAQQISKTASPVEQFHHSLEQGCEVSVKELDTLLSVLTEKKRKMEQDEAERNMK 164
Query: 136 LLYEL 140
+L E
Sbjct: 165 ILMEF 169
>gi|147825286|emb|CAN71084.1| hypothetical protein VITISV_028588 [Vitis vinifera]
Length = 676
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D LCPIC ++I++A +T CGH+FC+ CI ++ + CP C L + N +FPN LL+
Sbjct: 46 DKDSLCPICMQIIKDAFLTACGHSFCYMCIITHLQNKSDCPCCGVYLTN-NQLFPNRLLD 104
Query: 79 ELVQKHKIKS-AQDSDGLRDFVASESQN--LSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
+L++K + ++ + + F S Q +S+ +++ +L VL ++K +E + + K
Sbjct: 105 KLLKKTSAQQISKTASPVEQFHHSLEQGCEVSVKELDTLLSVLTEKKRKMEQDEAERNMK 164
Query: 136 LLYEL 140
+L E
Sbjct: 165 ILMEF 169
>gi|168040460|ref|XP_001772712.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675937|gb|EDQ62426.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 687
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 6/126 (4%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
++ S + R + D D LCPICF+ + +A +T CGH+FC++CI+ + + CP C+
Sbjct: 31 TSESVDVARASAGVDKDFLCPICFQTMEDAFVTNCGHSFCYTCITTHLNNRSNCPSCARY 90
Query: 65 LPDMNSVFPNFLLNELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQ 120
L + + PNFLL++L++K + + ++ LR + +L L D+ +L +L +
Sbjct: 91 LTSEH-LIPNFLLSKLLKKTVASQLLGISSPAEQLR-LALEQGADLPLKDLGSLLCLLGE 148
Query: 121 RKHLLE 126
RK LE
Sbjct: 149 RKRRLE 154
>gi|413939110|gb|AFW73661.1| ubiquitin ligase protein COP1 [Zea mays]
Length = 693
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
+A+++P + P D DLLCPIC +I++A +T CGH+FC+ CI + + CP C
Sbjct: 46 AASASPQGPAEEGEGPADRDLLCPICMAVIKDAFLTACGHSFCYMCIVTHLSNKSDCPCC 105
Query: 62 SASLPDMNSVFPNFLLNELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEV 117
L ++PNFLL+++++K K+A D R + + + +++ ++ +
Sbjct: 106 GHYLTKAQ-LYPNFLLDKVLKKISAQQIAKTASPIDQFR-CALQQGNEMGVKELDSLMTL 163
Query: 118 LNQRKHLLEAESSVAQYKLL 137
+ ++K +E + S ++L
Sbjct: 164 IAEKKRQMEQQESETNMQIL 183
>gi|226503711|ref|NP_001152482.1| ubiquitin ligase protein COP1 [Zea mays]
gi|195656705|gb|ACG47820.1| ubiquitin ligase protein COP1 [Zea mays]
Length = 693
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 6/140 (4%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
+A+++P + P D DLLCPIC +I++A +T CGH+FC+ CI + + CP C
Sbjct: 46 AASASPQGPAEEGEGPADRDLLCPICMAVIKDAFLTACGHSFCYMCIVTHLSNKSDCPCC 105
Query: 62 SASLPDMNSVFPNFLLNELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEV 117
L ++PNFLL+++++K K+A D R + + + +++ ++ +
Sbjct: 106 GHYLTKAQ-LYPNFLLDKVLKKISAQQIAKTASPIDQFR-CALQQGNEMGVKELDSLMTL 163
Query: 118 LNQRKHLLEAESSVAQYKLL 137
+ ++K +E + S ++L
Sbjct: 164 IAEKKRQMEQQESETNMQIL 183
>gi|242066674|ref|XP_002454626.1| hypothetical protein SORBIDRAFT_04g034480 [Sorghum bicolor]
gi|241934457|gb|EES07602.1| hypothetical protein SORBIDRAFT_04g034480 [Sorghum bicolor]
Length = 725
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
+A+++P P D DLLCPIC LI++A +T CGH+FC+ CI + + CP C
Sbjct: 48 AASASPQGPPAEDEGPADRDLLCPICMALIKDAFLTACGHSFCYMCIVTHLSNKSDCPCC 107
Query: 62 SASLPDMNSVFPNFLLNELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEV 117
L ++PNFLL+++++K K+A D R + + + +++ ++ +
Sbjct: 108 GHYLTKAQ-LYPNFLLDKVLKKISARQIAKTASPIDQFR-CALQQGNEMGVKELDSLMTL 165
Query: 118 LNQRKHLLEAESSVAQYKLL 137
+ ++K +E + S ++L
Sbjct: 166 IAEKKRQMEQQESETNMQIL 185
>gi|449513531|ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 670
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 9/141 (6%)
Query: 5 STPSRS--LKRQHSPPDN---DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
STPS S + HS D+ D+LCPIC ++I++A +T CGH+FC+ CI + + CP
Sbjct: 22 STPSSSPLYRPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP 81
Query: 60 KCSASLPDMNSVFPNFLLNELVQK---HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLE 116
C A NS+FPN LL++L++K +IK G + ++S+ D+ +L
Sbjct: 82 -CCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELLT 140
Query: 117 VLNQRKHLLEAESSVAQYKLL 137
+L ++K +E E + ++L
Sbjct: 141 LLTEKKRKMEQEEAETNMQIL 161
>gi|357493175|ref|XP_003616876.1| E3 ubiquitin-protein ligase COP1 [Medicago truncatula]
gi|355518211|gb|AES99834.1| E3 ubiquitin-protein ligase COP1 [Medicago truncatula]
Length = 761
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D LCPIC ++I++A +T CGH+FC+ CI + + CP C L + N +FPNFLL+
Sbjct: 47 DKDFLCPICMQIIKDAFLTSCGHSFCYMCIITHLRNKSDCPCCGHYLTNSN-LFPNFLLD 105
Query: 79 ELVQKHK----IKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K K+A + R + + +++ +++ +L +L ++K +E E +
Sbjct: 106 KLLKKTSDRQISKTASPVEHFRQAIQKGCE-VTMKELDTLLSLLAEKKRKMEQEEAERNM 164
Query: 135 KLLYEL 140
++L +
Sbjct: 165 QILLDF 170
>gi|327493249|gb|AEA86331.1| E3 ubiquitin-protein ligase COP1 [Solanum nigrum]
Length = 173
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D +LLCPIC ++I++A +T CGH+FC+ CI + + CP CS L + ++PNFLL+
Sbjct: 8 DRELLCPICMQIIKDAFLTACGHSFCYMCIVTHLHNKSDCPCCSHYLT-TSQLYPNFLLD 66
Query: 79 ELVQKHKIKS-AQDSDGLRDFVASESQN--LSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
+L++K + ++ + + F S Q +S+ +++ +L +L+++K LE E + +
Sbjct: 67 KLLKKTSARQISKTASPVEQFRHSLEQGCEVSIKELDALLSMLSEKKRKLEQEEAERNMQ 126
Query: 136 LLYEL 140
+L +
Sbjct: 127 ILLDF 131
>gi|359483452|ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 687
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 74/129 (57%), Gaps = 6/129 (4%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
S D DLLCPIC ++I++A +T CGH+FC+ CI + + CP C L N +FPNF
Sbjct: 56 SEVDKDLLCPICMQIIKDAFLTACGHSFCYMCIVTHLNNKNDCPCCGHFLT-TNHLFPNF 114
Query: 76 LLNELVQKHK----IKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSV 131
LLN+ ++K K+A + LR + + +S+ +++ ++ +L +++ +E E +
Sbjct: 115 LLNKFLRKTSARQIAKTATPFEHLRQAL-QQGCEVSVKELDSLMSLLVEKRRKMEQEEAE 173
Query: 132 AQYKLLYEL 140
++L +
Sbjct: 174 TNMQILLDF 182
>gi|307110243|gb|EFN58479.1| hypothetical protein CHLNCDRAFT_6949, partial [Chlorella
variabilis]
Length = 641
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
DL C IC E + + +T CGHTFC+ C+++ ++ CP CS L + ++PNFLL++
Sbjct: 1 QDLSCAICMETLSDPFVTACGHTFCYGCLTQSLQHNKHCPACSHYLT-TDLIYPNFLLSK 59
Query: 80 LVQKHKIKSAQDS----DGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
+V++ + ++ + L+ VA + L DV+++L+ L + K L+ + A +
Sbjct: 60 IVKQARSRAVGTPLSALELLQHAVADHKEGLKEEDVDVLLQQLWEHKQALQQQQREASME 119
Query: 136 LL 137
LL
Sbjct: 120 LL 121
>gi|255587080|ref|XP_002534127.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223525812|gb|EEF28255.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 677
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
+ D LCPIC ++I++A +T CGH+FC+ CI + + CP C+ L N +FPNFLL
Sbjct: 48 EKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCTHYLT-TNQLFPNFLLQ 106
Query: 79 ELVQKHKIK-SAQDSDGLRDFVASESQN--LSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
+L++K + +++ + + F + Q +S+ +++ ++ +L+++K +E E + +
Sbjct: 107 KLLKKASARQTSKTASPVEHFRHALQQGCEISIKELDTLMSMLSEKKRKMEQEEAERNMQ 166
Query: 136 LLYEL 140
+L +
Sbjct: 167 ILLDF 171
>gi|350537659|ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum]
gi|4090943|gb|AAC98912.1| COP1 homolog [Solanum lycopersicum]
Length = 677
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D +LLCPIC ++I++A +T CGH+FC+ CI + + CP CS L + ++PNFLL+
Sbjct: 46 DRELLCPICMQIIKDAFLTACGHSFCYMCIVTHLHNKSDCPCCSHYLT-TSQLYPNFLLD 104
Query: 79 ELVQKHKI----KSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K K+A + R + S+ +S+ +++ +L +L+++K LE E +
Sbjct: 105 KLLKKTSARQISKTASPVEQFRHSLEQGSE-VSIKELDALLLMLSEKKRKLEQEEAERNM 163
Query: 135 KLLYEL 140
++L +
Sbjct: 164 QILLDF 169
>gi|313231899|emb|CBY09011.1| unnamed protein product [Oikopleura dioica]
Length = 886
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
DL C IC + +E H+TRCGHTFC C+S+ + + KCPKC + N FPN +N++
Sbjct: 61 DLHCSICVSMFKEPHVTRCGHTFCRGCLSRSLAISPKCPKCDTPV-SRNDHFPNHAINDM 119
Query: 81 VQ-KHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLE 126
++ +H+ K + + D + + N+ + + +++ L +R+ ++E
Sbjct: 120 IRVRHRNKKHLEHMTI-DQIVNLPGNIPVDSITSIIDALQERREVIE 165
>gi|313217594|emb|CBY38656.1| unnamed protein product [Oikopleura dioica]
gi|313242948|emb|CBY39678.1| unnamed protein product [Oikopleura dioica]
Length = 608
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
DL C IC + +E H+TRCGHTFC C+S+ + + KCPKC + N FPN +N++
Sbjct: 61 DLHCSICVSMFKEPHVTRCGHTFCRGCLSRSLAISPKCPKCDTPVS-RNDHFPNHAINDM 119
Query: 81 VQ-KHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYE 139
++ +H+ K + + D + + N+ + + +++ L +R+ ++E +L+
Sbjct: 120 IRVRHRNKKHLEHMTI-DQIVNLPGNIPVDSITSIIDALQERREVIEDRQQCIHKHMLHH 178
Query: 140 L 140
Sbjct: 179 F 179
>gi|168002467|ref|XP_001753935.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694911|gb|EDQ81257.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 702
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 10/132 (7%)
Query: 15 HSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPN 74
+S D D LCPIC + +++A +T CGH+FC++CI+ + + CP C L + N +FPN
Sbjct: 46 NSDLDKDFLCPICIQTMKDACLTACGHSFCYACITTHLNNKKNCPCCGLYLTN-NQLFPN 104
Query: 75 FLLNELVQKHKI----KSAQDSDGLRDFVASESQNLSLPDVNL--MLEVLNQRKHLLEAE 128
FLLN+L+ K +A ++ LR + Q++ P + L ++ +L+++K E E
Sbjct: 105 FLLNKLLVKASASQLCSNASPAEHLR---LALQQDVDFPVIELDSLMHLLSEKKRKAEQE 161
Query: 129 SSVAQYKLLYEL 140
+ ++L E
Sbjct: 162 EAETNMEILLEF 173
>gi|302771373|ref|XP_002969105.1| hypothetical protein SELMODRAFT_451298 [Selaginella moellendorffii]
gi|300163610|gb|EFJ30221.1| hypothetical protein SELMODRAFT_451298 [Selaginella moellendorffii]
Length = 595
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
+ DL CP+CF+ +R+ +T CGH+FC+SC+S + + CP CS+ L ++PN LL
Sbjct: 50 EKDLSCPVCFQTLRDPFLTACGHSFCYSCVSTHLNGRSSCPCCSSYLT-TKLMYPNVLLG 108
Query: 79 ELVQK-HKIKS---AQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
++V++ +KS ++ LR + + ++SL +++ +L +L+ RK ++A+ A+
Sbjct: 109 KVVRELQTLKSLTRGSPTENLRVALQHGAHDMSLKEIDFLLNLLSDRK--MKAQHREAEE 166
Query: 135 KLLYEL 140
+ Y L
Sbjct: 167 NMDYLL 172
>gi|313217525|emb|CBY38605.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
DL C IC + +E H+TRCGHTFC C+S+ + + KCPKC + N FPN +N++
Sbjct: 61 DLHCSICVSMFKEPHVTRCGHTFCRGCLSRSLAISPKCPKCDTPVS-RNDHFPNHAINDM 119
Query: 81 VQ-KHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYE 139
++ +H+ K + + D + + N+ + + +++ L +R+ ++E +L+
Sbjct: 120 IRVRHRNKKHLEHMTI-DQIVNLPGNIPVDSIISIIDALQERREVIEDRQQCIHKHMLHH 178
Query: 140 L 140
Sbjct: 179 F 179
>gi|449455449|ref|XP_004145465.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 663
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 4/122 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D+LCPIC ++I++A +T CGH+FC+ CI + + CP C A NS+FPN LL+
Sbjct: 34 DKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCP-CCAHFLRSNSIFPNILLD 92
Query: 79 ELVQK---HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
+L++K +IK G + ++S+ D+ +L +L ++K +E E + +
Sbjct: 93 KLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQ 152
Query: 136 LL 137
+L
Sbjct: 153 IL 154
>gi|281205537|gb|EFA79727.1| hypothetical protein PPL_07418 [Polysphondylium pallidum PN500]
Length = 829
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 12/143 (8%)
Query: 3 ATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCS 62
+T+TP + K+ ++ L CPIC ++I+E IT+CGH+FC+ CI + Q CP C
Sbjct: 147 STTTPMNAQKQ----LEDTLSCPICLDIIKEPFITKCGHSFCYQCILVQLSKQSSCPLCM 202
Query: 63 ASLPDMNSVFPNFLLNELVQ-----KHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEV 117
L + +FPNF LN+ V+ H + + +++ES +S+ D+N M+
Sbjct: 203 HFLS-RDQIFPNFALNKFVETMSQTSHLVSTPPVKQLQHTLLSTES--ISINDINSMVAA 259
Query: 118 LNQRKHLLEAESSVAQYKLLYEL 140
L ++K L+E + + +L +
Sbjct: 260 LLEKKKLIELQDQQVELDILLDF 282
>gi|302784374|ref|XP_002973959.1| hypothetical protein SELMODRAFT_451299 [Selaginella moellendorffii]
gi|300158291|gb|EFJ24914.1| hypothetical protein SELMODRAFT_451299 [Selaginella moellendorffii]
Length = 634
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 67/108 (62%), Gaps = 5/108 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
+ DL CP+CF+ +R+ +T CGH+FC+SC+S + + CP CS+ L ++PN LL
Sbjct: 50 EKDLSCPVCFQTLRDPFLTACGHSFCYSCVSTHLNGRNSCPCCSSYLT-TKLMYPNVLLG 108
Query: 79 ELVQK-HKIKS---AQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRK 122
++V++ +KS ++ LR + + ++SL +++ +L +L+ RK
Sbjct: 109 KVVRELQTLKSLTRGSPTENLRVALQHGAHDMSLKEIDFLLNLLSDRK 156
>gi|7592844|dbj|BAA94422.1| COP1 [Oryza sativa Japonica Group]
Length = 685
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC +I++A +T CGH+FC+ CI + + CP C L ++PNFLL+
Sbjct: 55 DRDLLCPICMAVIKDAFLTACGHSFCYMCIVTHLSHKSDCPCCGNYLTKAQ-LYPNFLLD 113
Query: 79 ELVQKHK----IKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
++++K K+A D R + + ++++ +++ ++ ++ ++K +E + S
Sbjct: 114 KVLKKMSARQIAKTASPIDQFR-YALQQGNDMAVKELDSLMTLIAEKKRHMEQQESETNM 172
Query: 135 KLL 137
++L
Sbjct: 173 QIL 175
>gi|115448949|ref|NP_001048254.1| Os02g0771100 [Oryza sativa Japonica Group]
gi|16151847|gb|AAL14875.1| copI [Oryza sativa]
gi|46805327|dbj|BAD16846.1| COP1, constitutive photomorphogenesis 1 [Oryza sativa Japonica
Group]
gi|113537785|dbj|BAF10168.1| Os02g0771100 [Oryza sativa Japonica Group]
gi|215767107|dbj|BAG99335.1| unnamed protein product [Oryza sativa Japonica Group]
gi|333943945|dbj|BAK26796.1| E3 ubiquitin-protein ligase [Oryza sativa Japonica Group]
Length = 685
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC +I++A +T CGH+FC+ CI + + CP C L ++PNFLL+
Sbjct: 55 DRDLLCPICMAVIKDAFLTACGHSFCYMCIVTHLSHKSDCPCCGNYLTKAQ-LYPNFLLD 113
Query: 79 ELVQKHK----IKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
++++K K+A D R + + ++++ +++ ++ ++ ++K +E + S
Sbjct: 114 KVLKKMSARQIAKTASPIDQFR-YALQQGNDMAVKELDSLMTLIAEKKRHMEQQESETNM 172
Query: 135 KLL 137
++L
Sbjct: 173 QIL 175
>gi|413924381|gb|AFW64313.1| hypothetical protein ZEAMMB73_321715 [Zea mays]
Length = 489
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 3 ATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCS 62
A S + + P D DLLCPIC +I++A +T CGH+FC+ C+ + + CP C
Sbjct: 40 AASASPQGPAEEEGPADRDLLCPICMAVIKDAFLTACGHSFCYMCVVTHLSNKSDCPCCG 99
Query: 63 ASLPDMNSVFPNFLLNELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVL 118
L ++PNFLL+++++K K+A D R + + + +++ ++ ++
Sbjct: 100 HYLTKAQ-LYPNFLLDKVLKKISARQIAKTASPVDQFR-CALQQGNEMGVKELDSLMTLI 157
Query: 119 NQRKHLLEAESSVAQYKLL 137
++K +E + S ++L
Sbjct: 158 AEKKRQMEQQESETNMQIL 176
>gi|302774074|ref|XP_002970454.1| hypothetical protein SELMODRAFT_171333 [Selaginella moellendorffii]
gi|300161970|gb|EFJ28584.1| hypothetical protein SELMODRAFT_171333 [Selaginella moellendorffii]
Length = 646
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D CPIC + +++A +T CGH+FC+ CI + + CP C L + ++PNFLLN
Sbjct: 22 DKDFQCPICIQTMKDAFLTACGHSFCYMCIITHLNNKKNCPCCGVYLTS-SQLYPNFLLN 80
Query: 79 ELVQK---HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
++++K +I A ++ LR F + ++ L +++ +L +L+ +K E E + +
Sbjct: 81 KILKKVATSQISCASPTEQLR-FALQQGVDVPLKEIDSLLVLLSDKKRKAEHEEAEVNME 139
Query: 136 LLYEL 140
+L E
Sbjct: 140 VLLEF 144
>gi|302793522|ref|XP_002978526.1| hypothetical protein SELMODRAFT_176960 [Selaginella moellendorffii]
gi|300153875|gb|EFJ20512.1| hypothetical protein SELMODRAFT_176960 [Selaginella moellendorffii]
Length = 647
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D CPIC + +++A +T CGH+FC+ CI + + CP C L + ++PNFLLN
Sbjct: 22 DKDFQCPICIQTMKDAFLTACGHSFCYMCIITHLNNKKNCPCCGVYLTS-SQLYPNFLLN 80
Query: 79 ELVQK---HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYK 135
++++K +I A ++ LR F + ++ L +++ +L +L+ +K E E + +
Sbjct: 81 KILKKVATSQISCASPTEQLR-FALQQGVDVPLKEIDSLLVLLSDKKRKAEHEEAEVNME 139
Query: 136 LLYEL 140
+L E
Sbjct: 140 VLLEF 144
>gi|226501498|ref|NP_001145835.1| uncharacterized protein LOC100279342 [Zea mays]
gi|219884613|gb|ACL52681.1| unknown [Zea mays]
gi|413924382|gb|AFW64314.1| hypothetical protein ZEAMMB73_321715 [Zea mays]
Length = 655
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 3 ATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCS 62
A S + + P D DLLCPIC +I++A +T CGH+FC+ C+ + + CP C
Sbjct: 40 AASASPQGPAEEEGPADRDLLCPICMAVIKDAFLTACGHSFCYMCVVTHLSNKSDCPCCG 99
Query: 63 ASLPDMNSVFPNFLLNELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVL 118
L ++PNFLL+++++K K+A D R + + + +++ ++ ++
Sbjct: 100 HYLTKAQ-LYPNFLLDKVLKKISARQIAKTASPVDQFR-CALQQGNEMGVKELDSLMTLI 157
Query: 119 NQRKHLLEAESSVAQYKLL 137
++K +E + S ++L
Sbjct: 158 AEKKRQMEQQESETNMQIL 176
>gi|168013805|ref|XP_001759457.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689387|gb|EDQ75759.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 668
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 79/134 (58%), Gaps = 10/134 (7%)
Query: 13 RQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
R + D D LCPIC +++A +TRCGH FC+SCI ++ + CP C+ L ++ +
Sbjct: 23 RARANMDRDFLCPICLHTMKDAFLTRCGHNFCYSCIMTHLKNRNNCPCCAQYLT-IDLLM 81
Query: 73 PNFLL----NELVQKHKIKSAQDSDGLRDFVASESQNLSLP--DVNLMLEVLNQRKHLLE 126
PNFLL NEL +K+A ++ LR +A E Q+ LP +++ +L +LN+RK L+
Sbjct: 82 PNFLLTKLMNELSASMMLKNASPAEQLR--LALE-QDADLPPKELDSLLLLLNERKQKLD 138
Query: 127 AESSVAQYKLLYEL 140
E + +++++
Sbjct: 139 REEAEINTEIIFDF 152
>gi|8574407|emb|CAB94800.1| COP1 regulatory protein [Pisum sativum]
Length = 970
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
S D D LCPIC ++I++A +T CGH+FC+ CI + + CP C L + N +FPNF
Sbjct: 39 SDLDKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSN-LFPNF 97
Query: 76 LLNELVQK 83
LL++L++K
Sbjct: 98 LLDKLLKK 105
>gi|7688065|emb|CAB89694.1| constitutively photomorphogenic 1 protein [Pisum sativum]
Length = 968
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D LCPIC ++I++A +T CGH+FC+ CI + + CP C L + N +FPNFLL+
Sbjct: 42 DKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSN-LFPNFLLD 100
Query: 79 ELVQK 83
+L++K
Sbjct: 101 KLLKK 105
>gi|148701481|gb|EDL33428.1| mCG1049275 [Mus musculus]
Length = 90
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 25 PICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKH 84
PICF + EA++T+CG +FC++CI + +E +CPKC+ + +++ ++PNFL+NEL+ K
Sbjct: 1 PICFGMTEEAYMTKCGLSFCYNCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ 60
Query: 85 KIKSAQDSDGLRDFVAS 101
K + + L V+S
Sbjct: 61 KQRFEEKRFKLDHSVSS 77
>gi|3121867|sp|P93471.1|COP1_PEA RecName: Full=E3 ubiquitin-protein ligase COP1; AltName:
Full=Constitutive photomorphogenesis protein 1
gi|1694900|emb|CAA70768.1| Cop1 protein [Pisum sativum]
gi|8574409|emb|CAB94801.1| COP1 regulatory protein [Pisum sativum]
Length = 672
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D LCPIC ++I++A +T CGH+FC+ CI + + CP C L + N +FPNFLL+
Sbjct: 42 DKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSN-LFPNFLLD 100
Query: 79 ELVQK 83
+L++K
Sbjct: 101 KLLKK 105
>gi|7688063|emb|CAB89693.1| constitutively photomorphogenic 1 protein [Pisum sativum]
Length = 675
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D D LCPIC ++I++A +T CGH+FC+ CI + + CP C L + N +FPNFLL+
Sbjct: 42 DKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSN-LFPNFLLD 100
Query: 79 ELVQK 83
+L++K
Sbjct: 101 KLLKK 105
>gi|413939109|gb|AFW73660.1| hypothetical protein ZEAMMB73_704258 [Zea mays]
Length = 163
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
+A+++P + P D DLLCPIC +I++A +T CGH+FC+ CI + + CP C
Sbjct: 46 AASASPQGPAEEGEGPADRDLLCPICMAVIKDAFLTACGHSFCYMCIVTHLSNKSDCPCC 105
Query: 62 SASLPDMNSVFPNFLLNELVQK 83
L ++PNFLL+++++K
Sbjct: 106 GHYLTKAQ-LYPNFLLDKVLKK 126
>gi|344240054|gb|EGV96157.1| E3 ubiquitin-protein ligase RFWD2 [Cricetulus griseus]
Length = 556
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 16/112 (14%)
Query: 45 FSCISKCVE-LQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIK----------SAQDSD 93
+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K K + S ++
Sbjct: 1 YKCIHQSLEDNNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTN 60
Query: 94 GLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
G R D + ++ NL L +VNLMLE+L Q+K LEAES AQ ++L E
Sbjct: 61 GHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEF 112
>gi|357137921|ref|XP_003570547.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Brachypodium
distachyon]
Length = 670
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 69/120 (57%), Gaps = 6/120 (5%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
LLCPIC +I++A +T CGH+FC+ CI + + CP C L ++PNFLL+++V
Sbjct: 74 LLCPICMGVIKDAFLTACGHSFCYMCIVTHLGHKSDCPCCGNYLTKAQ-LYPNFLLDKVV 132
Query: 82 QKHK----IKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLL 137
+K K+A D R V + ++++ +++ ++ ++ ++K +E + S ++L
Sbjct: 133 KKMSARQIAKTASPVDQFR-HVVQQGNDMTVKELDSLMTLIAEKKRQMEQQESETNMQIL 191
>gi|330793214|ref|XP_003284680.1| hypothetical protein DICPUDRAFT_45662 [Dictyostelium purpureum]
gi|325085378|gb|EGC38786.1| hypothetical protein DICPUDRAFT_45662 [Dictyostelium purpureum]
Length = 629
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 30 LIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIKS- 88
+I+E IT+CGH+FC+ CI++ + CP C L +FPNF LN VQK IK+
Sbjct: 1 MIKEPFITKCGHSFCYQCITQHLTNSKTCPFCMMFLT-REQIFPNFALNSFVQKVGIKTN 59
Query: 89 ---AQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
+ LR+ + +E SL D+NLM+ L ++K LE + ++ +L +
Sbjct: 60 LLPSPSFKQLRNTLTNEK--FSLQDINLMVNTLLEKKKSLELQDQQVEFDILLDF 112
>gi|125583833|gb|EAZ24764.1| hypothetical protein OsJ_08537 [Oryza sativa Japonica Group]
Length = 685
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC +I++A +T CG +FC+ CI + + CP C L ++PNFLL+
Sbjct: 55 DRDLLCPICMAVIKDAFLTACGQSFCYMCIVTHLSHKSDCPCCGNYLTKAQ-LYPNFLLD 113
Query: 79 ELVQKHK----IKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
++++K K+A D R + + ++++ +++ ++ ++ ++K +E + S
Sbjct: 114 KVLKKMSARQIAKTASPIDQFR-YALQQGNDMAVKELDSLMTLIAEKKRHMEQQESETNM 172
Query: 135 KLL 137
++L
Sbjct: 173 QIL 175
>gi|27357054|gb|AAN86553.1| COP1 [Brassica rapa subsp. pekinensis]
Length = 254
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 25 PICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK- 83
PIC ++I++A +T CGH+FC+ CI + + CP CS L ++PNFLL++L++K
Sbjct: 2 PICMQIIKDAFLTSCGHSFCYMCIVTHLHNKSDCPCCSHYLTTAQ-LYPNFLLDKLLKKT 60
Query: 84 --HKI-KSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
H+I K+A + R + + + +S+ +++++ +L ++K LE E + ++L E
Sbjct: 61 SAHQISKTASPVEQFRHSI-EQGREVSIKELDVLSTILAEKKRKLEQEEAERNMQILLEF 119
>gi|356501265|ref|XP_003519446.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Glycine max]
Length = 669
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 74/129 (57%), Gaps = 6/129 (4%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
S PD D LCPIC ++I++ +T CGH+FC+ CI + + CP C L + N +FPN
Sbjct: 36 SEPDKDFLCPICMQIIKDPFLTACGHSFCYMCIITHLRNKSDCPCCGDYLTNTN-LFPNL 94
Query: 76 LLNELVQ----KHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSV 131
LL++L++ + K+A + R V + ++S+ +++ +L +L ++K +E E +
Sbjct: 95 LLDKLLKKTSARQISKTASPVEHFRQ-VLQKGSDVSIKELDTLLSLLAEKKRKMEQEEAE 153
Query: 132 AQYKLLYEL 140
++L +
Sbjct: 154 RNMQILLDF 162
>gi|171688350|ref|XP_001909115.1| hypothetical protein [Podospora anserina S mat+]
gi|170944137|emb|CAP70247.1| unnamed protein product [Podospora anserina S mat+]
Length = 961
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
CP+CFE+++ IT C H FC CISK +E+Q KCP C ASL + N V P
Sbjct: 719 CPVCFEVMKSPVITHCKHAFCRPCISKVIEIQGKCPMCRASLSEDNLVEP 768
>gi|340374691|ref|XP_003385871.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Amphimedon
queenslandica]
Length = 616
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
+D++CP+CF++ +T CGH+FC CI K + +CP C L + PNF LN+
Sbjct: 21 SDVICPVCFDIFTSVQVTVCGHSFCHECIHKSIAQTQQCPICGTKLSRDSGFAPNFSLND 80
Query: 80 LVQK 83
+V K
Sbjct: 81 IVAK 84
>gi|402590837|gb|EJW84767.1| hypothetical protein WUBG_04321 [Wuchereria bancrofti]
Length = 234
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS--VFPNFLLNELV 81
CPICF+L RE + T CGH+FC CIS +E ++CP CS L + VFPNF +V
Sbjct: 67 CPICFQLFREPYSTLCGHSFCRECISAHLERSLRCPVCSQGLDPRSGPIVFPNFTAASIV 126
Query: 82 Q--KHKIKSAQDSDGLRDFVASESQNLSL 108
+ +K+A R+ A+ +N L
Sbjct: 127 DAIRRNMKTA------RNLAAASGRNEGL 149
>gi|312079151|ref|XP_003142050.1| hypothetical protein LOAG_06466 [Loa loa]
Length = 631
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS--VFPNFLLNELV 81
CPICF+L RE + T CGH+FC CIS +E ++CP CS L + VFPNF +V
Sbjct: 67 CPICFQLFREPYSTLCGHSFCRECISAHLERSLRCPVCSRGLDPRSGPIVFPNFTAASIV 126
Query: 82 Q--KHKIKSAQDSDGLRDFVASESQNLSL 108
+ +K+A R A+ +N L
Sbjct: 127 DAIRRNMKTA------RSLTAASGRNEGL 149
>gi|393911986|gb|EJD76534.1| hypothetical protein LOAG_16547 [Loa loa]
Length = 235
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS--VFPNFLLNELV 81
CPICF+L RE + T CGH+FC CIS +E ++CP CS L + VFPNF +V
Sbjct: 67 CPICFQLFREPYSTLCGHSFCRECISAHLERSLRCPVCSRGLDPRSGPIVFPNFTAASIV 126
Query: 82 Q--KHKIKSAQDSDGLRDFVASESQNLSL 108
+ +K+A R A+ +N L
Sbjct: 127 DAIRRNMKTA------RSLTAASGRNEGL 149
>gi|169601474|ref|XP_001794159.1| hypothetical protein SNOG_03602 [Phaeosphaeria nodorum SN15]
gi|111067687|gb|EAT88807.1| hypothetical protein SNOG_03602 [Phaeosphaeria nodorum SN15]
Length = 986
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS----------VFP 73
CPIC + ++E IT+C HTFC +CI + +E+Q KCP C A L ++S V P
Sbjct: 703 CPICLDTLKEPVITKCAHTFCTACIERVIEVQKKCPMCRAELESLSSTTVKPAVETTVKP 762
Query: 74 NFLLNELVQKHKIKSAQDS--DGLRDFVASESQNLS 107
++L ++ S + L D + + SQ+ S
Sbjct: 763 ELTQDQLADAASLEQNTSSKVEALLDILKATSQDPS 798
>gi|148671303|gb|EDL03250.1| mCG1026141 [Mus musculus]
Length = 90
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 44/61 (72%)
Query: 25 PICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKH 84
PICF++ EA++T+CG +FC+ CI + +E +C K + + +++ ++PNFL+NEL+ K
Sbjct: 1 PICFDMTEEAYMTKCGLSFCYKCIPQSLEDNNRCTKYNYVVDNIDHLYPNFLVNELILKQ 60
Query: 85 K 85
K
Sbjct: 61 K 61
>gi|367046342|ref|XP_003653551.1| RAD5-like protein [Thielavia terrestris NRRL 8126]
gi|347000813|gb|AEO67215.1| RAD5-like protein [Thielavia terrestris NRRL 8126]
Length = 908
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 11/73 (15%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK 83
CPIC + +++A IT C H FC +CISK +E+Q KCP C A L + ++LV+
Sbjct: 666 CPICIDTLKDAVITHCKHVFCRACISKVIEIQHKCPMCRAGLSE----------DKLVEP 715
Query: 84 HKIKS-AQDSDGL 95
+S A+D DGL
Sbjct: 716 APERSAAEDGDGL 728
>gi|194041539|ref|XP_001928415.1| PREDICTED: tripartite motif-containing protein 35 [Sus scrofa]
Length = 493
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 14/86 (16%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CP 59
+A+ PSRS K +LLC +C++ R+A RCGH FC C+++C E+Q+ CP
Sbjct: 6 AASPGPSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRGCVTRCWEVQVAPTCP 58
Query: 60 KCS--ASLPDMNSVFPNFLLNELVQK 83
C A+ D+ PN LN LV+K
Sbjct: 59 VCKDRAAPSDLR---PNHTLNNLVEK 81
>gi|301757238|ref|XP_002914463.1| PREDICTED: tripartite motif-containing protein 35-like
[Ailuropoda melanoleuca]
gi|281347187|gb|EFB22771.1| hypothetical protein PANDA_002358 [Ailuropoda melanoleuca]
Length = 493
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCS-- 62
PSRS K + LLC +C++ R+A RCGH FC C+++C E+Q+ CP C
Sbjct: 11 PSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVTRCWEVQVAPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
ASL D+ + N LN LV+K
Sbjct: 64 ASLADLRT---NHTLNNLVEK 81
>gi|403292431|ref|XP_003937251.1| PREDICTED: tripartite motif-containing protein 35 [Saimiri
boliviensis boliviensis]
Length = 493
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 14/85 (16%)
Query: 3 ATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPK 60
A+ PSRS K + LLC +C++ R+A RCGH FC C+S+C E+Q+ CP
Sbjct: 7 ASPGPSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPV 59
Query: 61 CS--ASLPDMNSVFPNFLLNELVQK 83
C AS D+ + N LN LV+K
Sbjct: 60 CKDRASPADLRT---NHTLNNLVEK 81
>gi|441621561|ref|XP_004088756.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing protein
35 [Nomascus leucogenys]
Length = 766
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K + LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 284 PSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 336
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 337 ASPADLRT---NHTLNNLVEK 354
>gi|410956426|ref|XP_003984843.1| PREDICTED: tripartite motif-containing protein 35 [Felis catus]
Length = 493
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCS-- 62
PSRS K + LLC +C++ R+A RCGH FC C+++C E+Q+ CP C
Sbjct: 11 PSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVTRCWEVQVTPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
A+L D+ + N LN LV+K
Sbjct: 64 AALADLRT---NHTLNNLVEK 81
>gi|355697821|gb|EHH28369.1| hypothetical protein EGK_18795 [Macaca mulatta]
Length = 493
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K +LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 11 PSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRK 122
AS D+ + N LN LV+K ++++G R S+ LP N+ L L ++
Sbjct: 64 ASPADLRT---NHTLNNLVEK---LLREEAEGARWTSYRFSRVCPLPRGNISLFCLEDKE 117
Query: 123 HL 124
L
Sbjct: 118 LL 119
>gi|345790523|ref|XP_543229.3| PREDICTED: tripartite motif-containing protein 35 [Canis lupus
familiaris]
Length = 493
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCS-- 62
PSRS K + LLC +C++ R+A RCGH FC C+++C E+Q+ CP C
Sbjct: 11 PSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVTRCWEVQVAPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
A+L D+ + N LN LV+K
Sbjct: 64 AALADLRT---NHTLNNLVEK 81
>gi|296221695|ref|XP_002756908.1| PREDICTED: tripartite motif-containing protein 35 [Callithrix
jacchus]
Length = 515
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K + LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 33 PSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 85
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 86 ASPADLRT---NHTLNNLVEK 103
>gi|324507138|gb|ADY43033.1| E3 ubiquitin-protein ligase RFWD2 [Ascaris suum]
Length = 646
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS--VFPNFLLNELV 81
CPIC +L RE + T CGH+FC CIS +E +CP CS L + VFPNF +
Sbjct: 53 CPICLQLFREPYSTICGHSFCRECISAHLERCSRCPICSRELDTASGPIVFPNFTAAAIA 112
Query: 82 QK--------HKIKSAQD-----SDGLRDFVASESQNLSLPDVNLMLEVLNQRK 122
I+SA + S+G D + + +L ++ +++VL +R+
Sbjct: 113 DSIRSKTRMVRSIRSAAEGCGIASEGTSDELVDLAMSLDASSIDRVMDVLRKRR 166
>gi|5689533|dbj|BAA83050.1| KIAA1098 protein [Homo sapiens]
Length = 504
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K +LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 22 PSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 74
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 75 ASPADLRT---NHTLNNLVEK 92
>gi|383873336|ref|NP_001244485.1| tripartite motif-containing protein 35 [Macaca mulatta]
gi|402877854|ref|XP_003902627.1| PREDICTED: tripartite motif-containing protein 35 [Papio anubis]
gi|380785607|gb|AFE64679.1| tripartite motif-containing protein 35 isoform 2 [Macaca mulatta]
gi|383413299|gb|AFH29863.1| tripartite motif-containing protein 35 isoform 2 [Macaca mulatta]
Length = 493
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K +LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 11 PSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 64 ASPADLRT---NHTLNNLVEK 81
>gi|94536782|ref|NP_741983.2| tripartite motif-containing protein 35 [Homo sapiens]
gi|114619616|ref|XP_519674.2| PREDICTED: tripartite motif-containing protein 35 [Pan
troglodytes]
gi|397521543|ref|XP_003830853.1| PREDICTED: tripartite motif-containing protein 35 [Pan paniscus]
gi|56404980|sp|Q9UPQ4.2|TRI35_HUMAN RecName: Full=Tripartite motif-containing protein 35; AltName:
Full=Hemopoietic lineage switch protein 5
gi|29468276|gb|AAO85480.1| hemopoeitic lineage switch gene 5 [Homo sapiens]
gi|46812663|gb|AAH69226.1| Tripartite motif-containing 35 [Homo sapiens]
gi|119583962|gb|EAW63558.1| tripartite motif-containing 35, isoform CRA_b [Homo sapiens]
gi|167773751|gb|ABZ92310.1| tripartite motif-containing 35 [synthetic construct]
gi|168269684|dbj|BAG09969.1| tripartite motif-containing protein 35 [synthetic construct]
gi|410219014|gb|JAA06726.1| tripartite motif containing 35 [Pan troglodytes]
gi|410251962|gb|JAA13948.1| tripartite motif containing 35 [Pan troglodytes]
gi|410295258|gb|JAA26229.1| tripartite motif containing 35 [Pan troglodytes]
gi|410339635|gb|JAA38764.1| tripartite motif containing 35 [Pan troglodytes]
Length = 493
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K +LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 11 PSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 64 ASPADLRT---NHTLNNLVEK 81
>gi|197099236|ref|NP_001125511.1| tripartite motif-containing protein 35 [Pongo abelii]
gi|75061896|sp|Q5RBG2.1|TRI35_PONAB RecName: Full=Tripartite motif-containing protein 35
gi|55728307|emb|CAH90898.1| hypothetical protein [Pongo abelii]
Length = 492
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K +LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 11 PSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 64 ASPADLRT---NHTLNNLVEK 81
>gi|119583963|gb|EAW63559.1| tripartite motif-containing 35, isoform CRA_c [Homo sapiens]
Length = 335
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K +LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 11 PSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 64 ASPADLRT---NHTLNNLVEK 81
>gi|355779594|gb|EHH64070.1| hypothetical protein EGM_17191 [Macaca fascicularis]
Length = 493
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K +LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 11 PSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 64 ASPADLRT---NHTLNNLVEK 81
>gi|395842525|ref|XP_003794068.1| PREDICTED: tripartite motif-containing protein 35 [Otolemur
garnettii]
Length = 491
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 18/107 (16%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCS-- 62
PSRS K +LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 11 PSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRECVSRCWEVQVVPACPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLP 109
AS D+ + N LN LV+K + A+ + + SQ L P
Sbjct: 64 ASPSDLRT---NHTLNNLVEKLLHEEAEGA----PWTGRHSQRLCRP 103
>gi|17390786|gb|AAH18337.1| TRIM35 protein [Homo sapiens]
gi|119583961|gb|EAW63557.1| tripartite motif-containing 35, isoform CRA_a [Homo sapiens]
Length = 206
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K +LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 11 PSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 64 ASPADLRT---NHTLNNLVEK 81
>gi|302422820|ref|XP_003009240.1| transcription termination factor 2 [Verticillium albo-atrum
VaMs.102]
gi|261352386|gb|EEY14814.1| transcription termination factor 2 [Verticillium albo-atrum
VaMs.102]
Length = 924
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK 83
CP+CF+ + E IT C H +C CI+K VELQ KCP C +L N LL ++
Sbjct: 698 CPVCFDTLSEPVITHCKHVYCRRCITKVVELQRKCPMCRQTLGMEN------LLEPAPEE 751
Query: 84 HKIKSAQDSDGLRDFVASESQNL 106
+ A DG DF +S+++ L
Sbjct: 752 GQDDDANAFDG--DFKSSKTEAL 772
>gi|409081204|gb|EKM81563.1| hypothetical protein AGABI1DRAFT_69859, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 1635
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 6 TPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSA-- 63
+P + + P L+CPIC + + A +T CGH FC CI++ + Q +CP C A
Sbjct: 1550 SPEAEVTEPPASPGGQLICPICRQFPQHAVVTNCGHLFCMRCINQTITNQRRCPICRAPV 1609
Query: 64 SLPDMNSVFPNFLLNELVQKHKIKSAQD 91
S + + P+F+ ++ Q H + D
Sbjct: 1610 SRAQLRQIRPSFVASD--QDHTQQGHAD 1635
>gi|291395916|ref|XP_002714371.1| PREDICTED: tripartite motif protein 31 [Oryctolagus cuniculus]
Length = 666
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 11 LKRQHSPPD--NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASL 65
+ RQ SP D +++CPIC E+++E T CGH FC CI++ E KCP C++S+
Sbjct: 1 MARQQSPMDLQQEVICPICLEILQEPVTTDCGHNFCLQCITQVAEASGDFFKCPLCNSSV 60
Query: 66 PDMNSVFPNFLLNELVQK 83
N+ N+LL LV +
Sbjct: 61 -RKNAFTLNWLLVNLVDR 77
>gi|449303670|gb|EMC99677.1| hypothetical protein BAUCODRAFT_101663 [Baudoinia compniacensis
UAMH 10762]
Length = 933
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 27/44 (61%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
CP+C E + E IT C H F CISK +E Q KCP C A LPD
Sbjct: 683 CPVCLESLHEPVITTCAHVFGRECISKVIETQHKCPMCRADLPD 726
>gi|226528685|ref|NP_001148999.1| ubiquitin-protein ligase/ zinc ion binding protein [Zea mays]
gi|195623858|gb|ACG33759.1| ubiquitin-protein ligase/ zinc ion binding protein [Zea mays]
gi|223974557|gb|ACN31466.1| unknown [Zea mays]
Length = 197
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
P + CPIC+ + E T CGH FC +CI + +++Q KCP C L MNSV FL
Sbjct: 134 PKEPSFTCPICWNKMEEPSTTTCGHIFCDTCIKQAIKVQKKCPTCRKGL-KMNSVHRIFL 192
Query: 77 LN 78
N
Sbjct: 193 PN 194
>gi|449017032|dbj|BAM80434.1| photoregulatory zinc-finger protein COP1 [Cyanidioschyzon merolae
strain 10D]
Length = 855
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 28/50 (56%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
P L CPICF+L R A TRCGHTFCFSCI + CP C L
Sbjct: 103 GPALKSLECPICFDLFRAAVTTRCGHTFCFSCIMRHFRNHKSCPVCGGFL 152
>gi|326679511|ref|XP_003201315.1| PREDICTED: tripartite motif-containing protein 16 [Danio rerio]
Length = 547
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFP 73
D + +CPIC +L+++ CGH+FC SCI+ C L+ CP+C + ++
Sbjct: 7 DQEFICPICLDLLKDPVTISCGHSFCMSCITDCWNLEDQKRVYSCPQCRRTFTPRPALGK 66
Query: 74 NFLLNELVQKHKIKSAQDSD 93
N +L E+++K K Q +D
Sbjct: 67 NVMLAEMLEKLKTTRLQTAD 86
>gi|212721236|ref|NP_001132715.1| uncharacterized protein LOC100194198 [Zea mays]
gi|194695182|gb|ACF81675.1| unknown [Zea mays]
Length = 198
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
P + CPIC+ + E T CGH FC +CI + +++Q KCP C L MNSV +L
Sbjct: 135 PEEPSFTCPICWNKMEEPSTTTCGHVFCDTCIKQAIKVQKKCPTCRKGL-KMNSVHRIYL 193
Query: 77 LN 78
N
Sbjct: 194 PN 195
>gi|291385857|ref|XP_002709353.1| PREDICTED: tripartite motif-containing 35 [Oryctolagus cuniculus]
Length = 777
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCS-- 62
PSRS K + LLC +C++ R+A CGH FC C+S+C E+Q+ CP C
Sbjct: 295 PSRSFKEE-------LLCAVCYDPFRDAVTLHCGHNFCRGCVSRCWEVQVTPTCPVCKDR 347
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 348 ASPADLRT---NHTLNNLVEK 365
>gi|194705038|gb|ACF86603.1| unknown [Zea mays]
gi|195626322|gb|ACG34991.1| ubiquitin-protein ligase/ zinc ion binding protein [Zea mays]
gi|414589889|tpg|DAA40460.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414589890|tpg|DAA40461.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
gi|414589891|tpg|DAA40462.1| TPA: putative RING zinc finger domain superfamily protein isoform 3
[Zea mays]
Length = 198
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
P + CPIC+ + E T CGH FC +CI + +++Q KCP C L MNSV +L
Sbjct: 135 PEEPSFTCPICWNKMEEPSTTTCGHVFCDTCIKQAIKVQKKCPTCRKGL-KMNSVHRIYL 193
Query: 77 LN 78
N
Sbjct: 194 PN 195
>gi|414589892|tpg|DAA40463.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 202
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
P + CPIC+ + E T CGH FC +CI + +++Q KCP C L MNSV +L
Sbjct: 139 PEEPSFTCPICWNKMEEPSTTTCGHVFCDTCIKQAIKVQKKCPTCRKGL-KMNSVHRIYL 197
Query: 77 LN 78
N
Sbjct: 198 PN 199
>gi|431901225|gb|ELK08291.1| Tripartite motif-containing protein 35 [Pteropus alecto]
Length = 493
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCS-- 62
PSRS K + LLC +C++ R+A RCGH FC C+++C E+Q+ CP C
Sbjct: 11 PSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVTRCWEVQVAPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
A+ D+ + N LN LV+K
Sbjct: 64 AAPADLRT---NHTLNNLVEK 81
>gi|452821129|gb|EME28163.1| E3 ubiquitin-protein ligase RFWD2 [Galdieria sulphuraria]
Length = 541
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQ 82
CPICF ++++ +T C HTFC+ CISK +E + CP C L M+ + PN+ ++E V+
Sbjct: 33 CPICFTTLKDSFVTPCQHTFCYECISKHLETKSSCPSCGRYLV-MSLLKPNYEVDEAVK 90
>gi|116196848|ref|XP_001224236.1| hypothetical protein CHGG_05022 [Chaetomium globosum CBS 148.51]
gi|88180935|gb|EAQ88403.1| hypothetical protein CHGG_05022 [Chaetomium globosum CBS 148.51]
Length = 819
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
CP+C E + + IT C H+FC +CIS+ +E+Q KCP C A L + V P
Sbjct: 599 CPVCMEHLTDPVITHCKHSFCRACISRVIEIQHKCPMCRAELAEDKLVEP 648
>gi|344281291|ref|XP_003412413.1| PREDICTED: tripartite motif-containing protein 35 [Loxodonta
africana]
Length = 493
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 14/86 (16%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
+A+ PSRS K +LLC IC++ R+A RCGH FC C+++ E+Q+ CP
Sbjct: 6 AASPGPSRSFK-------EELLCAICYDPFRDAVTLRCGHNFCRMCVTRSWEVQVAPTCP 58
Query: 60 KCS--ASLPDMNSVFPNFLLNELVQK 83
C AS D+ + N LN LV+K
Sbjct: 59 VCKDRASPADLRT---NHTLNNLVEK 81
>gi|303272107|ref|XP_003055415.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463389|gb|EEH60667.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 669
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ CPIC E +A T CGHTFC++CI + + CP C+ L S+FPN L+
Sbjct: 13 DDSHACPICRETFSDAFNTMCGHTFCYACIVEHLARAHACPCCAQPL-TAESLFPNLALD 71
Query: 79 ELVQK 83
+L+++
Sbjct: 72 KLLKQ 76
>gi|76624864|ref|XP_596498.2| PREDICTED: tripartite motif-containing protein 35 [Bos taurus]
gi|297478087|ref|XP_002689839.1| PREDICTED: tripartite motif-containing protein 35 [Bos taurus]
gi|296484563|tpg|DAA26678.1| TPA: tripartite motif-containing 11-like [Bos taurus]
Length = 493
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 14/86 (16%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CP 59
+A+ PSRS K +LLC +C++ R+A RCGH FC C+++ E+Q+ CP
Sbjct: 6 AASPGPSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRGCVTRSWEVQVAPTCP 58
Query: 60 KCS--ASLPDMNSVFPNFLLNELVQK 83
C A+ D+ + N LN LV+K
Sbjct: 59 VCKDRAAPADLRT---NHTLNNLVEK 81
>gi|367023136|ref|XP_003660853.1| RAD5-like protein [Myceliophthora thermophila ATCC 42464]
gi|347008120|gb|AEO55608.1| RAD5-like protein [Myceliophthora thermophila ATCC 42464]
Length = 788
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
CP+C E + E IT C H FC +CI K +E+Q KCP C A L + V P
Sbjct: 548 CPVCMEPLTEPVITHCKHFFCRACICKVIEIQHKCPMCRAGLAEDKLVEP 597
>gi|346970399|gb|EGY13851.1| DNA repair protein RAD16 [Verticillium dahliae VdLs.17]
Length = 931
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
CPICF+ + E IT C H +C CI+K +ELQ KCP C L
Sbjct: 705 CPICFDTLSEPVITHCKHVYCRRCITKVIELQRKCPMCRQPL 746
>gi|414886181|tpg|DAA62195.1| TPA: putative RING zinc finger domain superfamily protein,
partial [Zea mays]
Length = 102
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
P + CPIC+ + E T CGH FC +CI + +++Q KCP C L MNSV FL
Sbjct: 39 PKEPSFTCPICWNKMEEPSTTTCGHIFCDTCIKQAIKVQKKCPTCRKGL-KMNSVHRIFL 97
Query: 77 LN 78
N
Sbjct: 98 PN 99
>gi|303318791|ref|XP_003069395.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109081|gb|EER27250.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 956
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM-NSVFPNFLLNE 79
CPIC + + + IT C HTF +SCI + +E Q KCP C A L D N V P L E
Sbjct: 714 CPICLDSLDQPVITACAHTFDYSCIEQVIERQHKCPLCRAELADTSNLVHPAVALGE 770
>gi|320034534|gb|EFW16478.1| helicase SWR1 [Coccidioides posadasii str. Silveira]
Length = 957
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM-NSVFPNFLLNE 79
CPIC + + + IT C HTF +SCI + +E Q KCP C A L D N V P L E
Sbjct: 715 CPICLDSLDQPVITACAHTFDYSCIEQVIERQHKCPLCRAELADTSNLVHPAVALGE 771
>gi|426222223|ref|XP_004005298.1| PREDICTED: tripartite motif-containing protein 35 [Ovis aries]
Length = 493
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 14/81 (17%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCS-- 62
PSRS K + LLC +C++ R+A RCGH FC C+++C E+Q+ CP C
Sbjct: 11 PSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVTRCWEVQVAPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
A+ D+ + N LN L +K
Sbjct: 64 AAPADLRT---NHTLNNLAEK 81
>gi|392865002|gb|EAS30739.2| DNA repair and recombination protein RAD5B [Coccidioides immitis
RS]
Length = 900
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM-NSVFPNFLLNE 79
CPIC + + + IT C HTF +SCI + +E Q KCP C A L D N V P L E
Sbjct: 658 CPICLDSLDQPVITACAHTFDYSCIEQVIERQHKCPLCRAELADTSNLVHPAVALGE 714
>gi|327266538|ref|XP_003218061.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 463
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPKCSASLPDMNSVFPNFL 76
N+ CPIC + R+ IT CGH FC SCI++C E K CP+C + +N V PN
Sbjct: 13 NEAECPICLDYFRDPVITECGHNFCLSCITRCWEGSEKAASCPQCREKIQKIN-VKPNRK 71
Query: 77 LNELVQ 82
L V+
Sbjct: 72 LASFVE 77
>gi|238494326|ref|XP_002378399.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357]
gi|220695049|gb|EED51392.1| SNF2 family helicase, putative [Aspergillus flavus NRRL3357]
Length = 942
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
CPIC + + + IT C HTFC CI + +E Q KCP C A + D +++
Sbjct: 699 CPICLDTLEQPVITACAHTFCKGCIEQVIERQHKCPMCRAEITDTSTL 746
>gi|317149015|ref|XP_001823065.2| SNF2 family helicase [Aspergillus oryzae RIB40]
Length = 924
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
CPIC + + + IT C HTFC CI + +E Q KCP C A + D +++
Sbjct: 681 CPICLDTLEQPVITACAHTFCKGCIEQVIERQHKCPMCRAEITDTSTL 728
>gi|351711337|gb|EHB14256.1| Tripartite motif-containing protein 35 [Heterocephalus glaber]
Length = 541
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 1 MSATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--C 58
++A PS S K +LLC +CF+ R+A +CGH FC C+S+C E+Q C
Sbjct: 6 VAALPGPSGSFK-------EELLCAVCFDPFRDAVTLQCGHNFCRGCVSRCWEVQATPFC 58
Query: 59 PKCS--ASLPDMNSVFPNFLLNELVQK 83
P C AS D+ + N LN LV+K
Sbjct: 59 PVCKARASPADLRT---NHTLNNLVEK 82
>gi|119181862|ref|XP_001242109.1| hypothetical protein CIMG_06005 [Coccidioides immitis RS]
Length = 832
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM-NSVFPNFLLNE 79
CPIC + + + IT C HTF +SCI + +E Q KCP C A L D N V P L E
Sbjct: 579 CPICLDSLDQPVITACAHTFDYSCIEQVIERQHKCPLCRAELADTSNLVHPAVALGE 635
>gi|83771802|dbj|BAE61932.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 826
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
CPIC + + + IT C HTFC CI + +E Q KCP C A + D +++
Sbjct: 583 CPICLDTLEQPVITACAHTFCKGCIEQVIERQHKCPMCRAEITDTSTL 630
>gi|402082908|gb|EJT77926.1| hypothetical protein GGTG_03029 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1494
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 9 RSLKRQHSPPD-NDLLCPICFEL-IREAHITRCGHTFCFSCISKCVE------LQIKCPK 60
R L R S D++C IC+EL E IT CGH FCF CI VE Q KCP
Sbjct: 927 RQLSRIESEKQLADVICRICYELHDEETRITECGHAFCFECIQNLVEDAGRRGRQAKCPA 986
Query: 61 CSA 63
CSA
Sbjct: 987 CSA 989
>gi|125830905|ref|XP_001343919.1| PREDICTED: RING finger protein 151-like [Danio rerio]
Length = 276
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 4 TSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSA 63
T T + + PPD+DL+C IC ++R +C H FC CI + ++ Q+KCP C
Sbjct: 33 TDTGGYEVDQFVDPPDDDLICVICRAVLRCPVRLKCNHVFCKECILQWMKRQVKCPCCRQ 92
Query: 64 SLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLR 96
S+ D N + F L++ + + +K G R
Sbjct: 93 SI-DQNQMLVLFKLSKSIGRLSVKCRNGQQGCR 124
>gi|348587936|ref|XP_003479723.1| PREDICTED: tripartite motif-containing protein 35-like [Cavia
porcellus]
Length = 494
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 14/83 (16%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCS 62
S P+ S K +LLC +CF+ R+A +CGH FC C+S+C E+Q CP C
Sbjct: 9 SGPAGSFK-------EELLCAVCFDPFRDAVTLQCGHNFCRGCVSRCWEVQTTPTCPVCK 61
Query: 63 --ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 62 AHASPADLRT---NHTLNNLVEK 81
>gi|440802816|gb|ELR23742.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 409
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 25/137 (18%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL--L 77
++ LCPICF I+ ++T CGH FC CI +CV + CP C+A V ++ +
Sbjct: 21 DEFLCPICFSPIQNCYMTPCGHHFCEGCIMECVNRKHVCPCCNADATKAQLVRNHWFDKM 80
Query: 78 NELVQKHKIKSA---------------QDSDGLRDFVASESQNLSLPDVNLMLEVLNQRK 122
+VQ+ K ++A Q SD LR +S + ++ +++ + EV +K
Sbjct: 81 LAIVQQEKEEAAKKYFSKLVSGSASAGQQSDVLR---SSRERAAAMGELSPVEEVF--QK 135
Query: 123 HLLEAESSVAQYKLLYE 139
H+ + S+A Y+L Y+
Sbjct: 136 HM---QRSLASYELYYQ 149
>gi|224075260|ref|XP_002304583.1| predicted protein [Populus trichocarpa]
gi|222842015|gb|EEE79562.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
PP CPIC + ++EA T+CGH FC SCI K + +Q KCP C
Sbjct: 180 PPAPMFCCPICMDEMKEATSTKCGHVFCKSCIEKALAVQKKCPTC 224
>gi|391871364|gb|EIT80524.1| helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box
superfamily [Aspergillus oryzae 3.042]
Length = 777
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
CPIC + + + IT C HTFC CI + +E Q KCP C A + D +++
Sbjct: 534 CPICLDTLEQPVITACAHTFCKGCIEQVIERQHKCPMCRAEITDTSTL 581
>gi|291413476|ref|XP_002723000.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
Length = 685
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK------CPKCSASLPDMNSVF 72
++ +LCPIC E+ T CGH+FC +C+ C + Q CP+C S P +
Sbjct: 117 EDKVLCPICLEVFHSPVTTACGHSFCMTCLQSCWDHQAAAGAGYYCPQCRESFPSRPRLC 176
Query: 73 PNFLLNELV 81
N LL E+V
Sbjct: 177 KNVLLGEMV 185
>gi|194883290|ref|XP_001975736.1| GG22477 [Drosophila erecta]
gi|190658923|gb|EDV56136.1| GG22477 [Drosophila erecta]
Length = 94
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIR--EAHITRCGHTFCFSCISKCVELQIKCP 59
S + P++ R+ PD+ CPIC E +R + T+CGH FCF CI K + KCP
Sbjct: 19 SPEAKPAKRRCRELVDPDDPYRCPICMEYVRRRQPGATKCGHVFCFGCIDKAIRSFEKCP 78
Query: 60 KCSASLPDMNSVFPNFL 76
C+ L + + P FL
Sbjct: 79 ICNRQL-TIGQILPIFL 94
>gi|357159222|ref|XP_003578378.1| PREDICTED: E3 ubiquitin-protein ligase complex slx8-rfp subunit
slx8-like [Brachypodium distachyon]
Length = 197
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P + CP+C+ + E T CGH FC SCI + +++Q KCP C SL MN+ +
