Your job contains 1 sequence.
>psy10659
MSATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPK
CSASLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQ
RKHLLEAESSVAQYKLLYEL
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10659
(140 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1S705 - symbol:RFWD2 "Uncharacterized protein"... 286 4.0e-25 1
UNIPROTKB|F1NQ64 - symbol:RFWD2 "Uncharacterized protein"... 291 1.0e-24 1
ZFIN|ZDB-GENE-070410-134 - symbol:rfwd2 "ring finger and ... 289 1.6e-24 1
UNIPROTKB|E2RRJ5 - symbol:RFWD2 "Uncharacterized protein"... 288 2.3e-24 1
UNIPROTKB|Q8NHY2 - symbol:RFWD2 "E3 ubiquitin-protein lig... 287 2.9e-24 1
MGI|MGI:1347046 - symbol:Rfwd2 "ring finger and WD repeat... 287 2.9e-24 1
UNIPROTKB|F1MHX1 - symbol:RFWD2 "Uncharacterized protein"... 286 3.8e-24 1
UNIPROTKB|E9PJB5 - symbol:RFWD2 "E3 ubiquitin-protein lig... 236 7.2e-20 1
UNIPROTKB|H0Y339 - symbol:RFWD2 "E3 ubiquitin-protein lig... 225 8.3e-18 1
TAIR|locus:2059359 - symbol:COP1 "CONSTITUTIVE PHOTOMORPH... 222 2.5e-17 1
DICTYBASE|DDB_G0288453 - symbol:DDB_G0288453 "E3 ubiquiti... 220 7.2e-17 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 187 1.1e-14 1
UNIPROTKB|E5RGB3 - symbol:TRIM35 "Tripartite motif-contai... 150 8.8e-13 2
RGD|1306757 - symbol:Rnf125 "ring finger protein 125" spe... 129 5.6e-11 2
RGD|1564642 - symbol:Trim35 "tripartite motif-containing ... 134 9.0e-11 2
UNIPROTKB|Q5RKG6 - symbol:Trim35 "Tripartite motif-contai... 134 9.0e-11 2
MGI|MGI:1914104 - symbol:Trim35 "tripartite motif-contain... 134 3.0e-10 2
MGI|MGI:1914914 - symbol:Rnf125 "ring finger protein 125"... 122 3.9e-10 2
UNIPROTKB|F1RJT2 - symbol:TRIM35 "Uncharacterized protein... 152 4.9e-10 1
UNIPROTKB|E2QT66 - symbol:TRIM35 "Uncharacterized protein... 151 6.4e-10 1
UNIPROTKB|Q9UPQ4 - symbol:TRIM35 "Tripartite motif-contai... 150 8.1e-10 1
WB|WBGene00011366 - symbol:T02C1.2 species:6239 "Caenorha... 144 9.6e-10 1
UNIPROTKB|E9PMW8 - symbol:RFWD2 "E3 ubiquitin-protein lig... 137 2.2e-09 1
UNIPROTKB|Q28DL4 - symbol:traf6 "TNF receptor-associated ... 126 2.9e-09 2
UNIPROTKB|E9PJJ9 - symbol:TRIM68 "E3 ubiquitin-protein li... 134 4.7e-09 1
UNIPROTKB|E9PR29 - symbol:TRIM68 "E3 ubiquitin-protein li... 134 4.7e-09 1
UNIPROTKB|E1B7M2 - symbol:TRIM31 "Uncharacterized protein... 140 4.9e-09 1
DICTYBASE|DDB_G0270568 - symbol:DDB_G0270568 "C3HC4-type ... 139 9.5e-09 1
UNIPROTKB|G3MWR7 - symbol:TRIM31 "Uncharacterized protein... 140 1.0e-08 1
MGI|MGI:102749 - symbol:Trim25 "tripartite motif-containi... 109 1.2e-08 3
UNIPROTKB|F1NNQ7 - symbol:Gga.54568 "Uncharacterized prot... 140 1.4e-08 1
ZFIN|ZDB-GENE-070424-55 - symbol:ftr61 "finTRIM family, m... 139 1.5e-08 1
ZFIN|ZDB-GENE-040426-745 - symbol:rad18 "RAD18 homolog (S... 136 2.1e-08 1
ZFIN|ZDB-GENE-090507-8 - symbol:ftr43 "finTRIM family, me... 119 2.6e-08 2
UNIPROTKB|F1MTW9 - symbol:TRIM35 "Uncharacterized protein... 136 2.6e-08 1
UNIPROTKB|B3KUN7 - symbol:LONRF3 "LON peptidase N-termina... 136 2.7e-08 1
UNIPROTKB|H0Y7Q8 - symbol:LONRF3 "LON peptidase N-termina... 136 2.9e-08 1
UNIPROTKB|D4A339 - symbol:Trim47l "Protein Trim47l" speci... 126 3.3e-08 2
UNIPROTKB|F1LMT9 - symbol:Trim47l "Protein Trim47l" speci... 126 3.3e-08 2
UNIPROTKB|K7GS78 - symbol:LONRF3 "Uncharacterized protein... 137 3.4e-08 1
UNIPROTKB|K7GKX2 - symbol:LONRF3 "Uncharacterized protein... 137 3.5e-08 1
UNIPROTKB|K7GLC4 - symbol:LONRF3 "Uncharacterized protein... 137 3.8e-08 1
UNIPROTKB|F1RU80 - symbol:LONRF3 "Uncharacterized protein... 137 4.0e-08 1
UNIPROTKB|Q6AZZ1 - symbol:TRIM68 "E3 ubiquitin-protein li... 134 4.2e-08 1
UNIPROTKB|B0V1M0 - symbol:TRIM31 "E3 ubiquitin-protein li... 128 4.5e-08 1
UNIPROTKB|G3X6C1 - symbol:LONRF3 "Uncharacterized protein... 136 4.9e-08 1
UNIPROTKB|Q496Y0 - symbol:LONRF3 "LON peptidase N-termina... 136 4.9e-08 1
UNIPROTKB|F1PSB6 - symbol:LONRF3 "Uncharacterized protein... 136 5.0e-08 1
UNIPROTKB|I7GGX8 - symbol:TRIM31 "Tripartite motif protei... 132 5.3e-08 1
MGI|MGI:2385051 - symbol:Trim31 "tripartite motif-contain... 133 5.8e-08 1
UNIPROTKB|K7GL56 - symbol:LOC100517591 "Uncharacterized p... 124 5.9e-08 1
UNIPROTKB|A7XUJ6 - symbol:TRAF6 "TNF receptor-associated ... 119 6.0e-08 2
UNIPROTKB|F1NGM4 - symbol:TRIM35 "Uncharacterized protein... 132 6.8e-08 1
UNIPROTKB|K7GRY7 - symbol:TRIM31 "Uncharacterized protein... 132 8.3e-08 1
UNIPROTKB|B6ICU7 - symbol:TRIM31 "Tripartite motif-contai... 132 9.0e-08 1
UNIPROTKB|F1RYH5 - symbol:TRIM31 "Uncharacterized protein... 132 9.0e-08 1
ZFIN|ZDB-GENE-070912-227 - symbol:ftr05 "finTRIM family, ... 110 9.6e-08 2
RGD|1562137 - symbol:Lonrf2 "LON peptidase N-terminal dom... 131 9.8e-08 1
UNIPROTKB|E1BJY5 - symbol:RNF125 "Uncharacterized protein... 124 1.0e-07 1
UNIPROTKB|F1SAL7 - symbol:LOC100517591 "Uncharacterized p... 124 1.0e-07 1
UNIPROTKB|E1C7S4 - symbol:TRIM50 "Uncharacterized protein... 130 1.2e-07 1
ZFIN|ZDB-GENE-101021-4 - symbol:lonrf1 "LON peptidase N-t... 131 1.2e-07 1
FB|FBgn0032660 - symbol:elfless "elfless" species:7227 "D... 123 1.3e-07 1
ZFIN|ZDB-GENE-070912-195 - symbol:ftr11 "finTRIM family, ... 117 1.3e-07 2
UNIPROTKB|Q96EQ8 - symbol:RNF125 "E3 ubiquitin-protein li... 123 1.3e-07 1
ZFIN|ZDB-GENE-040813-1 - symbol:rnf114 "ring finger prote... 122 1.4e-07 1
UNIPROTKB|Q7ZWM8 - symbol:rnf2-b "E3 ubiquitin-protein li... 104 1.5e-07 2
UNIPROTKB|Q66J69 - symbol:rnf2-a "E3 ubiquitin-protein li... 104 1.5e-07 2
UNIPROTKB|A6NI17 - symbol:TRIM31 "E3 ubiquitin-protein li... 128 1.5e-07 1
UNIPROTKB|C9JJD5 - symbol:TRIM31 "E3 ubiquitin-protein li... 128 1.5e-07 1
UNIPROTKB|E7ETS6 - symbol:TRIM31 "E3 ubiquitin-protein li... 128 1.5e-07 1
UNIPROTKB|F8W1J7 - symbol:TRIM31 "E3 ubiquitin-protein li... 128 1.5e-07 1
UNIPROTKB|G8JLN1 - symbol:TRIM31 "E3 ubiquitin-protein li... 128 1.5e-07 1
UNIPROTKB|Q9BZY9 - symbol:TRIM31 "E3 ubiquitin-protein li... 128 1.5e-07 1
ASPGD|ASPL0000065492 - symbol:uvsH species:162425 "Emeric... 128 1.6e-07 1
ZFIN|ZDB-GENE-060810-140 - symbol:trim105 "tripartite mot... 127 2.0e-07 1
UNIPROTKB|F1PFH1 - symbol:LOC483307 "Uncharacterized prot... 129 2.1e-07 1
UNIPROTKB|Q1LZH3 - symbol:LOC526787 "LOC526787 protein" s... 129 2.1e-07 1
ZFIN|ZDB-GENE-081104-397 - symbol:lonrf1l "LON peptidase ... 130 2.1e-07 1
MGI|MGI:1921615 - symbol:Lonrf3 "LON peptidase N-terminal... 130 2.1e-07 1
UNIPROTKB|C9JWC5 - symbol:TRIM22 "E3 ubiquitin-protein li... 109 2.4e-07 2
ZFIN|ZDB-GENE-030131-8303 - symbol:si:ch1073-440b2.1 "si:... 127 2.4e-07 1
RGD|1308607 - symbol:Trim31 "tripartite motif-containing ... 127 2.6e-07 1
UNIPROTKB|F1STF3 - symbol:LONRF2 "Uncharacterized protein... 127 2.9e-07 1
ZFIN|ZDB-GENE-030616-265 - symbol:si:busm1-182n13.1 "si:b... 117 2.9e-07 1
DICTYBASE|DDB_G0269614 - symbol:DDB_G0269614 "tetratricop... 125 3.3e-07 1
ZFIN|ZDB-GENE-080218-19 - symbol:ftr46 "finTRIM family, m... 124 3.5e-07 1
UNIPROTKB|J9PBI0 - symbol:RNF125 "Uncharacterized protein... 119 3.8e-07 1
TAIR|locus:505006682 - symbol:AT5G48655 species:3702 "Ara... 117 3.9e-07 1
UNIPROTKB|Q1L5Z9 - symbol:LONRF2 "LON peptidase N-termina... 127 4.5e-07 1
ZFIN|ZDB-GENE-090312-35 - symbol:ftr57 "finTRIM family, m... 125 4.7e-07 1
WB|WBGene00003597 - symbol:nhl-1 species:6239 "Caenorhabd... 128 4.8e-07 1
UNIPROTKB|Q03601 - symbol:nhl-1 "RING finger protein nhl-... 128 4.8e-07 1
UNIPROTKB|F1PPT8 - symbol:LONRF2 "Uncharacterized protein... 127 5.0e-07 1
UNIPROTKB|F1NWA3 - symbol:F1NWA3 "Uncharacterized protein... 125 5.1e-07 1
ZFIN|ZDB-GENE-081031-50 - symbol:btr19 "bloodthirsty-rela... 115 5.2e-07 1
TAIR|locus:2064392 - symbol:DRIP2 "DREB2A-interacting pro... 107 5.5e-07 2
UNIPROTKB|F1RVW9 - symbol:LOC100514979 "Uncharacterized p... 125 5.7e-07 1
UNIPROTKB|I3LAM0 - symbol:LOC100514979 "Uncharacterized p... 125 5.7e-07 1
TAIR|locus:2099212 - symbol:AT3G62970 species:3702 "Arabi... 119 6.8e-07 1
WARNING: Descriptions of 542 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1S705 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104377
EMBL:CU638728 EMBL:CU855662 Ensembl:ENSSSCT00000016896
Uniprot:F1S705
Length = 425
Score = 286 (105.7 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 58/144 (40%), Positives = 90/144 (62%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
L + ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++
Sbjct: 122 LINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDH 181
Query: 71 VFPNFLLNELVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLML 115
++PNFL+NEL+ K K + S ++G R D + ++ NL L +VNLML
Sbjct: 182 LYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLML 241
Query: 116 EVLNQRKHLLEAESSVAQYKLLYE 139
E+L Q+K LEAES AQ ++L E
Sbjct: 242 ELLVQKKKQLEAESHAAQLQILME 265
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 291 (107.5 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 59/150 (39%), Positives = 94/150 (62%)
Query: 6 TP-SRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
TP L + ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+
Sbjct: 103 TPLCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV 162
Query: 65 LPDMNSVFPNFLLNELVQKHKIKSAQ----------DSDG-----LRDFVASESQNLSLP 109
+ +++ ++PNFL+NEL+ K K +S + ++G ++D + ++ NL L
Sbjct: 163 VDNIDHLYPNFLVNELILKQKQRSEEKRFKLDHSVSSTNGHRWQIIQDLLGTDQDNLDLA 222
Query: 110 DVNLMLEVLNQRKHLLEAESSVAQYKLLYE 139
+VNLMLE+L Q+K LEAES AQ ++L E
Sbjct: 223 NVNLMLELLVQKKKQLEAESHAAQLQILME 252
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 289 (106.8 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 55/131 (41%), Positives = 87/131 (66%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICFE+I EAH+T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 94 NDFVCPICFEMIEEAHMTKCGHSFCYKCIRQSLEDSNRCPKCNYIIDNVDQLYPNFLVNE 153
Query: 80 LVQKHKIKSAQDS------DGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
L+ K K +S + +G + D + ++ +N+ L +VN +LE L Q+K LEAE
Sbjct: 154 LILKQKQRSEEKRLKRDHPNGTKWQVFQDVLGADQENMDLANVNYILEYLLQKKKQLEAE 213
Query: 129 SSVAQYKLLYE 139
S AQ ++L E
Sbjct: 214 SQAAQRQILME 224
>UNIPROTKB|E2RRJ5 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 OMA:PICFEMI
CTD:64326 GeneTree:ENSGT00700000104377 EMBL:AAEX03005193
EMBL:AAEX03005194 RefSeq:XP_537181.2 ProteinModelPortal:E2RRJ5
Ensembl:ENSCAFT00000022674 GeneID:480060 KEGG:cfa:480060
Uniprot:E2RRJ5
Length = 733
Score = 288 (106.4 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 57/135 (42%), Positives = 89/135 (65%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NE
Sbjct: 134 NDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNE 193
Query: 80 LVQKHKIK----------SAQDSDG-----LRDFVASESQNLSLPDVNLMLEVLNQRKHL 124
L+ K K + S ++G L+D + ++ NL L +VNLMLE+L Q+K
Sbjct: 194 LILKQKQRFEEKRFKLDHSVSSTNGHRWQILQDLLGTDQDNLDLANVNLMLELLVQKKKQ 253
Query: 125 LEAESSVAQYKLLYE 139
LEAES AQ ++L E
Sbjct: 254 LEAESHAAQLQILME 268
>UNIPROTKB|Q8NHY2 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006977
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 eggNOG:COG2319 EMBL:CH471067 GO:GO:0005925
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
EMBL:AF508940 EMBL:BK000438 EMBL:AF527539 EMBL:AY509921
EMBL:AK025789 EMBL:AK314750 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 EMBL:BC094728 IPI:IPI00171771
IPI:IPI00184865 IPI:IPI00431955 RefSeq:NP_001001740.1
RefSeq:NP_071902.2 UniGene:Hs.523744 ProteinModelPortal:Q8NHY2
SMR:Q8NHY2 IntAct:Q8NHY2 MINT:MINT-260162 STRING:Q8NHY2
PhosphoSite:Q8NHY2 DMDM:55976539 PaxDb:Q8NHY2 PRIDE:Q8NHY2
DNASU:64326 Ensembl:ENST00000308769 Ensembl:ENST00000367669
GeneID:64326 KEGG:hsa:64326 UCSC:uc001gku.1 UCSC:uc001gkv.1
UCSC:uc009wwv.2 CTD:64326 GeneCards:GC01M175913 HGNC:HGNC:17440
HPA:HPA028197 MIM:608067 neXtProt:NX_Q8NHY2 PharmGKB:PA134952161
HOVERGEN:HBG054995 InParanoid:Q8NHY2 OrthoDB:EOG4M0F18
ChiTaRS:RFWD2 GenomeRNAi:64326 NextBio:66247 ArrayExpress:Q8NHY2
Bgee:Q8NHY2 CleanEx:HS_RFWD2 Genevestigator:Q8NHY2
GermOnline:ENSG00000143207 Uniprot:Q8NHY2
Length = 731
Score = 287 (106.1 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 58/144 (40%), Positives = 91/144 (63%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
L + ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++
Sbjct: 123 LINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDH 182
Query: 71 VFPNFLLNELVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLML 115
++PNFL+NEL+ K K + S ++G R D++ ++ NL L +VNLML
Sbjct: 183 LYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLML 242
Query: 116 EVLNQRKHLLEAESSVAQYKLLYE 139
E+L Q+K LEAES AQ ++L E
Sbjct: 243 ELLVQKKKQLEAESHAAQLQILME 266
>MGI|MGI:1347046 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1347046
Prosite:PS00518 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0016874 GO:GO:0016607 GO:GO:0008270 eggNOG:COG2319
GO:GO:0005925 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
CTD:64326 HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 ChiTaRS:RFWD2
EMBL:AF151110 EMBL:BC082804 IPI:IPI00621828 RefSeq:NP_036061.1
UniGene:Mm.328135 ProteinModelPortal:Q9R1A8 SMR:Q9R1A8
STRING:Q9R1A8 PhosphoSite:Q9R1A8 PaxDb:Q9R1A8 PRIDE:Q9R1A8
Ensembl:ENSMUST00000076894 GeneID:26374 KEGG:mmu:26374
UCSC:uc007ddz.1 GeneTree:ENSGT00700000104377 InParanoid:Q9R1A8
NextBio:304277 Bgee:Q9R1A8 CleanEx:MM_RFWD2 Genevestigator:Q9R1A8
GermOnline:ENSMUSG00000048949 Uniprot:Q9R1A8
Length = 733
Score = 287 (106.1 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 58/144 (40%), Positives = 90/144 (62%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
L + ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++
Sbjct: 125 LLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDH 184
Query: 71 VFPNFLLNELVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLML 115
++PNFL+NEL+ K K + S ++G R D + ++ NL L +VNLML
Sbjct: 185 LYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLML 244
Query: 116 EVLNQRKHLLEAESSVAQYKLLYE 139
E+L Q+K LEAES AQ ++L E
Sbjct: 245 ELLVQKKKQLEAESHAAQLQILME 268
>UNIPROTKB|F1MHX1 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:DAAA02043390 EMBL:DAAA02043391
EMBL:DAAA02043392 IPI:IPI00841834 UniGene:Bt.7449
Ensembl:ENSBTAT00000044452 ArrayExpress:F1MHX1 Uniprot:F1MHX1
Length = 735
Score = 286 (105.7 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 58/144 (40%), Positives = 90/144 (62%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
L + ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++
Sbjct: 127 LINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDH 186
Query: 71 VFPNFLLNELVQKHKIK----------SAQDSDGLR-----DFVASESQNLSLPDVNLML 115
++PNFL+NEL+ K K + S ++G R D + ++ NL L +VNLML
Sbjct: 187 LYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLML 246
Query: 116 EVLNQRKHLLEAESSVAQYKLLYE 139
E+L Q+K LEAES AQ ++L E
Sbjct: 247 ELLVQKKKQLEAESHAAQLQILME 270
>UNIPROTKB|E9PJB5 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
IPI:IPI00980524 ProteinModelPortal:E9PJB5 SMR:E9PJB5
Ensembl:ENST00000498306 ArrayExpress:E9PJB5 Bgee:E9PJB5
Uniprot:E9PJB5
Length = 189
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 50/125 (40%), Positives = 80/125 (64%)
Query: 30 LIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIK-- 87
+I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K K +
Sbjct: 1 MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFE 60
Query: 88 --------SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
S ++G R D++ ++ NL L +VNLMLE+L Q+K LEAES AQ
Sbjct: 61 EKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL 120
Query: 135 KLLYE 139
++L E
Sbjct: 121 QILME 125
>UNIPROTKB|H0Y339 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL359265 EMBL:AL162736 EMBL:AL513329 EMBL:AL590723
HGNC:HGNC:17440 ChiTaRS:RFWD2 Ensembl:ENST00000367666 Bgee:H0Y339
Uniprot:H0Y339
Length = 566
Score = 225 (84.3 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 48/121 (39%), Positives = 77/121 (63%)
Query: 34 AHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELVQKHKIK------ 87
A++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+NEL+ K K +
Sbjct: 1 AYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRF 60
Query: 88 ----SAQDSDGLR-----DFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLY 138
S ++G R D++ ++ NL L +VNLMLE+L Q+K LEAES AQ ++L
Sbjct: 61 KLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQLQILM 120
Query: 139 E 139
E
Sbjct: 121 E 121
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 222 (83.2 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 45/125 (36%), Positives = 77/125 (61%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D DLLCPIC ++I++A +T CGH+FC+ CI + + CP CS L + N ++PNFLL+
Sbjct: 47 DKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTN-NQLYPNFLLD 105
Query: 79 ELVQK----HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQY 134
+L++K H K+A D R+ + ++S+ +V+ +L +L +RK +E E +
Sbjct: 106 KLLKKTSARHVSKTASPLDQFREAL-QRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNM 164
Query: 135 KLLYE 139
++L +
Sbjct: 165 QILLD 169
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 220 (82.5 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 46/123 (37%), Positives = 72/123 (58%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D LLCP+C ++I+E I++CGH+FC+ CI + CP C L +FPNF LN
Sbjct: 151 DELLLCPVCNDMIKEPFISKCGHSFCYQCIIIHLSKSKTCPICMVYLT-REQIFPNFALN 209
Query: 79 ELVQKHKIKSAQ-DSDGLRDFVASES-QNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKL 136
+ V+K +KS+ + ++ F + S +NLSL D+NLM+ L ++K LE +Y +
Sbjct: 210 KFVEKIGVKSSLLPTPTVKQFRNTLSNENLSLHDINLMVSTLLEKKKNLEVHDQQVEYDI 269
Query: 137 LYE 139
L +
Sbjct: 270 LLD 272
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 28/66 (42%), Positives = 47/66 (71%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS 70
L + ND +CPICF++I EA++T+CGH+FC+ CI + +E +CPKC+ + +++
Sbjct: 28 LINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDH 87
Query: 71 VFPNFL 76
++PNFL
Sbjct: 88 LYPNFL 93
>UNIPROTKB|E5RGB3 [details] [associations]
symbol:TRIM35 "Tripartite motif-containing protein 35"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
HGNC:HGNC:16285 EMBL:AC124649 IPI:IPI00974297
ProteinModelPortal:E5RGB3 SMR:E5RGB3 Ensembl:ENST00000521253
UCSC:uc010lup.1 ArrayExpress:E5RGB3 Bgee:E5RGB3 Uniprot:E5RGB3
Length = 266
Score = 150 (57.9 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 34/81 (41%), Positives = 46/81 (56%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K + LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 11 PSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 64 ASPADLRT---NHTLNNLVEK 81
Score = 37 (18.1 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 90 QDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
Q+ D LR+F+ E Q + ++ M E Q K LL E
Sbjct: 157 QEFDKLREFLRVEEQAI----LDAMAEETRQ-KQLLADE 190
>RGD|1306757 [details] [associations]
symbol:Rnf125 "ring finger protein 125" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 RGD:1306757 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 EMBL:CH473974
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946 CTD:54941
eggNOG:NOG46770 HOVERGEN:HBG098958 KO:K12170 OMA:RTRCGHV
OrthoDB:EOG4SJ5FM EMBL:BC162061 IPI:IPI00870006
RefSeq:NP_001101894.1 UniGene:Rn.163367 STRING:B1WCA3
Ensembl:ENSRNOT00000021136 GeneID:361296 KEGG:rno:361296
NextBio:675857 Genevestigator:B1WCA3 Uniprot:B1WCA3
Length = 233
Score = 129 (50.5 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 4 TSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CP 59
TS+ R+L+R P P C +C E++ + TRCGH FC SCI+ ++ K CP
Sbjct: 15 TSSARRTLERSGDPELPITSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCP 74
Query: 60 KCSASLP 66
C A LP
Sbjct: 75 YCRAYLP 81
Score = 40 (19.1 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 58 CPKCSASLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDF-VASESQNLSLPDVNLMLE 116
CP C + + S F L+ L H + D DF + E+ + D +L LE
Sbjct: 171 CPLCHSQPNESPSTFSGSLIRHLQVSHTLFY----DDFIDFDIIEEAIIRRVLDRSL-LE 225
Query: 117 VLNQ 120
+NQ
Sbjct: 226 YVNQ 229
Score = 36 (17.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 101 SESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
SE QN + + ++ + + R H+ E + +Y L EL
Sbjct: 96 SEYQNCT--ECGTLVCLSDMRAHIRTCEKYIDKYGPLQEL 133
>RGD|1564642 [details] [associations]
symbol:Trim35 "tripartite motif-containing 35" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0043065 "positive regulation
of apoptotic process" evidence=ISO] [GO:0045930 "negative
regulation of mitotic cell cycle" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:1564642
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0008285 GO:GO:0006917 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 GO:GO:0045930 HSSP:Q99728 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 CTD:23087
eggNOG:NOG285726 HOGENOM:HOG000124586 HOVERGEN:HBG098569 KO:K12012
OrthoDB:EOG4QNMW8 EMBL:BC085942 EMBL:BC094955 IPI:IPI00203625
RefSeq:NP_001020313.2 UniGene:Rn.153980 ProteinModelPortal:Q5RKG6
PRIDE:Q5RKG6 GeneID:498538 KEGG:rno:498538 UCSC:RGD:1564642
InParanoid:Q4VBW2 NextBio:700099 Genevestigator:Q5RKG6
Uniprot:Q5RKG6
Length = 501
Score = 134 (52.2 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S + PSRS K + LLC +C++ R+A RCGH FC C+S C E+Q CP
Sbjct: 6 SVSPGPSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCP 58
Query: 60 KCSA-SLPDMNSVFPNFLLNELVQ 82
C ++P + N LN LV+
Sbjct: 59 VCKERAVP--GELRTNHTLNNLVE 80
Score = 47 (21.6 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 93 DGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQ 133
D LRDF+ E Q V+ M E +++KHLL AE + Q
Sbjct: 192 DKLRDFLRVEEQ----ATVDAMKEE-SRKKHLL-AEEKMKQ 226
>UNIPROTKB|Q5RKG6 [details] [associations]
symbol:Trim35 "Tripartite motif-containing protein 35"
species:10116 "Rattus norvegicus" [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
RGD:1564642 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
GO:GO:0006915 GO:GO:0008285 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 GO:GO:0045930 HSSP:Q99728 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 CTD:23087
eggNOG:NOG285726 HOGENOM:HOG000124586 HOVERGEN:HBG098569 KO:K12012
OrthoDB:EOG4QNMW8 EMBL:BC085942 EMBL:BC094955 IPI:IPI00203625
RefSeq:NP_001020313.2 UniGene:Rn.153980 ProteinModelPortal:Q5RKG6
PRIDE:Q5RKG6 GeneID:498538 KEGG:rno:498538 UCSC:RGD:1564642
InParanoid:Q4VBW2 NextBio:700099 Genevestigator:Q5RKG6
Uniprot:Q5RKG6
Length = 501
Score = 134 (52.2 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S + PSRS K + LLC +C++ R+A RCGH FC C+S C E+Q CP
Sbjct: 6 SVSPGPSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCP 58
Query: 60 KCSA-SLPDMNSVFPNFLLNELVQ 82
C ++P + N LN LV+
Sbjct: 59 VCKERAVP--GELRTNHTLNNLVE 80
Score = 47 (21.6 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 93 DGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQ 133
D LRDF+ E Q V+ M E +++KHLL AE + Q
Sbjct: 192 DKLRDFLRVEEQ----ATVDAMKEE-SRKKHLL-AEEKMKQ 226
>MGI|MGI:1914104 [details] [associations]
symbol:Trim35 "tripartite motif-containing 35" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IDA] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
MGI:MGI:1914104 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
GO:GO:0006915 GO:GO:0008285 GO:GO:0006917 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 GO:GO:0045930 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 CTD:23087 eggNOG:NOG285726
HOVERGEN:HBG098569 KO:K12012 OrthoDB:EOG4QNMW8 EMBL:AB060155
EMBL:AF145374 EMBL:AF491350 EMBL:AK003000 EMBL:AK032635
EMBL:AK075877 EMBL:AK129288 EMBL:BC049105 EMBL:BC053494
EMBL:BC145783 EMBL:BC145809 IPI:IPI00410787 IPI:IPI00475406
RefSeq:NP_084255.2 UniGene:Mm.43871 ProteinModelPortal:Q8C006
SMR:Q8C006 IntAct:Q8C006 STRING:Q8C006 PRIDE:Q8C006
Ensembl:ENSMUST00000022623 GeneID:66854 KEGG:mmu:66854
UCSC:uc007ukc.1 UCSC:uc007uke.1 GeneTree:ENSGT00680000099496
InParanoid:Q8C006 ChiTaRS:TRIM35 NextBio:322823 Bgee:Q8C006
CleanEx:MM_TRIM35 Genevestigator:Q8C006
GermOnline:ENSMUSG00000022043 Uniprot:Q8C006
Length = 501
Score = 134 (52.2 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S + PSRS K + LLC +C++ R+A RCGH FC C+S C E+Q CP
Sbjct: 6 SVSPGPSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTPSCP 58
Query: 60 KCSA-SLPDMNSVFPNFLLNELVQ 82
C ++P + N LN LV+
Sbjct: 59 VCKERAVP--GELRTNHTLNNLVE 80
Score = 42 (19.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 93 DGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQ 133
D LRDF+ E Q ++ M E +++KHL +AE + Q
Sbjct: 192 DKLRDFLRVEEQ----ATLDAMKEE-SRKKHL-QAEEKMKQ 226
>MGI|MGI:1914914 [details] [associations]
symbol:Rnf125 "ring finger protein 125" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
UniPathway:UPA00143 MGI:MGI:1914914 Prosite:PS00518 GO:GO:0005829
GO:GO:0046872 GO:GO:0008270 Reactome:REACT_107772 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946 CTD:54941
eggNOG:NOG46770 HOVERGEN:HBG098958 KO:K12170 OrthoDB:EOG4SJ5FM
EMBL:AK006569 EMBL:AK050395 EMBL:AC138611 EMBL:BC094290
EMBL:BC116883 EMBL:BC116887 IPI:IPI00137236 IPI:IPI00269061
RefSeq:NP_080577.1 UniGene:Mm.45980 ProteinModelPortal:Q9D9R0
SMR:Q9D9R0 STRING:Q9D9R0 PhosphoSite:Q9D9R0 PRIDE:Q9D9R0
Ensembl:ENSMUST00000050004 GeneID:67664 KEGG:mmu:67664
UCSC:uc008eez.1 UCSC:uc008efa.1 InParanoid:Q0VG32 OMA:VPNENAN
ChiTaRS:RNF125 NextBio:325181 Bgee:Q9D9R0 CleanEx:MM_RNF125
Genevestigator:Q9D9R0 GermOnline:ENSMUSG00000033107 Uniprot:Q9D9R0
Length = 233
Score = 122 (48.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--C 58
A++TP R+L+R P C +C E++ + TRCGH FC SCI+ ++ K C
Sbjct: 15 ASATP-RTLERSGDSELPITSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTC 73
Query: 59 PKCSASLP 66
P C A LP
Sbjct: 74 PYCRAYLP 81
Score = 40 (19.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 21/65 (32%), Positives = 29/65 (44%)
Query: 58 CPKCSASLPDMN-SVFPNFLLNELVQKHKIKSAQDSDGLRDF-VASESQNLSLPDVNLML 115
CP C S PD + S F L+ L H + D DF + E+ + D +L L
Sbjct: 171 CPLCH-SRPDESPSTFNGSLIRHLQVSHTLFY----DDFIDFDIIEEAIIRRVLDRSL-L 224
Query: 116 EVLNQ 120
E +NQ
Sbjct: 225 EYVNQ 229
Score = 36 (17.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 101 SESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYEL 140
SE QN + + ++ + + R H+ E + +Y L EL
Sbjct: 96 SEYQNCA--ECGTLVCLSDMRAHIRTCEKYIDKYGPLLEL 133
>UNIPROTKB|F1RJT2 [details] [associations]
symbol:TRIM35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 GO:GO:0045930 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 CTD:23087 KO:K12012
OMA:ARWTGHR GeneTree:ENSGT00680000099496 EMBL:CT990535
RefSeq:XP_001928415.1 UniGene:Ssc.95495 ProteinModelPortal:F1RJT2
Ensembl:ENSSSCT00000010595 GeneID:100152706 KEGG:ssc:100152706
Uniprot:F1RJT2
Length = 493
Score = 152 (58.6 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CP 59
+A+ PSRS K + LLC +C++ R+A RCGH FC C+++C E+Q+ CP
Sbjct: 6 AASPGPSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVTRCWEVQVAPTCP 58
Query: 60 KCS-ASLPDMNSVFPNFLLNELVQK 83
C + P + + PN LN LV+K
Sbjct: 59 VCKDRAAP--SDLRPNHTLNNLVEK 81
>UNIPROTKB|E2QT66 [details] [associations]
symbol:TRIM35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 GO:GO:0045930 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 CTD:23087 KO:K12012
OMA:ARWTGHR GeneTree:ENSGT00680000099496 EMBL:AAEX03014346
RefSeq:XP_543229.3 Ensembl:ENSCAFT00000013835 GeneID:486103
KEGG:cfa:486103 NextBio:20859944 Uniprot:E2QT66
Length = 493
Score = 151 (58.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 38/107 (35%), Positives = 57/107 (53%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K + LLC +C++ R+A RCGH FC C+++C E+Q+ CP C
Sbjct: 11 PSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVTRCWEVQVAPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLP 109
A+L D+ + N LN LV+K ++++G R + S L P
Sbjct: 64 AALADLRT---NHTLNNLVEK---LLREEAEGAR-WAGPRSPRLCRP 103
>UNIPROTKB|Q9UPQ4 [details] [associations]
symbol:TRIM35 "Tripartite motif-containing protein 35"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IDA] [GO:0006917 "induction of apoptosis"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0006915 GO:GO:0008285 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 GO:GO:0045930 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AF492463
EMBL:AB029021 EMBL:BC018337 EMBL:BC069226 IPI:IPI00012331
IPI:IPI00746107 RefSeq:NP_741983.2 UniGene:Hs.104223
ProteinModelPortal:Q9UPQ4 SMR:Q9UPQ4 IntAct:Q9UPQ4 STRING:Q9UPQ4
PhosphoSite:Q9UPQ4 DMDM:56404980 PRIDE:Q9UPQ4 DNASU:23087
Ensembl:ENST00000305364 GeneID:23087 KEGG:hsa:23087 UCSC:uc003xfl.1
CTD:23087 GeneCards:GC08M027142 HGNC:HGNC:16285 HPA:HPA019647
neXtProt:NX_Q9UPQ4 PharmGKB:PA38115 eggNOG:NOG285726
HOGENOM:HOG000124586 HOVERGEN:HBG098569 InParanoid:Q9UPQ4 KO:K12012
OMA:ARWTGHR OrthoDB:EOG4QNMW8 GenomeRNAi:23087 NextBio:44229
ArrayExpress:Q9UPQ4 Bgee:Q9UPQ4 CleanEx:HS_TRIM35
Genevestigator:Q9UPQ4 GermOnline:ENSG00000104228 Uniprot:Q9UPQ4
Length = 493
Score = 150 (57.9 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 34/81 (41%), Positives = 46/81 (56%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CPKCS-- 62
PSRS K + LLC +C++ R+A RCGH FC C+S+C E+Q+ CP C
