Query psy10662
Match_columns 221
No_of_seqs 439 out of 1073
Neff 11.9
Searched_HMMs 29240
Date Fri Aug 16 15:25:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10662.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10662hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 5.4E-42 1.8E-46 251.6 25.8 200 4-220 94-333 (344)
2 1vyh_C Platelet-activating fac 100.0 2.5E-41 8.7E-46 253.8 26.9 204 1-220 118-371 (410)
3 2ynn_A Coatomer subunit beta'; 100.0 4.2E-41 1.5E-45 243.3 26.6 207 1-220 23-261 (304)
4 3ow8_A WD repeat-containing pr 100.0 8.4E-41 2.9E-45 243.4 26.2 188 1-217 132-320 (321)
5 3ow8_A WD repeat-containing pr 100.0 4.1E-40 1.4E-44 239.8 25.8 191 1-220 90-281 (321)
6 1vyh_C Platelet-activating fac 100.0 3.3E-40 1.1E-44 247.8 25.2 201 1-217 160-410 (410)
7 1got_B GT-beta; complex (GTP-b 100.0 4.4E-39 1.5E-43 236.2 27.9 194 1-220 107-303 (340)
8 1got_B GT-beta; complex (GTP-b 100.0 1.9E-39 6.5E-44 238.1 25.2 185 4-215 155-340 (340)
9 2pbi_B Guanine nucleotide-bind 100.0 3E-39 1E-43 238.2 25.9 188 1-215 164-354 (354)
10 2xzm_R RACK1; ribosome, transl 100.0 3.3E-38 1.1E-42 231.8 29.6 219 2-220 38-342 (343)
11 3frx_A Guanine nucleotide-bind 100.0 1.5E-38 5E-43 231.5 27.2 204 1-219 75-318 (319)
12 4g56_B MGC81050 protein; prote 100.0 2.8E-39 9.5E-44 238.6 23.4 188 1-218 149-343 (357)
13 4ery_A WD repeat-containing pr 100.0 1.9E-38 6.4E-43 230.1 27.1 192 1-220 33-225 (312)
14 2pm7_B Protein transport prote 100.0 1.1E-38 3.9E-43 229.9 25.3 196 1-218 19-238 (297)
15 4gqb_B Methylosome protein 50; 100.0 5E-39 1.7E-43 235.8 23.2 204 1-220 40-291 (344)
16 3frx_A Guanine nucleotide-bind 100.0 2.7E-38 9.2E-43 230.1 26.8 189 3-220 30-229 (319)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-38 4E-43 234.3 24.9 192 1-216 26-223 (345)
18 2ynn_A Coatomer subunit beta'; 100.0 9.5E-38 3.3E-42 225.8 27.2 202 1-219 65-303 (304)
19 3iz6_a 40S ribosomal protein R 100.0 4.4E-38 1.5E-42 234.1 24.6 199 3-219 170-376 (380)
20 3f3f_A Nucleoporin SEH1; struc 100.0 4.8E-38 1.6E-42 230.3 24.4 220 1-220 21-339 (351)
21 1nr0_A Actin interacting prote 100.0 1E-37 3.6E-42 244.9 27.2 214 1-220 69-357 (611)
22 4h5i_A Guanine nucleotide-exch 100.0 1.4E-37 4.8E-42 230.1 25.9 194 1-219 143-344 (365)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.1E-38 3.1E-42 229.6 23.9 208 1-219 71-284 (345)
24 2pbi_B Guanine nucleotide-bind 100.0 4.5E-37 1.5E-41 226.6 27.3 190 1-219 74-272 (354)
25 1erj_A Transcriptional repress 100.0 4.2E-37 1.4E-41 229.8 26.7 209 1-220 133-343 (393)
26 4g56_B MGC81050 protein; prote 100.0 1.8E-37 6E-42 229.0 22.5 205 1-220 52-303 (357)
27 3bg1_A Protein SEC13 homolog; 100.0 1.3E-37 4.5E-42 226.2 20.9 196 1-218 23-247 (316)
28 4aow_A Guanine nucleotide-bind 100.0 1.8E-36 6E-41 221.8 26.9 220 1-220 48-339 (340)
29 3vl1_A 26S proteasome regulato 100.0 2.8E-37 9.6E-42 232.3 23.2 205 1-220 107-324 (420)
30 3iz6_a 40S ribosomal protein R 100.0 4.3E-37 1.5E-41 228.7 24.0 198 1-220 76-331 (380)
31 2hes_X YDR267CP; beta-propelle 100.0 9E-37 3.1E-41 223.0 24.5 194 4-219 25-231 (330)
32 2j04_B YDR362CP, TAU91; beta p 100.0 1.4E-37 4.9E-42 238.8 19.9 190 2-219 224-429 (524)
33 1erj_A Transcriptional repress 100.0 5.1E-36 1.7E-40 223.9 26.9 201 1-219 175-390 (393)
34 2hes_X YDR267CP; beta-propelle 100.0 1.3E-36 4.5E-41 222.1 23.2 200 1-219 68-281 (330)
35 4ery_A WD repeat-containing pr 100.0 5.8E-36 2E-40 217.0 26.3 192 1-220 75-270 (312)
36 3dwl_C Actin-related protein 2 100.0 9.3E-38 3.2E-42 231.9 16.5 208 1-220 21-238 (377)
37 2ymu_A WD-40 repeat protein; u 100.0 3.6E-36 1.2E-40 234.6 25.4 182 1-215 395-577 (577)
38 2pm7_B Protein transport prote 100.0 5.9E-36 2E-40 215.7 24.3 197 2-217 66-284 (297)
39 1nr0_A Actin interacting prote 100.0 1.3E-35 4.5E-40 233.0 28.2 203 1-219 157-398 (611)
40 3dm0_A Maltose-binding peripla 100.0 5.6E-36 1.9E-40 238.2 24.9 193 3-220 395-594 (694)
41 3v7d_B Cell division control p 100.0 3.1E-35 1.1E-39 223.9 27.5 201 2-220 131-383 (464)
42 3k26_A Polycomb protein EED; W 100.0 2.3E-35 8E-40 217.7 24.7 204 3-218 85-366 (366)
43 4e54_B DNA damage-binding prot 100.0 2E-36 6.8E-41 228.9 19.2 193 2-220 131-329 (435)
44 1sq9_A Antiviral protein SKI8; 100.0 1.9E-35 6.3E-40 220.8 24.1 219 1-220 135-397 (397)
45 4aez_A CDC20, WD repeat-contai 100.0 1.7E-34 5.7E-39 216.2 28.7 204 1-220 144-382 (401)
46 3jrp_A Fusion protein of prote 100.0 4.2E-35 1.4E-39 217.3 25.1 197 1-219 21-241 (379)
47 2j04_B YDR362CP, TAU91; beta p 100.0 5.8E-36 2E-40 229.9 20.0 204 3-219 277-518 (524)
48 1gxr_A ESG1, transducin-like e 100.0 3.1E-34 1.1E-38 209.5 28.4 189 1-220 107-298 (337)
49 3zwl_B Eukaryotic translation 100.0 7.2E-35 2.5E-39 215.2 23.5 201 1-220 42-251 (369)
50 2ymu_A WD-40 repeat protein; u 100.0 2.3E-34 7.7E-39 224.4 26.9 185 1-218 354-539 (577)
51 3ei3_B DNA damage-binding prot 100.0 3E-34 1E-38 213.5 26.3 192 1-220 83-284 (383)
52 3bg1_A Protein SEC13 homolog; 100.0 1.9E-35 6.6E-40 214.7 19.1 195 2-217 70-292 (316)
53 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-34 6E-39 216.2 24.3 193 2-220 93-301 (402)
54 1k8k_C P40, ARP2/3 complex 41 100.0 2.4E-34 8.4E-39 212.9 24.8 210 1-220 18-235 (372)
55 4ggc_A P55CDC, cell division c 100.0 6.2E-34 2.1E-38 206.5 25.8 198 4-219 37-316 (318)