Sbjct: 131 APKEPIFTCPVCWNKLEEPSTTICGHIFCTSCIKQSIQVQKKCPTCRKSL-RMNNFHRIY 189
Query: 76 LLNELV 81
L N +
Sbjct: 190 LPNSVA 195
>gi|81889420|sp|Q5RKG6.1|TRI35_RAT RecName: Full=Tripartite motif-containing protein 35
gi|55715693|gb|AAH85942.1| Tripartite motif-containing 35 [Rattus norvegicus]
Length = 501
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S + PSRS K +LLC +C++ R+A RCGH FC C+S C E+Q CP
Sbjct: 6 SVSPGPSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCP 58
Query: 60 KCSA-SLPDMNSVFPNFLLNELVQ 82
C ++P + N LN LV+
Sbjct: 59 VCKERAVP--GELRTNHTLNNLVE 80
>gi|133505096|ref|NP_001020313.2| tripartite motif-containing protein 35 [Rattus norvegicus]
gi|149030329|gb|EDL85385.1| tripartite motif protein 35 [Rattus norvegicus]
Length = 515
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S + PSRS K +LLC +C++ R+A RCGH FC C+S C E+Q CP
Sbjct: 20 SVSPGPSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCP 72
Query: 60 KCSA-SLPDMNSVFPNFLLNELVQ 82
C ++P + N LN LV+
Sbjct: 73 VCKERAVP--GELRTNHTLNNLVE 94
>gi|242049754|ref|XP_002462621.1| hypothetical protein SORBIDRAFT_02g029150 [Sorghum bicolor]
gi|241925998|gb|EER99142.1| hypothetical protein SORBIDRAFT_02g029150 [Sorghum bicolor]
Length = 198
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
P + CPIC+ + E T CGH FC +CI + +++Q KCP C L MNS +L
Sbjct: 135 PKETFFTCPICWNKMEEPSTTTCGHVFCDTCIKQAIKIQKKCPTCRKGL-KMNSAHRIYL 193
>gi|82541455|ref|XP_724967.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479801|gb|EAA16532.1| similar to CG8974 gene product-related [Plasmodium yoelii yoelii]
Length = 467
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 9 RSLKRQHSPPDND-----LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSA 63
+ ++P +ND C ICF+ +R+ +TRCGH FC+ C+S ++ I CP C A
Sbjct: 292 KETTNNNAPQENDCNRSTFECNICFDDVRDPVVTRCGHLFCWFCLSAWIKKNIDCPVCKA 351
Query: 64 SLPDMNSVFPNFLLNELVQKHKIKSAQD 91
+ N V P + + HK + ++
Sbjct: 352 EVTKEN-VIPLYGRGKNSSDHKYSNNEE 378
>gi|115532109|ref|NP_001022740.2| Protein T02C1.2 [Caenorhabditis elegans]
gi|87251867|emb|CAE17940.2| Protein T02C1.2 [Caenorhabditis elegans]
Length = 275
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCS--ASLPDMNSVFPNFL 76
++D+LC IC+++I E H RC H+FC CI +C+ L KCP C N +F +
Sbjct: 95 EDDVLCTICYDIIVEPHTLRCQHSFCKKCIDQCLPLTRKCPSCQQWVYWSRKNKIFKEKV 154
Query: 77 LNELVQKHK 85
L + +K +
Sbjct: 155 LRWVKEKQR 163
>gi|294954204|ref|XP_002788051.1| tripartite motif-containing protein, putative [Perkinsus marinus
ATCC 50983]
gi|239903266|gb|EER19847.1| tripartite motif-containing protein, putative [Perkinsus marinus
ATCC 50983]
Length = 203
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 1 MSATSTPSRSLK-RQHSPPDND-----LLCPICFELIREAHITRCGHTFCFSCISKCVEL 54
M+ S S+S+ Q+ +ND CPIC L+ E T CGHTFC +CI+K ++
Sbjct: 1 MTDQSDGSKSVGDNQYGEEENDKTISTFECPICLRLLVEPVTTACGHTFCKNCITKTMDH 60
Query: 55 QIKCPKCSASLPDMNSVFPNFLLNELVQKHKI 86
+ CP C A P + S N ++ L+Q+ +
Sbjct: 61 RQLCPSCRAPCPFIGST--NVMVANLIQQRLV 90
>gi|126303497|ref|XP_001380064.1| PREDICTED: tripartite motif-containing protein 35 [Monodelphis
domestica]
Length = 488
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCP 59
+++ PS S K +LLC IC++ R+A RCGH FC C+ +C ELQ CP
Sbjct: 6 GSSAGPSPSFK-------EELLCAICYDPFRDAVTLRCGHNFCRGCVGRCWELQDAPACP 58
Query: 60 KCS--ASLPDMNSVFPNFLLNELVQK 83
C AS + + N LN LV+K
Sbjct: 59 VCKERASPAGLRT---NHTLNNLVEK 81
>gi|284009784|ref|NP_001165007.1| nuclear factor 7, brain [Xenopus (Silurana) tropicalis]
gi|183985957|gb|AAI66279.1| Unknown (protein for MGC:185544) [Xenopus (Silurana) tropicalis]
Length = 648
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLN 78
+L CP+C EL ++ + CGH FC SCI K E Q CP+C S+ D N +L
Sbjct: 181 ELTCPLCMELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECKESITDRKYTI-NRVLA 239
Query: 79 ELVQK 83
LV+K
Sbjct: 240 NLVKK 244
>gi|444705695|gb|ELW47092.1| E3 ubiquitin-protein ligase TRIM31 [Tupaia chinensis]
Length = 490
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI---KCPKCSASLPDMNSVFPNFLL 77
+L CPIC ++++ CGH FC +CI++ E+ KCP C ++P N+ PN+LL
Sbjct: 13 ELTCPICMDILKGPVTVDCGHNFCLTCITQSAEMSDGSHKCPLC--NMPVKNTYSPNWLL 70
Query: 78 NELVQK 83
L++K
Sbjct: 71 MNLIEK 76
>gi|125562266|gb|EAZ07714.1| hypothetical protein OsI_29971 [Oryza sativa Indica Group]
Length = 449
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+P + CP+C + + T CGH FC CI C++ Q KCP C SL
Sbjct: 383 APKEPTFTCPVCLNKLDKPSTTNCGHIFCEKCIQACLKAQKKCPTCRKSL 432
>gi|432101110|gb|ELK29394.1| Tripartite motif-containing protein 35 [Myotis davidii]
Length = 493
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S + T SRS+K +LLC +C++ R+A RCGH FC C+++C E+Q CP
Sbjct: 6 SLSPTLSRSIK-------EELLCAVCYDPFRDAVTLRCGHNFCRECVTRCWEVQTTPTCP 58
Query: 60 KCSASLPDMNSVFPNFLLNELVQK 83
C + + + N LN LV+K
Sbjct: 59 VCKDRVAPAD-LRTNHTLNNLVEK 81
>gi|328770315|gb|EGF80357.1| hypothetical protein BATDEDRAFT_24856 [Batrachochytrium
dendrobatidis JAM81]
Length = 581
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D L CPIC EL A I C HTFC CI + + ++++CP C + ++++ N +L+
Sbjct: 43 DESLRCPICKELFDAAMILPCIHTFCSLCIRQSLLVKMQCPSCGKDVTGLHALKNNRVLD 102
Query: 79 ELVQKHK 85
+LV ++K
Sbjct: 103 DLVWQYK 109
>gi|168054700|ref|XP_001779768.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668853|gb|EDQ55452.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 629
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 31 IREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK----HKI 86
+++A +T CGH+FC+ CI + + CP C L + + +FPNFLL++ + K +
Sbjct: 1 MKDAFLTACGHSFCYKCIMTHLSNKNNCPCCGLYLTN-SQIFPNFLLSKFLGKAPTSQLV 59
Query: 87 KSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
+A ++ LR + +L + D++ ++ +L++ K E E + ++L E
Sbjct: 60 SNASPAEHLR-LALQQGADLPIEDIDSLMHLLSETKRKAEQEEAETNMEILLEF 112
>gi|393228348|gb|EJD35996.1| hypothetical protein AURDEDRAFT_117185 [Auricularia delicata
TFB-10046 SS5]
Length = 1199
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CP+CFE++RE IT C H FC +CI++ + +CP
Sbjct: 798 CPVCFEVLREPRITVCSHAFCLTCITEVIRRDTRCP 833
>gi|452847185|gb|EME49117.1| hypothetical protein DOTSEDRAFT_67996 [Dothistroma septosporum
NZE10]
Length = 495
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
CPIC + + I+ CGH+F CISK +E Q KCP C A LPD
Sbjct: 239 CPICLDSLHHPVISVCGHSFGQECISKVIEQQHKCPMCRAELPD 282
>gi|26344746|dbj|BAC36022.1| unnamed protein product [Mus musculus]
Length = 501
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S + PSRS K + LLC +C++ R+A RCGH FC C+S C E+Q CP
Sbjct: 6 SVSPGPSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCP 58
Query: 60 KCSA-SLPDMNSVFPNFLLNELVQ 82
C ++P + N LN LV+
Sbjct: 59 VCKERAVP--GELRTNHTLNNLVE 80
>gi|133506656|ref|NP_084255.2| tripartite motif-containing protein 35 [Mus musculus]
gi|26328447|dbj|BAC27962.1| unnamed protein product [Mus musculus]
gi|148704052|gb|EDL35999.1| tripartite motif-containing 35 [Mus musculus]
gi|148877603|gb|AAI45810.1| Tripartite motif-containing 35 [Mus musculus]
gi|148877857|gb|AAI45784.1| Tripartite motif-containing 35 [Mus musculus]
Length = 516
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S + PSRS K + LLC +C++ R+A RCGH FC C+S C E+Q CP
Sbjct: 21 SVSPGPSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCP 73
Query: 60 KCSA-SLPDMNSVFPNFLLNELVQ 82
C ++P + N LN LV+
Sbjct: 74 VCKERAVP--GELRTNHTLNNLVE 95
>gi|344306461|ref|XP_003421906.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31-like [Loxodonta
africana]
Length = 559
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++A CGH+FC SCIS + +KCP C S+ +++ PN+LL
Sbjct: 13 EVICPICIDILQDAVTIDCGHSFCLSCISWTQDPSDGLLKCPLCKKSV-RKDTLRPNWLL 71
Query: 78 NELVQK 83
LV+K
Sbjct: 72 MNLVEK 77
>gi|406867015|gb|EKD20054.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 896
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS-VFP 73
CPIC E + + IT C H F CI++ ++LQ KCP C A L D + V+P
Sbjct: 656 CPICLENLHDPVITACKHVFGLDCIARTIQLQQKCPMCRAELKDASVLVYP 706
>gi|56404889|sp|Q8C006.2|TRI35_MOUSE RecName: Full=Tripartite motif-containing protein 35; AltName:
Full=Hemopoietic lineage switch protein 5; AltName:
Full=Macrophage-derived apoptosis-inducing RBCC
protein; Short=Protein MAIR; AltName: Full=Protein Nc8
gi|25987103|gb|AAN75731.1|AF145374_1 haemopoietic lineage switch protein 5 [Mus musculus]
gi|18249657|dbj|BAB83914.1| NC8 [Mus musculus]
gi|29468270|gb|AAO85477.1| hemopoietic lineage switch protein 5 [Mus musculus]
gi|127797755|gb|AAH49105.2| Tripartite motif-containing 35 [Mus musculus]
Length = 501
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S + PSRS K + LLC +C++ R+A RCGH FC C+S C E+Q CP
Sbjct: 6 SVSPGPSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCP 58
Query: 60 KCSA-SLPDMNSVFPNFLLNELVQ 82
C ++P + N LN LV+
Sbjct: 59 VCKERAVP--GELRTNHTLNNLVE 80
>gi|141796066|gb|AAI34867.1| Zgc:162037 protein [Danio rerio]
Length = 548
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFP 73
D + C IC +L+++ I CGH FC SCI+ C L+ CP+C + ++
Sbjct: 7 DQEFSCSICLDLLKDPVILSCGHRFCMSCITDCWNLEDQKRVYSCPQCRQTFTPRPALNK 66
Query: 74 NFLLNELVQKHKIKSAQDSD 93
N +L E+++K K Q +D
Sbjct: 67 NVILTEMLEKLKTTRLQTAD 86
>gi|353234930|emb|CCA66950.1| hypothetical protein PIIN_00788 [Piriformospora indica DSM 11827]
Length = 363
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 6 TPSRSLKRQH--SPPDNDLLCPICFELIREAHI-TRCGHTFCFSCISKCVEL---QIKCP 59
TPS+ +K + S D+DL CPIC EL + CGH+ C C+ VE + CP
Sbjct: 172 TPSQGVKIRSALSAYDDDLSCPICLELFLSPQLLNPCGHSVCGDCVLLWVEKNPSHVTCP 231
Query: 60 KCSASLPDMNSVFPNFLLNELVQKH-------KIKSAQDSDG 94
C A+L + PNF + V KH K++ D G
Sbjct: 232 TCRANLVQGSIYIPNFAIETTVNKHIEVLRSNKVEDWMDGGG 273
>gi|358418416|ref|XP_595840.6| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Bos taurus]
gi|359078714|ref|XP_002697406.2| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Bos taurus]
Length = 574
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC SCI++ E +KCP C+ + +++ PN+LL
Sbjct: 13 EMICPICLDILQDPATIDCGHNFCLSCITQSGEAADSVLKCPLCN-KIVKRDTITPNWLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ SD
Sbjct: 72 VNLVE--KIQAMDPSD 85
>gi|440889567|gb|ELR44658.1| E3 ubiquitin-protein ligase TRIM31, partial [Bos grunniens mutus]
Length = 475
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH+FC SCI++ E +KCP C+ + +++ PN+LL
Sbjct: 5 EMICPICLDILQDPATIDCGHSFCLSCITQSGEAADSVLKCPLCN-KIVKRDTITPNWLL 63
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ SD
Sbjct: 64 VNLVE--KIQAMNPSD 77
>gi|452989744|gb|EME89499.1| hypothetical protein MYCFIDRAFT_49082 [Pseudocercospora fijiensis
CIRAD86]
Length = 950
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 28/48 (58%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
C IC + + + IT CGH F SCI K +E Q KCP C A L D S+
Sbjct: 709 CAICLDTLHQPVITTCGHAFGRSCIEKVIETQAKCPMCRAPLKDDGSL 756
>gi|165970572|gb|AAI58468.1| Unknown (protein for MGC:186357) [Xenopus (Silurana) tropicalis]
Length = 608
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLN 78
+L CP+C EL ++ + CGH FC SCI K E Q CP+C S+ D N +L
Sbjct: 141 ELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECKESITDRKYTI-NRVLA 199
Query: 79 ELVQK 83
LV+K
Sbjct: 200 NLVKK 204
>gi|297609763|ref|NP_001063596.2| Os09g0504700 [Oryza sativa Japonica Group]
gi|215678960|dbj|BAG96390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215707233|dbj|BAG93693.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679040|dbj|BAF25510.2| Os09g0504700 [Oryza sativa Japonica Group]
Length = 191
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 10 SLKRQHSPPDND---LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
SLK + PP CP+C+ + E T CGH FC +CI + +++Q KCP C SL
Sbjct: 118 SLKTSNEPPKAKEPVFNCPVCWNKLEEPSTTICGHIFCTTCIKQAIQIQKKCPTCRKSL 176
>gi|296474320|tpg|DAA16435.1| TPA: tripartite motif-containing protein 31-like [Bos taurus]
Length = 574
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC SCI++ E +KCP C+ + +++ PN+LL
Sbjct: 13 EMICPICLDILQDPATIDCGHNFCLSCITQSGEAADSVLKCPLCN-KIVKRDTITPNWLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ SD
Sbjct: 72 VNLVE--KIQAMDPSD 85
>gi|94534974|gb|AAI15999.1| LOC526787 protein [Bos taurus]
Length = 616
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCP+C E+ R T CGH FC SC+ + Q + CP+C S P +
Sbjct: 57 EDQVLCPVCLEVFRNPVTTACGHNFCMSCLQGFWDYQATMGEPLYCPQCRESFPTRPRLC 116
Query: 73 PNFLLNELV------QKHKIKSAQDSDGLRD 97
N +L E+V + + S++ G RD
Sbjct: 117 KNVILEEMVTCFTQAKGQTLGSSRSLAGPRD 147
>gi|440895181|gb|ELR47442.1| Tripartite motif-containing protein 47, partial [Bos grunniens
mutus]
Length = 620
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCP+C E+ R T CGH FC SC+ + Q + CP+C S P +
Sbjct: 57 EDQVLCPVCLEVFRNPVTTACGHNFCMSCLQGFWDYQATMGEPLYCPQCRESFPTRPRLC 116
Query: 73 PNFLLNELV------QKHKIKSAQDSDGLRD 97
N +L E+V + + S++ G RD
Sbjct: 117 KNVILEEMVTCFTQAKGQTLGSSRSLAGPRD 147
>gi|119912833|ref|XP_605161.3| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25 [Bos taurus]
Length = 723
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCP+C E+ R T CGH FC SC+ + Q + CP+C S P +
Sbjct: 164 EDQVLCPVCLEVFRNPVTTACGHNFCMSCLQGFWDYQATMGEPLYCPQCRESFPTRPRLC 223
Query: 73 PNFLLNELV------QKHKIKSAQDSDGLRD 97
N +L E+V + + S++ G RD
Sbjct: 224 KNVILEEMVTCFTQAKGQTLGSSRSLAGPRD 254
>gi|297487443|ref|XP_002696255.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25 [Bos taurus]
gi|296476054|tpg|DAA18169.1| TPA: hypothetical protein BOS_19513 [Bos taurus]
Length = 714
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCP+C E+ R T CGH FC SC+ + Q + CP+C S P +
Sbjct: 155 EDQVLCPVCLEVFRNPVTTACGHNFCMSCLQGFWDYQATMGEPLYCPQCRESFPTRPRLC 214
Query: 73 PNFLLNELV------QKHKIKSAQDSDGLRD 97
N +L E+V + + S++ G RD
Sbjct: 215 KNVILEEMVTCFTQAKGQTLGSSRSLAGPRD 245
>gi|338711330|ref|XP_001916879.2| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Equus caballus]
Length = 773
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK------CPKCSASLPDMNSVF 72
++ +LCPIC E+ R T CGH FC SC+ + Q CP+C + P +
Sbjct: 100 EDQVLCPICLEVFRNPVTTACGHNFCMSCLQGFWDHQATMDEMPYCPQCRETFPSRPRLC 159
Query: 73 PNFLLNELVQK------HKIKSAQDSDGLRD 97
N +L E+V + + SAQ+ G D
Sbjct: 160 KNGILEEMVNRFTQAKGQALGSAQNLAGPTD 190
>gi|432931016|ref|XP_004081573.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2-like [Oryzias latipes]
Length = 737
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
D+ C +C L E T CGHTFC C+ +C++ CP C +L +
Sbjct: 440 GDMECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNSNCPLCKENLAEYLAARGYSKTFL 499
Query: 68 MNSVFPNFLLNELVQKHKI 86
M V +L +ELV++ KI
Sbjct: 500 MEEVLQRYLGDELVERRKI 518
>gi|242008670|ref|XP_002425125.1| Peroxisome assembly protein, putative [Pediculus humanus corporis]
gi|212508799|gb|EEB12387.1| Peroxisome assembly protein, putative [Pediculus humanus corporis]
Length = 376
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK 83
CP+C + + +T CGH FC+SCI ++ Q KCP C S+ VF + NE V+
Sbjct: 237 CPLCLNIRKNTSVTPCGHLFCWSCIISWLQSQAKCPLCRQSVQPSRVVFILLIANESVRW 296
Query: 84 HKIKS 88
+ KS
Sbjct: 297 NHYKS 301
>gi|363732675|ref|XP_420345.3| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 [Gallus gallus]
Length = 671
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 14 QHSPPDN----DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD-- 67
QH+P ++ DL C +C L E T CGHTFC C+ +C++ KCP C L +
Sbjct: 364 QHTPFESVDPSDLDCSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPKCPLCKEGLSECL 423
Query: 68 -MNSVFPNFLLNELVQKH 84
M L+ EL+ K+
Sbjct: 424 AMRKYCKTVLMEELIAKY 441
>gi|171846709|gb|AAI61790.1| Unknown (protein for IMAGE:8960373) [Xenopus (Silurana) tropicalis]
Length = 536
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLN 78
+L CP+C EL ++ + CGH FC SCI K E Q CP+C S+ D N +L
Sbjct: 69 ELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECKESITDRKYTI-NRVLA 127
Query: 79 ELVQK 83
LV+K
Sbjct: 128 NLVKK 132
>gi|115313716|gb|AAI23924.1| novel protein similar to zinc finger nuclear phosphoprotein (xnf7)
[Xenopus (Silurana) tropicalis]
Length = 637
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLN 78
+L CP+C EL +E + C H FC SCI E+Q + CP+C LP+ S N L
Sbjct: 172 ELTCPLCLELFKEPVMVECSHNFCKSCIENAWEVQNSVSCPECEEPLPE-KSFIINRTLE 230
Query: 79 ELVQK 83
+LV K
Sbjct: 231 KLVMK 235
>gi|426250664|ref|XP_004019054.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Ovis aries]
Length = 574
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC ++++ CGH FC SCI++ E + +KCP C+ + +++ PN+LL
Sbjct: 13 EVICPICMDILQHPATIDCGHNFCLSCITQSGEAEDSVLKCPLCN-KIVRRDTITPNWLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI+S + S+
Sbjct: 72 VNLVE--KIQSMEPSE 85
>gi|358373232|dbj|GAA89831.1| SNF2 family helicase [Aspergillus kawachii IFO 4308]
Length = 916
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
CPIC + + + IT C H F SCI + +E Q KCP C A +PD
Sbjct: 673 CPICLDNLEQPVITACAHAFDRSCIEQVIERQHKCPMCRAEIPD 716
>gi|73965044|ref|XP_540426.2| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Canis lupus
familiaris]
Length = 594
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCPIC E+ R T CGH FC +C+ + Q + CP+C S P +
Sbjct: 34 EDQVLCPICLEVFRNPVTTACGHNFCMTCLQGFWDYQATAGETLYCPQCRESFPSRPRLC 93
Query: 73 PNFLLNELV------QKHKIKSAQDSDGLRD 97
N +L E+V + + S+Q G RD
Sbjct: 94 KNAILEEMVTCFTQAKDQTLGSSQILAGPRD 124
>gi|345316647|ref|XP_001517569.2| PREDICTED: hypothetical protein LOC100087696 [Ornithorhynchus
anatinus]
Length = 1002
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK----CPKCSASLPDMNSVFPNF 75
+++ CP+C + R I CGH+FC+ CI++ E + + CP+C A P PN+
Sbjct: 11 DEVTCPVCLDFFRNPVIIACGHSFCWICINEWAEEEPRVVFPCPECRAQSPK-GPFLPNW 69
Query: 76 L---LNELVQKHKIKSAQDSDGLRD 97
L E++QKH +S G++D
Sbjct: 70 RLRKLTEIIQKHSSVPPLNS-GMKD 93
>gi|261198487|ref|XP_002625645.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081]
gi|239594797|gb|EEQ77378.1| SNF2 family helicase [Ajellomyces dermatitidis SLH14081]
Length = 929
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS-VFPNFLLNE 79
+C IC + +R+ IT C HTF +SCI + +E Q KCP C A + D S V P L E
Sbjct: 686 MCAICLDTLRQPVITPCAHTFDYSCIEQAIERQHKCPLCRAEIEDCKSLVAPAADLGE 743
>gi|327351006|gb|EGE79863.1| SNF2 family helicase [Ajellomyces dermatitidis ATCC 18188]
Length = 931
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS-VFPNFLLNE 79
+C IC + +R+ IT C HTF +SCI + +E Q KCP C A + D S V P L E
Sbjct: 688 MCAICLDTLRQPVITPCAHTFDYSCIEQAIERQHKCPLCRAEIEDCKSLVAPAADLGE 745
>gi|239610082|gb|EEQ87069.1| SNF2 family helicase [Ajellomyces dermatitidis ER-3]
Length = 931
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS-VFPNFLLNE 79
+C IC + +R+ IT C HTF +SCI + +E Q KCP C A + D S V P L E
Sbjct: 688 MCAICLDTLRQPVITPCAHTFDYSCIEQAIERQHKCPLCRAEIEDCKSLVAPAADLGE 745
>gi|340960103|gb|EGS21284.1| helicase-like protein [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 901
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
CP+C++++ + IT C H FC CI+K ++LQ KCP C A L + + P
Sbjct: 660 CPVCYDVMIDPVITHCKHPFCRKCITKVIKLQHKCPMCRAELSEDKLIDP 709
>gi|336268062|ref|XP_003348796.1| hypothetical protein SMAC_01819 [Sordaria macrospora k-hell]
gi|380094054|emb|CCC08271.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 972
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
CPIC E + IT C H FC CI K E+Q KCP C A L +
Sbjct: 730 CPICIEPLNNPVITHCKHVFCRGCIDKVFEVQQKCPMCRAPLSE 773
>gi|336471312|gb|EGO59473.1| hypothetical protein NEUTE1DRAFT_79619 [Neurospora tetrasperma FGSC
2508]
gi|350292403|gb|EGZ73598.1| hypothetical protein NEUTE2DRAFT_86972 [Neurospora tetrasperma FGSC
2509]
Length = 898
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
CPIC + + IT C H FC CI K +E+Q KCP C A L +
Sbjct: 657 CPICIDPLSNPIITHCKHVFCRGCIDKVIEVQQKCPMCRAPLSE 700
>gi|118496046|dbj|BAF37539.1| DNA repair and recombination protein RAD5B [Neurospora crassa]
Length = 950
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
CPIC + + IT C H FC CI K +E+Q KCP C A L +
Sbjct: 709 CPICIDPLSNPIITHCKHVFCRGCIDKVIEVQQKCPMCRAPLSE 752
>gi|326924620|ref|XP_003208523.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Meleagris gallopavo]
Length = 483
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 14 QHSPPDN----DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD-- 67
QH+P ++ DL C +C L E T CGHTFC C+ +C++ KCP C L +
Sbjct: 176 QHTPFESVDPSDLDCSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPKCPLCKEGLSECL 235
Query: 68 ----------MNSVFPNFLLNELVQKHKI 86
M + +L EL ++ KI
Sbjct: 236 AMRKYCKTVLMEELIARYLPEELTERRKI 264
>gi|164423632|ref|XP_962645.2| hypothetical protein NCU07975 [Neurospora crassa OR74A]
gi|157070175|gb|EAA33409.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 898
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
CPIC + + IT C H FC CI K +E+Q KCP C A L +
Sbjct: 657 CPICIDPLSNPIITHCKHVFCRGCIDKVIEVQQKCPMCRAPLSE 700
>gi|68070983|ref|XP_677405.1| c3h4-type ring finger protein [Plasmodium berghei strain ANKA]
gi|56497513|emb|CAH95476.1| c3h4-type ring finger protein, putative [Plasmodium berghei]
Length = 223
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK 83
C ICF+ +R+ +TRCGH FC+ C+S ++ I CP C A + N V P + +
Sbjct: 72 CNICFDDVRDPVVTRCGHLFCWFCLSAWIKKNIDCPVCKAEVTKEN-VIPLYGRGKNSSD 130
Query: 84 HKIKSAQD 91
HK + ++
Sbjct: 131 HKYSNNEE 138
>gi|403366289|gb|EJY82944.1| hypothetical protein OXYTRI_19439 [Oxytricha trifallax]
Length = 764
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 19 DNDLLCPICFELIREAHIT-RCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLL 77
+N + CP+C + + + +T C H+FCF CI + E + +CP+C A + PN ++
Sbjct: 679 ENTMQCPMCQDTMNNSCLTISCSHSFCFDCIDQRQEYKDRCPQCHAKIQ---GTMPNTII 735
Query: 78 NELVQKHKIKSAQ 90
++L+ ++K K AQ
Sbjct: 736 DQLLLRYKEKKAQ 748
>gi|255070521|ref|XP_002507342.1| E3 ubiquitin-protein ligase COP1 [Micromonas sp. RCC299]
gi|226522617|gb|ACO68600.1| E3 ubiquitin-protein ligase COP1 [Micromonas sp. RCC299]
Length = 827
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
+D +CPIC E+ A + CGHTFCF CI + CP CS L +++FPN L+
Sbjct: 7 DDHVCPICREIYVNAFSSICGHTFCFECIRARIAHIQTCPCCSHPLS-RDTLFPNLALDR 65
Query: 80 LVQKHKIKSAQDSDGLR 96
L++ + S Q D L+
Sbjct: 66 LLKGLSLAS-QPRDSLK 81
>gi|367009578|ref|XP_003679290.1| hypothetical protein TDEL_0A07470 [Torulaspora delbrueckii]
gi|359746947|emb|CCE90079.1| hypothetical protein TDEL_0A07470 [Torulaspora delbrueckii]
Length = 408
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D L C IC E +R +T CGHTFC CI + + KCP C L + +S+ FL+
Sbjct: 23 DKLLRCHICKEFLRVPVLTPCGHTFCSLCIRQYLRQDPKCPLCLNELRE-SSLRSEFLVG 81
Query: 79 ELVQKHKIKSAQDSDGLRDFVASESQNLS 107
E+V+ HK D L+++ +ES+ S
Sbjct: 82 EIVEIHKSSRQALLDILKEYSRTESKGDS 110
>gi|281206888|gb|EFA81072.1| hypothetical protein PPL_05908 [Polysphondylium pallidum PN500]
Length = 586
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCI--SKCVELQIKCPKCSASLPDMNSVFPN 74
PP LLCPI L R+ I +CGHTFC SC+ +I+CP L D N FPN
Sbjct: 111 PPSTSLLCPIHNGLFRDPFIAKCGHTFCRSCVLARTTNNSRIECPIDHTQLAD-NDFFPN 169
Query: 75 FLLN 78
++
Sbjct: 170 LAIS 173
>gi|161611711|gb|AAI55883.1| Xnf7 protein [Xenopus laevis]
Length = 609
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLN 78
+L CP+C EL ++ + CGH FC SCI K E Q CP+C S+ D L N
Sbjct: 142 ELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECKESITDRKYTINRVLAN 201
>gi|410897557|ref|XP_003962265.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2-like [Takifugu rubripes]
Length = 765
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------M 68
DL C +C L E T CGHTFC C+ +C++ CP C +L + M
Sbjct: 469 DLECSLCMRLFYEPVATPCGHTFCLKCLERCMDHNPNCPLCKENLSEYLATRGYSKTLLM 528
Query: 69 NSVFPNFLLNELVQKHKI 86
V FL EL ++ KI
Sbjct: 529 EEVLQRFLAEELAERKKI 546
>gi|284447304|ref|NP_001079694.2| nuclear factor 7, ovary [Xenopus laevis]
gi|52783144|sp|Q91431.1|NF7O_XENLA RecName: Full=Nuclear factor 7, ovary; Short=xNF7-O
gi|1311667|gb|AAB35876.1| nuclear factor 7 [Xenopus laevis]
Length = 610
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLN 78
+L CP+C EL ++ + CGH FC SCI K E Q CP+C S+ D L N
Sbjct: 143 ELTCPLCVELFKDPVMVACGHNFCRSCIDKVWEGQSSFACPECKESITDRKYTINRVLAN 202
>gi|198468590|ref|XP_002134067.1| GA25529 [Drosophila pseudoobscura pseudoobscura]
gi|198146479|gb|EDY72694.1| GA25529 [Drosophila pseudoobscura pseudoobscura]
Length = 128
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELI--REAHITRCGHTFCFSCISKCVELQIKCPKCS 62
S+P R ++ P + CP+C E++ RE +T+CGH FC CI + KCP+C+
Sbjct: 56 SSPMRKRNDENEPSEGAYKCPVCLEIVCDREPLLTKCGHVFCRPCIETAIRYSHKCPRCN 115
>gi|147902700|ref|NP_001081473.1| nuclear factor 7, brain [Xenopus laevis]
gi|52783145|sp|Q92021.1|NF7B_XENLA RecName: Full=Nuclear factor 7, brain; Short=xNF7; Short=xNF7-B
gi|214915|gb|AAA49995.1| xnf7 [Xenopus laevis]
gi|238611|gb|AAB20269.1| zinc finger nuclear phosphoprotein [Xenopus laevis]
Length = 609
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLN 78
+L CP+C EL ++ + CGH FC SCI K E Q CP+C S+ D L N
Sbjct: 142 ELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECRESITDRKYTINRVLAN 201
>gi|384253047|gb|EIE26522.1| WD40 repeat-like protein [Coccomyxa subellipsoidea C-169]
Length = 533
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 30 LIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIKSA 89
L+R+ +T CGHTFC SC++ + + CP C+ L +S FPNF+L+++V +
Sbjct: 3 LLRDPFVTACGHTFCCSCLTTHLNARSTCPSCAQYLIK-DSTFPNFMLSKVVARAAAAEE 61
Query: 90 QD----SDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVA 132
++ + + + + + LSL DVN +L+ L +++ +E + + A
Sbjct: 62 REKKPVAQKMVEDIREDRCKLSLQDVNTLLQCLWEKREAMEQQEAEA 108
>gi|322709349|gb|EFZ00925.1| hypothetical protein MAA_03521 [Metarhizium anisopliae ARSEF 23]
Length = 1073
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 8 SRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
++SL + N++ C +C+ L + T CGHTFC SC+ + ++ +CP C +L
Sbjct: 695 AKSLNHLQTITRNEVDCQVCYALFHDPFTTGCGHTFCRSCLHRTLDHSHRCPICRCTLAI 754
Query: 68 MNSVFPNFL-LNELVQK------HKIKSAQDSDGLRDFVASESQNLSLP 109
+ P+ NE + + K+A+D D D A+ Q+L LP
Sbjct: 755 NPLLNPDLCPSNESITRLIELFWPDEKAARDKDVTSD-TAARHQDLDLP 802
>gi|37360240|dbj|BAC98098.1| mKIAA1098 protein [Mus musculus]
Length = 193
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S + PSRS K +LLC +C++ R+A RCGH FC C+S C E+Q CP
Sbjct: 17 SVSPGPSRSFK-------EELLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCP 69
Query: 60 KCSA-SLPDMNSVFPNFLLNELVQ 82
C ++P + N LN LV+
Sbjct: 70 VCKERAVP--GELRTNHTLNNLVE 91
>gi|332650885|gb|AEE81066.1| ubiquitin-protein ligase/zinc ion binding protein [Triticum
aestivum]
Length = 252
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
P + + CP+C + E T+CGH FC CI + ++ Q KCP C +L
Sbjct: 189 PKEPNFTCPVCLNKLVEPSTTKCGHIFCAECIKQAIQFQKKCPTCRKAL 237
>gi|126631290|gb|AAI33209.1| Xnf7 protein [Xenopus laevis]
Length = 588
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLN 78
+L CP+C EL ++ + CGH FC SCI K E Q CP+C S+ D L N
Sbjct: 121 ELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQSSFACPECRESITDRKYTINRVLAN 180
>gi|302831227|ref|XP_002947179.1| hypothetical protein VOLCADRAFT_103272 [Volvox carteri f.
nagariensis]
gi|300267586|gb|EFJ51769.1| hypothetical protein VOLCADRAFT_103272 [Volvox carteri f.
nagariensis]
Length = 2807
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
++L C +C ++ T CGH +C SC+ + EL CPKC A+LP ++ P
Sbjct: 16 DELTCAVCLDICVRPCTTPCGHNYCRSCLRRNTELNRPCPKCRANLPAGHTTGP 69
>gi|449539973|gb|EMD30973.1| hypothetical protein CERSUDRAFT_120235 [Ceriporiopsis subvermispora
B]
Length = 1152
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CPICF++I E IT C H FC +CIS+ + KCP
Sbjct: 793 CPICFDIISEPRITVCAHMFCLACISEVIARDAKCP 828
>gi|348534951|ref|XP_003454965.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Oreochromis niloticus]
Length = 806
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
DL C +C L E T CGHTFC C+ +C++ CP C +L +
Sbjct: 482 GDLECSLCMRLFYEPVATPCGHTFCLKCLERCLDHNPNCPLCKENLSEYLASRGYNKTLL 541
Query: 68 MNSVFPNFLLNELVQKHKI 86
M V +L +EL ++ KI
Sbjct: 542 MEEVLQRYLGDELAERKKI 560
>gi|156084216|ref|XP_001609591.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796843|gb|EDO06023.1| hypothetical protein BBOV_II000630 [Babesia bovis]
Length = 344
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
D CP+CF+L+ + T CGH FC +CI + ++ CP C L S PN LL +L
Sbjct: 6 DFECPVCFKLLYKPVTTSCGHNFCKTCIDQAAAYRLACPLCRQRLSSQYS--PNILLFQL 63
Query: 81 VQK 83
+ +
Sbjct: 64 LNE 66
>gi|70952403|ref|XP_745372.1| c3h4-type ring finger protein [Plasmodium chabaudi chabaudi]
gi|56525674|emb|CAH88108.1| c3h4-type ring finger protein, putative [Plasmodium chabaudi
chabaudi]
Length = 209
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 14 QHSPPDND-----LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM 68
++P ND C ICF+ +R+ +TRCGH FC+ C+S ++ CP C A +
Sbjct: 39 NNTPQQNDCNRSTFECNICFDDVRDPVVTRCGHLFCWFCLSAWIKKNNDCPVCKAEVTKE 98
Query: 69 NSVFPNFLLNELVQKHKIKSAQD 91
N V P + + HK + ++
Sbjct: 99 N-VIPLYGRGKNSSDHKYSTTEE 120
>gi|119498441|ref|XP_001265978.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181]
gi|119414142|gb|EAW24081.1| SNF2 family helicase, putative [Neosartorya fischeri NRRL 181]
Length = 928
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
+CPIC + + + IT CGH++ CI + +E Q KCP C A++ D +++
Sbjct: 685 MCPICLDTLEQPVITACGHSYDRGCIEQVIERQHKCPLCRANIDDTSTL 733
>gi|361126725|gb|EHK98714.1| putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1
[Glarea lozoyensis 74030]
Length = 793
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 26/49 (53%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
DN C IC E + IT C H F CI + +ELQ KCP C LPD
Sbjct: 546 DNHDECSICLEELHNPVITACKHAFGQECIERTIELQHKCPMCRTELPD 594
>gi|164658864|ref|XP_001730557.1| hypothetical protein MGL_2353 [Malassezia globosa CBS 7966]
gi|159104453|gb|EDP43343.1| hypothetical protein MGL_2353 [Malassezia globosa CBS 7966]
Length = 613
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 3 ATSTP-SRSLKRQHSPPDNDLLCPICFELIREAHITRCGHT-FCFSCI-SKCVELQIKCP 59
A S P S++ Q P D L CP+C +L+R+A T C HT FC C+ + E CP
Sbjct: 297 ARSRPLSKTDVYQSVPSDPALACPLCSKLVRDAVKTSCCHTSFCEECVQTHLFEHDFVCP 356
Query: 60 KCSASLPDMNSVFPNFLLNELVQKHKIKSAQDSD 93
+C +PD+ + + +L +LV+++ K+ S+
Sbjct: 357 ECEKRIPDIEMLKIDDVLRKLVREYVEKTIARSE 390
>gi|56805539|dbj|BAD83389.1| tripartite motif protein 31 isoform beta [Sus scrofa]
Length = 411
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH+FC CI + E IKCP C+ + +++ PN+LL
Sbjct: 13 EVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCN-KIVKRDTIRPNWLL 71
Query: 78 NELVQK 83
LV+K
Sbjct: 72 VNLVEK 77
>gi|113931534|ref|NP_001039216.1| tripartite motif containing 69 [Xenopus (Silurana) tropicalis]
gi|89272509|emb|CAJ82588.1| novel protein similar to zinc finger nuclear phosphoprotein (xnf7)
[Xenopus (Silurana) tropicalis]
Length = 637
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLN 78
+L CP+C EL +E + C H FC SCI E++ + CP+C LP+ S N L
Sbjct: 172 ELTCPLCLELFKEPVMVECSHNFCKSCIENAWEVRNSVSCPECEEPLPE-KSFIINRTLE 230
Query: 79 ELVQK 83
+LV K
Sbjct: 231 KLVMK 235
>gi|440794050|gb|ELR15221.1| DWNN domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 983
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 3 ATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRC-GHTFCFSCISKCVELQIKCPKC 61
A +T L R+ +P +L CPIC L+ +A + C G++FC C+ + +CP C
Sbjct: 238 AIATVDNPLVREETP--TELQCPICELLLEDAVLVPCCGNSFCSQCVRAALLSNGRCPSC 295
Query: 62 SASLPDMNSVFPNFLLNELVQKHKIKSAQD 91
+ ++S+FPN L E V +K +S +D
Sbjct: 296 KDASVTVDSLFPNKNLREAVSAYK-RSVRD 324
>gi|95132401|gb|AAI16594.1| Zgc:162037 protein [Danio rerio]
Length = 539
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C IC +L+++ I CGH FC SCI+ C L+ CP+C + ++ N +L
Sbjct: 3 CSICLDLLKDPVILSCGHRFCMSCITDCWNLEDQKRVYSCPQCRQTFTPRPALNKNVILT 62
Query: 79 ELVQKHKIKSAQDSD 93
E+++K K Q +D
Sbjct: 63 EMLEKLKTTRLQTAD 77
>gi|311266809|ref|XP_003131281.1| PREDICTED: tripartite motif-containing protein 47-like [Sus scrofa]
Length = 644
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCPIC E+ R T CGH FC +C+ + Q + CP+C S+P +
Sbjct: 84 EDQVLCPICLEVFRHPVTTACGHNFCMTCLQGFWDHQATLGEALYCPQCRESIPSRPRLC 143
Query: 73 PNFLLNELV 81
N L E+V
Sbjct: 144 KNVTLEEMV 152
>gi|432878434|ref|XP_004073323.1| PREDICTED: zinc-binding protein A33-like [Oryzias latipes]
Length = 531
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI----KCPKCSASLPDMNSVFPNFL 76
+L CP+C EL + I CGH FC CI +C E + CPKC S + PN L
Sbjct: 13 ELTCPVCLELFHDPVILECGHHFCKVCIVQCWEAKADDFSNCPKCRKSC--TRKLRPNSL 70
Query: 77 LNELVQKHKIKSAQDS 92
L +V+ + A D+
Sbjct: 71 LCNVVESVRRARATDA 86
>gi|367054374|ref|XP_003657565.1| hypothetical protein THITE_2123400 [Thielavia terrestris NRRL 8126]
gi|347004831|gb|AEO71229.1| hypothetical protein THITE_2123400 [Thielavia terrestris NRRL 8126]
Length = 463
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM-NSVFPN 74
P D+ LLCPIC + + T C HTFC +C+ + +E+ CP LPD+ + P
Sbjct: 57 GPVDDALLCPICRNPLYDPLTTPCRHTFCSACLEQSIEVHSICPIDRKPLPDLWDCRLPP 116
Query: 75 FLLNELVQKHKIK 87
++NE + + K+K
Sbjct: 117 LIVNEQLDRLKVK 129
>gi|60649717|gb|AAH91694.1| Trim47l protein [Rattus norvegicus]
Length = 615
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK------CPKCSASLPDMNSVF 72
++ +LCPIC ++ R T CGH FC +C+ + Q CP+C + P +
Sbjct: 58 EDQVLCPICLDVFRNPVTTACGHNFCMTCLQSFWDHQADTGETYYCPQCREAFPSRPRLC 117
Query: 73 PNFLLNELVQKHKIKSAQDSDGLRDFVA 100
N +L E+V + +Q S L
Sbjct: 118 KNVILGEMVACFTLAKSQTSGPLWGLAG 145
>gi|363732435|ref|XP_001234476.2| PREDICTED: tripartite motif-containing protein 35 [Gallus gallus]
Length = 525
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPKC--SASLPDMNSVF 72
+P +LLCPIC+E REA CGH FC CIS+ E Q CP C ++S D+
Sbjct: 53 APFKEELLCPICYEPFREAVTLCCGHNFCKGCISRSWEHRQHTCPVCKETSSFDDLRI-- 110
Query: 73 PNFLLNELVQ 82
N LN LV+
Sbjct: 111 -NHTLNNLVE 119
>gi|224053707|ref|XP_002297939.1| predicted protein [Populus trichocarpa]
gi|222845197|gb|EEE82744.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
CPIC + ++EA T+CGH FC +CI K + +Q KCP C
Sbjct: 197 CPICMDELQEATSTKCGHVFCKNCIKKALAVQKKCPTC 234
>gi|328876839|gb|EGG25202.1| RING zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 786
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
D D LCPICFE A +T+CGH C+ CI + + KCP C
Sbjct: 274 DEDYLCPICFEPPFAAKVTKCGHITCYGCILRSLSHSPKCPLC 316
>gi|109489383|ref|XP_001073650.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25 [Rattus norvegicus]
gi|109492230|ref|XP_001081685.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25 [Rattus norvegicus]
Length = 623
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK------CPKCSASLPDMNSVF 72
++ +LCPIC ++ R T CGH FC +C+ + Q CP+C + P +
Sbjct: 66 EDQVLCPICLDVFRNPVTTACGHNFCMTCLQSFWDHQADTGETYYCPQCREAFPSRPRLC 125
Query: 73 PNFLLNELVQKHKIKSAQDSDGLRDFVA 100
N +L E+V + +Q S L
Sbjct: 126 KNVILGEMVACFTLAKSQTSGPLWGLAG 153
>gi|157867458|ref|XP_001682283.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125736|emb|CAJ03477.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 725
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
+CP+CFE+ ++ CGH C +C ++C+ + +CP C+ ++P+M P
Sbjct: 22 VCPVCFEVFKKPVCFPCGHILCRACATRCIAARPRCPLCNQAVPNMRHCAP 72
>gi|355705097|gb|EHH31022.1| RING finger protein 127 [Macaca mulatta]
Length = 623
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 327 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 386
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 387 MEELIAKFLPEELKERRKL 405
>gi|145523776|ref|XP_001447721.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415243|emb|CAK80324.1| unnamed protein product [Paramecium tetraurelia]
Length = 247
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 10 SLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
L++Q P DL+CPIC E+ ++ T+CGH FC CI + + +CP C +
Sbjct: 49 KLEQQSRPKFEDLICPICLEIFQKVTTTQCGHAFCEMCIFDSLMRKAECPVCRVKI 104
>gi|334350182|ref|XP_001371945.2| PREDICTED: hypothetical protein LOC100018904 [Monodelphis domestica]
Length = 2255
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 8 SRSLKRQHSPP-----DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCS 62
+R R H+ P DL CP+C L E T CGHTFC C+ + ++ KCP C
Sbjct: 1801 TRETDRSHNVPFQSFDPTDLDCPLCMRLFYEPVTTPCGHTFCMKCLERSLDHNPKCPLCK 1860
Query: 63 ASLPD------------MNSVFPNFLLNELVQKHKI 86
L + M ++ +L ++L ++ +I
Sbjct: 1861 EGLAECVSVRKCSKNLLMEAMIAKYLPDDLKERRRI 1896
>gi|449688255|ref|XP_004211696.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like, partial [Hydra
magnipapillata]
Length = 180
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 25 PICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV--- 81
PI F + + CF+CI +E+ +CP+C + + +FPN LN L+
Sbjct: 71 PISFGSSQTNITDKLNDITCFNCIKTSLEVSNRCPQCKFVIDRKDQIFPNTALNTLIDAC 130
Query: 82 ------QKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEA 127
++ K + S+ + D V E NL L +VN +L+ L Q+K LEA
Sbjct: 131 SGRGYLKRKKADLSVHSNEIYDIVKKE--NLDLSEVNNLLDALIQKKESLEA 180
>gi|296236258|ref|XP_002763253.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Callithrix jacchus]
Length = 759
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|398399000|ref|XP_003852957.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
gi|339472839|gb|EGP87933.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
Length = 916
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
C IC E + E IT CGH+F CI + +E Q KCP C A L D
Sbjct: 677 CAICLETLHEPVITACGHSFGKDCIVRVIEGQHKCPMCRAELKD 720
>gi|335291962|ref|XP_001928015.3| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Sus scrofa]
gi|211926941|dbj|BAG82682.1| tripartite motif-containing protein 31 [Sus scrofa]
Length = 576
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSASLPDMNSVFPNFL 76
+++CPIC +++++ CGH+FC CI + E IKCP C+ + +++ PN+L
Sbjct: 12 EEVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCN-KIVKRDTIRPNWL 70
Query: 77 LNELVQK 83
L LV+K
Sbjct: 71 LVNLVEK 77
>gi|297304644|ref|XP_001105370.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like isoform 1 [Macaca mulatta]
Length = 610
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|449498900|ref|XP_002191244.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 [Taeniopygia guttata]
Length = 726
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Query: 14 QHSPPD----NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD-- 67
QH P + +DL C +C L E T CGHTFC C+ +C++ KCP C L +
Sbjct: 419 QHIPFEVVDPSDLDCSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPKCPLCKEGLSECL 478
Query: 68 ----------MNSVFPNFLLNELVQKHKI 86
M + +L EL ++ KI
Sbjct: 479 AMRKYCKTVLMEELIARYLPEELTERRKI 507
>gi|403279122|ref|XP_003931115.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Saimiri boliviensis boliviensis]
Length = 762
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 466 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 525
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 526 MEELIAKFLPEELKERRKL 544
>gi|329755345|ref|NP_001193331.1| E3 ubiquitin-protein ligase TRIM31 [Sus scrofa]
Length = 576
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH+FC CI + E IKCP C+ + +++ PN+LL
Sbjct: 13 EVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCN-KIVKRDTIRPNWLL 71
Query: 78 NELVQK 83
LV+K
Sbjct: 72 VNLVEK 77
>gi|355757648|gb|EHH61173.1| RING finger protein 127 [Macaca fascicularis]
Length = 664
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 368 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 427
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 428 MEELIAKFLPEELKERRKL 446
>gi|402911230|ref|XP_003918240.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 3 [Papio anubis]
Length = 610
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|73747840|ref|NP_001027026.1| LON peptidase N-terminal domain and RING finger protein 3 isoform 1
[Homo sapiens]
gi|121949074|sp|Q496Y0.1|LONF3_HUMAN RecName: Full=LON peptidase N-terminal domain and RING finger
protein 3; AltName: Full=RING finger protein 127
gi|71121157|gb|AAH99847.1| LON peptidase N-terminal domain and ring finger 3 [Homo sapiens]
gi|71680341|gb|AAI00672.1| LON peptidase N-terminal domain and ring finger 3 [Homo sapiens]
gi|119610294|gb|EAW89888.1| LON peptidase N-terminal domain and ring finger 3, isoform CRA_d
[Homo sapiens]
Length = 759
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|403279120|ref|XP_003931114.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Saimiri boliviensis boliviensis]
Length = 721
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 425 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 484
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 485 MEELIAKFLPEELKERRKL 503
>gi|397482969|ref|XP_003812682.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Pan paniscus]
Length = 757
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|403279124|ref|XP_003931116.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 3 [Saimiri boliviensis boliviensis]
Length = 613
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 466 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 525
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 526 MEELIAKFLPEELKERRKL 544
>gi|114689958|ref|XP_001135253.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Pan troglodytes]
Length = 757
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|158261419|dbj|BAF82887.1| unnamed protein product [Homo sapiens]
Length = 718
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 482 MEELIAKFLPEELKERRKL 500
>gi|402911226|ref|XP_003918238.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Papio anubis]
Length = 718
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 482 MEELIAKFLPEELKERRKL 500
>gi|297710866|ref|XP_002832081.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Pongo abelii]
Length = 718
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLVSRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 482 MEELIAKFLPEELKERRKL 500
>gi|296236256|ref|XP_002763252.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Callithrix jacchus]
Length = 718
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 482 MEELIAKFLPEELKERRKL 500
>gi|426397207|ref|XP_004064815.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Gorilla gorilla gorilla]
Length = 759
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|159126292|gb|EDP51408.1| SNF2 family helicase, putative [Aspergillus fumigatus A1163]
Length = 975
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
+CPIC + + + IT CGH++ CI + +E Q KCP C A++ D +++
Sbjct: 732 MCPICLDTLEQPVITACGHSYDRGCIEQVIERQHKCPLCRANIDDNSTL 780
>gi|70998504|ref|XP_753974.1| SNF2 family helicase [Aspergillus fumigatus Af293]
gi|66851610|gb|EAL91936.1| SNF2 family helicase, putative [Aspergillus fumigatus Af293]
Length = 975
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
+CPIC + + + IT CGH++ CI + +E Q KCP C A++ D +++
Sbjct: 732 MCPICLDTLEQPVITACGHSYDRGCIEQVIERQHKCPLCRANIDDNSTL 780
>gi|402911228|ref|XP_003918239.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Papio anubis]
Length = 759
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|297710864|ref|XP_002832080.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Pongo abelii]
Length = 759
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLVSRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|149054767|gb|EDM06584.1| rCG32509 [Rattus norvegicus]
Length = 363
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCPIC ++ R T CGH FC +C+ + Q CP+C + P +
Sbjct: 11 EDQVLCPICLDVFRNPVTTACGHNFCMTCLQSFWDHQADTGETYYCPQCREAFPSRPRLC 70
Query: 73 PNFLLNELVQKHKIKSAQDSDGLRDFVA 100
N +L E+V + +Q S L
Sbjct: 71 KNVILGEMVACFTLAKSQTSGPLWGLAG 98
>gi|75072991|sp|Q8HXH0.1|LONF3_MACFA RecName: Full=LON peptidase N-terminal domain and RING finger
protein 3
gi|26449305|dbj|BAC41780.1| hypothetical protein [Macaca fascicularis]
Length = 718
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 482 MEELIAKFLPEELKERRKL 500
>gi|426397205|ref|XP_004064814.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Gorilla gorilla gorilla]
Length = 718
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 482 MEELIAKFLPEELKERRKL 500
>gi|37622896|ref|NP_079054.3| LON peptidase N-terminal domain and RING finger protein 3 isoform 2
[Homo sapiens]
gi|73695332|gb|AAI03492.1| LON peptidase N-terminal domain and ring finger 3 [Homo sapiens]
gi|119610291|gb|EAW89885.1| LON peptidase N-terminal domain and ring finger 3, isoform CRA_a
[Homo sapiens]
Length = 718
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 482 MEELIAKFLPEELKERRKL 500
>gi|397482967|ref|XP_003812681.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Pan paniscus]
Length = 716
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 482 MEELIAKFLPEELKERRKL 500
>gi|348558178|ref|XP_003464895.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Cavia porcellus]
Length = 623
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ LCPIC E+ R+ T CGH FC +C+ + Q CP+C S P +
Sbjct: 39 EDQFLCPICLEVFRDPITTTCGHNFCMTCLQNFWDHQAAVGEMYHCPQCRESFPSRPELR 98
Query: 73 PNFLLNELV 81
N +L LV
Sbjct: 99 KNVILENLV 107
>gi|114689960|ref|XP_529131.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Pan troglodytes]
Length = 716
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 482 MEELIAKFLPEELKERRKL 500
>gi|397482971|ref|XP_003812683.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 3 [Pan paniscus]
Length = 610
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|326509579|dbj|BAJ87005.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525537|dbj|BAJ88815.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532854|dbj|BAJ89272.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P + CP+C+ + E T CGH FC +CI + ++ Q KCP C L MN+ +
Sbjct: 146 TPKEPIFTCPVCWNKLDEPATTMCGHIFCTNCIKQAIQFQKKCPTCRKHL-KMNNFHRIY 204
Query: 76 LLN 78
L N
Sbjct: 205 LPN 207
>gi|261329872|emb|CBH12855.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 434
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L CP+CF+L+ RCGH +C +C +C+ + CP C++S+ ++ P L +LV
Sbjct: 14 LSCPVCFDLMDRPMCFRCGHVYCANCADRCISGRPMCPLCNSSVQNIRQARPLPALAKLV 73
>gi|170033120|ref|XP_001844427.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873541|gb|EDS36924.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 298
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 18 PDNDLLCPICFELI--REAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
P ++CPIC++ I ++A T CGH FCF+CI + ++L+ KCP C L
Sbjct: 238 PARSVVCPICYDSIFKKQASSTVCGHLFCFACIKQEIQLRQKCPLCKRKL 287
>gi|72391932|ref|XP_846260.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359880|gb|AAX80307.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802796|gb|AAZ12701.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 433
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L CP+CF+L+ RCGH +C +C +C+ + CP C++S+ ++ P L +LV
Sbjct: 14 LSCPVCFDLMDRPMCFRCGHVYCANCADRCISGRPMCPLCNSSVQNIRQARPLPALAKLV 73
>gi|332861515|ref|XP_003317700.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 [Pan troglodytes]
Length = 610
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|21750228|dbj|BAC03744.1| unnamed protein product [Homo sapiens]
gi|119610293|gb|EAW89887.1| LON peptidase N-terminal domain and ring finger 3, isoform CRA_c
[Homo sapiens]
Length = 610
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|395754353|ref|XP_003779759.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 [Pongo abelii]
Length = 610
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLVSRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 523 MEELIAKFLPEELKERRKL 541
>gi|358384533|gb|EHK22130.1| hypothetical protein TRIVIDRAFT_28957 [Trichoderma virens Gv29-8]
Length = 880
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
D+ C IC+E+ IT C H FC CI++ ++LQ KCP C L + N + P
Sbjct: 638 DSQEECAICYEVPTNPVITNCQHVFCRHCIARAIQLQHKCPMCRNPLTEDNLLEP 692
>gi|213407964|ref|XP_002174753.1| RING finger domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212002800|gb|EEB08460.1| RING finger domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 453
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
+ L CP+C E + + T CGHT+C+ C+ ++ CP C L P +++N+
Sbjct: 80 SSLTCPVCTETFFKPYTTHCGHTYCYRCLDAWIKTSRTCPSCRQKL--YLEPVPAYIVND 137
Query: 80 LVQK-----HKIKSAQDSDGLRDFVA 100
L+ + ++++SA SD D A
Sbjct: 138 LISRLSKCMNELQSAAKSDRRADSAA 163
>gi|145502955|ref|XP_001437455.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404605|emb|CAK70058.1| unnamed protein product [Paramecium tetraurelia]
Length = 247
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 13 RQHSPPD-NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+QHS P DL+CPIC E+ ++ T+CGH FC CI + + +CP C +
Sbjct: 51 QQHSRPKFEDLICPICLEIFQKVTTTQCGHAFCEMCIFDSLMRKAECPVCRVKI 104
>gi|348528663|ref|XP_003451836.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 [Oreochromis niloticus]
Length = 740
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------M 68
DL CP+C L E T CGH FC C+ +C++ KCP C + + +
Sbjct: 444 DLECPLCMRLFYEPVTTPCGHAFCLQCLERCLDHNPKCPLCKEDMSEYLVQRKYCKTVII 503
Query: 69 NSVFPNFLLNELVQKHKI 86
++ +L +EL+++ KI
Sbjct: 504 ENLISKYLPSELMERQKI 521
>gi|410981812|ref|XP_003997260.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Felis catus]
Length = 672
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISK------CVELQIKCPKCSASLPDMNSVF 72
++ +LCPIC E+ R T CGH FC +C+ V + CP+C S P +
Sbjct: 112 EDQVLCPICLEVFRNPVTTTCGHNFCMACLQGFWDHLATVGETLYCPQCRESFPSRPRLC 171
Query: 73 PNFLLNELV 81
N +L E+V
Sbjct: 172 KNGILEEMV 180
>gi|336375146|gb|EGO03482.1| hypothetical protein SERLA73DRAFT_129809 [Serpula lacrymans var.