Sbjct: 11 PSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDR 63
Query: 63 ASLPDMNSVFPNFLLNELVQK 83
AS D+ + N LN LV+K
Sbjct: 64 ASPADLRT---NHTLNNLVEK 81
>WB|WBGene00011366 [details] [associations]
symbol:T02C1.2 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 EMBL:Z19156
RefSeq:NP_001022740.2 ProteinModelPortal:Q7YWU1 SMR:Q7YWU1
EnsemblMetazoa:T02C1.2 GeneID:176306 KEGG:cel:CELE_T02C1.2
UCSC:T02C1.2 CTD:176306 WormBase:T02C1.2 eggNOG:nemNOG04237
HOGENOM:HOG000019178 InParanoid:Q7YWU1 OMA:CTICYDI NextBio:892014
Uniprot:Q7YWU1
Length = 275
Score = 144 (55.7 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 12 KRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL--PDMN 69
K + ++D+LC IC+++I E H RC H+FC CI +C+ L KCP C + N
Sbjct: 88 KNSNDLDEDDVLCTICYDIIVEPHTLRCQHSFCKKCIDQCLPLTRKCPSCQQWVYWSRKN 147
Query: 70 SVFPNFLLNELVQKHK 85
+F +L + +K +
Sbjct: 148 KIFKEKVLRWVKEKQR 163
>UNIPROTKB|E9PMW8 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001594 PROSITE:PS50089
PROSITE:PS50216 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736 EMBL:AL513329
EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2 IPI:IPI00979234
ProteinModelPortal:E9PMW8 SMR:E9PMW8 Ensembl:ENST00000491600
ArrayExpress:E9PMW8 Bgee:E9PMW8 Uniprot:E9PMW8
Length = 68
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 20/48 (41%), Positives = 37/48 (77%)
Query: 30 LIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLL 77
+I EA++T+CGH+FC+ CI + +E +CPKC+ + +++ ++PNFL+
Sbjct: 1 MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLV 48
>UNIPROTKB|Q28DL4 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248
KO:K03175 PANTHER:PTHR10131:SF48 EMBL:CR855449 EMBL:BC082342
RefSeq:NP_001008162.2 UniGene:Str.8271 ProteinModelPortal:Q28DL4
SMR:Q28DL4 STRING:Q28DL4 GeneID:493524 KEGG:xtr:493524
Xenbase:XB-GENE-480628 InParanoid:Q641J5 Uniprot:Q28DL4
Length = 558
Score = 126 (49.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSV 71
+ PP ++ CPIC +REA T CGH FC +CI K + + KCP + SL + N +
Sbjct: 61 EFDPPLESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHKCPVDNESLME-NQL 119
Query: 72 FP-NFLLNELV 81
FP NF E++
Sbjct: 120 FPDNFAKREIL 130
Score = 42 (19.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVN 112
L E Q H AQ LR F +S + +PD++
Sbjct: 264 LQEFTQAHMRMMAQT---LRSFSSSVTPTSHMPDIS 296
>UNIPROTKB|E9PJJ9 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00977425 ProteinModelPortal:E9PJJ9 SMR:E9PJJ9
Ensembl:ENST00000531101 ArrayExpress:E9PJJ9 Bgee:E9PJJ9
Uniprot:E9PJJ9
Length = 187
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-------IKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQR-KHLLEAE 128
N+ L +V+K ++ GL+ D + L + DV +M E +Q +H EA
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQSPEH--EAH 129
Query: 129 SSVAQYKLLYE 139
S V + +E
Sbjct: 130 SVVPMEDVAWE 140
>UNIPROTKB|E9PR29 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC090719 HGNC:HGNC:21161
ChiTaRS:TRIM68 IPI:IPI00983538 ProteinModelPortal:E9PR29 SMR:E9PR29
Ensembl:ENST00000533021 ArrayExpress:E9PR29 Bgee:E9PR29
Uniprot:E9PR29
Length = 198
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-------IKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQR-KHLLEAE 128
N+ L +V+K ++ GL+ D + L + DV +M E +Q +H EA
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQSPEH--EAH 129
Query: 129 SSVAQYKLLYE 139
S V + +E
Sbjct: 130 SVVPMEDVAWE 140
>UNIPROTKB|E1B7M2 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:DAAA02055413
IPI:IPI00717514 Ensembl:ENSBTAT00000005888 Uniprot:E1B7M2
Length = 341
Score = 140 (54.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC SCI++ E +KCP C+ + +++ PN+LL
Sbjct: 13 EMICPICLDILQDPATIDCGHNFCLSCITQSGEAADSVLKCPLCN-KIVKRDTITPNWLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+K I++ SD
Sbjct: 72 VNLVEK--IQAMDPSD 85
>DICTYBASE|DDB_G0270568 [details] [associations]
symbol:DDB_G0270568 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0270568 Prosite:PS00518
EMBL:AAFI02000005 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5432
RefSeq:XP_646094.2 ProteinModelPortal:Q55DN7
EnsemblProtists:DDB0201772 GeneID:8617044 KEGG:ddi:DDB_G0270568
InParanoid:Q55DN7 OMA:VPPSFIN ProtClustDB:CLSZ2445168
Uniprot:Q55DN7
Length = 419
Score = 139 (54.0 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
D+ CPIC I E CGH FC C+S+C+ KCP C+ + N ++ N ++
Sbjct: 22 DISCPICLNFIEECSTLSCGHNFCHKCVSECINRNHKCPLCNKTALKEN-IYRNHQFEKI 80
Query: 81 VQKHKIKSAQDSDGLRDFVASESQN 105
++ +I+ + D + S + N
Sbjct: 81 IKIIRIEKEKSKTIYYDNLISGASN 105
>UNIPROTKB|G3MWR7 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104499 EMBL:DAAA02055413 OMA:WEAELQG
Ensembl:ENSBTAT00000062975 Uniprot:G3MWR7
Length = 509
Score = 140 (54.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC SCI++ E +KCP C+ + +++ PN+LL
Sbjct: 13 EMICPICLDILQDPATIDCGHNFCLSCITQSGEAADSVLKCPLCN-KIVKRDTITPNWLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+K I++ SD
Sbjct: 72 VNLVEK--IQAMDPSD 85
>MGI|MGI:102749 [details] [associations]
symbol:Trim25 "tripartite motif-containing 25" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:102749 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0030054 GO:GO:0008270
GO:GO:0045087 GO:GO:0051607 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:AL646096 CTD:7706
eggNOG:NOG253760 HOVERGEN:HBG101063 KO:K10652 OMA:SHINGAT
OrthoDB:EOG42JNRQ EMBL:D63902 EMBL:AK169562 IPI:IPI00122289
PIR:I49642 RefSeq:NP_033572.2 UniGene:Mm.248445
ProteinModelPortal:Q61510 SMR:Q61510 MINT:MINT-240797 STRING:Q61510
PhosphoSite:Q61510 PaxDb:Q61510 PRIDE:Q61510
Ensembl:ENSMUST00000107896 GeneID:217069 KEGG:mmu:217069
GeneTree:ENSGT00700000104271 HOGENOM:HOG000132974 InParanoid:Q5SU70
NextBio:375545 Bgee:Q61510 CleanEx:MM_TRIM25 Genevestigator:Q61510
GermOnline:ENSMUSG00000000275 Uniprot:Q61510
Length = 634
Score = 109 (43.4 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKC 61
+P +L C +C EL +E T CGH FC SC+ + +Q +CP+C
Sbjct: 5 NPLAEELSCSVCLELFKEPVTTPCGHNFCMSCLDETWVVQGPPYRCPQC 53
Score = 36 (17.7 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 59 PKCSASLPDMNSVFPNFLLNELVQ 82
PK SA+ PD V L N L +
Sbjct: 429 PKASAAQPDSVGVKAKVLENFLTK 452
Score = 36 (17.7 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 78 NELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAE 128
N++ +K +A SDGL+ + S Q + L L H E E
Sbjct: 473 NKVSLSNKYTTASVSDGLQHY-RSHPQRFTYCSQVLGLHCYKNGIHYWEVE 522
>UNIPROTKB|F1NNQ7 [details] [associations]
symbol:Gga.54568 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:VKLSALM GeneTree:ENSGT00440000033329 EMBL:AADN02013631
EMBL:AADN02013632 EMBL:AADN02013633 IPI:IPI00592342
Ensembl:ENSGALT00000014392 Uniprot:F1NNQ7
Length = 632
Score = 140 (54.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 14 QHSPPDN----DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD-- 67
QH+P ++ DL C +C L E T CGHTFC C+ +C++ KCP C L +
Sbjct: 324 QHTPFESVDPSDLDCSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPKCPLCKEGLSEQC 383
Query: 68 --MNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
M L+ EL+ K+ + + + + +E NL+
Sbjct: 384 LAMRKYCKTVLMEELIAKYLPEELTERRKIYEEEIAELSNLN 425
>ZFIN|ZDB-GENE-070424-55 [details] [associations]
symbol:ftr61 "finTRIM family, member 61"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070424-55 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862 EMBL:BC134866
IPI:IPI00760180 UniGene:Dr.90118 ProteinModelPortal:A4QN45
NextBio:20889962 Uniprot:A4QN45
Length = 548
Score = 139 (54.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/121 (28%), Positives = 55/121 (45%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFP 73
D + C IC +L+++ I CGH FC SCI+ C L+ CP+C + ++
Sbjct: 7 DQEFSCSICLDLLKDPVILSCGHRFCMSCITDCWNLEDQKRVYSCPQCRQTFTPRPALNK 66
Query: 74 NFLLNELVQKHKIKSAQDSD---GLRDFVASESQNLSLPDVNLMLEVLNQ--RKHLLEAE 128
N +L E+++K K Q +D G D L V L LN + HL + +
Sbjct: 67 NVILTEMLEKLKTTRLQTADCYAGSGDVECDVCTGRKLKAVKSCLVCLNSYCQHHLQQHQ 126
Query: 129 S 129
+
Sbjct: 127 T 127
>ZFIN|ZDB-GENE-040426-745 [details] [associations]
symbol:rad18 "RAD18 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003034 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
Prosite:PS00518 ZFIN:ZDB-GENE-040426-745 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P28990 eggNOG:COG5432
KO:K10627 CTD:56852 HOGENOM:HOG000234845 HOVERGEN:HBG054721
OrthoDB:EOG4RFKTF EMBL:BC044430 IPI:IPI00608781 RefSeq:NP_956431.1
UniGene:Dr.81359 ProteinModelPortal:Q803L3 STRING:Q803L3
GeneID:393106 KEGG:dre:393106 InParanoid:Q803L3 NextBio:20814179
ArrayExpress:Q803L3 Uniprot:Q803L3
Length = 426
Score = 136 (52.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFL 76
P D L CPICFE + + +T+C H FC CI K + ++ CP C++ + + + N L
Sbjct: 18 PMDTLLRCPICFEFLNISMMTQCSHNFCSLCIRKFLSYKLLCPVCNSPSTEQD-LRNNRL 76
Query: 77 LNELVQ 82
L++LVQ
Sbjct: 77 LDDLVQ 82
>ZFIN|ZDB-GENE-090507-8 [details] [associations]
symbol:ftr43 "finTRIM family, member 43" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-090507-8 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 OrthoDB:EOG4R23TJ HOGENOM:HOG000234136
HOVERGEN:HBG106862 eggNOG:NOG319664 EMBL:BC095315 IPI:IPI00510507
RefSeq:NP_001019821.1 UniGene:Dr.114072 ProteinModelPortal:Q503I6
GeneID:553628 KEGG:dre:553628 CTD:553628 InParanoid:Q503I6
NextBio:20880365 Uniprot:Q503I6
Length = 440
Score = 119 (46.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 19 DND-LLCPICFELIREAHITRCGHTFCFSCISKC---VELQ--IKCPKCSASLPDMNSVF 72
D D +CP+C L+++ CGH++C SCI+ C EL+ CP C S ++
Sbjct: 9 DQDQFMCPVCLNLLQDPVTIACGHSYCMSCITDCWNQEELKRIYSCPLCKQSFTPRPALA 68
Query: 73 PNFLLNELVQK 83
N + E+++K
Sbjct: 69 KNVVFAEMLEK 79
Score = 37 (18.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 80 LVQKHK----IKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQ 133
LV +HK + A +F E+Q SL + + L Q + LEA AQ
Sbjct: 177 LVDEHKNHDAVSVAAGRKEKEEFY-EETQKKSLKVIEQREKDLQQLREALEAHKRSAQ 233
>UNIPROTKB|F1MTW9 [details] [associations]
symbol:TRIM35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 GO:GO:0045930 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 CTD:23087 KO:K12012
OMA:ARWTGHR GeneTree:ENSGT00680000099496 EMBL:DAAA02023833
IPI:IPI00692129 RefSeq:XP_002689839.1 RefSeq:XP_596498.2
ProteinModelPortal:F1MTW9 Ensembl:ENSBTAT00000013134 GeneID:518310
KEGG:bta:518310 NextBio:20872625 Uniprot:F1MTW9
Length = 493
Score = 136 (52.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK--CP 59
+A+ PSRS K + LLC +C++ R+A RCGH FC C+++ E+Q+ CP
Sbjct: 6 AASPGPSRSFKEE-------LLCAVCYDPFRDAVTLRCGHNFCRGCVTRSWEVQVAPTCP 58
Query: 60 KCS--ASLPDMNSVFPNFLLNELVQK 83
C A+ D+ + N LN LV+K
Sbjct: 59 VCKDRAAPADLRT---NHTLNNLVEK 81
>UNIPROTKB|B3KUN7 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:CH471161 HOGENOM:HOG000060199 HOVERGEN:HBG081924 EMBL:AL772284
UniGene:Hs.144266 HGNC:HGNC:21152 EMBL:AK097641 IPI:IPI00902452
SMR:B3KUN7 Ensembl:ENST00000422289 UCSC:uc004eqz.3 Uniprot:B3KUN7
Length = 503
Score = 136 (52.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 28/91 (30%), Positives = 42/91 (46%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L N +
Sbjct: 207 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 266
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+ EL+ K + ++ L + E NL+
Sbjct: 267 MEELIAKFLPEELKERRKLYEEEMEELSNLN 297
>UNIPROTKB|H0Y7Q8 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 EMBL:AL772284 HGNC:HGNC:21152
ProteinModelPortal:H0Y7Q8 Ensembl:ENST00000439603 Uniprot:H0Y7Q8
Length = 525
Score = 136 (52.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 28/91 (30%), Positives = 42/91 (46%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L N +
Sbjct: 229 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 288
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+ EL+ K + ++ L + E NL+
Sbjct: 289 MEELIAKFLPEELKERRKLYEEEMEELSNLN 319
>UNIPROTKB|D4A339 [details] [associations]
symbol:Trim47l "Protein Trim47l" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 OMA:RLCKNVI OrthoDB:EOG4R23TJ IPI:IPI00608170
Ensembl:ENSRNOT00000040703 RGD:1311352 Uniprot:D4A339
Length = 623
Score = 126 (49.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 28/88 (31%), Positives = 41/88 (46%)
Query: 14 QHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK------CPKCSASLPD 67
QH D +LCPIC ++ R T CGH FC +C+ + Q CP+C + P
Sbjct: 62 QHLLEDQ-VLCPICLDVFRNPVTTACGHNFCMTCLQSFWDHQADTGETYYCPQCREAFPS 120
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSDGL 95
+ N +L E+V + +Q S L
Sbjct: 121 RPRLCKNVILGEMVACFTLAKSQTSGPL 148
Score = 33 (16.7 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 7 PSRSLKRQHSP 17
P R+++R+ SP
Sbjct: 5 PQRTVRRRRSP 15
>UNIPROTKB|F1LMT9 [details] [associations]
symbol:Trim47l "Protein Trim47l" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 GeneTree:ENSGT00700000104280 RGD:1311352
IPI:IPI00948827 RefSeq:XP_001073650.1 RefSeq:XP_001081685.1
UniGene:Rn.198897 Ensembl:ENSRNOT00000065292 GeneID:287824
KEGG:rno:287824 CTD:287824 NextBio:627093 Uniprot:F1LMT9
Length = 623
Score = 126 (49.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 28/88 (31%), Positives = 41/88 (46%)
Query: 14 QHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK------CPKCSASLPD 67
QH D +LCPIC ++ R T CGH FC +C+ + Q CP+C + P
Sbjct: 62 QHLLEDQ-VLCPICLDVFRNPVTTACGHNFCMTCLQSFWDHQADTGETYYCPQCREAFPS 120
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSDGL 95
+ N +L E+V + +Q S L
Sbjct: 121 RPRLCKNVILGEMVACFTLAKSQTSGPL 148
Score = 33 (16.7 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 7 PSRSLKRQHSP 17
P R+++R+ SP
Sbjct: 5 PQRTVRRRRSP 15
>UNIPROTKB|K7GS78 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Prosite:PS00518 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR015947
SUPFAM:SSF88697 InterPro:IPR017907 GeneTree:ENSGT00440000033329
EMBL:CU928929 Ensembl:ENSSSCT00000036557 Uniprot:K7GS78
Length = 694
Score = 137 (53.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
+TP+ S+ S +DL C +C L E T CGHTFC C+ +C++ KCP C
Sbjct: 384 ATPALSVPLA-SFDASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDG 442
Query: 65 LPDM---NSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L N ++ EL+ K + ++ L + E NL+
Sbjct: 443 LSQCLASRKYSKNVIMEELIAKFLPEELKERRRLYEEEMEELSNLN 488
>UNIPROTKB|K7GKX2 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GeneTree:ENSGT00440000033329 EMBL:CU928929 RefSeq:XP_003360480.1
Ensembl:ENSSSCT00000035094 GeneID:100517799 Uniprot:K7GKX2
Length = 711
Score = 137 (53.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
+TP+ S+ S +DL C +C L E T CGHTFC C+ +C++ KCP C
Sbjct: 401 ATPALSVPLA-SFDASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDG 459
Query: 65 LPDM---NSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L N ++ EL+ K + ++ L + E NL+
Sbjct: 460 LSQCLASRKYSKNVIMEELIAKFLPEELKERRRLYEEEMEELSNLN 505
>UNIPROTKB|K7GLC4 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GeneTree:ENSGT00440000033329 EMBL:CU928929 GeneID:100517799
RefSeq:XP_003135396.2 Ensembl:ENSSSCT00000033278 Uniprot:K7GLC4
Length = 752
Score = 137 (53.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
+TP+ S+ S +DL C +C L E T CGHTFC C+ +C++ KCP C
Sbjct: 442 ATPALSVPLA-SFDASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDG 500
Query: 65 LPDM---NSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L N ++ EL+ K + ++ L + E NL+
Sbjct: 501 LSQCLASRKYSKNVIMEELIAKFLPEELKERRRLYEEEMEELSNLN 546
>UNIPROTKB|F1RU80 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:CU928929
Ensembl:ENSSSCT00000013812 Uniprot:F1RU80
Length = 788
Score = 137 (53.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 5 STPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSAS 64
+TP+ S+ S +DL C +C L E T CGHTFC C+ +C++ KCP C
Sbjct: 442 ATPALSVPLA-SFDASDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDG 500
Query: 65 LPDM---NSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L N ++ EL+ K + ++ L + E NL+
Sbjct: 501 LSQCLASRKYSKNVIMEELIAKFLPEELKERRRLYEEEMEELSNLN 546
>UNIPROTKB|Q6AZZ1 [details] [associations]
symbol:TRIM68 "E3 ubiquitin-protein ligase TRIM68"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IPI] [GO:0035035 "histone
acetyltransferase binding" evidence=IPI] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0060765 "regulation of
androgen receptor signaling pathway" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005794 GO:GO:0048471
EMBL:CH471064 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0060765 InterPro:IPR017907
GO:GO:0051865 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 HSSP:P38398 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG001357 eggNOG:NOG252602
EMBL:AF360739 EMBL:AF439153 EMBL:AK001231 EMBL:AK022923
EMBL:AK291166 EMBL:AK056523 EMBL:AC090719 EMBL:BC075058
EMBL:BC109063 EMBL:AY005802 IPI:IPI00292487 RefSeq:NP_060543.5
UniGene:Hs.523438 UniGene:Hs.738828 ProteinModelPortal:Q6AZZ1
SMR:Q6AZZ1 IntAct:Q6AZZ1 STRING:Q6AZZ1 PhosphoSite:Q6AZZ1
DMDM:74748376 PaxDb:Q6AZZ1 PRIDE:Q6AZZ1 DNASU:55128
Ensembl:ENST00000300747 GeneID:55128 KEGG:hsa:55128 UCSC:uc001lzf.2
CTD:55128 GeneCards:GC11M004577 HGNC:HGNC:21161 HPA:HPA023455
MIM:613184 neXtProt:NX_Q6AZZ1 PharmGKB:PA134939870
InParanoid:Q6AZZ1 KO:K12033 OMA:CYSIGTN OrthoDB:EOG4XSKPR
ChiTaRS:TRIM68 GenomeRNAi:55128 NextBio:58790 ArrayExpress:Q6AZZ1
Bgee:Q6AZZ1 CleanEx:HS_TRIM68 Genevestigator:Q6AZZ1
GermOnline:ENSG00000167333 Uniprot:Q6AZZ1
Length = 485
Score = 134 (52.2 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-------IKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQR-KHLLEAE 128
N+ L +V+K ++ GL+ D + L + DV +M E +Q +H EA
Sbjct: 72 NWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEACSQSPEH--EAH 129
Query: 129 SSVAQYKLLYE 139
S V + +E
Sbjct: 130 SVVPMEDVAWE 140
>UNIPROTKB|B0V1M0 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 UniGene:Hs.493275
HGNC:HGNC:16289 eggNOG:NOG310139 OrthoDB:EOG4K0QNJ EMBL:CR925727
IPI:IPI00892854 SMR:B0V1M0 Ensembl:ENST00000422484 Uniprot:B0V1M0
Length = 248
Score = 128 (50.1 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+K I++ Q S+
Sbjct: 72 RNLVEK--IQALQASE 85
>UNIPROTKB|G3X6C1 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 CTD:79836 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:DAAA02067124
RefSeq:NP_001178063.1 UniGene:Bt.92361 ProteinModelPortal:G3X6C1
Ensembl:ENSBTAT00000003384 GeneID:508189 KEGG:bta:508189
NextBio:20868400 Uniprot:G3X6C1
Length = 759
Score = 136 (52.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 28/91 (30%), Positives = 42/91 (46%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L N +
Sbjct: 463 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+ EL+ K + ++ L + E NL+
Sbjct: 523 MEELIAKFLPEELKERRRLYEEEMEELSNLN 553
>UNIPROTKB|Q496Y0 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
HSSP:Q8IZP6 GO:GO:0004176 eggNOG:COG2802 HOGENOM:HOG000060199
HOVERGEN:HBG081924 EMBL:AK026265 EMBL:AK091777 EMBL:AL772284
EMBL:BC099847 EMBL:BC100671 EMBL:BC103491 IPI:IPI00300753
IPI:IPI00640460 IPI:IPI00827481 RefSeq:NP_001027026.1
RefSeq:NP_079054.3 UniGene:Hs.144266 ProteinModelPortal:Q496Y0
SMR:Q496Y0 IntAct:Q496Y0 PhosphoSite:Q496Y0 DMDM:121949074
PRIDE:Q496Y0 Ensembl:ENST00000304778 Ensembl:ENST00000365713
Ensembl:ENST00000371628 Ensembl:ENST00000481285 GeneID:79836
KEGG:hsa:79836 UCSC:uc004eqw.3 UCSC:uc004eqx.3 CTD:79836
GeneCards:GC0XP118108 HGNC:HGNC:21152 neXtProt:NX_Q496Y0
PharmGKB:PA134900980 InParanoid:Q496Y0 OMA:VKLSALM PhylomeDB:Q496Y0
GenomeRNAi:79836 NextBio:69492 ArrayExpress:Q496Y0 Bgee:Q496Y0
CleanEx:HS_LONRF3 Genevestigator:Q496Y0 Uniprot:Q496Y0
Length = 759
Score = 136 (52.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 28/91 (30%), Positives = 42/91 (46%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L N +
Sbjct: 463 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 522
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+ EL+ K + ++ L + E NL+
Sbjct: 523 MEELIAKFLPEELKERRKLYEEEMEELSNLN 553
>UNIPROTKB|F1PSB6 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:VKLSALM GeneTree:ENSGT00440000033329 EMBL:AAEX03026821
Ensembl:ENSCAFT00000029170 Uniprot:F1PSB6
Length = 765
Score = 136 (52.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 28/91 (30%), Positives = 42/91 (46%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+DL C +C L E T CGHTFC C+ +C++ KCP C L N +
Sbjct: 469 SDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVI 528
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+ EL+ K + ++ L + E NL+
Sbjct: 529 MEELIAKFLPEELKERRRLYEEEMEELSNLN 559
>UNIPROTKB|I7GGX8 [details] [associations]
symbol:TRIM31 "Tripartite motif protein 31 isoform beta"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00700000104499
EMBL:CT737425 EMBL:AB158487 UniGene:Ssc.26008 UniGene:Ssc.83065
ProteinModelPortal:I7GGX8 Ensembl:ENSSSCT00000035521 Uniprot:I7GGX8
Length = 411
Score = 132 (51.5 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQ--IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH+FC CI + E L IKCP C+ + +++ PN+LL
Sbjct: 13 EVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCN-KIVKRDTIRPNWLL 71
Query: 78 NELVQK 83
LV+K
Sbjct: 72 VNLVEK 77
>MGI|MGI:2385051 [details] [associations]
symbol:Trim31 "tripartite motif-containing 31" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:2385051 Prosite:PS00518 GO:GO:0005739
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:CH466559 HOGENOM:HOG000234133
CTD:11074 eggNOG:NOG310139 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EMBL:AK033650 EMBL:BC026666 IPI:IPI00153211 RefSeq:NP_666189.1
UniGene:Mm.213417 HSSP:Q92021 ProteinModelPortal:Q8R0K2 SMR:Q8R0K2
STRING:Q8R0K2 PRIDE:Q8R0K2 Ensembl:ENSMUST00000078438 GeneID:224762
KEGG:mmu:224762 UCSC:uc008cll.1 GeneTree:ENSGT00700000104499
InParanoid:Q8R0K2 NextBio:377349 Bgee:Q8R0K2 Uniprot:Q8R0K2
Length = 507
Score = 133 (51.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVEL--QIKCPKCSASLPDMNSVFPNFLLN 78
++ CPIC E++++ CGH FC CIS+ + +I+CP C S+ + N+ PN LL
Sbjct: 13 EVTCPICMEILQDPVTIDCGHNFCLQCISQVGKTSEKIQCPLCKLSV-NKNTFRPNKLLA 71
Query: 79 ELVQKHKIKSAQDSD 93
L +K I+S +D
Sbjct: 72 SLAEK--IQSMDPAD 84
>UNIPROTKB|K7GL56 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00530000063064 EMBL:CU019565
Ensembl:ENSSSCT00000035939 Uniprot:K7GL56
Length = 206
Score = 124 (48.7 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCP 59
A++TP R+L+R+ P P C +C E++ TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRGDPALPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>UNIPROTKB|A7XUJ6 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9823 "Sus scrofa" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0046849 "bone remodeling" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0031666
"positive regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005938 GO:GO:0005634 GO:GO:0007165
GO:GO:0042981 GO:GO:0005811 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:EU095967
RefSeq:NP_001098756.1 UniGene:Ssc.96412 ProteinModelPortal:A7XUJ6
SMR:A7XUJ6 STRING:A7XUJ6 Ensembl:ENSSSCT00000014516
Ensembl:ENSSSCT00000033074 GeneID:396629 KEGG:ssc:396629
Uniprot:A7XUJ6
Length = 541
Score = 119 (46.9 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSV 71
+ PP ++ CPIC +REA T CGH FC +CI K + + KCP + L + N +
Sbjct: 60 EFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE-NQL 118
Query: 72 FP-NFLLNELV 81
FP NF E++
Sbjct: 119 FPDNFAKREIL 129
Score = 36 (17.7 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 13/33 (39%), Positives = 13/33 (39%)
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLSLP 109
L E Q H AQ GL VA Q LP
Sbjct: 263 LQENTQSHMRMMAQALQGLSLAVAPVPQRDMLP 295
>UNIPROTKB|F1NGM4 [details] [associations]
symbol:TRIM35 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0008285 GO:GO:0006917
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 GO:GO:0045930 InterPro:IPR006574
SMART:SM00589 GeneTree:ENSGT00680000099496 EMBL:AADN02018387
EMBL:AADN02018388 IPI:IPI00588433 Ensembl:ENSGALT00000026786
OMA:HEEANLF Uniprot:F1NGM4
Length = 477
Score = 132 (51.5 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 31/70 (44%), Positives = 39/70 (55%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQIKCPKC--SASLPDMNSVF 72
+P +LLCPIC+E REA CGH FC CIS+ E Q CP C ++S D+
Sbjct: 5 APFKEELLCPICYEPFREAVTLCCGHNFCKGCISRSWEHRQHTCPVCKETSSFDDLRI-- 62
Query: 73 PNFLLNELVQ 82
N LN LV+
Sbjct: 63 -NHTLNNLVE 71
>UNIPROTKB|K7GRY7 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104499
EMBL:CT737425 Ensembl:ENSSSCT00000035216 Uniprot:K7GRY7
Length = 544
Score = 132 (51.5 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQ--IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH+FC CI + E L IKCP C+ + +++ PN+LL
Sbjct: 13 EVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCN-KIVKRDTIRPNWLL 71
Query: 78 NELVQK 83
LV+K
Sbjct: 72 VNLVEK 77
>UNIPROTKB|B6ICU7 [details] [associations]
symbol:TRIM31 "Tripartite motif-containing protein 31"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 CTD:11074 eggNOG:NOG310139 HOVERGEN:HBG083771
KO:K12011 OrthoDB:EOG4K0QNJ GeneTree:ENSGT00700000104499
EMBL:CT737425 EMBL:AP009553 RefSeq:XP_001928015.3
Ensembl:ENSSSCT00000001348 GeneID:100154496 KEGG:ssc:100154496
OMA:HDSITET Uniprot:B6ICU7
Length = 576
Score = 132 (51.5 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQ--IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH+FC CI + E L IKCP C+ + +++ PN+LL
Sbjct: 13 EVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCN-KIVKRDTIRPNWLL 71
Query: 78 NELVQK 83
LV+K
Sbjct: 72 VNLVEK 77
>UNIPROTKB|F1RYH5 [details] [associations]
symbol:TRIM31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:11074 KO:K12011 GeneTree:ENSGT00700000104499 EMBL:CU607067
RefSeq:NP_001193331.1 UniGene:Ssc.26008 UniGene:Ssc.83065
Ensembl:ENSSSCT00000001357 GeneID:100154124 KEGG:ssc:100154124
OMA:WEAELQG Uniprot:F1RYH5
Length = 576
Score = 132 (51.5 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVE-LQ--IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH+FC CI + E L IKCP C+ + +++ PN+LL
Sbjct: 13 EVICPICMDILQDPATIDCGHSFCLQCIMRSREGLDSVIKCPLCN-KIVKRDTIRPNWLL 71
Query: 78 NELVQK 83
LV+K
Sbjct: 72 VNLVEK 77
>ZFIN|ZDB-GENE-070912-227 [details] [associations]
symbol:ftr05 "finTRIM family, member 5"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-227 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:BX572635 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00513408
Ensembl:ENSDART00000146444 OMA:ERTRCEV Uniprot:B0S721
Length = 292
Score = 110 (43.8 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C IC +L+++ CGH+FC SCIS + CP+C + + NF+L
Sbjct: 16 CSICLDLLKDPAAIPCGHSFCMSCISGYWDQDEQKGVYSCPQCRQTFTPRPVLGKNFILT 75
Query: 79 ELVQ---KHKIKSAQ 90
E+V+ K K+++A+
Sbjct: 76 EVVENIRKTKLQAAR 90
Score = 35 (17.4 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 116 EVLNQRKHLLEAESSVAQ 133
E ++KHL E++S + Q
Sbjct: 193 ERAEKQKHLKESQSKLQQ 210
>RGD|1562137 [details] [associations]
symbol:Lonrf2 "LON peptidase N-terminal domain and ring finger
2" species:10116 "Rattus norvegicus" [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
Pfam:PF02190 PROSITE:PS50089 SMART:SM00184 RGD:1562137
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:KVMCEVL OrthoDB:EOG4BK538 GeneTree:ENSGT00440000033329
IPI:IPI00362200 Ensembl:ENSRNOT00000033964 UCSC:RGD:1562137
Uniprot:D3ZX48
Length = 517
Score = 131 (51.2 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 33/114 (28%), Positives = 51/114 (44%)
Query: 3 ATSTPSRSLKRQHSPPD-----NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK 57
A S+P R+ P+ D C +C L+ E T CGHTFC C+ +C++
Sbjct: 186 ADSSPQRNANSLEEEPEFTIDATDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPH 245
Query: 58 CPKCSASLPDMNSVFPNF----LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
CP C L ++ + NF L EL+ ++ D + D SE +L+
Sbjct: 246 CPLCKDKLSELLAT-RNFNVTVLTEELIFRYLPDELSDRKRVYDEEMSELSHLT 298
>UNIPROTKB|E1BJY5 [details] [associations]
symbol:RNF125 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GeneTree:ENSGT00530000063064 CTD:54941 KO:K12170
OMA:RTRCGHV EMBL:DAAA02056451 IPI:IPI00717546 RefSeq:NP_001192788.1
UniGene:Bt.51849 ProteinModelPortal:E1BJY5
Ensembl:ENSBTAT00000004048 GeneID:519541 KEGG:bta:519541
NextBio:20872894 Uniprot:E1BJY5
Length = 232
Score = 124 (48.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCP 59
A++TP R+L+R+ P P C +C E++ TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRGDPELPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>UNIPROTKB|F1SAL7 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GeneTree:ENSGT00530000063064
KO:K12170 OMA:RTRCGHV EMBL:CU019565 RefSeq:XP_003127936.2
Ensembl:ENSSSCT00000004129 GeneID:100517591 KEGG:ssc:100517591
Uniprot:F1SAL7
Length = 232
Score = 124 (48.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCP 59
A++TP R+L+R+ P P C +C E++ TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASATP-RALERRGDPALPVTSFDCSVCLEVLHHPVRTRCGHVFCRSCIATSLKNNKWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>UNIPROTKB|E1C7S4 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 EMBL:AADN02026109