56 3dm0_A Maltose-binding peripla 100.0 3.2E-34 1.1E-38 228.1 25.1 189 1-220 440-634 (694)
57 3lrv_A PRE-mRNA-splicing facto 100.0 6.7E-35 2.3E-39 214.2 19.7 187 2-220 47-246 (343)
58 1gxr_A ESG1, transducin-like e 100.0 1.2E-33 4.2E-38 206.3 26.2 185 1-217 151-336 (337)
59 2pm9_A Protein WEB1, protein t 100.0 2E-34 6.8E-39 216.3 22.1 205 1-220 77-339 (416)
60 2w18_A PALB2, fancn, partner a 100.0 1E-33 3.4E-38 202.8 24.2 191 2-217 144-356 (356)
61 3dw8_B Serine/threonine-protei 100.0 7.2E-34 2.5E-38 215.2 24.9 206 1-218 38-315 (447)
62 1r5m_A SIR4-interacting protei 100.0 1.6E-33 5.6E-38 211.6 26.4 202 1-220 55-321 (425)
63 1sq9_A Antiviral protein SKI8; 100.0 5.6E-34 1.9E-38 212.8 23.5 200 4-220 82-324 (397)
64 3mmy_A MRNA export factor; mRN 100.0 3E-34 1E-38 211.8 21.8 198 3-216 54-344 (368)
65 3jrp_A Fusion protein of prote 100.0 1E-33 3.4E-38 209.9 24.5 196 3-218 69-287 (379)
66 1r5m_A SIR4-interacting protei 100.0 3.1E-34 1.1E-38 215.5 21.9 217 1-218 159-425 (425)
67 3vl1_A 26S proteasome regulato 100.0 3E-34 1E-38 215.7 21.6 190 1-218 149-365 (420)
68 3mkq_A Coatomer beta'-subunit; 100.0 2.2E-33 7.6E-38 226.6 27.8 204 1-220 23-261 (814)
69 2oaj_A Protein SNI1; WD40 repe 100.0 1.6E-34 5.5E-39 234.8 21.2 213 1-220 27-244 (902)
70 2pm9_A Protein WEB1, protein t 100.0 1.4E-34 4.7E-39 217.2 18.6 206 1-220 175-416 (416)
71 2aq5_A Coronin-1A; WD40 repeat 100.0 5.3E-34 1.8E-38 213.6 21.4 190 6-220 50-256 (402)
72 3dwl_C Actin-related protein 2 100.0 1.6E-34 5.6E-39 214.4 18.0 203 1-217 65-280 (377)
73 3gre_A Serine/threonine-protei 100.0 6E-34 2E-38 215.3 21.4 207 1-220 121-361 (437)
74 3ei3_B DNA damage-binding prot 100.0 7E-33 2.4E-37 206.1 26.5 203 2-218 130-382 (383)
75 3i2n_A WD repeat-containing pr 100.0 5.8E-34 2E-38 209.7 20.2 211 1-220 127-355 (357)
76 1yfq_A Cell cycle arrest prote 100.0 5.4E-33 1.8E-37 203.6 24.2 212 1-220 21-284 (342)
77 4a11_B DNA excision repair pro 100.0 7.6E-33 2.6E-37 207.0 25.3 204 2-220 55-278 (408)
78 1k8k_C P40, ARP2/3 complex 41 100.0 5.7E-33 1.9E-37 205.5 24.1 201 1-218 62-274 (372)
79 3odt_A Protein DOA1; ubiquitin 100.0 3.2E-32 1.1E-36 197.0 27.5 198 1-220 27-257 (313)
80 3jro_A Fusion protein of prote 100.0 2.2E-33 7.5E-38 224.9 23.5 197 1-219 19-239 (753)
81 4gq1_A NUP37; propeller, trans 100.0 6.5E-34 2.2E-38 212.5 19.1 199 2-217 100-388 (393)
82 3odt_A Protein DOA1; ubiquitin 100.0 2.6E-32 8.9E-37 197.4 26.1 183 2-220 113-298 (313)
83 4a11_B DNA excision repair pro 100.0 1.3E-32 4.4E-37 205.8 25.3 217 2-220 111-367 (408)
84 3i2n_A WD repeat-containing pr 100.0 6.3E-33 2.1E-37 204.1 23.1 194 2-219 79-292 (357)
85 3gre_A Serine/threonine-protei 100.0 1.4E-33 4.8E-38 213.3 19.8 213 1-215 180-437 (437)
86 2xyi_A Probable histone-bindin 100.0 9.3E-33 3.2E-37 208.5 24.2 205 1-219 191-411 (430)
87 4gga_A P55CDC, cell division c 100.0 2.6E-32 8.9E-37 205.5 26.4 200 1-218 157-395 (420)
88 2xyi_A Probable histone-bindin 100.0 9.5E-33 3.3E-37 208.5 24.0 191 3-218 141-353 (430)
89 1p22_A F-BOX/WD-repeat protein 100.0 1.5E-32 5.1E-37 207.7 24.6 196 1-219 141-366 (435)
90 3dw8_B Serine/threonine-protei 100.0 4.2E-33 1.4E-37 211.0 21.5 214 1-220 103-375 (447)
91 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-32 3.7E-37 202.4 22.9 188 6-219 88-293 (343)
92 4aez_A CDC20, WD repeat-contai 100.0 2.8E-32 9.4E-37 204.2 25.3 188 2-220 102-295 (401)
93 1p22_A F-BOX/WD-repeat protein 100.0 1.3E-32 4.3E-37 208.1 23.4 204 2-219 182-415 (435)
94 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-32 5.7E-37 230.2 26.4 206 1-220 625-873 (1249)
95 2xzm_R RACK1; ribosome, transl 100.0 3.7E-32 1.3E-36 199.6 25.0 181 24-217 11-243 (343)
96 4e54_B DNA damage-binding prot 100.0 2E-33 6.7E-38 212.5 18.3 205 2-220 176-432 (435)
97 3zwl_B Eukaryotic translation 100.0 6.8E-32 2.3E-36 199.3 25.9 190 1-219 125-347 (369)
98 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.6E-32 1.9E-36 205.4 24.9 203 1-216 112-337 (450)
99 3v7d_B Cell division control p 100.0 8.4E-32 2.9E-36 205.0 25.9 183 5-220 175-423 (464)
100 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.2E-32 1.4E-36 205.7 24.1 183 1-219 127-309 (445)
101 3k26_A Polycomb protein EED; W 100.0 1.3E-32 4.3E-37 203.1 20.6 204 3-219 34-261 (366)
102 3sfz_A APAF-1, apoptotic pepti 100.0 8.2E-32 2.8E-36 226.0 27.6 202 1-218 667-913 (1249)
103 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.5E-32 1.9E-36 205.4 23.7 162 35-220 103-273 (450)
104 3jro_A Fusion protein of prote 100.0 3.7E-32 1.3E-36 217.9 23.3 196 3-218 67-285 (753)
105 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7E-31 2.4E-35 199.0 28.3 202 2-219 208-443 (445)
106 3vu4_A KMHSV2; beta-propeller 100.0 4.5E-31 1.5E-35 194.7 25.5 203 2-219 69-337 (355)
107 1pgu_A Actin interacting prote 100.0 9.1E-32 3.1E-36 210.9 22.0 188 1-220 28-240 (615)
108 4aow_A Guanine nucleotide-bind 100.0 8E-31 2.7E-35 191.8 24.6 199 7-220 8-248 (340)
109 1pgu_A Actin interacting prote 100.0 4.5E-31 1.5E-35 207.0 24.7 192 2-220 77-285 (615)
110 3vu4_A KMHSV2; beta-propeller 100.0 8.5E-31 2.9E-35 193.2 24.1 197 1-219 29-272 (355)
111 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-31 4.9E-36 217.6 19.7 202 3-216 364-659 (902)
112 3mkq_A Coatomer beta'-subunit; 100.0 2.1E-30 7.1E-35 209.3 25.1 201 1-218 65-302 (814)