lacrymans S7.3]
Length = 162
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC--SASLPDMNSVFPNF 75
CP+C + + +TRCGH FC SCI + + CP C S SL + ++P F
Sbjct: 108 CPLCLDTTKALSVTRCGHIFCTSCIQRVFRTKRLCPVCRQSGSLKQLRKIYPTF 161
>gi|326665208|ref|XP_002660960.2| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25 [Danio rerio]
Length = 885
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
CPIC +L++E CGH++C SCI+ C CP+C + ++ N +
Sbjct: 360 CPICLDLLKEPVTIPCGHSYCMSCITDCWNQDEQRRVYSCPQCRQTFIPRPALNKNVVFA 419
Query: 79 ELVQKHKIKSAQDSD 93
E+V+K K+ Q +D
Sbjct: 420 EIVEKLKMTKVQTTD 434
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C IC +L++E CGH++C SCI+ C CP+C + ++ N +
Sbjct: 13 CLICLDLLKEPVTIPCGHSYCMSCITDCWNQDEQRRVYSCPQCRQTFTPRPALNKNVVFA 72
Query: 79 ELVQKHKIKSAQDSD 93
E+V+K K+ Q +D
Sbjct: 73 EIVEKLKMTKVQTTD 87
>gi|310831392|ref|YP_003970035.1| putative superfamily II helicase [Cafeteria roenbergensis virus
BV-PW1]
gi|309386576|gb|ADO67436.1| putative superfamily II helicase [Cafeteria roenbergensis virus
BV-PW1]
Length = 816
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS-------LPDMNSVFPNFL 76
CPIC + I ++ I CGH FC+ CI +++ CP C + D NS N
Sbjct: 601 CPICLDKIIQSTILPCGHIFCYECIQAITKVKKVCPLCKQEINNKLICIADKNSKSSNIK 660
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLSL-PDVNLMLEVLN 119
+ L+ K+ +K+ +R ++ N+ + + ML++++
Sbjct: 661 SDSLITKYGVKTGTLIKLVRKITSNPENNIIIFSQYDFMLKLIS 704
>gi|71029014|ref|XP_764150.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351104|gb|EAN31867.1| hypothetical protein TP04_0515 [Theileria parva]
Length = 309
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
D CPICF ++ + T CGH FC CI + + CP C L S PN LL +L
Sbjct: 6 DFECPICFNILYKPVTTSCGHNFCKFCIDQAIHSSPNCPLCRIPLSSQYS--PNLLLTQL 63
Query: 81 VQ---KHKIKSAQDSDGLRDFVASESQNLSLPDVN 112
+ K +I+S S + V + QN PD N
Sbjct: 64 INERFKDEIQSRHPSKISFNEVQNSMQN--SPDYN 96
>gi|336384460|gb|EGO25608.1| hypothetical protein SERLADRAFT_448570 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1148
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CPICF ++ E IT C H+FCF+CI + + KCP
Sbjct: 813 CPICFSILTEPRITSCAHSFCFACIQEVIARDPKCP 848
>gi|345306671|ref|XP_001513421.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Ornithorhynchus anatinus]
Length = 597
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD---MNSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L + M +
Sbjct: 300 SDLDCSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPKCPLCKEGLSECLAMRKYCKTVI 359
Query: 77 LNELVQKH 84
+ EL+ K+
Sbjct: 360 MEELIAKY 367
>gi|336371699|gb|EGO00039.1| hypothetical protein SERLA73DRAFT_167889 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1106
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CPICF ++ E IT C H+FCF+CI + + KCP
Sbjct: 813 CPICFSILTEPRITSCAHSFCFACIQEVIARDPKCP 848
>gi|119610292|gb|EAW89886.1| LON peptidase N-terminal domain and ring finger 3, isoform CRA_b
[Homo sapiens]
gi|193783588|dbj|BAG53499.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 207 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 266
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 267 MEELIAKFLPEELKERRKL 285
>gi|10439066|dbj|BAB15419.1| unnamed protein product [Homo sapiens]
Length = 516
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 220 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 279
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 280 MEELIAKFLPEELKERRKL 298
>gi|22122567|ref|NP_666189.1| E3 ubiquitin-protein ligase TRIM31 [Mus musculus]
gi|81901365|sp|Q8R0K2.1|TRI31_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM31; AltName:
Full=Tripartite motif-containing protein 31
gi|20071873|gb|AAH26666.1| Tripartite motif-containing 31 [Mus musculus]
gi|26329337|dbj|BAC28407.1| unnamed protein product [Mus musculus]
gi|148691362|gb|EDL23309.1| tripartite motif-containing 31 [Mus musculus]
Length = 507
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL--QIKCPKCSASLPDMNSVFPNFLLN 78
++ CPIC E++++ CGH FC CIS+ + +I+CP C S+ + N+ PN LL
Sbjct: 13 EVTCPICMEILQDPVTIDCGHNFCLQCISQVGKTSEKIQCPLCKLSV-NKNTFRPNKLLA 71
Query: 79 ELVQK 83
L +K
Sbjct: 72 SLAEK 76
>gi|154270293|ref|XP_001536002.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410016|gb|EDN05404.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 884
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
+C IC + +++ IT C HTF +SCI + +E Q KCP C A + D S+
Sbjct: 644 ICAICLDTLQQPVITPCAHTFDYSCIEQAIERQHKCPLCRAEIEDCKSLV 693
>gi|449540684|gb|EMD31673.1| hypothetical protein CERSUDRAFT_88802 [Ceriporiopsis subvermispora
B]
Length = 1191
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CPICF++I E IT C H FC +CI++ + KCP
Sbjct: 794 CPICFDIISEPRITVCAHMFCLACITEVIARDAKCP 829
>gi|389742277|gb|EIM83464.1| hypothetical protein STEHIDRAFT_160046 [Stereum hirsutum FP-91666
SS1]
Length = 592
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 19 DNDLLCPICFELIREAHITR-CGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLL 77
++++ CPICF+L H+ CGH+FC C ++ CP C A L + PN L
Sbjct: 305 EDNMTCPICFDLFSVPHLGNPCGHSFCGLCGMGWIKENRTCPMCRAKLNKQVPMIPNISL 364
Query: 78 NELVQKHKIKSAQDSDGLRDFV 99
+ +++H +A + G RD++
Sbjct: 365 DNTIERH--INALAASGDRDWL 384
>gi|302822657|ref|XP_002992985.1| hypothetical protein SELMODRAFT_431145 [Selaginella moellendorffii]
gi|300139185|gb|EFJ05931.1| hypothetical protein SELMODRAFT_431145 [Selaginella moellendorffii]
Length = 429
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
L+++ P + + CP+C ++++ CGH FC C+ + + Q CP C + ++
Sbjct: 34 LQKRQEKPISFIDCPVCHKVLKHPVEIECGHVFCNRCLRRKMGRQKMCPICKS---EIEY 90
Query: 71 VFPNFLLNELVQKHKIKSA 89
+ P++L+ ELV+K +K
Sbjct: 91 IHPSYLMRELVRKFGVKDG 109
>gi|390600158|gb|EIN09553.1| acetyl-CoA synthetase-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1650
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 9 RSLKRQHSPP---DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC--SA 63
+ L HS P L CP+C + TRCGH FC CI+ + +CP C SA
Sbjct: 1548 KGLVTGHSTPRVGSMRLACPLCARFPKRPATTRCGHCFCEQCITSALRQSRRCPVCMTSA 1607
Query: 64 SLPDMNSVFPNFL 76
S + + P+F+
Sbjct: 1608 SPSHLVKIHPSFI 1620
>gi|332226230|ref|XP_003262292.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Nomascus leucogenys]
Length = 502
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 206 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 265
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 266 MEELIAKFLPEELKERRKL 284
>gi|431921507|gb|ELK18873.1| LON peptidase N-terminal domain and RING finger protein 3 [Pteropus
alecto]
Length = 755
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 459 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNII 518
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 519 MEELIAKFLPEELKERKKL 537
>gi|332226228|ref|XP_003262291.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Nomascus leucogenys]
Length = 516
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 220 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 279
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 280 MEELIAKFLPEELKERRKL 298
>gi|260816137|ref|XP_002602828.1| hypothetical protein BRAFLDRAFT_99155 [Branchiostoma floridae]
gi|229288141|gb|EEN58840.1| hypothetical protein BRAFLDRAFT_99155 [Branchiostoma floridae]
Length = 348
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 10 SLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMN 69
S+ S P++ + C IC + + I CGHTFC C+ + ++CP C +P
Sbjct: 3 SVATGWSFPEDSMSCGICLQPFKRPKILPCGHTFCEECLVEAARGGLRCPTCRVRVPLKG 62
Query: 70 SVFP---NFLLNELVQKHKIKSAQDSDGLRDFVAS 101
V N+ + E+ QK +A D + + A+
Sbjct: 63 GVAALPNNYQVTEMCQKFSELAAAARDATQQWDAT 97
>gi|358393960|gb|EHK43361.1| hypothetical protein TRIATDRAFT_130835 [Trichoderma atroviride IMI
206040]
Length = 886
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
C IC++ IT C H FC CI++ VELQ KCP C L + N + P
Sbjct: 649 CAICYDTPTNPIITNCQHVFCRHCITRAVELQGKCPMCRNQLTEDNFLEP 698
>gi|345807557|ref|XP_003435631.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 [Canis lupus familiaris]
Length = 775
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 479 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 538
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 539 MEELIAKFLPEELKERRRL 557
>gi|302820315|ref|XP_002991825.1| hypothetical protein SELMODRAFT_430109 [Selaginella moellendorffii]
gi|300140363|gb|EFJ07087.1| hypothetical protein SELMODRAFT_430109 [Selaginella moellendorffii]
Length = 408
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
L+++ P + + CP+C ++++ CGH FC C+ + + Q CP C + ++
Sbjct: 34 LQKRQEKPISFIDCPVCHKVLKHPVEIECGHVFCNRCLRRKMGRQKMCPICKS---EIEY 90
Query: 71 VFPNFLLNELVQKHKIKSA 89
+ P++L+ ELV+K +K
Sbjct: 91 IHPSYLMRELVRKFGVKDG 109
>gi|58266030|ref|XP_570171.1| mRNA polyadenylation-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134110846|ref|XP_775887.1| hypothetical protein CNBD2950 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258553|gb|EAL21240.1| hypothetical protein CNBD2950 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226404|gb|AAW42864.1| mRNA polyadenylation-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 598
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 13 RQHSPPDNDLLCPICFELIREAHITRCGHT-FCFSCI-SKCVELQIKCPKCSASLPDMNS 70
R P + DL CP+C +L+ EA T C +T FC C+ + V+ +CP C + +P ++
Sbjct: 313 RDQEPLEADLTCPLCKKLVWEAVRTPCCNTAFCEECVQTYLVDHDFECPHCESKVPSLDR 372
Query: 71 VFP---------NFLLNELVQKHKIKSAQDSDG 94
+ P N++ +EL QK+K +DG
Sbjct: 373 LKPDEDLRKRSRNYVDHEL-QKNKDAKGDSADG 404
>gi|407921689|gb|EKG14829.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 739
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
C IC E + + IT C H F +SCI + +E Q KCP C A LP S+
Sbjct: 498 CAICLEPLHDPVITCCAHAFGYSCIERVIEGQHKCPMCRAELPSTASL 545
>gi|301761420|ref|XP_002916133.1| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 3-like [Ailuropoda melanoleuca]
Length = 754
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD---MNSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L N +
Sbjct: 458 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLAQCLASRKYSKNVI 517
Query: 77 LNELVQK 83
+ EL+ K
Sbjct: 518 MEELIAK 524
>gi|84996901|ref|XP_953172.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304168|emb|CAI76547.1| hypothetical protein, conserved [Theileria annulata]
Length = 359
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
D CPICF ++ + T CGH FC CI + ++ CP C L S PN LL +L
Sbjct: 6 DFECPICFNILYKPVTTSCGHNFCKFCIDQAIDSSPNCPLCRVPLTTQYS--PNILLTQL 63
Query: 81 VQK 83
+ +
Sbjct: 64 INE 66
>gi|194578815|ref|NP_001124134.1| uncharacterized protein LOC100170828 [Danio rerio]
gi|190338807|gb|AAI62527.1| Similar to Tripartite motif-containing protein 62 [Danio rerio]
Length = 426
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 3 ATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCP 59
ATS SL+ DL C ICFEL +E + C H FC CI K V + CP
Sbjct: 2 ATSKSKTSLR-------EDLTCAICFELFKEPVMLGCMHHFCRRCIVSYWKSVRSPVTCP 54
Query: 60 KCSASLPDMNSVFPNFLLNELVQKHKIKSA 89
+C P+ N+L+ LV+K + S+
Sbjct: 55 QCRQEFPNKCCFQANYLVANLVEKVRASSS 84
>gi|163914797|ref|NP_001106416.1| uncharacterized protein LOC100127579 [Xenopus (Silurana)
tropicalis]
gi|157423248|gb|AAI53352.1| LOC100127579 protein [Xenopus (Silurana) tropicalis]
Length = 481
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKC 61
L CP+C +L RE CGH+FC CI +C LQ I CP+C
Sbjct: 12 LRCPVCLDLFREPVTIPCGHSFCLGCIRQCWSLQGSSISCPQC 54
>gi|380805777|gb|AFE74764.1| LON peptidase N-terminal domain and RING finger protein 3 isoform
1, partial [Macaca mulatta]
Length = 314
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 178 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 237
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ K+
Sbjct: 238 MEELIAKFLPEELKERRKL 256
>gi|170097814|ref|XP_001880126.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82]
gi|164644564|gb|EDR08813.1| SNF2 superfamily protein [Laccaria bicolor S238N-H82]
Length = 828
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CPICF ++ +A IT C H FCF CI++ + KCP
Sbjct: 601 CPICFSVLDDARITNCAHMFCFPCITEVISRDPKCP 636
>gi|325095596|gb|EGC48906.1| transcription factor [Ajellomyces capsulatus H88]
Length = 929
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
+C IC + +++ IT C HTF +SCI + +E Q KCP C A + D S+
Sbjct: 686 ICAICLDTLQQPVITPCAHTFDYSCIEQAIEHQHKCPLCRAEIEDCKSL 734
>gi|367053371|ref|XP_003657064.1| hypothetical protein THITE_2024021, partial [Thielavia terrestris
NRRL 8126]
gi|347004329|gb|AEO70728.1| hypothetical protein THITE_2024021, partial [Thielavia terrestris
NRRL 8126]
Length = 1042
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
D+LC C+E + IT CGH FC CI++ ++++ CP C A++
Sbjct: 734 DVLCRACYEPPVDPQITECGHAFCKECITEALKVRPACPTCRAAI 778
>gi|345313735|ref|XP_001507680.2| PREDICTED: tripartite motif-containing protein 35-like, partial
[Ornithorhynchus anatinus]
Length = 155
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCSASLPDMNSVFPNFLLN 78
+LLC IC++ R+A RCGH FC C+S+C L+ CP C + PN LN
Sbjct: 24 ELLCAICYDPFRDAVTLRCGHNFCRGCVSRCWALRGPPACPVCKERA-SPAGLRPNHTLN 82
Query: 79 ELVQK 83
LV K
Sbjct: 83 NLVDK 87
>gi|428175777|gb|EKX44665.1| hypothetical protein GUITHDRAFT_109441 [Guillardia theta CCMP2712]
Length = 364
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 1 MSATSTPSRSLKRQHSPP-DNDLLCPICFELI-REAHITRCGHTFCFSCISKCVE----- 53
+++T+ +S+ R +NDL CPIC +L+ R +T CGHTFCF CI +
Sbjct: 43 LTSTTQADKSIMRDAMKAFENDLTCPICLDLVARPVTLTECGHTFCFLCIRTNISTVQQQ 102
Query: 54 -LQIKCPKCSASLPDMNSVFPNFLLNELVQ 82
L CP C ++ S PN ++ + V+
Sbjct: 103 HLVPSCPNCRKNITTAPSA-PNLMIEKCVK 131
>gi|258566852|ref|XP_002584170.1| DNA repair protein rad18 [Uncinocarpus reesii 1704]
gi|237905616|gb|EEP80017.1| DNA repair protein rad18 [Uncinocarpus reesii 1704]
Length = 433
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
+TP L R S L C +C + IT C HTFC CI +C+ + KCP C S
Sbjct: 15 ATPISGLSRVESA----LRCQVCKDFFNNPVITSCSHTFCSLCIRRCLSAEGKCPTCR-S 69
Query: 65 LPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHL 124
+ + N+ ++ELV K K+ D + DFV +N S N E ++
Sbjct: 70 EDQVVKLRQNWAIDELVDSFK-KARGD---ILDFV----RNASATTENGADEEHTSKRRK 121
Query: 125 LEAESSVAQYKL 136
+EA+ + Q ++
Sbjct: 122 IEAQENDGQRRI 133
>gi|449453284|ref|XP_004144388.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Cucumis sativus]
gi|449523007|ref|XP_004168516.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Cucumis sativus]
Length = 206
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 10 SLKRQHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
S+K + +PP + CPIC + E TRCGH FC +CI + +Q KCP C
Sbjct: 134 SMKVKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIGVQSKCPTC 186
>gi|426257663|ref|XP_004022444.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Ovis aries]
Length = 759
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 523 MEELIAKFLPEELKERRRL 541
>gi|395332726|gb|EJF65104.1| hypothetical protein DICSQDRAFT_159356 [Dichomitus squalens
LYAD-421 SS1]
Length = 1226
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CPICF ++ E IT CGH FC CI++ + KCP
Sbjct: 838 CPICFSILSEPRITFCGHMFCLPCITEVISRDPKCP 873
>gi|326916688|ref|XP_003204637.1| PREDICTED: tripartite motif-containing protein 35-like [Meleagris
gallopavo]
Length = 384
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 4 TSTPSRSLKRQHSPP----DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-IKC 58
++PS SL SP +LLCPIC+E REA CGH FC CIS+ E + C
Sbjct: 37 ANSPSSSLATLVSPSTAPFKEELLCPICYEPFREAVTLCCGHNFCKGCISRSWEHRNHAC 96
Query: 59 PKCSASLPDMNSVFPNFLLNELVQ 82
P C + + + + N LN LV+
Sbjct: 97 PICKET-SNFDDLRVNHTLNNLVE 119
>gi|41055965|ref|NP_956431.1| E3 ubiquitin-protein ligase RAD18 [Danio rerio]
gi|27881894|gb|AAH44430.1| RAD18 homolog (S. cerevisiae) [Danio rerio]
gi|182892082|gb|AAI65800.1| Rad18 protein [Danio rerio]
Length = 426
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
P D L CPICFE + + +T+C H FC CI K + ++ CP C++ + + + N L
Sbjct: 18 PMDTLLRCPICFEFLNISMMTQCSHNFCSLCIRKFLSYKLLCPVCNSPSTEQD-LRNNRL 76
Query: 77 LNELVQ 82
L++LVQ
Sbjct: 77 LDDLVQ 82
>gi|291407849|ref|XP_002720257.1| PREDICTED: LON peptidase N-terminal domain and ring finger 3
[Oryctolagus cuniculus]
Length = 734
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 438 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLAQCLASRKYSKNVI 497
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 498 MEELIAKFLPEELKERRRL 516
>gi|300798556|ref|NP_001178063.1| LON peptidase N-terminal domain and RING finger protein 3 [Bos
taurus]
gi|296471329|tpg|DAA13444.1| TPA: LON peptidase N-terminal domain and ring finger 3 isoform 2
[Bos taurus]
Length = 759
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 463 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 523 MEELIAKFLPEELKERRRL 541
>gi|426257665|ref|XP_004022445.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Ovis aries]
Length = 718
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 482 MEELIAKFLPEELKERRRL 500
>gi|395537133|ref|XP_003770559.1| PREDICTED: tripartite motif-containing protein 65 [Sarcophilus
harrisii]
Length = 519
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-IKCPKCSASLPDMNSVFPNF 75
P + LLC IC EL REA CGH FC +CI LQ + CP+C + N
Sbjct: 5 PLEEKLLCAICLELYREAVTLPCGHNFCRACIINYWNLQEVDCPQCRTPFAQRPELHKNG 64
Query: 76 LLNELVQKHKIKSA 89
L ++V+ + +A
Sbjct: 65 ALCDVVETLRAGAA 78
>gi|225557865|gb|EEH06150.1| DNA repair and recombination protein RAD5B [Ajellomyces capsulatus
G186AR]
Length = 928
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
+C IC + +++ IT C HTF +SCI + +E Q KCP C A + D S+
Sbjct: 685 ICAICLDTLQQPVITPCAHTFDYSCIEQVIEHQHKCPLCRAEIEDCKSL 733
>gi|417404396|gb|JAA48953.1| Putative lon peptidase domain and ring finger protein 3 isoform 1
[Desmodus rotundus]
Length = 757
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD---MNSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L N +
Sbjct: 461 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNII 520
Query: 77 LNELVQK 83
+ EL+ K
Sbjct: 521 MEELIAK 527
>gi|116784892|gb|ABK23508.1| unknown [Picea sitchensis]
gi|224284637|gb|ACN40051.1| unknown [Picea sitchensis]
gi|224285742|gb|ACN40586.1| unknown [Picea sitchensis]
Length = 231
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 12 KRQHSPPDND-----------LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPK 60
KR+H P N L C IC + ++E T CGH FC SCI ++ Q KCP
Sbjct: 152 KRKHGHPSNSNNLPVEVKEVKLTCAICMDSMKEETSTICGHIFCRSCIMSAIQFQKKCPT 211
Query: 61 CSA--SLPDMNSVF 72
C S+ +++ +F
Sbjct: 212 CRRKLSMANIHRIF 225
>gi|443684594|gb|ELT88488.1| hypothetical protein CAPTEDRAFT_200403 [Capitella teleta]
Length = 308
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 21 DLLCPICFELIREAHITR-CGHTFCFSCISKCV--ELQIKCPKCSASLPDMNSVFPNFLL 77
+ CPIC E+++EA I R CG++FC CI + CP+C A+ +++ N L
Sbjct: 203 EFKCPICREMLKEAAIIRCCGYSFCDDCIRDALLDSEHHTCPQCGAAGQSPDALVANKTL 262
Query: 78 NELVQKHKIKSAQDSDGLRDFVASESQNL 106
++V H ++ G R VA S +L
Sbjct: 263 RKMVDNH-----ENGTGWRSVVAKISASL 286
>gi|344286296|ref|XP_003414895.1| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 3-like [Loxodonta africana]
Length = 651
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 355 SDLECSVCMRLFYEPVTTPCGHTFCLKCLERCLDHNTKCPLCKDGL 400
>gi|432105304|gb|ELK31601.1| LON peptidase N-terminal domain and RING finger protein 3 [Myotis
davidii]
Length = 533
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD---MNSVFPNFLL 77
DL C +C L E T CGHTFC C+ +C++ KCP C L N ++
Sbjct: 238 DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNIIM 297
Query: 78 NELVQK 83
EL+ K
Sbjct: 298 EELIAK 303
>gi|37622899|ref|NP_060543.5| E3 ubiquitin-protein ligase TRIM68 [Homo sapiens]
gi|74748376|sp|Q6AZZ1.1|TRI68_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM68; AltName:
Full=RING finger protein 137; AltName: Full=SSA protein
SS-56; Short=SS-56; AltName: Full=Tripartite
motif-containing protein 68
gi|50959730|gb|AAH75058.1| Tripartite motif-containing 68 [Homo sapiens]
gi|80474981|gb|AAI09064.1| Tripartite motif-containing 68 [Homo sapiens]
gi|117644268|emb|CAL37628.1| hypothetical protein [synthetic construct]
gi|119589241|gb|EAW68835.1| tripartite motif-containing 68, isoform CRA_b [Homo sapiens]
gi|158255768|dbj|BAF83855.1| unnamed protein product [Homo sapiens]
gi|167773819|gb|ABZ92344.1| tripartite motif-containing 68 [synthetic construct]
gi|261857918|dbj|BAI45481.1| tripartite motif-containing protein 68 [synthetic construct]
Length = 485
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQ 122
>gi|296471328|tpg|DAA13443.1| TPA: LON peptidase N-terminal domain and ring finger 3 isoform 1
[Bos taurus]
Length = 718
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 422 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 481
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 482 MEELIAKFLPEELKERRRL 500
>gi|149744890|ref|XP_001487924.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Equus caballus]
Length = 757
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 461 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 520
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 521 MEELIAKFLPEELKERRRL 539
>gi|68356808|ref|XP_688915.1| PREDICTED: tripartite motif-containing protein 16 [Danio rerio]
Length = 558
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C +C +L++E CGH++C SCI+ C CP+C + ++ N +L
Sbjct: 15 CSVCLDLLKEPVTIPCGHSYCMSCITDCWNQDEQRRVYSCPQCRQTFTPRPALNKNVMLA 74
Query: 79 ELVQKHKI-KSAQDSDGLRDFVAS 101
E+V+K K+ + AQ +D + S
Sbjct: 75 EMVEKAKVTRRAQTTDPAVSYAGS 98
>gi|42407630|dbj|BAD08744.1| unknown protein [Oryza sativa Japonica Group]
gi|42761408|dbj|BAD11573.1| unknown protein [Oryza sativa Japonica Group]
Length = 449
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+P + CP+C + + T CGH FC CI ++ Q KCP C SL
Sbjct: 383 APKEPTFTCPVCLNKLDKPSTTNCGHIFCEKCIQAWLKAQKKCPTCRKSL 432
>gi|332211498|ref|XP_003254855.1| PREDICTED: E3 ubiquitin-protein ligase TRIM68 [Nomascus leucogenys]
Length = 485
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQ 122
>gi|114635789|ref|XP_521739.2| PREDICTED: E3 ubiquitin-protein ligase TRIM68 isoform 2 [Pan
troglodytes]
gi|410215106|gb|JAA04772.1| tripartite motif containing 68 [Pan troglodytes]
gi|410248752|gb|JAA12343.1| tripartite motif containing 68 [Pan troglodytes]
gi|410296110|gb|JAA26655.1| tripartite motif containing 68 [Pan troglodytes]
gi|410334281|gb|JAA36087.1| tripartite motif containing 68 [Pan troglodytes]
Length = 485
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQ 122
>gi|16923932|gb|AAL31641.1|AF439153_1 Ro/SSA1 related protein FLJ10369 [Homo sapiens]
Length = 485
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQ 122
>gi|15982946|gb|AAL11501.1|AF360739_1 SSA protein SS-56 [Homo sapiens]
Length = 485
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQ 122
>gi|426367070|ref|XP_004050559.1| PREDICTED: E3 ubiquitin-protein ligase TRIM68 [Gorilla gorilla
gorilla]
Length = 485
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQ 122
>gi|335306474|ref|XP_003135396.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Sus scrofa]
Length = 752
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 456 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 515
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 516 MEELIAKFLPEELKERRRL 534
>gi|397465865|ref|XP_003804699.1| PREDICTED: E3 ubiquitin-protein ligase TRIM68 [Pan paniscus]
Length = 485
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQ 122
>gi|351710907|gb|EHB13826.1| LON peptidase and RING finger protein 3 [Heterocephalus glaber]
Length = 597
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD---MNSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L N +
Sbjct: 301 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 360
Query: 77 LNELVQK 83
+ EL+ K
Sbjct: 361 MEELIAK 367
>gi|348563693|ref|XP_003467641.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Cavia porcellus]
Length = 917
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 621 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 680
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 681 MEELIAKFLPEELKERRRL 699
>gi|290970080|ref|XP_002668028.1| predicted protein [Naegleria gruberi]
gi|284081072|gb|EFC35284.1| predicted protein [Naegleria gruberi]
Length = 213
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 1 MSATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE----LQI 56
+ ++S + + +++ + DN C ICF+ E IT+CGH +C+SCI + ++ +
Sbjct: 117 LKSSSNSTNTQQQEENDDDNMWSCNICFDTASEPVITQCGHLYCWSCIYRWMQSHSTQNL 176
Query: 57 KCPKCSASL 65
+CP C A +
Sbjct: 177 QCPVCKAGI 185
>gi|292626825|ref|XP_001344797.3| PREDICTED: tripartite motif-containing protein 16-like [Danio
rerio]
Length = 544
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNF 75
+ +CP+C +L+++ CGH++C +CI+ C + + CP+C + ++ N
Sbjct: 10 EFMCPVCLDLLKDPVTIPCGHSYCKTCITGCWDQEDDKRVYSCPQCREAFNPRPALAKNT 69
Query: 76 LLNELVQKHKIKSAQD 91
+L E+V+K K K D
Sbjct: 70 ILAEMVEKLKTKPPAD 85
>gi|354466499|ref|XP_003495711.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Cricetulus
griseus]
Length = 597
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK------CPKCSASLPDMNSVF 72
++ +LCPIC E+ R T CGH FC +C+ + Q CP+C P +
Sbjct: 40 EDQVLCPICLEVFRNPVTTSCGHNFCMTCLQNFWDHQAAIGETYYCPQCREMFPTRPRLC 99
Query: 73 PNFLLNELVQKHKIKSAQDSDGLRDFVA 100
N +L E+V Q S L +
Sbjct: 100 KNVILGEMVACFTQAKGQMSGPLWNLAG 127
>gi|119589240|gb|EAW68834.1| tripartite motif-containing 68, isoform CRA_a [Homo sapiens]
Length = 495
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQ 122
>gi|149744893|ref|XP_001487934.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Equus caballus]
Length = 716
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 420 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 479
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 480 MEELIAKFLPEELKERRRL 498
>gi|335306476|ref|XP_003360480.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Sus scrofa]
Length = 711
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 415 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 474
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 475 MEELIAKFLPEELKERRRL 493
>gi|47215678|emb|CAG04762.1| unnamed protein product [Tetraodon nigroviridis]
Length = 530
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQI-KCPKCSASLPDMNSVFPNFLL 77
++L CP+C EL R+ I CGH FC CI +C E +++ CPKC S + PN LL
Sbjct: 12 SELTCPVCLELFRDPVILDCGHHFCKVCIIQCWEAIEVSNCPKCRKSCE--RKLRPNSLL 69
Query: 78 NELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRK 122
+V+ ++ A+ +D + + DV LE L R+
Sbjct: 70 CNVVE--SVRKARTADAVPAGIVGW-------DVQSALEELEDRE 105
>gi|42601320|gb|AAS21347.1| hypothetical protein FLJ22612-like protein [Oikopleura dioica]
Length = 486
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM 68
DL CP+C + +T CGHTFC C+ + ++ KCP C SL D
Sbjct: 175 GDLECPLCLRVYWNPDVTPCGHTFCSDCLERTLDHDPKCPLCKYSLADF 223
>gi|410989317|ref|XP_004000909.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 [Felis catus]
Length = 491
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD---MNSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L N +
Sbjct: 195 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 254
Query: 77 LNELVQK 83
+ EL+ K
Sbjct: 255 MEELIAK 261
>gi|321257783|ref|XP_003193708.1| mRNA polyadenylation-related protein [Cryptococcus gattii WM276]
gi|317460178|gb|ADV21921.1| mRNA polyadenylation-related protein, putative [Cryptococcus gattii
WM276]
Length = 598
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 13 RQHSPPDNDLLCPICFELIREAHITRCGHT-FCFSCI-SKCVELQIKCPKCSASLPDMNS 70
R P + DL CP+C +L+ EA T C T FC C+ + V+ +CP C + +P ++
Sbjct: 313 RDQEPLEADLTCPLCKKLVWEAVRTPCCSTAFCEECVQTYLVDHDFECPHCESKVPSLDR 372
Query: 71 VFPNFLL---NELVQKHKIKSAQDSDG 94
+ P+ L + + H+++ +D+ G
Sbjct: 373 LKPDEDLRKRSRIYVDHELQKNKDAKG 399
>gi|296809169|ref|XP_002844923.1| DNA repair protein RAD5 [Arthroderma otae CBS 113480]
gi|238844406|gb|EEQ34068.1| DNA repair protein RAD5 [Arthroderma otae CBS 113480]
Length = 919
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
C IC E + IT C H+F +SCI + +ELQ KCP C A + D
Sbjct: 677 CSICLESLNNPVITPCAHSFDYSCIEQVIELQHKCPLCRAEIKD 720
>gi|327266310|ref|XP_003217949.1| PREDICTED: hypothetical protein LOC100552381 [Anolis carolinensis]
Length = 1113
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 22 LLCPICFELIRE-AHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNFLL 77
L CP+C +L R+ ++ CGH+ C +C+++C +++CP C LP + PN LL
Sbjct: 592 LRCPLCRDLFRDPVLLSGCGHSLCRACVAQCWAPFARRLRCPHCREPLPLQGLLQPNPLL 651
Query: 78 NELVQK 83
LVQ+
Sbjct: 652 GSLVQR 657
>gi|384487260|gb|EIE79440.1| hypothetical protein RO3G_04145 [Rhizopus delemar RA 99-880]
Length = 623
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
D +L CPIC ++++E T CGH+FC+ CI + ++ Q +CP
Sbjct: 71 DEELNCPICHDIMKEVIATTCGHSFCYECICEQIKYQPECP 111
>gi|313224371|emb|CBY20160.1| unnamed protein product [Oikopleura dioica]
Length = 461
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM 68
DL CP+C + +T CGHTFC C+ + ++ KCP C SL D
Sbjct: 175 GDLECPLCLRVYWNPDVTPCGHTFCSDCLERTLDHDPKCPLCKYSLADF 223
>gi|440799688|gb|ELR20732.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 208
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKC 58
SA+ST S SP C ICF+ ++ +T CGH FC+ CI K +EL Q C
Sbjct: 6 SASSTEKTSEGSGGSPASPAFECNICFDTAQDPVVTLCGHLFCWPCIYKWLELHPDQPSC 65
Query: 59 PKCSASL 65
P C A++
Sbjct: 66 PVCKAAI 72
>gi|336388095|gb|EGO29239.1| putative zinc-finger-containing protein [Serpula lacrymans var.