IPI:IPI00578516 RefSeq:XP_415709.2 ProteinModelPortal:E1C7S4
Ensembl:ENSGALT00000001270 GeneID:417461 KEGG:gga:417461
OMA:MARKMSI NextBio:20820753 Uniprot:E1C7S4
Length = 492
Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI-SKCVEL--QIKCPKCSASLPDMNSVFPNF 75
++ LLCPIC E+ +E + +CGH++C SC+ S EL Q+ CP C S+ D ++ PN
Sbjct: 11 EDQLLCPICLEVFKEPLMLQCGHSYCKSCVLSLSGELDEQLLCPVCRKSV-DCSASPPNV 69
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLSL 108
L +++ ++S +++ + + LSL
Sbjct: 70 TLARIIEA--LQSRGETEPTPESCPTHDNPLSL 100
>ZFIN|ZDB-GENE-101021-4 [details] [associations]
symbol:lonrf1 "LON peptidase N-terminal domain and
ring finger 1" species:7955 "Danio rerio" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-101021-4 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:FP016207 EMBL:FP085387
EMBL:FP101912 IPI:IPI00998181 Ensembl:ENSDART00000109935
Bgee:F1QKK1 Uniprot:F1QKK1
Length = 605
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM--NSVF-PNFL 76
+D CP+C L E T CGHTFC +CI + ++ ++CP C L + N + P L
Sbjct: 311 SDFECPLCIRLFYEPVTTPCGHTFCKNCIERSLDHNLRCPLCKQPLQEYFKNRKYNPTVL 370
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L E++ + + + + + +E NL+
Sbjct: 371 LQEIMSRLFPQQLAERKQVHEAEMAELSNLT 401
Score = 107 (42.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLP--DMNSVFPNFLLNE 79
L CPIC L+ E CGH+FC C+ L +CP C L D ++ N LL
Sbjct: 2 LECPICLFLMCEPMTMSCGHSFCRRCMGAF--LPSRCPTCKERLKQRDAKNIKNNVLLFS 59
Query: 80 LVQK----------H---KIKSAQDSDGLRDFVASESQNLSLPDVNL 113
+++K H K+K+++ ++ LR +A E ++ DV+L
Sbjct: 60 IIEKCCPEETKMKCHIQEKLKTSEFTEALR--IADEGIEMAPDDVSL 104
>FB|FBgn0032660 [details] [associations]
symbol:elfless "elfless" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
EMBL:AE014134 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000010318
FlyBase:FBgn0032660 EMBL:BT072897 RefSeq:NP_001163003.1
RefSeq:NP_609860.2 UniGene:Dm.19846 SMR:Q9VJB0 IntAct:Q9VJB0
MINT:MINT-797819 STRING:Q9VJB0 EnsemblMetazoa:FBtr0302030
EnsemblMetazoa:FBtr0302031 GeneID:35076 KEGG:dme:Dmel_CG15150
UCSC:CG15150-RA CTD:35076 eggNOG:NOG319336 InParanoid:Q9VJB0
OrthoDB:EOG4FXPR8 GenomeRNAi:35076 NextBio:791733 Uniprot:Q9VJB0
Length = 229
Score = 123 (48.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 5 STPSRSLKRQHSPPDNDLL---CPICFELIREAH--ITRCGHTFCFSCISKCVELQIKCP 59
S P++ +K +L CP+C E +RE T CGH FC +CI + V+ CP
Sbjct: 156 SPPNKRIKSDDEESKKSVLPYNCPVCLEDVREKLPVSTNCGHVFCKACIKRAVDTGRVCP 215
Query: 60 KCSASLPDMNSVF 72
C P+ + +F
Sbjct: 216 LCGVDEPEFHRIF 228
>ZFIN|ZDB-GENE-070912-195 [details] [associations]
symbol:ftr11 "finTRIM family, member 11"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-195 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 EMBL:BX005083 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 eggNOG:NOG253021
OrthoDB:EOG4R23TJ GeneTree:ENSGT00670000097622 HOGENOM:HOG000234136
HOVERGEN:HBG106862 EMBL:BC154553 IPI:IPI00491896
RefSeq:XP_003197971.1 UniGene:Dr.114000 SMR:A8WG25
Ensembl:ENSDART00000005767 GeneID:569723 KEGG:dre:569723 CTD:569723
OMA:RITNTES NextBio:20889815 Uniprot:A8WG25
Length = 546
Score = 117 (46.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIK-----CPKCSASLPDMNSVFPNFLLN 78
C IC +L++++ CGH++C SCIS C + + CP+C S ++ N +L
Sbjct: 15 CSICLDLLKDSVAIPCGHSYCMSCISDCWDQDERKGVYSCPQCRQSFTPRPALGKNTMLT 74
Query: 79 ELVQKHKIKSAQDSD 93
E+++ + + Q D
Sbjct: 75 EVMENIRKRKLQAGD 89
Score = 35 (17.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 111 VNLMLEVLNQRKHLLEAESSVAQY 134
VN L VL+++ ++E V QY
Sbjct: 382 VNTSL-VLSKKNRVIEYTDKVQQY 404
>UNIPROTKB|Q96EQ8 [details] [associations]
symbol:RNF125 "E3 ubiquitin-protein ligase RNF125"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0008270 GO:GO:0045087
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0032480 HOGENOM:HOG000230946 EMBL:AK000463
EMBL:BC012021 IPI:IPI00410652 RefSeq:NP_060301.2 UniGene:Hs.633703
ProteinModelPortal:Q96EQ8 SMR:Q96EQ8 IntAct:Q96EQ8 STRING:Q96EQ8
PhosphoSite:Q96EQ8 DMDM:143811449 PRIDE:Q96EQ8
Ensembl:ENST00000217740 GeneID:54941 KEGG:hsa:54941 UCSC:uc002kxf.1
CTD:54941 GeneCards:GC18P029598 H-InvDB:HIX0014384 HGNC:HGNC:21150
HPA:HPA041514 MIM:610432 neXtProt:NX_Q96EQ8 PharmGKB:PA134950383
eggNOG:NOG46770 HOVERGEN:HBG098958 InParanoid:Q96EQ8 KO:K12170
OMA:RTRCGHV OrthoDB:EOG4SJ5FM PhylomeDB:Q96EQ8 GenomeRNAi:54941
NextBio:58082 Bgee:Q96EQ8 CleanEx:HS_RNF125 Genevestigator:Q96EQ8
GermOnline:ENSG00000101695 Uniprot:Q96EQ8
Length = 232
Score = 123 (48.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 5 STPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCPKC 61
S +R+L+R+ P P C +C E++ + TRCGH FC SCI+ ++ + CP C
Sbjct: 16 SATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYC 75
Query: 62 SASLP 66
A LP
Sbjct: 76 RAYLP 80
>ZFIN|ZDB-GENE-040813-1 [details] [associations]
symbol:rnf114 "ring finger protein 114" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Prosite:PS00518 Pfam:PF05605
ZFIN:ZDB-GENE-040813-1 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OMA:IEHIQRR OrthoDB:EOG4CVG7Q
EMBL:CR759920 EMBL:BC079515 EMBL:AY609381 IPI:IPI00508716
RefSeq:NP_001001828.2 UniGene:Dr.86280 Ensembl:ENSDART00000019667
GeneID:414843 KEGG:dre:414843 InParanoid:Q6J0N1 NextBio:20818739
Uniprot:Q6J0N1
Length = 221
Score = 122 (48.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D+D +CP+C E+ T+CGHTFC C+ +C+ Q P C+ D+ + L
Sbjct: 17 DDDFVCPVCLEIFVRPMTTQCGHTFCNDCLQECLRPQ--SPVCAVCRTDLRKWAKDDHLQ 74
Query: 79 ELVQK 83
+L+++
Sbjct: 75 DLMKR 79
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 104 (41.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 20 NDLLCPICFELIREAHITR-CGHTFCFSCISKCVELQIK-CPKCSASLPDMNSVFPNFLL 77
++L+CPIC ++++ T+ C H FC CI + K CP C L S+ P+
Sbjct: 43 SELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNF 102
Query: 78 NELVQK 83
+ L+ K
Sbjct: 103 DALISK 108
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 81 VQKHKIKSAQDS-DGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYE 139
V+KH+ +S + G D S S ++S P V+ E RK +E S A+ L +E
Sbjct: 155 VRKHQHESDNTTFSGGEDNCDSRS-HVSNPSVHSNQEAGPSRKRSRASEDSGAEPDLSHE 213
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 104 (41.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 20 NDLLCPICFELIREAHITR-CGHTFCFSCISKCVELQIK-CPKCSASLPDMNSVFPNFLL 77
++L+CPIC ++++ T+ C H FC CI + K CP C L S+ P+
Sbjct: 44 SELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNF 103
Query: 78 NELVQK 83
+ L+ K
Sbjct: 104 DALISK 109
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 81 VQKHKIKSAQDS-DGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQYKLLYE 139
V+KH+ +S + G D S S ++S P V+ E RK +E S A+ L +E
Sbjct: 156 VRKHQHESDNTTFSGGEDNCDSRS-HVSNPSVHSNQEAGPSRKRSRASEDSGAEPDLSHE 214
>UNIPROTKB|A6NI17 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX088647 HOGENOM:HOG000234133 EMBL:BX005441
EMBL:CR759838 HGNC:HGNC:16289 eggNOG:NOG310139 HOVERGEN:HBG083771
EMBL:BX897730 EMBL:CR759801 EMBL:CT009552 IPI:IPI00744105
SMR:A6NI17 Ensembl:ENST00000546863 Ensembl:ENST00000550119
Ensembl:ENST00000550679 Uniprot:A6NI17
Length = 425
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+K I++ Q S+
Sbjct: 72 RNLVEK--IQALQASE 85
>UNIPROTKB|C9JJD5 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX322644 HGNC:HGNC:16289 eggNOG:NOG310139
IPI:IPI01022309 ProteinModelPortal:C9JJD5 SMR:C9JJD5
Ensembl:ENST00000550348 Uniprot:C9JJD5
Length = 425
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+K I++ Q S+
Sbjct: 72 RNLVEK--IQALQASE 85
>UNIPROTKB|E7ETS6 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR753815 HGNC:HGNC:16289 IPI:IPI01021215
ProteinModelPortal:E7ETS6 SMR:E7ETS6 Ensembl:ENST00000552122
ArrayExpress:E7ETS6 Uniprot:E7ETS6
Length = 425
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+K I++ Q S+
Sbjct: 72 RNLVEK--IQALQASE 85
>UNIPROTKB|F8W1J7 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 IPI:IPI01021230
ProteinModelPortal:F8W1J7 SMR:F8W1J7 Ensembl:ENST00000550336
Uniprot:F8W1J7
Length = 425
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+K I++ Q S+
Sbjct: 72 RNLVEK--IQALQASE 85
>UNIPROTKB|G8JLN1 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL671859 HGNC:HGNC:16289 SMR:G8JLN1
Ensembl:ENST00000455349 Ensembl:ENST00000552059 Uniprot:G8JLN1
Length = 425
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+K I++ Q S+
Sbjct: 72 RNLVEK--IQALQASE 85
>UNIPROTKB|Q9BZY9 [details] [associations]
symbol:TRIM31 "E3 ubiquitin-protein ligase TRIM31"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005739 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL669914 EMBL:AL671859 EMBL:CR753815
EMBL:AF230386 EMBL:AF230387 EMBL:BT006675 EMBL:AK222729
EMBL:BX322644 EMBL:BC016866 EMBL:BC017017 EMBL:Y07828
IPI:IPI00292397 IPI:IPI00292398 RefSeq:NP_008959.3
UniGene:Hs.493275 PDB:2YSJ PDB:2YSL PDBsum:2YSJ PDBsum:2YSL
ProteinModelPortal:Q9BZY9 SMR:Q9BZY9 IntAct:Q9BZY9 STRING:Q9BZY9
DMDM:68068082 PRIDE:Q9BZY9 DNASU:11074 Ensembl:ENST00000357569
Ensembl:ENST00000376734 Ensembl:ENST00000433864
Ensembl:ENST00000445679 Ensembl:ENST00000449412
Ensembl:ENST00000453266 Ensembl:ENST00000540829
Ensembl:ENST00000547935 Ensembl:ENST00000550451
Ensembl:ENST00000551027 Ensembl:ENST00000552274
Ensembl:ENST00000552311 GeneID:11074 KEGG:hsa:11074 UCSC:uc003npg.1
CTD:11074 GeneCards:GC06M030073 H-InvDB:HIX0005686
H-InvDB:HIX0166392 HGNC:HGNC:16289 HPA:HPA046400 MIM:609316
neXtProt:NX_Q9BZY9 PharmGKB:PA38117 eggNOG:NOG310139
HOVERGEN:HBG083771 KO:K12011 OMA:EFQFLNP OrthoDB:EOG4K0QNJ
EvolutionaryTrace:Q9BZY9 GenomeRNAi:11074 NextBio:42098
ArrayExpress:Q9BZY9 Bgee:Q9BZY9 Genevestigator:Q9BZY9
GermOnline:ENSG00000204616 Uniprot:Q9BZY9
Length = 425
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ---IKCPKCSASLPDMNSVFPNFLL 77
+++CPIC +++++ CGH FC CI++ E KCP C S+ N++ N LL
Sbjct: 13 EVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK-NAIRFNSLL 71
Query: 78 NELVQKHKIKSAQDSD 93
LV+K I++ Q S+
Sbjct: 72 RNLVEK--IQALQASE 85
>ASPGD|ASPL0000065492 [details] [associations]
symbol:uvsH species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006312 "mitotic
recombination" evidence=IMP] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0031144
"proteasome localization" evidence=IEA] [GO:0006301
"postreplication repair" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003034 InterPro:IPR004580
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003684
GO:GO:0016874 GO:GO:0008270 GO:GO:0006281 GO:GO:0016567
EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AACD01000127 eggNOG:COG5432 KO:K10627
TIGRFAMs:TIGR00599 EMBL:S79392 EMBL:Z49875 EMBL:Z49834 PIR:S55494
PIR:S57328 RefSeq:XP_680578.1 ProteinModelPortal:Q02398
STRING:Q02398 EnsemblFungi:CADANIAT00000127 GeneID:2869846
KEGG:ani:AN7309.2 HOGENOM:HOG000168108 OMA:YICKEFF
OrthoDB:EOG4F4WMB Uniprot:Q02398
Length = 443
Score = 128 (50.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF 75
+P + L C +C + IT C HTFC CI +C+ + KCP C +S ++ + N+
Sbjct: 22 APFETSLRCQVCKDFFDNPVITSCSHTFCSLCIRRCLSTEGKCPTCRSSDQELK-LRRNW 80
Query: 76 LLNELVQKHK 85
++ ELV+ K
Sbjct: 81 VVQELVEGFK 90
>ZFIN|ZDB-GENE-060810-140 [details] [associations]
symbol:trim105 "tripartite motif containing 105"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-060810-140 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104222 OMA:VEPMRIC EMBL:CR627495
IPI:IPI00993660 Ensembl:ENSDART00000080247 ArrayExpress:F1QCZ4
Bgee:F1QCZ4 Uniprot:F1QCZ4
Length = 426
Score = 127 (49.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 28/75 (37%), Positives = 38/75 (50%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCIS---KCVELQIKCPKCSASLPDMNSVFPNFLL 77
DL C ICFEL +E + C H FC CI K V + CP+C P+ N+L+
Sbjct: 13 DLTCAICFELFKEPVMLGCMHHFCRRCIVSYWKSVRSPVTCPQCRQEFPNKCCFQTNYLV 72
Query: 78 NELVQKHKIKSAQDS 92
LV+K + S+ S
Sbjct: 73 ANLVEKVRASSSPAS 87
>UNIPROTKB|F1PFH1 [details] [associations]
symbol:LOC483307 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
GeneTree:ENSGT00700000104280 EMBL:AAEX03006301
Ensembl:ENSCAFT00000007593 OMA:CMEPLMG Uniprot:F1PFH1
Length = 615
Score = 129 (50.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 40/135 (29%), Positives = 59/135 (43%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCPIC E+ R T CGH FC +C+ + Q + CP+C S P +
Sbjct: 55 EDQVLCPICLEVFRNPVTTACGHNFCMTCLQGFWDYQATAGETLYCPQCRESFPSRPRLC 114
Query: 73 PNFLLNELV------QKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQ--RKHL 124
N +L E+V + + S+Q G RD L V L+ + KHL
Sbjct: 115 KNAILEEMVTCFTQAKDQTLGSSQILAGPRDVPCDFCSPQKLKSVKSCLQCMASLCEKHL 174
Query: 125 LEA-ESSVAQ-YKLL 137
E V Q ++LL
Sbjct: 175 RSHFEDQVFQDHQLL 189
>UNIPROTKB|Q1LZH3 [details] [associations]
symbol:LOC526787 "LOC526787 protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00700000104280
EMBL:DAAA02049532 OMA:RLCKNVI EMBL:BC115998 IPI:IPI00692594
UniGene:Bt.61444 Ensembl:ENSBTAT00000037969 eggNOG:NOG253021
HOGENOM:HOG000133081 HOVERGEN:HBG085919 InParanoid:Q1LZH3
OrthoDB:EOG4R23TJ Uniprot:Q1LZH3
Length = 616
Score = 129 (50.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCP+C E+ R T CGH FC SC+ + Q + CP+C S P +
Sbjct: 57 EDQVLCPVCLEVFRNPVTTACGHNFCMSCLQGFWDYQATMGEPLYCPQCRESFPTRPRLC 116
Query: 73 PNFLLNELV 81
N +L E+V
Sbjct: 117 KNVILEEMV 125
>ZFIN|ZDB-GENE-081104-397 [details] [associations]
symbol:lonrf1l "LON peptidase N-terminal domain and
ring finger 1, like" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-081104-397
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:CR786572
EMBL:CU468725 EMBL:CU856174 IPI:IPI00996938 RefSeq:XP_003199128.1
UniGene:Dr.116034 Ensembl:ENSDART00000144516 GeneID:100317496
KEGG:dre:100317496 CTD:100317496 Uniprot:F1QJQ0
Length = 751
Score = 130 (50.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/120 (27%), Positives = 55/120 (45%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPD--------MNSV 71
ND C +C L + T CGHTFC +C+ +C++ +CP C SL + + V
Sbjct: 453 NDFECSLCMRLFYQPVTTPCGHTFCTNCLERCLDHNPQCPLCKESLKEYLAFRKYTVTQV 512
Query: 72 FPNFLLNELVQKH--KIK-SAQDSDGLRDFVASESQ---NLSLPDVNLMLEVLNQRKHLL 125
N + L ++H ++K A+++ L D + ++ P V L V R L+
Sbjct: 513 LDNIIKQHLPKEHSERVKLHAEETKELSDLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLM 572
>MGI|MGI:1921615 [details] [associations]
symbol:Lonrf3 "LON peptidase N-terminal domain and ring
finger 3" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 MGI:MGI:1921615 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802
HOGENOM:HOG000060199 HOVERGEN:HBG081924 CTD:79836 EMBL:AK016522
EMBL:AL450395 EMBL:BC120688 EMBL:BC120690 IPI:IPI00137246
RefSeq:NP_083170.1 UniGene:Mm.327654 HSSP:Q13049
ProteinModelPortal:Q9D4H7 SMR:Q9D4H7 PhosphoSite:Q9D4H7
PRIDE:Q9D4H7 Ensembl:ENSMUST00000016383 GeneID:74365 KEGG:mmu:74365
UCSC:uc009sxm.1 GeneTree:ENSGT00440000033329 InParanoid:Q9D4H7
OrthoDB:EOG4RXXZM NextBio:340559 Bgee:Q9D4H7 CleanEx:MM_LONRF3
Genevestigator:Q9D4H7 Uniprot:Q9D4H7
Length = 753
Score = 130 (50.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 29/92 (31%), Positives = 42/92 (45%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCS----ASLPDMNSVFPNF 75
+DL C +C L E T CGHTFC C+ +C++ KCP C LP N
Sbjct: 457 SDLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVLLQCLPS-RKYSKNV 515
Query: 76 LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+L EL+ + ++ L + E NL+
Sbjct: 516 ILEELIATFLPEEFKERKRLYEEEMEELSNLN 547
>UNIPROTKB|C9JWC5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00657693 ProteinModelPortal:C9JWC5 SMR:C9JWC5 STRING:C9JWC5
Ensembl:ENST00000454828 UCSC:uc009yet.2 ArrayExpress:C9JWC5
Bgee:C9JWC5 Uniprot:C9JWC5
Length = 305
Score = 109 (43.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-------KCPKCSASLPDMNSV 71
+ ++ CPIC EL+ E CGH+FC +CI+ ++ + CP C N +
Sbjct: 10 EKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN-L 68
Query: 72 FPNFLLNELVQKHK-IKSAQDSDGLRDFVASESQNLSL 108
PN L +V++ K +K + RD + L +
Sbjct: 69 RPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQI 106
Score = 33 (16.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 108 LPDVNLMLEVLNQ 120
+PD++ ML+VL +
Sbjct: 248 VPDLSGMLQVLKE 260
>ZFIN|ZDB-GENE-030131-8303 [details] [associations]
symbol:si:ch1073-440b2.1 "si:ch1073-440b2.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR007110 InterPro:IPR011990
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50835 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-030131-8303 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:CU459183 EMBL:CU915565 IPI:IPI00836275
Ensembl:ENSDART00000129204 Uniprot:E7EYP4
Length = 488
Score = 127 (49.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 19 DN-DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPN 74
DN D C +C L E T CGHTFC C+ +C++ CP C +L + +
Sbjct: 189 DNADFECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPNCPLCKENLSEYLATRAYCKT 248
Query: 75 FLLNELVQKH 84
L+ EL+Q++
Sbjct: 249 LLIEELLQQY 258
>RGD|1308607 [details] [associations]
symbol:Trim31 "tripartite motif-containing 31" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 RGD:1308607
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 OrthoDB:EOG4K0QNJ
GeneTree:ENSGT00700000104499 IPI:IPI00768380
Ensembl:ENSRNOT00000061558 UCSC:RGD:1308607 Uniprot:D3ZN56
Length = 508
Score = 127 (49.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPNFLLN 78
D+ CPIC E++++ CGH FC CI++ + I CP C S+ N+ PN LL
Sbjct: 13 DVTCPICLEILQDPVTIDCGHNFCLKCINQIGKTSENILCPLCKCSV-SKNTFRPNKLLA 71
Query: 79 ELVQK 83
L +K
Sbjct: 72 SLAEK 76
>UNIPROTKB|F1STF3 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000033329 EMBL:CU856636
Ensembl:ENSSSCT00000008954 Uniprot:F1STF3
Length = 545
Score = 127 (49.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF----L 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF L
Sbjct: 456 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKEKLSELLAS-RNFNITTL 514
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D +E NL+
Sbjct: 515 AEELILRYLSDELSDRKRIYDEEMTELSNLT 545
>ZFIN|ZDB-GENE-030616-265 [details] [associations]
symbol:si:busm1-182n13.1 "si:busm1-182n13.1"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-030616-265 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
EMBL:AL662880 eggNOG:KOG2177 OrthoDB:EOG4R23TJ HOGENOM:HOG000234136
HOVERGEN:HBG106862 IPI:IPI00486925 ProteinModelPortal:Q8AW34
InParanoid:Q8AW34 OMA:ECFCEND Uniprot:Q8AW34
Length = 190
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNF 75
+ +CP+C +L+++ CGH++C +CI+ C + + C +C + ++ N
Sbjct: 10 EFMCPVCLDLLKDPVTIPCGHSYCKTCITGCWDQEDDKRVYSCSQCREAFNPRPALAKNT 69
Query: 76 LLNELVQKHKIKSAQD 91
+L E+V+K K K D
Sbjct: 70 ILAEMVEKLKTKPPAD 85
>DICTYBASE|DDB_G0269614 [details] [associations]
symbol:DDB_G0269614 "tetratricopeptide-like helical
domain-containing protein (TPR)" species:44689 "Dictyostelium
discoideum" [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 dictyBase:DDB_G0269614 Pfam:PF00097 Prosite:PS00518
EMBL:AAFI02000005 GO:GO:0045335 GO:GO:0046872 GO:GO:0008270
eggNOG:COG0457 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR013105 Pfam:PF07719
InterPro:IPR017907 RefSeq:XP_646116.5 ProteinModelPortal:Q55DL5
EnsemblProtists:DDB0237971 GeneID:8617065 KEGG:ddi:DDB_G0269614
OMA:FTIRAIC Uniprot:Q55DL5
Length = 436
Score = 125 (49.1 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 19 DNDLL-CPICFELIREAHITRCGHTFCFSCISKCVELQI-KCPKCSASLPDMNSVFPNFL 76
D++LL CPIC + +A T CGHTFC C++ C+E + KCP CS D + V P F
Sbjct: 7 DSELLSCPICADTFVDACDTGCGHTFCDFCLNSCLENRPDKCPVCSK---DPSPVHPAFT 63
Query: 77 LNEL 80
+ +
Sbjct: 64 IRAI 67
>ZFIN|ZDB-GENE-080218-19 [details] [associations]
symbol:ftr46 "finTRIM family, member 46"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-080218-19
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00670000097622
EMBL:CABZ01034857 IPI:IPI00935014 Ensembl:ENSDART00000101232
Uniprot:F1Q9G0
Length = 390
Score = 124 (48.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKC--VELQIK---CPKCSASLPDMNSVFPN 74
N +CP+C +L+++ CGH++C SCI+ C E Q + CP C S ++ N
Sbjct: 11 NQFMCPVCLDLLQDPVTIPCGHSYCMSCITDCWNQEEQKRIYSCPLCKQSFTPRPALAKN 70
Query: 75 FLLNELVQK 83
+L E+++K
Sbjct: 71 VVLAEMLEK 79
>UNIPROTKB|J9PBI0 [details] [associations]
symbol:RNF125 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 GeneTree:ENSGT00530000063064
CTD:54941 KO:K12170 OMA:RTRCGHV EMBL:AAEX03005423
RefSeq:XP_547620.3 Ensembl:ENSCAFT00000044835 GeneID:490498
KEGG:cfa:490498 Uniprot:J9PBI0
Length = 232
Score = 119 (46.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCP 59
A+ P R+L+R P P C +C E++ + TRCGH FC SCI+ ++ + CP
Sbjct: 15 ASGAP-RALERSGDPELPVTSFDCSVCLEVLHQPVRTRCGHVFCRSCIATSLKNNRWTCP 73
Query: 60 KCSASLP 66
C A LP
Sbjct: 74 YCRAYLP 80
>TAIR|locus:505006682 [details] [associations]
symbol:AT5G48655 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG327779
EMBL:AY150482 EMBL:AK118224 IPI:IPI00544715 RefSeq:NP_568701.1
RefSeq:NP_851156.1 RefSeq:NP_974908.1 UniGene:At.22299
ProteinModelPortal:Q8GS41 SMR:Q8GS41 PaxDb:Q8GS41 PRIDE:Q8GS41
EnsemblPlants:AT5G48655.1 EnsemblPlants:AT5G48655.2
EnsemblPlants:AT5G48655.3 GeneID:834923 KEGG:ath:AT5G48655
TAIR:At5g48655 HOGENOM:HOG000070995 InParanoid:Q8GS41 OMA:PANISNK
PhylomeDB:Q8GS41 ProtClustDB:CLSN2689957 ArrayExpress:Q8GS41
Genevestigator:Q8GS41 Uniprot:Q8GS41
Length = 203
Score = 117 (46.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 25/62 (40%), Positives = 31/62 (50%)
Query: 1 MSATSTPSRSLKRQHSPPDND-LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
++ +S SRS K PP+ CPIC E T+CGH FC CI + Q KCP
Sbjct: 125 VNMSSRVSRS-KAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCP 183
Query: 60 KC 61
C
Sbjct: 184 TC 185
>UNIPROTKB|Q1L5Z9 [details] [associations]
symbol:LONRF2 "LON peptidase N-terminal domain and RING
finger protein 2" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 EMBL:AC012493 GO:GO:0004176 eggNOG:COG2802
HOGENOM:HOG000060199 HOVERGEN:HBG081924 EMBL:DQ020495 EMBL:AK127206
EMBL:AC104782 EMBL:BC101664 EMBL:BC101662 IPI:IPI00394812
IPI:IPI00827614 RefSeq:NP_940863.3 UniGene:Hs.21380
ProteinModelPortal:Q1L5Z9 SMR:Q1L5Z9 IntAct:Q1L5Z9 STRING:Q1L5Z9
PhosphoSite:Q1L5Z9 DMDM:126215737 PaxDb:Q1L5Z9 PRIDE:Q1L5Z9
Ensembl:ENST00000393437 Ensembl:ENST00000409647 GeneID:164832
KEGG:hsa:164832 UCSC:uc002tal.4 CTD:164832 GeneCards:GC02M100889
H-InvDB:HIX0024130 HGNC:HGNC:24788 neXtProt:NX_Q1L5Z9
PharmGKB:PA142671540 InParanoid:Q1L5Z9 OMA:KVMCEVL
OrthoDB:EOG4BK538 ChiTaRS:LONRF2 GenomeRNAi:164832 NextBio:88502
Bgee:Q1L5Z9 CleanEx:HS_LONRF2 Genevestigator:Q1L5Z9 Uniprot:Q1L5Z9
Length = 754
Score = 127 (49.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 29/91 (31%), Positives = 43/91 (47%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNF----L 76
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF L
Sbjct: 446 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLAS-RNFNITVL 504
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
EL+ ++ D + D SE NL+
Sbjct: 505 AEELIFRYLPDELSDRKRIYDEEMSELSNLT 535
>ZFIN|ZDB-GENE-090312-35 [details] [associations]
symbol:ftr57 "finTRIM family, member 57"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-090312-35 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:CT025929 IPI:IPI00897481 Ensembl:ENSDART00000112220
Uniprot:F1QFD3
Length = 541
Score = 125 (49.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNF 75
+ +CP+C +L+++ CGH++C +CI+ C + + CP+C + ++ N
Sbjct: 10 EFMCPVCLDLLKDPVTIPCGHSYCKTCITGCWDQEDDKRVYSCPQCREAFNPRPALAKNT 69
Query: 76 LLNELVQKHKIKSAQD 91
+L E+V+K K K D
Sbjct: 70 ILAEMVEKLKTKPPAD 85
>WB|WBGene00003597 [details] [associations]
symbol:nhl-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0006915 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 EMBL:Z22177 EMBL:Z19155
PIR:E88549 PIR:S28275 RefSeq:NP_499028.1 ProteinModelPortal:Q03601
SMR:Q03601 DIP:DIP-26359N IntAct:Q03601 MINT:MINT-1095034
STRING:Q03601 PaxDb:Q03601 EnsemblMetazoa:F54G8.4 GeneID:176295
KEGG:cel:CELE_F54G8.4 UCSC:F54G8.4 CTD:176295 WormBase:F54G8.4
HOGENOM:HOG000018096 InParanoid:Q03601 OMA:GQIMERC NextBio:891968
Uniprot:Q03601
Length = 974
Score = 128 (50.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSA--SLP-DMNSVF-PN 74
L CPIC + ++ + C HTFC+ C+ C + +KCP+C A ++P D F PN
Sbjct: 41 LTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYDGVKAFQPN 100
Query: 75 FLLNELVQKHKIKSAQDSDGLRDFV 99
+ L ++ H + + + + +++
Sbjct: 101 YTLTGFLEIHLQATPESAAEIEEYI 125
>UNIPROTKB|Q03601 [details] [associations]
symbol:nhl-1 "RING finger protein nhl-1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001258 Pfam:PF01436 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0006915 GO:GO:0046872
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG3391
InterPro:IPR013017 PROSITE:PS51125 InterPro:IPR017907
GeneTree:ENSGT00550000074377 KO:K11997 EMBL:Z22177 EMBL:Z19155
PIR:E88549 PIR:S28275 RefSeq:NP_499028.1 ProteinModelPortal:Q03601
SMR:Q03601 DIP:DIP-26359N IntAct:Q03601 MINT:MINT-1095034
STRING:Q03601 PaxDb:Q03601 EnsemblMetazoa:F54G8.4 GeneID:176295
KEGG:cel:CELE_F54G8.4 UCSC:F54G8.4 CTD:176295 WormBase:F54G8.4
HOGENOM:HOG000018096 InParanoid:Q03601 OMA:GQIMERC NextBio:891968
Uniprot:Q03601
Length = 974
Score = 128 (50.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVEL---QIKCPKCSA--SLP-DMNSVF-PN 74
L CPIC + ++ + C HTFC+ C+ C + +KCP+C A ++P D F PN
Sbjct: 41 LTCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYDGVKAFQPN 100
Query: 75 FLLNELVQKHKIKSAQDSDGLRDFV 99
+ L ++ H + + + + +++
Sbjct: 101 YTLTGFLEIHLQATPESAAEIEEYI 125
>UNIPROTKB|F1PPT8 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:AAEX03007441 OMA:ELANTRW Ensembl:ENSCAFT00000003510
Uniprot:F1PPT8
Length = 820
Score = 127 (49.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 34/113 (30%), Positives = 52/113 (46%)
Query: 5 STPSRSLKRQ--HSPP---D-NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKC 58
S+P R++ SP D D C +C L+ E T CGHTFC C+ +C++ C
Sbjct: 434 SSPQRNMTSNTGESPELSIDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHC 493
Query: 59 PKCSASLPDMNSVFPNF----LLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
P C L ++ + NF L EL+ ++ D + D +E NL+
Sbjct: 494 PLCKEKLSELLAS-RNFNITILAEELIFRYLSDELSDRKRIYDEEMTELSNLT 545
>UNIPROTKB|F1NWA3 [details] [associations]
symbol:F1NWA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
EMBL:AADN02028660 IPI:IPI00587294 Ensembl:ENSGALT00000006484
OMA:ILEAEGM Uniprot:F1NWA3
Length = 579
Score = 125 (49.1 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+DL C +C + E T CGHTFC C+ +C++ + CP C SL + S P L
Sbjct: 284 SDLECSLCIRMFFEPVTTPCGHTFCKECLERCLDHRPNCPLCKQSLREYLKAGSYSPTVL 343
Query: 77 LNELV 81
L +++
Sbjct: 344 LQDIM 348
>ZFIN|ZDB-GENE-081031-50 [details] [associations]
symbol:btr19 "bloodthirsty-related gene family,
member 19" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081031-50
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00670000097622
EMBL:CT030005 Ensembl:ENSDART00000146448 Uniprot:I3IRW2
Length = 192
Score = 115 (45.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 24/71 (33%), Positives = 34/71 (47%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQI-KCPKCSASLPDMNSVFPN 74
P DL C IC E+ + T CGH FC SC++ C + Q CP C + + N
Sbjct: 9 PLSEDLQCSICLEVFTDPVSTPCGHNFCKSCLNTCWNKTQTCSCPNCKETFTQRPDLKIN 68
Query: 75 FLLNELVQKHK 85
L E+ + +K
Sbjct: 69 TTLREISEHYK 79
>TAIR|locus:2064392 [details] [associations]
symbol:DRIP2 "DREB2A-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009414 "response to water
deprivation" evidence=IGI] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0009414
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 eggNOG:NOG277991
HOGENOM:HOG000240404 KO:K16277 ProtClustDB:CLSN2688579 EMBL:U93215
EMBL:AY045618 EMBL:BT000505 IPI:IPI00544240 PIR:B84710
RefSeq:NP_565702.1 UniGene:At.14726 ProteinModelPortal:Q94AY3
SMR:Q94AY3 IntAct:Q94AY3 EnsemblPlants:AT2G30580.1 GeneID:817608
KEGG:ath:AT2G30580 TAIR:At2g30580 InParanoid:Q94AY3 OMA:NASHNDV
PhylomeDB:Q94AY3 Genevestigator:Q94AY3 Uniprot:Q94AY3
Length = 420
Score = 107 (42.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 22 LLCPICFELIREAH-ITRCGHTFCFSCI-SKCVELQIK-CPKCSASL--PDMNSVFPNFL 76
+ CP+C +L+R+A I+ C HTFC CI K E +I+ CP C L + + P+ +
Sbjct: 18 MTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLGGTPLEKLRPDHI 77
Query: 77 LNELVQK 83
L +L K
Sbjct: 78 LQDLRAK 84
Score = 36 (17.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 79 ELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVN 112
E KH+ +A ++FV + LP+ N
Sbjct: 386 ETTSKHQRVAASIGSSAKEFVMVLVYSRKLPECN 419
>UNIPROTKB|F1RVW9 [details] [associations]
symbol:LOC100514979 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 GeneTree:ENSGT00700000104280 EMBL:CU640421
Ensembl:ENSSSCT00000018741 Uniprot:F1RVW9
Length = 620
Score = 125 (49.1 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCPIC E+ R T CGH FC +C+ + Q + CP+C S+P +
Sbjct: 60 EDQVLCPICLEVFRHPVTTACGHNFCMTCLQGFWDHQATLGEALYCPQCRESIPSRPRLC 119
Query: 73 PNFLLNELV 81
N L E+V
Sbjct: 120 KNVTLEEMV 128
>UNIPROTKB|I3LAM0 [details] [associations]