113 4h5i_A Guanine nucleotide-exch 100.0 3.3E-31 1.1E-35 196.0 18.5 189 8-220 99-302 (365)
114 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-30 3.7E-35 191.2 20.4 188 28-219 5-250 (351)
115 3mmy_A MRNA export factor; mRN 100.0 9.7E-31 3.3E-35 193.0 19.6 184 23-220 28-306 (368)
116 2j04_A TAU60, YPL007P, hypothe 100.0 2.1E-30 7.1E-35 196.7 21.5 182 1-217 95-296 (588)
117 4gga_A P55CDC, cell division c 100.0 1.5E-29 5E-34 190.6 25.8 191 3-220 116-312 (420)
118 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-30 4.5E-35 197.7 15.4 177 1-220 25-213 (588)
119 1yfq_A Cell cycle arrest prote 100.0 2E-29 7E-34 184.5 18.7 175 3-210 112-315 (342)
120 4gq1_A NUP37; propeller, trans 100.0 1.3E-28 4.3E-33 184.0 22.6 203 4-220 31-288 (393)
121 1l0q_A Surface layer protein; 100.0 5.4E-27 1.9E-31 174.8 29.6 200 1-220 41-277 (391)
122 1l0q_A Surface layer protein; 100.0 2.1E-27 7E-32 177.0 26.8 185 3-220 2-191 (391)
123 3bws_A Protein LP49; two-domai 100.0 5.5E-27 1.9E-31 176.9 28.1 199 1-218 179-432 (433)
124 3bws_A Protein LP49; two-domai 100.0 1.4E-27 4.7E-32 180.2 21.2 189 1-220 132-336 (433)
125 2w18_A PALB2, fancn, partner a 100.0 8.4E-27 2.9E-31 167.1 23.3 192 5-220 56-316 (356)
126 4ggc_A P55CDC, cell division c 99.9 1.3E-25 4.5E-30 162.7 22.3 172 37-220 28-232 (318)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 5.6E-26 1.9E-30 171.4 19.8 195 1-219 46-279 (434)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 7.2E-25 2.5E-29 164.7 24.0 185 3-220 143-346 (415)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.8E-24 6E-29 162.6 23.8 186 1-220 188-389 (415)
130 1nir_A Nitrite reductase; hemo 99.9 3.4E-23 1.2E-27 160.2 24.1 201 1-221 147-358 (543)
131 1pby_B Quinohemoprotein amine 99.9 5.8E-22 2E-26 144.5 25.1 198 1-220 43-312 (337)
132 3u4y_A Uncharacterized protein 99.9 1.2E-21 4.1E-26 142.8 26.0 191 3-220 10-209 (331)
133 2oit_A Nucleoporin 214KDA; NH2 99.9 1.9E-22 6.4E-27 152.2 20.3 156 1-163 102-280 (434)
134 3vgz_A Uncharacterized protein 99.9 1.1E-21 3.7E-26 144.1 23.6 194 1-220 50-264 (353)
135 3u4y_A Uncharacterized protein 99.9 2.1E-21 7.3E-26 141.5 24.8 193 1-220 49-254 (331)
136 3vgz_A Uncharacterized protein 99.9 2.5E-21 8.4E-26 142.2 25.2 193 1-220 98-305 (353)
137 2ojh_A Uncharacterized protein 99.9 1.7E-22 5.7E-27 144.6 17.9 187 1-220 51-260 (297)
138 1jmx_B Amine dehydrogenase; ox 99.9 2.4E-21 8.1E-26 142.0 23.4 201 1-220 9-327 (349)
139 1nir_A Nitrite reductase; hemo 99.9 4.5E-21 1.5E-25 148.4 25.6 209 1-220 188-460 (543)
140 1pby_B Quinohemoprotein amine 99.9 2.6E-21 8.9E-26 141.1 22.8 198 4-220 2-271 (337)
141 1xfd_A DIP, dipeptidyl aminope 99.9 6.1E-23 2.1E-27 164.1 15.4 203 1-220 26-291 (723)
142 1ri6_A Putative isomerase YBHE 99.9 2.2E-21 7.4E-26 141.8 22.4 189 5-218 7-209 (343)
143 2ecf_A Dipeptidyl peptidase IV 99.9 1.9E-22 6.3E-27 161.7 18.0 198 1-220 46-323 (741)
144 3hfq_A Uncharacterized protein 99.9 9E-20 3.1E-24 133.8 27.3 206 1-220 49-321 (347)
145 1ri6_A Putative isomerase YBHE 99.9 2.1E-20 7.3E-25 136.5 23.4 199 1-217 47-261 (343)
146 2ojh_A Uncharacterized protein 99.9 6.6E-21 2.3E-25 136.3 18.7 179 8-217 17-203 (297)
147 2ecf_A Dipeptidyl peptidase IV 99.9 2.8E-21 9.5E-26 154.9 16.0 191 1-217 118-366 (741)
148 3o4h_A Acylamino-acid-releasin 99.9 1.1E-20 3.7E-25 147.8 18.5 184 1-220 31-229 (582)
149 2z3z_A Dipeptidyl aminopeptida 99.9 1.3E-20 4.3E-25 150.4 17.3 196 3-219 35-294 (706)
150 2z3z_A Dipeptidyl aminopeptida 99.9 2.6E-20 8.8E-25 148.6 18.0 192 1-217 91-341 (706)
151 1k32_A Tricorn protease; prote 99.9 1.7E-20 5.8E-25 155.5 17.4 183 1-217 306-501 (1045)
152 1k32_A Tricorn protease; prote 99.9 1.7E-20 6E-25 155.4 16.7 185 1-220 254-463 (1045)
153 1z68_A Fibroblast activation p 99.9 6.4E-21 2.2E-25 152.4 13.3 205 1-220 25-293 (719)
154 1xfd_A DIP, dipeptidyl aminope 99.9 1.2E-20 4.2E-25 150.8 14.9 191 1-215 70-341 (723)
155 3scy_A Hypothetical bacterial 99.9 2.7E-18 9.2E-23 126.6 26.3 200 1-217 59-290 (361)
156 3scy_A Hypothetical bacterial 99.9 7.1E-19 2.4E-23 129.7 22.6 197 2-220 108-341 (361)
157 1jof_A Carboxy-CIS,CIS-muconat 99.8 7.1E-19 2.4E-23 130.0 22.2 202 1-220 49-294 (365)
158 3hfq_A Uncharacterized protein 99.8 2.7E-18 9.3E-23 125.9 24.4 200 5-218 4-218 (347)
159 3o4h_A Acylamino-acid-releasin 99.8 7.7E-20 2.6E-24 143.0 15.4 180 1-216 74-274 (582)
160 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.7E-18 1.3E-22 126.2 23.6 193 11-219 117-342 (365)
161 3no2_A Uncharacterized protein 99.8 2E-17 6.9E-22 117.6 21.2 191 2-220 4-197 (276)
162 3pe7_A Oligogalacturonate lyas 99.8 1.4E-17 4.8E-22 123.8 19.9 191 1-220 45-275 (388)
163 4a5s_A Dipeptidyl peptidase 4 99.8 1.6E-18 5.3E-23 139.1 15.6 204 1-220 26-296 (740)
164 1z68_A Fibroblast activation p 99.8 1.6E-19 5.6E-24 144.3 9.8 198 1-219 69-347 (719)
165 2oiz_A Aromatic amine dehydrog 99.8 8E-17 2.7E-21 118.9 23.2 108 2-112 14-146 (361)
166 3fvz_A Peptidyl-glycine alpha- 99.8 2.1E-17 7.1E-22 120.5 19.9 194 1-218 100-322 (329)
167 3azo_A Aminopeptidase; POP fam 99.8 1.7E-17 5.9E-22 131.5 17.9 198 1-219 88-326 (662)
168 1q7f_A NHL, brain tumor CG1071 99.8 5.8E-16 2E-20 110.6 22.5 189 1-218 39-238 (286)
169 4a5s_A Dipeptidyl peptidase 4 99.8 2.8E-17 9.7E-22 131.9 17.2 206 1-220 71-355 (740)