lacrymans S7.9]
Length = 240
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC--SASLPDMNSVFPNF 75
CP+C + + +TRCGH FC SCI + + CP C S SL + ++P F
Sbjct: 186 CPLCLDTTKALSVTRCGHIFCTSCIQRVFRTKRLCPVCRQSGSLKQLRKIYPTF 239
>gi|32425788|gb|AAH53494.1| Trim35 protein, partial [Mus musculus]
Length = 486
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCSA-SLPDMNSVFPNFLL 77
+LLC +C++ R+A RCGH FC C+S C E+Q CP C ++P + N L
Sbjct: 3 ELLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCPVCKERAVP--GELRTNHTL 60
Query: 78 NELVQ 82
N LV+
Sbjct: 61 NNLVE 65
>gi|240274021|gb|EER37539.1| DNA repair and recombination protein RAD5B [Ajellomyces capsulatus
H143]
Length = 294
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
+C IC + +++ IT C HTF +SCI + +E Q KCP C A + D S+
Sbjct: 51 ICAICLDTLQQPVITPCAHTFDYSCIEQAIEHQHKCPLCRAEIEDCKSLV 100
>gi|254585999|ref|XP_002498567.1| ZYRO0G13376p [Zygosaccharomyces rouxii]
gi|238941461|emb|CAR29634.1| ZYRO0G13376p [Zygosaccharomyces rouxii]
Length = 445
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSASL---PDMNSVFPNF 75
L+C IC +L+ +T+CGH +C+ C+S + ++ CP+C AS+ P +NSV +
Sbjct: 28 LICSICHDLMFVPVMTQCGHNYCYDCLSSWFDSNSNELSCPQCRASISDPPSLNSVLQQW 87
Query: 76 LLN--ELV 81
L++ ELV
Sbjct: 88 LVHIIELV 95
>gi|340055003|emb|CCC49311.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 444
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
L+CP+C++L+ CGH FC C ++C++++ +CP C+ S+ + P
Sbjct: 14 LMCPVCYDLLNNPVAFVCGHVFCCDCATRCIDIRPQCPLCNNSVNGIRCATP 65
>gi|111218593|ref|XP_646094.2| hypothetical protein DDB_G0270568 [Dictyostelium discoideum AX4]
gi|90970873|gb|EAL72634.2| hypothetical protein DDB_G0270568 [Dictyostelium discoideum AX4]
Length = 419
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
D+ CPIC I E CGH FC C+S+C+ KCP C+ +
Sbjct: 22 DISCPICLNFIEECSTLSCGHNFCHKCVSECINRNHKCPLCNKT 65
>gi|443732304|gb|ELU17075.1| hypothetical protein CAPTEDRAFT_201428 [Capitella teleta]
Length = 344
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 21 DLLCPICFELIREAHITR-CGHTFCFSCISKCV--ELQIKCPKCSASLPDMNSVFPNFLL 77
+ CPIC E+++EA I R CG++FC CI + CP+C A+ +++ N L
Sbjct: 239 EFKCPICREMLKEAAIIRCCGYSFCDDCIRDALLDSEHHTCPQCGAAGQSPDALVANKTL 298
Query: 78 NELVQKHKIKSAQDSDGLRDFVASESQNL 106
++V H ++ G R VA S +L
Sbjct: 299 RKMVDNH-----ENGTGWRSVVAKISASL 322
>gi|344236260|gb|EGV92363.1| Tripartite motif-containing protein 16 [Cricetulus griseus]
Length = 563
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK------CPKCSASLPDMNSVF 72
++ +LCPIC E+ R T CGH FC +C+ + Q CP+C P +
Sbjct: 43 EDQVLCPICLEVFRNPVTTSCGHNFCMTCLQNFWDHQAAIGETYYCPQCREMFPTRPRLC 102
Query: 73 PNFLLNELVQKHKIKSAQDSDGLRDFVA 100
N +L E+V Q S L +
Sbjct: 103 KNVILGEMVACFTQAKGQMSGPLWNLAG 130
>gi|260782668|ref|XP_002586406.1| hypothetical protein BRAFLDRAFT_252550 [Branchiostoma floridae]
gi|229271513|gb|EEN42417.1| hypothetical protein BRAFLDRAFT_252550 [Branchiostoma floridae]
Length = 684
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC--SASLPD--MNSVFPNFLL 77
L CP+C +L E I C HTFC +C+ K ++ ++ CP C +LP ++ + NF +
Sbjct: 15 LTCPVCNKLFCEPKILPCLHTFCKTCLEKWMKQKVSCPFCRTKVTLPSEGVSGLPTNFNI 74
Query: 78 NELVQKHKIKSAQD 91
N+L+ K++ +++
Sbjct: 75 NKLLDFRKLQKSKN 88
>gi|348507571|ref|XP_003441329.1| PREDICTED: E3 ubiquitin-protein ligase RAD18-like [Oreochromis
niloticus]
Length = 497
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L CPICF+ + + +T+C H FC CI K + +++CP C+ + + + + N LL++LV
Sbjct: 23 LRCPICFDFLNISMMTKCSHNFCSLCIRKFLSYKLQCPVCNTQMTEAD-LRNNRLLDDLV 81
>gi|395848815|ref|XP_003797038.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 1 [Otolemur garnettii]
Length = 771
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 475 SDLECALCMRLFFEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 534
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 535 MEELIAKFLPEELKERRRL 553
>gi|301786420|ref|XP_002928632.1| PREDICTED: e3 ubiquitin-protein ligase TRIM68-like [Ailuropoda
melanoleuca]
Length = 485
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-------IKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPVSIDCGHSFCHSCLSGLWEVPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR 96
N+ L +V+K ++ Q GL+
Sbjct: 72 NWQLANVVEKVRLLGLQPGMGLK 94
>gi|260809305|ref|XP_002599446.1| hypothetical protein BRAFLDRAFT_223862 [Branchiostoma floridae]
gi|229284725|gb|EEN55458.1| hypothetical protein BRAFLDRAFT_223862 [Branchiostoma floridae]
Length = 684
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC--SASLPD--MNSVFPNFLL 77
L CP+C +L E I C HTFC +C+ K ++ ++ CP C +LP ++ + NF +
Sbjct: 15 LTCPVCNKLFCEPKILPCLHTFCKTCLEKWMKQKVSCPFCRTKVTLPSEGVSGLPTNFNI 74
Query: 78 NELVQKHKIKSAQD 91
N+L+ K++ +++
Sbjct: 75 NKLLDFRKLQKSKN 88
>gi|403416620|emb|CCM03320.1| predicted protein [Fibroporia radiculosa]
Length = 1168
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CPICF+++ IT C H FC SCIS+ + KCP
Sbjct: 794 CPICFDIMDSPRITGCAHMFCLSCISEVITRDAKCP 829
>gi|400595143|gb|EJP62953.1| ATP-dependent protease La domain-containing protein [Beauveria
bassiana ARSEF 2860]
Length = 472
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC-----------SASLP-- 66
++L C +C+ L + T CGHTFC SC+ + ++ CP C AS P
Sbjct: 112 SELDCQVCYALYHDPLTTGCGHTFCRSCLHRILDHSRYCPICRRRLSINPLLNRASCPSN 171
Query: 67 -DMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQ----NLSLPDVNLMLEVLNQR 121
+ + F +EL + + A+++ L+DF E+ L+ P + L V R
Sbjct: 172 ASLTRIIETFWTDELASRKRAVEAEEAARLQDF---ETPLFVCTLAFPQMPTFLHVFEPR 228
Query: 122 KHLL 125
LL
Sbjct: 229 YRLL 232
>gi|330794275|ref|XP_003285205.1| hypothetical protein DICPUDRAFT_45964 [Dictyostelium purpureum]
gi|325084829|gb|EGC38248.1| hypothetical protein DICPUDRAFT_45964 [Dictyostelium purpureum]
Length = 419
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
D+ C +C +I CGH FCF C+S+CV KCP CS N V
Sbjct: 22 DIGCAVCLNIIESCSTLGCGHNFCFGCVSECVNRNHKCPLCSKPTTKENIV 72
>gi|395848817|ref|XP_003797039.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3 isoform 2 [Otolemur garnettii]
Length = 730
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 434 SDLECALCMRLFFEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 493
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 494 MEELIAKFLPEELKERRRL 512
>gi|218193137|gb|EEC75564.1| hypothetical protein OsI_12235 [Oryza sativa Indica Group]
Length = 640
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 4 TSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSA 63
TS +R+ + PD D C +CF+L+ E T CGH+FC SC+ + ++ KCP C
Sbjct: 334 TSIAARARRPTLDRPD-DFECTLCFKLLFEPVTTPCGHSFCRSCLHQSMDHGNKCPMCRT 392
Query: 64 SLPDMNSVFP-NFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLM 114
L +P + L+ ++QK+ + + SE + ++ V+LM
Sbjct: 393 VLFIGPKTYPISVTLSNIIQKNFPEEYAER-------KSEHETMTYAGVDLM 437
>gi|222625211|gb|EEE59343.1| hypothetical protein OsJ_11426 [Oryza sativa Japonica Group]
Length = 640
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 4 TSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSA 63
TS +R+ + PD D C +CF+L+ E T CGH+FC SC+ + ++ KCP C
Sbjct: 334 TSIAARARRPTLDRPD-DFECTLCFKLLFEPVTTPCGHSFCRSCLHQSMDHGNKCPMCRT 392
Query: 64 SLPDMNSVFP-NFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLM 114
L +P + L+ ++QK+ + + SE + ++ V+LM
Sbjct: 393 VLFIGPKTYPISVTLSNIIQKNFPEEYAER-------KSEHETMTYAGVDLM 437
>gi|328870338|gb|EGG18713.1| RING zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 377
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQ-IKCPKCSASLPDMNSVFPNFLLN-- 78
L CPIC ++ +A T CGHTFC C++ C+E + KCP CS D + V P F +
Sbjct: 11 LTCPICSDIFIDACDTSCGHTFCEFCLNSCLESRPDKCPVCSK---DPSPVHPAFTIRSI 67
Query: 79 -ELVQKHKI 86
E++Q HK
Sbjct: 68 CEVLQPHKT 76
>gi|432857066|ref|XP_004068521.1| PREDICTED: E3 ubiquitin-protein ligase RAD18-like [Oryzias
latipes]
Length = 492
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ L CPICF+ + + +T+C H FC CI K + +++CP C+ + + + + N +L+
Sbjct: 20 DSLLRCPICFDYVNISMMTKCSHNFCSLCIRKFLSYKLQCPVCNTPMTEQD-LRNNRILD 78
Query: 79 ELVQKHKIKSAQ 90
EL ++ Q
Sbjct: 79 ELTVNFQVARQQ 90
>gi|193786454|dbj|BAG51737.1| unnamed protein product [Homo sapiens]
Length = 485
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLREIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQ 122
>gi|326479548|gb|EGE03558.1| ATP-dependent protease CrgA [Trichophyton equinum CBS 127.97]
Length = 711
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLP 66
L++ S +L C +C+ L+ + + T CGHTFC SC+++ +++ CP C + LP
Sbjct: 195 LRKLRSAVVKELDCQVCYSLMTDPYTTVCGHTFCRSCVTRMLDISNICPVCRSKLP 250
>gi|326470631|gb|EGD94640.1| hypothetical protein TESG_02149 [Trichophyton tonsurans CBS 112818]
Length = 711
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLP 66
L++ S +L C +C+ L+ + + T CGHTFC SC+++ +++ CP C + LP
Sbjct: 195 LRKLRSAVVKELDCQVCYSLMTDPYTTVCGHTFCRSCVTRMLDISNICPVCRSKLP 250
>gi|315048349|ref|XP_003173549.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893]
gi|311341516|gb|EFR00719.1| DNA repair protein RAD5 [Arthroderma gypseum CBS 118893]
Length = 922
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
C IC E + IT C H F +SCI + +ELQ KCP C A + D
Sbjct: 680 CSICLESLNNPVITPCAHAFDYSCIEQTIELQHKCPLCRAEIKD 723
>gi|195130221|ref|XP_002009551.1| GI15418 [Drosophila mojavensis]
gi|193908001|gb|EDW06868.1| GI15418 [Drosophila mojavensis]
Length = 707
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 24 CPICFELI--REAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
CP+CFE + R+A T CGH FC+ CI + + CP C+A L SV
Sbjct: 653 CPVCFEYVTGRQAASTVCGHVFCWECILRVIRSNHMCPLCNARLASSRSV 702
>gi|213403296|ref|XP_002172420.1| peroxisome assembly protein [Schizosaccharomyces japonicus yFS275]
gi|212000467|gb|EEB06127.1| peroxisome assembly protein [Schizosaccharomyces japonicus yFS275]
Length = 303
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 18 PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
PD C +C EL+ + T CGH FC+ CI+ E Q +CP C
Sbjct: 247 PDKSRTCALCMELLHQPTATSCGHVFCWDCITGWTERQPECPMC 290
>gi|449271384|gb|EMC81800.1| Tripartite motif-containing protein 35, partial [Columba livia]
Length = 448
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-CPKCS--ASLPDMNSVFPNFLL 77
+LLCPIC+E REA CGH FC C+S+ E + CP C +S D+ N L
Sbjct: 10 ELLCPICYEPFREAVTLCCGHNFCKGCVSRSWEHRHHVCPVCKEPSSFDDLRV---NHTL 66
Query: 78 NELVQ 82
N LV+
Sbjct: 67 NNLVE 71
>gi|310795289|gb|EFQ30750.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 903
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
C +C + + IT C H FC CISK +E Q KCP C L
Sbjct: 664 CAVCLDTLNNPVITHCKHVFCRGCISKVIEAQHKCPMCRNQL 705
>gi|146175590|ref|XP_001019723.2| hypothetical protein TTHERM_00136420 [Tetrahymena thermophila]
gi|146144703|gb|EAR99478.2| hypothetical protein TTHERM_00136420 [Tetrahymena thermophila
SB210]
Length = 543
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
CPICF + ++CGH+FC SCI V+ CP C ++ +F NF +NE+
Sbjct: 395 CPICFLPFENCYTSKCGHSFCQSCIQSSVQKFGNCPVCQQNIS-QEDLFRNFHMNEI 450
>gi|395536534|ref|XP_003770270.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Sarcophilus
harrisii]
Length = 546
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 18 PD--NDLLCPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVF 72
PD N L CP+C E+ +E + +CGH++C C++ + Q+ CP C PD+++
Sbjct: 97 PDLANRLRCPVCLEVFKEPLMLQCGHSYCRDCLNALAHHLGSQLFCPVCRRVEPDVSNSP 156
Query: 73 PNFLLNELVQKHKIKSAQD 91
PN L ++++ + Q+
Sbjct: 157 PNVSLAQVIEALHLPGEQE 175
>gi|432880399|ref|XP_004073678.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Oryzias latipes]
Length = 717
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
DL C +C L E T CGHTFC C+ +C++ KCP C L +
Sbjct: 420 TDLECSLCMRLFYEPVTTPCGHTFCLQCLERCLDHNPKCPLCKEELSEYLVQRQYCKTVL 479
Query: 68 MNSVFPNFLLNELVQKHKI 86
M ++ +L + +++ KI
Sbjct: 480 MENLISKYLPSAFIERQKI 498
>gi|410913791|ref|XP_003970372.1| PREDICTED: zinc-binding protein A33-like [Takifugu rubripes]
Length = 474
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNFL 76
++L CP+C EL R+ I CGH FC CI +C +E+ CPKC S + PN L
Sbjct: 12 SELTCPVCLELFRDPVILECGHHFCKLCIIQCWGAIEVS-NCPKCRKSCE--RKLRPNSL 68
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRK 122
L +V+ ++ A+ SD + + DV LE L +R+
Sbjct: 69 LCNVVE--SVRKARTSDAVPAGIIGW-------DVESALEELEERE 105
>gi|308080596|ref|NP_001183915.1| uncharacterized protein LOC100502508 [Zea mays]
gi|238015412|gb|ACR38741.1| unknown [Zea mays]
Length = 263
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 26/49 (53%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
P + L CPIC I EA T CGH FC CI ++ Q KCP C L
Sbjct: 202 PKEPKLSCPICMNEITEAASTVCGHIFCQPCIKAAIKAQKKCPTCRRKL 250
>gi|414879006|tpg|DAA56137.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 260
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 26/49 (53%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
P + L CPIC I EA T CGH FC CI ++ Q KCP C L
Sbjct: 199 PKEPKLSCPICMNEITEAASTVCGHIFCQPCIKAAIKAQKKCPTCRRKL 247
>gi|403363185|gb|EJY81333.1| hypothetical protein OXYTRI_21156 [Oxytricha trifallax]
Length = 276
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
SA ST ++K+ +D CPIC E+I E +T C H FC SC + ++L CP C
Sbjct: 20 SAGSTTGGTVKKGK----DDFECPICLEIIAEPVMTPCKHLFCLSCQKQVLQLNATCPMC 75
>gi|444723991|gb|ELW64614.1| E3 ubiquitin-protein ligase RNF125 [Tupaia chinensis]
Length = 428
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 2 SATSTPS----RSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-L 54
S S PS R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++
Sbjct: 9 SGKSAPSSVTPRALERRGDPELPVTSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSLKNN 68
Query: 55 QIKCPKCSASLP 66
+ CP C ASLP
Sbjct: 69 KWTCPYCRASLP 80
>gi|396465588|ref|XP_003837402.1| hypothetical protein LEMA_P036360.1 [Leptosphaeria maculans JN3]
gi|312213960|emb|CBX93962.1| hypothetical protein LEMA_P036360.1 [Leptosphaeria maculans JN3]
Length = 564
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L C +C E + IT C HTFC CI +C+ KCP C + + PN + E+V
Sbjct: 101 LRCEVCKEFLSNPVITSCSHTFCSICIRRCITADGKCPSCKTGC-SSDKLTPNIAVREVV 159
Query: 82 QK 83
+
Sbjct: 160 MR 161
>gi|217075410|gb|ACJ86065.1| unknown [Medicago truncatula]
gi|388494518|gb|AFK35325.1| unknown [Medicago truncatula]
Length = 242
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
CPIC + E TRCGH FC SCI + Q KCP C
Sbjct: 187 CPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTC 224
>gi|378734090|gb|EHY60549.1| hypothetical protein, variant [Exophiala dermatitidis NIH/UT8656]
Length = 539
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 2 SATSTPSRSLK-----RQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI 56
SA+ST + L R+ + P+ L C +C++++ + T CGHTFC C + ++
Sbjct: 188 SASSTRAHDLAILESLRELTRPE--LECQVCYQMMLDPVTTSCGHTFCRKCFGRAMDHSS 245
Query: 57 KCPKCSASLPDMN---SVFPNFLLNEL 80
CP C LP + S+ N LLN+L
Sbjct: 246 YCPTCRRRLPRLPATLSMASNKLLNDL 272
>gi|345570617|gb|EGX53438.1| hypothetical protein AOL_s00006g304 [Arthrobotrys oligospora ATCC
24927]
Length = 454
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMN-SVFPNFLLNEL 80
L C +C EL +T CGHTFC CI +C+ KCP C PD + N +++EL
Sbjct: 26 LRCQVCKELFTAPKVTSCGHTFCSLCIRRCLSASSKCPTCMK--PDEEPRLRDNIVVSEL 83
Query: 81 V 81
V
Sbjct: 84 V 84
>gi|225428562|ref|XP_002284651.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 [Vitis vinifera]
gi|147795942|emb|CAN60863.1| hypothetical protein VITISV_016726 [Vitis vinifera]
Length = 229
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 3 ATSTPSR--SLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI---K 57
+TS PSR S +S D C ICFEL ++ +T CGH FC+ C+ + + + +
Sbjct: 8 STSGPSRGPSYTTNNSNDTGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHIHSHSHE 67
Query: 58 CPKCSASLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEV 117
CP C A LVQ+ K+ R S+ ++ S+P +N+
Sbjct: 68 CPVCKA----------------LVQEEKLVPLYG----RGKTPSDPRSRSVPGINIPNRP 107
Query: 118 LNQR 121
QR
Sbjct: 108 AGQR 111
>gi|225717742|gb|ACO14717.1| Postreplication repair E3 ubiquitin-protein ligase RAD18 [Caligus
clemensi]
Length = 350
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L C +C+E IR+ +T+C H+FC CI + + +++CP C L + N + PN L +++
Sbjct: 21 LSCSVCYETIRDPVLTKCSHSFCSLCIRRYLLYKLQCPSCFHELHE-NDLIPNKPLRDIL 79
Query: 82 QKHKI 86
Q+ I
Sbjct: 80 QQLAI 84
>gi|157822687|ref|NP_001101894.1| E3 ubiquitin-protein ligase RNF125 [Rattus norvegicus]
gi|149017049|gb|EDL76100.1| ring finger protein 125 (predicted) [Rattus norvegicus]
gi|171846898|gb|AAI62061.1| Ring finger protein 125 [Rattus norvegicus]
Length = 233
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 2 SATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-- 57
+ TS+ R+L+R P P C +C E++ + TRCGH FC SCI+ ++ K
Sbjct: 13 APTSSARRTLERSGDPELPITSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWT 72
Query: 58 CPKCSASLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEV 117
CP C A LP +E V I + SE QN + + ++ +
Sbjct: 73 CPYCRAYLP-----------SEGVPATDIAKR---------MKSEYQNCT--ECGTLVCL 110
Query: 118 LNQRKHLLEAESSVAQYKLLYEL 140
+ R H+ E + +Y L EL
Sbjct: 111 SDMRAHIRTCEKYIDKYGPLQEL 133
>gi|395826874|ref|XP_003786639.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Otolemur
garnettii]
Length = 621
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCPIC E+ T CGH FC +C+ + Q + CP+C + P +
Sbjct: 62 EDQVLCPICLEVFHNPVTTACGHNFCMTCLQGFWDHQTAMGETLYCPQCRENFPSRPRLC 121
Query: 73 PNFLLNELV------QKHKIKSAQDSDGLRD 97
N +L E+V + + S + G RD
Sbjct: 122 KNVILGEMVACFVQARGQAMGSLWNMAGPRD 152
>gi|395507044|ref|XP_003757838.1| PREDICTED: tripartite motif-containing protein 35 [Sarcophilus
harrisii]
Length = 415
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
+LLC IC++ R+A RCGH FC C+ +C ELQ P C
Sbjct: 18 ELLCAICYDPFRDAVTLRCGHNFCRGCVGRCWELQ-DAPAC 57
>gi|344269087|ref|XP_003406386.1| PREDICTED: E3 ubiquitin-protein ligase RNF125-like [Loxodonta
africana]
Length = 230
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCP 59
A++TP R L+R+ SP P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RDLERRGSPELPVTSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>gi|209733956|gb|ACI67847.1| Tripartite motif-containing protein 25 [Salmo salar]
Length = 386
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVFPN 74
+ C +C +L++E T CGH++C +CI C + + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVTTACGHSYCRNCIEGCWDQDVLKGVYSCPQCGETFTPRPNLRKN 70
Query: 75 FLLNELVQKHKIKSAQ 90
+L ELV+K K Q
Sbjct: 71 NMLAELVEKQKKTGLQ 86
>gi|217070974|gb|ACJ83847.1| unknown [Medicago truncatula]
Length = 247
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 22/40 (55%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
CPIC + E TRCGH FC SCI + Q KCP C
Sbjct: 190 FTCPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTC 229
>gi|444727849|gb|ELW68327.1| BTB/POZ domain-containing protein KCTD2 [Tupaia chinensis]
Length = 865
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCPIC E+ T CGH FC +C+ + Q + CP+C S P +
Sbjct: 334 EDQVLCPICLEVFCNPVTTACGHNFCMTCLQSFWDHQAAVGETLYCPQCRESFPSRPRLC 393
Query: 73 PNFLLNELVQKHKIKSAQDSDGLRDFVA 100
N +L E+V Q S L +
Sbjct: 394 KNVILGEMVACFTQAKGQASRPLWNLAG 421
>gi|378734091|gb|EHY60550.1| hypothetical protein HMPREF1120_08505 [Exophiala dermatitidis
NIH/UT8656]
Length = 548
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 2 SATSTPSRSLK-----RQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI 56
SA+ST + L R+ + P+ L C +C++++ + T CGHTFC C + ++
Sbjct: 188 SASSTRAHDLAILESLRELTRPE--LECQVCYQMMLDPVTTSCGHTFCRKCFGRAMDHSS 245
Query: 57 KCPKCSASLPDMN---SVFPNFLLNEL 80
CP C LP + S+ N LLN+L
Sbjct: 246 YCPTCRRRLPRLPATLSMASNKLLNDL 272
>gi|348533582|ref|XP_003454284.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1 [Oreochromis niloticus]
Length = 731
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
NDL C +C L E T CGHTFC +C+ +C++ +CP C SL +
Sbjct: 433 NDLECSLCMRLFYEPVTTPCGHTFCKNCLERCLDHMPQCPLCKESLKE 480
>gi|341893707|gb|EGT49642.1| hypothetical protein CAEBREN_14529 [Caenorhabditis brenneri]
Length = 586
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 11 LKRQHSPPD-ND-----LLCPICFELIREA-HITRCGHTFCFSCISKCVELQIKCPKCSA 63
LKR PP ND L CPIC+ ++ I CGHTFCF C+++ L KCP C
Sbjct: 463 LKRLLKPPQINDKIMECLECPICYRTYKDIPRILHCGHTFCFECLNQLTNL--KCPFCCK 520
Query: 64 SLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRD 97
+ S N+ L +++ KS SD R+
Sbjct: 521 AFA-RGSATQNYALMNVIEAVSPKSTDRSDRARN 553
>gi|302505721|ref|XP_003014567.1| hypothetical protein ARB_07129 [Arthroderma benhamiae CBS 112371]
gi|291178388|gb|EFE34178.1| hypothetical protein ARB_07129 [Arthroderma benhamiae CBS 112371]
Length = 921
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
C IC E + IT C H F +SCI + +ELQ KCP C A + D
Sbjct: 679 CSICLESLDNPVITPCAHAFDYSCIEQTIELQHKCPLCRAEIKD 722
>gi|409045104|gb|EKM54585.1| hypothetical protein PHACADRAFT_197015 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1202
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CP+CF ++ E IT C H FC +CI++ + KCP
Sbjct: 827 CPVCFGIVDEPRITSCSHVFCLACITEVISRDPKCP 862
>gi|149588816|ref|XP_001517507.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21-like
[Ornithorhynchus anatinus]
Length = 342
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSVFPNFLLNE 79
++ CPIC E E +CGH+FC CISK E CP+C AS + PN L
Sbjct: 13 EMTCPICLEFSGEPMSIKCGHSFCHRCISKLWREGHSSCPECRASF-QQEDIRPNRQLGN 71
Query: 80 LVQKHK 85
LV+ K
Sbjct: 72 LVESLK 77
>gi|355566812|gb|EHH23191.1| E3 ubiquitin-protein ligase TRIM68 [Macaca mulatta]
Length = 512
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPVSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCECHGEKLKMFCKEDVLIMCEACSQ 122
>gi|326468579|gb|EGD92588.1| SNF2 family helicase [Trichophyton tonsurans CBS 112818]
Length = 921
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
C IC E + IT C H F +SCI + +ELQ KCP C A + D
Sbjct: 679 CSICLESLDNPVITPCAHAFDYSCIEQTIELQHKCPLCRAEIKD 722
>gi|302658647|ref|XP_003021025.1| hypothetical protein TRV_04890 [Trichophyton verrucosum HKI 0517]
gi|291184900|gb|EFE40407.1| hypothetical protein TRV_04890 [Trichophyton verrucosum HKI 0517]
Length = 921
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
C IC E + IT C H F +SCI + +ELQ KCP C A + D
Sbjct: 679 CSICLESLDNPVITPCAHAFDYSCIEQTIELQHKCPLCRAEIKD 722
>gi|114606233|ref|XP_001148040.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 isoform 1 [Pan
troglodytes]
Length = 474
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|440895200|gb|ELR47461.1| Tripartite motif-containing protein 65, partial [Bos grunniens
mutus]
Length = 506
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-CPKCSASLPDMNSVFPNFLL 77
++ L C IC EL +E CGH FC +CI L K CP+C PD + N L
Sbjct: 7 EDKLTCSICLELYKEPVTLLCGHNFCGACIRDWWGLCEKVCPECREPFPDGAELRRNVAL 66
Query: 78 NELVQKHKIKSAQDSD---GLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+ +V++ + D G R + ++ L + V + E + LL+AE +
Sbjct: 67 SGVVEELRATPGPGPDPRHGARGPLFCRTEGLCVCCVCTVRECRLHERVLLDAERRAREA 126
Query: 135 KL 136
+L
Sbjct: 127 QL 128
>gi|327300653|ref|XP_003235019.1| SNF2 family helicase [Trichophyton rubrum CBS 118892]
gi|326462371|gb|EGD87824.1| SNF2 family helicase [Trichophyton rubrum CBS 118892]
Length = 920
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
C IC E + IT C H F +SCI + +ELQ KCP C A + D
Sbjct: 678 CSICLESLDNPVITPCAHAFDYSCIEQTIELQHKCPLCRAEIKD 721
>gi|118100004|ref|XP_415709.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Gallus gallus]
Length = 492
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNF 75
++ LLCPIC E+ +E + +CGH++C SC+ S ++ Q+ CP C S+ D ++ PN
Sbjct: 11 EDQLLCPICLEVFKEPLMLQCGHSYCKSCVLSLSGELDEQLLCPVCRKSV-DCSASPPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 TLARIIE 76
>gi|870839|emb|CAA90033.1| NUVA [Emericella nidulans]
Length = 356
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P + L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APFETSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPTCRSSDQEL-KLRRNW 80
Query: 76 LLNELVQKHK 85
++ ELV+ K
Sbjct: 81 VVQELVEGFK 90
>gi|344291438|ref|XP_003417442.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Loxodonta
africana]
Length = 562
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK------CPKCSASLPDMNSVFP 73
+ +LCPIC E+ T CGH FC +C+ + Q CP+C S P +
Sbjct: 4 DQVLCPICLEVFHNPVTTACGHNFCMACLQGFWDHQTAMGEIPYCPQCRQSFPSRPRLCK 63
Query: 74 NFLLNELVQKHKIKSAQDSDGLRDFVA 100
N +L E+V Q S L++
Sbjct: 64 NVILGEMVACFIQNKGQVSRSLQNVAG 90
>gi|20386036|gb|AAM21558.1|AF446007_1 MEK1 interacting protein 1 [Dictyostelium discoideum]
Length = 577
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
+L CPICFE + T CGH FC CI ++ + CP C+A L N + F+ N L
Sbjct: 509 NLECPICFEDTKPYVSTLCGHIFCSDCIVNALKKKKSCPVCNAKLHGKNLIIL-FIFNNL 567
Query: 81 VQ 82
Q
Sbjct: 568 AQ 569
>gi|427783167|gb|JAA57035.1| Putative e3 ubiquitin-protein ligase rnf8-b [Rhipicephalus
pulchellus]
Length = 320
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
++R S +N+L C IC EL +A + +CGHTFC CI + + CP C A++ +S
Sbjct: 221 VRRVESIMENELTCAICSELFVDAAMLQCGHTFCSYCIHNWRKQKNVCPFCLAAI---SS 277
Query: 71 VFPNFLLNELVQK 83
V +F+++ ++ +
Sbjct: 278 VTRSFVVDNIIDE 290
>gi|119482217|ref|XP_001261137.1| DNA repair protein (RadR), putative [Neosartorya fischeri NRRL
181]
gi|119409291|gb|EAW19240.1| DNA repair protein (RadR), putative [Neosartorya fischeri NRRL
181]
Length = 418
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
SP ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 SPLESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELVQ 82
+ ELV+
Sbjct: 81 AVQELVE 87
>gi|397519274|ref|XP_003829791.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Pan paniscus]
Length = 460
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV-RKNAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|402894457|ref|XP_003910374.1| PREDICTED: E3 ubiquitin-protein ligase TRIM68 [Papio anubis]
Length = 485
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPVSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCECHGEKLKMFCKEDVLIMCEACSQ 122
>gi|146104284|ref|XP_001469784.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134074154|emb|CAM72896.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 306
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
SPP D C ICF+ E +TRCGH FC+ C+ + P+C
Sbjct: 5 SPPAVDFSCAICFDTATEPVVTRCGHLFCWECLDHWLHSAAGAPEC 50
>gi|386781712|ref|NP_001247661.1| E3 ubiquitin-protein ligase TRIM68 [Macaca mulatta]
gi|383419581|gb|AFH33004.1| E3 ubiquitin-protein ligase TRIM68 [Macaca mulatta]
Length = 485
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPVSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCECHGEKLKMFCKEDVLIMCEACSQ 122
>gi|451856092|gb|EMD69383.1| hypothetical protein COCSADRAFT_76992 [Cochliobolus sativus
ND90Pr]
Length = 472
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
P + L C +C E IT C HTFC CI +C+ KCP C + + PN
Sbjct: 23 PLEAALRCEVCKEFYHNPVITSCSHTFCSICIRRCIASDGKCPSCKTGCSS-DKLAPNIA 81
Query: 77 LNELVQKHK 85
+ E+V + +
Sbjct: 82 VREVVMRFQ 90
>gi|380814226|gb|AFE78987.1| E3 ubiquitin-protein ligase TRIM68 [Macaca mulatta]
Length = 485
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPVSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCECHGEKLKMFCKEDVLIMCEACSQ 122
>gi|397520569|ref|XP_003830387.1| PREDICTED: E3 ubiquitin-protein ligase RNF125 [Pan paniscus]
Length = 214
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 5 STPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPKC 61
S +R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP C
Sbjct: 16 SATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYC 75
Query: 62 SASLP 66
A LP
Sbjct: 76 RAYLP 80
>gi|343425831|emb|CBQ69364.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1176
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 9 RSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM 68
+S+ HS L C +C+ L+ + T CGHTFC SC ++ ++ +CP C A +P+
Sbjct: 681 QSVATLHSELVEVLECQLCYLLLYDPLTTPCGHTFCKSCFARSLDHGDRCPLCRADMPNF 740
Query: 69 NSVF----PNFLLNELVQKHKI----KSAQDSDGLRD 97
S F PN L +++ + A DSD +D
Sbjct: 741 -SFFQDHRPNAALLKVLTSDTATFSDEDAMDSDSTQD 776
>gi|317418893|emb|CBN80931.1| Uncharacterized protein [Dicentrarchus labrax]
Length = 512
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL--QIKCPKCSASLPDMNSVFPNFLLN 78
+L CPIC EL E CGH +C +C+ E Q CP+C A P ++ +F +
Sbjct: 20 ELTCPICLELFSEPVSLPCGHIYCLACLQTMGEGLDQHSCPECQAEYPGTKALVRSFKMC 79
Query: 79 ELVQKHKIKSAQ 90
+++ +K +
Sbjct: 80 SIIESYKATDGK 91
>gi|432864472|ref|XP_004070313.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Oryzias
latipes]
Length = 546
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISK---CVELQIK----CPKCSASLPDMNSVFP 73
+L CPIC +L ++ + CGH +C CISK V++ K CP+C M+S+
Sbjct: 13 ELSCPICLQLYQDPVVLPCGHNYCRDCISKSSDTVDVSSKVLPRCPECREEFNGMDSLQK 72
Query: 74 NFLLNELVQKHKIKSA 89
NF L +++ ++ SA
Sbjct: 73 NFKLCNIIEGYRSSSA 88
>gi|355744917|gb|EHH49542.1| E3 ubiquitin-protein ligase TRIM68 [Macaca fascicularis]
Length = 485
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPVSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQ 120
N+ L +V+K ++ GL+ D + L + DV +M E +Q
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCECHGEKLKMFCKEDVLIMCEACSQ 122
>gi|255983031|emb|CAP08981.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 217
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
+ C +C +L++E T CGH++C SCI C + CP+C + P + N
Sbjct: 11 DQFCCSVCLDLLKEPVTTACGHSYCRSCIEGCWDQDDLKGVYSCPQCRHTFPTRPMLMKN 70
Query: 75 FLLNELVQKHKIKSAQ 90
+L E+V+K K Q
Sbjct: 71 NMLAEVVEKLKKTGLQ 86
>gi|326665210|ref|XP_003197990.1| PREDICTED: tripartite motif-containing protein 16-like [Danio
rerio]
Length = 571
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
N C +C +L++E CGH++C +CI+ C CP+C + ++ N
Sbjct: 11 NQFSCSVCLDLLKEPVTIPCGHSYCMNCITDCWNQDEQRRVYSCPQCRQTFTPRPALGKN 70
Query: 75 FLLNELVQKHKIKSAQDSDGLRDFVA 100
+L E+V+K K+ Q D +
Sbjct: 71 TMLAEVVEKVKMTKVQKVDSAPSYAG 96
>gi|326665625|ref|XP_003198077.1| PREDICTED: hypothetical protein LOC100001445 [Danio rerio]
Length = 661
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
N +CP+C +L+++ CGH++C SCI+ C + CP C S ++ N
Sbjct: 11 NQFMCPVCLDLLQDPVTIPCGHSYCMSCITDCWNQEEQKRIYSCPLCKQSFTPRPALAKN 70
Query: 75 FLLNELVQK 83
+L E+++K
Sbjct: 71 VVLAEMLEK 79
>gi|328722358|ref|XP_003247557.1| PREDICTED: hypothetical protein LOC100569916 [Acyrthosiphon pisum]
Length = 387
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
++DL CPIC E + +A C HTFC +CI K +++ CP C S+
Sbjct: 102 NSDLQCPICNEWLFKATSANCNHTFCETCIKKWLKINKTCPVCRTSI 148
>gi|317157063|ref|XP_003190799.1| ATP-dependent protease (CrgA) [Aspergillus oryzae RIB40]
Length = 547
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV-------- 71
N+L C +C+ LI + T CGHTFC C++ ++ CP C L ++V
Sbjct: 221 NELDCQVCYSLILDPLTTSCGHTFCRRCVAMALDHSDLCPACRRKLNMASTVKSEPTNKR 280
Query: 72 ---FPNFLLNELVQKHKIKSAQDSDGLRD------FVASESQNLSLPDVNLMLEVLNQRK 122
L E V + SAQ+ L D FV+S LSLP + L V R
Sbjct: 281 ISDIIETLYPEQVALRRDTSAQEVTALDDEAILPLFVSS----LSLPTMPTFLHVFEARY 336
Query: 123 HLL 125
L+
Sbjct: 337 RLM 339
>gi|260809861|ref|XP_002599723.1| hypothetical protein BRAFLDRAFT_249727 [Branchiostoma floridae]
gi|229285004|gb|EEN55735.1| hypothetical protein BRAFLDRAFT_249727 [Branchiostoma floridae]
Length = 681
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKC--SASLPD--MNSVF 72
D L CP+C R+ I C HTFC C+ + V Q ++CP C SLPD ++ +
Sbjct: 13 DQFLTCPVCMPHFRDPRILPCLHTFCKGCLEEWVTKQQPLECPTCRTQVSLPDQGVDGLK 72
Query: 73 PNFLLNELV 81
NF +N L+
Sbjct: 73 TNFYVNNLL 81
>gi|452837673|gb|EME39615.1| hypothetical protein DOTSEDRAFT_48065 [Dothistroma septosporum
NZE10]
Length = 543
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIK-CPKCSASLPDMNSVFPNFLLNE 79
+ C IC + E + CGHTFC+SC+S+ + + +IK CP C + D + P++L+ E
Sbjct: 86 ITCKICQRFLYEPYALTCGHTFCYSCLSQWMGQNKIKTCPDCRTVIRDEPA--PSYLIRE 143
Query: 80 LVQKHKIKSAQDSDG 94
LV +SA DG
Sbjct: 144 LVLIFVGRSALLPDG 158
>gi|350634004|gb|EHA22368.1| hypothetical protein ASPNIDRAFT_192821 [Aspergillus niger ATCC
1015]
Length = 917
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
CPIC + + + IT C H F CI + +E Q KCP C A + D ++
Sbjct: 674 CPICLDNLEQPVITACAHAFDRPCIEQVIERQHKCPMCRAEIQDTTTL 721
>gi|326931128|ref|XP_003211686.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Meleagris
gallopavo]
Length = 818
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNF 75
++ LLCPIC E+ +E + +CGH++C SC+ S ++ Q CP C S+ D ++ PN
Sbjct: 11 EDQLLCPICLEVFKEPLMLQCGHSYCKSCVLSLSGELDEQFLCPVCRKSV-DCSASPPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 TLARIIE 76
>gi|317037066|ref|XP_001398335.2| SNF2 family helicase [Aspergillus niger CBS 513.88]
Length = 917
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
CPIC + + + IT C H F CI + +E Q KCP C A + D ++
Sbjct: 674 CPICLDNLEQPVITACAHAFDRPCIEQVIERQHKCPMCRAEIQDTTTL 721
>gi|255983051|emb|CAP08991.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 217
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
+ C +C +L++E T CGH++C SCI C + CP+C + P + N
Sbjct: 11 DQFCCSVCLDLLKEPVTTACGHSYCRSCIEGCWDQDDLKGVYSCPQCRHTFPTRPMLMKN 70
Query: 75 FLLNELVQKHKIKSAQ 90
+L E+V+K K Q
Sbjct: 71 NMLAEVVEKLKKTGLQ 86
>gi|224116030|ref|XP_002317189.1| predicted protein [Populus trichocarpa]
gi|222860254|gb|EEE97801.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCV------ELQIKCPKCSASLPDMNSVF 72
D DL PIC ++I++A +T CGH+F + + + CP C+ L N +F
Sbjct: 31 DKDLF-PICMQIIKDASVTSCGHSFLMPPTTSLLLHVHYYSFKNDCPCCAHYLT-YNHIF 88
Query: 73 PNFLLNELVQ----KHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
PN LLN+L++ + K+A + LR + + +S V+ ++ +L ++ +E E
Sbjct: 89 PNVLLNKLLERTYARQVAKTASPYEHLRQAL-QQGCGVSFTVVDGLMALLAEKTRKMEQE 147
Query: 129 SSVAQYKLLYEL 140
+ ++L +
Sbjct: 148 EADTNMRILLDF 159
>gi|71002652|ref|XP_756007.1| DNA repair protein (RadR) [Aspergillus fumigatus Af293]
gi|74674926|sp|Q4WZJ6.1|RAD18_ASPFU RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
rad18
gi|66853645|gb|EAL93969.1| DNA repair protein (RadR), putative [Aspergillus fumigatus Af293]
gi|159130060|gb|EDP55174.1| DNA repair protein (RadR), putative [Aspergillus fumigatus A1163]
Length = 418
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
SP ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 SPLESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELVQ 82
+ ELV+
Sbjct: 81 AVQELVE 87
>gi|378730613|gb|EHY57072.1| hypothetical protein HMPREF1120_05122 [Exophiala dermatitidis
NIH/UT8656]
Length = 1014
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
C +C + ++ IT C H FC CI + +E Q KCP C A L +++ +
Sbjct: 769 CCVCLDSLKGPVITACAHVFCRDCIQRVIETQRKCPMCRAELTNVDQL 816
>gi|301101684|ref|XP_002899930.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102505|gb|EEY60557.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 388
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 21 DLLCPICFELIREAHIT-RCGHTFCFSCISKCVELQIK-CPKCSASLPDMNSVFPNFLLN 78
DL CPIC +I+E + C H FC CIS + + CP C +P S+ P+ +
Sbjct: 74 DLTCPICLGIIKETMVVMECLHRFCGECISTAIRHSNRECPSCRIHIPSKRSLRPDANFD 133
Query: 79 ELVQK-HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLL 137
L++K H L +F +E Q ++E +N+ +H A + A+ +L
Sbjct: 134 ALIRKIHP--------NLAEFERNEDQ---------IIEKVNRTRHFHNAYTESARMGVL 176
>gi|238493275|ref|XP_002377874.1| ATP-dependent protease (CrgA), putative [Aspergillus flavus
NRRL3357]
gi|220696368|gb|EED52710.1| ATP-dependent protease (CrgA), putative [Aspergillus flavus
NRRL3357]
Length = 547
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV-------- 71
N+L C +C+ LI + T CGHTFC C++ ++ CP C L ++V
Sbjct: 221 NELDCQVCYSLILDPLTTSCGHTFCRRCVAMALDHSDLCPACRRKLNMASTVKSEPTNKR 280
Query: 72 ---FPNFLLNELVQKHKIKSAQDSDGLRD------FVASESQNLSLPDVNLMLEVLNQRK 122
L E V + SAQ+ L D FV+S LSLP + L V R
Sbjct: 281 ISDIIETLYPEQVALRRDTSAQEVTALDDEAILPLFVSS----LSLPTMPTFLHVFEARY 336
Query: 123 HLL 125
L+
Sbjct: 337 RLM 339
>gi|169611236|ref|XP_001799036.1| hypothetical protein SNOG_08728 [Phaeosphaeria nodorum SN15]
gi|160702253|gb|EAT83896.2| hypothetical protein SNOG_08728 [Phaeosphaeria nodorum SN15]
Length = 1282
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L C +C E + IT C HTFC CI +C+ KCP C + + + PN + E+V
Sbjct: 654 LRCEVCKEFLSNPVITSCSHTFCSICIRRCIATDGKCPSCKTAC-SSDKLAPNIAVREVV 712
Query: 82 QK 83
+
Sbjct: 713 MR 714
>gi|86171667|ref|XP_966256.1| c3h4-type ring finger protein, putative [Plasmodium falciparum 3D7]
gi|46361225|emb|CAG25086.1| c3h4-type ring finger protein, putative [Plasmodium falciparum 3D7]
Length = 449
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
N C ICF+ +R+ +T+CGH FC+ C+S ++ CP C A + N +
Sbjct: 286 NTFECNICFDDVRDPVVTKCGHLFCWLCLSAWIKKNNDCPVCKAEVSKENVI 337
>gi|363735972|ref|XP_422114.3| PREDICTED: E3 ubiquitin-protein ligase DTX3L [Gallus gallus]
Length = 594
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 19 DNDLLCPICFELIREAHI-TRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLL 77
D D CPIC E I + I T+C H FC SCI K +E + CP C+ + P+ +
Sbjct: 410 DTDDTCPICMEKIVDKEILTKCKHVFCKSCIKKALEYKQTCPVCNTVYGLVQGDQPDGRM 469
Query: 78 N 78
N
Sbjct: 470 N 470
>gi|395547126|ref|XP_003775152.1| PREDICTED: uncharacterized protein LOC100931444, partial [Sarcophilus
harrisii]
Length = 1797
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 2 SATSTPSRSLKRQ---HSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKC 58
S S+ +R+ R+ S +DL CP+C L E T CGHTFC C+ K ++ C
Sbjct: 1458 SGGSSRARNYSRKVPFQSFDPSDLDCPLCMRLFYEPVTTPCGHTFCMKCLEKSLDRSPIC 1517
Query: 59 PKCSASLPD--MNSVFPNFLLNELVQKH 84
P C L + + N L+ L+ K+
Sbjct: 1518 PLCKEDLEEQCIRRCNKNLLMEALIAKY 1545
>gi|300797540|ref|NP_001178514.1| LON peptidase N-terminal domain and RING finger protein 3 [Rattus
norvegicus]
Length = 757
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCS----ASLPD-------- 67
+DL C +C L E T CGHTFC C+ +C++ KCP C LP
Sbjct: 461 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVLLQCLPSRKYSKNVI 520
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 521 MEELIAKFLPEELKERRRL 539
>gi|134083904|emb|CAK48808.1| unnamed protein product [Aspergillus niger]
Length = 875
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
CPIC + + + IT C H F CI + +E Q KCP C A + D ++
Sbjct: 632 CPICLDNLEQPVITACAHAFDRPCIEQVIERQHKCPMCRAEIQDTTTL 679
>gi|393240398|gb|EJD47924.1| DWNN-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 578
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 4 TSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRC-GHTFCFSCI-SKCVELQIKCPKC 61
T T + + R P D L C +C L REA T C G +C CI + +E +CP C
Sbjct: 288 TKTLTEADIRAKPPLDASLACSLCSRLFREAVKTPCCGAVYCEECIQTHLLEHDFECPAC 347
Query: 62 SASLPDMNSVFPNFLLNELVQKHKIKSAQDS 92
+ +P ++ + P VQ H K+ +S
Sbjct: 348 HSKIPSLDKLIPEKASRARVQAHIDKALAES 378
>gi|67900644|ref|XP_680578.1| UVSH_EMENI Postreplication repair protein uvsH/nuvA [Aspergillus
nidulans FGSC A4]
gi|40742170|gb|EAA61360.1| UVSH_EMENI Postreplication repair protein uvsH/nuvA [Aspergillus
nidulans FGSC A4]
Length = 450
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P + L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APFETSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPTCRSSDQEL-KLRRNW 80
Query: 76 LLNELVQKHK 85
++ ELV+ K
Sbjct: 81 VVQELVEGFK 90
>gi|47229614|emb|CAG06810.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCS--ASLPDMNSVFPNFL 76
DN L CPICF+ + +T+C H FC CI K ++ CP C+ AS D+ + N L
Sbjct: 6 DNLLRCPICFDFLNITMMTKCSHNFCSLCIRKFFSYKLLCPVCNTQASEQDLRN---NRL 62
Query: 77 LNELV 81
L++LV
Sbjct: 63 LDDLV 67
>gi|389584554|dbj|GAB67286.1| c3h4-type ring finger protein [Plasmodium cynomolgi strain B]
Length = 488
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK 83
C ICF+ +R+ +T+CGH FC+ C+S ++ CP C A + N V P + + +
Sbjct: 333 CNICFDDVRDPVVTKCGHLFCWLCLSAWIKKNNDCPVCKAEVSREN-VIPLYGRGKNSSE 391
Query: 84 HKIKSAQD 91
HK + ++
Sbjct: 392 HKYSNVEE 399
>gi|398024314|ref|XP_003865318.1| hypothetical protein, conserved [Leishmania donovani]
gi|322503555|emb|CBZ38641.1| hypothetical protein, conserved [Leishmania donovani]
Length = 300
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
SPP D C ICF+ E +TRCGH FC+ C+ + P+C
Sbjct: 5 SPPAVDFSCAICFDTATEPVVTRCGHLFCWECLDHWLHSAAGAPEC 50
>gi|189205647|ref|XP_001939158.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975251|gb|EDU41877.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 432
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L C IC E IT C HTFC CI +C+ + KCP C S+ + + PN + E+V
Sbjct: 28 LRCEICKEFYNNPVITLCHHTFCSICIRRCITMDGKCPSC-MSVCSSDKLGPNIAIREVV 86
>gi|440794575|gb|ELR15735.1| Ubox domain containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 909
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Query: 1 MSATSTPS-RSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
+ AT TP+ SL R ++ L+ PI EL+++ + CGH+F I+K ++ Q KCP
Sbjct: 153 LGATPTPTTSSLSRSM---EDLLIDPISLELMKKPVMLPCGHSFSRRTITKWLQQQNKCP 209
Query: 60 KC--SASLPDMNSVFPNFLLNELVQKH 84
C +A++ DM PN+ L +V+++
Sbjct: 210 SCNTTATVEDMQ---PNYALRAVVRQY 233
>gi|149720872|ref|XP_001495403.1| PREDICTED: e3 ubiquitin-protein ligase RNF125-like [Equus
caballus]
Length = 232
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCP 59
A++TP R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRRDPELPVTSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>gi|30584893|gb|AAP36702.1| Homo sapiens tripartite motif-containing 31 [synthetic construct]
gi|61370435|gb|AAX43495.1| tripartite motif-containing 31 [synthetic construct]
Length = 426
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|62897017|dbj|BAD96449.1| tripartite motif protein 31 isoform alpha variant [Homo sapiens]
Length = 425
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|390604229|gb|EIN13620.1| hypothetical protein PUNSTDRAFT_117342 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 268
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 19 DNDLLCPICFELIREAHI-TRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPN 74
+ +L C IC+++ AH+ CGH++C C ++ + +CP C ASL + PN
Sbjct: 95 EEELTCSICYDIFAAAHLGVPCGHSWCGECGLDWIQREKRVPRCPICRASLSKKAPMSPN 154
Query: 75 FLLNELVQKH 84
+ L+ +V+K+
Sbjct: 155 YALDSIVEKY 164
>gi|62865604|ref|NP_008959.3| E3 ubiquitin-protein ligase TRIM31 [Homo sapiens]
gi|68068082|sp|Q9BZY9.2|TRI31_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM31; AltName:
Full=Tripartite motif-containing protein 31
gi|86197929|dbj|BAE78603.1| tripartite motif-containing 31 [Homo sapiens]
gi|123231709|emb|CAM26290.1| tripartite motif-containing 31 [Homo sapiens]
gi|158261563|dbj|BAF82959.1| unnamed protein product [Homo sapiens]
gi|261859140|dbj|BAI46092.1| tripartite motif-containing 31 [synthetic construct]
Length = 425
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|119623664|gb|EAX03259.1| tripartite motif-containing 31, isoform CRA_c [Homo sapiens]
Length = 425
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|16877522|gb|AAH17017.1| Tripartite motif-containing 31 [Homo sapiens]
gi|30582189|gb|AAP35321.1| tripartite motif-containing 31 [Homo sapiens]
gi|61360717|gb|AAX41911.1| tripartite motif-containing 31 [synthetic construct]
gi|61360720|gb|AAX41912.1| tripartite motif-containing 31 [synthetic construct]
gi|123995881|gb|ABM85542.1| tripartite motif-containing 31 [synthetic construct]
Length = 425
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|395814943|ref|XP_003780996.1| PREDICTED: E3 ubiquitin-protein ligase TRIM68 [Otolemur
garnettii]
Length = 485
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFPNFL 76
CPIC +R+ CGH+FC C+S+ E+ CP C A + MN + PN+
Sbjct: 16 CPICMTFLRDPVSIDCGHSFCHGCLSRLWEVPGESQNWAYTCPLCRAPVQPMN-LRPNWQ 74
Query: 77 LNELVQKHKIKSAQDSDGLRDFV 99
L +++K ++ GL+ V
Sbjct: 75 LANIIEKVRLLRLHPGMGLKGDV 97
>gi|353236482|emb|CCA68476.1| related to helicase-like transcription factor [Piriformospora
indica DSM 11827]
Length = 1045
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CPICFE + + IT C H FC CI + + Q KCP
Sbjct: 747 CPICFEALTDPRITTCAHRFCLECIVETINRQQKCP 782
>gi|449492666|ref|XP_004159066.1| PREDICTED: U-box domain-containing protein 40-like [Cucumis
sativus]
Length = 554
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
+LLCPI L+ + I GHTF +C+ C +L +K S PD +SV PN L
Sbjct: 68 ELLCPITGSLMADPVIVSSGHTFEAACVQVCKDLGVKPTLLDGSKPDFSSVIPNLALKST 127
Query: 81 V 81
+
Sbjct: 128 I 128
>gi|308501841|ref|XP_003113105.1| CRE-NHL-1 protein [Caenorhabditis remanei]
gi|308265406|gb|EFP09359.1| CRE-NHL-1 protein [Caenorhabditis remanei]
Length = 986
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSA--SLP--DMNSVFPN 74
L CPIC + ++ + C HTFC+ C+ C + +KCP+C A ++P + + PN
Sbjct: 41 LTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYDGVKAFQPN 100
Query: 75 FLLNELVQKHKIKSAQDSDGLRDFV 99
+ L ++ H + + S + +++
Sbjct: 101 YTLTGFLEIHLQATPESSAEIEEYI 125
>gi|449449182|ref|XP_004142344.1| PREDICTED: U-box domain-containing protein 40-like [Cucumis
sativus]
Length = 554
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
+LLCPI L+ + I GHTF +C+ C +L +K S PD +SV PN L
Sbjct: 68 ELLCPITGSLMADPVIVSSGHTFEAACVQVCKDLGVKPTLLDGSKPDFSSVIPNLALKST 127
Query: 81 V 81
+
Sbjct: 128 I 128
>gi|358057550|dbj|GAA96548.1| hypothetical protein E5Q_03216 [Mixia osmundae IAM 14324]
Length = 719
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ----IKCPKCSASL--PDMN 69
SPP DL CPIC +T+CGH FC+ C+ +EL KCP C+ ++ D+
Sbjct: 194 SPP-ADLFCPICLSEPVAPRMTKCGHIFCYPCLLHYIELAESKWAKCPVCTDAIYGKDLK 252