symbol:LOC100514979 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
PRINTS:PR01407 GeneTree:ENSGT00700000104280 EMBL:CU640421
Ensembl:ENSSSCT00000030867 OMA:RLCKNVI Uniprot:I3LAM0
Length = 621
Score = 125 (49.1 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVF 72
++ +LCPIC E+ R T CGH FC +C+ + Q + CP+C S+P +
Sbjct: 61 EDQVLCPICLEVFRHPVTTACGHNFCMTCLQGFWDHQATLGEALYCPQCRESIPSRPRLC 120
Query: 73 PNFLLNELV 81
N L E+V
Sbjct: 121 KNVTLEEMV 129
>TAIR|locus:2099212 [details] [associations]
symbol:AT3G62970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
InterPro:IPR001841 InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51266 SMART:SM00184 InterPro:IPR004039
EMBL:CP002686 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:2.20.28.10 InterPro:IPR017921
PROSITE:PS51270 KO:K10144 IPI:IPI00526827 RefSeq:NP_191856.4
UniGene:At.34017 ProteinModelPortal:F4IZL5 SMR:F4IZL5
EnsemblPlants:AT3G62970.1 GeneID:825472 KEGG:ath:AT3G62970
OMA:QYRCPIC Uniprot:F4IZL5
Length = 287
Score = 119 (46.9 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 23/66 (34%), Positives = 38/66 (57%)
Query: 11 LKRQHSPPDNDLL--CPICFEL----IREAHITRCGHTFCFSCISKCV-ELQIKCPKCSA 63
L+ +HS +N CP+C+E ++ AH+ +CGHT C + + E Q +CP C+
Sbjct: 155 LRDKHSCIENSTKNSCPVCYEYLFDSVKAAHVMKCGHTMHMDCFEQMINENQYRCPICAK 214
Query: 64 SLPDMN 69
S+ DM+
Sbjct: 215 SMVDMS 220
>UNIPROTKB|F1LUK5 [details] [associations]
symbol:Ftsjd2 "Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR000467 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF01585 PROSITE:PS50006
PROSITE:PS50089 PROSITE:PS50174 SMART:SM00184 SMART:SM00240
SMART:SM00443 RGD:1307801 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
PANTHER:PTHR15067:SF3 IPI:IPI00777795 PRIDE:F1LUK5
Ensembl:ENSRNOT00000000641 ArrayExpress:F1LUK5 Uniprot:F1LUK5
Length = 748
Score = 110 (43.8 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 20/66 (30%), Positives = 39/66 (59%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM-NSVFPNFLL 77
+N+L C IC E +A C H+FC CIS+ ++ +++CP C + NS+ + +
Sbjct: 430 ENELQCIICSEYFIDAVTLNCAHSFCSFCISEWMKRKVECPICRKDIESRTNSLVLDNCI 489
Query: 78 NELVQK 83
+++V++
Sbjct: 490 SKMVER 495
Score = 38 (18.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 108 LPDVNLMLE--VLNQRKHLLEAESSVAQYKLLYEL 140
+PD M + V+ +RK ++E E+ +LL+ +
Sbjct: 633 IPDSREMSDWMVVGKRKMVIEDETEFCGEELLHSM 667
>TAIR|locus:2098505 [details] [associations]
symbol:AT3G07200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
EMBL:AC012395 ProtClustDB:CLSN2689957 IPI:IPI00548065
RefSeq:NP_001078119.1 RefSeq:NP_187376.1 UniGene:At.40383
ProteinModelPortal:Q9SFV0 SMR:Q9SFV0 EnsemblPlants:AT3G07200.1
EnsemblPlants:AT3G07200.2 GeneID:819908 KEGG:ath:AT3G07200
TAIR:At3g07200 InParanoid:Q9SFV0 OMA:NRRTRRE PhylomeDB:Q9SFV0
Genevestigator:Q9SFV0 Uniprot:Q9SFV0
Length = 182
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 16 SPPDND--LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC--SASLPDMNSV 71
+PP + CPIC + T+CGH FC CI + LQ KCP C ++ D+ V
Sbjct: 117 APPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDLIRV 176
Query: 72 F 72
F
Sbjct: 177 F 177
>TAIR|locus:2035025 [details] [associations]
symbol:AT1G18660 species:3702 "Arabidopsis thaliana"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 IPI:IPI00522616 RefSeq:NP_973859.1
UniGene:At.20365 UniGene:At.67116 ProteinModelPortal:F4ICB5
SMR:F4ICB5 PRIDE:F4ICB5 EnsemblPlants:AT1G18660.4 GeneID:838447
KEGG:ath:AT1G18660 OMA:EVEITEC Uniprot:F4ICB5
Length = 491
Score = 122 (48.0 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 32/123 (26%), Positives = 61/123 (49%)
Query: 10 SLKRQHSPPD--NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASL-P 66
S+++ H + +D C +C +L+ E T CGHTFC SC+ + ++ KCP C +
Sbjct: 180 SMRKTHGMAERSDDFDCTVCLKLLYEPATTPCGHTFCRSCLFQSMDRGNKCPLCRTVIFM 239
Query: 67 DMNSVFPNFLLNELVQKHKIKSAQDSDGLRD---FVASESQNLSLPDVNLMLEVLNQRKH 123
+ + LN +++K+ + + +D + +ES L + DV + + L+ H
Sbjct: 240 TPRTCAVSVTLNNIIEKNFPEEYAERKSEQDTLVHLGNESMPLFVMDVIIPCQKLSL--H 297
Query: 124 LLE 126
+ E
Sbjct: 298 IFE 300
>TAIR|locus:2024244 [details] [associations]
symbol:BARD1 "AT1G04020" species:3702 "Arabidopsis
thaliana" [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0009934 "regulation of meristem
structural organization" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006260 "DNA
replication" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0009555 "pollen development" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016568 "chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518
EMBL:CP002684 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0048366 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 GO:GO:0009934 KO:K10683 PANTHER:PTHR13763
IPI:IPI00538630 RefSeq:NP_171898.2 UniGene:At.49850
ProteinModelPortal:F4I443 SMR:F4I443 EnsemblPlants:AT1G04020.1
GeneID:839329 KEGG:ath:AT1G04020 OMA:IEWAPQV Uniprot:F4I443
Length = 714
Score = 107 (42.7 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLP 66
+L CP+C +L+ + C H FC SC+ K +++ CP C + P
Sbjct: 22 ELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESGCPVCKSKHP 67
Score = 40 (19.1 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 82 QKHKIKSAQDSDGLRDFVASESQ--NLSLP--DVNLM 114
Q K + QDS RD AS++ +L +P + NLM
Sbjct: 260 QLPKSHTEQDSKRKRDITASDAMENHLKVPKRENNLM 296
>UNIPROTKB|F1P3J6 [details] [associations]
symbol:Gga.40071 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:GHSYCRR GeneTree:ENSGT00440000033329 EMBL:AADN02031324
IPI:IPI00597781 Ensembl:ENSGALT00000022307 Uniprot:F1P3J6
Length = 597
Score = 123 (48.4 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+D C +C L E T CGHTFC C+ +C++ +CP C SL + L
Sbjct: 299 SDFECSLCMRLFFEPVTTPCGHTFCKGCLERCLDHAPQCPLCKESLKEYLASRKYSITEL 358
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ K+ + + +E NL+
Sbjct: 359 LEELIMKYLSDELYERKRIHAEETAEHSNLT 389
>UNIPROTKB|H9KYY7 [details] [associations]
symbol:H9KYY7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02066798
Ensembl:ENSGALT00000001598 OMA:CLEKPQP Uniprot:H9KYY7
Length = 205
Score = 114 (45.2 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 25/94 (26%), Positives = 43/94 (45%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCIS------KCVELQIKCPKCSASLPDMNSVF 72
+ +L C +C ++ R CGH+FC CI C + CP CSA +
Sbjct: 11 EEELTCSVCLDIYRNPVSLGCGHSFCEECIQGVLRSQHCPQGLFSCPLCSALEAPPTKLQ 70
Query: 73 PNFLLNELVQKHKIKSAQDSDGLRDFVASESQNL 106
PN L +VQK + +++ S L + + + + +
Sbjct: 71 PNIQLRSIVQKF-LDTSEQSAALEEELRRDDEEI 103
>RGD|1306853 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005811
"lipid particle" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IMP] [GO:0006955 "immune response"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA;ISO] [GO:0007254 "JNK cascade" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009898 "internal side of plasma
membrane" evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=IMP] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=IEA;ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030316
"osteoclast differentiation" evidence=IEA;ISO] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0031996
"thioesterase binding" evidence=IEA;ISO] [GO:0032147 "activation of
protein kinase activity" evidence=ISO] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0035631 "CD40 receptor complex" evidence=IEA;ISO] [GO:0042088
"T-helper 1 type immune response" evidence=IEA;ISO] [GO:0042102
"positive regulation of T cell proliferation" evidence=IEA;ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043234 "protein
complex" evidence=IMP] [GO:0043422 "protein kinase B binding"
evidence=IEA;ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA;ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA;ISO] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA;ISO] [GO:0045453 "bone resorption" evidence=IEA;ISO]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0046849 "bone remodeling" evidence=ISO]
[GO:0047485 "protein N-terminus binding" evidence=IEA;ISO]
[GO:0048468 "cell development" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IMP] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA;ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA;ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
RGD:1306853 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0043234 GO:GO:0006461 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 EMBL:CH473949 GO:GO:0045672
GO:GO:0030316 GO:GO:0032743 GO:GO:0051023 GO:GO:0043507
GO:GO:0070498 GO:GO:0045410 GO:GO:2000679 GO:GO:0045084
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:BC168921
IPI:IPI00363697 RefSeq:NP_001101224.1 UniGene:Rn.220435
ProteinModelPortal:B5DF45 STRING:B5DF45 PhosphoSite:B5DF45
Ensembl:ENSRNOT00000006148 GeneID:311245 KEGG:rno:311245
UCSC:RGD:1306853 NextBio:663249 Genevestigator:B5DF45
Uniprot:B5DF45
Length = 530
Score = 122 (48.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSV 71
+ PP ++ CPIC +REA T CGH FC +CI+K + + KCP + L + N +
Sbjct: 59 EFDPPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLE-NQL 117
Query: 72 FP-NFLLNELV 81
FP NF E++
Sbjct: 118 FPDNFAKREIL 128
>RGD|1561074 [details] [associations]
symbol:Trim43a "tripartite motif-containing 43A" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 RGD:1561074 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 KO:K12019 CTD:547109
GeneTree:ENSGT00670000097491 OrthoDB:EOG4ZPDV5 IPI:IPI00370516
RefSeq:NP_001136416.1 UniGene:Rn.198201 ProteinModelPortal:D3ZLN6
Ensembl:ENSRNOT00000044521 GeneID:300884 KEGG:rno:300884
UCSC:RGD:1561074 NextBio:647692 Uniprot:D3ZLN6
Length = 451
Score = 121 (47.7 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCS-ASLPDMNSVFPNFLL 77
L C IC + + +TRCGH FC +C+ S ++ I CP C S P+ + P L
Sbjct: 13 LTCFICLGIFTDLVLTRCGHPFCRACLLLFSADTQIPIHCPLCRHPSKPNFRTAIPGKKL 72
Query: 78 NELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLML 115
+V+K +IK S+ + E + + + ++L
Sbjct: 73 ISIVRKERIKKYLSSEEHKCMTHKERKTIFCDENRVLL 110
>UNIPROTKB|C9J0Q4 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0001741 "XY
body" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005634 GO:GO:0009411
GO:GO:0046872 GO:GO:0008270 GO:GO:0000785 GO:GO:0007283
GO:GO:0006974 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0045910 EMBL:AC068312
EMBL:AC008151 EMBL:AC034186 HGNC:HGNC:18278 HOGENOM:HOG000234845
IPI:IPI00879143 ProteinModelPortal:C9J0Q4 SMR:C9J0Q4 STRING:C9J0Q4
Ensembl:ENST00000413832 ArrayExpress:C9J0Q4 Bgee:C9J0Q4
Uniprot:C9J0Q4
Length = 92
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 20 NDLL-CPICFELIREAHIT-RCGHTFCFSCISKCVELQIKCPKCSASL--PDMNSVFPNF 75
+DLL C ICFE A I +C H +C CI K + + +CP C ++ PD+ + N
Sbjct: 20 DDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKN---NR 76
Query: 76 LLNELVQ 82
+L+ELV+
Sbjct: 77 ILDELVK 83
>ZFIN|ZDB-GENE-080212-7 [details] [associations]
symbol:zgc:173581 "zgc:173581" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-080212-7 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 KO:K12015
HOVERGEN:HBG106862 EMBL:BC154144 IPI:IPI00877475
RefSeq:NP_001108173.1 UniGene:Dr.146601 ProteinModelPortal:A8KBK1
GeneID:100137104 KEGG:dre:100137104 NextBio:20789398 Uniprot:A8KBK1
Length = 554
Score = 122 (48.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFP 73
+P +L C IC E+ + T CGH FC SC++KC CP C + +
Sbjct: 30 NPLSEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCSCPYCKETFTQRPDLKI 89
Query: 74 NFLLNELVQKHKIKSAQD 91
N L E+ Q +K K ++
Sbjct: 90 NTTLREISQHYKEKRPEE 107
>UNIPROTKB|F8WE49 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 Prosite:PS00518
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006281
Gene3D:1.10.720.30 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC068312 EMBL:AC008151 EMBL:AC034186
HGNC:HGNC:18278 IPI:IPI00878498 ProteinModelPortal:F8WE49
SMR:F8WE49 Ensembl:ENST00000415439 ArrayExpress:F8WE49 Bgee:F8WE49
Uniprot:F8WE49
Length = 310
Score = 118 (46.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 20 NDLL-CPICFELIREAHIT-RCGHTFCFSCISKCVELQIKCPKCSASL--PDMNSVFPNF 75
+DLL C ICFE A I +C H +C CI K + + +CP C ++ PD+ + N
Sbjct: 20 DDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKN---NR 76
Query: 76 LLNELVQK------HKIKSAQDSDGLRDFVASESQNLSL 108
+L+ELV+ H ++ A +S + +S S+NL++
Sbjct: 77 ILDELVKSLNFARNHLLQFALESPA-KSPASSSSKNLAV 114
>RGD|1305074 [details] [associations]
symbol:Trim69 "tripartite motif-containing 69" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO;ISS] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097 RGD:1305074
Prosite:PS00518 GO:GO:0005737 GO:GO:0006915 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:COG5432 HOGENOM:HOG000234133
HOVERGEN:HBG001357 HSSP:Q92021 GeneTree:ENSGT00700000104222
CTD:140691 KO:K12034 OrthoDB:EOG4KSPJQ EMBL:BC091171
IPI:IPI00555318 RefSeq:NP_001013178.1 UniGene:Rn.95375
ProteinModelPortal:Q5BK82 PRIDE:Q5BK82 Ensembl:ENSRNOT00000023209
GeneID:311373 KEGG:rno:311373 UCSC:RGD:1305074 InParanoid:Q5BK82
NextBio:663486 Genevestigator:Q5BK82 Uniprot:Q5BK82
Length = 499
Score = 121 (47.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 5 STPSRSLKRQHSPPD--NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CP 59
S PS L + D +L CP+C + R+ + CGH FC +CI ++Q K CP
Sbjct: 20 SDPSTHLPSKVVIQDITTELHCPLCNDWFRDPLMLTCGHNFCQACIQNYWKMQAKETFCP 79
Query: 60 KCSASLPDMNSVFPNFLLNELVQKHK 85
+C N F N +L +LV+K K
Sbjct: 80 ECKMLCQYSNCTF-NLVLEKLVEKIK 104
>UNIPROTKB|Q8IYM9 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0009615 "response to virus"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0005794 GO:GO:0003714 GO:GO:0019048
GO:GO:0006955 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0016567
GO:GO:0051607 GO:GO:0009615 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0015030 GO:GO:0070206
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 HOVERGEN:HBG001357
HOGENOM:HOG000234134 OrthoDB:EOG4229JJ KO:K11999 EMBL:X82200
EMBL:BC022281 EMBL:BC035582 IPI:IPI00477398 IPI:IPI00477812
PIR:A57041 RefSeq:NP_001186502.1 RefSeq:NP_006065.2
UniGene:Hs.501778 UniGene:Hs.684559 UniGene:Hs.733231
ProteinModelPortal:Q8IYM9 SMR:Q8IYM9 IntAct:Q8IYM9
MINT:MINT-2868217 STRING:Q8IYM9 PhosphoSite:Q8IYM9 DMDM:47606181
PaxDb:Q8IYM9 PRIDE:Q8IYM9 DNASU:10346 Ensembl:ENST00000379965
GeneID:10346 KEGG:hsa:10346 UCSC:uc001mbr.3 UCSC:uc009yes.3
CTD:10346 GeneCards:GC11P005667 HGNC:HGNC:16379 HPA:HPA003307
HPA:HPA003575 MIM:606559 neXtProt:NX_Q8IYM9 PharmGKB:PA38129
eggNOG:NOG258942 InParanoid:Q8IYM9 OMA:HQTFRIN ChiTaRS:TRIM22
GenomeRNAi:10346 NextBio:39235 ArrayExpress:Q8IYM9 Bgee:Q8IYM9
CleanEx:HS_TRIM22 Genevestigator:Q8IYM9 GermOnline:ENSG00000132274
Uniprot:Q8IYM9
Length = 498
Score = 109 (43.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-------KCPKCSASLPDMNSV 71
+ ++ CPIC EL+ E CGH+FC +CI+ ++ + CP C N +
Sbjct: 10 EKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN-L 68
Query: 72 FPNFLLNELVQKHK-IKSAQDSDGLRDFVASESQNLSL 108
PN L +V++ K +K + RD + L +
Sbjct: 69 RPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQI 106
Score = 33 (16.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 108 LPDVNLMLEVLNQ 120
+PD++ ML+VL +
Sbjct: 280 VPDLSGMLQVLKE 292
>UNIPROTKB|E1BSU9 [details] [associations]
symbol:LOC416147 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00590049 Ensembl:ENSGALT00000001837 OMA:PIEERRC
Uniprot:E1BSU9
Length = 274
Score = 101 (40.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/88 (28%), Positives = 39/88 (44%)
Query: 13 RQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCV--ELQIK----CPKCSASLP 66
R S +++L C IC L + CGH+FC C+ K + + Q K CP C L
Sbjct: 9 RASSSLEDELTCSICLSLYKNPVSLCCGHSFCKQCVQKVLSNQQQAKASYSCPLCRVDLG 68
Query: 67 DMNSVFPNFLLNELVQKHKIKSAQDSDG 94
+ + NF L +V+ + + G
Sbjct: 69 PILELQNNFHLCSIVETYLANKGKKDKG 96
Score = 42 (19.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 84 HKIKSAQDSDGLR-DFVASESQNLSL--PDVNLMLEVLNQRKHLLEAES 129
HKI + +++ ++ D ++ L DV++ LE L Q K+ +E +
Sbjct: 192 HKILTLREAHSMKLDDLSHTVDRLLRYRSDVSIALEELQQNKNQIETNT 240
>UNIPROTKB|Q58DB5 [details] [associations]
symbol:RAD18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006281 Gene3D:1.10.720.30 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HOVERGEN:HBG054721
GeneTree:ENSGT00390000011230 EMBL:DAAA02053765 EMBL:DAAA02053766
EMBL:DAAA02053767 EMBL:DAAA02053768 EMBL:DAAA02053769
EMBL:DAAA02053770 IPI:IPI00702052 UniGene:Bt.26308 EMBL:BT021682
STRING:Q58DB5 Ensembl:ENSBTAT00000066111 InParanoid:Q58DB5
Uniprot:Q58DB5
Length = 336
Score = 118 (46.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 20 NDLL-CPICFELIREAH-ITRCGHTFCFSCISKCVELQIKCPKCSASL--PDM--NSVFP 73
+DLL C ICFE A I +C H +C CI K + + +CP C ++ PD+ N V
Sbjct: 20 DDLLRCGICFEYFNIAMMIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRVLD 79
Query: 74 NFLLN-ELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+ N + H ++ A +S + +S S+NL+
Sbjct: 80 ELVKNLNFARNHLLQFALESPPI-SAASSSSKNLA 113
>POMBASE|SPBC1734.06 [details] [associations]
symbol:rhp18 "Rad18 homolog Rhp18" species:4896
"Schizosaccharomyces pombe" [GO:0000077 "DNA damage checkpoint"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IMP] [GO:0006301
"postreplication repair" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IMP] [GO:0031144 "proteasome localization" evidence=IMP]
[GO:0065007 "biological regulation" evidence=NAS]
InterPro:IPR001841 InterPro:IPR003034 InterPro:IPR004580
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 UniPathway:UPA00143
PomBase:SPBC1734.06 Prosite:PS00518 GO:GO:0000077 GO:GO:0046872
GO:GO:0003684 EMBL:CU329671 GO:GO:0008270 GenomeReviews:CU329671_GR
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0006301 GO:GO:0031144 eggNOG:COG5432
KO:K10627 TIGRFAMs:TIGR00599 OMA:YICKEFF OrthoDB:EOG4F4WMB
EMBL:AB079544 PIR:T39653 RefSeq:NP_595423.1
ProteinModelPortal:O74747 MINT:MINT-4782997 STRING:O74747
PRIDE:O74747 EnsemblFungi:SPBC1734.06.1 GeneID:2539686
KEGG:spo:SPBC1734.06 NextBio:20800840 Uniprot:O74747
Length = 387
Score = 119 (46.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS-VFPNFLL 77
D+ L C IC E R IT C HTFC CI + CP C A P+ S + N +L
Sbjct: 24 DSSLRCLICHEYFRAPLITSCSHTFCSFCIRDYLREHPMCPACRA--PEQESRLRKNTIL 81
Query: 78 NELVQKHKI 86
E+++ K+
Sbjct: 82 EEILESFKV 90
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 21/57 (36%), Positives = 29/57 (50%)
Query: 10 SLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPKCSA 63
++ + N+ C IC EL RE +T CGH FC+ C+ K + K CP C A
Sbjct: 5 TITNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKA 61
>ZFIN|ZDB-GENE-070912-318 [details] [associations]
symbol:ftr27 "finTRIM family, member 27"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-070912-318 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG2177 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 EMBL:BX548047
IPI:IPI00862890 UniGene:Dr.88749 Ensembl:ENSDART00000135584
OMA:YESHEES Uniprot:B0S6S1
Length = 171
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCV---ELQIK-CPKCSASLPDMNSVFPNFLLNE 79
C IC +L+++ CGH++C +CI++ +L I CP+C + ++ N +L E
Sbjct: 15 CSICLDLLKDPVTIPCGHSYCMNCITEYWNRRDLSINSCPQCRQTFTPKPALNKNVMLAE 74
Query: 80 LVQKHKIKSAQDSD 93
+V+K K Q D
Sbjct: 75 MVEKVKAIKVQTVD 88
>ZFIN|ZDB-GENE-080402-4 [details] [associations]
symbol:btr22 "bloodthirsty-related gene family,
member 22" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080402-4 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862
GeneTree:ENSGT00660000095328 EMBL:CT030005 IPI:IPI00632223
Ensembl:ENSDART00000135762 Bgee:F6NQA8 Uniprot:F6NQA8
Length = 551
Score = 121 (47.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/77 (31%), Positives = 36/77 (46%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPN 74
P +L C IC E+ + T CGH FC SC++KC CP C + + N
Sbjct: 27 PLSEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSKTCSCPNCKETFTQRPDLKIN 86
Query: 75 FLLNELVQKHKIKSAQD 91
L E+ + +K K ++
Sbjct: 87 TTLREISEHYKEKKPEE 103
>RGD|1310105 [details] [associations]
symbol:Trim27 "tripartite motif-containing 27" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0002820 "negative regulation of adaptive immune response"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA;ISO] [GO:0045814 "negative regulation of gene
expression, epigenetic" evidence=IEA;ISO] [GO:0070206 "protein
trimerization" evidence=IEA;ISO] [GO:0072643 "interferon-gamma
secretion" evidence=IEA;ISO] [GO:0090281 "negative regulation of
calcium ion import" evidence=IEA;ISO] [GO:1900041 "negative
regulation of interleukin-2 secretion" evidence=IEA;ISO]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
RGD:1310105 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CH474072 GeneTree:ENSGT00700000104307
IPI:IPI00562695 UniGene:Rn.8393 Ensembl:ENSRNOT00000041671
UCSC:RGD:1310105 NextBio:632221 Uniprot:D4AAJ8
Length = 246
Score = 115 (45.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPN-FLLN- 78
CP+C + E + CGH C +C+++C E + CP+C + P + + PN L N
Sbjct: 16 CPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETFPQRH-MRPNRHLANV 74
Query: 79 -ELVQKHKIKSAQDSDG 94
+LV++ + + DG
Sbjct: 75 TQLVKQLRTERPSGPDG 91
>ZFIN|ZDB-GENE-081031-80 [details] [associations]
symbol:btr21 "bloodthirsty-related gene family,
member 21" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081031-80 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 GeneTree:ENSGT00660000095328 EMBL:CT030005
IPI:IPI00608496 Ensembl:ENSDART00000131989 Uniprot:F6P534
Length = 563
Score = 121 (47.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/100 (26%), Positives = 42/100 (42%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKC--VELQIKCPKCSASLPDM 68
L P DL C +C ++ + T CGH FC SC++KC CP C +
Sbjct: 23 LSMAKGPLSEDLQCSVCLDVFTDPVSTPCGHNFCRSCLNKCWNKSWNYSCPNCKETFTQR 82
Query: 69 NSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSL 108
+ N L E+ + +K K + + + V ++ L
Sbjct: 83 PDLKINTSLREISEHYKEKRPERKAEVAEVVCDVCEDRKL 122
>RGD|631346 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016235 "aggresome" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0070201 "regulation of establishment of protein localization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 120 (47.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 22/65 (33%), Positives = 41/65 (63%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNFL 76
+ L CPIC E+ +E + +CGH++C +C+ S+ ++ +++CP C S+ D +S PN
Sbjct: 12 DQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSV-DCSSSPPNVS 70
Query: 77 LNELV 81
L ++
Sbjct: 71 LARVI 75
>UNIPROTKB|Q810I1 [details] [associations]
symbol:Trim50 "E3 ubiquitin-protein ligase TRIM50"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 RGD:631346
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
CTD:135892 eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024
OrthoDB:EOG4RNB87 EMBL:AY081950 IPI:IPI00389366 RefSeq:NP_851594.1
UniGene:Rn.43040 ProteinModelPortal:Q810I1 PRIDE:Q810I1
GeneID:288596 KEGG:rno:288596 UCSC:RGD:631346 InParanoid:Q810I1
NextBio:628389 Genevestigator:Q810I1 Uniprot:Q810I1
Length = 483
Score = 120 (47.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 22/65 (33%), Positives = 41/65 (63%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNFL 76
+ L CPIC E+ +E + +CGH++C +C+ S+ ++ +++CP C S+ D +S PN
Sbjct: 12 DQLQCPICLEVFKEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSV-DCSSSPPNVS 70
Query: 77 LNELV 81
L ++
Sbjct: 71 LARVI 75
>UNIPROTKB|E2RFB0 [details] [associations]
symbol:TRIM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 CTD:135892 KO:K12024 OMA:TFFDADR
EMBL:AAEX03004245 RefSeq:XP_546929.2 ProteinModelPortal:E2RFB0
Ensembl:ENSCAFT00000020820 GeneID:489811 KEGG:cfa:489811
NextBio:20862932 Uniprot:E2RFB0
Length = 487
Score = 120 (47.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 21/67 (31%), Positives = 41/67 (61%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E + +CGH++C C+ S+ ++ +++CP C + D +S PN
Sbjct: 11 EDRLQCPICLEVFKEPMMLQCGHSYCKGCLVSLSRHLDSELRCPVCQQEV-DSSSSPPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLARVIE 76
>UNIPROTKB|E1BID7 [details] [associations]
symbol:TRIM69 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104222
OMA:IAAHKEN EMBL:DAAA02030051 IPI:IPI00717661
Ensembl:ENSBTAT00000009893 Uniprot:E1BID7
Length = 502
Score = 120 (47.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 29/79 (36%), Positives = 39/79 (49%)
Query: 10 SLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPKCSASLP 66
S K Q +L CP+C + R+A + CGH FC SCI + Q CP+C
Sbjct: 29 SSKVQIQDITTELHCPLCNDWFRDALMLSCGHNFCQSCIQNFWKQQANETFCPECKMLCQ 88
Query: 67 DMNSVFPNFLLNELVQKHK 85
N F N +L +LV+K K
Sbjct: 89 YSNCTF-NLVLEKLVEKIK 106
>ZFIN|ZDB-GENE-060825-109 [details] [associations]
symbol:btr04 "bloodthirsty-related gene family,
member 4" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-060825-109 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030144 IPI:IPI00486847
RefSeq:XP_003198956.1 UniGene:Dr.30113 Ensembl:ENSDART00000138523
GeneID:565512 KEGG:dre:565512 CTD:565512 NextBio:20885923
Bgee:F1Q9T2 Uniprot:F1Q9T2
Length = 440
Score = 119 (46.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 9 RSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLP 66
+SL P +L C +C ++ + T CGH FC SC+++C + CP CS +
Sbjct: 24 QSLSSSQGPLFEELQCSVCLDVFTDPVSTPCGHNFCKSCLNECWDKSQNCNCPICSETFS 83
Query: 67 DMNSVFPNFLLNELVQ--KHKIKSAQDSDGLRD 97
+ N L ++VQ K ++ ++ ++D
Sbjct: 84 KRPKLKINTTLRQVVQLFKERLSKSEVQQMIQD 116
>CGD|CAL0005238 [details] [associations]
symbol:orf19.5438 species:5476 "Candida albicans" [GO:0016925
"protein sumoylation" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 CGD:CAL0005238 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717716.1 RefSeq:XP_717810.1 ProteinModelPortal:Q5A7M8
GeneID:3640523 GeneID:3640681 KEGG:cal:CaO19.12893
KEGG:cal:CaO19.5438 eggNOG:NOG131815 Uniprot:Q5A7M8
Length = 129
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCV 52
P++ +R+ + +D+ CPICF+ +R A T CGH FC CI + +
Sbjct: 34 PTQPEERRITKKLSDVECPICFDEVRRAITTSCGHVFCLECIERSI 79
>ZFIN|ZDB-GENE-041114-86 [details] [associations]
symbol:ftr72 "finTRIM family, member 72"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-041114-86 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOGENOM:HOG000234136
HOVERGEN:HBG106862 EMBL:BC085564 IPI:IPI00866697 UniGene:Dr.118348
ProteinModelPortal:Q5U3F5 eggNOG:NOG326605 InParanoid:Q5U3F5
OrthoDB:EOG4K6G6B NextBio:20865075 Uniprot:Q5U3F5
Length = 550
Score = 120 (47.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
CP+C +L++E CGH++C SCI+ C L+ +CP+C S + N L+
Sbjct: 15 CPVCLDLLKEPVTIPCGHSYCMSCITDCWSLKEQGPPYRCPQCRESFSQRPLLKKNTLIA 74
Query: 79 ELVQ 82
E+++
Sbjct: 75 EMME 78
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 120 (47.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 30/77 (38%), Positives = 43/77 (55%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSV 71
+ PP ++ CPIC +REA T CGH FC +CI K + + KCP + L + N +
Sbjct: 61 EFDPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSLRDAGHKCPVDNEILME-NQL 119
Query: 72 FP-NFLLNELVQKHKIK 87
FP NF E++ K+K
Sbjct: 120 FPDNFAKREILSL-KVK 135
>ZFIN|ZDB-GENE-090508-13 [details] [associations]
symbol:ftr73 "finTRIM family, member 73"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-090508-13 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:CR853294 IPI:IPI00770279 Ensembl:ENSDART00000147469
Uniprot:E9QBF8
Length = 562
Score = 120 (47.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
CP+C +L++E CGH++C SCI+ C L+ +CP+C S + N L+
Sbjct: 15 CPVCLDLLKEPVTIPCGHSYCMSCITDCWSLKEQGPPYRCPQCRESFSQRPLLKKNTLIA 74
Query: 79 ELVQ 82
E+++
Sbjct: 75 EMME 78
>UNIPROTKB|I3LHE2 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000033329 OMA:ELANTRW
EMBL:CU856636 Ensembl:ENSSSCT00000023061 Uniprot:I3LHE2
Length = 563
Score = 120 (47.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNEL 80
D C +C L+ E T CGHTFC C+ +C++ CP C L ++ + NF + L
Sbjct: 471 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKEKLSELLAS-RNFNITTL 529
Query: 81 VQKHKIKSAQD 91
++ ++ D
Sbjct: 530 AEELILRYLSD 540
>UNIPROTKB|I3L0H3 [details] [associations]
symbol:TRIM73 "Tripartite motif-containing protein 73"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC006014 HGNC:HGNC:18162
ProteinModelPortal:I3L0H3 SMR:I3L0H3 PRIDE:I3L0H3
Ensembl:ENST00000447409 Bgee:I3L0H3 Uniprot:I3L0H3
Length = 249
Score = 114 (45.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 21/67 (31%), Positives = 41/67 (61%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E+ + +CGH++C C+ S ++ +++CP C + D +S PN
Sbjct: 11 EDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCW-QVVDGSSSLPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLAWVIE 76
>UNIPROTKB|Q86UV7 [details] [associations]
symbol:TRIM73 "Tripartite motif-containing protein 73"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC006014
eggNOG:NOG245385 KO:K12024 EMBL:AF498998 IPI:IPI00328817
RefSeq:NP_944606.2 UniGene:Hs.632307 UniGene:Hs.733046