170 3fvz_A Peptidyl-glycine alpha- 99.8 5.2E-16 1.8E-20 113.1 22.0 202 1-220 33-279 (329)
171 1q7f_A NHL, brain tumor CG1071 99.8 7.2E-16 2.5E-20 110.1 22.4 187 2-218 88-280 (286)
172 3dsm_A Uncharacterized protein 99.7 3.2E-15 1.1E-19 108.9 23.2 186 3-221 54-256 (328)
173 3azo_A Aminopeptidase; POP fam 99.7 1.4E-16 4.8E-21 126.3 16.8 187 4-219 36-275 (662)
174 1jmx_B Amine dehydrogenase; ox 99.7 5E-16 1.7E-20 113.7 18.2 150 1-169 101-333 (349)
175 1xip_A Nucleoporin NUP159; bet 99.7 8.1E-16 2.8E-20 113.3 18.5 172 2-205 48-231 (388)
176 2dg1_A DRP35, lactonase; beta 99.7 3E-14 1E-18 103.8 26.2 195 1-218 54-263 (333)
177 3pe7_A Oligogalacturonate lyas 99.7 4.1E-16 1.4E-20 115.9 16.3 193 1-220 90-331 (388)
178 3e5z_A Putative gluconolactona 99.7 1.1E-14 3.6E-19 104.6 23.0 184 1-217 37-245 (296)
179 3c5m_A Oligogalacturonate lyas 99.7 2.1E-16 7.2E-21 117.6 12.7 190 1-220 45-275 (396)
180 1rwi_B Serine/threonine-protei 99.7 6.2E-15 2.1E-19 104.3 19.4 189 1-220 76-266 (270)
181 2gop_A Trilobed protease; beta 99.7 5.3E-15 1.8E-19 108.3 19.4 176 1-219 68-292 (347)
182 2xdw_A Prolyl endopeptidase; a 99.7 1.6E-14 5.5E-19 115.5 23.1 203 1-220 134-416 (710)
183 3dsm_A Uncharacterized protein 99.7 2.2E-14 7.7E-19 104.5 21.4 189 1-220 93-303 (328)
184 1rwi_B Serine/threonine-protei 99.7 6.2E-15 2.1E-19 104.3 18.0 190 1-219 33-223 (270)
185 1qks_A Cytochrome CD1 nitrite 99.7 1E-13 3.5E-18 107.6 25.7 199 3-221 167-376 (567)
186 3c5m_A Oligogalacturonate lyas 99.7 2.2E-15 7.4E-20 112.1 15.6 186 1-220 90-331 (396)
187 2dg1_A DRP35, lactonase; beta 99.7 1.7E-14 5.8E-19 105.1 18.8 184 3-217 17-212 (333)
188 3e5z_A Putative gluconolactona 99.6 1.7E-13 5.7E-18 98.3 21.4 187 1-221 78-289 (296)
189 2mad_H Methylamine dehydrogena 99.6 2.4E-12 8.2E-17 95.2 25.9 108 1-112 30-162 (373)
190 3no2_A Uncharacterized protein 99.6 5.8E-14 2E-18 99.7 16.6 152 43-220 3-156 (276)
191 2oiz_A Aromatic amine dehydrog 99.6 8.7E-14 3E-18 102.6 18.1 69 1-70 59-146 (361)
192 2hz6_A Endoplasmic reticulum t 99.6 4.7E-16 1.6E-20 115.0 4.5 181 2-220 8-194 (369)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.8E-12 6.2E-17 93.5 22.9 192 1-220 27-258 (314)
194 1xip_A Nucleoporin NUP159; bet 99.6 7.7E-14 2.6E-18 102.8 15.6 143 36-219 39-192 (388)
195 3sjl_D Methylamine dehydrogena 99.6 1.8E-12 6.1E-17 95.3 22.6 111 1-114 42-177 (386)
196 2gop_A Trilobed protease; beta 99.6 2.5E-13 8.5E-18 99.5 17.9 162 13-217 152-330 (347)
197 2z2n_A Virginiamycin B lyase; 99.6 2.6E-12 8.8E-17 91.9 22.4 185 1-219 24-213 (299)
198 2bkl_A Prolyl endopeptidase; m 99.6 1.1E-13 3.9E-18 110.4 16.7 185 1-217 130-348 (695)
199 2bkl_A Prolyl endopeptidase; m 99.6 2.2E-13 7.6E-18 108.7 17.9 191 1-219 77-305 (695)
200 3g4e_A Regucalcin; six bladed 99.6 1.3E-11 4.5E-16 88.6 25.5 192 2-220 24-231 (297)
201 1yr2_A Prolyl oligopeptidase; 99.6 3.7E-13 1.3E-17 108.2 19.2 203 1-220 172-443 (741)
202 3c75_H MADH, methylamine dehyd 99.6 3.6E-12 1.2E-16 95.2 22.4 111 1-114 82-217 (426)
203 2z2n_A Virginiamycin B lyase; 99.5 1.4E-11 4.9E-16 88.0 23.3 185 1-217 66-254 (299)
204 2xdw_A Prolyl endopeptidase; a 99.5 1.5E-12 5E-17 104.3 19.4 159 35-219 125-321 (710)
205 3hrp_A Uncharacterized protein 99.5 7.4E-12 2.5E-16 93.8 21.7 205 1-220 140-356 (409)
206 3hrp_A Uncharacterized protein 99.5 1.6E-11 5.3E-16 92.1 22.8 213 1-217 180-409 (409)
207 1qks_A Cytochrome CD1 nitrite 99.5 1.4E-10 4.8E-15 90.1 27.7 194 1-218 206-421 (567)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 5E-11 1.7E-15 85.9 23.3 188 3-218 83-299 (314)
209 3g4e_A Regucalcin; six bladed 99.5 6.2E-11 2.1E-15 85.0 23.0 180 1-206 63-260 (297)
210 2qc5_A Streptogramin B lactona 99.5 5E-11 1.7E-15 85.2 22.4 185 1-216 29-216 (300)
211 2qc5_A Streptogramin B lactona 99.5 6.3E-11 2.1E-15 84.7 22.4 187 1-217 71-259 (300)
212 2ghs_A AGR_C_1268P; regucalcin 99.5 2.2E-10 7.6E-15 83.3 25.3 185 3-217 61-259 (326)
213 3dr2_A Exported gluconolactona 99.4 1.8E-10 6.1E-15 83.0 22.6 143 1-163 54-226 (305)
214 1yr2_A Prolyl oligopeptidase; 99.4 2.3E-11 7.8E-16 97.8 17.9 191 1-218 116-350 (741)
215 2ece_A 462AA long hypothetical 99.4 1.8E-10 6.1E-15 85.7 21.1 202 5-217 98-351 (462)
216 2iwa_A Glutamine cyclotransfer 99.4 4.7E-10 1.6E-14 78.5 22.0 203 2-218 31-237 (266)
217 1mda_H Methylamine dehydrogena 99.4 2.1E-10 7.1E-15 84.4 19.8 99 5-106 34-158 (368)
218 2qe8_A Uncharacterized protein 99.4 5.8E-11 2E-15 87.0 16.5 212 1-219 26-279 (343)
219 3nol_A Glutamine cyclotransfer 99.4 8.2E-10 2.8E-14 76.5 21.0 190 2-207 52-244 (262)
220 2ece_A 462AA long hypothetical 99.3 6.1E-10 2.1E-14 82.9 20.7 204 1-206 147-399 (462)
221 3iuj_A Prolyl endopeptidase; h 99.3 1.3E-10 4.4E-15 92.8 18.0 185 1-219 138-360 (693)
222 3nok_A Glutaminyl cyclase; bet 99.3 7.3E-10 2.5E-14 76.8 19.2 189 3-207 65-254 (268)
223 2ghs_A AGR_C_1268P; regucalcin 99.3 1.7E-09 5.7E-14 78.7 20.9 175 1-206 99-290 (326)
224 1kb0_A Quinohemoprotein alcoho 99.3 5.1E-10 1.8E-14 89.0 19.5 193 12-221 189-510 (677)
225 1yiq_A Quinohemoprotein alcoho 99.3 7.3E-10 2.5E-14 88.3 19.6 193 12-221 182-508 (689)
226 3dr2_A Exported gluconolactona 99.3 1.1E-09 3.6E-14 78.9 18.5 181 1-216 95-304 (305)
227 3mbr_X Glutamine cyclotransfer 99.3 2.2E-08 7.6E-13 68.8 22.8 190 3-207 31-223 (243)
228 1kb0_A Quinohemoprotein alcoho 99.3 1E-09 3.6E-14 87.2 18.5 164 3-171 128-356 (677)