Query: 70 SV 71
SV
Sbjct: 253 SV 254
>gi|328701611|ref|XP_003241657.1| PREDICTED: hypothetical protein LOC100573034 [Acyrthosiphon pisum]
Length = 420
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
S D+DLLC ICFE+ + + C HTFC SCI + I CP C
Sbjct: 262 SAIDSDLLCNICFEIFIKPTVLNCSHTFCESCIYIWTDRVIACPIC 307
>gi|860738|emb|CAA89995.1| NUVA [Emericella nidulans]
Length = 477
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P + L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APFETSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPTCRSSDQEL-KLRRNW 80
Query: 76 LLNELVQKHK 85
++ ELV+ K
Sbjct: 81 VVQELVEGFK 90
>gi|297702459|ref|XP_002828197.1| PREDICTED: E3 ubiquitin-protein ligase RNF125 [Pongo abelii]
Length = 196
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCP 59
A++TP R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRGDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>gi|395823037|ref|XP_003784807.1| PREDICTED: E3 ubiquitin-protein ligase RNF125 [Otolemur
garnettii]
Length = 232
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCP 59
A++TP R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRRDPELPVTSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>gi|392580418|gb|EIW73545.1| hypothetical protein TREMEDRAFT_67411 [Tremella mesenterica DSM
1558]
Length = 619
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 13 RQHSPPDNDLLCPICFELIREAHITRCGHT-FCFSCIS-KCVELQIKCPKCSASLPDMNS 70
R+ P + +L CPIC +L+ EA T C T +C CI ++ +CP C + +P ++
Sbjct: 309 REQQPTEAELTCPICKKLVWEAVRTPCCQTSYCEECIQIHLLDRDFECPSCESKIPSLSK 368
Query: 71 VFPNFLLNELVQ 82
+ P L + V+
Sbjct: 369 LEPALDLRQRVK 380
>gi|326673720|ref|XP_689262.3| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Danio rerio]
Length = 596
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+D CP+C L E T CGHTFC +CI + ++ ++CP C L + P L
Sbjct: 302 SDFECPLCIRLFYEPVTTPCGHTFCKNCIERSLDHNLRCPLCKQPLQEYFKNRKYNPTVL 361
Query: 77 LNELVQK 83
L E++ +
Sbjct: 362 LQEIMSR 368
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 20/109 (18%)
Query: 21 DLL-CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLP--DMNSVFPNFLL 77
DLL CPIC L+ E CGH+FC C+ L +CP C L D ++ N LL
Sbjct: 7 DLLECPICLFLMCEPMTMSCGHSFCRRCMG--AFLPSRCPTCKERLKQRDAKNIKNNVLL 64
Query: 78 NELVQK-------------HKIKSAQDSDGLRDFVASESQNLSLPDVNL 113
+++K K+K+++ ++ LR +A E ++ DV+L
Sbjct: 65 FSIIEKCCPEETKMKCHIQEKLKTSEFTEALR--IADEGIEMAPDDVSL 111
>gi|403262106|ref|XP_003923436.1| PREDICTED: E3 ubiquitin-protein ligase TRIM68 [Saimiri
boliviensis boliviensis]
Length = 485
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEVPGETQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR 96
N+ L +V+K ++ GL+
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLK 94
>gi|157820429|ref|NP_001099846.1| E3 ubiquitin-protein ligase TRIM31 [Rattus norvegicus]
gi|149029346|gb|EDL84606.1| tripartite motif protein 31 (predicted) [Rattus norvegicus]
Length = 507
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL--QIKCPKCSASLPDMNSVFPNFLLN 78
D+ CPIC E++++ CGH FC CI++ + I CP C S+ N+ PN LL
Sbjct: 13 DVTCPICLEILQDPVTIDCGHNFCLKCINQIGKTSENILCPLCKCSV-SKNTFRPNKLLA 71
Query: 79 ELVQK 83
L +K
Sbjct: 72 SLAEK 76
>gi|332225668|ref|XP_003262007.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RNF125 [Nomascus leucogenys]
Length = 232
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCP 59
A++TP R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRGYPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>gi|296217215|ref|XP_002754903.1| PREDICTED: E3 ubiquitin-protein ligase TRIM68 [Callithrix
jacchus]
Length = 485
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEVPGETQKWGYTCPLCRAPVQPKN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR 96
N+ L +V+K ++ GL+
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLK 94
>gi|119623666|gb|EAX03261.1| tripartite motif-containing 31, isoform CRA_e [Homo sapiens]
Length = 349
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|327352424|gb|EGE81281.1| DNA repair protein rad18 [Ajellomyces dermatitidis ATCC 18188]
Length = 422
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 6 TPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
TP L R S L C +C + IT C HTFC CI +C+ + KCP C +
Sbjct: 16 TPLSQLARVESA----LRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRTAD 71
Query: 66 PDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRK 122
++ + ++ + E+V K+ + +F + + P+ +L L +RK
Sbjct: 72 QELK-LRRDWAMQEMVDSFKLARPS----VLEFARTATVRTDEPEEDLQLPAAKKRK 123
>gi|125838418|ref|XP_001338903.1| PREDICTED: tripartite motif-containing protein 16 [Danio rerio]
Length = 553
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
CP+C +L++E CGH++C SCI+ C L+ +CP+C S + N L+
Sbjct: 15 CPVCLDLLKEPVTIPCGHSYCMSCITDCWSLKEQGPPYRCPQCRESFSQRPLLKKNTLIA 74
Query: 79 ELVQ 82
E+++
Sbjct: 75 EMME 78
>gi|326479941|gb|EGE03951.1| hypothetical protein TEQG_02985 [Trichophyton equinum CBS 127.97]
Length = 561
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
C IC E + IT C H F +SCI + +ELQ KCP C A + D
Sbjct: 319 CSICLESLDNPVITPCAHAFDYSCIEQTIELQHKCPLCRAEIKD 362
>gi|21363048|sp|Q02398.1|RAD18_EMENI RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
rad18
gi|1087096|gb|AAB35098.1| UVSH [Emericella nidulans]
gi|259483339|tpe|CBF78646.1| TPA: Postreplication repair E3 ubiquitin-protein ligase rad18 (EC
6.3.2.-) [Source:UniProtKB/Swiss-Prot;Acc:Q02398]
[Aspergillus nidulans FGSC A4]
Length = 443
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P + L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APFETSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPTCRSSDQEL-KLRRNW 80
Query: 76 LLNELVQKHK 85
++ ELV+ K
Sbjct: 81 VVQELVEGFK 90
>gi|357611198|gb|EHJ67361.1| hypothetical protein KGM_19213 [Danaus plexippus]
Length = 416
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 18 PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLL 77
P++ CP+C +R+ IT CGH FC SCI+ ++ CP + +L +FP+
Sbjct: 30 PESRYECPVCLNWLRDPVITTCGHKFCKSCITSWLQNSGHCPIDNINLSMKVDIFPDNYT 89
Query: 78 NELVQKHKI 86
+Q+ ++
Sbjct: 90 KREIQEQRM 98
>gi|195397519|ref|XP_002057376.1| GJ16377 [Drosophila virilis]
gi|194147143|gb|EDW62862.1| GJ16377 [Drosophila virilis]
Length = 273
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 24 CPICFELI--REAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
CPIC E + R+ T CGH FC+ CI V + KCP CS +L S+
Sbjct: 219 CPICLESVSGRQPATTSCGHVFCYPCILAVVRVSRKCPVCSYTLATRRSI 268
>gi|90960948|dbj|BAE92827.1| tripartite motif protein 31, isoform alpha [Pan troglodytes]
Length = 426
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 XNLVE--KIQALQASE 85
>gi|90960950|dbj|BAE92828.1| tripartite motif protein 31, isoform alpha [Pan troglodytes]
Length = 426
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 XNLVE--KIQALQASE 85
>gi|225310535|emb|CAP08973.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 408
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVFPN 74
+ C +C +L++E T CGH++C SCI C + + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVTTICGHSYCRSCIEGCWDQDVLKGVYSCPQCRETFTPRPNLRKN 70
Query: 75 FLLNELVQKHKIKSAQ 90
+L ELV+K K Q
Sbjct: 71 NMLAELVEKLKKTGLQ 86
>gi|195393454|ref|XP_002055369.1| GJ18825 [Drosophila virilis]
gi|194149879|gb|EDW65570.1| GJ18825 [Drosophila virilis]
Length = 288
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 19 DNDLLCPICFELIR--EAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
D+ CP+CFE +R E T CGH FC +CI V KCP C+ L
Sbjct: 230 DDIYRCPVCFESVRDHEPASTECGHVFCHACIVAAVRATKKCPLCNEKL 278
>gi|119623662|gb|EAX03257.1| tripartite motif-containing 31, isoform CRA_a [Homo sapiens]
Length = 267
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|426352202|ref|XP_004043605.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Gorilla gorilla
gorilla]
Length = 474
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 WNLVE--KIQALQASE 85
>gi|146083239|ref|XP_001464687.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398013392|ref|XP_003859888.1| hypothetical protein, conserved [Leishmania donovani]
gi|134068781|emb|CAM59715.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322498106|emb|CBZ33181.1| hypothetical protein, conserved [Leishmania donovani]
Length = 725
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
LK H+ + +CP+C ++ ++ CGH C +C S+C+ + +CP C+ ++P++
Sbjct: 14 LKSTHA----NCVCPVCLDVFKKPVCFPCGHILCRACASRCIAARPRCPLCNQAVPNLRH 69
Query: 71 VFP 73
P
Sbjct: 70 CSP 72
>gi|255982797|emb|CAP08948.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 551
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 19 DNDLL-CPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVF 72
D+D C +C +L++E T CGH++C SCI C + + CP+C + ++
Sbjct: 9 DHDQFGCSVCLDLLKEPVTTACGHSYCRSCIEDCWDQDVLKGVYSCPQCRETFTPRPNLR 68
Query: 73 PNFLLNELVQKHKIKSAQ 90
N +L E+V+K K Q
Sbjct: 69 KNNMLAEMVEKLKKTGLQ 86
>gi|255956283|ref|XP_002568894.1| Pc21g19030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590605|emb|CAP96800.1| Pc21g19030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 407
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APFESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELVQKHKI 86
+ ELV K+
Sbjct: 81 AVQELVDAFKL 91
>gi|212535616|ref|XP_002147964.1| SNF2 family helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210070363|gb|EEA24453.1| SNF2 family helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 939
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
C IC + + E IT C H F SCI + +E Q KCP C A L D ++
Sbjct: 681 CAICLDDLSEPVITACAHAFDKSCIEQVIERQHKCPLCRAELKDTGTL 728
>gi|149719343|ref|XP_001501928.1| PREDICTED: e3 ubiquitin-protein ligase TRIM68 [Equus caballus]
Length = 484
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPVSIDCGHSFCHSCLSGLWEVPGELQDQGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLRDFV 99
N+ L +V+K ++ GL+ V
Sbjct: 72 NWQLASVVEKVRLLELHAGVGLKGDV 97
>gi|121716908|ref|XP_001275948.1| DNA repair protein (RadR), putative [Aspergillus clavatus NRRL 1]
gi|119404105|gb|EAW14522.1| DNA repair protein (RadR), putative [Aspergillus clavatus NRRL 1]
Length = 416
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APLESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELVQ 82
+ ELV+
Sbjct: 81 AVQELVE 87
>gi|71043955|ref|NP_083170.1| LON peptidase N-terminal domain and RING finger protein 3 [Mus
musculus]
gi|81917015|sp|Q9D4H7.1|LONF3_MOUSE RecName: Full=LON peptidase N-terminal domain and RING finger
protein 3; AltName: Full=RING finger protein 127
gi|12855300|dbj|BAB30284.1| unnamed protein product [Mus musculus]
gi|111308292|gb|AAI20691.1| LON peptidase N-terminal domain and ring finger 3 [Mus musculus]
gi|111308804|gb|AAI20689.1| LON peptidase N-terminal domain and ring finger 3 [Mus musculus]
gi|148697022|gb|EDL28969.1| LON peptidase N-terminal domain and ring finger 3 [Mus musculus]
Length = 753
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
+DL C +C L E T CGHTFC C+ +C++ KCP C
Sbjct: 457 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLC 498
>gi|449527679|ref|XP_004170837.1| PREDICTED: uncharacterized protein LOC101229873 [Cucumis sativus]
Length = 231
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
P D L C IC E + E T+CGH FC +CI + Q +CP C L
Sbjct: 169 PTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKL 217
>gi|393217661|gb|EJD03150.1| hypothetical protein FOMMEDRAFT_108290 [Fomitiporia mediterranea
MF3/22]
Length = 997
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CPICFE++ + IT C H FC C+++ + +CP
Sbjct: 628 CPICFEVLNDPRITGCSHAFCLECVTEIITRDARCP 663
>gi|449432398|ref|XP_004133986.1| PREDICTED: uncharacterized protein LOC101211386 [Cucumis sativus]
Length = 231
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
P D L C IC E + E T+CGH FC +CI + Q +CP C L
Sbjct: 169 PTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKL 217
>gi|255710917|ref|XP_002551742.1| KLTH0A06556p [Lachancea thermotolerans]
gi|238933119|emb|CAR21300.1| KLTH0A06556p [Lachancea thermotolerans CBS 6340]
Length = 460
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D L C IC I+ +T CGHTFC CI + + ++KCP C A L + + + FL+N
Sbjct: 32 DTLLRCHICKGFIKTPVLTPCGHTFCSLCIREYLNRELKCPLCLAELRE-SMLRSEFLVN 90
Query: 79 ELVQKH 84
E++ +
Sbjct: 91 EIIASY 96
>gi|380493847|emb|CCF33583.1| transcription termination factor 2 [Colletotrichum higginsianum]
Length = 364
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
C IC + + IT C H FC +CISK +E Q KCP C L +
Sbjct: 125 CAICLDTLNRPVITHCKHVFCHACISKVIETQHKCPMCRNQLQE 168
>gi|149059996|gb|EDM10812.1| similar to ring finger protein 127 (predicted) [Rattus norvegicus]
Length = 632
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCS----ASLPD-------- 67
+DL C +C L E T CGHTFC C+ +C++ KCP C LP
Sbjct: 336 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVLLQCLPSRKYSKNVI 395
Query: 68 MNSVFPNFLLNELVQKHKI 86
M + FL EL ++ ++
Sbjct: 396 MEELIAKFLPEELKERRRL 414
>gi|91080239|ref|XP_972955.1| PREDICTED: similar to AGAP003004-PA [Tribolium castaneum]
gi|270006403|gb|EFA02851.1| TNF-receptor-associated factor 2 [Tribolium castaneum]
Length = 398
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-IKCPK 60
S T S+ S P++ CPIC +R+ +T CGH FC SC+ +E + CP
Sbjct: 6 SNTLAQESSINDNFSGPESRFECPICLAWLRDPVLTSCGHRFCRSCMDSWLERENPSCPI 65
Query: 61 CSASLPDMNSVFP-NFLLNELVQK 83
+ L +FP NF E+ Q+
Sbjct: 66 DNTKLEKGVDIFPDNFTRREISQQ 89
>gi|410902597|ref|XP_003964780.1| PREDICTED: zinc-binding protein A33-like [Takifugu rubripes]
Length = 459
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-CPKC 61
S P+ DL+CPIC+E+ + + C H+FC C+ +C + ++ CP C
Sbjct: 2 SLPEEDLMCPICYEIFTDPMLLPCSHSFCRGCLKRCWDTGLRECPVC 48
>gi|425777963|gb|EKV16112.1| DNA repair protein (RadR), putative [Penicillium digitatum Pd1]
gi|425780072|gb|EKV18093.1| DNA repair protein (RadR), putative [Penicillium digitatum PHI26]
Length = 408
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APFESSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSAEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELVQKHKI 86
+ ELV K+
Sbjct: 81 AVQELVDAFKL 91
>gi|343961883|dbj|BAK62529.1| tripartite motif-containing protein 31 [Pan troglodytes]
Length = 347
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 41 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 99
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 100 RNLVE--KIQALQASE 113
>gi|326665619|ref|XP_002667272.2| PREDICTED: hypothetical protein LOC100329851 [Danio rerio]
Length = 801
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
+ +CP+C +L++ CGH++C SCI+ C + CP C S ++ N
Sbjct: 11 DQFMCPVCLDLLKNPVTIPCGHSYCMSCITDCWNQEEQKRIYSCPLCKQSFTPRPALAKN 70
Query: 75 FLLNELVQK 83
+ E+++K
Sbjct: 71 VVFAEMLEK 79
>gi|410080870|ref|XP_003958015.1| hypothetical protein KAFR_0F02840 [Kazachstania africana CBS
2517]
gi|372464602|emb|CCF58880.1| hypothetical protein KAFR_0F02840 [Kazachstania africana CBS
2517]
Length = 445
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L C IC + ++ +T CGHTFC CI + + Q KCP C L + + + FL+NE+V
Sbjct: 26 LRCHICKDFLKVPVLTPCGHTFCSICIREYINRQSKCPLCLNELRE-SMLRSEFLVNEIV 84
Query: 82 Q 82
Q
Sbjct: 85 Q 85
>gi|326665627|ref|XP_700178.4| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Danio rerio]
Length = 574
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNS 70
S ++ +CP+C +L++ CGH++C SCI+ C + CP C S +
Sbjct: 7 SWAEDQFMCPVCLDLLKSPVTIPCGHSYCMSCITDCWNQEEQKRIYSCPLCKQSFTPRPA 66
Query: 71 VFPNFLLNELVQK 83
+ N + E+V+K
Sbjct: 67 LAKNVVFAEMVEK 79
>gi|327266462|ref|XP_003218024.1| PREDICTED: hypothetical protein LOC100567846 [Anolis carolinensis]
Length = 970
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSASLPDMNSVFPNFLL--- 77
CP+C + ++ CGH FC SC++KC + CP+C +P ++ PN L
Sbjct: 524 CPLCLDFFKDPVTIDCGHNFCKSCLAKCWGEPGPEASCPQCREKIP-QRTLRPNRQLANM 582
Query: 78 NELVQKHKIKSAQDSDGLRD 97
ELVQK + + + +G RD
Sbjct: 583 AELVQKLQ-EGGRKKEGRRD 601
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 18 PDNDLLCPICFELIRE-AHITRCGHTFCFSCISKCVE---LQIKCPKCSASLPDMN 69
P ++ CPIC E ++ ++ CGH FC +C+++ + CP+CS ++P N
Sbjct: 6 PISEGTCPICLEYFKDPVNLESCGHHFCKTCLTQYWRESNTESTCPQCSDTVPQSN 61
>gi|255982820|emb|CAP08960.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 556
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 19 DNDLL-CPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVF 72
D+D C +C +L++E T CGH++C SCI C + + CP+C + ++
Sbjct: 9 DHDQFGCSVCLDLLKEPVTTACGHSYCRSCIEDCWDQDVLKGVYSCPQCRETFTPRPNLR 68
Query: 73 PNFLLNELVQKHKIKSAQ 90
N +L E+V+K K Q
Sbjct: 69 KNNMLAEMVEKLKKTGLQ 86
>gi|327307894|ref|XP_003238638.1| hypothetical protein TERG_00629 [Trichophyton rubrum CBS 118892]
gi|326458894|gb|EGD84347.1| hypothetical protein TERG_00629 [Trichophyton rubrum CBS 118892]
Length = 706
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLP 66
+L C +C+ L+ + + T CGHTFC SC+++ +++ CP C +LP
Sbjct: 205 ELDCQVCYSLMTDPYTTVCGHTFCRSCVARMLDISNLCPVCRRNLP 250
>gi|431896259|gb|ELK05675.1| E3 ubiquitin-protein ligase RNF125 [Pteropus alecto]
Length = 208
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCP 59
A++TP R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRREPELPVTSFDCSVCLEVLHQPVRTRCGHIFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>gi|301783823|ref|XP_002927330.1| PREDICTED: tripartite motif-containing protein 60-like
[Ailuropoda melanoleuca]
Length = 461
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVE-LQ--IKCPKCSASLPDMN 69
CPIC E +R+ T CGH FC CI +C E LQ + CP C PD N
Sbjct: 16 CPICLEYLRDPVTTECGHNFCGFCIHQCWEDLQDILPCPVCLHHCPDRN 64
>gi|443894085|dbj|GAC71435.1| predicted E3 ubiquitin ligase [Pseudozyma antarctica T-34]
Length = 1167
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 15 HSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMN 69
HS L C +C+ L+ + T CGHTFC SC ++ ++ +CP C A +P+ +
Sbjct: 690 HSELVEVLECQLCYLLLYDPLTTPCGHTFCKSCFARSLDHGDRCPLCRADMPNFS 744
>gi|221057788|ref|XP_002261402.1| c3h4-type ring finger protein [Plasmodium knowlesi strain H]
gi|194247407|emb|CAQ40807.1| c3h4-type ring finger protein, putative [Plasmodium knowlesi strain
H]
Length = 513
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK 83
C ICF+ +R+ +T+CGH FC+ C+S ++ CP C A + N V P + + +
Sbjct: 358 CNICFDDVRDPVVTKCGHLFCWLCLSAWIKKNNDCPVCKAEVSREN-VIPLYGRGKNSTE 416
Query: 84 HKIKSAQD 91
HK + ++
Sbjct: 417 HKYSNKEE 424
>gi|425774557|gb|EKV12859.1| SNF2 family helicase, putative [Penicillium digitatum Pd1]
gi|425776416|gb|EKV14633.1| SNF2 family helicase, putative [Penicillium digitatum PHI26]
Length = 947
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
LC IC + + + IT C H++C CI + +E Q KCP C A + + +++
Sbjct: 705 LCAICLDNLEQPVITACVHSYCRGCIEQVIERQHKCPLCRADIKETDTL 753
>gi|55250122|gb|AAH85564.1| Zgc:103602 [Danio rerio]
Length = 550
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
CP+C +L++E CGH++C SCI+ C L+ +CP+C S + N L+
Sbjct: 15 CPVCLDLLKEPVTIPCGHSYCMSCITDCWSLKEQGPPYRCPQCRESFSQRPLLKKNTLIA 74
Query: 79 ELVQ 82
E+++
Sbjct: 75 EMME 78
>gi|302659405|ref|XP_003021393.1| ATP-dependent protease (CrgA), putative [Trichophyton verrucosum
HKI 0517]
gi|291185290|gb|EFE40775.1| ATP-dependent protease (CrgA), putative [Trichophyton verrucosum
HKI 0517]
Length = 707
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLP 66
+L C +C+ L+ + + T CGHTFC SC+++ +++ CP C +LP
Sbjct: 205 ELDCQVCYSLMTDPYTTVCGHTFCRSCVARMLDISNLCPVCRRNLP 250
>gi|224068921|ref|XP_002302857.1| predicted protein [Populus trichocarpa]
gi|222844583|gb|EEE82130.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
+ SR K Q P+ND +C +C E + A CGH FC C + + CP C+ S
Sbjct: 113 TNKSRRDKEQEQGPENDWVCCVCMERKKGAAFIPCGHAFCRVCSREMWVNRGSCPICNRS 172
Query: 65 LPDMNSVF 72
+ D+ +F
Sbjct: 173 ILDILDIF 180
>gi|449276529|gb|EMC85001.1| E3 ubiquitin-protein ligase TRIM50 [Columba livia]
Length = 495
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNF 75
++ LLCPIC E+ +E + +CGH++C SC+ S+ ++ + CP C S+ D ++ PN
Sbjct: 11 EDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSRELDGRFLCPVCRQSV-DCSASPPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 TLARVIE 76
>gi|320587268|gb|EFW99748.1| peroxisome biosynthesis protein, peroxin-10 [Grosmannia clavigera
kw1407]
Length = 461
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
C +C E++R+ T CGH FC+ CI + V + +CP C S
Sbjct: 409 CTLCLEVLRDPSATPCGHVFCWQCIGEWVREKPECPLCRRS 449
>gi|319803104|ref|NP_001007388.2| finTRIM family, member 72 [Danio rerio]
Length = 550
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
CP+C +L++E CGH++C SCI+ C L+ +CP+C S + N L+
Sbjct: 15 CPVCLDLLKEPVTIPCGHSYCMSCITDCWSLKEQGPPYRCPQCRESFSQRPLLKKNTLIA 74
Query: 79 ELVQ 82
E+++
Sbjct: 75 EMME 78
>gi|21554128|gb|AAM63208.1| unknown [Arabidopsis thaliana]
Length = 486
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 10 SLKRQHSPPD--NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL-- 65
S+++ H + +D C +C +L+ E T CGHTFC SC+ + ++ KCP C +
Sbjct: 180 SMRKTHGMAERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDRGNKCPLCRTVIFM 239
Query: 66 -PDMNSVFPNFLLNELVQKH------KIKSAQDS 92
P +V N LN +++K+ + KS QD+
Sbjct: 240 TPRTCAV--NVTLNNIIEKNFPEEYAERKSEQDT 271
>gi|356532219|ref|XP_003534671.1| PREDICTED: DNA repair protein RAD5-like [Glycine max]
Length = 206
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
CPIC + E TRCGH FC +CI + Q KCP C
Sbjct: 151 CPICMSPLVEEMSTRCGHIFCKNCIRAAISAQAKCPTC 188
>gi|354475734|ref|XP_003500082.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Cricetulus griseus]
Length = 538
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+DL C +C L E T CGHTFC C+ +C++ KCP C L
Sbjct: 242 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVL 287
>gi|15080562|gb|AAH12021.1| Ring finger protein 125 [Homo sapiens]
Length = 232
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 2 SATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKC 58
+ S +R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + C
Sbjct: 13 APASATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTC 72
Query: 59 PKCSASLP 66
P C A LP
Sbjct: 73 PYCRAYLP 80
>gi|281351721|gb|EFB27305.1| hypothetical protein PANDA_017091 [Ailuropoda melanoleuca]
Length = 441
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVE-LQ--IKCPKCSASLPDMN 69
CPIC E +R+ T CGH FC CI +C E LQ + CP C PD N
Sbjct: 11 CPICLEYLRDPVTTECGHNFCGFCIHQCWEDLQDILPCPVCLHHCPDRN 59
>gi|71274158|ref|NP_001025049.1| LON peptidase N-terminal domain and RING finger protein 2 [Mus
musculus]
gi|187952147|gb|AAI39128.1| LON peptidase N-terminal domain and ring finger 2 [Mus musculus]
gi|187952149|gb|AAI39131.1| LON peptidase N-terminal domain and ring finger 2 [Mus musculus]
Length = 518
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 3 ATSTPSRSLKRQHSPPD-----NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK 57
A S P R+ P+ D C +C L+ E T CGHTFC C+ +C++
Sbjct: 187 ADSPPQRNASSLEEEPEFTIDATDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPH 246
Query: 58 CPKCSASLPDMNSVFPNF----LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
CP C L ++ + NF L EL+ ++ D + D SE NL+
Sbjct: 247 CPLCKDKLSELLATR-NFNVTVLTEELIFRYLPDELSDRKRVYDEEMSELSNLT 299
>gi|47211160|emb|CAF92535.1| unnamed protein product [Tetraodon nigroviridis]
Length = 506
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCSASLPDMNSVFPNFL 76
++ LLC IC ++ T CGH FC SCI++ +L+++ CP C + P+ + N +
Sbjct: 1 EDQLLCSICLDVFTLPVTTSCGHNFCKSCITQEWDLKVQWTCPLCKKAFPERPELQVNTV 60
Query: 77 LNELVQKHK 85
++E+V ++
Sbjct: 61 ISEMVAVYR 69
>gi|332245860|ref|XP_003272070.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 [Nomascus
leucogenys]
Length = 475
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIEETSRGFFKCPLCKTSV-RKNAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 WNLVE--KIQALQASE 85
>gi|326670020|ref|XP_003199128.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1 [Danio rerio]
Length = 751
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 14/120 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD--------MNSV 71
ND C +C L + T CGHTFC +C+ +C++ +CP C SL + + V
Sbjct: 453 NDFECSLCMRLFYQPVTTPCGHTFCTNCLERCLDHNPQCPLCKESLKEYLAFRKYTVTQV 512
Query: 72 FPNFLLNELVQKH--KIK-SAQDSDGLRDFVASESQ---NLSLPDVNLMLEVLNQRKHLL 125
N + L ++H ++K A+++ L D + ++ P V L V R L+
Sbjct: 513 LDNIIKQHLPKEHSERVKLHAEETKELSDLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLM 572
>gi|156049585|ref|XP_001590759.1| hypothetical protein SS1G_08499 [Sclerotinia sclerotiorum 1980]
gi|154692898|gb|EDN92636.1| hypothetical protein SS1G_08499 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 915
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
DN C IC E + + IT C H F CI + ++LQ KCP C A L +
Sbjct: 670 DNHEECAICLEELHDPVITVCKHVFGKECIERTIDLQHKCPMCRADLAN 718
>gi|119623663|gb|EAX03258.1| tripartite motif-containing 31, isoform CRA_b [Homo sapiens]
Length = 267
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|255983021|emb|CAP08975.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 382
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVFPN 74
+ L C +C +L++E + CGH++C SCI C + + CP+C + ++ N
Sbjct: 11 DQLCCSVCLDLLKEPVVIPCGHSYCRSCIEGCWDQDVLKVVYSCPQCRETFTPRPNLRKN 70
Query: 75 FLLNELVQKHKIKSAQ 90
+L E+V+K K Q
Sbjct: 71 NMLAEMVEKLKKTGLQ 86
>gi|432880159|ref|XP_004073581.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Oryzias latipes]
Length = 568
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 24/125 (19%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+D CP+C L + T CGHTFC +CI + ++ ++CP C L +
Sbjct: 274 SDFECPLCIRLFFDPVTTPCGHTFCKNCIERSLDHNLRCPLCKQPLQEYLKNRKYNPTIV 333
Query: 68 ----MNSVFPNFLLNELVQKHKIKSAQDSDGLRD---FVASESQNLSLPDVNLMLEVLNQ 120
+N +FP+ L E Q H+ + A+ S+ +D FV + ++ P V L +
Sbjct: 334 LKDFLNQLFPS-QLAERKQVHEAEMAELSNLTKDIPIFVCT----VAYPGVACPLHIFEP 388
Query: 121 RKHLL 125
R L+
Sbjct: 389 RYRLM 393
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 21/110 (19%)
Query: 21 DLL-CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLP--DMNSVFPNFLL 77
DLL CP+C L+ E CGHTFC C+ L KCP C L D+ ++ N LL
Sbjct: 2 DLLECPLCLFLMCEPVTMSCGHTFCRRCVGG--YLPSKCPMCKERLKPNDVKAMKNNVLL 59
Query: 78 NELVQK-------------HKIKSAQDSDGLRDFVASESQNLSLPDVNLM 114
+V+K K+K+ + ++ LR + +E L+ PDV +
Sbjct: 60 ISVVEKCYPEETRVKCQIHEKLKANEFAEALR--IVNEELRLA-PDVKTL 106
>gi|255956037|ref|XP_002568771.1| Pc21g17740 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590482|emb|CAP96671.1| Pc21g17740 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 968
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS-VFPNFLLNE 79
+C IC + + + IT C H++C CI + +E Q KCP C A + + ++ V P L+E
Sbjct: 724 MCAICLDNLDQPVITACAHSYCRGCIEQVIERQHKCPLCRADINETSTLVSPAVELSE 781
>gi|126337219|ref|XP_001369239.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Monodelphis domestica]
Length = 795
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+D C +C L E T CGHTFC C+ +C++ CP C L + S L
Sbjct: 476 SDFECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHTPDCPLCKEKLSEFLASRSYKKTIL 535
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ + D + D E NL+
Sbjct: 536 TEELILRYLPEELSDRKKVYDDEMKELSNLT 566
>gi|405962026|gb|EKC27741.1| Peroxisome biogenesis factor 10 [Crassostrea gigas]
Length = 267
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
S TS+P + + + S D C +C E R T CGH FC+ CI + +++CP C
Sbjct: 188 SGTSSPQKDISTRTSNDAIDRKCCLCLEARRSPTATPCGHLFCWQCIYEWCSTKLECPIC 247
Query: 62 SASLPDMNSVF 72
+L VF
Sbjct: 248 RETLQPQKLVF 258
>gi|71003604|ref|XP_756468.1| hypothetical protein UM00321.1 [Ustilago maydis 521]
gi|46096073|gb|EAK81306.1| hypothetical protein UM00321.1 [Ustilago maydis 521]
Length = 622
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 14 QHSPPDNDLLCPICFELIREAHITRCGHT-FCFSCI-SKCVELQIKCPKCSASLPDMNSV 71
Q +P D L CP+C +L+R+A +T C T +C CI + +E + C +C + D+ +
Sbjct: 318 QSAPTDPSLACPLCSKLLRDAVVTPCCQTKYCEECIQTHLLEHEFLCAECEKRIADLEQL 377
Query: 72 FPNFLLNELVQKHKIKSAQDSD 93
P+ + V+++ ++ + S+
Sbjct: 378 QPDLETRKRVKEYVKETIEQSE 399
>gi|440803902|gb|ELR24785.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 206
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP-NFLLNE 79
D +CP+C ELI + T CGHTFC C++ + + KCP C + ++ F N L+
Sbjct: 17 DFMCPVCTELIYKPVTTPCGHTFCEVCLAMALAYKAKCPMCRETCGLSHAQFKVNVLMAA 76
Query: 80 LVQKH----KIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKH 123
++++ K AQ+ + V + L + + + + +Q +H
Sbjct: 77 IIEQSFGDLYKKRAQEMEKQALVVRQGKKKLIIGNTHETVPSTSQNRH 124
>gi|341038470|gb|EGS23462.1| putative ubiquitin fusion degradation protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 481
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
P D LLCP+C T CGHTFC CI++ +E+Q CP
Sbjct: 57 GPVDETLLCPVCRTPFHAPITTSCGHTFCADCINRALEIQPVCP 100
>gi|302894367|ref|XP_003046064.1| hypothetical protein NECHADRAFT_91099 [Nectria haematococca mpVI
77-13-4]
gi|256726991|gb|EEU40351.1| hypothetical protein NECHADRAFT_91099 [Nectria haematococca mpVI
77-13-4]
Length = 884
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
C IC++ + IT C H FC +CI + ++LQ KCP C L + + + P
Sbjct: 644 CAICYDTPTDPLITACKHVFCRACIVRAIQLQHKCPMCRNQLTEDSLLEP 693
>gi|224108153|ref|XP_002333426.1| predicted protein [Populus trichocarpa]
gi|222836565|gb|EEE74972.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
+ SR K Q P+ND +C +C E + A CGH FC C + + CP C+ S
Sbjct: 114 TNKSRRDKEQEQGPENDWVCCVCMERKKGAAFIPCGHAFCRVCSREMWVNRGSCPICNRS 173
Query: 65 LPDMNSVF 72
+ D+ +F
Sbjct: 174 ILDILDIF 181
>gi|390474127|ref|XP_003734728.1| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 2-like [Callithrix jacchus]
Length = 912
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF---- 75
D C +C L+ E T CGHTFC C+ +C++ +CP C L ++ + NF
Sbjct: 603 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHSPQCPLCKDKLSELLASR-NFNITV 661
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ ++ D + D SE NL+
Sbjct: 662 LAEELIIRYLSDELSDRKRIYDEEMSELSNLT 693
>gi|209155628|gb|ACI34046.1| Tripartite motif-containing protein 16 [Salmo salar]
Length = 551
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVFPN 74
+ C +C +L++E CGH++C SCI C + + CP+C + ++ N
Sbjct: 11 DQFFCSVCLDLLKEPVAIPCGHSYCRSCIEGCWDQDVLKGVYSCPQCRETFSPRPTLSKN 70
Query: 75 FLLNELVQKHKIKSAQ 90
+L ELV+K K Q
Sbjct: 71 NMLAELVEKLKKTGLQ 86
>gi|7020569|dbj|BAA91182.1| unnamed protein product [Homo sapiens]
Length = 232
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 2 SATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKC 58
+ S +R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + C
Sbjct: 13 APASATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTC 72
Query: 59 PKCSASLP 66
P C A LP
Sbjct: 73 PYCRAYLP 80
>gi|340521784|gb|EGR52018.1| predicted protein [Trichoderma reesei QM6a]
Length = 882
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
C IC++ IT C H FC CI++ ++LQ KCP C L + + + P
Sbjct: 645 CAICYDTPTNPVITNCQHVFCRHCITRAIQLQAKCPMCRNPLKEDDLLEP 694
>gi|297844822|ref|XP_002890292.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297336134|gb|EFH66551.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 10 SLKRQHSPPD--NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL-- 65
S+++ H + +D C +C +L+ E T CGHTFC SC+ + ++ KCP C +
Sbjct: 180 SMRKTHGKAERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDRGNKCPLCRTVIFM 239
Query: 66 -PDMNSVFPNFLLNELVQKH------KIKSAQDS 92
P +V + LN ++QK+ + KS QD+
Sbjct: 240 TPRTCAV--SVTLNNIIQKNFPEEYAERKSEQDT 271
>gi|17553622|ref|NP_499028.1| Protein NHL-1 [Caenorhabditis elegans]
gi|6226931|sp|Q03601.2|NHL1_CAEEL RecName: Full=RING finger protein nhl-1
gi|3877606|emb|CAA79562.1| Protein NHL-1 [Caenorhabditis elegans]
Length = 974
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSA--SLP--DMNSVFPN 74
L CPIC + ++ + C HTFC+ C+ C + +KCP+C A ++P + + PN
Sbjct: 41 LTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYDGVKAFQPN 100
Query: 75 FLLNELVQKH 84
+ L ++ H
Sbjct: 101 YTLTGFLEIH 110
>gi|224049868|ref|XP_002192219.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1 [Taeniopygia guttata]
Length = 824
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 17/134 (12%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+D C +C L E T CGHTFC C+ +C++ +CP C SL +
Sbjct: 527 SDFECSLCMRLFFEPVTTPCGHTFCKGCLERCLDHAPQCPLCKESLKEYLASRKYSITEL 586
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSD--GLRDFVASESQNLSLPDVNLMLEVLNQRKHLL 125
+ + +L +EL ++ +I + + ++ L V ++ P V L V R L+
Sbjct: 587 LEELIMKYLSDELFERKRIHAEETAEHSNLTKNVPMFVCTMAYPTVPCPLHVFEPRYRLM 646
Query: 126 ---EAESSVAQYKL 136
E+ Q+ +
Sbjct: 647 IRRSMETGTKQFGM 660
>gi|397310696|gb|AFO38358.1| TRIM5 alpha [Capra hircus]
Length = 509
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-------KCPKCSASLPDMNSVFP 73
++ CPIC EL+ E CGHTFC +CI+ E I CP C S N + P
Sbjct: 12 EVTCPICLELLTEPRSLGCGHTFCQACITANNEESIVGQEGKKSCPVCRVSFEPGN-LRP 70
Query: 74 NFLLNELVQK-HKIKSAQDSDGLRDFVASESQNLSL 108
N + +VQ+ ++K + + + R+ A + L L
Sbjct: 71 NRHVANIVQRLREVKVSPEVEQERNLCAHHGEKLQL 106
>gi|378725543|gb|EHY52002.1| hypothetical protein HMPREF1120_00225 [Exophiala dermatitidis
NIH/UT8656]
Length = 476
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCI------SKCVELQIKCPKCSASLPDMNSVFPNFL 76
LC IC + E I CGHT+C+SC+ S+ + + CP C A + S PN+L
Sbjct: 24 LCKICIKPFYEPFILPCGHTYCYSCLASWFGGSQSRKRKKNCPDCRAEVKVQPS--PNYL 81
Query: 77 LNELVQ 82
L +LV
Sbjct: 82 LRDLVH 87
>gi|356539611|ref|XP_003538290.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Glycine
max]
Length = 873
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLP--DMNSVF 72
C IC + +E IT+C H FC+SCI K KCP+CS S D+ SV+
Sbjct: 821 CSICQDRAKEVVITKCYHLFCYSCIQKVAGSRHRKCPQCSTSFGANDVKSVY 872
>gi|344242273|gb|EGV98376.1| hypothetical protein I79_006213 [Cricetulus griseus]
Length = 406
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD---MNSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L N +
Sbjct: 149 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVLLQCLPSRKYSKNVI 208
Query: 77 LNELVQK 83
+ EL+ K
Sbjct: 209 MEELIAK 215
>gi|431922687|gb|ELK19607.1| Peroxisome biogenesis factor 10 [Pteropus alecto]
Length = 326
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
LC +C E R A T CGH FC+ CI++ + + +CP C P V+
Sbjct: 272 LCTLCLEERRHATATPCGHLFCWECITQWCDTKTECPLCREKFPPQKLVY 321
>gi|410917704|ref|XP_003972326.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Takifugu
rubripes]
Length = 592
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL----QIKCPKCSASLPDMNSVFPN 74
++ CP+C ++++E T CGHT+C SCI+ + Q CP+C + + N
Sbjct: 10 ESQFKCPVCLDILKEPVSTPCGHTYCMSCINNYWDQAESGQFSCPQCRETFSPRPVLRRN 69
Query: 75 FLLNELVQKHKI 86
+L E+V K K+
Sbjct: 70 TVLAEVVDKIKL 81
>gi|452003286|gb|EMD95743.1| hypothetical protein COCHEDRAFT_1190940 [Cochliobolus
heterostrophus C5]
Length = 461
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L C +C E IT C HTFC CI +C+ KCP C + + PN + E+V
Sbjct: 28 LRCEVCKEFYHNPVITSCSHTFCSICIRRCIASDGKCPSCKTGC-SSDKLAPNIAVREVV 86
Query: 82 QK 83
+
Sbjct: 87 MR 88
>gi|70941612|ref|XP_741073.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519218|emb|CAH81871.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 404
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 15 HSPPDN------DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM 68
H+ DN DL C IC +L+ CGH FC C+ K E CP C +S+ D
Sbjct: 96 HNNKDNEKQISSDLECVICMKLLIMPVTIPCGHNFCRDCLEKAKEYNDTCPLCRSSMGDK 155
Query: 69 NSVFPNFLLNELVQK 83
+V N LL EL+++
Sbjct: 156 QNV--NILLAELIKE 168
>gi|403301389|ref|XP_003941373.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Saimiri boliviensis boliviensis]
Length = 707
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF---- 75
D C +C L+ E T CGHTFC C+ +C++ +CP C L ++ + NF
Sbjct: 398 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHSPQCPLCKDKLSELLASR-NFNITV 456
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ ++ D + D SE NL+
Sbjct: 457 LAEELIIRYLSDELSDRKRIYDEEMSELSNLT 488
>gi|345497763|ref|XP_001599271.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like, partial [Nasonia vitripennis]
Length = 577
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
S DL C +C L+ + T CGHT+C+ C+ +C++ CP C SL D
Sbjct: 214 SAAGGDLDCILCCRLLYKPVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLAD 265
>gi|118097440|ref|XP_414581.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2-like [Gallus gallus]
Length = 607
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+DL C +C + E T CGHTFC C+ +C++ + CP C SL + S P L
Sbjct: 304 SDLECSLCIRMFFEPVTTPCGHTFCKECLERCLDHRPNCPLCKQSLREYLKAGSYSPTVL 363
Query: 77 LNELV 81
L +++
Sbjct: 364 LQDIM 368
>gi|37595555|ref|NP_060301.2| E3 ubiquitin-protein ligase RNF125 [Homo sapiens]
gi|143811449|sp|Q96EQ8.4|RN125_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF125; AltName:
Full=RING finger protein 125; AltName: Full=T-cell RING
activation protein 1; Short=TRAC-1
gi|119621683|gb|EAX01278.1| ring finger protein 125 [Homo sapiens]
Length = 232
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 2 SATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKC 58
+ S +R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + C
Sbjct: 13 APASATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTC 72
Query: 59 PKCSASLP 66
P C A LP
Sbjct: 73 PYCRAYLP 80
>gi|392569863|gb|EIW63036.1| hypothetical protein TRAVEDRAFT_56219 [Trametes versicolor
FP-101664 SS1]
Length = 1255
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CP+CF + E IT CGH FC +CI++ + KCP
Sbjct: 855 CPVCFGELNEPRITFCGHMFCLACITEVIARDPKCP 890
>gi|327266644|ref|XP_003218114.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 464
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPKCSASLPDMNSVFPNFLLNE 79
+L CPIC E +E CGH FC SC+ +C E + CP+C + + + PN L +
Sbjct: 13 ELSCPICLEYFKEPLSLSCGHNFCQSCLDQCWEGKEASCPQCREKVQE-GDIRPNRQLAK 71
Query: 80 LVQ 82
+V+
Sbjct: 72 VVE 74
>gi|417401782|gb|JAA47759.1| Putative e3 ubiquitin-protein ligase rnf8 [Desmodus rotundus]
Length = 487
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
+N+L C IC E EA C H+FC CIS+ ++ +I+CP C D+ S P+ +L+
Sbjct: 400 ENELQCIICSEYFIEAVTLNCAHSFCSFCISEWMKRKIECPICRK---DIKSKTPSLVLD 456
Query: 79 ELVQK 83
+ K
Sbjct: 457 NCISK 461
>gi|226289244|gb|EEH44756.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Paracoccidioides brasiliensis Pb18]
Length = 394
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
STP L R S L C +C + IT C HTFC CI +C+ + KCP C +
Sbjct: 15 STPIPKLSRVESA----LRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSG 70
Query: 65 LPDMNSVFPNFLLNELVQKHKIKS------AQDSDGLRDFVASESQNLSLP 109
++ + N+ + E+V K+ A+ + RD E + +P
Sbjct: 71 DQELK-LRRNWAMQEMVDSFKLARPSVLEFARSATVRRDQGGEEEDGVEMP 120
>gi|221056194|ref|XP_002259235.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809306|emb|CAQ40008.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 627
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
S+P +++H P ++L C IC +L+ CGH FC C+ K E + CP C ++
Sbjct: 116 SSPKDESEKEHIP--SELECAICMKLLIIPVTIPCGHNFCRDCLEKAKEYKNTCPLCRSN 173
Query: 65 LPDMNSVFPNFLLNELVQK 83
+ D ++ N LL++L+++
Sbjct: 174 MGDKKNI--NILLSDLIKE 190
>gi|114672701|ref|XP_001160124.1| PREDICTED: E3 ubiquitin-protein ligase RNF125 [Pan troglodytes]
Length = 232
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 5 STPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPKC 61
S +R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP C
Sbjct: 16 SATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYC 75
Query: 62 SASLP 66
A LP
Sbjct: 76 RAYLP 80
>gi|327270702|ref|XP_003220128.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 332
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 21 DLLCPICFELIRE-AHITRCGHTFCFSCISKCVE-LQIKCPKCSASLPDMNSVFPNFLLN 78
+L CPIC E +E I CGH FC SC+ +C E + CP+C + + + PN L
Sbjct: 13 ELACPICLEYFKEPVMIISCGHHFCQSCLDQCWEGKEASCPQCREKVQE-GDIRPNRQLA 71
Query: 79 ELVQKHKIKSAQDSD 93
LV+ K +Q ++
Sbjct: 72 NLVEIAKELGSQKAE 86
>gi|268574858|ref|XP_002642408.1| C. briggsae CBR-NHL-1 protein [Caenorhabditis briggsae]
Length = 979
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSA--SLP--DMNSVFPN 74
L CPIC + ++ + C HTFC+ C+ C + +KCP+C A ++P + + PN
Sbjct: 41 LTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYDGVKAFQPN 100
Query: 75 FLLNELVQKH 84
+ L ++ H
Sbjct: 101 YTLTGFLEIH 110
>gi|326676354|ref|XP_003200554.1| PREDICTED: tripartite motif-containing protein 39-like [Danio
rerio]
Length = 518
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 1 MSATSTPSRSLKRQ--HSPPD---------NDLLCPICFELIREAHITRCGHTFCFSCIS 49
M+ +S R ++R+ PPD +L C +C E+ + T CGH FC +C++
Sbjct: 1 MAESSQKGRQIRRKSLDFPPDMSSSGGPLSEELQCSVCLEVFTDPVTTPCGHNFCKTCLN 60
Query: 50 KCVE--LQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIKS 88
KC CP C +L + N L E+ ++K KS
Sbjct: 61 KCWNDSETCSCPYCKETLNQRPDLKINTTLREISDRYKQKS 101
>gi|341877854|gb|EGT33789.1| CBN-NHL-1 protein [Caenorhabditis brenneri]
Length = 976
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSA--SLP--DMNSVFPN 74
L CPIC + ++ + C HTFC+ C+ C + +KCP+C A ++P + + PN
Sbjct: 41 LTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYDGVKAFQPN 100
Query: 75 FLLNELVQKH 84
+ L ++ H
Sbjct: 101 YTLTGFLEIH 110
>gi|302508831|ref|XP_003016376.1| ATP-dependent protease (CrgA), putative [Arthroderma benhamiae CBS
112371]
gi|291179945|gb|EFE35731.1| ATP-dependent protease (CrgA), putative [Arthroderma benhamiae CBS
112371]
Length = 707
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLP 66
+L C +C+ L+ + + T CGHTFC SC+++ +++ CP C +LP
Sbjct: 205 ELDCQVCYSLMTDPYTTVCGHTFCRSCVTQMLDISNLCPVCRRNLP 250
>gi|443896205|dbj|GAC73549.1| predicted E3 ubiquitin ligase [Pseudozyma antarctica T-34]
Length = 633
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 14 QHSPPDNDLLCPICFELIREAHITRCGHT-FCFSCI-SKCVELQIKCPKCSASLPDMNSV 71
Q P D L CP+C +L+REA +T C T +C CI + +E + C +C + D+ +
Sbjct: 316 QSPPTDTTLACPLCSKLLREAVVTPCCKTKYCEECIQTHLLEHEFTCAECDKRIADLEQL 375
Query: 72 FPN 74
P+
Sbjct: 376 KPD 378
>gi|327266564|ref|XP_003218074.1| PREDICTED: e3 ubiquitin-protein ligase TRIM11-like [Anolis
carolinensis]
Length = 693
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 20 NDLLCPICFELIRE-AHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSVFPNFLL 77
+L CPIC E +E I CGH FC SC+ +C E + CP+C + + + + PN L
Sbjct: 298 EELSCPICLEYYKEPVMIISCGHNFCQSCLDQCWEEKEASCPQCREKVQERD-IRPNRQL 356
Query: 78 NELVQ 82
LV+
Sbjct: 357 ANLVE 361
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSVFPNFLLN 78
+L CPIC E +E CGH FC SC+ +C E + CP+C + + + + PN L
Sbjct: 12 EELSCPICLEYFKEPVSLSCGHNFCQSCLDQCWEEKEASCPQCREKVQERD-IRPNRQLA 70
Query: 79 ELVQ 82
+V+
Sbjct: 71 NVVE 74
>gi|326429025|gb|EGD74595.1| hypothetical protein PTSG_05960 [Salpingoeca sp. ATCC 50818]
Length = 570
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
DN L CPIC IR+A + H FC +C+ + V +Q +CP C L + + + P +
Sbjct: 20 DNLLRCPICLLGIRDASMCPSQHIFCDACLRRSVSIQRRCPVCKDFLTE-SRIQPARFVR 78
Query: 79 ELVQKHKIKSAQDSDGLRDFVASE--SQNLS 107
+V K ++ DG + E +Q+LS
Sbjct: 79 HMVDKLEVYCDNKHDGCAETTTIERRTQHLS 109
>gi|281203538|gb|EFA77738.1| MEK1 interacting protein 1 [Polysphondylium pallidum PN500]
Length = 517
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+ CPIC+E I + T CGH +C CI+ ++ + +CP CS L
Sbjct: 464 VTCPICYEKIEQPVSTTCGHVYCSPCINAALKRKKQCPVCSTKL 507
>gi|295661727|ref|XP_002791418.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226279975|gb|EEH35541.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 430
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
STP L R S L C +C + IT C HTFC CI +C+ + KCP C +
Sbjct: 15 STPIPKLARVESA----LRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSG 70
Query: 65 LPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLP 109
++ + N+ + E+V K+ + R Q + +P
Sbjct: 71 DQELK-LRRNWAMQEMVDSFKLARPSVLEFARSATVRRDQGVEMP 114
>gi|329663542|ref|NP_001192788.1| E3 ubiquitin-protein ligase RNF125 [Bos taurus]
gi|296473894|tpg|DAA16009.1| TPA: zinc finger protein 313-like [Bos taurus]
gi|440901683|gb|ELR52579.1| E3 ubiquitin-protein ligase RNF125 [Bos grunniens mutus]
Length = 232
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCP 59
A++TP R+L+R+ P P C +C E++ TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRGDPELPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>gi|402863190|ref|XP_003895914.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Papio anubis]
Length = 488
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E + RCGH++C C+ ++ +++CP C ++ +S PN
Sbjct: 11 EDRLQCPICLEVFKEPLMLRCGHSYCKGCLVSLSCHLDAELRCPVCRQTVDGSSSPPPNV 70
Query: 76 LLNELVQ 82
L +++
Sbjct: 71 SLARVIE 77
>gi|397310690|gb|AFO38355.1| TRIM5 alpha [Capra hircus]
Length = 509
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-------KCPKCSASLPDMNSVFP 73
++ CPIC EL+ E CGHTFC +CI+ E I CP C S N + P
Sbjct: 12 EVTCPICLELLTEPRSLDCGHTFCQACITANNEESIVGQEGKKSCPVCRVSFEPGN-LRP 70
Query: 74 NFLLNELVQK-HKIKSAQDSDGLRDFVASESQNLSL 108
N + +VQ+ ++K + + + R+ A + L L
Sbjct: 71 NRHVANIVQRLREVKVSPEVEQERNLCAHHGEKLQL 106
>gi|384248823|gb|EIE22306.1| hypothetical protein COCSUDRAFT_66556 [Coccomyxa subellipsoidea
C-169]
Length = 1770
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
CPIC ++ +T CGH FC CI + V + +CP C A L
Sbjct: 1518 CPICLDVCERRTVTSCGHHFCSDCIHESVHNRAECPICRAPL 1559
>gi|409049604|gb|EKM59081.1| hypothetical protein PHACADRAFT_87866 [Phanerochaete carnosa