ProteinModelPortal:Q86UV7 SMR:Q86UV7 IntAct:Q86UV7 STRING:Q86UV7
DMDM:56404880 PRIDE:Q86UV7 DNASU:375593 Ensembl:ENST00000323819
Ensembl:ENST00000437796 Ensembl:ENST00000572315
Ensembl:ENST00000577020 GeneID:375593 KEGG:hsa:375593
UCSC:uc003udc.1 CTD:375593 GeneCards:GC07P075024 HGNC:HGNC:18162
MIM:612549 neXtProt:NX_Q86UV7 PharmGKB:PA38510 HOGENOM:HOG000081784
HOVERGEN:HBG094091 InParanoid:Q86UV7 PhylomeDB:Q86UV7
GenomeRNAi:375593 NextBio:100533 ArrayExpress:Q86UV7 Bgee:Q86UV7
CleanEx:HS_TRIM73 Genevestigator:Q86UV7 GermOnline:ENSG00000178809
Uniprot:Q86UV7
Length = 250
Score = 114 (45.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 21/67 (31%), Positives = 41/67 (61%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E+ + +CGH++C C+ S ++ +++CP C + D +S PN
Sbjct: 11 EDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCW-QVVDGSSSLPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLAWVIE 76
>UNIPROTKB|E1BSV9 [details] [associations]
symbol:LOC416146 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00580824 Ensembl:ENSGALT00000001825 OMA:QINTEEL
Uniprot:E1BSV9
Length = 314
Score = 116 (45.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCIS------KCVELQIKCPKCSASLPDMNSVF 72
+ +L C +C ++ R CGH+FC CI C + CP CSA +
Sbjct: 11 EEELTCSVCLDIYRNPVSLGCGHSFCEECIQGVLRSQHCPQGLFSCPLCSALEAPPTKLQ 70
Query: 73 PNFLLNELVQKHKIKSAQDSDGLRD 97
PN L +VQK + +++ S L D
Sbjct: 71 PNIQLRSIVQKF-LDTSEQSAALED 94
>UNIPROTKB|Q9Y4K3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IEA] [GO:0030316 "osteoclast differentiation"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0042088 "T-helper 1 type immune response" evidence=IEA]
[GO:0042102 "positive regulation of T cell proliferation"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043011 "myeloid dendritic cell
differentiation" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0048661 "positive
regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0070498 "interleukin-1-mediated signaling pathway"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA;TAS] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=EXP;IDA;TAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IMP;TAS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0043422 "protein kinase B binding" evidence=IPI]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IGI;IDA]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=IDA;NAS] [GO:0070555 "response to interleukin-1"
evidence=IDA] [GO:0032147 "activation of protein kinase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IDA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA;TAS] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IPI] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0000187 "activation of MAPK activity" evidence=TAS] [GO:0002224
"toll-like receptor signaling pathway" evidence=TAS] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=TAS]
[GO:0007254 "JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling
pathway" evidence=TAS] [GO:0010008 "endosome membrane"
evidence=TAS] [GO:0031293 "membrane protein intracellular domain
proteolysis" evidence=TAS] [GO:0034130 "toll-like receptor 1
signaling pathway" evidence=TAS] [GO:0034134 "toll-like receptor 2
signaling pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3
signaling pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=TAS] [GO:0035666 "TRIF-dependent
toll-like receptor signaling pathway" evidence=TAS] [GO:0035872
"nucleotide-binding domain, leucine rich repeat containing receptor
signaling pathway" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0051403 "stress-activated MAPK
cascade" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;NAS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IDA]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] Reactome:REACT_6782 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005938 GO:GO:0048471 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway
Pathway_Interaction_DB:cd8tcrpathway EMBL:CH471064 GO:GO:0042981
Pathway_Interaction_DB:tcrpathway GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 Pathway_Interaction_DB:bcr_5pathway GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0045087
GO:GO:0000187 GO:GO:0010008 GO:GO:0000122 GO:GO:0031293
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0031398
GO:GO:0070555 GO:GO:0004842 GO:GO:0001503 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0048468
GO:GO:0051865 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway
Pathway_Interaction_DB:p38_mkk3_6pathway GO:GO:0007249
SUPFAM:SSF49599 GO:GO:0043011 GO:GO:0050870 GO:GO:0035631
Pathway_Interaction_DB:p38alphabetapathway GO:GO:0045672
GO:GO:0030316 GO:GO:0070423 Pathway_Interaction_DB:il1pathway
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AC009656 PDB:1LB6 PDBsum:1LB6 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:U78798
EMBL:AY228337 EMBL:AK292978 EMBL:AC061999 EMBL:BC031052
IPI:IPI00743663 PIR:S71821 RefSeq:NP_004611.1 RefSeq:NP_665802.1
UniGene:Hs.444172 UniGene:Hs.591983 PDB:1LB4 PDB:1LB5 PDB:2ECI
PDB:2JMD PDB:3HCS PDB:3HCT PDB:3HCU PDBsum:1LB4 PDBsum:1LB5
PDBsum:2ECI PDBsum:2JMD PDBsum:3HCS PDBsum:3HCT PDBsum:3HCU
ProteinModelPortal:Q9Y4K3 SMR:Q9Y4K3 DIP:DIP-27515N IntAct:Q9Y4K3
MINT:MINT-88585 STRING:Q9Y4K3 PhosphoSite:Q9Y4K3 DMDM:30580642
PaxDb:Q9Y4K3 PRIDE:Q9Y4K3 DNASU:7189 Ensembl:ENST00000348124
Ensembl:ENST00000526995 GeneID:7189 KEGG:hsa:7189 UCSC:uc001mwq.2
GeneCards:GC11M036467 HGNC:HGNC:12036 HPA:CAB004605 HPA:HPA019805
HPA:HPA020599 MIM:602355 neXtProt:NX_Q9Y4K3 PharmGKB:PA36713
InParanoid:Q9Y4K3 PhylomeDB:Q9Y4K3 ChiTaRS:Traf6
EvolutionaryTrace:Q9Y4K3 GenomeRNAi:7189 NextBio:28192 Bgee:Q9Y4K3
CleanEx:HS_TRAF6 Genevestigator:Q9Y4K3 GermOnline:ENSG00000175104
Uniprot:Q9Y4K3
Length = 522
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSV 71
+ PP ++ CPIC +REA T CGH FC +CI K + + KCP + L + N +
Sbjct: 59 EFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE-NQL 117
Query: 72 FP-NFLLNELV 81
FP NF E++
Sbjct: 118 FPDNFAKREIL 128
>UNIPROTKB|B6CJY4 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9531 "Cercocebus atys" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005938 GO:GO:0005634
GO:GO:0007165 GO:GO:0042981 GO:GO:0005811 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 HOVERGEN:HBG060248
PANTHER:PTHR10131:SF48 EMBL:EU204928 ProteinModelPortal:B6CJY4
Uniprot:B6CJY4
Length = 522
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSV 71
+ PP ++ CPIC +REA T CGH FC +CI K + + KCP + L + N +
Sbjct: 59 EFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE-NQL 117
Query: 72 FP-NFLLNELV 81
FP NF E++
Sbjct: 118 FPDNFAKREIL 128
>UNIPROTKB|B6CJY5 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9544 "Macaca mulatta" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005886 GO:GO:0005938 GO:GO:0048471
GO:GO:0042981 GO:GO:0050852 GO:GO:0005811 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070555 GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907
GO:GO:0070534 SUPFAM:SSF49599 GO:GO:0045672 GO:GO:0032743
GO:GO:0043507 GO:GO:2000679 GO:GO:0002726 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
PANTHER:PTHR10131:SF48 EMBL:EU204929 RefSeq:NP_001129268.1
UniGene:Mmu.17706 STRING:B6CJY5 GeneID:716907 KEGG:mcc:716907
NextBio:19981456 Uniprot:B6CJY5
Length = 522
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSV 71
+ PP ++ CPIC +REA T CGH FC +CI K + + KCP + L + N +
Sbjct: 59 EFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE-NQL 117
Query: 72 FP-NFLLNELV 81
FP NF E++
Sbjct: 118 FPDNFAKREIL 128
>MGI|MGI:108072 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IMP] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0002726 "positive regulation of T cell cytokine production"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006461 "protein complex assembly" evidence=ISO]
[GO:0006955 "immune response" evidence=IMP] [GO:0007165 "signal
transduction" evidence=IDA;TAS] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=ISO] [GO:0007254 "JNK
cascade" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IGI] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=ISO] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IMP] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0031996 "thioesterase binding" evidence=ISO] [GO:0032147
"activation of protein kinase activity" evidence=ISO] [GO:0032743
"positive regulation of interleukin-2 production" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042088
"T-helper 1 type immune response" evidence=IMP] [GO:0042102
"positive regulation of T cell proliferation" evidence=IMP]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IMP] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043422 "protein kinase B binding"
evidence=ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IMP] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IMP] [GO:0045453 "bone resorption" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046849 "bone remodeling" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048468 "cell development" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISO] [GO:0050852 "T cell receptor signaling
pathway" evidence=ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0051865 "protein
autoubiquitination" evidence=ISO;TAS] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;IDA]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:108072 Prosite:PS00518 GO:GO:0005829
GO:GO:0005938 GO:GO:0048471 GO:GO:0042981 GO:GO:0019886
GO:GO:0050852 GO:GO:0042088 GO:GO:0007254 GO:GO:0005811
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0031965
GO:GO:0048661 GO:GO:0045944 Reactome:REACT_115202 EMBL:CH466519
GO:GO:0000122 GO:GO:0004871 Reactome:REACT_107772 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102 GO:GO:0001843
GO:GO:0042475 GO:GO:0045453 GO:GO:0004842 GO:GO:0001503
GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534
GO:GO:0048468 GO:GO:0051865 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AL929571 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:D84655
EMBL:AK041172 EMBL:AK155434 EMBL:BC060705 IPI:IPI00136488
IPI:IPI00222919 RefSeq:NP_033450.2 UniGene:Mm.292729 HSSP:Q9Y4K3
ProteinModelPortal:P70196 SMR:P70196 DIP:DIP-29812N IntAct:P70196
MINT:MINT-252449 STRING:P70196 PhosphoSite:P70196 PRIDE:P70196
Ensembl:ENSMUST00000004949 GeneID:22034 KEGG:mmu:22034
UCSC:uc008lhl.1 UCSC:uc008lhm.1 InParanoid:Q6P9M0 NextBio:301798
Bgee:P70196 CleanEx:MM_TRAF6 Genevestigator:P70196
GermOnline:ENSMUSG00000027164 Uniprot:P70196
Length = 530
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSV 71
+ PP ++ CPIC +REA T CGH FC +CI K + + KCP + L + N +
Sbjct: 59 EFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE-NQL 117
Query: 72 FP-NFLLNELV 81
FP NF E++
Sbjct: 118 FPDNFAKREIL 128
>ZFIN|ZDB-GENE-020620-2 [details] [associations]
symbol:bty "bloodthirsty" species:7955 "Danio rerio"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-020620-2
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0030218 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862 IPI:IPI00962937
EMBL:AY454307 RefSeq:NP_001018311.1 UniGene:Dr.23709
ProteinModelPortal:Q5DSV6 PRIDE:Q5DSV6 GeneID:246711
KEGG:dre:246711 CTD:246711 NextBio:20797216 Uniprot:Q5DSV6
Length = 532
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFP 73
+P +L C IC E+ + T CGH FC SC++KC CP C + +
Sbjct: 6 NPLSEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCSCPYCKETFTQRPDLKI 65
Query: 74 NFLLNELVQKHKIKSAQD 91
N L E+ + +K K ++
Sbjct: 66 NTTLREISEHYKEKRPEE 83
>ZFIN|ZDB-GENE-080213-2 [details] [associations]
symbol:btr18 "bloodthirsty-related gene family,
member 18" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-080213-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030005
Ensembl:ENSDART00000013850 Bgee:I3IT62 Uniprot:I3IT62
Length = 533
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFP 73
+P +L C +C E+ + T CGH FC SC++KC CP C + +
Sbjct: 4 NPLSEELQCSVCLEVFTDPVSTPCGHNFCRSCLNKCWNNSETCSCPYCKETFTQRPDLKI 63
Query: 74 NFLLNELVQKHKIKSAQD 91
N L E+ + +K K ++
Sbjct: 64 NTTLREISEHYKEKKPEE 81
>UNIPROTKB|Q32LH8 [details] [associations]
symbol:RAD18 "RAD18 protein" species:9913 "Bos taurus"
[GO:0045910 "negative regulation of DNA recombination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001741 "XY
body" evidence=IEA] [GO:0000785 "chromatin" evidence=IEA]
[GO:0000403 "Y-form DNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 GO:GO:0009411 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0007283
Gene3D:1.10.720.30 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0005657 GO:GO:0000403
GO:GO:0045910 eggNOG:COG5432 KO:K10627 CTD:56852
HOGENOM:HOG000234845 HOVERGEN:HBG054721 OMA:HSKYRKK
GeneTree:ENSGT00390000011230 EMBL:DAAA02053765 EMBL:DAAA02053766
EMBL:DAAA02053767 EMBL:DAAA02053768 EMBL:DAAA02053769
EMBL:DAAA02053770 EMBL:BC109568 IPI:IPI00702052
RefSeq:NP_001030372.2 UniGene:Bt.26308 STRING:Q32LH8
Ensembl:ENSBTAT00000047319 GeneID:514440 KEGG:bta:514440
InParanoid:Q32LH8 OrthoDB:EOG4RFKTF NextBio:20871333 Uniprot:Q32LH8
Length = 456
Score = 118 (46.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 20 NDLL-CPICFELIREAH-ITRCGHTFCFSCISKCVELQIKCPKCSASL--PDM--NSVFP 73
+DLL C ICFE A I +C H +C CI K + + +CP C ++ PD+ N V
Sbjct: 20 DDLLRCGICFEYFNIAMMIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRVLD 79
Query: 74 NFLLN-ELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+ N + H ++ A +S + +S S+NL+
Sbjct: 80 ELVKNLNFARNHLLQFALESPPI-SAASSSSKNLA 113
>UNIPROTKB|Q3ZCC3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9913 "Bos taurus" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0045410 "positive regulation of interleukin-6 biosynthetic
process" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042088 "T-helper 1 type immune
response" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0032743 "positive regulation of interleukin-2
production" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031666 "positive regulation of lipopolysaccharide-mediated
signaling pathway" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007249
"I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0042981 GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 GO:GO:0005811 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0031965 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 GeneTree:ENSGT00550000074359 EMBL:DQ319074
EMBL:DQ407276 EMBL:BC102522 IPI:IPI00710621 RefSeq:NP_001029833.1
UniGene:Bt.89201 ProteinModelPortal:Q3ZCC3 SMR:Q3ZCC3 STRING:Q3ZCC3
PRIDE:Q3ZCC3 Ensembl:ENSBTAT00000021630 GeneID:539124
KEGG:bta:539124 CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625
HOVERGEN:HBG060248 InParanoid:Q3ZCC3 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV NextBio:20877796 PANTHER:PTHR10131:SF48
Uniprot:Q3ZCC3
Length = 542
Score = 119 (46.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSV 71
+ PP ++ CPIC +REA T CGH FC +CI K + + KCP + L + N +
Sbjct: 60 EFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE-NQL 118
Query: 72 FP-NFLLNELV 81
FP NF E++
Sbjct: 119 FPDNFAKREIL 129
>ZFIN|ZDB-GENE-070912-196 [details] [associations]
symbol:ftr12 "finTRIM family, member 12"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-196 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 EMBL:BX005083 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 IPI:IPI00637143
Ensembl:ENSDART00000056161 Bgee:F1QYZ8 Uniprot:F1QYZ8
Length = 547
Score = 119 (46.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C +C EL++++ CGH++C SCIS C + CP+C + ++ N +L
Sbjct: 15 CSLCLELLKDSVAIPCGHSYCMSCISDCWDQDEQKGVYSCPQCRQTFTPRPALGKNTMLT 74
Query: 79 ELVQKHK 85
E+V+K K
Sbjct: 75 EVVEKLK 81
>ZFIN|ZDB-GENE-090507-6 [details] [associations]
symbol:ftr41 "finTRIM family, member 41" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-090507-6 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:BX769173 IPI:IPI00510701 Ensembl:ENSDART00000055690
Bgee:E7FB95 Uniprot:E7FB95
Length = 550
Score = 119 (46.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKC----VELQI-KCPKCSASLPDMNSVFPNF 75
+ +CP+C +L+++ CGH++C SCI+ E +I CP+C S ++ N
Sbjct: 25 EFMCPVCLDLLKDPVTLHCGHSYCKSCITDFWDQEYEKRIYSCPQCRQSFTPRPALAKNT 84
Query: 76 LLNELVQKHKIKSAQDSD 93
+L E+V+K K K+ +D
Sbjct: 85 MLAEVVEKLK-KTKPPAD 101
>UNIPROTKB|E2RDE8 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0046849 "bone remodeling" evidence=IEA] [GO:0045672 "positive
regulation of osteoclast differentiation" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF48
EMBL:AAEX03011373 Ensembl:ENSCAFT00000010962 OMA:CLMALRN
Uniprot:E2RDE8
Length = 562
Score = 119 (46.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSV 71
+ PP ++ CPIC +REA T CGH FC +CI K + + KCP + L + N +
Sbjct: 59 EFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE-NQL 117
Query: 72 FP-NFLLNELV 81
FP NF E++
Sbjct: 118 FPDNFAKREIL 128
>RGD|1307609 [details] [associations]
symbol:Trim13 "tripartite motif-containing 13" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA;ISO] [GO:0007165
"signal transduction" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA;ISO] [GO:0010942 "positive regulation of cell death"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016239 "positive regulation of macroautophagy"
evidence=IEA;ISO] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA;ISO] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=IEA;ISO] [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA;ISO] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 UniPathway:UPA00143 RGD:1307609 Prosite:PS00518
GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0010332 GO:GO:0004871 GO:GO:0010942
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038
GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
CTD:10206 KO:K12003 GeneTree:ENSGT00690000101726
HOGENOM:HOG000290663 OMA:QPLNIFC HOVERGEN:HBG056536
OrthoDB:EOG46MBJP EMBL:CH474023 EMBL:BC088425 IPI:IPI00198603
RefSeq:NP_001012210.1 UniGene:Rn.83735 ProteinModelPortal:Q5M7V1
PRIDE:Q5M7V1 Ensembl:ENSRNOT00000012035 GeneID:364398
KEGG:rno:364398 UCSC:RGD:1307609 eggNOG:maNOG12208
InParanoid:Q5M7V1 NextBio:685325 Genevestigator:Q5M7V1
Uniprot:Q5M7V1
Length = 407
Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 34/127 (26%), Positives = 54/127 (42%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI----------KCPKC--SASLP 66
+ DL CPIC L + + C H FC C+ +E + KCP C S
Sbjct: 5 EEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKETSAT 64
Query: 67 DMNSVFPNFLLNELVQKH-KIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQR-KHL 124
+NS+ N+ L +V+K+ KIK + ++ + + D+ L+ V R H
Sbjct: 65 GVNSLQVNYSLKGIVEKYNKIKISPKMPVCKEHLGQPLNIFCVTDMQLICGVCATRGSHT 124
Query: 125 LEAESSV 131
SS+
Sbjct: 125 KHVFSSI 131
>GENEDB_PFALCIPARUM|PF11_0244 [details] [associations]
symbol:PF11_0244 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 120 (47.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
+++ C IC +L+ CGH FC CI K E + CP C +++ D ++ N LL E
Sbjct: 221 SEVECAICMKLLIVPVTIPCGHNFCRDCIEKAKEYKNLCPLCRSNMGDKKNI--NLLLGE 278
Query: 80 LV-QKHKIKSAQDSDGLRDFVASESQNLSLPDVN 112
L+ QK+ + ++ + + + + + + +N
Sbjct: 279 LIKQKYPLTYSKRLEEIENLKLEQEKKVIKERIN 312
>UNIPROTKB|Q8IID0 [details] [associations]
symbol:PF11_0244 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AE014186 RefSeq:XP_001347915.1
ProteinModelPortal:Q8IID0 IntAct:Q8IID0 MINT:MINT-1640413
PRIDE:Q8IID0 EnsemblProtists:PF11_0244:mRNA GeneID:810791
KEGG:pfa:PF11_0244 EuPathDB:PlasmoDB:PF3D7_1123300
ProtClustDB:CLSZ2432487 Uniprot:Q8IID0
Length = 689
Score = 120 (47.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNE 79
+++ C IC +L+ CGH FC CI K E + CP C +++ D ++ N LL E
Sbjct: 221 SEVECAICMKLLIVPVTIPCGHNFCRDCIEKAKEYKNLCPLCRSNMGDKKNI--NLLLGE 278
Query: 80 LV-QKHKIKSAQDSDGLRDFVASESQNLSLPDVN 112
L+ QK+ + ++ + + + + + + +N
Sbjct: 279 LIKQKYPLTYSKRLEEIENLKLEQEKKVIKERIN 312
>TAIR|locus:2049023 [details] [associations]
symbol:AT2G23780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006661 "phosphatidylinositol biosynthetic
process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC004482 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
HSSP:P22681 EMBL:BT008560 EMBL:BT008701 EMBL:AK229514
IPI:IPI00539367 PIR:T02413 RefSeq:NP_179958.1 UniGene:At.12626
ProteinModelPortal:O64824 SMR:O64824 EnsemblPlants:AT2G23780.1
GeneID:816910 KEGG:ath:AT2G23780 TAIR:At2g23780 InParanoid:O64824
OMA:VNGESST PhylomeDB:O64824 ProtClustDB:CLSN2912869
ArrayExpress:O64824 Genevestigator:O64824 Uniprot:O64824
Length = 227
Score = 112 (44.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI---KC 58
S+TST + D C ICFEL ++ +T CGH FC+ C+ + + +C
Sbjct: 6 SSTSTSYSDSNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQEC 65
Query: 59 PKCSASLPD 67
P C A + D
Sbjct: 66 PVCKAVVQD 74
>UNIPROTKB|Q86UV6 [details] [associations]
symbol:TRIM74 "Tripartite motif-containing protein 74"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC005488 KO:K12024
HOGENOM:HOG000081784 HOVERGEN:HBG094091 EMBL:AF498999 EMBL:BC033871
IPI:IPI00328816 IPI:IPI00789257 RefSeq:NP_942150.1
UniGene:Hs.645328 ProteinModelPortal:Q86UV6 SMR:Q86UV6
IntAct:Q86UV6 STRING:Q86UV6 DMDM:56404879 PRIDE:Q86UV6 DNASU:378108
Ensembl:ENST00000285805 Ensembl:ENST00000395244
Ensembl:ENST00000571453 Ensembl:ENST00000573986 GeneID:378108
KEGG:hsa:378108 UCSC:uc003tws.1 UCSC:uc010lao.2 CTD:378108
GeneCards:GC07M072430 HGNC:HGNC:17453 MIM:612550 neXtProt:NX_Q86UV6
PharmGKB:PA38454 InParanoid:Q86UV6 OMA:REARTFH OrthoDB:EOG49ZXR6
PhylomeDB:Q86UV6 GenomeRNAi:378108 NextBio:100709
ArrayExpress:Q86UV6 Bgee:Q86UV6 CleanEx:HS_TRIM74
Genevestigator:Q86UV6 GermOnline:ENSG00000155428 Uniprot:Q86UV6
Length = 250
Score = 113 (44.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
L CPIC E+ +E+ + +CGH++C C+ S ++ +++CP C + D +S PN L
Sbjct: 14 LQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCW-QVVDGSSSLPNVSLA 72
Query: 79 ELVQ 82
+++
Sbjct: 73 WVIE 76
>UNIPROTKB|Q86XT4 [details] [associations]
symbol:TRIM50 "E3 ubiquitin-protein ligase TRIM50"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0043231 GO:GO:0005737 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AC073841
HOGENOM:HOG000234133 EMBL:AY081948 EMBL:AY081949 IPI:IPI00173642
IPI:IPI00477038 RefSeq:NP_835226.1 UniGene:Hs.647053
ProteinModelPortal:Q86XT4 SMR:Q86XT4 STRING:Q86XT4
PhosphoSite:Q86XT4 DMDM:56404881 PRIDE:Q86XT4
Ensembl:ENST00000333149 Ensembl:ENST00000453152 GeneID:135892
KEGG:hsa:135892 UCSC:uc003txy.1 UCSC:uc003txz.1 CTD:135892
GeneCards:GC07M072726 HGNC:HGNC:19017 HPA:HPA019862 MIM:612548
neXtProt:NX_Q86XT4 PharmGKB:PA38778 eggNOG:NOG245385
HOVERGEN:HBG106596 InParanoid:Q86XT4 KO:K12024 OMA:TFFDADR
OrthoDB:EOG4RNB87 PhylomeDB:Q86XT4 GenomeRNAi:135892 NextBio:83506
ArrayExpress:Q86XT4 Bgee:Q86XT4 CleanEx:HS_TRIM50
Genevestigator:Q86XT4 GermOnline:ENSG00000146755 Uniprot:Q86XT4
Length = 487
Score = 118 (46.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISK--C-VELQIKCPKCSASLPDMNSVFPNFLLN 78
L CPIC E+ +E + +CGH++C C+ C ++ +++CP C ++ D +S PN L
Sbjct: 14 LQCPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAV-DGSSSLPNVSLA 72
Query: 79 ELVQ 82
+++
Sbjct: 73 RVIE 76
>UNIPROTKB|Q9NS91 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0045910 "negative
regulation of DNA recombination" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=NAS] [GO:0006281 "DNA repair" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] [GO:0000403 "Y-form DNA binding"
evidence=IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031593
"polyubiquitin binding" evidence=IDA] InterPro:IPR001841
InterPro:IPR003034 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0009411
GO:GO:0046872 GO:GO:0003684 GO:GO:0016874 GO:GO:0008270
GO:GO:0006281 GO:GO:0000785 GO:GO:0007283 GO:GO:0016567
Gene3D:1.10.720.30 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031593 InterPro:IPR017907 GO:GO:0001741 GO:GO:0005657
GO:GO:0000403 GO:GO:0045910 eggNOG:COG5432 KO:K10627 EMBL:AB035274
EMBL:AF169796 EMBL:AY004333 EMBL:AK023075 EMBL:AY961989
EMBL:AC008151 EMBL:AC034186 EMBL:BC001302 IPI:IPI00024579
RefSeq:NP_064550.3 UniGene:Hs.375684 PDB:2Y43 PDB:2YBF PDBsum:2Y43
PDBsum:2YBF ProteinModelPortal:Q9NS91 SMR:Q9NS91 DIP:DIP-29831N
IntAct:Q9NS91 STRING:Q9NS91 PhosphoSite:Q9NS91 DMDM:21362876
PaxDb:Q9NS91 PeptideAtlas:Q9NS91 PRIDE:Q9NS91 DNASU:56852
Ensembl:ENST00000264926 GeneID:56852 KEGG:hsa:56852 UCSC:uc003brd.3
CTD:56852 GeneCards:GC03M008896 H-InvDB:HIX0003022 HGNC:HGNC:18278
MIM:605256 neXtProt:NX_Q9NS91 PharmGKB:PA134912253
HOGENOM:HOG000234845 HOVERGEN:HBG054721 InParanoid:Q9NS91
OMA:HSKYRKK PhylomeDB:Q9NS91 GenomeRNAi:56852 NextBio:62262
ArrayExpress:Q9NS91 Bgee:Q9NS91 CleanEx:HS_RAD18
Genevestigator:Q9NS91 GermOnline:ENSG00000070950 Uniprot:Q9NS91
Length = 495
Score = 118 (46.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 20 NDLL-CPICFELIREAHIT-RCGHTFCFSCISKCVELQIKCPKCSASL--PDMNSVFPNF 75
+DLL C ICFE A I +C H +C CI K + + +CP C ++ PD+ + N
Sbjct: 20 DDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKN---NR 76
Query: 76 LLNELVQK------HKIKSAQDSDGLRDFVASESQNLSL 108
+L+ELV+ H ++ A +S + +S S+NL++
Sbjct: 77 ILDELVKSLNFARNHLLQFALESPA-KSPASSSSKNLAV 114
>UNIPROTKB|J3KQW6 [details] [associations]
symbol:TRIM73 "Tripartite motif-containing protein 73"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC006014 HGNC:HGNC:18162
ProteinModelPortal:J3KQW6 Ensembl:ENST00000430211 OMA:HHEFIQK
Uniprot:J3KQW6
Length = 282
Score = 114 (45.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 21/67 (31%), Positives = 41/67 (61%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CPIC E+ +E+ + +CGH++C C+ S ++ +++CP C + D +S PN
Sbjct: 11 EDRLQCPICLEVFKESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCW-QVVDGSSSLPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLAWVIE 76
>UNIPROTKB|F1Q125 [details] [associations]
symbol:TRIM68 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 OMA:MQKLEQN EMBL:AAEX03012846
Ensembl:ENSCAFT00000009822 Uniprot:F1Q125
Length = 438
Score = 117 (46.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 38/131 (29%), Positives = 59/131 (45%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-------IKCPKCSASLPDMNSVFP 73
++ CPIC +RE CGH+FC SC+S E+ CP C A + N + P
Sbjct: 13 EVACPICMTFLREPVSIDCGHSFCHSCLSGLWEVPGESQNWGYTCPLCRAPVQPRN-LRP 71
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL---PDVNLMLEVLNQR-KHLLEAE 128
N+ L +V+K + GL+ D + L + D ++ E +Q +H EA
Sbjct: 72 NWQLANVVEKVHLLGLHPGMGLKGDVCELHGEQLKMFCKEDGLIICETCSQSSEH--EAH 129
Query: 129 SSVAQYKLLYE 139
S V + +E
Sbjct: 130 SVVPMEDVTWE 140
>FB|FBgn0028847 [details] [associations]
symbol:CG9014 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031386 "protein
tag" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014134 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599 Gene3D:3.90.890.10
HSSP:P15919 GeneTree:ENSGT00530000063647 KO:K11981 EMBL:BT003232
RefSeq:NP_609668.2 UniGene:Dm.12062 SMR:Q9VJW5 IntAct:Q9VJW5
MINT:MINT-313528 STRING:Q9VJW5 EnsemblMetazoa:FBtr0080579
GeneID:34777 KEGG:dme:Dmel_CG9014 UCSC:CG9014-RA
FlyBase:FBgn0028847 eggNOG:NOG250957 InParanoid:Q9VJW5 OMA:HVDEELI
OrthoDB:EOG49CNQ9 GenomeRNAi:34777 NextBio:790166 Uniprot:Q9VJW5
Length = 328
Score = 115 (45.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 19 DNDLLCPICFELIRE-AHITRCGHTFCFSCISK-CVELQIKCPKCSASLPDMNSVFPNFL 76
D +L+CPIC +++ E + C H FC +CI K ++ QI CP + L + V + L
Sbjct: 13 DEELICPICTDVLEEPVQSSECEHAFCRACIDKWMIQKQI-CPVDRSGLLTSHLVPVSRL 71
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASE 102
+ ++ + KIK G +A E
Sbjct: 72 MRNMLSRLKIKCTFSQSGCAQMLALE 97
>WB|WBGene00018248 [details] [associations]
symbol:F40G9.14 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:KOG4185 EMBL:FO081347
GeneTree:ENSGT00530000067378 PIR:T33624 RefSeq:NP_497169.1
ProteinModelPortal:Q9TZ74 SMR:Q9TZ74 EnsemblMetazoa:F40G9.14
GeneID:185560 KEGG:cel:CELE_F40G9.14 UCSC:F40G9.14 CTD:185560
WormBase:F40G9.14 InParanoid:Q9TZ74 NextBio:928706 Uniprot:Q9TZ74
Length = 261
Score = 113 (44.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 24 CPICFELI-----REAHITRCGHTFCFSCISKCV-ELQIKCPKCSASLPDMNSVFPNFLL 77
C ICFE R + CGHT+C SCI C + QIKCP C+ + +N +L
Sbjct: 138 CKICFEKYEVTGNRSPRVFNCGHTYCESCIQVCKHQFQIKCPFCTTTSYQINFSTNKLIL 197
Query: 78 NELVQKHK 85
L K K
Sbjct: 198 EVLNGKSK 205
>UNIPROTKB|C9IY67 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC024221 HGNC:HGNC:30834 IPI:IPI00946493
ProteinModelPortal:C9IY67 SMR:C9IY67 STRING:C9IY67
Ensembl:ENST00000496222 HOGENOM:HOG000199013 ArrayExpress:C9IY67
Bgee:C9IY67 Uniprot:C9IY67
Length = 179
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 23/101 (22%), Positives = 48/101 (47%)
Query: 7 PSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVE------------L 54
P+ + ++ + +L CPIC+ + + + C HTFC +C+ ++ +
Sbjct: 21 PNHEINKEMHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRI 80
Query: 55 QIKCPKCSASL---PD-MNSVFPNFLLNELVQKHKIKSAQD 91