229 2qe8_A Uncharacterized protein 99.2 1.8E-09 6.1E-14 79.1 18.0 188 1-208 76-311 (343)
230 3nok_A Glutaminyl cyclase; bet 99.2 7.8E-09 2.7E-13 71.7 19.0 166 25-221 44-213 (268)
231 2hz6_A Endoplasmic reticulum t 99.2 1.3E-12 4.4E-17 96.6 -0.1 145 44-221 8-152 (369)
232 1yiq_A Quinohemoprotein alcoho 99.2 4.9E-09 1.7E-13 83.6 20.1 163 3-170 121-347 (689)
233 3q7m_A Lipoprotein YFGL, BAMB; 99.2 3.3E-08 1.1E-12 73.2 22.9 154 3-169 53-215 (376)
234 3nol_A Glutamine cyclotransfer 99.2 1.6E-08 5.5E-13 70.1 18.5 168 25-221 32-204 (262)
235 1fwx_A Nitrous oxide reductase 99.1 1.7E-08 5.7E-13 77.8 19.9 209 1-218 99-361 (595)
236 3sjl_D Methylamine dehydrogena 99.1 3.8E-09 1.3E-13 77.8 15.7 108 54-169 58-177 (386)
237 2iwa_A Glutamine cyclotransfer 99.1 7.8E-08 2.7E-12 67.3 21.5 170 24-221 9-184 (266)
238 3iuj_A Prolyl endopeptidase; h 99.1 1.6E-08 5.3E-13 80.9 19.3 188 2-220 184-407 (693)
239 1fwx_A Nitrous oxide reductase 99.1 3.3E-09 1.1E-13 81.6 14.6 206 1-221 145-434 (595)
240 3q7m_A Lipoprotein YFGL, BAMB; 99.1 9.2E-08 3.1E-12 70.8 22.0 189 3-220 103-298 (376)
241 1npe_A Nidogen, entactin; glyc 99.1 5.3E-07 1.8E-11 63.5 25.0 188 3-219 1-199 (267)
242 3hxj_A Pyrrolo-quinoline quino 99.1 1.1E-08 3.6E-13 74.2 16.2 175 4-216 108-282 (330)
243 2mad_H Methylamine dehydrogena 99.1 2.1E-08 7.3E-13 74.2 17.4 103 56-167 48-162 (373)
244 3mbr_X Glutamine cyclotransfer 99.1 1.8E-07 6.2E-12 64.3 20.2 168 25-221 10-182 (243)
245 3hxj_A Pyrrolo-quinoline quino 99.0 3.9E-08 1.3E-12 71.2 17.1 177 4-218 148-324 (330)
246 1npe_A Nidogen, entactin; glyc 99.0 1.3E-06 4.6E-11 61.4 23.6 186 4-220 49-240 (267)
247 2fp8_A Strictosidine synthase; 99.0 9E-07 3.1E-11 64.1 22.7 184 1-217 28-268 (322)
248 3c75_H MADH, methylamine dehyd 99.0 2.1E-08 7.3E-13 75.0 13.3 142 55-212 99-252 (426)
249 1kv9_A Type II quinohemoprotei 98.9 2.2E-07 7.5E-12 74.0 19.6 192 12-220 177-490 (668)
250 1kv9_A Type II quinohemoprotei 98.9 1.6E-07 5.6E-12 74.7 18.3 163 3-170 117-342 (668)
251 2ad6_A Methanol dehydrogenase 98.9 6.9E-07 2.4E-11 69.8 19.6 150 56-221 273-497 (571)
252 1w6s_A Methanol dehydrogenase 98.8 2.4E-06 8.1E-11 67.0 19.5 104 11-115 180-351 (599)
253 1w6s_A Methanol dehydrogenase 98.8 3.1E-06 1E-10 66.4 19.6 159 6-170 124-351 (599)
254 2ad6_A Methanol dehydrogenase 98.7 3.5E-06 1.2E-10 65.9 19.6 163 3-171 115-345 (571)
255 3amr_A 3-phytase; beta-propell 98.7 2.1E-05 7.2E-10 57.0 22.3 190 3-217 40-262 (355)
256 1flg_A Protein (quinoprotein e 98.7 1.6E-06 5.4E-11 67.9 17.2 61 55-116 291-365 (582)
257 2fp8_A Strictosidine synthase; 98.7 2.9E-05 1E-09 56.1 22.5 184 5-218 93-313 (322)
258 4hw6_A Hypothetical protein, I 98.6 6.1E-05 2.1E-09 56.9 23.2 199 4-216 153-372 (433)
259 1flg_A Protein (quinoprotein e 98.6 9.7E-06 3.3E-10 63.5 19.2 164 3-171 117-365 (582)
260 3tc9_A Hypothetical hydrolase; 98.6 7.1E-05 2.4E-09 56.5 23.7 143 3-161 149-301 (430)
261 3v65_B Low-density lipoprotein 98.6 6.8E-05 2.3E-09 55.7 22.4 178 11-218 94-277 (386)
262 1k3i_A Galactose oxidase precu 98.6 2.5E-05 8.5E-10 62.2 21.0 109 2-110 197-327 (656)
263 1mda_H Methylamine dehydrogena 98.6 3.5E-07 1.2E-11 67.3 9.3 106 48-161 35-158 (368)
264 1ijq_A LDL receptor, low-densi 98.5 8.3E-05 2.8E-09 53.7 24.9 182 6-218 4-195 (316)
265 2p4o_A Hypothetical protein; p 98.5 8.3E-05 2.8E-09 53.4 22.2 195 1-217 41-241 (306)
266 3v65_B Low-density lipoprotein 98.5 0.00011 3.9E-09 54.5 22.5 184 6-219 131-319 (386)
267 3v64_C Agrin; beta propeller, 98.5 0.0001 3.5E-09 54.0 23.9 178 11-218 51-234 (349)
268 3v64_C Agrin; beta propeller, 98.5 0.00011 3.8E-09 53.8 22.8 179 11-219 93-276 (349)
269 3p5b_L Low density lipoprotein 98.5 0.00015 5.2E-09 54.1 24.9 179 11-219 90-278 (400)
270 2xe4_A Oligopeptidase B; hydro 98.5 1.8E-05 6.3E-10 63.9 17.6 103 1-107 184-305 (751)
271 3tc9_A Hypothetical hydrolase; 98.4 5.8E-05 2E-09 57.0 17.6 154 36-217 138-300 (430)
272 4a2l_A BT_4663, two-component 98.4 0.00023 7.8E-09 58.0 21.9 190 6-219 323-527 (795)
273 2p9w_A MAL S 1 allergenic prot 98.4 7.6E-05 2.6E-09 53.7 16.4 174 33-217 11-214 (334)
274 2xzh_A Clathrin heavy chain 1; 98.3 0.00028 9.7E-09 50.5 22.4 198 1-220 76-292 (365)
275 3qqz_A Putative uncharacterize 98.3 0.00023 8E-09 49.5 23.6 199 4-218 40-253 (255)
276 3sov_A LRP-6, low-density lipo 98.3 0.00033 1.1E-08 50.6 23.5 180 11-218 11-197 (318)
277 2xe4_A Oligopeptidase B; hydro 98.3 2.8E-05 9.5E-10 62.9 14.9 114 36-162 175-305 (751)
278 4a2l_A BT_4663, two-component 98.3 0.00079 2.7E-08 54.9 23.0 190 5-219 369-572 (795)
279 3v9f_A Two-component system se 98.3 0.00026 8.8E-09 57.6 19.8 191 5-220 375-570 (781)
280 1ijq_A LDL receptor, low-densi 98.3 0.00046 1.6E-08 49.8 24.5 189 5-220 44-240 (316)
281 3pbp_A Nucleoporin NUP82; beta 98.2 0.00012 4E-09 54.4 15.4 157 45-213 32-207 (452)
282 3sov_A LRP-6, low-density lipo 98.2 0.00053 1.8E-08 49.5 24.3 182 10-220 54-240 (318)
283 4hw6_A Hypothetical protein, I 98.2 0.00028 9.5E-09 53.3 17.8 155 36-217 140-303 (433)
284 2p4o_A Hypothetical protein; p 98.2 0.00073 2.5E-08 48.4 19.8 178 1-207 81-277 (306)
285 3qqz_A Putative uncharacterize 98.2 0.00064 2.2E-08 47.3 18.9 175 31-218 23-204 (255)
286 1bpo_A Protein (clathrin); cla 98.1 0.0013 4.5E-08 49.1 22.7 198 1-220 75-291 (494)