HHB-10118-sp]
Length = 743
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM--------NSVF 72
+L C ICF L+ + T C HTFC C+ + ++ CP C +LP N V
Sbjct: 311 ELTCEICFALLWQPVTTPCQHTFCARCLHRTMDHSSACPICRQTLPGYAYFQDHPCNKVV 370
Query: 73 PNFLLNELVQKHKIK----SAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLL 125
+ +L ++ + A++ D D ++Q LS P + ML + R L+
Sbjct: 371 LSLILKAFPTQYDERGATIEAEERDARLDTPILDAQ-LSFPGMPTMLHLFEPRFRLM 426
>gi|109066279|ref|XP_001110857.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Macaca
mulatta]
gi|355560555|gb|EHH17241.1| E3 ubiquitin-protein ligase TRIM50 [Macaca mulatta]
gi|355747585|gb|EHH52082.1| E3 ubiquitin-protein ligase TRIM50 [Macaca fascicularis]
Length = 488
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E + RCGH++C C+ ++ +++CP C ++ +S PN
Sbjct: 11 EDRLQCPICLEVFKEPLMLRCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGSSSPPPNV 70
Query: 76 LLNELVQ 82
L +++
Sbjct: 71 SLARVIE 77
>gi|406694144|gb|EKC97478.1| mRNA polyadenylation-related protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 519
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 42/144 (29%)
Query: 12 KRQHSPPDNDLLCPICFELIREAHITRCGHT-FCFSCI-SKCVELQIKCPKCSASLPDMN 69
K S D +L CP+C + +REA T C T FC CI + V+ +CP+C + + ++
Sbjct: 229 KGDESTLDAELTCPLCKKALREATRTPCCDTAFCEECIQTYLVDHDFECPQCESKITSLD 288
Query: 70 SVFPNFLLNELVQKHK-----------------------------------IKSAQDSDG 94
+ P+ L + VQ ++ I QD +G
Sbjct: 289 KLQPDQDLRDRVQAYQDGQKEGKEAEEEVKKEGEEGEGDGAQKVSSRPPECIADMQDEEG 348
Query: 95 LRDFVASESQNLSLPDVNLMLEVL 118
A+E L LPD+N M E L
Sbjct: 349 -----ATEENPLKLPDMNTMQERL 367
>gi|327292180|ref|XP_003230798.1| PREDICTED: zinc finger protein RFP-like, partial [Anolis
carolinensis]
Length = 244
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPKCSASLPDMNSVFPNFLLNE 79
+L CPIC E +E CGH FC SC+ +C E + CP+C + + + PN L +
Sbjct: 13 ELSCPICLEYFKEPLSLSCGHNFCQSCLDQCWEGKEASCPQCREKVQE-GDIRPNRQLAK 71
Query: 80 LVQ 82
+V+
Sbjct: 72 VVE 74
>gi|125604082|gb|EAZ43407.1| hypothetical protein OsJ_28012 [Oryza sativa Japonica Group]
Length = 314
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+P + CP+C + + T CGH FC CI ++ Q KCP C SL
Sbjct: 248 APKEPTFTCPVCLNKLDKPSTTNCGHIFCEKCIQAWLKAQKKCPTCRKSL 297
>gi|56605942|ref|NP_001001828.2| RING finger protein 114 [Danio rerio]
gi|50927142|gb|AAH79515.1| Ring finger protein 114 [Danio rerio]
gi|56566225|gb|AAT42018.2| ZFP313 protein [Danio rerio]
Length = 221
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+D +CP+C E+ T+CGHTFC C+ +C L+ + P C+ D+ + L
Sbjct: 17 DDDFVCPVCLEIFVRPMTTQCGHTFCNDCLQEC--LRPQSPVCAVCRTDLRKWAKDDHLQ 74
Query: 79 ELVQK 83
+L+++
Sbjct: 75 DLMKR 79
>gi|453082260|gb|EMF10308.1| hypothetical protein SEPMUDRAFT_12689, partial [Mycosphaerella
populorum SO2202]
Length = 160
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
+ C +C+ + E + CGHT+C+SC+++ + CP C A + + + P FL+ E+V
Sbjct: 24 ITCKMCYRFLYEPYGLSCGHTYCYSCLAQWMCNSKTCPDCRAKVKEQPT--PTFLVREMV 81
Query: 82 QKHKIKSAQDSDG 94
+ K DG
Sbjct: 82 RVFVAKDELLPDG 94
>gi|410928474|ref|XP_003977625.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Takifugu rubripes]
Length = 736
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
ND C +C L E T CGHTFC +C+ +C++ CP C SL
Sbjct: 438 NDFECALCMRLFYEPVTTPCGHTFCKTCLERCLDHTPHCPLCKESL 483
>gi|397310694|gb|AFO38357.1| TRIM5 alpha [Capra hircus]
Length = 509
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-------KCPKCSASLPDMNSVFP 73
++ CPIC EL+ E CGHTFC +CI+ E I CP C S N + P
Sbjct: 12 EVTCPICLELLTEPRSLDCGHTFCQACITANNEESIVGQEGKKSCPVCRVSFEPGN-LRP 70
Query: 74 NFLLNELVQK-HKIKSAQDSDGLRDFVASESQNLSL 108
N + +VQ+ ++K + + + R+ A + L L
Sbjct: 71 NRHVANIVQRLREVKVSPEVEQERNLCAHHGEKLQL 106
>gi|298712291|emb|CBJ26742.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1307
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCIS----KCVELQIKCPKCSAS--LPDMN 69
+P D C +C E++ TRCGHTFC +CIS K + + CP+C + L D+
Sbjct: 980 TPATLDAFCSMCNEILEAPVRTRCGHTFCQACISSVLTKSKDDEGPCPRCKTAVRLTDLT 1039
Query: 70 SV 71
SV
Sbjct: 1040 SV 1041
>gi|328697154|ref|XP_003240251.1| PREDICTED: e3 ubiquitin-protein ligase RNF8-like isoform 2
[Acyrthosiphon pisum]
Length = 326
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
DNDL C +CFE+ + + C HTFC SCI + KCP C
Sbjct: 129 DNDLQCNVCFEIFIKPTVLNCSHTFCESCIHVWTKRNKKCPIC 171
>gi|410972790|ref|XP_003992839.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM68
[Felis catus]
Length = 484
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-------IKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC C+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPVSIDCGHSFCHGCLSGLWEVPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSL 108
N+ L +V+K ++ GL+ V + L +
Sbjct: 72 NWQLANVVEKVRLLGLHPGMGLKGDVCELKEQLKM 106
>gi|363733701|ref|XP_420695.3| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 1 [Gallus gallus]
Length = 721
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+D C +C L E T CGHTFC C+ +C++ +CP C SL +
Sbjct: 423 SDFECSLCMRLFFEPVTTPCGHTFCKGCLERCLDHAPQCPLCKESLKEYLASRKYSITEL 482
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSD 93
+ + +L +EL ++ +I + + ++
Sbjct: 483 LEELIMKYLSDELYERKRIHAEETAE 508
>gi|118778018|ref|XP_564794.2| AGAP007458-PA [Anopheles gambiae str. PEST]
gi|116132180|gb|EAL41789.2| AGAP007458-PA [Anopheles gambiae str. PEST]
Length = 454
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 17 PPDN-----DLLCPICFELIREAHI--TRCGHTFCFSCISKCVELQIKCPKCSASLPDMN 69
P DN D++CPIC+E + + + T CGH FC CI + +L +CP C L +
Sbjct: 385 PNDNPSTGKDIICPICYESLADRPVLSTICGHLFCADCIKRAQQLTKQCPMCKRKLWKAS 444
Query: 70 SVFPNFL 76
+ P +
Sbjct: 445 QMHPIYF 451
>gi|403265121|ref|XP_003924801.1| PREDICTED: E3 ubiquitin-protein ligase RNF125 [Saimiri
boliviensis boliviensis]
Length = 232
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCP 59
A++TP R+L+R+ P P C +C E++ TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRGDPELPVTSFDCSVCLEVLHRPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>gi|270006601|gb|EFA03049.1| hypothetical protein TcasGA2_TC010896 [Tribolium castaneum]
Length = 282
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELI--REAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
P +++ SP CPIC E + R A +T CGH FC CI++ + KCP C +
Sbjct: 212 PEPEVQKVESPKVTVGSCPICLEALSERPAAVTVCGHIFCKECITQTAKAMKKCPTCRKA 271
Query: 65 L 65
+
Sbjct: 272 I 272
>gi|325182454|emb|CCA16906.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 423
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 19 DNDLLCPICFELIREAHIT-RCGHTFCFSCISKCVELQIK-CPKCSASLPDMNSVFPNFL 76
+++L CPIC LI + + C H FC CI KC+ L IK CP C +P ++ +
Sbjct: 78 NSNLTCPICLGLINQTMVVMECLHRFCGECIQKCLRLAIKECPSCRIHIPSKRALRRDLN 137
Query: 77 LNELV 81
+ L+
Sbjct: 138 FDALI 142
>gi|293342466|ref|XP_001066614.2| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 1 [Rattus norvegicus]
Length = 854
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+D C +C L E T CGH+FC +C+ +C++ CP C SL +
Sbjct: 556 SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQL 615
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSD 93
+ + +L +EL ++ KI + ++
Sbjct: 616 LEDLIVKYLPDELSERKKIYDEETAE 641
>gi|354486089|ref|XP_003505214.1| PREDICTED: tripartite motif-containing protein 35-like [Cricetulus
griseus]
Length = 771
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCSA-SLPDMNSVFPNFLL 77
+LLC +C++ +A RCGH FC C++ C E+Q CP C ++P + N L
Sbjct: 288 ELLCAVCYDPFHDAVTLRCGHNFCRRCVTSCWEVQTTPSCPVCKERAVP--GELRTNHTL 345
Query: 78 NELVQ 82
N LV+
Sbjct: 346 NNLVE 350
>gi|328697152|ref|XP_001946078.2| PREDICTED: e3 ubiquitin-protein ligase RNF8-like isoform 3
[Acyrthosiphon pisum]
Length = 378
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
DNDL C +CFE+ + + C HTFC SCI + KCP C
Sbjct: 181 DNDLQCNVCFEIFIKPTVLNCSHTFCESCIHVWTKRNKKCPIC 223
>gi|47217298|emb|CAG12506.1| unnamed protein product [Tetraodon nigroviridis]
Length = 637
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL----QIKCPKCSASLPDMNSV 71
S ++ CP+C ++++E T CGHT+C SC++ + Q+ CP+C +
Sbjct: 7 SVTESQFRCPVCLDVLKEPVSTPCGHTYCMSCLNNYWDQAEPGQVSCPQCREIFSPRPVL 66
Query: 72 FPNFLLNELVQKHKI 86
N +L E+V K ++
Sbjct: 67 RRNTVLAEVVDKLRL 81
>gi|390342074|ref|XP_781711.3| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Strongylocentrotus purpuratus]
Length = 465
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
D C +C L + T CGHTFC C+ +C++ CP C SL ++++
Sbjct: 247 DFECSLCLRLFYQPTTTPCGHTFCRGCLDRCLDYSQACPLCKQSLTEVSA 296
>gi|388856291|emb|CCF50100.1| uncharacterized protein [Ustilago hordei]
Length = 1174
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF----PNFLL 77
L C +C+ L+ + T CGHTFC SC ++ ++ +CP C A +P+ S F PN L
Sbjct: 688 LECQLCYLLLYDPLTTPCGHTFCKSCFARSLDHADRCPLCRADMPNF-SFFQDHRPNTAL 746
Query: 78 NELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+++ + D DG+ E+++++
Sbjct: 747 LKILTS-DTATFSDEDGMHSDSTQEAKHVA 775
>gi|357488403|ref|XP_003614489.1| RING finger protein [Medicago truncatula]
gi|355515824|gb|AES97447.1| RING finger protein [Medicago truncatula]
Length = 164
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
CPIC E T+CGH FC +CI ++ Q KCP C + + + +L
Sbjct: 108 CPICMGPFVEEMTTKCGHIFCKTCIKDAIKAQAKCPTCRKKITSVRQLIRVYL 160
>gi|330930180|ref|XP_003302926.1| hypothetical protein PTT_14923 [Pyrenophora teres f. teres 0-1]
gi|311321393|gb|EFQ88962.1| hypothetical protein PTT_14923 [Pyrenophora teres f. teres 0-1]
Length = 467
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L C IC E IT C HTFC CI +C+ KCP C ++ + + PN + E+V
Sbjct: 28 LRCEICKEFYNNPVITSCHHTFCSICIRRCIATDGKCPSC-MTVCSSDKLAPNIAIREVV 86
Query: 82 QK 83
+
Sbjct: 87 TR 88
>gi|307200358|gb|EFN80610.1| RING finger protein nhl-1 [Harpegnathos saltator]
Length = 605
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 22/87 (25%)
Query: 1 MSATSTPSRS-----------LKRQHSP-----PDNDLLCPICFELIREAHITRCGHTFC 44
+SA+S P R+ + RQH +N L CPIC + + IT C HTFC
Sbjct: 33 ISASSAPERTTDPQILSSRRQIMRQHKQASGGVSENALQCPICKDRFKSPKITPCQHTFC 92
Query: 45 FSCISKCVELQIK------CPKCSASL 65
C+ V K CP C AS
Sbjct: 93 LQCLKNQVATSNKRDGCFTCPVCDASF 119
>gi|281365152|ref|NP_001163003.1| elfless, isoform B [Drosophila melanogaster]
gi|281365154|ref|NP_609860.2| elfless, isoform C [Drosophila melanogaster]
gi|224967162|gb|ACN71216.1| MIP08280p [Drosophila melanogaster]
gi|272407086|gb|ACZ94289.1| elfless, isoform B [Drosophila melanogaster]
gi|272407087|gb|AAF53642.2| elfless, isoform C [Drosophila melanogaster]
Length = 229
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 24 CPICFELIREA--HITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
CP+C E +RE T CGH FC +CI + V+ CP C P+ + +F
Sbjct: 178 CPVCLEDVREKLPVSTNCGHVFCKACIKRAVDTGRVCPLCGVDEPEFHRIF 228
>gi|242787204|ref|XP_002480957.1| ATP-dependent protease (CrgA), putative [Talaromyces stipitatus
ATCC 10500]
gi|218721104|gb|EED20523.1| ATP-dependent protease (CrgA), putative [Talaromyces stipitatus
ATCC 10500]
Length = 630
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 26/123 (21%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS---------------L 65
+L C +C+ LI + I+ CGH+FC+ C+++ + CP C L
Sbjct: 288 ELDCQVCYGLIIDPCISSCGHSFCYECVNRIRDNSNLCPLCRKKMYLSFREGSNPVHNVL 347
Query: 66 PD-MNSVFPNFLLNELVQKHKI--KSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRK 122
D +NS+FP +E+ + +I A D D L FV + L+ P + + L + R
Sbjct: 348 RDLLNSLFP----DEISSRREIIEDGAYDEDELPLFVCT----LAFPSMPIYLHIFEPRY 399
Query: 123 HLL 125
L+
Sbjct: 400 RLM 402
>gi|354477533|ref|XP_003500974.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Cricetulus
griseus]
Length = 484
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIKCPKCSASLPDMNSVFPNFL 76
+ L CPIC E+ +E + +CGH++C C +S+ ++ +++CP C S+ D +S PN
Sbjct: 12 DQLQCPICLEVFKEPLMLQCGHSYCKGCLDSLSQHLDSELRCPVCRQSV-DCSSSLPNVS 70
Query: 77 LNELV 81
L ++
Sbjct: 71 LARVI 75
>gi|403223896|dbj|BAM42026.1| uncharacterized protein TOT_040000402 [Theileria orientalis
strain Shintoku]
Length = 406
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK 83
CPIC L+ + T CGH FC CI K + + CP C L N PN LL +++ +
Sbjct: 9 CPICLNLLFKPVTTSCGHNFCKQCIDKTLLVTQNCPICKLQL--TNDYSPNLLLVQIINE 66
Query: 84 H 84
Sbjct: 67 R 67
>gi|350631887|gb|EHA20256.1| hypothetical protein ASPNIDRAFT_124001 [Aspergillus niger ATCC
1015]
Length = 349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APLESALRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSSDQEL-KLRRNW 80
Query: 76 LLNELVQ 82
+ ELV+
Sbjct: 81 AVQELVE 87
>gi|326667423|ref|XP_691169.5| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing
protein 16 [Danio rerio]
Length = 548
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
++ CP+C +L++ CGH++C SCI+ C + + CP+C + ++ N
Sbjct: 9 DEFTCPVCLDLLKHPAAIPCGHSYCKSCITDCWDQEEEKGVYSCPQCRQTFSLRPALAKN 68
Query: 75 FLLNELVQKHK 85
+L E+V+K K
Sbjct: 69 TILAEVVEKLK 79
>gi|449267125|gb|EMC78091.1| LON peptidase N-terminal domain and RING finger protein 3, partial
[Columba livia]
Length = 576
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 14/120 (11%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+DL C +C + E T CGHTFC C+ +C++ + CP C SL + S P L
Sbjct: 281 SDLECSLCIRMFFEPVTTPCGHTFCKECLERCLDHRPNCPLCKQSLREYLKDGSYSPTVL 340
Query: 77 LN---------ELVQKHKIKSAQDSD--GLRDFVASESQNLSLPDVNLMLEVLNQRKHLL 125
L +L Q+ + A+ ++ L + + +S P + L V R L+
Sbjct: 341 LQDIMLATFPAQLAQRRDLHQAEMAELSNLTNNIPIFVCTMSFPGIACPLHVFEPRYRLM 400
>gi|358374384|dbj|GAA90976.1| DNA repair protein [Aspergillus kawachii IFO 4308]
Length = 388
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APLESALRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELVQ 82
+ ELV+
Sbjct: 81 AVQELVE 87
>gi|195379050|ref|XP_002048294.1| GJ11426 [Drosophila virilis]
gi|194155452|gb|EDW70636.1| GJ11426 [Drosophila virilis]
Length = 1072
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIKCPKC 61
PS +L + P LLCP+C +++R T CGHTFC C I++C +K P+
Sbjct: 191 GVPSPTLSEDYDP----LLCPLCADMLRAPVTTNCGHTFCGQCCEAITQCNICHVKFPRS 246
Query: 62 SASLP 66
+ LP
Sbjct: 247 ADRLP 251
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMN 69
+D C +C + + +T CGHT+C C+ +C++ CP C + L ++N
Sbjct: 714 SDFDCVLCCRTLWKPVVTPCGHTYCLVCLDRCMDYNSSCPLCMSPLVELN 763
>gi|47205832|emb|CAF91974.1| unnamed protein product [Tetraodon nigroviridis]
Length = 410
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
ND C +C L E T CGHTFC +C+ +C++ CP C SL L
Sbjct: 170 NDFECALCMRLFYEPVSTPCGHTFCKNCLERCMDHTPHCPLCKESLKQYLACRKYMVTTL 229
Query: 77 LNELVQKHK 85
L+ L++++K
Sbjct: 230 LDTLIKQNK 238
>gi|390342076|ref|XP_001180621.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Strongylocentrotus purpuratus]
Length = 732
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 30/142 (21%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------- 67
D C +C L + T CGHTFC C+ +C++ CP C SL +
Sbjct: 432 DFECSLCLRLFYQPTTTPCGHTFCRGCLDRCLDYSQACPLCKQSLTEYQASNREKKVTYT 491
Query: 68 ----MNSVFP-NFLLNELVQKHKIKSA-----QDSDGLRDFVASESQNLSLPDVNLMLEV 117
M + P ++ +L+ + +++ QD + FV + L+LP + L V
Sbjct: 492 LLDLMETYLPSDYTERQLIHRKELEQVASHAFQDGGTIPVFVCT----LALPTIPCPLHV 547
Query: 118 LNQRKHLL---EAESSVAQYKL 136
R L+ ES Q+ +
Sbjct: 548 FEPRYRLMIRQAMESGARQFGM 569
>gi|335291247|ref|XP_003127936.2| PREDICTED: E3 ubiquitin-protein ligase RNF125-like [Sus scrofa]
Length = 232
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCP 59
A++TP R+L+R+ P P C +C E++ TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRGDPALPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>gi|242035411|ref|XP_002465100.1| hypothetical protein SORBIDRAFT_01g032050 [Sorghum bicolor]
gi|241918954|gb|EER92098.1| hypothetical protein SORBIDRAFT_01g032050 [Sorghum bicolor]
Length = 426
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP-NFLLN 78
+D C +CF+L+ E T CGH+FC SC+ + ++ KCP C L +P + L+
Sbjct: 188 DDFECTLCFKLLYEPVTTPCGHSFCRSCLHQSMDHGNKCPMCRTVLFIGPRTYPLSVTLS 247
Query: 79 ELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLM 114
++Q++ + + SE + ++ V+LM
Sbjct: 248 NIIQRNFPQEYAER-------RSEHETMTYAGVDLM 276
>gi|390342591|ref|XP_003725692.1| PREDICTED: uncharacterized protein LOC100893998
[Strongylocentrotus purpuratus]
Length = 365
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE--LQIKCPKCSASLPDMNSVFP 73
+ P+ +L+C IC ++R+A +TRCGH FC +C+ + L CP+C + V P
Sbjct: 10 TTPNPNLICGICACVLRDAVLTRCGHAFCHTCLDTWLARPLAGTCPQCRTCISKF-QVSP 68
Query: 74 NFLLNELV 81
+ + E++
Sbjct: 69 VWAIREMI 76
>gi|357121347|ref|XP_003562382.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Brachypodium distachyon]
Length = 480
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP-NFLLN 78
+D C +CF+L+ E T CGH+FC SC+ + ++ KCP C L +P + L+
Sbjct: 189 DDFECTLCFKLLFEPVTTPCGHSFCRSCLHQSMDHGNKCPMCRTVLFIGPRTYPISVTLS 248
Query: 79 ELVQKH 84
++QK+
Sbjct: 249 NIIQKN 254
>gi|392354018|ref|XP_224907.6| PREDICTED: LOW QUALITY PROTEIN: LON peptidase N-terminal domain and
RING finger protein 1 [Rattus norvegicus]
Length = 853
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------------ 67
+D C +C L E T CGH+FC +C+ +C++ CP C SL +
Sbjct: 555 SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQL 614
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSD 93
+ + +L +EL ++ KI + ++
Sbjct: 615 LEDLIVKYLPDELSERKKIYDEETAE 640
>gi|260807305|ref|XP_002598449.1| hypothetical protein BRAFLDRAFT_83265 [Branchiostoma floridae]
gi|229283722|gb|EEN54461.1| hypothetical protein BRAFLDRAFT_83265 [Branchiostoma floridae]
Length = 974
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKC--SASLPD--MNSVFPNF 75
L CP+C R+A I C HTFC C+ + Q ++CP C SLPD ++ + NF
Sbjct: 15 LTCPVCMLHFRDARILPCLHTFCKQCLQEWASKQDPLECPTCRTQVSLPDQGVDGLKTNF 74
Query: 76 LLNELVQKHKIK 87
+N L+ +K
Sbjct: 75 YVNNLLDFAAVK 86
>gi|392576038|gb|EIW69170.1| hypothetical protein TREMEDRAFT_69003 [Tremella mesenterica DSM
1558]
Length = 350
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D L C IC EL CGH+FC CI +E+ KCP C+ S + S+ N L
Sbjct: 29 DRSLYCQICKELFSGPVSIPCGHSFCSRCIRGSLEVMKKCPSCNESASE-GSIRRNRALE 87
Query: 79 ELV 81
E+V
Sbjct: 88 EIV 90
>gi|330803062|ref|XP_003289529.1| hypothetical protein DICPUDRAFT_80290 [Dictyostelium purpureum]
gi|325080389|gb|EGC33947.1| hypothetical protein DICPUDRAFT_80290 [Dictyostelium purpureum]
Length = 673
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 18 PDNDLLCPICFELIREAHITR--CGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
P +L CPICFE + +T CGH FC CI K E + CP C+ L NS+ P F
Sbjct: 363 PTINLECPICFEEMGANGMTSTICGHAFCTKCIIKSFERKKSCPMCNKKL-RKNSLHPLF 421
Query: 76 L 76
L
Sbjct: 422 L 422
>gi|291239957|ref|XP_002739888.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 734
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 8 SRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ----IKCPKCSA 63
S LK + DN L+C +C E R A I C H+FC CI K ++ I CP C
Sbjct: 3 SVELKIRKEIDDNFLVCTVCSERYRNAKILPCLHSFCEHCIDKLLQKSGGKGIPCPVCRR 62
Query: 64 --SLPD-MNSVFPNFLLNELV 81
LP+ +SV PN +NELV
Sbjct: 63 VHDLPEGASSVQPNVFVNELV 83
>gi|195179161|ref|XP_002029089.1| GL18606 [Drosophila persimilis]
gi|195179163|ref|XP_002029090.1| GL18595 [Drosophila persimilis]
gi|195186034|ref|XP_002029285.1| GL23847 [Drosophila persimilis]
gi|198477350|ref|XP_002136654.1| GA27903 [Drosophila pseudoobscura pseudoobscura]
gi|198477352|ref|XP_002136655.1| GA27902 [Drosophila pseudoobscura pseudoobscura]
gi|198477354|ref|XP_002136656.1| GA27901 [Drosophila pseudoobscura pseudoobscura]
gi|194107804|gb|EDW29847.1| GL18606 [Drosophila persimilis]
gi|194107805|gb|EDW29848.1| GL18595 [Drosophila persimilis]
gi|194115771|gb|EDW37814.1| GL23847 [Drosophila persimilis]
gi|198142949|gb|EDY71661.1| GA27903 [Drosophila pseudoobscura pseudoobscura]
gi|198142950|gb|EDY71662.1| GA27902 [Drosophila pseudoobscura pseudoobscura]
gi|198142951|gb|EDY71663.1| GA27901 [Drosophila pseudoobscura pseudoobscura]
Length = 85
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 20 NDLLCPICFELI--REAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
N +LCPIC+E + R + T CGH FCF C+ CV++ CP C SL
Sbjct: 28 NAILCPICYEHLNNRCSVATICGHLFCFKCLRNCVKINSACPLCRKSL 75
>gi|401409546|ref|XP_003884221.1| hypothetical protein NCLIV_046220 [Neospora caninum Liverpool]
gi|325118639|emb|CBZ54190.1| hypothetical protein NCLIV_046220 [Neospora caninum Liverpool]
Length = 1330
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 3 ATSTPSR----SLKRQHSPPDN----DLLCPICFELIREAHITR-CGHTFCFSCISKCVE 53
AT+ P R L RQ S ++ DL CPIC + + + + C H FC CI KCV
Sbjct: 682 ATAEPRRIADARLSRQTSLGESELRCDLSCPICMGIFQNVVVVKDCLHRFCADCIEKCVR 741
Query: 54 LQIK-CPKCSASLPDMNSVFPNFLLNELVQK 83
++ CP+C + ++ P+ ++ K
Sbjct: 742 TGLRECPQCRIHVASRRALRPDPTFERILNK 772
>gi|145483781|ref|XP_001427913.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394996|emb|CAK60515.1| unnamed protein product [Paramecium tetraurelia]
Length = 258
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
N+ +C ICF++ + T CGH FC CI+K V+ + CP C D
Sbjct: 13 NEFICSICFQIFTKPIKTTCGHNFCIKCITKWVQKKKHCPCCRKWQSD 60
>gi|258596895|ref|XP_001349606.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254688468|gb|AAC71877.3| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 568
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 23 LCPICFELIRE-AHITRCGHTFCFSCISKCVELQI--KCPKCSASLP-DMNSVFPNFLLN 78
+CPIC LI E + C H+FC+ C++ ++ CP C + D NS + +LN
Sbjct: 213 ICPICLSLIHEPVTLNSCFHSFCWKCLATAIQKYSIDNCPSCRTKIVYDKNSFKIDGILN 272
Query: 79 ELVQKHKIKSAQDSDGLRDF 98
+ ++KH + S+ D + R F
Sbjct: 273 QFLEKHFL-SSHDKEKNRPF 291
>gi|449492006|ref|XP_004175515.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing
protein 7-like [Taeniopygia guttata]
Length = 514
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQ 82
C +C EL RE +T CGH+FC C+ CP+C A +P SV PN L ++ +
Sbjct: 18 CSVCLELFREPVLTACGHSFCQHCLVGSA----ACPQCRAPVPP-GSVRPNRSLGDVAE 71
>gi|348690086|gb|EGZ29900.1| hypothetical protein PHYSODRAFT_474309 [Phytophthora sojae]
Length = 472
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 9 RSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM 68
R+ K++ + ++CP+C E + C HTFC CIS + CP+C D+
Sbjct: 263 RAQKQEKEERERLMMCPVCLEYFHGSATLPCSHTFCGYCISNWFRNSLSCPECR----DV 318
Query: 69 NSVFP--NFLLNELVQK 83
P N L+ELV++
Sbjct: 319 VKTVPVRNRALDELVER 335
>gi|308501735|ref|XP_003113052.1| hypothetical protein CRE_25604 [Caenorhabditis remanei]
gi|308265353|gb|EFP09306.1| hypothetical protein CRE_25604 [Caenorhabditis remanei]
Length = 338
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
++D+ C IC++LI + RC H+FC CI +C+ L +CP C
Sbjct: 97 EDDVQCTICYDLIVDPRTLRCQHSFCKKCIDQCLPLTRRCPSC 139
>gi|223648604|gb|ACN11060.1| Tripartite motif-containing protein 25 [Salmo salar]
Length = 450
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISK----CVELQIKCPKCSASLPDMNSVFPNF 75
++L CP+C +L ++ H+ CGH FC C+ + + +CP+C S ++ NF
Sbjct: 13 DELTCPVCLDLFQDPHLLPCGHNFCLLCVRRLKRQAERGRFRCPECRESHRCSAALQKNF 72
Query: 76 LLNELVQKHKIKS------AQDSDGLRDFVA 100
L + ++++ +Q DG R A
Sbjct: 73 KLANIADDYRLRGQAALSRSQQPDGGRPATA 103
>gi|115438138|ref|XP_001217989.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188804|gb|EAU30504.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 948
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
+N +C IC + + + IT C H F +CI + +E Q +CP C A + D +++
Sbjct: 697 ENQEMCAICLDTLEQPVITACAHAFDRNCIEQVIERQHRCPLCRADIADPSTL 749
>gi|195145605|ref|XP_002013782.1| GL24328 [Drosophila persimilis]
gi|194102725|gb|EDW24768.1| GL24328 [Drosophila persimilis]
Length = 317
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIR--EAHITRCGHTFCFSCISKCVELQIKCP 59
S S P R Q+ CP+C + +R E T+CGH FC CI + KCP
Sbjct: 242 SGVSPPKRKRNDQNQSSGEGYKCPVCLDCVRHREPSSTKCGHVFCRQCIETSIRATHKCP 301
Query: 60 KCSASL 65
C+ L
Sbjct: 302 MCNKKL 307
>gi|67539582|ref|XP_663565.1| hypothetical protein AN5961.2 [Aspergillus nidulans FGSC A4]
gi|40738634|gb|EAA57824.1| hypothetical protein AN5961.2 [Aspergillus nidulans FGSC A4]
gi|259479863|tpe|CBF70476.1| TPA: ATP-dependent protease (CrgA), putative (AFU_orthologue;
AFUA_2G10470) [Aspergillus nidulans FGSC A4]
Length = 623
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 8 SRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
+R+L + + N+L C +C+ LI + T CGHTFC C++ + CP C L
Sbjct: 188 TRTLTKLRATVRNELDCQVCYSLILDPLTTPCGHTFCRRCVAMALSHSNLCPICRRKLNM 247
Query: 68 MNSV 71
+SV
Sbjct: 248 PSSV 251
>gi|347838084|emb|CCD52656.1| similar to SNF2 family domain-containing protein [Botryotinia
fuckeliana]
Length = 921
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
DN C IC E + IT C H F CI + +ELQ KCP C A L +
Sbjct: 676 DNHEECSICLEELHNPVITTCKHVFGQECIERTIELQQKCPMCRAHLGN 724
>gi|357622048|gb|EHJ73668.1| hypothetical protein KGM_01877 [Danaus plexippus]
Length = 144
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 24 CPICFELIREAHI--TRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
CPIC+E + + + T+CGH +C CI + ++ + KCP C +SL + P +L
Sbjct: 87 CPICWEALGKNPLASTKCGHVYCMKCIERSLQSEKKCPTCRSSLKGKAAYHPLYL 141
>gi|242055393|ref|XP_002456842.1| hypothetical protein SORBIDRAFT_03g043910 [Sorghum bicolor]
gi|241928817|gb|EES01962.1| hypothetical protein SORBIDRAFT_03g043910 [Sorghum bicolor]
Length = 242
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
P + CPIC + EA T CGH FC CI ++ Q KCP C
Sbjct: 180 PKEPKFSCPICMNELTEAASTVCGHIFCQKCIKAAIQAQKKCPTC 224
>gi|449474750|ref|XP_004175905.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Taeniopygia
guttata]
Length = 243
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFL 76
+L CPIC E+ +E C H+FC C+ + + Q +CP C + + ++ PNF
Sbjct: 12 EELTCPICLEIYKEPVAVGCSHSFCRDCVKQALRAQQSPARCPLCHSPVGELR---PNFH 68
Query: 77 LNELVQKHKIKSAQDSDGLRD 97
L +VQ+ AQ + +D
Sbjct: 69 LRSIVQRFMEAPAQQEEEKQD 89
>gi|367004527|ref|XP_003686996.1| hypothetical protein TPHA_0I00560 [Tetrapisispora phaffii CBS 4417]
gi|357525299|emb|CCE64562.1| hypothetical protein TPHA_0I00560 [Tetrapisispora phaffii CBS 4417]
Length = 394
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCV----ELQIKCPKCSASL---PDMNSVFPN 74
L+C IC + + +T CGH +C+ C+ ++ CP+C +S+ P++NSV
Sbjct: 28 LMCSICQDYMFVPMMTACGHNYCYGCLKSWFTSNETTELSCPQCRSSVGSEPNLNSVLQQ 87
Query: 75 FLLNELVQKHKIKSAQDSDGLRDF 98
+N LV+ K ++ D G +D+
Sbjct: 88 G-MNCLVEVMKQETGDDDSGEKDY 110
>gi|348676854|gb|EGZ16671.1| hypothetical protein PHYSODRAFT_345983 [Phytophthora sojae]
Length = 407
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 21 DLLCPICFELIREAHIT-RCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSVFPNFLLN 78
DL CPIC +I+E + C H FC CIS + + + +CP C +P S+ P+ +
Sbjct: 79 DLTCPICLGIIKETMVVMECLHRFCGDCISTAIRQSKRECPSCRIHIPSKRSLRPDPNFD 138
Query: 79 ELVQK 83
L+ K
Sbjct: 139 ALISK 143
>gi|449283611|gb|EMC90216.1| E3 ubiquitin-protein ligase Topor [Columba livia]
Length = 504
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 3 ATSTPSRSLKR--QHSPPD--NDLLCPICFELIR-EAHITRCGHTFCFSCISKCVELQIK 57
TS+P+ S + Q +P D ++L+CPIC + I +A ++ CGH FC++CI + +
Sbjct: 83 GTSSPAASTSQEPQATPLDASDNLMCPICQDSIHDQASVSWCGHLFCYACILEWSRRRAV 142
Query: 58 CPKC 61
CP C
Sbjct: 143 CPIC 146
>gi|327265037|ref|XP_003217315.1| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Anolis
carolinensis]
Length = 559
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI------KCPKCSASLPDMNSVFP 73
++++CPIC E+ + T CGH FC C+ + Q+ CP+C +
Sbjct: 11 DNIMCPICLEVFKNPVTTACGHNFCIDCLQDYWDHQVLIGECPYCPQCREPFSSRPQLRK 70
Query: 74 NFLLNELVQKHKIKSAQDS 92
N L E+ K + AQ+S
Sbjct: 71 NVTLGEIAMKFIREEAQES 89
>gi|301133578|gb|ADK63411.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 193
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 2 SATSTPSRSLKRQHSPPDNDLL--CPICFEL----IREAHITRCGHTFCFSCISKCV-EL 54
S + S L+ HS +N CP+C+E ++ AH+ RCGHT C + + E
Sbjct: 42 SCGACYSMGLRDNHSCIENATKNSCPVCYEFLFDSVKAAHVMRCGHTMHMGCFKQMITEQ 101
Query: 55 QIKCPKCSASLPDMNSVF 72
Q +CP C S+ DM+S +
Sbjct: 102 QYRCPICYKSMMDMSSSW 119
>gi|255983033|emb|CAP08982.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 219
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVFPN 74
+ C +C +L++E T CGH++C SCI C + + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVTTICGHSYCRSCIEGCWDQDVLKGVYSCPQCRETFTPRPNLRKN 70
Query: 75 FLLNELVQKHKIKSAQ 90
+L ELV+K K Q
Sbjct: 71 NMLAELVEKLKKTGLQ 86
>gi|154275862|ref|XP_001538776.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413849|gb|EDN09214.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 313
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
PP C +C EL ++ T CGH FC++CI V + +CP C
Sbjct: 255 PPSQQRKCTLCLELYKDPSATTCGHIFCWTCIRDWVREKPECPLC 299
>gi|171689004|ref|XP_001909442.1| hypothetical protein [Podospora anserina S mat+]
gi|170944464|emb|CAP70575.1| unnamed protein product [Podospora anserina S mat+]
Length = 515
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
D LLCP+C E T CGHTFC CI++ +++Q CP
Sbjct: 82 DETLLCPVCKTPFHEPITTSCGHTFCAWCINRALDIQPTCP 122
>gi|145258965|ref|XP_001402229.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Aspergillus niger CBS 513.88]
gi|134074844|emb|CAK38958.1| unnamed protein product [Aspergillus niger]
Length = 424
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APLESALRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELVQ 82
+ ELV+
Sbjct: 81 AVQELVE 87
>gi|403361204|gb|EJY80299.1| hypothetical protein OXYTRI_22311 [Oxytricha trifallax]
Length = 363
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP-NFLL 77
+++L C IC +L+ + T+CGHTFC +C+S ++ + +C C + + + P N +L
Sbjct: 10 EDELTCTICLDLLYQPVSTQCGHTFCKTCLSNSLKYKNQCTICREPILLSSDLLPVNIVL 69
Query: 78 NELVQKHK---IKSAQDSDGLRDFVASESQNLSLP 109
+L++K +K +++ + ++ + +LP
Sbjct: 70 QKLIEKKYPKIVKKIEEAAASKRLEQTQQEQQALP 104
>gi|380017069|ref|XP_003692488.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Apis florea]
Length = 543
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
+L C +C L+ + T CGHT+C+ C+ +C++ CP C SL D
Sbjct: 209 ELDCILCCRLLWKPVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLAD 255
>gi|328791939|ref|XP_395138.3| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Apis mellifera]
Length = 538
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
+L C +C L+ + T CGHT+C+ C+ +C++ CP C SL D
Sbjct: 204 ELDCILCCRLLWKPVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLAD 250
>gi|431923030|gb|ELK19647.1| Tripartite motif-containing protein 68 [Pteropus alecto]
Length = 237
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFPNFL 76
CPIC +RE CGH+FC CIS E+ CP C A + N + PN+
Sbjct: 16 CPICMTFLREPVSIDCGHSFCQGCISGLWEVPGEFHNWGYTCPLCRAPVQPRN-LRPNWQ 74
Query: 77 LNELVQKHKIKSAQDSDGLRDFV 99
L +V+K ++ GL+ V
Sbjct: 75 LANVVEKVRLLGLHPGMGLKGDV 97
>gi|440302935|gb|ELP95241.1| hypothetical protein EIN_430470 [Entamoeba invadens IP1]
Length = 241
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+ CPIC I+E +T+CGH FC SC+ + + +CP C+ S+
Sbjct: 10 ITCPICISPIKECCVTKCGHAFCKSCLEEALHFNPRCPYCNTSM 53
>gi|50305263|ref|XP_452591.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690357|sp|Q6CTZ8.1|RAD18_KLULA RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
RAD18
gi|49641724|emb|CAH01442.1| KLLA0C08756p [Kluyveromyces lactis]
Length = 427
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ L C IC + ++ + +T CGH+FC CI K ++ + KCP C + L + + + FL+
Sbjct: 27 DSLLRCHICKDFLKASVLTPCGHSFCSICIRKYLQKESKCPLCLSDLTE-SMLQKEFLVQ 85
Query: 79 EL----------VQKHKIKSAQDSDGLRDFVASESQNLSL 108
E+ +QKH S+Q+ + + + S+ + S+
Sbjct: 86 EICSSYVKLRGSLQKHLTISSQEEEKDNEIIISDEADTSV 125
>gi|292611998|ref|XP_695364.4| PREDICTED: tripartite motif-containing protein 16-like [Danio
rerio]
Length = 539
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
++ LCP+C EL+++ CGH +C CIS + + CP+C + ++ N
Sbjct: 9 DEFLCPVCLELLKDPVSLHCGHNYCKGCISGFWDQEDEKRVYSCPQCRQTFSQRPALAKN 68
Query: 75 FLLNELVQKHK 85
+L E+V+K K
Sbjct: 69 TMLAEVVEKLK 79
>gi|119623665|gb|EAX03260.1| tripartite motif-containing 31, isoform CRA_d [Homo sapiens]
Length = 196
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|426254717|ref|XP_004021023.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
TRIM50 [Ovis aries]
Length = 456
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CP+C E+ +E + +CGH++C C +S+ + +++CP+C + D +S PN
Sbjct: 11 EDRLQCPMCLEVFKEPLMLQCGHSYCKGCLVSVSRHLAAELRCPECRREV-DYSSSPPNV 69
Query: 76 LLNELVQ 82
L ++++
Sbjct: 70 SLAKVIE 76
>gi|383847579|ref|XP_003699430.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Megachile
rotundata]
Length = 481
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS--VFPNFL 76
D L C IC EL +A C HTFC CI+ ++ + +CP C + MN V NF+
Sbjct: 384 DEQLTCSICSELFVQATTLSCMHTFCHHCINSWIKKRNECPVCRTPVTSMNRSLVLDNFI 443
>gi|357621518|gb|EHJ73321.1| hypothetical protein KGM_05503 [Danaus plexippus]
Length = 436
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 22 LLCPICFELIREA---HITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
+LC IC +++ +A ++T+CGH F ++C+SK + CP+C + D
Sbjct: 3 ILCTICSDIVNQAENIYVTKCGHVFHYNCLSKWIARSKSCPQCRNKVTD 51
>gi|452837671|gb|EME39613.1| hypothetical protein DOTSEDRAFT_66560 [Dothistroma septosporum
NZE10]
Length = 394
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
C +C EL+++ +T CGH FC++C+++ + Q CP C
Sbjct: 343 CTLCLELMKDPSVTTCGHVFCWTCVTEWLREQPMCPLC 380
>gi|449018179|dbj|BAM81581.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 437
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
L CP+C L+ E T CGHTFC SC+++ ++ CP C L
Sbjct: 14 LDCPLCMRLLYEPLTTPCGHTFCRSCLARALDHASYCPICRTVL 57
>gi|409081419|gb|EKM81778.1| hypothetical protein AGABI1DRAFT_112025 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426196658|gb|EKV46586.1| hypothetical protein AGABI2DRAFT_193267 [Agaricus bisporus var.
bisporus H97]
Length = 567
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 13 RQHSPPDNDLLCPICFELIREAHITR-CGHTFCFSCI-SKCVELQIKCPKCSASLPDMNS 70
R+ +P D+ L CPI +L R+A T CG +C CI + +E CP CS +P ++
Sbjct: 299 REKTPTDSSLACPIDNKLFRDAVKTPCCGTNYCEECIQTHLLERDFVCPNCSKKVPSLDK 358
Query: 71 VFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+ + + V + K+ ++S + E ++LS
Sbjct: 359 LIVDKAMRNKVTDYIEKAIEESRVEESSINREGESLS 395
>gi|344305789|ref|XP_003421572.1| PREDICTED: E3 ubiquitin-protein ligase TRIM68 [Loxodonta
africana]
Length = 485
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-------QIKCPKCSASLPDMNSVFP 73
++ CPIC ++E CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLKEPVNIDCGHSFCHSCLSGLWEVPGESQNWGYTCPLCRAPVQPGN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLRDFV 99
N+ L +V+K ++ GL+ V
Sbjct: 72 NWQLANVVEKVRLLGLHPGMGLKGDV 97
>gi|351725147|ref|NP_001237594.1| uncharacterized protein LOC100306616 [Glycine max]
gi|255629089|gb|ACU14889.1| unknown [Glycine max]
Length = 205
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 2 SATSTPSRSLKRQHSPPDNDLL-CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPK 60
+S+ +S K+ PP + CPIC + TRCGH FC CI + Q KCP
Sbjct: 127 GGSSSMEQSFKKPPEPPKELVFNCPICMGPMVHEMSTRCGHIFCKDCIKAAISAQGKCPT 186
Query: 61 C 61
C
Sbjct: 187 C 187
>gi|348516870|ref|XP_003445960.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Oreochromis niloticus]
Length = 595
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+D CP+C L E T CGHTFC +CI + ++ ++CP C L + P L
Sbjct: 301 SDFECPLCIRLFFEPVTTPCGHTFCKNCIERSLDHNLRCPLCKQPLQEYFRNRKYNPTVL 360
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L +++ + + + D +E NL+
Sbjct: 361 LQDIMTQLFAPQLAERKQVHDAEMAELSNLT 391
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 20/104 (19%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL--PDMNSVFPNFLLNE 79
L CP+C L+ E CGHTFC C+ L KCP C L ++ + N LL
Sbjct: 4 LECPLCLCLMCEPVTVSCGHTFCRRCVGG--YLPSKCPLCKDRLKQKEVKNTKNNVLLIG 61
Query: 80 LVQK-------------HKIKSAQDSDGLRDFVASESQNLSLPD 110
+V+K K+K+ + ++ LR +A+E NL +PD
Sbjct: 62 VVEKCWPEEKRMKCQIQEKLKATEFAEALR--IANEGLNL-VPD 102
>gi|195131675|ref|XP_002010271.1| GI14783 [Drosophila mojavensis]
gi|193908721|gb|EDW07588.1| GI14783 [Drosophila mojavensis]
Length = 374
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 19 DNDLLCPICFELIR--EAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
D CPICFE++R E T+CGH FC CI + + KCP C+ L
Sbjct: 316 DTSYKCPICFEIVRRREPVSTKCGHVFCRICIRMALISRRKCPLCNKQL 364
>gi|255086085|ref|XP_002509009.1| histone ubiquitination protein group a [Micromonas sp. RCC299]
gi|226524287|gb|ACO70267.1| histone ubiquitination protein group a [Micromonas sp. RCC299]
Length = 222
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSASLPDMNSVFP 73
P ++ C IC EL +E +T+CGH +C+SCI K +++ +CP C A++ + N V P
Sbjct: 55 PANSYFECNICLELAQEPVVTQCGHLYCWSCIYKWLQVFPEAQQCPVCKAAVSE-NLVIP 113
>gi|281207537|gb|EFA81720.1| RING zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 388
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQ-IKCPKCSASLPDMNSVFPNFLLNEL 80
L CPIC + +A T CGHTFC C++ C+E + KCP CS D + P F + L
Sbjct: 11 LTCPICSDTFVDACDTSCGHTFCEFCLNCCLESKPDKCPVCSK---DPSPTHPAFTIRSL 67
Query: 81 VQK-HKIKSAQDSDG 94
+ +K +D DG
Sbjct: 68 CEMIAPVKPKEDDDG 82
>gi|440295613|gb|ELP88525.1| hypothetical protein EIN_344850 [Entamoeba invadens IP1]
Length = 388
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK 83
C IC++ I + +T CGHTFC+ CI++ V CP C + + LN L++
Sbjct: 5 CSICYDDIVDCTVTPCGHTFCYDCIAEWVRRTENCPICKSRV----------TLNSLIRV 54
Query: 84 HKIKSAQ 90
+K ++ Q
Sbjct: 55 NKNRNVQ 61
>gi|327279430|ref|XP_003224459.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Anolis carolinensis]
Length = 464
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+DL C +C L E T CGHTFC C+ +C++ + CP C SL
Sbjct: 166 SDLECSLCIRLFFEPVTTPCGHTFCKECVERCLDHRPNCPLCKQSL 211
>gi|383854414|ref|XP_003702716.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Megachile rotundata]
Length = 554
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
+L C +C L+ + T CGHT+C+ C+ +C++ CP C SL D
Sbjct: 218 ELDCILCCRLLWKPVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLAD 264
>gi|255983019|emb|CAP08974.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 392
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C +C +L++E T CGH++C SCI C + CP+C + ++ N +L
Sbjct: 15 CSVCLDLLKEPVTTACGHSYCRSCIEGCWDQDDLKGVYSCPQCRETFTPRPNLRKNNMLA 74
Query: 79 ELVQK 83
ELV+K
Sbjct: 75 ELVEK 79
>gi|413937833|gb|AFW72384.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 451
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ CP+C E++ + + CGH +C SC+S E +KC C + P FPN L+
Sbjct: 162 DVSCPLCMEMLYQPAVLNCGHVYCVSCLSSLNEETLKCHVCGSLHP---GDFPNVCLD 216
>gi|298710098|emb|CBJ31812.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 161
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCPKCSASLPDMNSV 71
D+ C IC + +RE +TRCGH FC+ C+ + + Q +CP C A + N +
Sbjct: 12 DSYFECNICLDGVREPVVTRCGHLFCWPCLYRWLNTNQTECPVCKAGVTASNVI 65
>gi|426245013|ref|XP_004016310.1| PREDICTED: E3 ubiquitin-protein ligase TRIM68 [Ovis aries]
Length = 494
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-------IKCPKCSASLPDMNSVFP 73
++ CPIC ++E CGH+FC SC+S E+ CP C A + N + P
Sbjct: 22 EVACPICMTFLKEPVSIDCGHSFCHSCLSGLWEVPGESQNWGYSCPLCRAPIQPRN-LRP 80
Query: 74 NFLLNELVQKHKIKSAQDSDGLR 96
N+ L +V+K + GLR
Sbjct: 81 NWQLANVVEKVRRLGLHPGMGLR 103
>gi|325090672|gb|EGC43982.1| peroxin 10 [Ajellomyces capsulatus H88]
Length = 217
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
PP C +C EL ++ T CGH FC++CI V + +CP C
Sbjct: 159 PPGQQRKCTLCLELYKDPSATTCGHIFCWTCIRDWVREKPECPLC 203
>gi|261200429|ref|XP_002626615.1| DNA repair protein rad18 [Ajellomyces dermatitidis SLH14081]
gi|239593687|gb|EEQ76268.1| DNA repair protein rad18 [Ajellomyces dermatitidis SLH14081]
gi|239607436|gb|EEQ84423.1| DNA repair protein rad18 [Ajellomyces dermatitidis ER-3]
Length = 418
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
TP L R S L C +C + IT C HTFC CI +C+ + KCP C +
Sbjct: 15 GTPLSQLARVESA----LRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRTA 70
Query: 65 LPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRK 122
++ + ++ + E+V K+ + +F + + P+ +L L +RK
Sbjct: 71 DQELK-LRRDWAMQEMVDSFKLARPS----VLEFARTATVRTDEPEEDLQLPAAKKRK 123
>gi|340057242|emb|CCC51585.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 234
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
D CPIC+ + +TRCGH FC+ C+S+ + P+C
Sbjct: 4 GDFSCPICYNTAAQPVVTRCGHLFCWGCLSRWLRRPSALPEC 45
>gi|71029778|ref|XP_764532.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351486|gb|EAN32249.1| hypothetical protein TP04_0895 [Theileria parva]
Length = 284
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 12 KRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSC-ISKCVELQIKCPKCSASLPDMNS 70
K+ P++ C ICF+ +++ +TRCGH FC+SC +S +CP C + + N
Sbjct: 11 KKPEESPNSKFECNICFDEVKDPVVTRCGHLFCWSCLLSWMNRRNYQCPICQSGISRENV 70
Query: 71 V 71
+
Sbjct: 71 I 71
>gi|413937834|gb|AFW72385.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 457
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ CP+C E++ + + CGH +C SC+S E +KC C + P FPN L+
Sbjct: 168 DVSCPLCMEMLYQPAVLNCGHVYCVSCLSSLNEETLKCHVCGSLHP---GDFPNVCLD 222
>gi|57102610|ref|XP_542351.1| PREDICTED: E3 ubiquitin-protein ligase TRIM68 [Canis lupus
familiaris]
Length = 485
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-------IKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPVSIDCGHSFCHSCLSGLWEVPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR 96
N+ L +V+K + GL+
Sbjct: 72 NWQLANVVEKVHLLGLHPGMGLK 94
>gi|21064147|gb|AAM29303.1| AT24563p [Drosophila melanogaster]
gi|220949790|gb|ACL87438.1| elfless-PA [synthetic construct]
gi|220958928|gb|ACL92007.1| elfless-PA [synthetic construct]
Length = 187
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 24 CPICFELIRE--AHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
CP+C E +RE T CGH FC +CI + V+ CP C P+ + +F
Sbjct: 136 CPVCLEDVREKLPVSTNCGHVFCKACIKRAVDTGRVCPLCGVDEPEFHRIF 186
>gi|195126651|ref|XP_002007784.1| GI12194 [Drosophila mojavensis]
gi|193919393|gb|EDW18260.1| GI12194 [Drosophila mojavensis]
Length = 1018
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 6 TPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIKCPKCS 62
PS L + P LLCP+C +L+R T CGHTFC C I++C IK P+ +
Sbjct: 170 VPSPVLGEDYDP----LLCPLCSDLLRSPVTTNCGHTFCGQCCETITQCNICHIKFPRSA 225
Query: 63 ASLP 66
+P
Sbjct: 226 ERMP 229
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMN 69
+D C +C + + +T CGHT+C C+ +C++ CP C + L ++N
Sbjct: 658 SDFDCVLCCRTLWKPVVTPCGHTYCLVCLDRCMDYNSSCPLCMSPLVELN 707
>gi|195108437|ref|XP_001998799.1| GI23432 [Drosophila mojavensis]
gi|193915393|gb|EDW14260.1| GI23432 [Drosophila mojavensis]
Length = 675
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 3 ATSTPSRSLKRQHSPPDNDL-----LCPICFELIREAHITRCGHTFCFSCISKCVELQIK 57
A ST R++ + P ++L +CPIC ++ I CGH FC C+ + +
Sbjct: 590 AVSTFRRNIDSERPPTKDELDAAGSVCPICHDVYTAPIILECGHIFCDECVQTWFKREQT 649
Query: 58 CPKCSASLPD 67
CP C A + D
Sbjct: 650 CPMCRAKVSD 659
>gi|145508419|ref|XP_001440159.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407365|emb|CAK72762.1| unnamed protein product [Paramecium tetraurelia]
Length = 251
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 15 HSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMN 69
HS ++ +C IC ++ + IT+CGH FC CIS+ ++ + +CP C + N
Sbjct: 8 HSVDCSEYMCVICLQVFYKPIITQCGHNFCGKCISEWMQKKKQCPYCRKEYQNYN 62
>gi|443690859|gb|ELT92877.1| hypothetical protein CAPTEDRAFT_204924 [Capitella teleta]
Length = 359
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 20 NDLLCPICFELIREAHITR-CGHTFCFSCISKCV--ELQIKCPKCSASLPDMNSVFPNFL 76
++ CPIC E+++EA I R CG++FC CI + CP+C A +++ N
Sbjct: 243 DEFKCPICREMLKEAAIIRCCGYSFCDECIRDALLDSEHHTCPQCGAVGQPPDALVANKT 302
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNL 106
L ++V H ++ G R V+ S +L
Sbjct: 303 LRKMVDNH-----ENGTGWRSVVSRISASL 327
>gi|402902908|ref|XP_003914330.1| PREDICTED: E3 ubiquitin-protein ligase RNF125 [Papio anubis]
Length = 232
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 4 TSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPK 60
++TP R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 16 SATP-RALQRRGDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPY 74
Query: 61 CSASLP 66
C A LP
Sbjct: 75 CRAYLP 80
>gi|297661171|ref|XP_002809149.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31 isoform 2 [Pongo
abelii]
Length = 461
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSV-RKNAIRFNSLL 71
Query: 78 NELVQ 82
LV+
Sbjct: 72 RNLVE 76
>gi|402221069|gb|EJU01139.1| hypothetical protein DACRYDRAFT_116947 [Dacryopinax sp. DJM-731
SS1]
Length = 328
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 19 DNDLLCPICFELIREAHITR-CGHTFCFSCISKCVELQIK--CPKCSASLPDMNSVFPNF 75
+ D CPICF+LI H+ CGH+ C C +K + + K C C A + P
Sbjct: 117 EEDFTCPICFDLIVACHLANPCGHSACGECSTKWSQRKCKPTCFACRAPMNKTTPFIPGL 176
Query: 76 LLNELVQKHKIKSAQDSD 93
+++ L++K A++ D
Sbjct: 177 IVDNLIEKQISSLAENGD 194
>gi|241599212|ref|XP_002404840.1| zinc finger protein, putative [Ixodes scapularis]
gi|215500501|gb|EEC09995.1| zinc finger protein, putative [Ixodes scapularis]
Length = 197
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
+ +CPIC E+ ++ CGHTFC +C+++C + KCP C
Sbjct: 20 EFVCPICLEIFQKPVTISCGHTFCSTCLAQCKQDDPKCPLC 60
>gi|397310710|gb|AFO38365.1| TRIM5 alpha [Ovis aries]
Length = 509
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISK-------CVELQIKCPKCSASLPDMNSVFP 73
++ CPIC EL+ E CGH+FC +CI+ E Q CP C S N + P