+KCP C + P + S+ NF L +++K++ + D
Sbjct: 81 PLKCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPD 121
>ZFIN|ZDB-GENE-030616-515 [details] [associations]
symbol:ftr53 "finTRIM family, member 53"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-030616-515 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 EMBL:BX510646 IPI:IPI00866649
Ensembl:ENSDART00000060425 Bgee:F1R783 Uniprot:F1R783
Length = 545
Score = 118 (46.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
CP+C +L+ + CGH++C SCI+ C + CP+C + ++ N +L
Sbjct: 13 CPVCLDLLNDPVTIPCGHSYCKSCITGCWNQEDQRGVYSCPQCRQAYSPRPTLGKNTILG 72
Query: 79 ELVQK-HKIKSAQD 91
E+V+K KIK D
Sbjct: 73 EMVEKLKKIKLPAD 86
>ZFIN|ZDB-GENE-090507-7 [details] [associations]
symbol:ftr42 "finTRIM family, member 42" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-090507-7 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:BX769173 IPI:IPI01006724 Ensembl:ENSDART00000074444
Bgee:E7F511 Uniprot:E7F511
Length = 545
Score = 118 (46.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
++ LCP+C +L+++ CGH++C SCI+ ++ CP+C + ++ N
Sbjct: 9 DEFLCPVCLDLLKDLVAIHCGHSYCKSCITDFWNMEDEKGIYSCPQCRQTFSPRPALAKN 68
Query: 75 FLLNELVQKHKIKSAQDSD 93
+L E+V K K K+ +D
Sbjct: 69 TMLAEVVDKLK-KTTPPAD 86
>ZFIN|ZDB-GENE-070705-379 [details] [associations]
symbol:btr27 "bloodthirsty-related gene family,
member 27" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-379 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
eggNOG:NOG252602 OrthoDB:EOG4BVRTF HOVERGEN:HBG106862 EMBL:CR853286
IPI:IPI00962937 Ensembl:ENSDART00000132370
GeneTree:ENSGT00660000095328 Uniprot:A5WUZ3
Length = 549
Score = 118 (46.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFP 73
+P +L C IC E+ + T CGH FC SC++KC CP C + +
Sbjct: 31 NPLSEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCSCPYCKETFRHRPDLKI 90
Query: 74 NFLLNELVQKHKIKSAQD 91
N L E+ + +K K ++
Sbjct: 91 NTTLREISEHYKEKKPEE 108
>UNIPROTKB|Q865W2 [details] [associations]
symbol:TRIM50 "E3 ubiquitin-protein ligase TRIM50"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 OMA:TFFDADR
OrthoDB:EOG4RNB87 EMBL:AY081951 RefSeq:NP_999351.1
UniGene:Ssc.17223 ProteinModelPortal:Q865W2
Ensembl:ENSSSCT00000008446 GeneID:397383 KEGG:ssc:397383
ArrayExpress:Q865W2 Uniprot:Q865W2
Length = 486
Score = 117 (46.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNF 75
++ L CP+C E+ +E + +CGH++C C+ S+ ++ +++CP C + D +S PN
Sbjct: 11 EDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEV-DSSSSPPNV 69
Query: 76 LLNELVQ 82
L +++
Sbjct: 70 SLARVIE 76
>UNIPROTKB|B0V297 [details] [associations]
symbol:TRIM27 "Zinc finger protein RFP" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HOVERGEN:HBG001357
UniGene:Hs.440382 HGNC:HGNC:9975 ChiTaRS:TRIM27 EMBL:CR936876
EMBL:CR936883 EMBL:CR936965 IPI:IPI00893697 SMR:B0V297
Ensembl:ENST00000430891 Ensembl:ENST00000436621
Ensembl:ENST00000437415 Ensembl:ENST00000455861 Uniprot:B0V297
Length = 249
Score = 112 (44.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNFLLNEL 80
CP+C + E + CGH C +C+++C E + CP+C + P + + PN L +
Sbjct: 16 CPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRH-MRPNRHLANV 74
Query: 81 VQ 82
Q
Sbjct: 75 TQ 76
>UNIPROTKB|H7C5V9 [details] [associations]
symbol:LONRF1 "LON peptidase N-terminal domain and RING
finger protein 1" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:AC123777 HGNC:HGNC:26302 Ensembl:ENST00000524526 Bgee:H7C5V9
Uniprot:H7C5V9
Length = 376
Score = 115 (45.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 26/91 (28%), Positives = 42/91 (46%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+D C +C L E T CGH+FC +C+ +C++ CP C SL + L
Sbjct: 78 SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQL 137
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ K+ + + D +E +L+
Sbjct: 138 LEELIVKYLPDELSERKKIYDEETAELSHLT 168
>ZFIN|ZDB-GENE-030131-2801 [details] [associations]
symbol:ftr56 "finTRIM family, member 56"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-030131-2801 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:BX294130
GeneTree:ENSGT00670000097622 HOGENOM:HOG000234136
HOVERGEN:HBG106862 IPI:IPI00494442 RefSeq:XP_003200605.1
UniGene:Dr.12268 UniGene:Dr.27903 Ensembl:ENSDART00000103703
GeneID:561680 KEGG:dre:561680 CTD:561680 InParanoid:Q1LXS0
OMA:WHHEDEK NextBio:20884043 Uniprot:Q1LXS0
Length = 561
Score = 105 (42.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCV----ELQI-KCPKCSASLPDMNSVFPNFLLN 78
CP+C EL++ CGH++C SCI+ E ++ CP+C + ++ N +L
Sbjct: 13 CPVCLELLKNPVAIPCGHSYCMSCITDYWHHEDEKRVYSCPQCRQTFSPRPALNKNTMLA 72
Query: 79 ELVQKHK 85
E+V++ K
Sbjct: 73 EVVEQLK 79
Score = 34 (17.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 95 LRDFVASESQNLS 107
L DF E++N+S
Sbjct: 338 LEDFCREETENIS 350
>ZFIN|ZDB-GENE-081104-54 [details] [associations]
symbol:ftr51 "finTRIM family, member 51"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081104-54 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:CU104731 IPI:IPI00860861 Ensembl:ENSDART00000132323
Bgee:F1Q5R2 Uniprot:F1Q5R2
Length = 530
Score = 117 (46.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
++ CP+C +L++ CGH++C SCI+ C + + CP+C + ++ N
Sbjct: 9 DEFTCPVCLDLLKHPAAIPCGHSYCKSCITDCWDQEEEKGVYSCPQCRQTFSLRPALAKN 68
Query: 75 FLLNELVQKHKIKSAQDSD 93
+L E+V+K K K+ +D
Sbjct: 69 TILAEVVEKLK-KTKPPAD 86
>UNIPROTKB|F8WFA6 [details] [associations]
symbol:RAD18 "E3 ubiquitin-protein ligase RAD18"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC068312 EMBL:AC008151
EMBL:AC034186 HGNC:HGNC:18278 IPI:IPI00925824
ProteinModelPortal:F8WFA6 SMR:F8WFA6 Ensembl:ENST00000421052
ArrayExpress:F8WFA6 Bgee:F8WFA6 Uniprot:F8WFA6
Length = 126
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 20 NDLL-CPICFELIREAHIT-RCGHTFCFSCISKCVELQIKCPKCSASL--PDMNSVFPNF 75
+DLL C ICFE A I +C H +C CI K + + +CP C ++ PD+ + N
Sbjct: 20 DDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKN---NR 76
Query: 76 LLNEL 80
+L+EL
Sbjct: 77 ILDEL 81
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
+N+L C IC E EA C H+FC CI++ ++ +++CP C D+ S + +L+
Sbjct: 48 ENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRK---DIKSKTHSLVLD 104
Query: 79 ELVQK 83
+ K
Sbjct: 105 NCINK 109
>UNIPROTKB|C9J060 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00239700 ProteinModelPortal:C9J060 SMR:C9J060 STRING:C9J060
PRIDE:C9J060 Ensembl:ENST00000425490 ArrayExpress:C9J060
Bgee:C9J060 Uniprot:C9J060
Length = 203
Score = 109 (43.4 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-------KCPKCSASLPDMNSV 71
+ ++ CPIC EL+ E CGH+FC +CI+ ++ + CP C N +
Sbjct: 10 EKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN-L 68
Query: 72 FPNFLLNELVQKHK-IKSAQDSDGLRDFVASESQNLSL 108
PN L +V++ K +K + RD + L +
Sbjct: 69 RPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQI 106
>UNIPROTKB|H0YFN9 [details] [associations]
symbol:RNF10 "RING finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC063943 HGNC:HGNC:10055 ChiTaRS:RNF10
Ensembl:ENST00000542207 Uniprot:H0YFN9
Length = 183
Score = 107 (42.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 36/126 (28%), Positives = 59/126 (46%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ----IKCPKCSASL--PDMNSVFPN--- 74
CPIC A ITRCGH FC++CI + L KCP C +S+ D+ SV
Sbjct: 23 CPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLKSVVATESH 82
Query: 75 -FLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQ 133
+++ + + +K ++ L S+ N+ P ++L E +Q LL A
Sbjct: 83 QYVVGDTITMQLMK--REKGVLVALPKSKWMNVDHP-IHLGDEQHSQYSKLLLASKEQVL 139
Query: 134 YKLLYE 139
++++ E
Sbjct: 140 HRVVLE 145
>UNIPROTKB|Q86WT6 [details] [associations]
symbol:TRIM69 "E3 ubiquitin-protein ligase TRIM69"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005737 GO:GO:0006915
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG001357 HSSP:Q92021
EMBL:AF302088 EMBL:AF302089 EMBL:DQ232883 EMBL:AY305385
EMBL:AC122108 EMBL:BC024199 EMBL:BC033314 EMBL:BC047945
IPI:IPI00412458 IPI:IPI00418445 IPI:IPI00791890 IPI:IPI00929505
RefSeq:NP_542783.2 RefSeq:NP_892030.3 UniGene:Hs.489254
UniGene:Hs.733913 ProteinModelPortal:Q86WT6 SMR:Q86WT6
IntAct:Q86WT6 MINT:MINT-1465642 STRING:Q86WT6 PhosphoSite:Q86WT6
DMDM:229462760 PaxDb:Q86WT6 PRIDE:Q86WT6 DNASU:140691
Ensembl:ENST00000329464 Ensembl:ENST00000338264
Ensembl:ENST00000558173 Ensembl:ENST00000558329
Ensembl:ENST00000559390 Ensembl:ENST00000560442 GeneID:140691
KEGG:hsa:140691 UCSC:uc001zuf.2 UCSC:uc001zuh.1 UCSC:uc010bdy.1
CTD:140691 GeneCards:GC15P045025 HGNC:HGNC:17857 HPA:HPA028894
neXtProt:NX_Q86WT6 PharmGKB:PA162407010 eggNOG:NOG296667 KO:K12034
OMA:IAAHKEN PhylomeDB:Q86WT6 GenomeRNAi:140691 NextBio:84243
Bgee:Q86WT6 CleanEx:HS_TRIM69 Genevestigator:Q86WT6 Uniprot:Q86WT6
Length = 500
Score = 116 (45.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPKCSASLPDMNSVFPNFLL 77
+L CP+C + R+ + CGH FC +CI LQ K CP+C N F N +L
Sbjct: 38 ELHCPLCNDWFRDPLMLSCGHNFCEACIQDFWRLQAKETFCPECKMLCQYNNCTF-NPVL 96
Query: 78 NELVQKHK 85
++LV+K K
Sbjct: 97 DKLVEKIK 104
>DICTYBASE|DDB_G0285333 [details] [associations]
symbol:DDB_G0285333 "RING finger protein 185"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0285333 Prosite:PS00518 GO:GO:0046872
EMBL:AAFI02000079 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5574 KO:K10666
RefSeq:XP_638242.1 ProteinModelPortal:Q54ND8
EnsemblProtists:DDB0186444 GeneID:8625050 KEGG:ddi:DDB_G0285333
InParanoid:Q54ND8 OMA:CIFQWLQ Uniprot:Q54ND8
Length = 281
Score = 112 (44.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCP 59
S S+ S+ ++Q + C ICF+ + E +T+CGH FC++CI + ++ +CP
Sbjct: 51 SEQSSSSQQQQQQQQQQSSPFECNICFDDVSEPVVTQCGHLFCWTCIFQWLQHNSSQQCP 110
Query: 60 KCSASL 65
C A +
Sbjct: 111 VCKAPI 116
>UNIPROTKB|F1NDX0 [details] [associations]
symbol:LOC100859635 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00440000035370 EMBL:AADN02016908
IPI:IPI00681507 Ensembl:ENSGALT00000032949 ArrayExpress:F1NDX0
Uniprot:F1NDX0
Length = 742
Score = 118 (46.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 19 DNDLLCPICFELIREAHI-TRCGHTFCFSCISKCVELQIKCPKCS 62
D D CPIC E I + I T+C H FC SCI K +E + CP C+
Sbjct: 558 DTDDTCPICMEKIVDKEILTKCKHVFCKSCIKKALEYKQTCPVCN 602
>UNIPROTKB|F1NFB8 [details] [associations]
symbol:LOC100859635 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0006974 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0010390 GeneTree:ENSGT00440000035370
OMA:GIQKGNQ EMBL:AADN02016908 IPI:IPI00577596
Ensembl:ENSGALT00000019727 ArrayExpress:F1NFB8 Uniprot:F1NFB8
Length = 743
Score = 118 (46.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 19 DNDLLCPICFELIREAHI-TRCGHTFCFSCISKCVELQIKCPKCS 62
D D CPIC E I + I T+C H FC SCI K +E + CP C+
Sbjct: 559 DTDDTCPICMEKIVDKEILTKCKHVFCKSCIKKALEYKQTCPVCN 603
>UNIPROTKB|F1P5G6 [details] [associations]
symbol:LONRF2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
OMA:KVMCEVL GeneTree:ENSGT00440000033329 EMBL:AADN02017710
EMBL:AADN02017711 EMBL:AADN02017712 IPI:IPI00585952
Ensembl:ENSGALT00000027073 Uniprot:F1P5G6
Length = 753
Score = 118 (46.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+D C +C L E T CGHTFC C+ +C++ CP C L + + L
Sbjct: 456 SDFECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPHCPLCKEKLSEFLASRTYKKTVL 515
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLML 115
EL+ ++ + + + + E NL+ DV + +
Sbjct: 516 TEELIVRYLPEELSERKKVYEEEMKELSNLN-KDVPIFV 553
>RGD|1559497 [details] [associations]
symbol:Trim65 "tripartite motif-containing 65" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 SMART:SM00184 RGD:1559497 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104271 CTD:201292 KO:K12031 OrthoDB:EOG4XD3R1
IPI:IPI00361535 RefSeq:NP_001129186.1 UniGene:Rn.29932
Ensembl:ENSRNOT00000046026 GeneID:303684 KEGG:rno:303684
OMA:CSHHERA NextBio:651886 Uniprot:D3ZY16
Length = 518
Score = 103 (41.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 19 DNDLL-CPICFELIREAHITRCGHTFCFSCIS---KCVELQIKCPKCSASLPDMNSVFPN 74
+ DL+ CPIC + CGHTFC +CI +C E +I CP+C P+ + N
Sbjct: 7 EEDLVTCPICLGRYCDPVTLPCGHTFCGNCIQDSWRCCE-KI-CPECRQPFPEGAKLSRN 64
Query: 75 FLLNELVQ 82
L+ L+Q
Sbjct: 65 VKLSTLLQ 72
Score = 34 (17.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 116 EVLNQRKHLLEAESSVAQY 134
+VL++R+ L + +++QY
Sbjct: 208 QVLHERQRLTDHLKALSQY 226
>UNIPROTKB|H0YH05 [details] [associations]
symbol:RNF10 "RING finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC063943 HGNC:HGNC:10055
ChiTaRS:RNF10 Ensembl:ENST00000541955 Uniprot:H0YH05
Length = 129
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ----IKCPKCSASL--PDMNSV 71
CPIC A ITRCGH FC++CI + L KCP C +S+ D+ SV
Sbjct: 18 CPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLKSV 71
>WB|WBGene00011365 [details] [associations]
symbol:T02C1.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:Z19156 eggNOG:COG5432
PIR:S28290 RefSeq:NP_499044.1 ProteinModelPortal:Q03605 SMR:Q03605
STRING:Q03605 EnsemblMetazoa:T02C1.1 GeneID:176305
KEGG:cel:CELE_T02C1.1 UCSC:T02C1.1 CTD:176305 WormBase:T02C1.1
HOGENOM:HOG000019179 InParanoid:Q03605 OMA:DEDFCCA NextBio:892010
Uniprot:Q03605
Length = 160
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSA 63
D D C +C + E I CGH++C CI + + KCP C A
Sbjct: 3 DEDFCCAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLCRA 47
>ZFIN|ZDB-GENE-070912-229 [details] [associations]
symbol:ftr07 "finTRIM family, member 7"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-229 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:BX572635 GeneTree:ENSGT00670000097622 IPI:IPI00482574
RefSeq:XP_698750.3 UniGene:Dr.152968 Ensembl:ENSDART00000022008
GeneID:570209 KEGG:dre:570209 CTD:570209 NextBio:20890028
Uniprot:F1R523
Length = 541
Score = 116 (45.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 25/84 (29%), Positives = 38/84 (45%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPNFLLN 78
C +C +L+++ CGH++C SCIS C + CP C + + N +L
Sbjct: 15 CSVCLDLLKDPVTIPCGHSYCMSCISDCWDQDEQNGVYSCPHCRQTFTPRPVLGKNTMLT 74
Query: 79 ELVQKHKIKSAQDSDGLRDFVASE 102
E+V+K K Q D D E
Sbjct: 75 EVVEKPKKTKLQAEDVECDICCGE 98
>UNIPROTKB|E1C626 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0002726 "positive
regulation of T cell cytokine production" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0009898 "internal side of plasma membrane" evidence=IEA]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA] [GO:0035631
"CD40 receptor complex" evidence=IEA] [GO:0042088 "T-helper 1 type
immune response" evidence=IEA] [GO:0042102 "positive regulation of
T cell proliferation" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043011 "myeloid dendritic
cell differentiation" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0045084 "positive regulation of interleukin-12 biosynthetic
process" evidence=IEA] [GO:0045410 "positive regulation of
interleukin-6 biosynthetic process" evidence=IEA] [GO:0045453 "bone
resorption" evidence=IEA] [GO:0045672 "positive regulation of
osteoclast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IEA]
[GO:0002218 "activation of innate immune response" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling
pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=TAS] [GO:0034146 "toll-like receptor 5 signaling
pathway" evidence=TAS] [GO:0034154 "toll-like receptor 7 signaling
pathway" evidence=TAS] [GO:0035419 "activation of MAPK activity
involved in innate immune response" evidence=TAS] [GO:0035681
"toll-like receptor 15 signaling pathway" evidence=TAS] [GO:0035682
"toll-like receptor 21 signaling pathway" evidence=TAS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 Pfam:PF13639 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 GO:GO:0005829 GO:GO:0048471 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0035419 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0042102 GO:GO:0004842 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0002755
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0007249
Reactome:REACT_102124 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0045672
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 Reactome:REACT_147795 GO:GO:0035681 GO:GO:0034146
GO:GO:2000679 GO:GO:0045084 GO:GO:0035682 GO:GO:0034154
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359
OMA:SEAPIRQ PANTHER:PTHR10131:SF48 EMBL:AADN02033086
IPI:IPI00571717 Ensembl:ENSGALT00000012888 Uniprot:E1C626
Length = 548
Score = 116 (45.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 29/74 (39%), Positives = 39/74 (52%)
Query: 14 QHSPP-DNDLLCPICFELIREAHITRCGHTFCFSCISK----CVELQIKCPKCSASLPDM 68
+ PP ++ CPIC +REA T CGH FC CI K C + KCP + L +
Sbjct: 59 EFDPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRRCRDAGHKCPVDNEILLE- 117
Query: 69 NSVFP-NFLLNELV 81
N +FP NF E++
Sbjct: 118 NQLFPDNFAKREIL 131
>POMBASE|SPCC548.05c [details] [associations]
symbol:SPCC548.05c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] [GO:0034080 "CENP-A containing nucleosome assembly at
centromere" evidence=ISO] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
PomBase:SPCC548.05c Prosite:PS00518 GO:GO:0005634 EMBL:CU329672
GO:GO:0044732 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006368 GO:GO:0004842 GO:GO:0034080
InterPro:IPR017907 OrthoDB:EOG4R53CF HSSP:Q9CQJ4 eggNOG:NOG260903
RefSeq:NP_587745.1 ProteinModelPortal:Q9P3U8
EnsemblFungi:SPCC548.05c.1 GeneID:2539314 KEGG:spo:SPCC548.05c
NextBio:20800479 Uniprot:Q9P3U8
Length = 468
Score = 115 (45.5 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 22 LLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLNELV 81
L CPIC E ++ T CGHT+C+ C+ ++ CP C L S P +L+ E++
Sbjct: 83 LECPICTEALQRPFTTHCGHTYCYECLLNWLKESKSCPTCRQKLYTQPS--PAYLVYEIM 140
>ZFIN|ZDB-GENE-060825-103 [details] [associations]
symbol:zgc:153151 "zgc:153151" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-060825-103
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR318603 IPI:IPI00920283
Ensembl:ENSDART00000131053 GeneTree:ENSGT00700000105241 Bgee:E7F6W7
Uniprot:E7F6W7
Length = 471
Score = 115 (45.5 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVE--LQIKCPKCSASLPDMNSVFPNFLLNELV 81
CP+C ++ + T CGH FC +C+ +C + +CP C + V N +L E+V
Sbjct: 42 CPVCLDVFTDPVTTPCGHNFCKTCLIQCWDNSQDYRCPLCKETFSKRPEVKSNTVLREIV 101
Query: 82 Q 82
Q
Sbjct: 102 Q 102
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPN 74
P +L C +C ++ T CGH +C +C+ KC + CP C + + + N
Sbjct: 118 PLSEELQCSVCLDVFNNPVTTPCGHNYCKTCLEKCWDYSHVCICPYCKETFSNRPDLKCN 177
Query: 75 FLLNELVQKHK 85
L E+VQ ++
Sbjct: 178 TALREIVQLYE 188
>MGI|MGI:1913847 [details] [associations]
symbol:Trim13 "tripartite motif-containing 13" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0004871 "signal transducer activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016239 "positive regulation of macroautophagy" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 MGI:MGI:1913847 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 EMBL:CH466535
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038
GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
CTD:10206 KO:K12003 GeneTree:ENSGT00690000101726
HOGENOM:HOG000290663 OMA:QPLNIFC eggNOG:NOG238872
HOVERGEN:HBG056536 OrthoDB:EOG46MBJP EMBL:AY033605 EMBL:AK013959
EMBL:AK017850 EMBL:BC138576 EMBL:BC145915 EMBL:AF220129
EMBL:AF302839 IPI:IPI00111312 RefSeq:NP_001157692.1
RefSeq:NP_075722.1 UniGene:Mm.23959 ProteinModelPortal:Q9CYB0
SMR:Q9CYB0 STRING:Q9CYB0 PhosphoSite:Q9CYB0 PRIDE:Q9CYB0
Ensembl:ENSMUST00000039562 Ensembl:ENSMUST00000165015 GeneID:66597
KEGG:mmu:66597 InParanoid:Q9CYB0 NextBio:322120 Bgee:Q9CYB0
CleanEx:MM_TRIM13 Genevestigator:Q9CYB0
GermOnline:ENSMUSG00000035235 Uniprot:Q9CYB0
Length = 407
Score = 114 (45.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 33/127 (25%), Positives = 54/127 (42%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI----------KCPKC--SASLP 66
+ DL CPIC L + + C H FC C+ +E + KCP C S
Sbjct: 5 EEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKETSAT 64
Query: 67 DMNSVFPNFLLNELVQKH-KIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQR-KHL 124
+NS+ N+ L +V+K+ KIK + + + + D+ L+ + R +H
Sbjct: 65 GVNSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCVTDMQLICGICATRGEHT 124
Query: 125 LEAESSV 131
SS+
Sbjct: 125 KHVFSSI 131
>UNIPROTKB|Q5D7I5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9493 "Callithrix pygmaea" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843512
ProteinModelPortal:Q5D7I5 SMR:Q5D7I5 Uniprot:Q5D7I5
Length = 494
Score = 115 (45.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCI------SKCVELQIKCPKCSASLPDMNSVFPN 74
++ CPIC EL+ E CGH+FC +CI S + + CP C S P N + PN
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRMSYPSEN-LRPN 70
Query: 75 FLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL 108
L +V++ K +G + D A + L L
Sbjct: 71 RHLANIVERLKEVMLSPEEGQKVDHCARHGEKLLL 105
>UNIPROTKB|C9JIU5 [details] [associations]
symbol:TRIM22 "E3 ubiquitin-protein ligase TRIM22"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC131574
HOGENOM:HOG000234134 HGNC:HGNC:16379 ChiTaRS:TRIM22 EMBL:AC109341
IPI:IPI00884241 ProteinModelPortal:C9JIU5 SMR:C9JIU5 STRING:C9JIU5
Ensembl:ENST00000414641 ArrayExpress:C9JIU5 Bgee:C9JIU5
Uniprot:C9JIU5
Length = 227
Score = 109 (43.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI-------KCPKCSASLPDMNSV 71
+ ++ CPIC EL+ E CGH+FC +CI+ ++ + CP C N +
Sbjct: 10 EKEVTCPICLELLTEPLSLDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQPGN-L 68
Query: 72 FPNFLLNELVQKHK-IKSAQDSDGLRDFVASESQNLSL 108
PN L +V++ K +K + RD + L +
Sbjct: 69 RPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGKKLQI 106
>UNIPROTKB|F1SN25 [details] [associations]
symbol:TRIM69 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003877
Pfam:PF00622 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104222
OMA:IAAHKEN EMBL:CU480607 Ensembl:ENSSSCT00000005168 Uniprot:F1SN25
Length = 500
Score = 115 (45.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPKCSASLPDMNSVFPNFLL 77
+L CP+C + R+ + CGH FC SCI + + K CP+C N F N +L
Sbjct: 38 ELHCPLCNDWFRDPLMLTCGHNFCQSCIENFWKQEAKETFCPECKMLCQYSNCTF-NLVL 96
Query: 78 NELVQKHK 85
+L++K K
Sbjct: 97 EKLIEKIK 104
>UNIPROTKB|E2RJU5 [details] [associations]
symbol:RAD18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045910 "negative regulation of DNA
recombination" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001741 "XY body" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0000403 "Y-form DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003034 InterPro:IPR006642
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00184
SMART:SM00513 SMART:SM00734 Pfam:PF00097 Prosite:PS00518
GO:GO:0005634 GO:GO:0009411 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0000785 GO:GO:0007283 Gene3D:1.10.720.30
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0001741 GO:GO:0005657 GO:GO:0000403 GO:GO:0045910 KO:K10627
CTD:56852 OMA:HSKYRKK GeneTree:ENSGT00390000011230
EMBL:AAEX03012082 EMBL:AAEX03012083 EMBL:AAEX03012084
RefSeq:XP_533750.2 ProteinModelPortal:E2RJU5
Ensembl:ENSCAFT00000008937 GeneID:476544 KEGG:cfa:476544
Uniprot:E2RJU5
Length = 503
Score = 115 (45.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 39/131 (29%), Positives = 67/131 (51%)
Query: 20 NDLL-CPICFELIREAH-ITRCGHTFCFSCISKCVELQIKCPKCSASL--PDMNSVFPNF 75
+DLL C ICF+ A I +C H +C CI K + + +CP C ++ PD+ + N
Sbjct: 20 DDLLRCGICFDYFNIAMMIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKN---NR 76
Query: 76 LLNELVQK------HKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAES 129
+L+ELV+ H ++ A +S + +S S+NL+ VN + +H L+ S
Sbjct: 77 ILDELVKSLNFARNHLLQFALESPPISP-ASSSSKNLAAK-VNTPVAF----RHSLKQGS 130
Query: 130 SVAQYKLLYEL 140
+ + L+ E+
Sbjct: 131 RLMENFLIREM 141
>ZFIN|ZDB-GENE-080219-13 [details] [associations]
symbol:trim35-39 "tripartite motif containing 35-39"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080219-13 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:BX005466 IPI:IPI00932638 Ensembl:ENSDART00000082154
OMA:ICEVISS Bgee:F1QQG3 Uniprot:F1QQG3
Length = 447
Score = 114 (45.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCISKCVELQI--KCPKC----SASLPDMNSVFPN 74
++ CPIC E+ + + C H+FC CI + +I +CP C S P N V N
Sbjct: 8 EISCPICCEIFKSPILLSCSHSFCKECIQQFWRTKISRECPVCRRRSSKDDPPSNLVLKN 67
Query: 75 FLLNELVQKHKIKSAQDSDGLRDFVASESQNLSL 108
L EL ++ + + S G +F ++ L L
Sbjct: 68 --LCELFERGRSHESCSSSGTEEFCGLHNERLKL 99
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 26/110 (23%), Positives = 53/110 (48%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNS--VFPNFL 76
+N+L C IC E EA C H+FC CI + + +++CP C + V N +
Sbjct: 6 ENELQCTICSEHFIEAVTLNCAHSFCSYCIDEWTKRKVECPICRQEIKSKTRSLVLDNCI 65
Query: 77 ------LNELVQKHKIKSAQDSDGLRDFV---ASESQNLSLPDVNLMLEV 117
L+ +++H++ ++ RD + A+++ + +P + +L +
Sbjct: 66 DRMVENLDVEMKEHRLTLIRERKEKRDMLVNPAADNDSSIIPSIYSILSI 115
>ZFIN|ZDB-GENE-070912-323 [details] [associations]
symbol:ftr25 "finTRIM family, member 25"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-323 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 EMBL:BX548047 IPI:IPI00507459
Ensembl:ENSDART00000098047 Uniprot:F1Q5U7
Length = 553
Score = 115 (45.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKC----VELQI-KCPKCSASLPDMNSVFPN 74
N C +C L++E CGH++C +CI+ C + ++ CP+C + ++ N
Sbjct: 11 NQFSCSVCLGLLKEPVTIPCGHSYCMNCITDCWNQDEQRRVYSCPQCRQTFTPRPALNKN 70
Query: 75 FLLNELVQKHKIKSAQDSD 93
+ E+V+K K+ Q+ D
Sbjct: 71 VVFAEIVEKLKMTRVQNVD 89
>ZFIN|ZDB-GENE-070912-486 [details] [associations]
symbol:ftr37 "finTRIM family, member 37"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-486 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 EMBL:BX323812 EMBL:BX537288
IPI:IPI00864809 Ensembl:ENSDART00000100987 Bgee:E9QDQ1
Uniprot:E9QDQ1
Length = 557
Score = 115 (45.5 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ-----IKCPKCSASLPDMNSVFPN 74
++ C +C +L+++ T CGH +C SCI+ C + CP+C + ++ N
Sbjct: 11 HEFSCAVCLDLLKDPVSTACGHNYCMSCITNCWNQEDQKRVYSCPQCRQTFSPRPALAKN 70
Query: 75 FLLNELV---QKHKIKSA 89
+L E++ QK K+++A
Sbjct: 71 TMLAEVLEKLQKSKLQAA 88
>MGI|MGI:2664992 [details] [associations]
symbol:Trim50 "tripartite motif-containing 50" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016235 "aggresome" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070201 "regulation of establishment of protein localization"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:2664992
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 GeneTree:ENSGT00680000099496 CTD:135892
eggNOG:NOG245385 HOVERGEN:HBG106596 KO:K12024 EMBL:AY081947
IPI:IPI00408393 RefSeq:NP_839971.1 UniGene:Mm.261834
ProteinModelPortal:Q810I2 SMR:Q810I2 STRING:Q810I2
PhosphoSite:Q810I2 PRIDE:Q810I2 Ensembl:ENSMUST00000065785
GeneID:215061 KEGG:mmu:215061 UCSC:uc008zyf.1 NextBio:374596
CleanEx:MM_TRIM50 Genevestigator:Q810I2 Uniprot:Q810I2
Length = 483
Score = 114 (45.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCI---SKCVELQIKCPKCSASLPDMNSVFPNFL 76
+ L CPIC E+ +E + +CGH++C C+ S+ ++ ++ CP C S+ D +S PN
Sbjct: 12 DQLQCPICLEVFKEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSV-DCSSSPPNVS 70
Query: 77 LNELV 81
L ++
Sbjct: 71 LARVI 75
>SGD|S000000662 [details] [associations]
symbol:RAD18 "E3 ubiquitin ligase" species:4932
"Saccharomyces cerevisiae" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IPI] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=IDA] [GO:0006513 "protein
monoubiquitination" evidence=IMP] [GO:0042275 "error-free
postreplication DNA repair" evidence=IGI] [GO:0042276 "error-prone
translesion synthesis" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070987
"error-free translesion synthesis" evidence=IGI] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003034 InterPro:IPR004580
Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800 SMART:SM00184
SMART:SM00513 UniPathway:UPA00143 SGD:S000000662 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0003684 GO:GO:0008270
EMBL:X59720 EMBL:BK006937 GO:GO:0000790 GO:GO:0003697
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0006513 GO:GO:0070987 GO:GO:0042276
eggNOG:COG5432 KO:K10627 TIGRFAMs:TIGR00599 OMA:YICKEFF
OrthoDB:EOG4F4WMB GeneTree:ENSGT00390000011230 EMBL:X12542
EMBL:M36405 EMBL:X12588 PIR:S05802 RefSeq:NP_009992.1
ProteinModelPortal:P10862 SMR:P10862 DIP:DIP-1172N IntAct:P10862
MINT:MINT-394603 STRING:P10862 PaxDb:P10862 EnsemblFungi:YCR066W
GeneID:850430 KEGG:sce:YCR066W CYGD:YCR066w HOGENOM:HOG000248313
NextBio:966012 Genevestigator:P10862 GermOnline:YCR066W
GO:GO:0042275 Uniprot:P10862
Length = 487
Score = 114 (45.2 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLLN 78
D L C IC + ++ +T CGHTFC CI + Q CP C + + + FL++
Sbjct: 23 DTLLRCHICKDFLKVPVLTPCGHTFCSLCIRTHLNNQPNCPLCLFEFRE-SLLRSEFLVS 81
Query: 79 ELVQKHKIKSAQDSDGLR---DFVASESQNLSLPDVNLMLEVLNQ 120
E++Q + + D LR E++ + P+ + +E++++
Sbjct: 82 EIIQSYTSLRSSLLDALRIPKPTPVPENEEVPGPENSSWIELISE 126
>ZFIN|ZDB-GENE-030616-180 [details] [associations]
symbol:si:busm1-163l24.4 "si:busm1-163l24.4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-030616-180 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:AL591669 IPI:IPI00501631 RefSeq:NP_001005315.1