287 3v9f_A Two-component system se 98.1 0.0014 4.9E-08 53.3 20.6 187 6-219 326-525 (781)
288 2p9w_A MAL S 1 allergenic prot 98.1 0.00051 1.7E-08 49.5 15.8 150 3-161 25-215 (334)
289 3pbp_A Nucleoporin NUP82; beta 98.1 0.00036 1.2E-08 51.9 14.8 150 3-157 32-208 (452)
290 3m0c_C LDL receptor, low-densi 98.1 0.0031 1E-07 51.3 24.7 178 11-218 402-589 (791)
291 3amr_A 3-phytase; beta-propell 98.0 0.0019 6.5E-08 46.9 16.7 147 12-170 98-273 (355)
292 1n7d_A LDL receptor, low-densi 97.9 0.0001 3.6E-09 59.0 11.1 157 37-220 455-616 (699)
293 1k3i_A Galactose oxidase precu 97.9 0.00016 5.4E-09 57.6 11.9 182 1-207 296-530 (656)
294 1n7d_A LDL receptor, low-densi 97.9 6.9E-05 2.4E-09 60.1 9.7 178 11-218 384-571 (699)
295 3kya_A Putative phosphatase; s 97.9 0.0042 1.5E-07 47.5 22.5 154 4-160 153-340 (496)
296 3kya_A Putative phosphatase; s 97.9 0.004 1.4E-07 47.7 18.1 169 37-216 141-339 (496)
297 3p5b_L Low density lipoprotein 97.9 0.0044 1.5E-07 46.3 24.7 158 35-219 159-321 (400)
298 2vpj_A Kelch-like protein 12; 97.8 0.0033 1.1E-07 44.8 16.9 187 2-219 62-279 (301)
299 4a0p_A LRP6, LRP-6, low-densit 97.8 0.0069 2.4E-07 48.0 24.2 179 11-219 13-198 (628)
300 3ii7_A Kelch-like protein 7; p 97.8 0.0043 1.5E-07 44.3 17.2 186 2-219 55-273 (306)
301 3sre_A PON1, serum paraoxonase 97.8 0.0059 2E-07 44.7 19.4 155 36-217 51-251 (355)
302 3m0c_C LDL receptor, low-densi 97.7 0.012 4E-07 48.0 24.7 159 34-219 470-633 (791)
303 2xbg_A YCF48-like protein; pho 97.7 0.0056 1.9E-07 44.3 18.6 159 33-216 161-320 (327)
304 3sre_A PON1, serum paraoxonase 97.7 0.0065 2.2E-07 44.5 22.9 167 11-206 81-285 (355)
305 3s94_A LRP-6, low-density lipo 97.7 0.013 4.5E-07 46.4 21.5 180 11-218 16-202 (619)
306 2xn4_A Kelch-like protein 2; s 97.6 0.0074 2.5E-07 43.0 16.4 186 2-219 61-277 (302)
307 3s94_A LRP-6, low-density lipo 97.6 0.015 5.2E-07 46.0 21.1 180 12-220 61-245 (619)
308 2vpj_A Kelch-like protein 12; 97.6 0.01 3.5E-07 42.2 17.5 186 2-219 14-232 (301)
309 1tl2_A L10, protein (tachylect 97.5 0.0084 2.9E-07 40.6 15.3 185 3-212 4-204 (236)
310 1xi4_A Clathrin heavy chain; a 97.5 0.0069 2.4E-07 52.0 15.2 198 1-220 75-291 (1630)
311 2be1_A Serine/threonine-protei 97.5 0.0029 9.9E-08 46.0 11.6 110 3-114 10-138 (339)
312 4a0p_A LRP6, LRP-6, low-densit 97.4 0.028 9.7E-07 44.6 24.2 182 6-219 52-238 (628)
313 2ism_A Putative oxidoreductase 97.4 0.018 6.2E-07 42.2 18.0 108 33-149 29-153 (352)
314 2xn4_A Kelch-like protein 2; s 97.4 0.02 6.7E-07 40.8 15.5 185 3-219 16-230 (302)
315 4asc_A Kelch repeat and BTB do 97.3 0.015 5.1E-07 41.7 13.4 105 44-163 98-223 (315)
316 1zgk_A Kelch-like ECH-associat 97.3 0.026 9E-07 40.3 16.1 146 44-219 121-288 (308)
317 3a9g_A Putative uncharacterize 97.2 0.036 1.2E-06 40.7 17.7 115 29-150 23-154 (354)
318 3ii7_A Kelch-like protein 7; p 97.2 0.033 1.1E-06 39.7 16.3 104 3-109 12-130 (306)
319 1zgk_A Kelch-like ECH-associat 97.1 0.036 1.2E-06 39.6 15.5 186 2-219 24-241 (308)
320 2xbg_A YCF48-like protein; pho 97.1 0.046 1.6E-06 39.5 21.7 147 35-211 122-272 (327)
321 2uvk_A YJHT; unknown function, 97.0 0.049 1.7E-06 39.7 14.6 95 2-96 19-128 (357)
322 1tl2_A L10, protein (tachylect 97.0 0.036 1.2E-06 37.6 12.4 119 76-217 41-162 (236)
323 2ism_A Putative oxidoreductase 96.9 0.066 2.2E-06 39.2 18.9 92 1-94 40-153 (352)
324 2uvk_A YJHT; unknown function, 96.9 0.068 2.3E-06 39.0 14.0 25 197-221 315-345 (357)
325 3ei3_A DNA damage-binding prot 96.7 0.22 7.7E-06 42.5 20.7 175 13-218 807-999 (1158)
326 2g8s_A Glucose/sorbosone dehyd 96.7 0.098 3.3E-06 38.3 17.1 52 34-86 17-76 (353)
327 2woz_A Kelch repeat and BTB do 96.6 0.12 4E-06 37.0 16.0 64 44-109 109-187 (318)
328 3ei3_A DNA damage-binding prot 96.6 0.3 1E-05 41.8 23.4 142 4-161 845-999 (1158)
329 2woz_A Kelch repeat and BTB do 96.3 0.17 5.8E-06 36.2 15.9 143 4-163 17-186 (318)
330 3das_A Putative oxidoreductase 96.3 0.19 6.6E-06 36.7 18.5 120 28-150 25-159 (347)
331 3a9g_A Putative uncharacterize 96.2 0.22 7.5E-06 36.5 18.8 91 1-94 38-153 (354)
332 2xzh_A Clathrin heavy chain 1; 96.1 0.24 8.3E-06 35.9 20.6 160 5-171 119-300 (365)
333 3sbq_A Nitrous-oxide reductase 96.1 0.0088 3E-07 46.2 5.1 87 75-162 322-409 (638)
334 1cru_A Protein (soluble quinop 96.1 0.33 1.1E-05 36.9 21.6 53 34-86 26-87 (454)
335 2zwa_A Leucine carboxyl methyl 96.0 0.46 1.6E-05 38.3 19.5 200 2-219 397-636 (695)
336 4asc_A Kelch repeat and BTB do 96.0 0.26 8.8E-06 35.2 18.0 183 5-219 7-222 (315)
337 4gq2_M Nucleoporin NUP120; bet 95.7 0.62 2.1E-05 39.1 14.9 39 77-115 237-275 (950)
338 2be1_A Serine/threonine-protei 95.5 0.081 2.8E-06 38.5 8.1 123 45-169 10-138 (339)
339 1cru_A Protein (soluble quinop 95.5 0.57 2E-05 35.6 13.9 119 77-206 28-162 (454)
340 1bpo_A Protein (clathrin); cla 95.5 0.57 2E-05 35.4 22.3 159 5-170 118-298 (494)
341 3ott_A Two-component system se 95.3 0.97 3.3E-05 36.7 22.5 182 5-219 75-261 (758)
342 4gq2_M Nucleoporin NUP120; bet 95.2 1.2 4.2E-05 37.3 15.8 39 132-170 237-275 (950)
343 3das_A Putative oxidoreductase 94.9 0.76 2.6E-05 33.6 13.5 120 76-206 32-158 (347)
344 1xi4_A Clathrin heavy chain; a 94.4 2.1 7.2E-05 37.7 14.2 155 12-169 124-297 (1630)
345 2g8s_A Glucose/sorbosone dehyd 94.1 1.2 4.1E-05 32.5 22.3 92 1-94 27-148 (353)
346 2wg3_C Hedgehog-interacting pr 93.1 2.2 7.6E-05 32.5 13.6 116 34-152 13-160 (463)