Sbjct: 12 EVTCPICLELLTEPQSLDCGHSFCQACITANNEESIIGQEGQKSCPVCRVSFEPGN-LRP 70
Query: 74 NFLLNELVQK-HKIKSAQDSDGLRDFVASESQNLSL 108
N + +VQ+ ++K + + + R+ A + L L
Sbjct: 71 NRHVANIVQRLREVKVSPEVEQERNLCAHHGEKLQL 106
>gi|116194422|ref|XP_001223023.1| hypothetical protein CHGG_03809 [Chaetomium globosum CBS 148.51]
gi|88179722|gb|EAQ87190.1| hypothetical protein CHGG_03809 [Chaetomium globosum CBS 148.51]
Length = 822
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
C +C + IT C HTFC CI +C+ + KCP C A L + + N+ L E V
Sbjct: 29 CHVCKDFYNSPMITSCSHTFCSICIRRCLSVDGKCPLCRA-LDQESKLRGNWALREAV 85
>gi|328705042|ref|XP_003242677.1| PREDICTED: hypothetical protein LOC100570324 [Acyrthosiphon
pisum]
Length = 281
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 24 CPICFELIREAHI-TRCGHTFCFSCISKCVE-LQIKCPKCSASLPDMNSVFPNFLLNELV 81
C +C EL+ E+ T CGH F F CI + + CPKC L D+ +FP+
Sbjct: 11 CTLCNELLGESTFSTECGHIFHFRCIHEWYRSKEHSCPKCKTHLTDIYKLFPS-----GS 65
Query: 82 QKHKIKSAQDSDGL 95
QK K+K+ ++ D L
Sbjct: 66 QKFKVKTTKEMDSL 79
>gi|397310692|gb|AFO38356.1| TRIM5 alpha [Capra hircus]
Length = 509
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-------KCPKCSASLPDMNSVFP 73
++ CPIC EL+ E CGHTFC +CI+ E I CP C S N P
Sbjct: 12 EVTCPICLELLTEPRSLDCGHTFCQACITANNEESIVGQEGKKSCPVCRVSFEPGNPR-P 70
Query: 74 NFLLNELVQK-HKIKSAQDSDGLRDFVASESQNLSL 108
N + +VQ+ ++K + + + R+ A + L L
Sbjct: 71 NRHVANIVQRLREVKVSPEVEQERNLCAHHGEKLQL 106
>gi|342890595|gb|EGU89386.1| hypothetical protein FOXB_00100 [Fusarium oxysporum Fo5176]
Length = 895
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
C IC++ + IT C H FC +CI + +++Q KCP C L D NS+
Sbjct: 657 CAICYDNPNDPVITTCKHVFCRNCILRAIQIQHKCPMCRNKL-DENSLL 704
>gi|326665214|ref|XP_689207.4| PREDICTED: tripartite motif-containing protein 16 [Danio rerio]
Length = 550
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
N C +C L++E CGH++C +CI+ C CP+C + ++ N
Sbjct: 11 NQFSCSVCLGLLKEPVTIPCGHSYCMNCITDCWNQDEQRRVYSCPQCRQTFTPRPALNKN 70
Query: 75 FLLNELVQKHKIKSAQDSD 93
+ E+V+K K+ Q+ D
Sbjct: 71 VVFAEIVEKLKMTRVQNVD 89
>gi|291235472|ref|XP_002737668.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 701
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVE----LQIKCPKCSA--SLPD-MNSV 71
DN L+C +C E R A I C H+FC CI K V+ I CP C LP+ SV
Sbjct: 14 DNFLVCTVCSERYRNAKILPCLHSFCEQCIDKLVQKSGGKNIPCPVCRRIHDLPEGAGSV 73
Query: 72 FPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNL 106
N LNELV G RD +ES NL
Sbjct: 74 QSNVFLNELVVLL---------GKRDKKTNESHNL 99
>gi|321469893|gb|EFX80871.1| hypothetical protein DAPPUDRAFT_188104 [Daphnia pulex]
Length = 958
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 MSATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCP 59
+ A T L+ + + L CP C ++A +T+C H FCF C+ E Q KCP
Sbjct: 882 IEAAGTADEVLREELREYKDTLTCPSCKVTRKDAVLTKCFHVFCFDCLRTRYETRQRKCP 941
Query: 60 KCSAS 64
KC+A+
Sbjct: 942 KCNAA 946
>gi|255982785|emb|CAP08942.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
gi|255982822|emb|CAP08961.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 552
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVFPNFLLN 78
C +C +L++E CGH++C SCI C + + CP+C + + N +L
Sbjct: 15 CSVCLDLLKEPVTIPCGHSYCRSCIEGCWDQDVLKGVYSCPQCRHTFTTRPMLMKNNMLA 74
Query: 79 ELVQKHKIKSAQ 90
ELV+K K Q
Sbjct: 75 ELVEKLKKTGLQ 86
>gi|296192250|ref|XP_002743978.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Callithrix
jacchus]
Length = 487
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E + +CGH++C SC+ ++ +++CP C ++ D +S PN
Sbjct: 11 EDRLQCPICLEVFKEPLMLQCGHSYCKSCLVSLSCHLDAELRCPVCRQAV-DGSSSLPNV 69
Query: 76 LLNELVQKHKI 86
L +++ ++
Sbjct: 70 SLARVIEALRL 80
>gi|292612000|ref|XP_695494.4| PREDICTED: tripartite motif-containing protein 16 [Danio rerio]
Length = 537
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-----CPKCSASLPDMNSVFPNF 75
+ +CP+C +L+++ CGH++C SCI+ + + + CP+C S ++ N
Sbjct: 12 EFMCPVCLDLLKDPVTLHCGHSYCKSCITDFWDQEYEKRIYSCPQCRQSFTPRPALAKNT 71
Query: 76 LLNELVQKHK 85
+L E+V+K K
Sbjct: 72 MLAEVVEKLK 81
>gi|156101177|ref|XP_001616282.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805156|gb|EDL46555.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 519
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQK 83
C ICF+ +R+ +T+CGH FC+ C+ ++ CP C A + N V P + + +
Sbjct: 364 CNICFDDVRDPVVTKCGHLFCWLCLCAWIKKNNDCPVCKAEVSREN-VIPLYGRGKNSSE 422
Query: 84 HKIKSAQD 91
HK + ++
Sbjct: 423 HKYSNVEE 430
>gi|157115358|ref|XP_001652570.1| hypothetical protein AaeL_AAEL007167 [Aedes aegypti]
gi|108876942|gb|EAT41167.1| AAEL007167-PA [Aedes aegypti]
Length = 277
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 18 PDNDLLCPICFELI--REAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
P + CPIC E I ++A T CGH FC +CI++ ++++ KCP C +L
Sbjct: 217 PSVSVTCPICLESIFHQQAASTVCGHLFCKNCITQEIQIRKKCPMCKRAL 266
>gi|291239955|ref|XP_002739887.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 1046
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ----IKCPKCSA--SLPD-MNSV 71
+N L+C +C E R A I C H+FC CI K +E I CP C LP+ +SV
Sbjct: 14 ENFLVCTVCSERYRNAKILPCLHSFCEQCIDKLLEKSGGKGIPCPVCRRVHDLPEGASSV 73
Query: 72 FPNFLLNELV 81
PN +NELV
Sbjct: 74 QPNIFVNELV 83
>gi|426336602|ref|XP_004031557.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2, partial [Gorilla gorilla gorilla]
Length = 747
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF---- 75
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF
Sbjct: 438 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASR-NFNITV 496
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ ++ D + D SE NL+
Sbjct: 497 LAEELIFRYLPDELSDRKRIYDEEMSELSNLT 528
>gi|308484767|ref|XP_003104583.1| hypothetical protein CRE_23331 [Caenorhabditis remanei]
gi|308257783|gb|EFP01736.1| hypothetical protein CRE_23331 [Caenorhabditis remanei]
Length = 396
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 10/69 (14%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVE-------LQIKCPKCS--ASLPDMNSVFPN 74
CPIC+ + + CGHT C +CI + VE +IKCP+C ++P +N + N
Sbjct: 21 CPICYTVYDKPMQMGCGHTICSTCIGRLVERVKTSGPTEIKCPECRKPTTVP-VNGLPVN 79
Query: 75 FLLNELVQK 83
+ + E+VQK
Sbjct: 80 YRIQEIVQK 88
>gi|355754968|gb|EHH58835.1| E3 ubiquitin-protein ligase RNF125 [Macaca fascicularis]
Length = 232
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 4 TSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPK 60
++TP R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 16 SATP-RALERRGDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPY 74
Query: 61 CSASLP 66
C A LP
Sbjct: 75 CRAYLP 80
>gi|355701897|gb|EHH29250.1| E3 ubiquitin-protein ligase RNF125 [Macaca mulatta]
gi|380814086|gb|AFE78917.1| E3 ubiquitin-protein ligase RNF125 [Macaca mulatta]
gi|383414009|gb|AFH30218.1| E3 ubiquitin-protein ligase RNF125 [Macaca mulatta]
Length = 232
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 4 TSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPK 60
++TP R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 16 SATP-RALERRGDPQLPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPY 74
Query: 61 CSASLP 66
C A LP
Sbjct: 75 CRAYLP 80
>gi|326432314|gb|EGD77884.1| hypothetical protein PTSG_09518 [Salpingoeca sp. ATCC 50818]
Length = 233
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
D++ C IC + + + +TRCGH FC+ C+ + + + CP C A + +SV P
Sbjct: 79 DSEFSCNICLDAVSDPVVTRCGHLFCWPCLHEWLRRKPDCPVCKAGV-TQDSVIP 132
>gi|73917571|sp|Q95KF1.3|RN125_MACFA RecName: Full=E3 ubiquitin-protein ligase RNF125; AltName:
Full=RING finger protein 125
gi|13874603|dbj|BAB46910.1| hypothetical protein [Macaca fascicularis]
Length = 232
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 4 TSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPK 60
++TP R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 16 SATP-RALERRGDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPY 74
Query: 61 CSASLP 66
C A LP
Sbjct: 75 CRAYLP 80
>gi|73957766|ref|XP_546929.2| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Canis lupus
familiaris]
Length = 487
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E + +CGH++C C +S+ ++ +++CP C + D +S PN
Sbjct: 11 EDRLQCPICLEVFKEPMMLQCGHSYCKGCLVSLSRHLDSELRCPVCQQEV-DSSSSPPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLARVIE 76
>gi|405120155|gb|AFR94926.1| retinoblastoma-binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 600
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 13 RQHSPPDNDLLCPICFELIREAHITRCGH-TFCFSCI-SKCVELQIKCPKCSASLPDMNS 70
R P + DL CP+C +L+ EA T C + FC C+ + V+ +CP C + +P ++
Sbjct: 313 RDQEPLEADLTCPLCKKLVWEAVRTPCCNIAFCEECVQTYLVDHDFECPHCESKVPSLDR 372
Query: 71 VFP---------NFLLNELVQKHKIKSAQDSDGLRDFVASESQN 105
+ P N++ +EL K K A+ D V E++N
Sbjct: 373 LKPDEDLRKRSRNYVDHEL---QKNKEAKGDDDADADVKEEAEN 413
>gi|348507549|ref|XP_003441318.1| PREDICTED: tripartite motif-containing protein 16-like
[Oreochromis niloticus]
Length = 550
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCIS---KCVELQ---IKCPKCSASLPDMNSVFP 73
N L C IC L+R + CGH FC CI C +L+ +CP+C P +
Sbjct: 11 NHLCCQICRNLLRNPVMIPCGHNFCIRCIQDQWDCDQLRSSLYRCPECEYEFPSRPQLIK 70
Query: 74 NFLLNELVQKHKI---KSAQDSDG 94
N L E+V++ ++ K Q S+G
Sbjct: 71 NTTLAEVVRETEMSCNKEQQSSEG 94
>gi|270008553|gb|EFA05001.1| hypothetical protein TcasGA2_TC015080 [Tribolium castaneum]
Length = 334
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D +L C IC EL +A C HTFC CI + ++ + CP C S+ ++ P +L+
Sbjct: 160 DTELTCSICSELFIKAVTLNCSHTFCKFCIDRWMKNKSNCPICRKSI---TNIAPTLVLD 216
Query: 79 ELVQKHKIKSAQDSDGLR------------DFVASESQNLSLPDV--NLMLEVLNQRKHL 124
++K + D R + +S +++ + DV ++E+ + +
Sbjct: 217 NFIEKFIKTQSDDVKETRKNLIQQREEMVVNMASSSTRSPEVVDVEPGRVIEIYSDDEDY 276
Query: 125 LEAESSVAQYKLL 137
L+ E + Y L
Sbjct: 277 LDVEDEDSDYNYL 289
>gi|219521499|gb|AAI43469.1| LONRF2 protein [Homo sapiens]
Length = 520
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 211 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVL 270
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D SE NL+
Sbjct: 271 AEELIFRYLPDELSDRKRIYDEEMSELSNLT 301
>gi|67678434|gb|AAH97790.1| LOC432253 protein, partial [Xenopus laevis]
Length = 599
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISK--CVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ C IC + + + CGHTFC +CI+ CP+C A P N + P++ L
Sbjct: 53 DITCSICLDDLTDPVYITCGHTFCRNCITTHWGTSQGYLCPECRAVCP-RNQIVPDYRLG 111
Query: 79 ELVQKHKIKSAQDSDGLRD-FVASESQN---LSLPDVNLMLEV 117
L+ K K + + SD +++ A+E + L DVN L +
Sbjct: 112 NLISKIK-QGIKKSDAMQENLTAAEPDHPIQLVWTDVNGRLSL 153
>gi|444731450|gb|ELW71803.1| E3 ubiquitin-protein ligase TRIM68 [Tupaia chinensis]
Length = 496
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVE-------LQIKCPKCSASLPDMNSVF 72
++ CPIC +RE CGH+FC SC+S E CP C A + N +
Sbjct: 12 EEVACPICMAFLREPVSIDCGHSFCHSCLSGLWEAPGESQNWSHTCPLCRAPVQPRN-LR 70
Query: 73 PNFLLNELVQKHKIKSAQDSDGLRDFV 99
PN+ L +V+K ++ + GL+ V
Sbjct: 71 PNWQLASVVEKIRLLGLRLEVGLKSDV 97
>gi|332251526|ref|XP_003274896.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Nomascus leucogenys]
Length = 754
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF---- 75
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF
Sbjct: 445 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASR-NFNITV 503
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ ++ D + D SE NL+
Sbjct: 504 LAEELIFRYLPDELSDRKRIYDEEMSELSNLT 535
>gi|260809851|ref|XP_002599718.1| hypothetical protein BRAFLDRAFT_249762 [Branchiostoma floridae]
gi|229284999|gb|EEN55730.1| hypothetical protein BRAFLDRAFT_249762 [Branchiostoma floridae]
Length = 275
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKC--SASLPD--MNSVF 72
D L CP+C R+ I C HTFC C+ + V Q ++CP C SLPD ++ +
Sbjct: 13 DQFLTCPVCVLHFRDPRILPCLHTFCKGCLEEWVTKQQPLECPTCRTQVSLPDQGVDGLR 72
Query: 73 PNFLLNELVQKHKIKSAQDSDGLRDF 98
NF +N L+ K + G F
Sbjct: 73 ANFYVNNLLDFAAAKKGAEPGGRSKF 98
>gi|109121877|ref|XP_001099929.1| PREDICTED: e3 ubiquitin-protein ligase RNF125 [Macaca mulatta]
Length = 232
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 4 TSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPK 60
++TP R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 16 SATP-RALERRGDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPY 74
Query: 61 CSASLP 66
C A LP
Sbjct: 75 CRAYLP 80
>gi|449474913|ref|XP_002195040.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Taeniopygia guttata]
Length = 525
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+DL C +C + E T CGHTFC C+ +C++ + CP C SL + P L
Sbjct: 216 SDLECSLCIRMFFEPVTTPCGHTFCKECLERCLDHRPNCPLCKQSLREYLKAGRYSPTVL 275
Query: 77 LNELV 81
L +++
Sbjct: 276 LQDIM 280
>gi|147901488|ref|NP_001085170.1| ring finger protein 112 [Xenopus laevis]
gi|83318197|gb|AAI08431.1| LOC432253 protein [Xenopus laevis]
Length = 612
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISK--CVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ C IC + + + CGHTFC +CI+ CP+C A P N + P++ L
Sbjct: 66 DITCSICLDDLTDPVYITCGHTFCRNCITTHWGTSQGYLCPECRAVCP-RNQIVPDYRLG 124
Query: 79 ELVQKHKIKSAQDSDGLRD-FVASESQN---LSLPDVNLMLEV 117
L+ K K + + SD +++ A+E + L DVN L +
Sbjct: 125 NLISKIK-QGIKKSDAMQENLTAAEPDHPIQLVWTDVNGRLSL 166
>gi|291236304|ref|XP_002738080.1| PREDICTED: ring finger protein 41-like [Saccoglossus kowalevskii]
Length = 326
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 10 SLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL--QIKCPKCSASLPD 67
++R + PD +LLC IC ++ +A +TRCGHTFC C+ + CP C +
Sbjct: 4 GVQRFVTTPDQNLLCGICSCVVEDAVLTRCGHTFCELCLDTWLTRPNTDTCPCCRGRISK 63
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASES 103
V P + L +V I+ G + V ES
Sbjct: 64 YQ-VSPVWSLRAIVNSLDIECDHKERGCKMVVRMES 98
>gi|255982814|emb|CAP08957.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 551
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-----CPKCSASLPDMNSVFPN 74
+ C +C +L++E + CGH++C SCI C + + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVVIPCGHSYCRSCIEGCWDQDVLKRVYCCPQCRETFTPRPTLRKN 70
Query: 75 FLLNELVQK 83
+L ELV+K
Sbjct: 71 NMLAELVEK 79
>gi|195454048|ref|XP_002074062.1| GK14441 [Drosophila willistoni]
gi|194170147|gb|EDW85048.1| GK14441 [Drosophila willistoni]
Length = 207
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 19 DNDLLCPICFELI--REAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
DN CP+C E RE T+CGH FC CI ++ KCP C+ L
Sbjct: 149 DNSYRCPVCLESASQREPTSTKCGHVFCKVCIQSAIQSSHKCPICNKKL 197
>gi|195400076|ref|XP_002058644.1| GJ14535 [Drosophila virilis]
gi|194142204|gb|EDW58612.1| GJ14535 [Drosophila virilis]
Length = 679
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 3 ATSTPSRSLKRQHSPPDNDL-----LCPICFELIREAHITRCGHTFCFSCISKCVELQIK 57
A ST R++ + P ++L +CPIC + I CGH FC C+ + +
Sbjct: 594 AISTFRRNIDSERPPTKDELDAAGSVCPICHDAYNSPIILECGHIFCDECVQTWFKREQT 653
Query: 58 CPKCSASLPD 67
CP C A + D
Sbjct: 654 CPMCRAKVSD 663
>gi|326665621|ref|XP_002660428.2| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Danio rerio]
Length = 579
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
N +CP+C L+++ CGH++C SCI+ C + CP C S ++ N
Sbjct: 11 NQFMCPVCLNLLQDPVTIPCGHSYCMSCITDCWNQEEQKRIYSCPLCKQSFTPRPALAKN 70
Query: 75 FLLNELVQK 83
+ E+++K
Sbjct: 71 VVFAEMLEK 79
>gi|68032982|gb|AAY84832.1| neuroblastoma apoptosis-related protease [Homo sapiens]
Length = 754
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF---- 75
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF
Sbjct: 445 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASR-NFNITV 503
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ ++ D + D SE NL+
Sbjct: 504 LAEELIFRYLPDELSDRKRIYDEEMSELSNLT 535
>gi|426352123|ref|XP_004043568.1| PREDICTED: zinc finger protein RFP [Gorilla gorilla gorilla]
Length = 733
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNFLLNEL 80
CP+C + E + CGH C +C+++C E + CP+C + P + + PN L +
Sbjct: 231 CPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRH-MRPNRHLANV 289
Query: 81 VQ 82
Q
Sbjct: 290 TQ 291
>gi|348559168|ref|XP_003465388.1| PREDICTED: tripartite motif-containing protein 34-like [Cavia
porcellus]
Length = 578
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPKCSASLPDMNSVFPNF 75
+ ++ CPIC EL+ E CGH+ C +C++ E K CP C P N ++PN
Sbjct: 106 EKEVTCPICLELLTEPLSLGCGHSLCQACVTLHNEKTGKDSGCPVCGIRDPRGN-LWPNH 164
Query: 76 LLNELVQK-HKIKSAQDSDGLRDFVASESQNLSL 108
L ++V+K ++K + DF A + L L
Sbjct: 165 HLADIVEKLREVKLSTGIGKKGDFCALHGEKLQL 198
>gi|327266437|ref|XP_003218012.1| PREDICTED: e3 ubiquitin-protein ligase TRIM41-like [Anolis
carolinensis]
Length = 455
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 1 MSATSTPSRSLKRQHSPPDNDLLCPICFELIRE-AHITRCGHTFCFSCISKCVELQIKCP 59
M+ PS L+ +D C IC + ++ I CGH +C +CIS+C + CP
Sbjct: 1 MAVGGHPSARLQ-------DDATCSICLDYFQDPVMIIDCGHNYCRACISQCQGERSLCP 53
Query: 60 KCSASLPDMNSVFPNFLLNELVQ 82
+C P N + PN L LV+
Sbjct: 54 RCRIPFPSDN-LLPNRDLRNLVE 75
>gi|225682068|gb|EEH20352.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Paracoccidioides brasiliensis Pb03]
Length = 395
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
STP L R S L C +C + IT C HTFC CI +C+ + KCP C +
Sbjct: 15 STPIPKLARVESA----LRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPACRSG 70
Query: 65 LPDMNSVFPNFLLNELVQKHKI 86
++ + N+ + E+V K+
Sbjct: 71 DQELK-LRRNWAMQEMVDSFKL 91
>gi|224000760|ref|XP_002290052.1| hypothetical protein THAPSDRAFT_268817 [Thalassiosira pseudonana
CCMP1335]
gi|220973474|gb|EED91804.1| hypothetical protein THAPSDRAFT_268817 [Thalassiosira pseudonana
CCMP1335]
Length = 331
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 24 CPICFELIREAHITR-CGHTFCFSCISKCVELQIK--CPKCSASLPDMNSVFPNFLLNEL 80
CP+C I++ I + C H FC CI KC+ + K CP+C +P S+ P+ + L
Sbjct: 99 CPVCLSYIKQTRIVKECLHRFCNECIQKCLRVSPKKECPQCRVHIPSRRSLRPDPNFDNL 158
Query: 81 VQ 82
++
Sbjct: 159 IK 160
>gi|260792738|ref|XP_002591371.1| hypothetical protein BRAFLDRAFT_227329 [Branchiostoma floridae]
gi|229276576|gb|EEN47382.1| hypothetical protein BRAFLDRAFT_227329 [Branchiostoma floridae]
Length = 653
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 15 HSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKC--SASLPD--M 68
H+ + L CP+C R+ + C HTFC C+ + Q ++CP C SLPD +
Sbjct: 9 HNFDEQFLTCPVCMLHFRDPRVLPCLHTFCRECLQEWATKQQPLECPTCRTQVSLPDQGV 68
Query: 69 NSVFPNFLLNELVQKHKIKSAQDSDGL 95
+ + NF +N L+ +K + L
Sbjct: 69 DGLRTNFYVNNLLDFAAVKKGAGPENL 95
>gi|397310718|gb|AFO38369.1| TRIM5 alpha [Ovis aries]
Length = 509
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISK-------CVELQIKCPKCSASLPDMNSVFP 73
++ CPIC EL+ E CGHTFC +CI+ E + CP C S N + P
Sbjct: 12 EVTCPICLELLTEPQSLDCGHTFCQACIAANNKEAIIGQEGKKSCPVCRVSFEPGN-LRP 70
Query: 74 NFLLNELVQK-HKIKSAQDSDGLRDFVASESQNLSL 108
N + +VQ+ ++K + + + R+ A + L L
Sbjct: 71 NRHVANIVQRLREVKVSPEVEQERNLCAHHGEKLQL 106
>gi|51948346|gb|AAU14277.1| COP1-like protein [Ostreococcus tauri]
Length = 395
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 5 STPS-RSLKRQHSPPDNDLLCPICFELIREAH-ITRCGHTFCFSC--------ISKCVEL 54
+TPS R + +H + CPIC + +AH + CGHTFC +C S E
Sbjct: 3 ATPSTRGARGRHDAVRTLVTCPICLDPFSDAHCVATCGHTFCHACARATLDASASGGGER 62
Query: 55 QIKCPKCSASLPDMNSVFPNFLLNELV 81
CP C + + + PN +N +V
Sbjct: 63 MAACPTCGSRFTN-EQLVPNAAVNGMV 88
>gi|380796663|gb|AFE70207.1| LON peptidase N-terminal domain and RING finger protein 2, partial
[Macaca mulatta]
Length = 565
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 256 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVL 315
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D SE NL+
Sbjct: 316 AEELIFRYLPDELSDRKRIYDEEMSELSNLT 346
>gi|154303593|ref|XP_001552203.1| hypothetical protein BC1G_08681 [Botryotinia fuckeliana B05.10]
Length = 274
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
DN C IC E + IT C H F CI + +ELQ KCP C A L +
Sbjct: 29 DNHEECSICLEELHNPVITTCKHVFGQECIERTIELQQKCPMCRAHLGN 77
>gi|432878524|ref|XP_004073351.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Oryzias latipes]
Length = 1024
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCI-SKCVELQIKCPKCSASL 65
L CP C +++A +T+C H FCF C+ ++ Q KCPKC+A+
Sbjct: 969 LTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAF 1013
>gi|402891696|ref|XP_003909078.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Papio anubis]
Length = 754
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF---- 75
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF
Sbjct: 445 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASR-NFNITV 503
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ ++ D + D SE NL+
Sbjct: 504 LAEELIFRYLPDELSDRKRIYDEEMSELSNLT 535
>gi|390601239|gb|EIN10633.1| LON-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 607
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
S +P+ R N+L C ICF L + T C HTFC C+ + ++ CP C
Sbjct: 209 SRVPSPTPPAARFEKDVLNELTCEICFALFFQPITTPCQHTFCAKCLQRSLDHSNSCPLC 268
Query: 62 SASLP 66
LP
Sbjct: 269 RQELP 273
>gi|148528975|ref|NP_940863.3| LON peptidase N-terminal domain and RING finger protein 2 [Homo
sapiens]
gi|313104224|sp|Q1L5Z9.3|LONF2_HUMAN RecName: Full=LON peptidase N-terminal domain and RING finger
protein 2; AltName: Full=Neuroblastoma apoptosis-related
protease; AltName: Full=RING finger protein 192
Length = 754
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF---- 75
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF
Sbjct: 445 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASR-NFNITV 503
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ ++ D + D SE NL+
Sbjct: 504 LAEELIFRYLPDELSDRKRIYDEEMSELSNLT 535
>gi|440799133|gb|ELR20194.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1348
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD------MNSVFPNFLL 77
C ICFE I + IT CGH +C +CI + + +CP C L + V +
Sbjct: 888 CVICFETITQLTITPCGHMYCRACIESALGVASRCPTCRNPLTRGQLTQVLEEVRADQQH 947
Query: 78 NELVQKHKIKSAQDSDGL 95
N+ QK I+ + GL
Sbjct: 948 NKQEQKEAIEEKHEVSGL 965
>gi|327266642|ref|XP_003218113.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 473
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPKCSASLPDMNSVFPNFLLNE 79
+L CPIC E +E CGH FC SC+ +C E + CP+C + + + PN L
Sbjct: 13 ELSCPICLEYFKEPLSLSCGHNFCQSCLDQCWEGKEASCPQCREKVQE-GDIRPNRQLVN 71
Query: 80 LVQ 82
+V+
Sbjct: 72 VVE 74
>gi|291242634|ref|XP_002741211.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
kowalevskii]
Length = 721
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVE----LQIKCPKC--SASLPD-MNSVF 72
N L+C IC E R A I C H+FC CI K E + CP C LPD + S+
Sbjct: 15 NSLICAICSERYRNARILPCLHSFCEQCIGKLTEKAGGKTVLCPTCRRGHDLPDGLASIP 74
Query: 73 PNFLLNELV 81
N LNEL
Sbjct: 75 KNLFLNELA 83
>gi|124804146|ref|XP_001347915.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496168|gb|AAN35828.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 689
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
+++ C IC +L+ CGH FC CI K E + CP C +++ D ++ N LL E
Sbjct: 221 SEVECAICMKLLIVPVTIPCGHNFCRDCIEKAKEYKNLCPLCRSNMGDKKNI--NLLLGE 278
Query: 80 LVQK 83
L+++
Sbjct: 279 LIKQ 282
>gi|297666903|ref|XP_002811742.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Pongo abelii]
Length = 754
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF---- 75
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF
Sbjct: 445 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASR-NFNITV 503
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ ++ D + D SE NL+
Sbjct: 504 LAEELIFRYLPDELSDRKRIYDEEMSELSNLT 535
>gi|119622251|gb|EAX01846.1| LON peptidase N-terminal domain and ring finger 2, isoform CRA_a
[Homo sapiens]
Length = 463
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 154 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVL 213
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D SE NL+
Sbjct: 214 AEELIFRYLPDELSDRKRIYDEEMSELSNLT 244
>gi|119622253|gb|EAX01848.1| LON peptidase N-terminal domain and ring finger 2, isoform CRA_c
[Homo sapiens]
Length = 501
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 192 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVL 251
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D SE NL+
Sbjct: 252 AEELIFRYLPDELSDRKRIYDEEMSELSNLT 282
>gi|432864277|ref|XP_004070261.1| PREDICTED: tripartite motif-containing protein 47-like [Oryzias
latipes]
Length = 527
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 20 NDLL-CPICFELIREAHITRCGHTFCFSCI----SKCVELQIKCPKCSASLPDMNSVFPN 74
+DLL C IC +L+ E T CGH+FC CI S E CP+C + ++ N
Sbjct: 5 SDLLDCSICLQLLEEPVTTICGHSFCRQCIERFWSSKAEGSSSCPQCRRTFRSRPALQKN 64
Query: 75 FLLNELVQKHKIKSA---QDSDG 94
+L LV+ ++ ++A +D DG
Sbjct: 65 IVLVGLVEDYRRRTAAADEDDDG 87
>gi|323507851|emb|CBQ67722.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 635
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 14 QHSPPDNDLLCPICFELIREAHITRCGHT-FCFSCI-SKCVELQIKCPKCSASLPDMNSV 71
Q +P D L CP+C +L+R+A +T C T +C CI + +E + C +C + D+ +
Sbjct: 318 QSAPTDTSLACPLCSKLLRDAVVTPCCKTKYCEECIQTHLLEHEFTCAECDKRIADLEQL 377
Query: 72 FPNFLLNELVQKHKIKSAQDSD 93
P+ + V+++ ++ + S+
Sbjct: 378 QPDQETRKKVKEYVKETIEQSE 399
>gi|297266625|ref|XP_001104504.2| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2-like [Macaca mulatta]
Length = 696
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF---- 75
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF
Sbjct: 387 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASR-NFNITV 445
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ ++ D + D SE NL+
Sbjct: 446 LAEELIFRYLPDELSDRKRIYDEEMSELSNLT 477
>gi|301610079|ref|XP_002934588.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Xenopus (Silurana) tropicalis]
Length = 675
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+DL C +C L+ E T CGHT+C C+ +C++ KCP C L
Sbjct: 378 SDLDCSLCMRLLYEPVTTPCGHTYCLKCLERCLDHNPKCPLCKEDL 423
>gi|326666190|ref|XP_003198208.1| PREDICTED: tripartite motif-containing protein 16 isoform 1
[Danio rerio]
Length = 548
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
++ LCP+C +L+++ CGH++C SCI+ ++ CP+C + ++ N
Sbjct: 9 DEFLCPVCLDLLKDLVAIHCGHSYCKSCITDFWNMEDEKGIYSCPQCRQTFSPRPALAKN 68
Query: 75 FLLNELVQKHK 85
+L E+V K K
Sbjct: 69 TMLAEVVDKLK 79
>gi|161611914|gb|AAI55662.1| Zgc:172347 protein [Danio rerio]
Length = 312
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
N +CP+C +L+++ CGH++C SCI+ C + CP C S ++ N
Sbjct: 11 NQFMCPVCLDLLQDPVTIPCGHSYCMSCITDCWNQEEQKRIYSCPLCKQSFTPRPALAKN 70
Query: 75 FLLNELVQK 83
+ E+++K
Sbjct: 71 VVFAEMLEK 79
>gi|326665409|ref|XP_003198034.1| PREDICTED: tripartite motif-containing protein 16 [Danio rerio]
Length = 559
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNF 75
+ C +C +L+++ T CGH +C SCI+ C + CP+C + ++ N
Sbjct: 12 EFSCAVCLDLLKDPVSTACGHNYCMSCITNCWNQEDQKRVYSCPQCRQTFSPRPALAKNT 71
Query: 76 LLNELVQK 83
+L E+V+K
Sbjct: 72 MLAEMVEK 79
>gi|348514299|ref|XP_003444678.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Oreochromis
niloticus]
Length = 998
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCI-SKCVELQIKCPKCSASL 65
L CP C +++A +T+C H FCF C+ ++ Q KCPKC+A+
Sbjct: 943 LTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAF 987
>gi|242793561|ref|XP_002482189.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218718777|gb|EED18197.1| SNF2 family helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 938
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSV 71
C +C + + + IT C H F SCI + +E Q KCP C A L D ++
Sbjct: 684 CAVCLDNLSQPVITACAHAFDRSCIEQVIERQHKCPLCRAELKDTGAL 731
>gi|47938645|gb|AAH72332.1| LOC432253 protein, partial [Xenopus laevis]
Length = 598
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISK--CVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ C IC + + + CGHTFC +CI+ CP+C A P N + P++ L
Sbjct: 52 DITCSICLDDLTDPVYITCGHTFCRNCITTHWGTSQGYLCPECRAVCP-RNQIVPDYRLG 110
Query: 79 ELVQKHKIKSAQDSDGLRD-FVASESQN---LSLPDVN 112
L+ K K + + SD +++ A+E + L DVN
Sbjct: 111 NLISKIK-QGIKKSDAMQENLTAAEPDHPIQLVWTDVN 147
>gi|408397923|gb|EKJ77060.1| hypothetical protein FPSE_02704 [Fusarium pseudograminearum CS3096]
Length = 365
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 1 MSATSTPSRSLKRQHSPPDNDLL---------CPICFELIREAHITRCGHTFCFSCISKC 51
+AT TP+ ++ R DN + C +C E +++ T+CGH FC+ CI
Sbjct: 281 FAATHTPAATVPRLQLTGDNTMGYIKGGQQRKCTLCLEEMKDPSATQCGHVFCWECIGDW 340
Query: 52 VELQIKCPKC 61
V + +CP C
Sbjct: 341 VREKPECPLC 350
>gi|326666188|ref|XP_695550.5| PREDICTED: tripartite motif-containing protein 16 isoform 2
[Danio rerio]
Length = 539
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
++ LCP+C +L+++ CGH++C SCI+ ++ CP+C + ++ N
Sbjct: 9 DEFLCPVCLDLLKDLVAIHCGHSYCKSCITDFWNMEDEKGIYSCPQCRQTFSPRPALAKN 68
Query: 75 FLLNELVQKHK 85
+L E+V K K
Sbjct: 69 TMLAEVVDKLK 79
>gi|307167420|gb|EFN61005.1| LON peptidase N-terminal domain and RING finger protein 3
[Camponotus floridanus]
Length = 555
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
+L C +C L+ + T CGHT+C+ C+ +C++ CP C SL D
Sbjct: 219 ELDCILCCRLLWKPVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLAD 265
>gi|229367412|gb|ACQ58686.1| E3 ubiquitin-protein ligase RAD18 [Anoplopoma fimbria]
Length = 382
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L CPICF+ + + +T+C H FC CI K +++CP C+ + + + N LL++LV
Sbjct: 23 LRCPICFDFLNISMMTKCSHNFCSLCIRKFFCFKLQCPVCNTQATEQD-LGTNRLLDDLV 81
>gi|34534021|dbj|BAC86883.1| unnamed protein product [Homo sapiens]
gi|75516681|gb|AAI01663.1| LON peptidase N-terminal domain and ring finger 2 [Homo sapiens]
gi|75516967|gb|AAI01665.1| LON peptidase N-terminal domain and ring finger 2 [Homo sapiens]
Length = 511
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 202 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVL 261
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D SE NL+
Sbjct: 262 AEELIFRYLPDELSDRKRIYDEEMSELSNLT 292
>gi|332235401|ref|XP_003266892.1| PREDICTED: tripartite motif-containing protein 69 isoform 1
[Nomascus leucogenys]
Length = 500
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPKCSASLPDMNSVFPNFLL 77
+L CP+C + R+ + CGH FC +CI LQ K CP+C N F N +L
Sbjct: 38 ELHCPLCNDWFRDPLMLSCGHNFCQACIQDFWRLQTKETFCPECKMLCQYSNCTF-NLVL 96
Query: 78 NELVQKHK 85
++LV+K K
Sbjct: 97 DKLVEKIK 104
>gi|255647385|gb|ACU24158.1| unknown [Glycine max]
Length = 206
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
CPIC + E TRCGH FC +CI + Q KCP C
Sbjct: 151 CPICMSPLVEEMSTRCGHIFCKNCIRAAIFAQAKCPTC 188
>gi|225433465|ref|XP_002263351.1| PREDICTED: uncharacterized protein LOC100262402 [Vitis vinifera]
gi|298205213|emb|CBI17272.3| unnamed protein product [Vitis vinifera]
Length = 220
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
SP CPIC + + E T+CGH FC CI + + +CP C L
Sbjct: 157 SPETPTFTCPICMDQLTEETSTKCGHIFCKECIEGAMAVSQRCPTCRKKL 206
>gi|209734594|gb|ACI68166.1| Tripartite motif-containing protein 25 [Salmo salar]
Length = 239
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVFPN 74
+ C +C +L++E T CGH++C SCI C + + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVTTACGHSYCRSCIEDCWDQDVLKGVYSCPQCRETFTPRPNLRKN 70
Query: 75 FLLNELVQK 83
+L E+V+K
Sbjct: 71 NMLAEMVEK 79
>gi|390341951|ref|XP_797688.3| PREDICTED: E3 ubiquitin-protein ligase Bre1-like
[Strongylocentrotus purpuratus]
Length = 1000
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 9 RSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCPKCSASL 65
RSLK Q L CP C + ++ +T+C H FCF+CI E Q KCPKC+A
Sbjct: 939 RSLKEQ-------LTCPCCKKGRKDVVLTKCFHVFCFNCIKTRYETRQRKCPKCNAGF 989
>gi|291230816|ref|XP_002735361.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 537
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVE----LQIKCPKCSA--SLPD-MNSV 71
DN L+C +C E R A I C H+FC CI K V+ I CP C LP+ SV
Sbjct: 14 DNFLVCTVCSERYRNAKILPCLHSFCEQCIDKLVQKSGGKNIPCPVCRRIHDLPEGAGSV 73
Query: 72 FPNFLLNELV 81
N LNELV
Sbjct: 74 QSNVFLNELV 83
>gi|294866799|ref|XP_002764849.1| rnf5, putative [Perkinsus marinus ATCC 50983]
gi|239864634|gb|EEQ97566.1| rnf5, putative [Perkinsus marinus ATCC 50983]
Length = 84
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
C ICF+ E +TRCGH FC+SC+ + ++ +CP C A +
Sbjct: 41 CNICFDQASEPVVTRCGHLFCWSCLDQWLDRSGECPVCKAGV 82
>gi|47216793|emb|CAG10115.1| unnamed protein product [Tetraodon nigroviridis]
Length = 299
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+D CP+C L E T CGHTFC +C+ + ++ ++CP C L + P L
Sbjct: 5 SDFECPLCIRLFFEPVTTPCGHTFCKNCMERSLDHNLRCPLCKQPLQEYLKNRKYHPTVL 64
Query: 77 LNELV 81
L +++
Sbjct: 65 LQDIM 69
>gi|410913859|ref|XP_003970406.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Takifugu rubripes]
Length = 1016
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCI-SKCVELQIKCPKCSASL 65
L CP C +++A +T+C H FCF C+ ++ Q KCPKC+A+
Sbjct: 961 LTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAF 1005
>gi|371874078|ref|NP_001243104.1| E3 ubiquitin-protein ligase BRE1A [Danio rerio]
Length = 1013
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCI-SKCVELQIKCPKCSASL 65
L CP C +++A +T+C H FCF C+ ++ Q KCPKC+A+
Sbjct: 958 LTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAF 1002
>gi|355751526|gb|EHH55781.1| hypothetical protein EGM_05050 [Macaca fascicularis]
Length = 511
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 202 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVL 261
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D SE NL+
Sbjct: 262 AEELIFRYLPDELSDRKRIYDEEMSELSNLT 292
>gi|326529845|dbj|BAK08202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
CP CF+ + +A T CGH FC I ++ Q +CP C +L MNS +L
Sbjct: 196 CPFCFDELVDASSTNCGHIFCLEYIKTSIQAQNRCPACWRAL-TMNSFHRVYL 247
>gi|281337620|gb|EFB13204.1| hypothetical protein PANDA_007847 [Ailuropoda melanoleuca]
Length = 605
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 296 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKEKLSELLASRNFNITIL 355
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D +E NL+
Sbjct: 356 AEELIFRYLSDELSDRKRIYDEEMTELSNLT 386
>gi|417398990|gb|JAA46528.1| Putative e3 ubiquitin ligase integral peroxisomal membrane protein
[Desmodus rotundus]
Length = 326
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 10 SLKRQHS---PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLP 66
S +R H+ LC +C E R + T CGH FC+ CI++ + + +CP C P
Sbjct: 256 SYRRSHTEEKAASRSSLCTLCLEERRHSTATPCGHLFCWECITQWCDTKTECPLCRDKFP 315
Query: 67 DMNSVF 72
V+
Sbjct: 316 PQKLVY 321
>gi|397310708|gb|AFO38364.1| TRIM5 alpha [Ovis aries]
Length = 509
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-------KCPKCSASLPDMNSVFP 73
++ CPIC EL+ E CGH+FC +CI+ E I CP C S N + P
Sbjct: 12 EVTCPICLELLTEPQSLDCGHSFCQACITANNEESIIGQEGKKSCPVCRVSFEPGN-LRP 70
Query: 74 NFLLNELVQK-HKIKSAQDSDGLRDFVASESQNLSL 108
N + +VQ+ ++K + + + R+ A + L L
Sbjct: 71 NRHVANIVQRLREVKVSPEVEQERNLCAHHGEKLQL 106
>gi|340714815|ref|XP_003395919.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like isoform 1 [Bombus terrestris]
gi|340714817|ref|XP_003395920.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like isoform 2 [Bombus terrestris]
Length = 724
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
+L C +C L+ + T CGHT+C+ C+ +C++ CP C SL D
Sbjct: 390 ELDCILCCRLLWKPVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLVD 436
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
+ CP+C ++ + T CGHT+C CVE C C + ++ N L+
Sbjct: 95 ETSFACPLCEGILCQPVTTNCGHTYC----KNCVEPGKSCRVCGQKIVAVSET--NVLVQ 148
Query: 79 ELVQKHKIKSAQDS 92
LV+K + A+ S
Sbjct: 149 RLVEKWWPREAEAS 162
>gi|255982787|emb|CAP08943.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 551
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-----CPKCSASLPDMNSVFPN 74
+ C +C +L++E + CGH++C SCI C + + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVVIPCGHSYCRSCIEGCWDQDVLKRVYCCPQCRETFTPRPTLRKN 70
Query: 75 FLLNELVQK 83
+L ELV+K
Sbjct: 71 NMLAELVEK 79
>gi|355565937|gb|EHH22366.1| hypothetical protein EGK_05611 [Macaca mulatta]
Length = 511
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 202 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVL 261
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D SE NL+
Sbjct: 262 AEELIFRYLPDELSDRKRIYDEEMSELSNLT 292
>gi|453081216|gb|EMF09265.1| DNA repair protein rad18 [Mycosphaerella populorum SO2202]
Length = 567
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P +N L C IC E IT C HTFC CI + KCP C AS + + N+
Sbjct: 22 APLENALHCQICKEFYDTPMITSCNHTFCSRCIRTSLSADGKCPACRAS-DQASKLRNNW 80
Query: 76 LLNELV 81
+ E+V
Sbjct: 81 AIQEVV 86
>gi|350415011|ref|XP_003490502.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
3-like [Bombus impatiens]
Length = 724
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
+L C +C L+ + T CGHT+C+ C+ +C++ CP C SL D
Sbjct: 390 ELDCILCCRLLWKPVTTPCGHTYCWMCLDRCLDYSSACPLCVTSLVD 436
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
+ CP+C ++ + T CGHT+C CVE C C + ++ N L+
Sbjct: 95 ETSFACPLCEGILCQPVTTNCGHTYC----KNCVEPGKSCRVCGQKIVAVSET--NVLVQ 148
Query: 79 ELVQKHKIKSAQDS 92
LV+K + A+ S
Sbjct: 149 RLVEKWWPREAEAS 162
>gi|332813942|ref|XP_003309201.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 isoform 1 [Pan troglodytes]
gi|397489596|ref|XP_003815810.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 isoform 1 [Pan paniscus]
gi|397489598|ref|XP_003815811.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 isoform 2 [Pan paniscus]
gi|410035485|ref|XP_003949915.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 isoform 2 [Pan troglodytes]
Length = 511
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 202 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVL 261
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D SE NL+
Sbjct: 262 AEELIFRYLPDELSDRKRIYDEEMSELSNLT 292
>gi|332020837|gb|EGI61235.1| Breast cancer type 1 susceptibility protein-like protein
[Acromyrmex echinatior]
Length = 1858
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-CPKCSASLPDMN 69
L C IC E + E TRCGH+FC C+ K ++++ CP C SL N
Sbjct: 24 LECTICLEFLTEPTKTRCGHSFCKICVGKVLQMKDACCPLCKKSLNRRN 72
>gi|332017135|gb|EGI57934.1| Uncharacterized RING finger protein C548.05c [Acromyrmex
echinatior]
Length = 207
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 22 LLCPICFELIR---EAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
L CPICFE + + + TRCGH FC C+ ++ KCP C ++
Sbjct: 151 LTCPICFEALSSKLKPYTTRCGHLFCLECLQTFLQTAKKCPTCKTTI 197
>gi|281204306|gb|EFA78502.1| hypothetical protein PPL_09154 [Polysphondylium pallidum PN500]
Length = 268
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKCSASL 65
+N C ICF+ + E +T+CGH FC+SCI + ++ +CP C A +
Sbjct: 95 NNQFECNICFDDVSEPVVTQCGHLFCWSCIFQWLQYNASQQCPVCKAPV 143
>gi|145510326|ref|XP_001441096.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408335|emb|CAK73699.1| unnamed protein product [Paramecium tetraurelia]
Length = 402
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD-MNSVFPNFLLNELVQ 82
CP C L E CGHTFC CI + V L+ +CP+C + + +N++ NFL+ +V+
Sbjct: 50 CPSCQLLFEEPITIVCGHTFCRECIIRSVNLKPQCPECLYPITNIINNIQENFLVKSVVK 109
Query: 83 K 83
+
Sbjct: 110 E 110
>gi|401884538|gb|EJT48693.1| mRNA polyadenylation-related protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 563
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 12 KRQHSPPDNDLLCPICFELIREAHITRCGHT-FCFSCI-SKCVELQIKCPKCSASLPDMN 69
K S D +L C +C + +REA T C T FC CI + V+ +CP+C + + ++
Sbjct: 286 KGDESTLDAELTCALCKKALREATRTPCCDTAFCEECIQTYLVDHDFECPQCESKITSLD 345
Query: 70 SVFPNFLLNELVQKHK---------------IKSAQDSDGLR--DFVASESQNLSLPDVN 112
+ P+ L + VQ ++ + DG + + A+E L LPD+N
Sbjct: 346 KLQPDQDLRDRVQAYQDGQKEGKEAEEEVKKEGEEGEGDGAQKDEEGATEENPLKLPDMN 405
Query: 113 LMLEVL 118
M E L
Sbjct: 406 TMQERL 411
>gi|452978178|gb|EME77942.1| hypothetical protein MYCFIDRAFT_179399 [Pseudocercospora fijiensis
CIRAD86]
Length = 423
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
CP+C E ++A T C HTFC+ CI + CP C A L
Sbjct: 299 CPVCMEDTKQATSTACNHTFCWECIGGWAQTHDTCPMCRAKL 340
>gi|429862170|gb|ELA36829.1| snf2 family helicase [Colletotrichum gloeosporioides Nara gc5]
Length = 874
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
C +C + + IT C H FC CI+K ++ Q KCP C L + + + P
Sbjct: 669 CAVCLDTLDSPVITHCKHVFCRGCITKVIQTQHKCPMCRNQLEEDSLLEP 718
>gi|384484298|gb|EIE76478.1| hypothetical protein RO3G_01182 [Rhizopus delemar RA 99-880]
Length = 279
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 19 DNDLLCPICFELIREAH-ITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLL 77
D L CPIC EL A I+ C H+FC C+ +C+ + CPKC NS+ N+ L
Sbjct: 20 DEHLRCPICKELFTTAMMISTCSHSFCALCVHRCLSEEQLCPKCRKEAFS-NSIVHNYDL 78
Query: 78 NELVQKHKIKS 88
+ +V ++ S
Sbjct: 79 DNVVHIWRLSS 89
>gi|410966122|ref|XP_003989585.1| PREDICTED: peroxisome biogenesis factor 10 [Felis catus]
Length = 345
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
LC +C E R + T CGH FC+ CI++ + + +CP C P V+
Sbjct: 291 LCTLCLEERRHSTATPCGHLFCWECITQWCDTKTECPLCREKFPPQKLVY 340
>gi|432943399|ref|XP_004083195.1| PREDICTED: E3 ubiquitin-protein ligase TRIM39-like [Oryzias
latipes]
Length = 577
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVE--LQIKCPKCSASLPDMNSVFPNFL 76
+ LLC IC ++ +E TRCGH +C SCI++ + QI+CP C P FL
Sbjct: 10 EEQLLCSICHDVFKEPVSTRCGHNYCKSCITEYWDSSCQIQCPLCRTKF----HTRPKFL 65
Query: 77 LN 78
+N
Sbjct: 66 VN 67
>gi|358342258|dbj|GAA49764.1| E3 ubiquitin-protein ligase RBBP6 [Clonorchis sinensis]
Length = 1809
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 24/100 (24%)
Query: 18 PDNDLLCPICFELIREAHITR-CGHTFCFSCI-SKCVELQI----KCPKCSASLPDM-NS 70
P +CP+C ++ R+A + CG T+C CI + Q+ KCP C A L D +S
Sbjct: 965 PPKQFICPLCNDMFRDAVLVSCCGTTYCNECILGHVFDSQVLGSHKCPNCGAVLTDHESS 1024
Query: 71 VFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPD 110
VF N L+ ++ RD++A+E+ +LPD
Sbjct: 1025 VFENALVRSMI--------------RDWLANEA---ALPD 1047
>gi|45184872|ref|NP_982590.1| AAR049Cp [Ashbya gossypii ATCC 10895]
gi|74695775|sp|Q75EN0.1|RAD18_ASHGO RecName: Full=Postreplication repair E3 ubiquitin-protein ligase
RAD18
gi|44980481|gb|AAS50414.1| AAR049Cp [Ashbya gossypii ATCC 10895]
gi|374105789|gb|AEY94700.1| FAAR049Cp [Ashbya gossypii FDAG1]
Length = 443
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ L C IC ++++ +T+CGHTFC CI + + + +CP C A L N + FL+
Sbjct: 27 DSLLRCHICKDMLQTPVLTQCGHTFCSLCIREYLNKESRCPLCLAEL-RQNMLQKEFLVG 85
Query: 79 ELV 81
EL
Sbjct: 86 ELA 88
>gi|308802161|ref|XP_003078394.1| COP1-like protein (ISS) [Ostreococcus tauri]
gi|116056846|emb|CAL53135.1| COP1-like protein (ISS) [Ostreococcus tauri]
Length = 635
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 5 STPS-RSLKRQHSPPDNDLLCPICFELIREAH-ITRCGHTFCFSC--------ISKCVEL 54
+TPS R + +H + CPIC + +AH + CGHTFC +C S E
Sbjct: 38 ATPSTRGARGRHDAVRTLVTCPICLDPFSDAHCVATCGHTFCHACARATLDASASGGGER 97
Query: 55 QIKCPKCSASLPDMNSVFPNFLLNELV 81
CP C + + + PN +N +V
Sbjct: 98 MAACPTCGSRFTN-EQLVPNAAVNGMV 123
>gi|89272775|emb|CAJ83567.1| Novel protein containing guanylate-binding protein, N-terminal
domain [Xenopus (Silurana) tropicalis]
Length = 611
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ----IKCPKCSASLPDMNSVFPNFL 76
D+ C IC + + + CGHTFC CI+ CP+C AS P N + P++
Sbjct: 63 DITCSICLDDLTDPVYIACGHTFCRGCITTHWGTPHPHGYLCPECRASCP-RNHIVPDYR 121
Query: 77 LNELVQKHKIKSAQDSDGLRD 97
L LV K K + Q+ + +++
Sbjct: 122 LGNLVSKIK-QGIQERNAMQE 141
>gi|195484918|ref|XP_002090876.1| GE13346 [Drosophila yakuba]
gi|194176977|gb|EDW90588.1| GE13346 [Drosophila yakuba]
Length = 230
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIR--EAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
P++ + P++ CPIC E +R + T CGH FCF CI + KCP C+ +
Sbjct: 160 PAKRRCTELGDPEDPYRCPICMEYVRRRQPAATTCGHVFCFKCIKTAICQFQKCPMCNRN 219
Query: 65 LPD 67
L D
Sbjct: 220 LTD 222
>gi|62751431|ref|NP_001015868.1| ring finger protein 112 [Xenopus (Silurana) tropicalis]
gi|59861904|gb|AAH90385.1| ring finger protein 112 [Xenopus (Silurana) tropicalis]
Length = 610
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ----IKCPKCSASLPDMNSVFPNFL 76
D+ C IC + + + CGHTFC CI+ CP+C AS P N + P++
Sbjct: 62 DITCSICLDDLTDPVYIACGHTFCRGCITTHWGTPHPHGYLCPECRASCP-RNHIVPDYR 120
Query: 77 LNELVQKHKIKSAQDSDGLRD 97
L LV K K + Q+ + +++
Sbjct: 121 LGNLVSKIK-QGIQERNAMQE 140
>gi|431898169|gb|ELK06864.1| E3 ubiquitin-protein ligase TRIM50 [Pteropus alecto]
Length = 487
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ RE + +CGH++C C +S ++ +++CP C + D +S PN
Sbjct: 11 EDRLQCPICLEVFREPLMLQCGHSYCKGCLVSLSHHLDSELRCPVCRQEV-DGSSSPPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLARVIE 76
>gi|326665111|ref|XP_003197971.1| PREDICTED: tripartite motif-containing protein 16 [Danio rerio]
gi|159155527|gb|AAI54554.1| Si:ch211-220f13.2 protein [Danio rerio]
Length = 546
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIK-----CPKCSASLPDMNSVFPNFLLN 78
C IC +L++++ CGH++C SCIS C + + CP+C S ++ N +L
Sbjct: 15 CSICLDLLKDSVAIPCGHSYCMSCISDCWDQDERKGVYSCPQCRQSFTPRPALGKNTMLT 74
Query: 79 ELVQKHKIKSAQDSD 93
E+++ + + Q D
Sbjct: 75 EVMENIRKRKLQAGD 89
>gi|19075245|ref|NP_587745.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74638645|sp|Q9P3U8.1|YJ95_SCHPO RecName: Full=Uncharacterized RING finger protein C548.05c
gi|8670896|emb|CAB94947.1| ubiquitin-protein ligase E3 (predicted) [Schizosaccharomyces pombe]
Length = 468
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L CPIC E ++ T CGHT+C+ C+ ++ CP C L S P +L+ E++
Sbjct: 83 LECPICTEALQRPFTTHCGHTYCYECLLNWLKESKSCPTCRQKLYTQPS--PAYLVYEIM 140
>gi|390177948|ref|XP_001358564.3| GA10686 [Drosophila pseudoobscura pseudoobscura]