UniGene:Dr.114263 ProteinModelPortal:Q8AW62 STRING:Q8AW62
GeneID:368754 KEGG:dre:368754 InParanoid:Q8AW62 NextBio:20813157
Uniprot:Q8AW62
Length = 278
Score = 110 (43.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 31/111 (27%), Positives = 51/111 (45%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ------IKCPKCSASLPDMNSVFPNFLL 77
CPIC + +++ CGH +C SCI E CP+C + ++ N +
Sbjct: 14 CPICLDALKDPVTIPCGHNYCMSCIKHYWEKNGSRDTGYTCPECRKTFSPRPALNKNTMF 73
Query: 78 NELVQKHKIKSAQDSDGLRDF--VASESQNLSL--PDVNLMLEVLNQRKHL 124
E+V++ K QD+ R V +E QN + P + +L ++ R HL
Sbjct: 74 AEVVERFKNTGLQDTSPARYMTPVHTERQNCTSQNPKDSRILPEMD-RTHL 123
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 115 (45.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 37/110 (33%), Positives = 58/110 (52%)
Query: 3 ATSTPSRSLKRQHSP--PDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK-CP 59
A +T S S+K + SP PD + CPI EL+++ I G T+ SCI K ++ K CP
Sbjct: 213 ALTTRSASIKHR-SPIIPD-EFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCP 270
Query: 60 KCSASLPDMNSVFPNFLLNELVQK----HKIKSAQDSDGLRDFVASESQN 105
K L S+ PNF+L L+ + + I+ ++ RD A++S +
Sbjct: 271 KTQQPLSH-TSLTPNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSD 319
>FB|FBgn0003330 [details] [associations]
symbol:Sce "Sex combs extra" species:7227 "Drosophila
melanogaster" [GO:0045498 "sex comb development" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0008278 "cohesin complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030713 "ovarian follicle cell stalk
formation" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=TAS] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IMP] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:AE014297
GO:GO:0007126 GO:GO:0005730 GO:GO:0022008 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 InterPro:IPR017907 GO:GO:0030713
GO:GO:0045498 GO:GO:0035518 GO:GO:0035102 GO:GO:0030708
GO:GO:0008278 GO:GO:0007062 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 KO:K10695 EMBL:AJ001514 EMBL:AY058535
RefSeq:NP_477509.1 UniGene:Dm.4170 ProteinModelPortal:Q9VB08
SMR:Q9VB08 DIP:DIP-21764N IntAct:Q9VB08 MINT:MINT-860974
STRING:Q9VB08 PaxDb:Q9VB08 PRIDE:Q9VB08 EnsemblMetazoa:FBtr0085245
GeneID:43327 KEGG:dme:Dmel_CG5595 CTD:43327 FlyBase:FBgn0003330
InParanoid:Q9VB08 OMA:MELYFAP OrthoDB:EOG489332 PhylomeDB:Q9VB08
GenomeRNAi:43327 NextBio:833362 Bgee:Q9VB08 GermOnline:CG5595
Uniprot:Q9VB08
Length = 435
Score = 113 (44.8 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 20 NDLLCPICFELIREAHITR-CGHTFCFSCISKCVELQIK-CPKCSASLPDMNSVF--PNF 75
++L+CPIC +++++ T+ C H FC CI + K CP C L S+ PNF
Sbjct: 42 SELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNF 101
Query: 76 --LLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRK 122
L++++ + A + F ++SQ + +N +++ +Q +
Sbjct: 102 DLLISKIYPSREEYEAIQEKVMAKFNQTQSQQALVNSINEGIKLQSQNR 150
>ZFIN|ZDB-GENE-040718-482 [details] [associations]
symbol:zgc:92594 "zgc:92594" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-040718-482 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:FP236812 GeneTree:ENSGT00690000102221
IPI:IPI00993075 Ensembl:ENSDART00000128137 ArrayExpress:F1R3Q1
Bgee:F1R3Q1 Uniprot:F1R3Q1
Length = 437
Score = 113 (44.8 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCI----SKCVELQIKCPKC 61
+ +L CP+C +L R+ H+ CGH FC C+ + +++CP+C
Sbjct: 12 EEELTCPVCLDLYRDPHLLPCGHNFCLQCLRRLKGRSERGRLRCPEC 58
>ZFIN|ZDB-GENE-041001-120 [details] [associations]
symbol:ftr78 "finTRIM family, member 78"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-041001-120 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:BX248515 GeneTree:ENSGT00670000097622 IPI:IPI00861910
Ensembl:ENSDART00000103261 Uniprot:F1QPS0
Length = 618
Score = 115 (45.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 19 DNDLL-CPICFELIREAHITRCGHTFCFSCISKC----VELQIKCPKCSASLPDMNSVFP 73
D+D C +C +L+R+ CGH++C SCI++C + KCP+C + +
Sbjct: 7 DHDQYSCSVCLDLLRDPVTIPCGHSYCMSCINECWNKDQKAPYKCPQCRHTFSSKPPLNR 66
Query: 74 NFLLNELVQKHKIKSAQDS 92
+ +L EL++K + + + S
Sbjct: 67 STVLAELMEKLRAQESPQS 85
>ASPGD|ASPL0000000141 [details] [associations]
symbol:AN5961 species:162425 "Emericella nidulans"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 EMBL:BN001301 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AACD01000101 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802 OrthoDB:EOG437VPJ
RefSeq:XP_663565.1 ProteinModelPortal:Q5B0G9
EnsemblFungi:CADANIAT00007064 GeneID:2870893 KEGG:ani:AN5961.2
HOGENOM:HOG000163327 OMA:DCQVCYS Uniprot:Q5B0G9
Length = 623
Score = 115 (45.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 1 MSATSTP-SRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP 59
+SA T +R+L + + N+L C +C+ LI + T CGHTFC C++ + CP
Sbjct: 180 LSACYTKYTRTLTKLRATVRNELDCQVCYSLILDPLTTPCGHTFCRRCVAMALSHSNLCP 239
Query: 60 KCSASLPDMNSV 71
C L +SV
Sbjct: 240 ICRRKLNMPSSV 251
>ZFIN|ZDB-GENE-081030-23 [details] [associations]
symbol:trim35-34 "tripartite motif containing 35-34"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-23 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726 OrthoDB:EOG4QNMW8
GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887 EMBL:CU539057
IPI:IPI00900847 RefSeq:NP_001137520.1 UniGene:Dr.154012
Ensembl:ENSDART00000036283 GeneID:566050 KEGG:dre:566050
OMA:WALARIT NextBio:20887999 Uniprot:B8JLS7
Length = 452
Score = 113 (44.8 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKC--VELQIKCPKC----SASLPDMN 69
S +D CP+C ++ + I CGH+FC C+ +C E +CP C S + P +N
Sbjct: 3 SSAKDDYTCPVCQDIFKTPVILSCGHSFCQECLQQCWRSENTQECPVCRTRSSIADPPVN 62
Query: 70 SVFPNFLLNELVQKHKIKSAQDSD 93
N + L +++K S++ +
Sbjct: 63 LALQNLCESHLKKRNKRHSSRSEE 86
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCIS------KCVELQIKCPKCSASLPDMNSVFPN 74
++ CPIC EL++E T C H+FC +CI+ + E + CP C N + PN
Sbjct: 12 EVTCPICLELLKEPVSTDCNHSFCRACITINYESNRNTEGEGSCPVCRVCYLFRN-LRPN 70
Query: 75 FLLNELVQKHK-IKSAQDSDGLRDFVASESQNLSL 108
+ +V++ K KS + + + A + L L
Sbjct: 71 RHVANIVERLKGFKSIPEEEQKVNVCAQHGEKLQL 105
>ZFIN|ZDB-GENE-090508-4 [details] [associations]
symbol:ftr59 "finTRIM family, member 59" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-090508-4 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:BX005466 IPI:IPI00487750 RefSeq:XP_686796.2
ProteinModelPortal:F8W341 Ensembl:ENSDART00000148970 GeneID:558486
KEGG:dre:558486 NextBio:20882494 Uniprot:F8W341
Length = 540
Score = 114 (45.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCV----ELQI-KCPKCSASLPDMNSVFPN 74
++ +C +C +L+++ CGH++C SCI+ C E ++ CP+C + ++ N
Sbjct: 9 DEFMCLVCLDLLKDPVTIPCGHSYCKSCITGCWDQDDEKRVHSCPQCRETFSPRPALAKN 68
Query: 75 FLLNELVQK-HKIKSAQD 91
+L E+V+K K K + D
Sbjct: 69 TILAEIVEKLKKTKPSAD 86
>MGI|MGI:2444898 [details] [associations]
symbol:Chfr "checkpoint with forkhead and ring finger
domains" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007093 "mitotic cell cycle
checkpoint" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0016605 "PML body" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019941 "modification-dependent protein catabolic
process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 MGI:MGI:2444898
Prosite:PS00518 GO:GO:0051301 GO:GO:0007067 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 EMBL:CH466529
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0007093 InterPro:IPR017907 CTD:55743 eggNOG:NOG253207
GeneTree:ENSGT00400000022306 KO:K10644 OMA:LYWGCAR
HOVERGEN:HBG048005 ChiTaRS:CHFR EMBL:AK052473 EMBL:AK077629
EMBL:AK147892 EMBL:AK154038 EMBL:AK155295 EMBL:AK155525
EMBL:AK169182 EMBL:AK169193 EMBL:BC049792 IPI:IPI00336194
IPI:IPI00400444 IPI:IPI00653343 IPI:IPI00944802 RefSeq:NP_766305.2
UniGene:Mm.30264 ProteinModelPortal:Q810L3 SMR:Q810L3 STRING:Q810L3
PhosphoSite:Q810L3 PRIDE:Q810L3 Ensembl:ENSMUST00000014812
Ensembl:ENSMUST00000112519 GeneID:231600 KEGG:mmu:231600
UCSC:uc008ypv.2 UCSC:uc008ypw.2 UCSC:uc008ypx.2 UCSC:uc008ypz.2
InParanoid:Q3TFD8 NextBio:380643 Bgee:Q810L3 CleanEx:MM_CHFR
Genevestigator:Q810L3 GermOnline:ENSMUSG00000014668 Uniprot:Q810L3
Length = 664
Score = 115 (45.5 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 32/110 (29%), Positives = 50/110 (45%)
Query: 6 TPSRSLKRQHSPPDN---DLLCPICFELIREA-HITRCGHTFCFSCISKCVELQIKCPKC 61
T S +K PD L C IC +L+ + + C HTFC +C S +E CP C
Sbjct: 282 TSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTC 341
Query: 62 SASLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDV 111
P + + N +LN LV+ + I+ S D + +++N D+
Sbjct: 342 RC--P-VERICKNHILNNLVEAYLIQHPDKSRSEEDVRSMDARNKITQDM 388
>UNIPROTKB|F5GWT6 [details] [associations]
symbol:CHFR "E3 ubiquitin-protein ligase CHFR" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC127070 HGNC:HGNC:20455 ChiTaRS:CHFR
IPI:IPI00973335 ProteinModelPortal:F5GWT6 SMR:F5GWT6 PRIDE:F5GWT6
Ensembl:ENST00000541837 ArrayExpress:F5GWT6 Bgee:F5GWT6
Uniprot:F5GWT6
Length = 349
Score = 111 (44.1 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 19 DNDLLCPICFELIREA-HITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVFPNFLL 77
+ L C IC +L+ + + C HTFC +C S +E CP C P + + N +L
Sbjct: 99 EETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRC--P-VERICKNHIL 155
Query: 78 NELVQKHKIKSAQDSDGLRDFVASESQNLSLPDV 111
N LV+ + I+ S D + +++N D+
Sbjct: 156 NNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDM 189
>UNIPROTKB|Q32L60 [details] [associations]
symbol:TRIM13 "E3 ubiquitin-protein ligase TRIM13"
species:9913 "Bos taurus" [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0097038 "perinuclear endoplasmic
reticulum" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0010332 GO:GO:0004871
GO:GO:0010942 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433
GO:GO:0097038 GO:GO:0004842 InterPro:IPR017907 GO:GO:0051865
GO:GO:0016239 CTD:10206 KO:K12003 EMBL:DAAA02032918 EMBL:BC109749
IPI:IPI00690395 RefSeq:NP_001033254.1 UniGene:Bt.5644
ProteinModelPortal:Q32L60 Ensembl:ENSBTAT00000010745 GeneID:535190
KEGG:bta:535190 GeneTree:ENSGT00690000101726 HOGENOM:HOG000290663
OMA:QPLNIFC NextBio:20876654 Uniprot:Q32L60
Length = 407
Score = 112 (44.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI----------KCPKC--SASLP 66
+ DL CPIC L + + C H FC C+ +E + KCP C S
Sbjct: 5 EEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGNVRNSLWRSSPFKCPTCRKETSAT 64
Query: 67 DMNSVFPNFLLNELVQKH-KIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQR 121
+NS+ N+ L +V+K+ KIK + + + L D+ L+ + R
Sbjct: 65 GVNSLQVNYSLKGIVEKYNKIKVSPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120
>UNIPROTKB|O60858 [details] [associations]
symbol:TRIM13 "E3 ubiquitin-protein ligase TRIM13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016239 "positive regulation of macroautophagy" evidence=IDA]
[GO:0097038 "perinuclear endoplasmic reticulum" evidence=IDA]
[GO:0010332 "response to gamma radiation" evidence=IEP] [GO:0010942
"positive regulation of cell death" evidence=IDA] [GO:0009653
"anatomical structure morphogenesis" evidence=TAS] [GO:0007165
"signal transduction" evidence=IMP] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 GO:GO:0005789 GO:GO:0046872
EMBL:CH471075 GO:GO:0043123 GO:GO:0008270 GO:GO:0010332
GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0097038 GO:GO:0004842 GO:GO:0009653
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239 EMBL:AL137060
UniGene:Hs.436922 DNASU:10206 KEGG:hsa:10206 CTD:10206 KO:K12003
NextBio:38634 OMA:QPLNIFC EMBL:AJ224819 EMBL:AF279660 EMBL:AF220127
EMBL:AF220128 EMBL:AY191002 EMBL:AF241849 EMBL:AF241850
EMBL:AY455758 EMBL:AY764035 EMBL:AK314496 EMBL:BC003579
EMBL:BC063407 IPI:IPI00477161 IPI:IPI00607858 IPI:IPI00944555
RefSeq:NP_001007279.1 RefSeq:NP_005789.2 RefSeq:NP_434698.1
RefSeq:NP_998755.1 ProteinModelPortal:O60858 SMR:O60858
STRING:O60858 PhosphoSite:O60858 PaxDb:O60858 PRIDE:O60858
Ensembl:ENST00000298772 Ensembl:ENST00000356017
Ensembl:ENST00000378182 Ensembl:ENST00000378183
Ensembl:ENST00000420995 Ensembl:ENST00000442421
Ensembl:ENST00000457662 GeneID:10206 UCSC:uc001vdp.1
UCSC:uc001vdq.1 GeneCards:GC13P050570 HGNC:HGNC:9976 HPA:HPA000367
MIM:605661 neXtProt:NX_O60858 PharmGKB:PA162406947 eggNOG:NOG238872
HOVERGEN:HBG056536 InParanoid:O60858 OrthoDB:EOG46MBJP
PhylomeDB:O60858 GenomeRNAi:10206 Bgee:O60858 CleanEx:HS_TRIM13
Genevestigator:O60858 GermOnline:ENSG00000204977 Uniprot:O60858
Length = 407
Score = 112 (44.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI----------KCPKC--SASLP 66
+ DL CPIC L + + C H FC C+ +E + KCP C S
Sbjct: 5 EEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETSAT 64
Query: 67 DMNSVFPNFLLNELVQKH-KIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQR 121
+NS+ N+ L +V+K+ KIK + + + L D+ L+ + R
Sbjct: 65 GINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120
>UNIPROTKB|F1RK25 [details] [associations]
symbol:TRIM13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239 CTD:10206 KO:K12003
GeneTree:ENSGT00690000101726 OMA:QPLNIFC EMBL:GACC01000004
RefSeq:XP_003131013.1 Ensembl:ENSSSCT00000010288 GeneID:100153839
KEGG:ssc:100153839 Uniprot:F1RK25
Length = 407
Score = 112 (44.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI----------KCPKC--SASLP 66
+ DL CPIC L + + C H FC C+ +E + KCP C S
Sbjct: 5 EEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRSSPFKCPTCRKETSAT 64
Query: 67 DMNSVFPNFLLNELVQKH-KIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQR 121
+NS+ N+ L +V+K+ KIK + + + L D+ L+ + R
Sbjct: 65 GVNSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 120
>RGD|1308035 [details] [associations]
symbol:Rnf8 "ring finger protein 8, E3 ubiquitin protein ligase"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=ISO;ISS] [GO:0000781 "chromosome, telomeric
region" evidence=ISO;ISS] [GO:0003682 "chromatin binding"
evidence=ISO;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0006302 "double-strand break repair" evidence=ISO;ISS]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO;ISS] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=ISO;ISS]
[GO:0008270 "zinc ion binding" evidence=ISO;ISS] [GO:0010212
"response to ionizing radiation" evidence=ISO;ISS] [GO:0030496
"midbody" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0033522 "histone H2A ubiquitination"
evidence=ISO;ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0042393 "histone binding" evidence=ISO;ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISO;ISS]
[GO:0043486 "histone exchange" evidence=ISO;ISS] [GO:0045190
"isotype switching" evidence=ISO;ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISO;ISS] [GO:0045900 "negative
regulation of translational elongation" evidence=ISO;ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA;ISO] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISO;ISS] [GO:0070535 "histone
H2A K63-linked ubiquitination" evidence=ISO;ISS] [GO:0070936
"protein K48-linked ubiquitination" evidence=ISO;ISS]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006
PROSITE:PS50089 SMART:SM00184 SMART:SM00240 UniPathway:UPA00143
RGD:1308035 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0051301 GO:GO:0007067 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043486 GO:GO:0045190 GO:GO:0004842 GO:GO:0030496
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HSSP:O76064
HOVERGEN:HBG023954 KO:K10667 CTD:9025 HOGENOM:HOG000154169
PANTHER:PTHR15067:SF3 EMBL:BC099079 IPI:IPI00372827
RefSeq:NP_001020898.1 UniGene:Rn.12463 ProteinModelPortal:Q4KLN8
SMR:Q4KLN8 PRIDE:Q4KLN8 Ensembl:ENSRNOT00000065629 GeneID:361815
KEGG:rno:361815 UCSC:RGD:1308035 NextBio:677706 ArrayExpress:Q4KLN8
Genevestigator:Q4KLN8 Uniprot:Q4KLN8
Length = 487
Score = 113 (44.8 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM-NSVFPNFLL 77
+N+L C IC E EA C H+FC CIS+ ++ +++CP C + NS+ + +
Sbjct: 400 ENELQCIICSEYFIEAVTLNCAHSFCSFCISEWMKRKVECPICRKDIESRTNSLVLDNCI 459
Query: 78 NELVQK 83
+++V++
Sbjct: 460 SKMVER 465
>FB|FBgn0030693 [details] [associations]
symbol:CG8974 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:COG5574 KO:K10666
GeneTree:ENSGT00390000014107 OrthoDB:EOG4QBZN7 EMBL:AY060297
RefSeq:NP_573076.1 RefSeq:NP_727896.1 RefSeq:NP_727897.1
RefSeq:NP_996448.1 RefSeq:NP_996449.1 UniGene:Dm.7984 SMR:Q9VXP1
STRING:Q9VXP1 EnsemblMetazoa:FBtr0074185 EnsemblMetazoa:FBtr0074186
EnsemblMetazoa:FBtr0074187 EnsemblMetazoa:FBtr0074188
EnsemblMetazoa:FBtr0074189 GeneID:32532 KEGG:dme:Dmel_CG8974
UCSC:CG8974-RA FlyBase:FBgn0030693 InParanoid:Q9VXP1 OMA:ENNDETS
GenomeRNAi:32532 NextBio:778955 Uniprot:Q9VXP1
Length = 277
Score = 109 (43.4 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 4 TSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPK 60
T + +++H+ D+ C IC + ++A ++ CGH FC+ C+ + + + CP
Sbjct: 105 TKANEKDKEKEHTADDSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPV 164
Query: 61 CSASLPDMNSVFPNFLLNELVQK 83
C A++ D + V P + N Q+
Sbjct: 165 CKAAV-DKDKVIPLYGRNSTHQE 186
>UNIPROTKB|Q5D7J2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9555 "Papio anubis" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 CTD:85363 EMBL:AY843505
RefSeq:NP_001106102.1 UniGene:Pan.11156 ProteinModelPortal:Q5D7J2
SMR:Q5D7J2 GeneID:100126714 Uniprot:Q5D7J2
Length = 497
Score = 113 (44.8 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCIS----KCV---ELQIKCPKCSASLPDMNSVFP 73
++ CPIC EL+ E CGH+FC +CI+ K + E + CP C S N + P
Sbjct: 12 EVTCPICLELLTEPLSLPCGHSFCQACITANHRKSMLYKEGERSCPVCRISYQPEN-IQP 70
Query: 74 NFLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL 108
N + +V+K + +GL+ D A + L L
Sbjct: 71 NRHVANIVEKLREVKLSPEEGLKVDHCARHGEKLLL 106
>UNIPROTKB|E2QS10 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 KO:K10666 GeneTree:ENSGT00390000014107
CTD:6048 OMA:FQSFGDT EMBL:AAEX03008226 RefSeq:XP_532092.1
Ensembl:ENSCAFT00000001208 GeneID:474858 KEGG:cfa:474858
NextBio:20850802 Uniprot:E2QS10
Length = 180
Score = 104 (41.7 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPKCSASLPDMNSVFPNFLL-NE 79
C IC E REA ++ CGH +C+ C+ + +E + + CP C A + V P + ++
Sbjct: 27 CNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGI-SREKVVPLYGRGSQ 85
Query: 80 LVQKHKIKSAQDSDGLRDFVASESQ 104
Q ++K+ G R ASES+
Sbjct: 86 KPQDPRLKTPPRPQGQRP--ASESR 108
>FB|FBgn0037384 [details] [associations]
symbol:dgrn "degringolade" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032183 "SUMO binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0033768 "SUMO-targeted ubiquitin ligase
complex" evidence=IC] [GO:0070201 "regulation of establishment of
protein localization" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043393 "regulation of protein binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007530 "sex
determination" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IGI]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014297 GO:GO:0005737 GO:GO:0045893
GO:GO:0022008 GO:GO:0046872 GO:GO:0008270 GO:GO:0043393
GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 HSSP:P38398 GO:GO:0007530 GO:GO:0070201
GO:GO:0033768 GeneTree:ENSGT00390000010318 UniGene:Dm.1077
GeneID:40725 KEGG:dme:Dmel_CG10981 CTD:40725 FlyBase:FBgn0037384
GenomeRNAi:40725 NextBio:820277 EMBL:AY060824 RefSeq:NP_649596.1
SMR:Q9VNJ0 IntAct:Q9VNJ0 MINT:MINT-766055 STRING:Q9VNJ0
EnsemblMetazoa:FBtr0078638 UCSC:CG10981-RA InParanoid:Q9VNJ0
OMA:IRATHKC Uniprot:Q9VNJ0
Length = 319
Score = 110 (43.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 5 STPSRSLKRQHSPPDNDLL--CPICFELI--REAHITRCGHTFCFSCISKCVELQIKCPK 60
++P + + R + L CPIC + + RE T+CGH FC CI + KCP
Sbjct: 245 ASPPKRVNRDIDESQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATHKCPI 304
Query: 61 CSASL 65
C+ L
Sbjct: 305 CNKKL 309
>MGI|MGI:1890476 [details] [associations]
symbol:Rad18 "RAD18 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000785 "chromatin" evidence=IDA] [GO:0001741 "XY body"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005657 "replication fork" evidence=ISO] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009411 "response
to UV" evidence=IMP] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0045910
"negative regulation of DNA recombination" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003034 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
UniPathway:UPA00143 MGI:MGI:1890476 Prosite:PS00518 GO:GO:0005634
GO:GO:0009411 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0007283
GO:GO:0006974 GO:GO:0016567 Gene3D:1.10.720.30 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031593 InterPro:IPR017907 GO:GO:0001741
GO:GO:0045910 eggNOG:COG5432 KO:K10627 CTD:56852
HOGENOM:HOG000234845 HOVERGEN:HBG054721 EMBL:AF205278 EMBL:AK012795
IPI:IPI00470179 RefSeq:NP_067360.2 UniGene:Mm.103812
ProteinModelPortal:Q9QXK2 SMR:Q9QXK2 STRING:Q9QXK2
PhosphoSite:Q9QXK2 PRIDE:Q9QXK2 Ensembl:ENSMUST00000077088
GeneID:58186 KEGG:mmu:58186 UCSC:uc009dec.2
GeneTree:ENSGT00390000011230 NextBio:314151 Bgee:Q9QXK2
CleanEx:MM_RAD18 Genevestigator:Q9QXK2
GermOnline:ENSMUSG00000030254 Uniprot:Q9QXK2
Length = 509
Score = 113 (44.8 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 20 NDLL-CPICFELIREAHIT-RCGHTFCFSCISKCVELQIKCPKCSASL--PDMNSVFPNF 75
+DLL C ICFE A I +C H +C CI K + + +CP C ++ PD+ + N
Sbjct: 20 DDLLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYKTQCPTCCVAVTEPDLRN---NR 76
Query: 76 LLNELVQ 82
LL+ELV+
Sbjct: 77 LLDELVK 83
>FB|FBgn0052581 [details] [associations]
symbol:CG32581 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:COG5574 KO:K10666
GeneTree:ENSGT00390000014107 EMBL:BT082041 RefSeq:NP_001096988.2
RefSeq:NP_727898.2 UniGene:Dm.33538 SMR:Q8IR26 IntAct:Q8IR26
MINT:MINT-741955 STRING:Q8IR26 EnsemblMetazoa:FBtr0074184
EnsemblMetazoa:FBtr0113439 GeneID:318098 KEGG:dme:Dmel_CG32581
UCSC:CG32581-RA FlyBase:FBgn0052581 InParanoid:Q8IR26
OrthoDB:EOG4QBZN7 GenomeRNAi:318098 NextBio:844797 Uniprot:Q8IR26
Length = 283
Score = 109 (43.4 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 22/83 (26%), Positives = 43/83 (51%)
Query: 4 TSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CPK 60
T + +++H+ D+ C IC + ++A ++ CGH FC+ C+ + + + CP
Sbjct: 105 TKANEKDKEKEHTADDSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPV 164
Query: 61 CSASLPDMNSVFPNFLLNELVQK 83
C A++ D + V P + N Q+
Sbjct: 165 CKAAV-DKDKVIPLYGRNSTHQE 186
>RGD|1303139 [details] [associations]
symbol:Rnf114 "ring finger protein 114" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA;ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 RGD:1303139 Prosite:PS00518
Pfam:PF05605 GO:GO:0007275 GO:GO:0030154 GO:GO:0046872
GO:GO:0008270 GO:GO:0007283 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR008598 CTD:55905
eggNOG:NOG145063 GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OrthoDB:EOG4CVG7Q EMBL:AY603473
EMBL:BC098633 IPI:IPI00421945 RefSeq:NP_001001517.1
UniGene:Rn.49925 ProteinModelPortal:Q6J2U6 PRIDE:Q6J2U6
Ensembl:ENSRNOT00000012675 GeneID:362277 KEGG:rno:362277
UCSC:RGD:1303139 InParanoid:Q6J2U6 NextBio:679307
ArrayExpress:Q6J2U6 Genevestigator:Q6J2U6
GermOnline:ENSRNOG00000009525 Uniprot:Q6J2U6
Length = 229
Score = 107 (42.7 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 1 MSATSTPSRSLKRQHSPP--DNDLL----CPICFELIREAHITRCGHTFCFSCISKCVEL 54
M+A SR Q + P + D L CP+C E+ + CGH FC +C+ +C L
Sbjct: 1 MAAAQPESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQEC--L 58
Query: 55 QIKCPKCSASLPDMNSVFPNFLLNELVQKHKIKSAQDS-DGLR-DFVASE 102
+ K P C +++ P EL + +I+S + S G R DFV S+
Sbjct: 59 KPKKPVCGVC---RSALAPGVRAAEL--ERQIESIETSCHGCRKDFVLSK 103
>UNIPROTKB|Q6J2U6 [details] [associations]
symbol:Rnf114 "RING finger protein 114" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 RGD:1303139 Prosite:PS00518 Pfam:PF05605
GO:GO:0007275 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OrthoDB:EOG4CVG7Q EMBL:AY603473
EMBL:BC098633 IPI:IPI00421945 RefSeq:NP_001001517.1
UniGene:Rn.49925 ProteinModelPortal:Q6J2U6 PRIDE:Q6J2U6
Ensembl:ENSRNOT00000012675 GeneID:362277 KEGG:rno:362277
UCSC:RGD:1303139 InParanoid:Q6J2U6 NextBio:679307
ArrayExpress:Q6J2U6 Genevestigator:Q6J2U6
GermOnline:ENSRNOG00000009525 Uniprot:Q6J2U6
Length = 229
Score = 107 (42.7 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 1 MSATSTPSRSLKRQHSPP--DNDLL----CPICFELIREAHITRCGHTFCFSCISKCVEL 54
M+A SR Q + P + D L CP+C E+ + CGH FC +C+ +C L
Sbjct: 1 MAAAQPESRDGAAQSAKPASETDPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQEC--L 58
Query: 55 QIKCPKCSASLPDMNSVFPNFLLNELVQKHKIKSAQDS-DGLR-DFVASE 102
+ K P C +++ P EL + +I+S + S G R DFV S+
Sbjct: 59 KPKKPVCGVC---RSALAPGVRAAEL--ERQIESIETSCHGCRKDFVLSK 103
>MGI|MGI:2684988 [details] [associations]
symbol:Pex10 "peroxisomal biogenesis factor 10"
species:10090 "Mus musculus" [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005779
"integral to peroxisomal membrane" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
MGI:MGI:2684988 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
EMBL:CH466594 InterPro:IPR017907 EMBL:AL670413 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
HOGENOM:HOG000180194 HOVERGEN:HBG053568 EMBL:BC147304 EMBL:BC147305
IPI:IPI00676835 RefSeq:NP_001035866.1 UniGene:Mm.133114
ProteinModelPortal:B1AUE5 SMR:B1AUE5 STRING:B1AUE5 PaxDb:B1AUE5
PRIDE:B1AUE5 Ensembl:ENSMUST00000103180 GeneID:668173
KEGG:mmu:668173 UCSC:uc008wcs.1 GeneTree:ENSGT00510000048446
InParanoid:B1AUE5 OrthoDB:EOG4TB4C1 NextBio:434205 Bgee:B1AUE5
Genevestigator:B1AUE5 Uniprot:B1AUE5
Length = 324
Score = 110 (43.8 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
LC +C E R + T CGH FC+ CI++ + +CP C P V+
Sbjct: 270 LCTLCLEERRHSTATPCGHLFCWECITEWCNTKTECPLCREKFPPQKLVY 319
>RGD|1591776 [details] [associations]
symbol:Pex10 "peroxisomal biogenesis factor 10" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO;IDA] [GO:0005779 "integral to peroxisomal
membrane" evidence=IEA;ISO] [GO:0007031 "peroxisome organization"
evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184 InterPro:IPR006845
RGD:1591776 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 GO:GO:0005778 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016558 InterPro:IPR017907 EMBL:CH473968 KO:K13346
PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
GeneTree:ENSGT00510000048446 OrthoDB:EOG4TB4C1 IPI:IPI00359803
RefSeq:NP_001102875.1 UniGene:Rn.111 Ensembl:ENSRNOT00000036819
GeneID:680424 KEGG:rno:680424 NextBio:718678 Uniprot:D3ZC81
Length = 324
Score = 110 (43.8 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
LC +C E R + T CGH FC+ CI++ + +CP C P V+
Sbjct: 270 LCTLCLEERRHSTATPCGHLFCWECITEWCNTKTECPLCREKFPPQKLVY 319
>RGD|1306993 [details] [associations]
symbol:Rad18 "RAD18 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0001741 "XY body"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005657 "replication fork" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009411 "response
to UV" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0045910 "negative regulation of DNA
recombination" evidence=ISO] InterPro:IPR001841 InterPro:IPR003034
InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089 PROSITE:PS50800
SMART:SM00184 SMART:SM00513 SMART:SM00734 RGD:1306993
Prosite:PS00518 GO:GO:0005634 GO:GO:0009411 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0007283
Gene3D:1.10.720.30 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0001741 GO:GO:0005657 GO:GO:0000403
GO:GO:0045910 IPI:IPI00951538 Ensembl:ENSRNOT00000008214
UCSC:RGD:1306993 ArrayExpress:F1LYK9 Uniprot:F1LYK9
Length = 528
Score = 113 (44.8 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 20 NDLL-CPICFELIREAHIT-RCGHTFCFSCISKCVELQIKCPKCSASL--PDMNSVFPNF 75
+DLL C ICFE A I +C H +C CI K + + +CP C ++ PD+ + N
Sbjct: 18 DDLLRCGICFEYFNIAVIIPQCSHNYCSLCIRKFLSYKTQCPTCCVAVTEPDLRN---NR 74
Query: 76 LLNELVQ 82
LL+ELV+
Sbjct: 75 LLDELVK 81
>UNIPROTKB|J9P3L7 [details] [associations]
symbol:LONRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 OMA:GHSYCRR
GeneTree:ENSGT00440000033329 EMBL:AAEX03010436 EMBL:AAEX03010437
Ensembl:ENSCAFT00000047804 Uniprot:J9P3L7
Length = 769
Score = 115 (45.5 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 26/91 (28%), Positives = 42/91 (46%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+D C +C L E T CGH+FC +C+ +C++ CP C SL + L
Sbjct: 471 SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVTQL 530
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ K+ + + D +E +L+
Sbjct: 531 LEELIVKYLPDELSERKKIYDEETAELSHLT 561
>ZFIN|ZDB-GENE-070424-161 [details] [associations]
symbol:ftr55 "finTRIM family, member 55"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070424-161 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:BX322664
GeneTree:ENSGT00670000097622 IPI:IPI00630920
Ensembl:ENSDART00000019843 Uniprot:F1Q547
Length = 531
Score = 113 (44.8 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 16 SPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFP 73
S + +CP+C +L+++ CGH++C SCI++ + + CP+C + +
Sbjct: 5 SVSEEQFVCPVCLDLLKDPVTIPCGHSYCMSCITEFWDQKSIYSCPQCRQTYKPRPVLGK 64