347 2wg3_C Hedgehog-interacting pr 93.0 1.6 5.5E-05 33.3 10.7 29 77-105 15-44 (463)
348 3s25_A Hypothetical 7-bladed b 92.0 2.4 8.3E-05 30.2 15.4 86 55-163 88-178 (302)
349 2zwa_A Leucine carboxyl methyl 91.0 5.3 0.00018 32.3 16.2 155 44-220 397-579 (695)
350 3f7f_A Nucleoporin NUP120; nuc 90.9 3.7 0.00013 33.2 10.6 36 78-115 224-259 (729)
351 3sbq_A Nitrous-oxide reductase 90.7 1.4 4.7E-05 34.6 7.8 90 15-106 300-408 (638)
352 4fhn_B Nucleoporin NUP120; pro 90.5 1.5 5.3E-05 37.6 8.8 39 77-115 239-277 (1139)
353 3f7f_A Nucleoporin NUP120; nuc 90.4 2 6.7E-05 34.7 8.7 30 189-220 223-252 (729)
354 4fhn_B Nucleoporin NUP120; pro 90.0 8.7 0.0003 33.1 15.3 32 189-220 239-270 (1139)
355 3ott_A Two-component system se 90.0 6.7 0.00023 31.8 24.0 175 6-209 115-299 (758)
356 3qhy_B Beta-lactamase inhibito 90.0 3.8 0.00013 28.8 13.6 88 12-105 41-128 (282)
357 3qhy_B Beta-lactamase inhibito 89.9 3.8 0.00013 28.8 14.5 129 12-162 80-208 (282)
358 3uc1_A DNA gyrase subunit A; D 85.0 8.9 0.00031 27.7 17.1 102 2-105 108-227 (327)
359 3zwu_A Alkaline phosphatase PH 84.1 10 0.00035 30.0 9.4 60 132-205 477-548 (592)
360 1suu_A DNA gyrase subunit A; t 83.9 9.8 0.00034 27.2 20.8 201 1-217 6-230 (312)
361 4a9v_A PHOX; hydrolase, beta-p 83.2 12 0.00042 29.5 9.3 62 131-206 476-549 (592)
362 3no0_A DNA gyrase subunit A; D 82.6 10 0.00035 26.6 14.7 149 3-160 80-245 (276)
363 4a9v_A PHOX; hydrolase, beta-p 76.6 19 0.00065 28.5 8.4 58 36-93 477-548 (592)
364 3s25_A Hypothetical 7-bladed b 75.7 19 0.00065 25.6 18.9 64 41-109 110-179 (302)
365 3zwu_A Alkaline phosphatase PH 75.6 13 0.00046 29.4 7.5 57 37-93 478-548 (592)
366 3q6k_A 43.2 kDa salivary prote 73.9 25 0.00085 26.1 20.1 157 56-218 124-306 (381)
367 3no0_A DNA gyrase subunit A; D 68.6 27 0.00094 24.4 14.1 121 34-160 67-195 (276)
368 1wp5_A Topoisomerase IV; broke 65.1 36 0.0012 24.5 19.0 202 1-217 3-224 (323)
369 1zi0_A DNA gyrase subunit A; b 62.1 40 0.0014 24.0 20.5 199 1-216 1-224 (307)
370 3b7f_A Glycosyl hydrolase, BNR 59.2 50 0.0017 24.2 19.9 97 4-102 23-143 (394)
371 1q47_A Semaphorin 3A; beta pro 54.5 56 0.0019 25.2 7.2 27 187-213 461-487 (495)
372 4gz8_A Semaphorin-3A; multi-do 53.0 43 0.0015 27.1 6.5 28 186-213 468-495 (667)
373 3uc1_A DNA gyrase subunit A; D 52.7 62 0.0021 23.3 17.9 120 35-160 95-227 (327)
374 3al9_A Plexin-A2; beta-propell 50.9 88 0.003 24.5 8.4 72 132-213 401-476 (539)
375 3kci_A Probable E3 ubiquitin-p 49.2 76 0.0026 23.3 16.8 204 5-216 12-239 (389)
376 1zvt_A Topoisomerase IV subuni 46.7 69 0.0024 22.1 11.9 150 3-161 2-163 (256)
377 3b7f_A Glycosyl hydrolase, BNR 45.4 87 0.003 22.9 13.8 51 45-97 22-77 (394)
378 1q47_A Semaphorin 3A; beta pro 42.8 1.2E+02 0.0039 23.6 7.5 66 36-101 405-487 (495)
379 2zux_A YESW protein; beta-prop 42.3 1.3E+02 0.0044 23.9 11.6 60 56-116 152-248 (591)
380 3al9_A Plexin-A2; beta-propell 41.3 1.3E+02 0.0044 23.6 7.7 67 35-101 400-476 (539)
381 1suu_A DNA gyrase subunit A; t 40.7 97 0.0033 22.1 19.0 111 45-161 114-231 (312)
382 3oky_B Putative uncharacterize 38.2 1.2E+02 0.0041 24.0 6.8 27 187-213 469-495 (565)
383 3q6k_A 43.2 kDa salivary prote 37.9 1.2E+02 0.0042 22.5 22.1 168 14-206 124-342 (381)
384 3mez_B Mannose-specific lectin 35.6 67 0.0023 18.8 8.8 17 4-20 25-41 (113)
385 3nvq_A Semaphorin-7A; beta-pro 35.5 1.5E+02 0.0051 23.6 7.0 54 48-101 383-444 (590)
386 4gz8_A Semaphorin-3A; multi-do 27.6 1.9E+02 0.0066 23.4 6.5 54 48-101 432-495 (667)
387 1olz_A Semaphorin 4D; developm 26.5 2.6E+02 0.0088 22.7 7.3 54 48-101 418-477 (663)
388 3kci_A Probable E3 ubiquitin-p 26.5 1.9E+02 0.0065 21.2 16.8 98 6-104 119-239 (389)
389 3nvq_A Semaphorin-7A; beta-pro 25.2 2.6E+02 0.0089 22.3 8.3 27 187-213 418-444 (590)
390 4h3o_A Lectin; cadmium, plant 24.9 1.1E+02 0.0036 17.6 9.6 23 80-104 54-76 (105)
391 4d9s_A UVB-resistance protein 22.8 2.3E+02 0.008 20.9 19.9 150 6-161 28-201 (406)
392 3mwp_A Nucleoprotein; structur 22.0 26 0.00089 26.4 0.7 18 50-67 162-179 (577)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.4e-42 Score=251.61 Aligned_cols=200 Identities=22% Similarity=0.268 Sum_probs=168.1
Q ss_pred ceEEEEeCCCeEEEEEecCCceee----EEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEAL----AVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDK 78 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~----~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v 78 (221)
+.|++|+.||.|+|||+. +++.+ ..+.+|.+.|++++|+|+ .+|++++.|++|++||+++++++..+.+|...|
T Consensus 94 ~~l~~~s~dg~v~lWd~~-~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V 172 (344)
T 4gqb_B 94 RGILVASDSGAVELWELD-ENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQV 172 (344)
T ss_dssp TEEEEEETTSEEEEEEEC-TTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CeEEEEECCCEEEEEecc-CCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCce
Confidence 568899999999999998 44333 234579999999999985 569999999999999999999999999999999
Q ss_pred eEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEE--------------------------------eecccceeEee
Q psy10662 79 NFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYR--------------------------------FDTVRSMLESS 125 (221)
Q Consensus 79 ~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------~~~~~~~~~~~ 125 (221)
.+++|+|++. ++++++.|+.|++||+++++....+. |+......+..