gi|388859265|gb|EAL27705.3| GA10686 [Drosophila pseudoobscura pseudoobscura]
Length = 326
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFE--LIREAHITRCGHTFCFSCISKCVELQIKCP 59
S S P R Q+ CP+C + L RE T+CGH FC CI + KCP
Sbjct: 251 SDVSPPKRKRNDQNQSSGEGYKCPVCLDCLLQREPSSTKCGHVFCRQCIESAIRATHKCP 310
Query: 60 KCSASL 65
C+ L
Sbjct: 311 MCNKKL 316
>gi|157114700|ref|XP_001652378.1| hypothetical protein AaeL_AAEL001115 [Aedes aegypti]
gi|108883531|gb|EAT47756.1| AAEL001115-PA [Aedes aegypti]
Length = 209
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 8 SRSLKRQHSPPDNDLLCPICFELI--REAHITRCGHTFCFSCISKCVELQIKCPKC 61
S L SP + CPICFE + R+A T CGH FC +CI+ + ++ KCP C
Sbjct: 139 SEQLAGSSSPTPASVNCPICFESVYRRQAASTICGHLFCNACITAEMRIRKKCPLC 194
>gi|50540516|ref|NP_001002723.1| uncharacterized protein LOC436996 [Danio rerio]
gi|49900576|gb|AAH76089.1| Zgc:92594 [Danio rerio]
Length = 436
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI----SKCVELQIKCPKCSASLPDMNSVFPN 74
+ +L CP+C +L R+ H+ CGH FC C+ + +++CP+C + + N
Sbjct: 12 EEELTCPVCLDLYRDPHLLPCGHNFCLQCLRRLKGRSERGRLRCPECRQTHRCAAAWQKN 71
Query: 75 FLLNELVQKHKIKS 88
F L + + +S
Sbjct: 72 FKLANITDGFRRRS 85
>gi|47215543|emb|CAG06273.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1038
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCI-SKCVELQIKCPKCSASL 65
L CP C +++A +T+C H FCF C+ ++ Q KCPKC+A+
Sbjct: 983 LTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAF 1027
>gi|367034914|ref|XP_003666739.1| hypothetical protein MYCTH_2311696 [Myceliophthora thermophila ATCC
42464]
gi|347014012|gb|AEO61494.1| hypothetical protein MYCTH_2311696 [Myceliophthora thermophila ATCC
42464]
Length = 477
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
P D LLCP+C T CGHTFC CI++ +E Q CP
Sbjct: 59 PVDETLLCPVCKTPFYSPITTPCGHTFCAGCINRALETQPTCP 101
>gi|345804721|ref|XP_540474.3| PREDICTED: RING finger protein 213 isoform 1 [Canis lupus familiaris]
Length = 4526
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 8 SRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCPKCSASLP 66
S++L R P CP+C +E CGH FC CI+ C+ L Q+ CP C LP
Sbjct: 3311 SKTLSRFEIQP-----CPVCLGDAQEPVSLPCGHVFCLRCINTCITLGQMACPYCLTDLP 3365
Query: 67 DMNSVFPNFLLNELVQKH 84
S+ N + ++KH
Sbjct: 3366 KDFSLTVNQEHRDAIRKH 3383
>gi|301767630|ref|XP_002919232.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2-like [Ailuropoda melanoleuca]
Length = 746
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFLL 77
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 438 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKEKLSELLASRNFNITILA 497
Query: 78 NELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D +E NL+
Sbjct: 498 EELIFRYLSDELSDRKRIYDEEMTELSNLT 527
>gi|126337469|ref|XP_001375610.1| PREDICTED: probable E3 ubiquitin-protein ligase TRIML1-like
[Monodelphis domestica]
Length = 468
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE---LQIKCPKCSASLPDMNSVFPNFLL 77
DL C IC + I +CGH FC C+ +C E KCP+C + D + V PN L
Sbjct: 13 DLTCSICLGYFTDPVIVKCGHNFCRVCLLRCREEADAAFKCPECRGVIED-SDVVPNRKL 71
Query: 78 NELVQKHK 85
L K
Sbjct: 72 ENLSMTGK 79
>gi|65285121|ref|NP_944606.2| tripartite motif-containing protein 73 [Homo sapiens]
gi|56404880|sp|Q86UV7.1|TRI73_HUMAN RecName: Full=Tripartite motif-containing protein 73; AltName:
Full=Tripartite motif-containing protein 50B
gi|30315005|gb|AAP30735.1| tripartite motif protein TRIM50B [Homo sapiens]
gi|157170278|gb|AAI52801.1| Tripartite motif-containing 73 [synthetic construct]
gi|162317766|gb|AAI56767.1| Tripartite motif-containing 73 [synthetic construct]
gi|261860870|dbj|BAI46957.1| tripartite motif-containing protein 73 [synthetic construct]
Length = 250
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E+ + +CGH++C C +S ++ +++CP C + D +S PN
Sbjct: 11 EDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMC-WQVVDGSSSLPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLAWVIE 76
>gi|389744462|gb|EIM85645.1| hypothetical protein STEHIDRAFT_158274 [Stereum hirsutum FP-91666
SS1]
Length = 1207
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
CPICF ++ + IT C H FC CI++ + KCP
Sbjct: 819 CPICFGILDDPRITSCAHRFCLPCITEVISRDPKCP 854
>gi|301622630|ref|XP_002940628.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B [Xenopus (Silurana)
tropicalis]
Length = 991
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPKCSASLP--DMNSVFPN 74
L CP C ++A +T+C H FCF C+ E Q KCPKC+A+ D + ++ N
Sbjct: 936 LTCPCCNTRKKDAVLTKCFHVFCFECVKTRYESRQRKCPKCNAAFGAHDFHRIYIN 991
>gi|302693563|ref|XP_003036460.1| hypothetical protein SCHCODRAFT_62971 [Schizophyllum commune H4-8]
gi|300110157|gb|EFJ01558.1| hypothetical protein SCHCODRAFT_62971 [Schizophyllum commune H4-8]
Length = 496
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
++L C ICF+L E T C HTFC C+ + ++ CP C LP S F + +N+
Sbjct: 185 SELTCEICFQLFYEPITTPCQHTFCTKCLQRSLDHSAACPICRQELPGY-SYFQDHPVNQ 243
Query: 80 LV 81
V
Sbjct: 244 TV 245
>gi|326664639|ref|XP_697132.3| PREDICTED: tripartite motif-containing protein 16-like [Danio
rerio]
Length = 561
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCV---ELQ----IKCPKCSASLPDMNSVFPNFL 76
CP+C +++++ CGH++C SCI+ C EL+ CP+C + ++F N +
Sbjct: 13 CPVCLDVMKDPVTIPCGHSYCMSCITDCWNQEELKNTEIYSCPQCRHTFSPRPALFKNIV 72
Query: 77 LNELVQK 83
E+++K
Sbjct: 73 FAEMMEK 79
>gi|291244525|ref|XP_002742146.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 690
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIK----CPKCSASLPD-MNSVFPNFL 76
L C IC E E I C HTFC C+ + E Q + CP CS + + ++++ NF
Sbjct: 23 LYCAICLERYSEPKILPCHHTFCKKCLVQLTEKQAQMLLICPTCSKPIKEPISNLQSNFF 82
Query: 77 LNELVQK 83
+N L+ K
Sbjct: 83 MNSLLDK 89
>gi|407971937|gb|AFU52971.1| tumor necrosis factor receptor-associated factor 6 [Mizuhopecten
yessoensis]
Length = 657
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCV---ELQIKCPKCSASLPDMNSVFP 73
P ++ CPIC ++RE + T CGH FC +CI + + E + +CP +A L + +FP
Sbjct: 88 PREDKYDCPICLLVLREPYQTECGHRFCQNCIKRWLRETESEPRCPVDNAPLGE-GQIFP 146
Query: 74 -NFLLNELV 81
NF E++
Sbjct: 147 DNFAKREIL 155
>gi|386767888|ref|NP_001246302.1| CG43058 [Drosophila melanogaster]
gi|383302457|gb|AFH08056.1| CG43058 [Drosophila melanogaster]
Length = 100
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIR--EAHITRCGHTFCFSCISKCVELQIKCP 59
S P + L+ D +CPIC E +R + T CGH FC+ CI K + KCP
Sbjct: 25 SPQKQPVKRLRSDLGDSDEPYMCPICMENVRRRQPAATPCGHVFCYDCIQKAIGDYKKCP 84
Query: 60 KCSASL 65
C+ +
Sbjct: 85 MCNKKI 90
>gi|301133554|gb|ADK63399.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 227
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 3 ATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI---KCP 59
+TST S S + PD+D C ICFEL ++ +T CGH FC+ C+ + + +CP
Sbjct: 6 STST-SYSDTNGSNEPDHDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECP 64
Query: 60 KCSASLPD 67
C A + D
Sbjct: 65 VCKALVQD 72
>gi|297696528|ref|XP_002825441.1| PREDICTED: uncharacterized protein LOC100443333 [Pongo abelii]
Length = 500
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPKCSASLPDMNSVFPNFLL 77
+L CP+C + R+ + CGH FC +CI LQ K CP+C N F N +L
Sbjct: 38 ELHCPLCNDWFRDPLMLSCGHNFCQACIQDFWRLQAKETFCPECKMLCQYSNCTF-NLVL 96
Query: 78 NELVQKHK 85
++LV+K K
Sbjct: 97 DKLVEKIK 104
>gi|260792736|ref|XP_002591370.1| hypothetical protein BRAFLDRAFT_227409 [Branchiostoma floridae]
gi|229276575|gb|EEN47381.1| hypothetical protein BRAFLDRAFT_227409 [Branchiostoma floridae]
Length = 690
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKC--SASLPD--MNSVFPNF 75
L CP+C R+ + C HTFC C+ + Q ++CP C SLPD ++ + NF
Sbjct: 16 LTCPVCMLHFRDPRVLPCLHTFCRECLQEWATKQQPLECPTCRTQVSLPDQGVDGLRTNF 75
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASE 102
+N L+ +K + ASE
Sbjct: 76 YVNNLLDFAAVKEGHQIVTQENLEASE 102
>gi|118344312|ref|NP_001071979.1| zinc finger protein [Ciona intestinalis]
gi|92081506|dbj|BAE93300.1| zinc finger protein [Ciona intestinalis]
Length = 579
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
DN +CPIC +R+ T CGH FC CI +C+ + CP
Sbjct: 41 DNKYMCPICLLALRDPVQTECGHRFCHLCILRCIRSKASCP 81
>gi|432846716|ref|XP_004065909.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1-like [Oryzias latipes]
Length = 741
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+DL C +C L E T CGHTFC +C+ +C++ CP C SL + +
Sbjct: 443 SDLECSLCMRLFYEPVTTPCGHTFCKNCLERCLDHTPHCPLCKESLKEYLACRKYMVTTV 502
Query: 77 LNELVQKH 84
L L+++H
Sbjct: 503 LEVLIKQH 510
>gi|345777223|ref|XP_538457.3| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Canis lupus familiaris]
Length = 764
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 455 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKEKLSELLASRNFNITIL 514
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D +E NL+
Sbjct: 515 AEELIFRYLSDELSDRKRIYDEEMTELSNLT 545
>gi|115727664|ref|XP_001199620.1| PREDICTED: tripartite motif containing 13-like
[Strongylocentrotus purpuratus]
Length = 269
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-----CPKCSASLP---- 66
SP +L CP+C +E I C HTFC C+ +EL K CP C P
Sbjct: 3 SPFHKNLECPVCQRFFKEPKILTCSHTFCKGCLGPLLELSRKKDVLLCPTCRGETPVPGR 62
Query: 67 DMNSVFPNFLLNELVQ 82
D+ + N + LV+
Sbjct: 63 DVGRLLSNITVRSLVE 78
>gi|328855243|gb|EGG04371.1| hypothetical protein MELLADRAFT_117104 [Melampsora larici-populina
98AG31]
Length = 644
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQ-------IKCPKCS 62
L CPIC A IT+CGH FC+SC+ +EL KCP C+
Sbjct: 132 LACPICLSPTTAARITKCGHVFCYSCLLHYLELSEEKKGEGRKCPVCT 179
>gi|231291746|dbj|BAH58735.1| tripartite motif-containing 31 gamma [Homo sapiens]
Length = 262
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ +++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVR-RDAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+ KI++ Q S+
Sbjct: 72 RNLVE--KIQALQASE 85
>gi|390361970|ref|XP_003730049.1| PREDICTED: E3 ubiquitin-protein ligase TRIM31-like
[Strongylocentrotus purpuratus]
Length = 300
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISK----CVELQIKCPKCSASLP------DMNSV 71
L+CPIC ++I+ A I CGHTFC C++K + CP C A + +
Sbjct: 9 LMCPICIDIIKNATILNCGHTFCQGCLAKINYNVARRCLSCPVCRAETTCTKGRSGIEGL 68
Query: 72 FPNFLLNELVQKHKI 86
N ++N LV +++
Sbjct: 69 PRNVIINSLVADYQM 83
>gi|268575808|ref|XP_002642884.1| C. briggsae CBR-PAR-2 protein [Caenorhabditis briggsae]
Length = 549
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
+DLLCP+C L + CGH++C CI + C C + ++ P+ L+
Sbjct: 46 SDLLCPLCDHLFDRPVMVTCGHSYCEPCIERHTRNTRSCVICKHDVGPFEAMIPSITLDN 105
Query: 80 LVQKHKIKSAQDSDGLRDFVASE 102
+V+K K + +S FV+ E
Sbjct: 106 MVRKLKNEDIIESSYEESFVSEE 128
>gi|198437128|ref|XP_002129989.1| PREDICTED: similar to ring finger protein 127 isoform 2 [Ciona
intestinalis]
Length = 758
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MSATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPK 60
M+ P L+ D+DL C +C L+ + T CGH FC CI +C++ + +CP
Sbjct: 432 MALKPAPKARLQNNEELDDSDLECSLCMRLLCDPVCTPCGHMFCQGCIERCLDHKSQCPL 491
Query: 61 CSAS 64
C +
Sbjct: 492 CKKT 495
>gi|410896640|ref|XP_003961807.1| PREDICTED: zinc-binding protein A33-like [Takifugu rubripes]
Length = 463
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLNE 79
LLCPIC +L T CGH FC CI E+ +CP C L N LL+E
Sbjct: 13 LLCPICLDLFNLPISTPCGHNFCKECIQGYWEIAELPQCPVCKQKLSKGPEFKVNTLLSE 72
Query: 80 LVQKHKIKSAQ 90
L + K SA+
Sbjct: 73 LATQFKKSSAK 83
>gi|126337471|ref|XP_001375678.1| PREDICTED: probable E3 ubiquitin-protein ligase TRIML1-like
[Monodelphis domestica]
Length = 464
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE---LQIKCPKCSASLPDMNSVFPNFLL 77
DL C IC + I +CGH FC C+ +C E KCP+C + D + V PN L
Sbjct: 13 DLTCSICLGYFTDPVIVKCGHNFCRVCLLRCREEADATFKCPECRGVIEDRD-VVPNRKL 71
Query: 78 NELVQKHK 85
L K
Sbjct: 72 ENLSMTGK 79
>gi|432950546|ref|XP_004084494.1| PREDICTED: E3 ubiquitin-protein ligase TRIM39-like [Oryzias
latipes]
Length = 604
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL--QIKCPKCSASLPDMNSVFPNFL 76
D+ LC IC ++ CGHTFC SCI++ + +CP C S P + N
Sbjct: 90 DDQFLCSICLDVFTNPSSIPCGHTFCMSCITRYWDQCELFQCPLCKKSFPKRPILHVNRT 149
Query: 77 LNELVQKHK 85
L E+ ++ K
Sbjct: 150 LREITEQFK 158
>gi|209734660|gb|ACI68199.1| Tripartite motif-containing protein 25 [Salmo salar]
Length = 380
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVFPN 74
+ C +C +L++E CGH++C SCI C + + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVAIPCGHSYCRSCIEGCWDQDVLKGVYSCPQCRQTFSPRPTLSKN 70
Query: 75 FLLNELVQKHKIKSAQ 90
+L ELV+K K Q
Sbjct: 71 NMLAELVEKLKKTGLQ 86
>gi|148682600|gb|EDL14547.1| LON peptidase N-terminal domain and ring finger 2 [Mus musculus]
Length = 470
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 3 ATSTPSRSLKRQHSPPD-----NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK 57
A S P R+ P+ D C +C L+ E T CGHTFC C+ +C++
Sbjct: 148 ADSPPQRNASSLEEEPEFTIDATDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPH 207
Query: 58 CPKCSASLPDMNS 70
CP C L +++
Sbjct: 208 CPLCKDKLSEVSG 220
>gi|85567227|gb|AAI12155.1| Tripartite motif protein 50A [Homo sapiens]
gi|85567586|gb|AAI12153.1| Tripartite motif protein 50A [Homo sapiens]
gi|119590094|gb|EAW69688.1| hCG1642804, isoform CRA_b [Homo sapiens]
gi|119590097|gb|EAW69691.1| hCG1642804, isoform CRA_b [Homo sapiens]
gi|158257580|dbj|BAF84763.1| unnamed protein product [Homo sapiens]
Length = 487
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E + +CGH++C C+ ++ +++CP C ++ D +S PN
Sbjct: 11 EDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV-DGSSSLPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLARVIE 76
>gi|193652565|ref|XP_001945787.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 332
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCPKCSASLPDMNSVFPNFLLNE 79
DL+CPIC EL+ + T+C H FC CI + KCP C L + P+ ++
Sbjct: 45 DLMCPICLELLNKTMATKCLHRFCSECIVTALRAGNKKCPTCRKRLISKRCLRPDHNIDL 104
Query: 80 LVQK 83
L+ K
Sbjct: 105 LISK 108
>gi|41617082|tpg|DAA02480.1| TPA_inf: HDC06237 [Drosophila melanogaster]
Length = 177
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIR--EAHITRCGHTFCFSCISKCVELQIKCP 59
S P + L+ D +CPIC E +R + T CGH FC+ CI K + KCP
Sbjct: 25 SPQKQPVKRLRSDLGDSDEPYMCPICMENVRRRQPAATPCGHVFCYDCIQKAIGDYKKCP 84
Query: 60 KCSASL 65
C+ +
Sbjct: 85 MCNKKI 90
>gi|334346848|ref|XP_001375704.2| PREDICTED: probable E3 ubiquitin-protein ligase TRIML1-like
[Monodelphis domestica]
Length = 464
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE---LQIKCPKCSASLPDMNSVFPNFLL 77
DL C IC + I +CGH FC C+ +C E KCP+C + D + V PN L
Sbjct: 13 DLTCSICLGYFTDPVIVKCGHNFCRVCLLRCREEADATFKCPECRGVIEDRD-VVPNRKL 71
Query: 78 NELVQKHK 85
L K
Sbjct: 72 ENLSMTGK 79
>gi|21707222|gb|AAH33871.1| TRIM74 protein [Homo sapiens]
gi|123979822|gb|ABM81740.1| tripartite motif-containing 74 [synthetic construct]
gi|123994589|gb|ABM84896.1| tripartite motif-containing 74 [synthetic construct]
Length = 249
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E+ + +CGH++C C +S ++ +++CP C + D +S PN
Sbjct: 11 EDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMC-WQVVDGSSSLPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLAWVIE 76
>gi|405963091|gb|EKC28695.1| hypothetical protein CGI_10018953 [Crassostrea gigas]
Length = 538
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND+ CPIC++ + A IT CGH F +C+ K + ++ CP C L + + N +
Sbjct: 444 NDV-CPICYQPLLTAKITPCGHFFHATCLKKWLYVKDTCPMCHKKLHETSEESQNSTEDR 502
Query: 80 LVQKHKIKSAQDSDGLRDFVA---SESQNLSLPDVN 112
Q I + G D SE Q S D++
Sbjct: 503 PAQNEDIVEEDEDHGDADSEPSNHSEEQEFSEEDLD 538
>gi|198437126|ref|XP_002129971.1| PREDICTED: similar to ring finger protein 127 isoform 1 [Ciona
intestinalis]
Length = 768
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 1 MSATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPK 60
M+ P L+ D+DL C +C L+ + T CGH FC CI +C++ + +CP
Sbjct: 442 MALKPAPKARLQNNEELDDSDLECSLCMRLLCDPVCTPCGHMFCQGCIERCLDHKSQCPL 501
Query: 61 CSAS 64
C +
Sbjct: 502 CKKT 505
>gi|154335110|ref|XP_001563795.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060824|emb|CAM37840.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 712
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
+CP+C ++ +E CGH C +C +C+ + +CP C+ ++P+ P
Sbjct: 16 VCPVCLDVFKEPVCFPCGHILCRACALRCIAARPRCPLCNHAVPNPRHCVP 66
>gi|119590095|gb|EAW69689.1| hCG1642804, isoform CRA_c [Homo sapiens]
gi|219517998|gb|AAI43788.1| TRIM50 protein [Homo sapiens]
Length = 486
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E + +CGH++C C+ ++ +++CP C ++ D +S PN
Sbjct: 11 EDRLQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV-DGSSSLPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLARVIE 76
>gi|344301012|gb|EGW31324.1| hypothetical protein SPAPADRAFT_61891 [Spathaspora passalidarum
NRRL Y-27907]
Length = 369
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+ CPIC E++ CGH+FC+ CI + E ++ CP C +
Sbjct: 30 MECPICSEVMIIPVTAECGHSFCYGCIHQWFETKLNCPTCRTDI 73
>gi|156049181|ref|XP_001590557.1| hypothetical protein SS1G_08297 [Sclerotinia sclerotiorum 1980]
gi|154692696|gb|EDN92434.1| hypothetical protein SS1G_08297 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 486
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+ L C +C + IT C HTFC CI +C+ KCP C ++ ++ + PN +
Sbjct: 59 DSLLRCQVCKDFFTTPMITSCSHTFCSLCIRRCLNNDSKCPTCRSNDQEIK-LKPNAAIE 117
Query: 79 ELVQKHK 85
+LV+ K
Sbjct: 118 DLVEAFK 124
>gi|115387867|ref|XP_001211439.1| postreplication repair ubiquitin-protein ligase E3 rad18
[Aspergillus terreus NIH2624]
gi|114195523|gb|EAU37223.1| postreplication repair ubiquitin-protein ligase E3 rad18
[Aspergillus terreus NIH2624]
Length = 227
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 TPLESALRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSSEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELV 81
+ ELV
Sbjct: 81 AVQELV 86
>gi|195393728|ref|XP_002055505.1| GJ18758 [Drosophila virilis]
gi|194150015|gb|EDW65706.1| GJ18758 [Drosophila virilis]
Length = 480
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 18 PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-CPKCSASLPDMNSVFP-NF 75
PD+ C IC + + E +T CGH FC SC+S +E + CP + L +FP N+
Sbjct: 106 PDSRYECAICIDWLNEPVLTSCGHRFCKSCLSDWLENHNQCCPLDNKQLSTEQDIFPDNY 165
Query: 76 LLNELVQ-KHK 85
E+ Q KHK
Sbjct: 166 TRREIEQIKHK 176
>gi|403365353|gb|EJY82457.1| RING-finger-containing E3 ubiquitin ligase [Oxytricha trifallax]
Length = 244
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
D CPIC+ELI E +T C H FC SC ++ ++ CP C +
Sbjct: 35 DYECPICYELIAEPVVTMCKHLFCLSCQNQVLQQNKVCPMCRKAF 79
>gi|334346846|ref|XP_001375590.2| PREDICTED: probable E3 ubiquitin-protein ligase TRIML1-like
[Monodelphis domestica]
Length = 553
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE---LQIKCPKCSASLPDMNSVFPNFLL 77
DL C IC + I +CGH FC C+ +C E KCP+C + D + V PN L
Sbjct: 99 DLTCSICLGYFTDPVIVKCGHNFCRVCLLRCREEADAAFKCPECRGVIED-SDVVPNRKL 157
Query: 78 NELVQKHK 85
L K
Sbjct: 158 ENLSMTGK 165
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE---LQIKCPKCSASLPDMNSVFPNFLL 77
DL C IC + I +CGH+FC C+ +C E KCP+C + D + V PN L
Sbjct: 13 DLTCSICLGYFTDPVIVKCGHSFCRVCLLRCREEADAAFKCPECRRVIEDRD-VVPNRKL 71
Query: 78 NELVQKHK 85
L K
Sbjct: 72 ENLSMTGK 79
>gi|224065401|ref|XP_002301799.1| predicted protein [Populus trichocarpa]
gi|222843525|gb|EEE81072.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
CPIC + E T+CGH FC +CIS ++ Q KCP C
Sbjct: 154 CPICLCPLVEEMSTKCGHIFCKACISDAIKRQAKCPTC 191
>gi|148236917|ref|NP_001089432.1| tripartite motif containing 62 [Xenopus laevis]
gi|63101478|gb|AAH94484.1| Trim62 protein [Xenopus laevis]
Length = 633
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 18 PDNDL----LCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSV 71
PD DL C +C EL +E + CGH FC SCI E + CP+C + S
Sbjct: 161 PDEDLAEELTCSLCHELFKEPVLVECGHNFCKSCIENAWEARGSASCPECEEPFAE-RSF 219
Query: 72 FPNFLLNELVQK 83
N L +LV+K
Sbjct: 220 IINRTLEKLVKK 231
>gi|238502491|ref|XP_002382479.1| DNA repair protein (RadR), putative [Aspergillus flavus NRRL3357]
gi|220691289|gb|EED47637.1| DNA repair protein (RadR), putative [Aspergillus flavus NRRL3357]
Length = 429
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 TPLESALRCQVCKDFFDNPVITSCCHTFCSLCIRRCLSTEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELVQ 82
+ ELV+
Sbjct: 81 AVQELVE 87
>gi|38524612|ref|NP_942150.1| tripartite motif-containing protein 74 [Homo sapiens]
gi|56404879|sp|Q86UV6.1|TRI74_HUMAN RecName: Full=Tripartite motif-containing protein 74; AltName:
Full=Tripartite motif-containing protein 50C
gi|30315007|gb|AAP30736.1| tripartite motif protein TRIM50C [Homo sapiens]
Length = 250
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E+ + +CGH++C C +S ++ +++CP C + D +S PN
Sbjct: 11 EDWLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMC-WQVVDGSSSLPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLAWVIE 76
>gi|403340466|gb|EJY69519.1| RING-finger-containing E3 ubiquitin ligase [Oxytricha trifallax]
Length = 244
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
D CPIC+ELI E +T C H FC SC ++ ++ CP C +
Sbjct: 35 DYECPICYELIAEPVVTMCKHLFCLSCQNQVLQQNKVCPMCRKAF 79
>gi|255982807|emb|CAP08953.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 556
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C +C +L++E + CGH++C SCI C + CP+C + ++ N +L
Sbjct: 15 CSVCLDLLKEPVVIPCGHSYCRSCIEGCWDQDDLKGVYSCPQCRETFTPRPNLRKNNMLA 74
Query: 79 ELVQK 83
ELV+K
Sbjct: 75 ELVEK 79
>gi|255983005|emb|CAP08927.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 267
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVFPN 74
+ C +C +L++E CGH++C SCI C + + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVTIPCGHSYCRSCIEGCWDQDVLKGVYSCPQCRETFTPRPNLGKN 70
Query: 75 FLLNELVQKHK 85
+L ELV+K K
Sbjct: 71 NMLAELVEKLK 81
>gi|242817447|ref|XP_002486957.1| DNA repair protein (RadR), putative [Talaromyces stipitatus ATCC
10500]
gi|218713422|gb|EED12846.1| DNA repair protein (RadR), putative [Talaromyces stipitatus ATCC
10500]
Length = 414
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
+P ++ L C IC + IT C HTFC CI +C+ + KCP C A+
Sbjct: 22 APLESALRCQICKDFFNNPVITSCSHTFCSLCIRRCLSSEGKCPACRAT 70
>gi|26324458|dbj|BAC25983.1| unnamed protein product [Mus musculus]
Length = 496
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 13 RQHSPPDNDLLCPICFELIREAHIT-RCGHTFCFSCISKCVELQIKCPKC--SASLPDMN 69
R H D+ L C ICFE A I +C H +C CI K + + +CP C + + PD+
Sbjct: 12 RSHQTIDDLLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYKTQCPTCCVAVTEPDLR 71
Query: 70 SVFPNFLLNELVQ 82
+ N LL+ELV+
Sbjct: 72 N---NRLLDELVK 81
>gi|18394639|ref|NP_564060.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
gi|30685966|ref|NP_849687.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
gi|30685971|ref|NP_849688.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
gi|25082694|gb|AAN71992.1| expressed protein [Arabidopsis thaliana]
gi|30387591|gb|AAP31961.1| At1g18660 [Arabidopsis thaliana]
gi|332191620|gb|AEE29741.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
gi|332191621|gb|AEE29742.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
gi|332191622|gb|AEE29743.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
Length = 486
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 10 SLKRQHSPPD--NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL-- 65
S+++ H + +D C +C +L+ E T CGHTFC SC+ + ++ KCP C +
Sbjct: 180 SMRKTHGMAERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDRGNKCPLCRTVIFM 239
Query: 66 -PDMNSVFPNFLLNELVQKH------KIKSAQDS 92
P +V + LN +++K+ + KS QD+
Sbjct: 240 TPRTCAV--SVTLNNIIEKNFPEEYAERKSEQDT 271
>gi|402223732|gb|EJU03796.1| DWNN-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 560
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 13 RQHSPPDNDLLCPICFELIREAHITR-CGHTFCFSCI-SKCVELQIKCPKCSASLPDMNS 70
R+ D CP+C +L REA T CG T+C CI + +E CP CS + ++
Sbjct: 307 RERPVTDPTFACPVCSKLFREATRTPCCGATYCEECIQTHLLEHDFVCPSCSKRIGSLDR 366
Query: 71 VFPNFLLNELVQKHKIKSAQDS 92
+ P+ + V+++ K+ +++
Sbjct: 367 LEPDSEMRRKVKQYIYKAMEEA 388
>gi|256016429|emb|CAP08964.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 471
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-----KCPKCSASLPDMNSVFPN 74
+ C +C +L++E CGH++C SCI C + + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVTIPCGHSYCRSCIEGCWDQDVLKGVYSCPQCRETFTPRPNLRKN 70
Query: 75 FLLNELVQK 83
+L ELV+K
Sbjct: 71 NMLAELVEK 79
>gi|241029435|ref|XP_002406434.1| hypothetical protein IscW_ISCW016152 [Ixodes scapularis]
gi|215491964|gb|EEC01605.1| hypothetical protein IscW_ISCW016152 [Ixodes scapularis]
Length = 314
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
++R + +N+L C IC EL +A + +CGHTFC CI + + CP C + +S
Sbjct: 212 VRRVETIMENELTCVICSELFIDAVMLQCGHTFCAYCIQNWRKQRNCCPFCQVKI---SS 268
Query: 71 VFPNFLLNELVQK 83
V +F+++ ++++
Sbjct: 269 VTRSFVVDNVIEE 281
>gi|391871019|gb|EIT80185.1| postreplication repair protein [Aspergillus oryzae 3.042]
Length = 408
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 TPLESALRCQVCKDFFDNPVITSCCHTFCSLCIRRCLSTEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELVQ 82
+ ELV+
Sbjct: 81 AVQELVE 87
>gi|294462707|gb|ADE76898.1| unknown [Picea sitchensis]
Length = 205
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
L C IC + ++E T CGH FC CI + +E+ +CP C L M S+ ++
Sbjct: 148 LSCAICMDKMKEETTTICGHVFCKKCIVRAIEVYKQCPSCRKKLT-MKSIHRIYI 201
>gi|255982818|emb|CAP08959.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 556
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C +C +L++E + CGH++C SCI C + CP+C + ++ N +L
Sbjct: 15 CSVCLDLLKEPVVIPCGHSYCRSCIEGCWDQDDLKGVYSCPQCRETFTPRPNLRKNNMLA 74
Query: 79 ELVQK 83
ELV+K
Sbjct: 75 ELVEK 79
>gi|426244953|ref|XP_004016280.1| PREDICTED: tripartite motif-containing protein 34 [Ovis aries]
Length = 489
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI------KCPKCSASLPDMNSVFP 73
++ CPIC EL+ E CGH+FC +CI+ E I CP C A + +++P
Sbjct: 11 KEVSCPICQELLTEPLSLGCGHSFCQTCITDSKETDISLEGDSSCPVCGARY-SLGNLWP 69
Query: 74 NFLLNELVQKHKIKSAQDSDG 94
N L +V++ + +G
Sbjct: 70 NLHLANIVERLRTVKLSAEEG 90
>gi|290983525|ref|XP_002674479.1| predicted protein [Naegleria gruberi]
gi|284088069|gb|EFC41735.1| predicted protein [Naegleria gruberi]
Length = 678
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP-NFLLNE 79
+L CP+C+ + E CGHTF SCI + + KCP C ++ + +P ++NE
Sbjct: 317 ELECPLCYRVFYEPVTLSCGHTFDRSCICRVHDYSDKCPLCRQTIHVVPYDYPITVVINE 376
Query: 80 LVQKH 84
L QK+
Sbjct: 377 LCQKY 381
>gi|324504230|gb|ADY41827.1| RING finger protein nhl-1, partial [Ascaris suum]
Length = 831
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSASLP----DMNSVFPN 74
L CPIC + ++ + C HTFC C+ C ++ +KCP+C A P + S N
Sbjct: 51 LTCPICLDRYKQPKLLPCHHTFCLPCLDNCADVIHRVLKCPECRAEHPLPYDGVKSFQTN 110
Query: 75 FLLNELVQKHKIKSAQDSDGLRDFV 99
+ L + H + +++ L ++
Sbjct: 111 YTLTGFLDIHLQATDENAAQLEAYI 135
>gi|42571537|ref|NP_973859.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
gi|332191619|gb|AEE29740.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
Length = 491
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 10 SLKRQHSPPD--NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
S+++ H + +D C +C +L+ E T CGHTFC SC+ + ++ KCP C
Sbjct: 180 SMRKTHGMAERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDRGNKCPLC 233
>gi|328871515|gb|EGG19885.1| MEK1 interacting protein 1 [Dictyostelium fasciculatum]
Length = 367
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
CPICFE + + T CGH FC CI + + CP CS L
Sbjct: 315 CPICFEKMEKMSSTTCGHVFCTDCIQAALTRRKVCPVCSTKL 356
>gi|260824439|ref|XP_002607175.1| hypothetical protein BRAFLDRAFT_68030 [Branchiostoma floridae]
gi|229292521|gb|EEN63185.1| hypothetical protein BRAFLDRAFT_68030 [Branchiostoma floridae]
Length = 720
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKC--SASLPD--MNSVF 72
D L CP+C R+ I C HTFC C+ + Q ++CP C SLPD ++ +
Sbjct: 7 DQFLTCPVCMLHFRDPRILPCLHTFCRECLQEWATKQQPLECPTCRTQVSLPDQGVDGLR 66
Query: 73 PNFLLNELV 81
NF +N L+
Sbjct: 67 TNFYVNNLL 75
>gi|212530822|ref|XP_002145568.1| DNA repair protein (RadR), putative [Talaromyces marneffei ATCC
18224]
gi|210074966|gb|EEA29053.1| DNA repair protein (RadR), putative [Talaromyces marneffei ATCC
18224]
Length = 429
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
+P ++ L C IC + IT C HTFC CI +C+ + KCP C +S
Sbjct: 22 APLESALRCQICKDFFNNPVITSCSHTFCSICIRRCLSSEGKCPACRSS 70
>gi|194705368|gb|ACF86768.1| unknown [Zea mays]
gi|414867310|tpg|DAA45867.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 479
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+D C +CF+L+ E T CGH+FC SC+ + ++ KCP C L
Sbjct: 188 DDFECTLCFKLLYEPVTTPCGHSFCRSCLHQSMDHGNKCPMCRTVL 233
>gi|195065456|ref|XP_001996722.1| GH23566 [Drosophila grimshawi]
gi|193896635|gb|EDV95501.1| GH23566 [Drosophila grimshawi]
Length = 424
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 7 PSRSLKRQHSPPDN----DLLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIKCP 59
P R L R SP N LLCP+C +++R T CGHTFC C I++C K P
Sbjct: 191 PRREL-RVPSPAQNVDYDPLLCPLCGDMLRVPVTTNCGHTFCGQCCETITQCNICHTKFP 249
Query: 60 KCSASLP 66
+C +P
Sbjct: 250 RCVDRMP 256
>gi|408390051|gb|EKJ69464.1| hypothetical protein FPSE_10344 [Fusarium pseudograminearum CS3096]
Length = 789
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFP 73
C IC++ + IT C H FC CI + +++Q KCP C L + + + P
Sbjct: 550 CAICYDNPNDPVITTCKHVFCRGCIIRAIQIQHKCPMCRNKLDETSLLEP 599
>gi|354543533|emb|CCE40252.1| hypothetical protein CPAR2_102900 [Candida parapsilosis]
Length = 422
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
N L C IC E++ T CGH+FC+ C+ + + +I CP C
Sbjct: 27 NSLECSICSEIMLAPMTTECGHSFCYECLHQWFQNKINCPTC 68
>gi|237834067|ref|XP_002366331.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211963995|gb|EEA99190.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
Length = 1440
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 21 DLLCPICFELIREAHITR-CGHTFCFSCISKCVELQIK-CPKCSASLPDMNSVFPNFLLN 78
DL CPIC + + + + C H FC CI KCV ++ CP+C + ++ P+ +
Sbjct: 647 DLSCPICMGIFQNVVVVKDCLHRFCADCIEKCVRTGLRECPQCRIHVASRRALRPDPIFE 706
Query: 79 ELVQK 83
++ K
Sbjct: 707 RILNK 711
>gi|148667014|gb|EDK99430.1| RAD18 homolog (S. cerevisiae), isoform CRA_b [Mus musculus]
Length = 496
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 13 RQHSPPDNDLLCPICFELIREAHIT-RCGHTFCFSCISKCVELQIKCPKC--SASLPDMN 69
R H D+ L C ICFE A I +C H +C CI K + + +CP C + + PD+
Sbjct: 12 RSHQTIDDLLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYKTQCPTCCVAVTEPDLR 71
Query: 70 SVFPNFLLNELVQ 82
+ N LL+ELV+
Sbjct: 72 N---NRLLDELVK 81
>gi|327278398|ref|XP_003223949.1| PREDICTED: tripartite motif-containing protein 72-like [Anolis
carolinensis]
Length = 478
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 4 TSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ----IKCP 59
TS+ R ++ H DL CP+C +L + T CGHTFC C+S+ + + CP
Sbjct: 2 TSSKQRLIQGMH----QDLSCPVCLKLFQSPVTTECGHTFCMDCLSRASKDEDGKATSCP 57
Query: 60 KCSAS 64
C A
Sbjct: 58 VCQAG 62
>gi|226503839|ref|NP_001145128.1| uncharacterized protein LOC100278355 [Zea mays]
gi|195651699|gb|ACG45317.1| hypothetical protein [Zea mays]
Length = 479
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+D C +CF+L+ E T CGH+FC SC+ + ++ KCP C L
Sbjct: 188 DDFECTLCFKLLYEPVTTPCGHSFCRSCLHQSMDHGNKCPMCRTVL 233
>gi|432090032|gb|ELK23640.1| Peroxisome biogenesis factor 10 [Myotis davidii]
Length = 197
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
LC +C E R + T CGH FC+ CI++ + + +CP C P V+
Sbjct: 143 LCTLCLEERRHSTATPCGHLFCWECITQWCDTKTECPLCRERFPPQKLVY 192
>gi|169775839|ref|XP_001822386.1| postreplication repair E3 ubiquitin-protein ligase rad18
[Aspergillus oryzae RIB40]
gi|83771121|dbj|BAE61253.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 408
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P ++ L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 TPLESALRCQVCKDFFDNPVITSCCHTFCSLCIRRCLSTEGKCPACRSSDQELK-LRRNW 80
Query: 76 LLNELVQ 82
+ ELV+
Sbjct: 81 AVQELVE 87
>gi|315054609|ref|XP_003176679.1| hypothetical protein MGYG_00767 [Arthroderma gypseum CBS 118893]
gi|311338525|gb|EFQ97727.1| hypothetical protein MGYG_00767 [Arthroderma gypseum CBS 118893]
Length = 712
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
+L C +C+ L+ + + T CGHTFC C+++ ++ CP C +LP + P+ L N +
Sbjct: 207 ELDCQVCYSLMTDPYTTVCGHTFCRHCVTRMLDTSNLCPVCRRNLP---MILPDDLGNGI 263
Query: 81 V 81
+
Sbjct: 264 L 264
>gi|255584000|ref|XP_002532746.1| RING finger protein, putative [Ricinus communis]
gi|223527523|gb|EEF29648.1| RING finger protein, putative [Ricinus communis]
Length = 224
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
CPIC E T+CGH FC +CI + +Q KCP C
Sbjct: 167 CPICMGPFIEETSTKCGHIFCKACIKTAIGVQSKCPTC 204
>gi|195483787|ref|XP_002090433.1| GE13114 [Drosophila yakuba]
gi|194176534|gb|EDW90145.1| GE13114 [Drosophila yakuba]
Length = 239
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 24 CPICFELIREAH--ITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
CP+C E +RE T CGH FC CI + V CP C P+ + +F
Sbjct: 188 CPVCLEDVREREPVSTTCGHVFCKDCIERAVATGRMCPLCGVDEPEFHRIF 238
>gi|414867311|tpg|DAA45868.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 458
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL 65
+D C +CF+L+ E T CGH+FC SC+ + ++ KCP C L
Sbjct: 167 DDFECTLCFKLLYEPVTTPCGHSFCRSCLHQSMDHGNKCPMCRTVL 212
>gi|332845787|ref|XP_003315121.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Pan troglodytes]
Length = 951
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 12 KRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCPKCSASL 65
K + +PP L CP C ++A +T+C H FCF C+ E Q KCPKC+A+
Sbjct: 887 KLRRNPPAR-LTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAF 940
>gi|327266656|ref|XP_003218120.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 506
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPKCSASLPDMNSVFPNFLLNE 79
+L CPIC E E CGH FC SC+ +C E + CP+C + + + PN L
Sbjct: 13 ELSCPICLEYFVEPVTISCGHNFCQSCLDQCWEGKEASCPQCRKKVQKRD-IRPNRQLAN 71
Query: 80 LV 81
LV
Sbjct: 72 LV 73
>gi|292627456|ref|XP_002666648.1| PREDICTED: tripartite motif-containing protein 16-like [Danio
rerio]
Length = 540
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFP 73
D + C IC +L ++ CGH FC SCI+ C L+ +CP+C + ++
Sbjct: 9 DQEFSCSICLDL-KDPVTLSCGHRFCMSCITDCWNLEDQKRVYRCPQCRRTFTPRPALNN 67
Query: 74 NFLLNELVQKHKIKSAQDSD 93
N +L E++++ K Q +D
Sbjct: 68 NVILAEMLEELKTTRLQTAD 87
>gi|410954675|ref|XP_003983988.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2, partial [Felis catus]
Length = 738
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF---- 75
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF
Sbjct: 429 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKEKLSELLASR-NFNITS 487
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ ++ D + D +E NL+
Sbjct: 488 LAEELIFRYLSDELSDRKRIYDEEMTELSNLT 519
>gi|255982803|emb|CAP08951.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 556
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C +C +L++E + CGH++C SCI C + CP+C + ++ N +L
Sbjct: 15 CSVCLDLLKEPVVIPCGHSYCRSCIEGCWDQDDLKGVYSCPQCRETFTPRPNLRKNNMLA 74
Query: 79 ELVQK 83
ELV+K
Sbjct: 75 ELVEK 79
>gi|384496262|gb|EIE86753.1| hypothetical protein RO3G_11464 [Rhizopus delemar RA 99-880]
Length = 431
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL---PDMNSVFPNF 75
D L C IC T CGHTFC +C+ + ++ Q CP C L P PN
Sbjct: 22 DAILECAICCTRFTLPTTTPCGHTFCKNCLVRSLDHQHACPFCRDPLDFCPP-----PNQ 76
Query: 76 LLNELVQKHKIKSAQDSDGL---RDFVASESQNLSLPDVNLMLEVLNQRKHLL 125
LL+ ++Q+ + + +DGL D + +L+ P V+ ++ V R L+
Sbjct: 77 LLSAVIQQMFGEDEESADGLDPSDDRIPLMVGSLAFPGVSCVIHVFEPRYRLM 129
>gi|198476442|ref|XP_002132359.1| GA25235 [Drosophila pseudoobscura pseudoobscura]
gi|198137696|gb|EDY69761.1| GA25235 [Drosophila pseudoobscura pseudoobscura]
Length = 177
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 20 NDLLCPICFE-LIREAHI-TRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLL 77
N +LCPICFE L E + T CGH FCF C+ V++ CP C S PN+ L
Sbjct: 28 NAVLCPICFEHLHNEGPVATICGHLFCFKCLRNSVKISSACPLCKKSDKRAGLGRPNWHL 87
Query: 78 NELVQKHKIKSAQDSDGLRD 97
I D DG +D
Sbjct: 88 -------IIDLTGDDDGKKD 100
>gi|149758346|ref|XP_001495136.1| PREDICTED: peroxisome biogenesis factor 10-like [Equus caballus]
Length = 294
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
LC +C E R + T CGH FC+ CI++ + + +CP C P V+
Sbjct: 240 LCTLCLEERRHSTATPCGHLFCWECITQWCDTKAECPLCREKFPPQKLVY 289
>gi|345802779|ref|XP_547620.3| PREDICTED: E3 ubiquitin-protein ligase RNF125 [Canis lupus
familiaris]
Length = 232
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 2 SATSTPS----RSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-L 54
SA + P+ R+L+R P P C +C E++ + TRCGH FC SCI+ ++
Sbjct: 9 SAKAAPASGAPRALERSGDPELPVTSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSLKNN 68
Query: 55 QIKCPKCSASLP 66
+ CP C A LP
Sbjct: 69 RWTCPYCRAYLP 80
>gi|291227294|ref|XP_002733627.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 636
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVE----LQIKCPKCSA--SLPD-MNSV 71
DN L+C +C E R A I C H+FC CI K V+ I CP C LP+ +SV
Sbjct: 14 DNFLVCTVCSERYRNAKILPCLHSFCEQCIHKLVQKSGGKNIPCPVCRRVHDLPEGASSV 73
Query: 72 FPNFLLNELV 81
N LNELV
Sbjct: 74 QSNVFLNELV 83
>gi|327266638|ref|XP_003218111.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 475
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSVFPNFLLN 78
+L CPIC E +E CGH FC SC+ C E + CP+C + + ++ PN L
Sbjct: 12 EELACPICLEYFKEPVSLSCGHNFCQSCLDLCWEEKEASCPQCREKVQEGDTR-PNRQLV 70
Query: 79 ELVQ 82
LV+
Sbjct: 71 NLVE 74
>gi|326676959|ref|XP_693785.5| PREDICTED: tripartite motif-containing protein 47-like [Danio
rerio]
Length = 365
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C +C +L+++ CGH++C SC++ C + CP+C + ++ N +L
Sbjct: 15 CSVCLDLLKDPVTINCGHSYCMSCLTDCWNKEDQKGVYSCPQCRKTFTPRPALGKNIILA 74
Query: 79 ELVQKHKIKSAQDSDGLRDF 98
E+V+K K SA G D
Sbjct: 75 EMVEKMKKISAVVPAGSGDM 94
>gi|255982805|emb|CAP08952.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 556
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
+ C +C +L++E + CGH++C SCI C + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVVIPCGHSYCRSCIEGCWDQDDLKGVYSCPQCRETFTPRPNLRKN 70
Query: 75 FLLNELVQK 83
+L ELV+K
Sbjct: 71 NMLAELVEK 79
>gi|426201349|gb|EKV51272.1| hypothetical protein AGABI2DRAFT_197138 [Agaricus bisporus var.
bisporus H97]
Length = 648
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI----SKCVELQIKCPKCSASL 65
DN CPIC +T+CGH FCFSCI S ++CP C S+
Sbjct: 114 DNQTACPICLSPPTAPRMTKCGHIFCFSCILHYLSTSDNKWVRCPICFDSV 164
>gi|325092322|gb|EGC45632.1| hypothetical protein HCEG_04847 [Ajellomyces capsulatus H88]
Length = 588
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKC-VELQIK--CPKCSASLPDMNSVFPNFLLN 78
+ C +C +L+ E CGHTFC+SC+++ V Q K CP C AS+ + P +L+
Sbjct: 154 IYCGVCVKLLYEPFTLACGHTFCYSCLTQWFVSHQRKKTCPDCRASVSAQPA--PAYLIR 211
Query: 79 ELVQ 82
E+V
Sbjct: 212 EIVH 215
>gi|395529826|ref|XP_003767007.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2-like, partial [Sarcophilus harrisii]
Length = 358
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+D C +C L E T CGHTFC C+ +C++ CP C L + S L
Sbjct: 217 SDFECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHTPDCPLCKEKLSEFLASRSYKKTTL 276
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ + + D + D E NL+
Sbjct: 277 TEELILHYLPEELSDRKKVYDDEMKELSNLT 307
>gi|224132232|ref|XP_002321288.1| predicted protein [Populus trichocarpa]
gi|222862061|gb|EEE99603.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
P + CPIC + E T+CGH FC +CI+ ++ Q KCP C
Sbjct: 151 PKEPTFNCPICLCPLVEEMSTKCGHIFCKTCIADAIKRQAKCPTC 195
>gi|149577008|ref|XP_001520684.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
1 [Ornithorhynchus anatinus]
Length = 534
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM--NSVFP-NFL 76
+D C +C L E T CGH+FC +C+ + ++ CP C SL + N F L
Sbjct: 236 SDFECSLCMRLFFEPVTTPCGHSFCKNCLERSLDHAPHCPLCKESLKEYLANRRFSITQL 295
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+QK+ + + + D +E NL+
Sbjct: 296 LEELIQKYLPEELAERKRIYDEENAEHSNLT 326
>gi|52627185|ref|NP_001005315.1| uncharacterized protein LOC368754 [Danio rerio]
gi|26984587|emb|CAD59179.1| novel protein with RING finger domain [Danio rerio]
Length = 278
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVE------LQIKCPKCSASLPDMNSVFPNF 75
CPIC + +++ CGH +C SCI E CP+C + ++ N
Sbjct: 12 FTCPICLDALKDPVTIPCGHNYCMSCIKHYWEKNGSRDTGYTCPECRKTFSPRPALNKNT 71
Query: 76 LLNELVQKHKIKSAQDSDGLRDF--VASESQN 105
+ E+V++ K QD+ R V +E QN
Sbjct: 72 MFAEVVERFKNTGLQDTSPARYMTPVHTERQN 103
>gi|320162947|gb|EFW39846.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 309
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 22 LLCPICFELIREAHIT-RCGHTFCFSCISKCVELQIK-CPKCSASLPDMNSVFPNFLLNE 79
L CP+C LI+ AH C H FC CI+ V + K CP C SLP S+ + L++
Sbjct: 54 LQCPVCLCLIQNAHGNIECLHRFCEECITSAVRMGPKQCPSCRGSLPTRRSLRHDSNLDQ 113
Query: 80 LV 81
LV
Sbjct: 114 LV 115
>gi|317418894|emb|CBN80932.1| Tripartite motif-containing protein 39 [Dicentrarchus labrax]
Length = 464
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL--QIKCPKCSASLPDMNSVF 72
+L CPIC EL E CGH +C +C+ E Q CP+C A P +++
Sbjct: 20 ELTCPICLELFSEPVSLPCGHIYCLACLQTMGEGLDQHSCPECQAEYPGTKALY 73
>gi|126337451|ref|XP_001375429.1| PREDICTED: probable E3 ubiquitin-protein ligase TRIML1-like
[Monodelphis domestica]
Length = 460
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE---LQIKCPKCSASLPDMNSVFPNFLL 77
DL C IC + I +CGH FC C+ +C E KCP+C + D + V PN L
Sbjct: 13 DLTCSICLGYFTDPVIVKCGHNFCRVCLLRCREEADAAFKCPECRGVIEDRD-VVPNRKL 71
Query: 78 NELVQKHK 85
L K
Sbjct: 72 ENLSMTGK 79
>gi|395843198|ref|XP_003794383.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
2 [Otolemur garnettii]
Length = 756
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + L
Sbjct: 447 TDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITIL 506
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D +E NL+
Sbjct: 507 AEELIFRYLSDELSDRKRIYDEEMTELSNLT 537
>gi|302819530|ref|XP_002991435.1| hypothetical protein SELMODRAFT_448405 [Selaginella moellendorffii]
gi|300140828|gb|EFJ07547.1| hypothetical protein SELMODRAFT_448405 [Selaginella moellendorffii]
Length = 210
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
L C ICF+ ++ T CGH FC SCI ++ Q +CP C L +
Sbjct: 151 LTCGICFDTMKNETSTVCGHLFCGSCILSAIQAQKRCPTCRRKLTN 196
>gi|256016441|emb|CAP08970.1| fish virus induced TRIM protein [Oncorhynchus mykiss]
Length = 400
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
+ C +C +L++E + CGH++C SCI C + CP+C + ++ N
Sbjct: 11 DQFCCSVCLDLLKEPVVIPCGHSYCRSCIEGCWDQDDLKGVYSCPQCRETFTPRPNLRKN 70
Query: 75 FLLNELVQK 83
+L ELV+K
Sbjct: 71 NMLAELVEK 79
>gi|327352335|gb|EGE81192.1| peroxisome biosynthesis protein [Ajellomyces dermatitidis ATCC
18188]
Length = 364
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
PP C +C E ++ T CGH FC++CI V + +CP C
Sbjct: 306 PPGQQRKCTLCLESFKDPSATTCGHVFCWTCIRDWVREKPECPLC 350
>gi|326512656|dbj|BAJ99683.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
+D+ CPIC EL+ + + CGH +C SC+ + +KC C P FPN L+
Sbjct: 199 DDVSCPICKELLYQPAVLNCGHVYCISCLPSVGDEALKCQVCGGLHP---GDFPNVCLD 254
>gi|302813290|ref|XP_002988331.1| hypothetical protein SELMODRAFT_447286 [Selaginella moellendorffii]
gi|300144063|gb|EFJ10750.1| hypothetical protein SELMODRAFT_447286 [Selaginella moellendorffii]
Length = 214
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD 67
L C ICF+ ++ T CGH FC SCI ++ Q +CP C L +
Sbjct: 155 LTCGICFDTMKNETSTVCGHLFCGSCILSAIQAQKRCPTCRRKLTN 200
>gi|239614894|gb|EEQ91881.1| peroxisome biosynthesis protein [Ajellomyces dermatitidis ER-3]
Length = 364
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
PP C +C E ++ T CGH FC++CI V + +CP C
Sbjct: 306 PPGQQRKCTLCLESFKDPSATTCGHVFCWTCIRDWVREKPECPLC 350
>gi|170054153|ref|XP_001862997.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874517|gb|EDS37900.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 734
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 1 MSATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPK 60
+A +TP R S +D C +C + +T CGHT+C+ C+ +C++ CP
Sbjct: 305 WTAEATPVRLTVSSSSIEPSDFDCVLCCRTLWRPVVTPCGHTYCWVCLDRCMDYSPSCPL 364
Query: 61 CSASL 65
C A L
Sbjct: 365 CMAPL 369
>gi|328771068|gb|EGF81108.1| hypothetical protein BATDEDRAFT_23820 [Batrachochytrium
dendrobatidis JAM81]
Length = 475
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASL---PDMNSVFP-- 73
C IC EL + +CGH++CF C+ K + Q IKCP C L P NS+
Sbjct: 205 CSICLELYSAPYTLQCGHSYCFHCLQKWCKQQPETSKIKCPACRTLLNLKPHPNSIVQEL 264
Query: 74 -NFLLNEL------VQKHKIKSAQDSDGLRD 97
+ +++ L +QK +I+S + S L D
Sbjct: 265 VDVVIDRLPLSEREIQKERIESLRKSSKLVD 295
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,921,432,052
Number of Sequences: 23463169
Number of extensions: 62507225
Number of successful extensions: 228409
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6307
Number of HSP's successfully gapped in prelim test: 11513
Number of HSP's that attempted gapping in prelim test: 219030
Number of HSP's gapped (non-prelim): 19006
length of query: 140
length of database: 8,064,228,071
effective HSP length: 104
effective length of query: 36
effective length of database: 9,919,025,791
effective search space: 357084928476
effective search space used: 357084928476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)