Query: 74 NFLLNELVQKHKIKSAQDSD 93
N +L E+V++ K K+ +D
Sbjct: 65 NTMLAEVVEQLK-KTRLQTD 83
>UNIPROTKB|Q17RB8 [details] [associations]
symbol:LONRF1 "LON peptidase N-terminal domain and RING
finger protein 1" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 EMBL:AC123777 EMBL:AK074329
EMBL:AK297266 EMBL:AK300538 EMBL:BC004538 EMBL:BC117381
EMBL:BC117385 IPI:IPI00291662 IPI:IPI00872653 RefSeq:NP_689484.3
UniGene:Hs.180178 ProteinModelPortal:Q17RB8 SMR:Q17RB8
IntAct:Q17RB8 STRING:Q17RB8 PhosphoSite:Q17RB8 DMDM:257051033
PaxDb:Q17RB8 PRIDE:Q17RB8 Ensembl:ENST00000398246
Ensembl:ENST00000533751 GeneID:91694 KEGG:hsa:91694 UCSC:uc003wwd.1
CTD:91694 GeneCards:GC08M012579 HGNC:HGNC:26302 HPA:HPA023584
HPA:HPA024814 neXtProt:NX_Q17RB8 PharmGKB:PA128394743
eggNOG:COG2802 HOGENOM:HOG000060199 HOVERGEN:HBG081924
InParanoid:Q17RB8 OMA:GHSYCRR OrthoDB:EOG4WQ12B GenomeRNAi:91694
NextBio:77403 ArrayExpress:Q17RB8 Bgee:Q17RB8 CleanEx:HS_LONRF1
Genevestigator:Q17RB8 Uniprot:Q17RB8
Length = 773
Score = 115 (45.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 26/91 (28%), Positives = 42/91 (46%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDM---NSVFPNFL 76
+D C +C L E T CGH+FC +C+ +C++ CP C SL + L
Sbjct: 475 SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQL 534
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
L EL+ K+ + + D +E +L+
Sbjct: 535 LEELIVKYLPDELSERKKIYDEETAELSHLT 565
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNFLLNEL 80
C +C E ++E I CGH FC +CI++ +E CP C + S+ PN L +
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT-SRYRSLRPNRQLGSM 87
Query: 81 VQ 82
V+
Sbjct: 88 VE 89
>UNIPROTKB|C9IZE0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 OrthoDB:EOG4K3KX1 HGNC:HGNC:30834
HOGENOM:HOG000199013 IPI:IPI00945336 ProteinModelPortal:C9IZE0
SMR:C9IZE0 STRING:C9IZE0 Ensembl:ENST00000471155
ArrayExpress:C9IZE0 Bgee:C9IZE0 Uniprot:C9IZE0
Length = 114
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 22/89 (24%), Positives = 43/89 (48%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVE------------LQIKCPKCSASL- 65
+ +L CPIC+ + + + C HTFC +C+ ++ + +KCP C +
Sbjct: 5 EEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITE 64
Query: 66 --PD-MNSVFPNFLLNELVQKHKIKSAQD 91
P + S+ NF L +++K++ + D
Sbjct: 65 IAPTGIESLPVNFALRAIIEKYQQEDHPD 93
>UNIPROTKB|C9J9F0 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00945495
ProteinModelPortal:C9J9F0 SMR:C9J9F0 STRING:C9J9F0
Ensembl:ENST00000494486 ArrayExpress:C9J9F0 Bgee:C9J9F0
Uniprot:C9J9F0
Length = 111
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 22/89 (24%), Positives = 43/89 (48%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVE------------LQIKCPKCSASL- 65
+ +L CPIC+ + + + C HTFC +C+ ++ + +KCP C +
Sbjct: 5 EEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITE 64
Query: 66 --PD-MNSVFPNFLLNELVQKHKIKSAQD 91
P + S+ NF L +++K++ + D
Sbjct: 65 IAPTGIESLPVNFALRAIIEKYQQEDHPD 93
>UNIPROTKB|C9JE08 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00947483
ProteinModelPortal:C9JE08 SMR:C9JE08 STRING:C9JE08
Ensembl:ENST00000471396 ArrayExpress:C9JE08 Bgee:C9JE08
Uniprot:C9JE08
Length = 155
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 22/89 (24%), Positives = 43/89 (48%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVE------------LQIKCPKCSASL- 65
+ +L CPIC+ + + + C HTFC +C+ ++ + +KCP C +
Sbjct: 5 EEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITE 64
Query: 66 --PD-MNSVFPNFLLNELVQKHKIKSAQD 91
P + S+ NF L +++K++ + D
Sbjct: 65 IAPTGIESLPVNFALRAIIEKYQQEDHPD 93
>UNIPROTKB|K7GKN4 [details] [associations]
symbol:TRIM27 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR020457 Pfam:PF00643 PRINTS:PR01406
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104307 EMBL:FP085562
Ensembl:ENSSSCT00000035675 Uniprot:K7GKN4
Length = 334
Score = 110 (43.8 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNFLLNEL 80
CP+C + E + CGH C +C+++C E + CP+C + P + + PN L +
Sbjct: 16 CPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETFPQRH-MRPNRHLANV 74
Query: 81 VQ 82
Q
Sbjct: 75 TQ 76
>ZFIN|ZDB-GENE-080219-44 [details] [associations]
symbol:ftr58 "finTRIM family, member 58"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080219-44 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:BX005466 IPI:IPI00972068 Ensembl:ENSDART00000056426
Bgee:E7F4P5 Uniprot:E7F4P5
Length = 542
Score = 113 (44.8 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCIS----KCVELQI-KCPKCSASLPDMNSVFPN 74
N+ +C +C +L+++ CGH++C SCI+ + E ++ CP+C + ++ N
Sbjct: 11 NEFMCSVCLDLLKDPVAIHCGHSYCKSCITDHWNQEDEKKVYSCPQCRETFKPRPALAKN 70
Query: 75 FLLNELVQK-HKIKSAQD 91
+L E+V+K K K + D
Sbjct: 71 TILAEMVEKLKKTKPSAD 88
>MGI|MGI:1859162 [details] [associations]
symbol:Rnf10 "ring finger protein 10" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010626 "negative regulation of Schwann cell proliferation"
evidence=ISO] [GO:0031643 "positive regulation of myelination"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1859162
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0010626 GO:GO:0031643 eggNOG:NOG330884
GeneTree:ENSGT00390000001731 HSSP:Q9CQJ4 CTD:9921
HOGENOM:HOG000006763 HOVERGEN:HBG059523 ChiTaRS:RNF10 EMBL:AB026621
EMBL:AK129106 EMBL:AK146728 EMBL:AK165617 EMBL:AK168523
EMBL:AK172065 EMBL:BC010342 EMBL:BC058527 IPI:IPI00752724
IPI:IPI00757555 RefSeq:NP_057907.2 UniGene:Mm.30051
ProteinModelPortal:Q3UIW5 SMR:Q3UIW5 IntAct:Q3UIW5 STRING:Q3UIW5
PhosphoSite:Q3UIW5 PRIDE:Q3UIW5 Ensembl:ENSMUST00000112096
GeneID:50849 KEGG:mmu:50849 UCSC:uc008zdk.2 NextBio:307823
Bgee:Q3UIW5 CleanEx:MM_RNF10 Genevestigator:Q3UIW5
GermOnline:ENSMUSG00000041740 Uniprot:Q3UIW5
Length = 804
Score = 115 (45.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 38/126 (30%), Positives = 59/126 (46%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVELQ----IKCPKCSASL--PDMNSVFPN--- 74
CPIC A ITRCGH FC++CI + L KCP C +S+ D+ SV
Sbjct: 225 CPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLKSVVATESR 284
Query: 75 -FLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQ 133
+ + + + +K ++ L S+ N+ P +NL E L+Q LL A
Sbjct: 285 QYAVGDTITMQLMK--REKGVLVALPKSKWVNVDHP-INLGDEQLSQYSKLLLASKEQVL 341
Query: 134 YKLLYE 139
++++ E
Sbjct: 342 HRVVLE 347
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 113 (44.8 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 2 SATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKC 61
S+TS+ SR +++ PP + LCPI ++ + + G TF C+ C +L PK
Sbjct: 18 SSTSSSSRQQQQEQQPPV-EFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNF-IPKL 75
Query: 62 S---ASLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVL 118
+ SLPD +++ PN LN K I + D+ G+ S Q PD + + +L
Sbjct: 76 NDDEESLPDFSNIIPN--LN---MKSTIDTWCDTVGV-----SRPQP---PDYSTVERIL 122
Query: 119 NQRKHLLEAESSVAQYKLL 137
Q+ + E V++ +LL
Sbjct: 123 RQQMPPPDVEIRVSEQELL 141
>ZFIN|ZDB-GENE-060519-46 [details] [associations]
symbol:zgc:136302 "zgc:136302" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-060519-46 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG106862 EMBL:BC097227 IPI:IPI00995388 UniGene:Dr.83099
ProteinModelPortal:Q4V8S4 Uniprot:Q4V8S4
Length = 563
Score = 113 (44.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 19 DNDLL--CPICFELIREAHITRCGHTFCFSCISKCVELQ-IK----CPKCSASLPDMNSV 71
DN L CPIC L+ T CGH+FC C+++ + +K CP+C + ++
Sbjct: 6 DNKSLFNCPICLHLLNNPVTTYCGHSFCMDCLNEFWDRDTLKGVYSCPQCRQTFTPRPAL 65
Query: 72 FPNFLLNELVQKHKIKSAQ 90
N ++ E+V++ KI++ +
Sbjct: 66 SKNTVIAEVVERMKIETPE 84
>ZFIN|ZDB-GENE-060421-3419 [details] [associations]
symbol:btr20 "bloodthirsty-related gene family,
member 20" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060421-3419 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862 UniGene:Dr.23709
EMBL:BC065891 IPI:IPI00758608 ProteinModelPortal:Q6P000
InParanoid:Q6P000 Uniprot:Q6P000
Length = 564
Score = 113 (44.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 17 PPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQ--IKCPKCSASLPDMNSVFPN 74
P +L C IC E+ + T CGH FC SC++K CP C + + N
Sbjct: 51 PLSEELRCSICLEVFTDPVSTPCGHNFCKSCLNKYWNNSQTCSCPNCKETFTQRPDLKIN 110
Query: 75 FLLNELVQKHKIKSAQD-SDGLRDFVASESQNLSLPDVNLMLEVLNQRKHLLEAESSVAQ 133
L E+ + +K K ++ ++ + D E + L L+ ++ + HL E S +A
Sbjct: 111 TTLREISEHYKEKRPEEKAEVVCDMC--EGRKLKALKSCLVCQISYCQTHL-EPHSRIAG 167
Query: 134 YK 135
K
Sbjct: 168 LK 169
>UNIPROTKB|F1NH39 [details] [associations]
symbol:F1NH39 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00690000101808
EMBL:AADN02045138 EMBL:AADN02058957 EMBL:AADN02058958
IPI:IPI00575345 Ensembl:ENSGALT00000019575 OMA:IVAECKE
Uniprot:F1NH39
Length = 406
Score = 111 (44.1 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 20 NDLLCPICFELIRE-AHITRCGHTFCFSCISKCVE---LQIKCPKCSASLPDMNSVF-PN 74
++L CP+C E + + CGH FC +C+++C E ++ CP+C +P +F PN
Sbjct: 11 DELTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSARRLCCPQCREPVPQR--LFRPN 68
Query: 75 FLLNELV 81
L +V
Sbjct: 69 RSLGNIV 75
>ZFIN|ZDB-GENE-090313-307 [details] [associations]
symbol:pdzrn3a "PDZ domain containing RING finger
3a" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00595
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR001478
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
PROSITE:PS50089 PROSITE:PS50106 PROSITE:PS50145 PROSITE:PS51081
SMART:SM00184 SMART:SM00228 Prosite:PS00518
ZFIN:ZDB-GENE-090313-307 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00510000046421 EMBL:CR354544 EMBL:CT027567
IPI:IPI00897410 ProteinModelPortal:E7FGS6
Ensembl:ENSDART00000112965 Uniprot:E7FGS6
Length = 1033
Score = 116 (45.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP-KCSA-SLPDM 68
L R P D DL+C +C +++ + T CGH FC +C + + CP +C S ++
Sbjct: 5 LDRFEGPVDPDLICKLCGKVLEDPLATPCGHVFCAACALQWLSKVNSCPVQCQKISNKEL 64
Query: 69 NSVFPNFLLNELVQKHKIK 87
N V P L L+ K IK
Sbjct: 65 NQVLP---LKNLILKLDIK 80
>UNIPROTKB|C9J614 [details] [associations]
symbol:TRIM59 "Tripartite motif-containing protein 59"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC024221 HGNC:HGNC:30834 HOGENOM:HOG000199013 IPI:IPI00947059
ProteinModelPortal:C9J614 SMR:C9J614 STRING:C9J614
Ensembl:ENST00000479460 ArrayExpress:C9J614 Bgee:C9J614
Uniprot:C9J614
Length = 177
Score = 103 (41.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 22/89 (24%), Positives = 43/89 (48%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVE------------LQIKCPKCSASL- 65
+ +L CPIC+ + + + C HTFC +C+ ++ + +KCP C +
Sbjct: 5 EEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITE 64
Query: 66 --PD-MNSVFPNFLLNELVQKHKIKSAQD 91
P + S+ NF L +++K++ + D
Sbjct: 65 IAPTGIESLPVNFALRAIIEKYQQEDHPD 93
>ZFIN|ZDB-GENE-071022-4 [details] [associations]
symbol:pdzrn3b "PDZ domain containing RING finger 3b"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] EMBL:JN108761
Uniprot:K9K836
Length = 1053
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/91 (32%), Positives = 40/91 (43%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP-KCSA-SLPDM 68
L R D D C +C +++ + T CGH FC C+ V Q CP KC S ++
Sbjct: 5 LDRFKGAVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQSSCPVKCQRISTKEL 64
Query: 69 NSVFPNFLLNELVQKHKIKSAQDSDGLRDFV 99
N V P L L+ K IK + G V
Sbjct: 65 NHVLP---LKNLILKLDIKCDNHARGCEKIV 92
>UNIPROTKB|J9NYP9 [details] [associations]
symbol:RNF213 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003593 PROSITE:PS50089 SMART:SM00184 SMART:SM00382
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0017111
InterPro:IPR017907 GeneTree:ENSGT00510000049907 EMBL:AAEX03006199
EMBL:AAEX03006200 Ensembl:ENSCAFT00000045693 Uniprot:J9NYP9
Length = 4036
Score = 122 (48.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCPKCSASLPDMNSVFPNFLLNELVQ 82
CP+C +E CGH FC CI+ C+ L Q+ CP C LP S+ N + ++
Sbjct: 3257 CPVCLGDAQEPVSLPCGHVFCLRCINTCITLGQMACPYCLTDLPKDFSLTVNQEHRDAIR 3316
Query: 83 KHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVL 118
KH + D V++ + P +++VL
Sbjct: 3317 KHACLRQMCNSFFLDLVSTVCFKDNTPPEKDVIDVL 3352
>TAIR|locus:2097830 [details] [associations]
symbol:SIS3 "SUGAR-INSENSITIVE 3" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010182 "sugar mediated signaling pathway"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0010182
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AL049658 EMBL:AK117391 IPI:IPI00536247 PIR:T06684
RefSeq:NP_190382.2 UniGene:At.21725 ProteinModelPortal:Q8GYT9
SMR:Q8GYT9 STRING:Q8GYT9 PaxDb:Q8GYT9 PRIDE:Q8GYT9
EnsemblPlants:AT3G47990.1 GeneID:823954 KEGG:ath:AT3G47990
TAIR:At3g47990 eggNOG:NOG317826 HOGENOM:HOG000077621
InParanoid:Q8GYT9 KO:K16284 OMA:INWKRYR PhylomeDB:Q8GYT9
ProtClustDB:CLSN2680356 Genevestigator:Q8GYT9 Uniprot:Q8GYT9
Length = 358
Score = 110 (43.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 13 RQHSPPDNDLLCPICFELIREAHITR---CGHTFCFSCISKCVELQIKCPKCSASL-PDM 68
R + PD+ C IC E H R C H F CI + + L +KCP+C S+ PD+
Sbjct: 224 RLKAVPDDCGECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPDL 283
Query: 69 N-SVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLS 107
+ S N L + ++H + + S+ ++ S+ Q+ S
Sbjct: 284 DLSALSN-LQSSGTEQHSQVNTETSEAR--YIRSQPQSES 320
>UNIPROTKB|F1MRX7 [details] [associations]
symbol:PDZRN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00595
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR001478
InterPro:IPR008974 InterPro:IPR013323 PROSITE:PS50089
PROSITE:PS50106 PROSITE:PS50145 SMART:SM00184 SMART:SM00228
Prosite:PS00518 GO:GO:0046872 GO:GO:0007528 GO:GO:0008270
GO:GO:0031594 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
KO:K15682 GeneTree:ENSGT00510000046421 CTD:23024 OMA:IPVDECE
EMBL:DAAA02053994 EMBL:DAAA02053995 EMBL:DAAA02053996
EMBL:DAAA02053997 IPI:IPI00700505 RefSeq:XP_002697002.1
Ensembl:ENSBTAT00000024807 GeneID:509083 KEGG:bta:509083
NextBio:20868814 Uniprot:F1MRX7
Length = 1061
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP-KCSASLP--D 67
L R D DL C +C +++ + T CGH FC C+ V + CP +C L +
Sbjct: 5 LDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKE 64
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSDG 94
+N V P L L+ K IK A + G
Sbjct: 65 LNHVLP---LKRLILKLDIKCAHAARG 88
>RGD|1305250 [details] [associations]
symbol:Pdzrn3 "PDZ domain containing RING finger 3"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO;ISS] [GO:0007528 "neuromuscular
junction development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0031594 "neuromuscular junction"
evidence=ISO] Pfam:PF00595 InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR001478 InterPro:IPR008974 InterPro:IPR013323
PROSITE:PS50089 PROSITE:PS50106 PROSITE:PS50145 SMART:SM00184
SMART:SM00228 UniPathway:UPA00143 RGD:1305250 Prosite:PS00518
GO:GO:0046872 GO:GO:0007528 GO:GO:0008270 GO:GO:0031594
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
HOGENOM:HOG000231379 HOVERGEN:HBG053554 OrthoDB:EOG4T1HM7
EMBL:AABR03034730 EMBL:AABR03032044 EMBL:AABR03034150
EMBL:AABR03035737 EMBL:AABR03033172 EMBL:AABR03038940
IPI:IPI00394300 UniGene:Rn.3111 ProteinModelPortal:P68907
SMR:P68907 PRIDE:P68907 UCSC:RGD:1305250 eggNOG:NOG324254
InParanoid:P68907 Genevestigator:P68907
GermOnline:ENSRNOG00000005632 Uniprot:P68907
Length = 1062
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP-KCSASLP--D 67
L R D DL C +C +++ + T CGH FC C+ V + CP +C L +
Sbjct: 5 LDRFDGEVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPSRCRGRLSAKE 64
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSDG 94
+N V P L L+ K IK A + G
Sbjct: 65 LNHVLP---LKRLILKLDIKCAHAARG 88
>UNIPROTKB|P68907 [details] [associations]
symbol:Pdzrn3 "E3 ubiquitin-protein ligase PDZRN3"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00595 InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR001478 InterPro:IPR008974 InterPro:IPR013323
PROSITE:PS50089 PROSITE:PS50106 PROSITE:PS50145 SMART:SM00184
SMART:SM00228 UniPathway:UPA00143 RGD:1305250 Prosite:PS00518
GO:GO:0046872 GO:GO:0007528 GO:GO:0008270 GO:GO:0031594
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
HOGENOM:HOG000231379 HOVERGEN:HBG053554 OrthoDB:EOG4T1HM7
EMBL:AABR03034730 EMBL:AABR03032044 EMBL:AABR03034150
EMBL:AABR03035737 EMBL:AABR03033172 EMBL:AABR03038940
IPI:IPI00394300 UniGene:Rn.3111 ProteinModelPortal:P68907
SMR:P68907 PRIDE:P68907 UCSC:RGD:1305250 eggNOG:NOG324254
InParanoid:P68907 Genevestigator:P68907
GermOnline:ENSRNOG00000005632 Uniprot:P68907
Length = 1062
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP-KCSASLP--D 67
L R D DL C +C +++ + T CGH FC C+ V + CP +C L +
Sbjct: 5 LDRFDGEVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPSRCRGRLSAKE 64
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSDG 94
+N V P L L+ K IK A + G
Sbjct: 65 LNHVLP---LKRLILKLDIKCAHAARG 88
>MGI|MGI:1933157 [details] [associations]
symbol:Pdzrn3 "PDZ domain containing RING finger 3"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007528 "neuromuscular junction development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00595
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR001478
InterPro:IPR008974 InterPro:IPR013323 PROSITE:PS50089
PROSITE:PS50106 PROSITE:PS50145 SMART:SM00184 SMART:SM00228
UniPathway:UPA00143 MGI:MGI:1933157 Prosite:PS00518 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0031594 Gene3D:3.30.40.10
InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 HOGENOM:HOG000231379
HOVERGEN:HBG053554 KO:K15682 GeneTree:ENSGT00510000046421 CTD:23024
eggNOG:NOG284098 OMA:IPVDECE OrthoDB:EOG4T1HM7 EMBL:HM560981
EMBL:AF127084 EMBL:AF127085 EMBL:AK173098 EMBL:BC010329
IPI:IPI00135609 IPI:IPI00551426 IPI:IPI00970713 RefSeq:NP_061372.2
UniGene:Mm.321654 ProteinModelPortal:Q69ZS0 SMR:Q69ZS0
IntAct:Q69ZS0 STRING:Q69ZS0 PhosphoSite:Q69ZS0 PRIDE:Q69ZS0
Ensembl:ENSMUST00000075994 GeneID:55983 KEGG:mmu:55983
UCSC:uc009dcd.2 UCSC:uc012eps.1 InParanoid:Q69ZS0 ChiTaRS:PDZRN3
NextBio:311690 Bgee:Q69ZS0 CleanEx:MM_PDZRN3 Genevestigator:Q69ZS0
GermOnline:ENSMUSG00000035357 Uniprot:Q69ZS0
Length = 1063
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 11 LKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCP-KCSASLP--D 67
L R D DL C +C +++ + T CGH FC C+ V + CP +C L +
Sbjct: 5 LDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKE 64
Query: 68 MNSVFPNFLLNELVQKHKIKSAQDSDG 94
+N V P L L+ K IK A + G
Sbjct: 65 LNHVLP---LKRLILKLDIKCAHAARG 88
>UNIPROTKB|Q5D7H8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:230833 "Callicebus donacophilus" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843519
ProteinModelPortal:Q5D7H8 SMR:Q5D7H8 Uniprot:Q5D7H8
Length = 494
Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCI------SKCVELQIKCPKCSASLPDMNSVFPN 74
++ CPIC EL+ E CGH+FC +CI S + + CP C S P N + PN
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKESTLHQGERSCPLCRISYPSEN-LRPN 70
Query: 75 FLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL 108
L +V++ + +G + D A + L L
Sbjct: 71 RHLANIVERLREVVLSPEEGQKVDLCARHGEKLLL 105
>UNIPROTKB|Q5D7I2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:43777 "Pithecia pithecia" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843515
ProteinModelPortal:Q5D7I2 SMR:Q5D7I2 Uniprot:Q5D7I2
Length = 494
Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 21 DLLCPICFELIREAHITRCGHTFCFSCIS----KCV--ELQIKCPKCSASLPDMNSVFPN 74
++ CPIC EL+ E CGH+FC +CI+ K + + + CP C S P N + PN
Sbjct: 12 EVTCPICLELLTEPLSLDCGHSFCQACITANHKKSMLHQGERSCPLCRISYPSEN-LRPN 70
Query: 75 FLLNELVQKHKIKSAQDSDGLR-DFVASESQNLSL 108
L +V++ + +G + D A + L L
Sbjct: 71 RHLANIVERLREVMLSPEEGQKVDHCARHGEKLLL 105
>FB|FBgn0052369 [details] [associations]
symbol:CG32369 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50089 PROSITE:PS50293 SMART:SM00028
SMART:SM00184 Prosite:PS00518 EMBL:AE014296 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 GeneTree:ENSGT00440000033329
FlyBase:FBgn0052369 UniGene:Dm.33514 GeneID:38873
KEGG:dme:Dmel_CG32369 GenomeRNAi:38873 NextBio:810801
RefSeq:NP_001246660.1 RefSeq:NP_729296.1 ProteinModelPortal:Q9VSB2
SMR:Q9VSB2 MINT:MINT-298560 EnsemblMetazoa:FBtr0076783
EnsemblMetazoa:FBtr0304992 UCSC:CG32369-RA InParanoid:Q9VSB2
OMA:VEYICDE PhylomeDB:Q9VSB2 ArrayExpress:Q9VSB2 Bgee:Q9VSB2
Uniprot:Q9VSB2
Length = 1066
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 6 TPSRSLKRQHSP----PDND-LLCPICFELIREAHITRCGHTFCFSC---ISKCVELQIK 57
+P+R L R SP D D L+CP+C +++R T CGHTFC C I++C Q++
Sbjct: 161 SPTREL-RVPSPLQDLEDFDPLMCPLCSDILRCPVTTNCGHTFCRQCCETITQCNICQVR 219
Query: 58 CPKCSASLP 66
P+ AS P
Sbjct: 220 FPRIQASSP 228
Score = 112 (44.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 20 NDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMN 69
+D C +C + + +T CGHT+C C+ +C++ CP C + L + N
Sbjct: 684 SDFDCVVCSRTLWKPVVTPCGHTYCLVCLDRCMDYNSPCPLCMSPLVEFN 733
>WB|WBGene00009477 [details] [associations]
symbol:tag-214 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] InterPro:IPR001841 InterPro:IPR001878
InterPro:IPR014891 Pfam:PF08783 PROSITE:PS50089 PROSITE:PS50158
PROSITE:PS51282 SMART:SM00184 SMART:SM00343 GO:GO:0005634
GO:GO:0009792 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0001703 eggNOG:COG5222
GeneTree:ENSGT00610000086096 EMBL:Z81532 PIR:T21861
RefSeq:NP_001032975.1 ProteinModelPortal:O62235 SMR:O62235
PaxDb:O62235 PRIDE:O62235 EnsemblMetazoa:F36F2.3a GeneID:172720
KEGG:cel:CELE_F36F2.3 UCSC:F36F2.3b CTD:172720 WormBase:F36F2.3a
HOGENOM:HOG000019649 InParanoid:O62235 OMA:RIRIGLK NextBio:876727
Uniprot:O62235
Length = 1128
Score = 108 (43.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 4 TSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRC-GHTFCFSCISKCV---ELQIKCP 59
+S+P+++ ++ PP+ LLCPIC L +EA +T C G+++C CI + + Q KCP
Sbjct: 227 SSSPAQTSRKV--PPE--LLCPICQSLFKEAIVTSCCGNSYCADCIEARILDPDNQ-KCP 281
Query: 60 --KCSASLPDMNSVFPNFLLNE 79
C + + S+ PN L +
Sbjct: 282 GADCGKDI-SITSIIPNKTLRD 302
Score = 33 (16.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 77 LNELVQKHKIKSAQDSDGLRDFVASESQN 105
++ ++ ++ AQD+DG +QN
Sbjct: 631 IDGIIAEYGNVQAQDTDGDAQVADENAQN 659
>UNIPROTKB|P14373 [details] [associations]
symbol:TRIM27 "Zinc finger protein RFP" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070206
"protein trimerization" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0046872 "metal ion binding"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0002820 "negative regulation of
adaptive immune response" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006469
"negative regulation of protein kinase activity" evidence=IDA]
[GO:0090281 "negative regulation of calcium ion import"
evidence=IMP] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IMP] [GO:1900041 "negative regulation
of interleukin-2 secretion" evidence=IMP] [GO:0072643
"interferon-gamma secretion" evidence=IMP] [GO:0004714
"transmembrane receptor protein tyrosine kinase activity"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0045814 "negative regulation of gene expression, epigenetic"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 InterPro:IPR020457 Pfam:PF00622 Pfam:PF00643
PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0005654 GO:GO:0005887 EMBL:CH471081 GO:GO:0006469
GO:GO:0046872 GO:GO:0003677 GO:GO:0016605 GO:GO:0008283
GO:GO:0004714 GO:GO:0008270 GO:GO:0031965 GO:GO:0007283
GO:GO:0006351 GO:GO:0003676 GO:GO:0000122 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0032720 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0070206 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0072643
MIM:188550 Orphanet:146 GO:GO:1900041 GO:GO:0090281 GO:GO:0045814
HOVERGEN:HBG001357 GO:GO:0002820 EMBL:J03407 EMBL:AF230393
EMBL:AF230394 EMBL:AL662859 EMBL:AL662871 EMBL:BX000360
EMBL:BX537153 EMBL:BX005144 EMBL:BX119924 EMBL:CR759942 EMBL:Z84474
EMBL:Z84476 EMBL:BC013580 EMBL:BC066924 IPI:IPI00412657
IPI:IPI00426252 PIR:A28101 RefSeq:NP_006501.1 UniGene:Hs.440382
ProteinModelPortal:P14373 SMR:P14373 IntAct:P14373
MINT:MINT-1409274 STRING:P14373 PhosphoSite:P14373 DMDM:132517
PaxDb:P14373 PRIDE:P14373 DNASU:5987 Ensembl:ENST00000377194
Ensembl:ENST00000377199 Ensembl:ENST00000400720
Ensembl:ENST00000412687 Ensembl:ENST00000417660
Ensembl:ENST00000427689 Ensembl:ENST00000431123
Ensembl:ENST00000435528 Ensembl:ENST00000437160
Ensembl:ENST00000452265 GeneID:5987 KEGG:hsa:5987 UCSC:uc003nlr.3
UCSC:uc003nls.3 CTD:5987 GeneCards:GC06M028870 HGNC:HGNC:9975
HPA:HPA048684 MIM:602165 neXtProt:NX_P14373 PharmGKB:PA162406956
eggNOG:NOG252602 InParanoid:P14373 KO:K12009 OMA:FSGHVGS
OrthoDB:EOG4BVRTF PhylomeDB:P14373 ChiTaRS:TRIM27 GenomeRNAi:5987
NextBio:23317 ArrayExpress:P14373 Bgee:P14373 CleanEx:HS_TRIM27
Genevestigator:P14373 GermOnline:ENSG00000204713 Uniprot:P14373
Length = 513
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKC---VELQIKCPKCSASLPDMNSVFPNFLLNEL 80
CP+C + E + CGH C +C+++C E + CP+C + P + + PN L +
Sbjct: 16 CPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRH-MRPNRHLANV 74
Query: 81 VQ 82
Q
Sbjct: 75 TQ 76
>UNIPROTKB|E2R2P8 [details] [associations]
symbol:PEX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016558 "protein import into peroxisome
matrix" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0008270 GO:GO:0005779
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 PANTHER:PTHR23350 Pfam:PF04757
ProteinModelPortal:E2R2P8 Ensembl:ENSCAFT00000030837
NextBio:20862768 Uniprot:E2R2P8
Length = 326
Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 23 LCPICFELIREAHITRCGHTFCFSCISKCVELQIKCPKCSASLPDMNSVF 72
+C +C E R + T CGH FC+ CI++ + + +CP C P V+
Sbjct: 272 VCTLCLEERRHSTATPCGHLFCWECITQWCDTKTECPLCREKFPPQKLVY 321
>UNIPROTKB|E2R819 [details] [associations]
symbol:RNF213 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003593 PROSITE:PS50089 SMART:SM00184 SMART:SM00382
Prosite:PS00518 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0017111
InterPro:IPR017907 OMA:GMEFVQG GeneTree:ENSGT00510000049907
EMBL:AAEX03006199 EMBL:AAEX03006200 Ensembl:ENSCAFT00000009155
Uniprot:E2R819
Length = 4452
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 24 CPICFELIREAHITRCGHTFCFSCISKCVEL-QIKCPKCSASLPDMNSVFPNFLLNELVQ 82
CP+C +E CGH FC CI+ C+ L Q+ CP C LP S+ N + ++
Sbjct: 3244 CPVCLGDAQEPVSLPCGHVFCLRCINTCITLGQMACPYCLTDLPKDFSLTVNQEHRDAIR 3303
Query: 83 KHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVL 118
KH + D V++ + P +++VL
Sbjct: 3304 KHACLRQMCNSFFLDLVSTVCFKDNTPPEKDVIDVL 3339
>UNIPROTKB|A2AE51 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:BX927221 EMBL:CR759838
EMBL:CR788282 EMBL:BX248419 EMBL:CR388382 EMBL:BX927189
HGNC:HGNC:12962 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00790584 SMR:A2AE51 Ensembl:ENST00000415966
Ensembl:ENST00000420345 Ensembl:ENST00000424124
Ensembl:ENST00000438064 Ensembl:ENST00000444979
Ensembl:ENST00000450103 Ensembl:ENST00000451189 Uniprot:A2AE51
Length = 159
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/129 (26%), Positives = 55/129 (42%)
Query: 3 ATSTPSRSLKRQHSPPDNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQIK---CP 59
ATS P RSL + ++ C IC + +R+ CGH FC SC + + CP
Sbjct: 2 ATSAPLRSL-------EEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCP 54
Query: 60 KCSASLPDMNSVFPNFLLNELVQKHKIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLN 119
C N + P + L +++ H +D D ++ F A D+ L+ L
Sbjct: 55 LCKKPFKKEN-IRPVWQLEKILN-HLSTLRRDRDKIQGFQAKGEA-----DILAALKKLQ 107
Query: 120 QRKHLLEAE 128
++ + AE
Sbjct: 108 DQRQYIVAE 116
>UNIPROTKB|F1PIL1 [details] [associations]
symbol:TRIM13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0097038 "perinuclear endoplasmic reticulum"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IEA] [GO:0016239 "positive
regulation of macroautophagy" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010332 "response to
gamma radiation" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005789 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0010332 GO:GO:0004871 GO:GO:0010942 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0097038 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 GO:GO:0016239
GeneTree:ENSGT00690000101726 OMA:QPLNIFC EMBL:AAEX03013096
Ensembl:ENSCAFT00000006908 Uniprot:F1PIL1
Length = 455
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/116 (26%), Positives = 49/116 (42%)
Query: 19 DNDLLCPICFELIREAHITRCGHTFCFSCISKCVELQI----------KCPKC--SASLP 66
+ DL CPIC L + + C H FC C+ +E + KCP C S
Sbjct: 53 EEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGTVRNSLWRASPFKCPTCRKETSAT 112
Query: 67 DMNSVFPNFLLNELVQKH-KIKSAQDSDGLRDFVASESQNLSLPDVNLMLEVLNQR 121
+NS+ N+ L +V+K+ KIK + + + L D+ L+ + R
Sbjct: 113 GVNSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR 168
WARNING: HSPs involving 392 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 140 140 0.00091 102 3 11 22 0.41 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 642
No. of states in DFA: 557 (59 KB)
Total size of DFA: 131 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.99u 0.08s 16.07t Elapsed: 00:00:01
Total cpu time: 16.01u 0.08s 16.09t Elapsed: 00:00:01
Start: Thu Aug 15 10:57:47 2013 End: Thu Aug 15 10:57:48 2013
WARNINGS ISSUED: 2