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~ 252 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLS 252 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEE
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEE
Confidence 9999999885 78999999999999999887665442 45555666677
Q ss_pred EEEeeCceEEEEEecCC-CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEE
Q psy10662 126 FVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLV 203 (221)
Q Consensus 126 ~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 203 (221)
+.+|...|++++|+|++ ++|++|+.|+.|++||+++++... ..+|...|++++|+|+++ +|+
T Consensus 253 ~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~----------------~~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 253 SAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR----------------SQAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE----------------ECCCSSCEEEEEECSSSTTEEE
T ss_pred EcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE----------------EcCCCCCEEEEEEeCCCCeEEE
Confidence 88999999999999998 579999999999999998765321 237899999999999986 567
Q ss_pred EecCCCeEEEEECCccc
Q psy10662 204 AANSQGIIKIYVIPIRV 220 (221)
Q Consensus 204 ~~~~dg~i~iw~~~~~~ 220 (221)
+++.|++|++|++++..
T Consensus 317 s~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 317 TVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEETTSCEEEEECCC--
T ss_pred EEcCCCeEEEEECCCCC
Confidence 89999999999998764
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-41 Score=253.79 Aligned_cols=204 Identities=15% Similarity=0.311 Sum_probs=182.7
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++.+|++|+.||.|++||+. +++....+.+|.+.|.+++|+|+ ..|++|+.|++|++||+.+++++..+.+|...|.
T Consensus 118 p~~~~l~s~s~Dg~i~vwd~~-~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~ 196 (410)
T 1vyh_C 118 PVFSVMVSASEDATIKVWDYE-TGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196 (410)
T ss_dssp SSSSEEEEEESSSCEEEEETT-TCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE
T ss_pred CCCCEEEEEeCCCeEEEEECC-CCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE
Confidence 678999999999999999998 77888899999999999999974 5689999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------------eecccceeEeeEEEee
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRSMLESSFVGHI 130 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~ 130 (221)
+++|+|+++++++++.|+.|++||+++++.+..+. |+.........+.+|.
T Consensus 197 ~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~ 276 (410)
T 1vyh_C 197 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR 276 (410)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCC
Confidence 99999999999999999999999999988776654 4444555566777889
Q ss_pred CceEEEEEecC--------------------CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662 131 NDKNFVGLATD--------------------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV 190 (221)
Q Consensus 131 ~~v~~~~~~~~--------------------~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 190 (221)
..|.+++|+|+ +.+|++|+.|+.|++||++++..+..+. +|...|
T Consensus 277 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~---------------~h~~~v 341 (410)
T 1vyh_C 277 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---------------GHDNWV 341 (410)
T ss_dssp SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE---------------CCSSCE
T ss_pred ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE---------------CCCCcE
Confidence 99999999996 6789999999999999999887665553 688899
Q ss_pred eEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 191 SAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 191 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.+++|+|+|++|++++.||.|++||+.+++
T Consensus 342 ~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 342 RGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp EEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 999999999999999999999999998764
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.2e-41 Score=243.31 Aligned_cols=207 Identities=15% Similarity=0.181 Sum_probs=175.8
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++|++|+.||.|++||+. ++..+..+..|..+|.+++|+| ++.|++++.|+.|++||+++++.+..+.+|...|.
T Consensus 23 p~~~~l~s~~~dg~v~lWd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~ 101 (304)
T 2ynn_A 23 PTEPWVLTTLYSGRVELWNYE-TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR 101 (304)
T ss_dssp SSSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCCCEEEEEcCCCcEEEEECC-CCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEE
Confidence 789999999999999999998 7788899999999999999997 56699999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEE
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYY 158 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d 158 (221)
+++|+|+++++++++.|+.|++||++++..+. ..+.+|...|.+++|+| ++.+|++|+.|+.|++||
T Consensus 102 ~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~------------~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd 169 (304)
T 2ynn_A 102 SIAVHPTKPYVLSGSDDLTVKLWNWENNWALE------------QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (304)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEGGGTTEEE------------EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred EEEEcCCCCEEEEECCCCeEEEEECCCCcchh------------hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999999999998764332 23578999999999999 678999999999999999
Q ss_pred cCCCCceeeee-----------eec--ccc-----------------cccccccccccccceeEEEEcCCCcEEEEecCC
Q psy10662 159 KGLSKHMHAYR-----------FDT--VRS-----------------MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ 208 (221)
Q Consensus 159 ~~~~~~~~~~~-----------~~~--~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 208 (221)
+++......+. +.+ ... .......+.+|...|.+++|+|++++|++++.|
T Consensus 170 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 170 LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSED 249 (304)
T ss_dssp TTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCC
Confidence 87654432221 111 000 111234456889999999999999999999999
Q ss_pred CeEEEEECCccc
Q psy10662 209 GIIKIYVIPIRV 220 (221)
Q Consensus 209 g~i~iw~~~~~~ 220 (221)
|.|++||+.+++
T Consensus 250 g~i~iWd~~~~~ 261 (304)
T 2ynn_A 250 GTLKIWNSSTYK 261 (304)
T ss_dssp SCEEEEETTTCC
T ss_pred CeEEEEECCCCc
Confidence 999999998765
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.4e-41 Score=243.40 Aligned_cols=188 Identities=17% Similarity=0.237 Sum_probs=172.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++|++|+.||.|++|++. .++....+..|...|.+++|+|+ ..|++++.|+.|++||+++++.+..+.+|..+|.
T Consensus 132 pdg~~l~~g~~dg~v~i~~~~-~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 210 (321)
T 3ow8_A 132 PDSQYLATGTHVGKVNIFGVE-SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 210 (321)
T ss_dssp TTSSEEEEECTTSEEEEEETT-TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCC
T ss_pred CCCCEEEEEcCCCcEEEEEcC-CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCcee
Confidence 689999999999999999998 67777888889999999999985 5689999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
+++|+|++++|++++.|+.|++||+++++.... +.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 211 ~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~-------------~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 211 SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-------------LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 277 (321)
T ss_dssp EEEECTTSCEEEEECTTSCEEEEETTTCCEEEE-------------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE-------------EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 999999999999999999999999988776554 4788999999999999999999999999999999
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
.+++.+..+. +|...|.+++|+|++++|++++.||.|++||++
T Consensus 278 ~~~~~~~~~~---------------~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 278 GTRTCVHTFF---------------DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TTTEEEEEEC---------------CCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCCEEEEEEc---------------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9887766553 688899999999999999999999999999986
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=239.77 Aligned_cols=191 Identities=14% Similarity=0.191 Sum_probs=173.7
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++.++++|+.|+.|++||+. +++.+..+..|...+.+++|+|+ ..|++++.|+.|++||+++++....+..|...+.
T Consensus 90 ~~~~~l~s~s~D~~i~lWd~~-~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~ 168 (321)
T 3ow8_A 90 HTLPIAASSSLDAHIRLWDLE-NGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 168 (321)
T ss_dssp SSSSEEEEEETTSEEEEEETT-TTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEE
T ss_pred CCCCEEEEEeCCCcEEEEECC-CCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEE
Confidence 467899999999999999998 77888889999999999999985 5688999999999999999998888888889999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
+++|+|++++|++++.|+.|++||+++++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 169 ~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~-------------~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~ 235 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-------------EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 235 (321)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-------------CCCSSCCCEEEECTTSCEEEEECTTSCEEEEET
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-------------cccCCceeEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence 9999999999999999999999999988876553 678899999999999999999999999999999
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
++.+....+ .+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 236 ~~~~~~~~~---------------~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 236 QHANLAGTL---------------SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp TTCCEEEEE---------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCcceeEEE---------------cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 887765444 3788899999999999999999999999999998764
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.3e-40 Score=247.76 Aligned_cols=201 Identities=22% Similarity=0.380 Sum_probs=178.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++|++|+.|+.|++||+. +.+++..+.+|...|.+++|+|+ ..|++++.|++|++||++++.++..+.+|...|.
T Consensus 160 ~~~~~l~sgs~D~~i~iwd~~-~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~ 238 (410)
T 1vyh_C 160 HSGKLLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR 238 (410)
T ss_dssp TTSSEEEEEETTSCCCEEETT-SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCCeEEEEeCC-CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEE
Confidence 678999999999999999998 77888889999999999999985 5699999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------------------------------------------
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------------------------------- 114 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------------------- 114 (221)
++.++|++.++++++.|+.|++||+.+++....+.
T Consensus 239 ~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 99999999999999999999999998776544331
Q ss_pred ----eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662 115 ----FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV 190 (221)
Q Consensus 115 ----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 190 (221)
|+.........+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+. +|...|
T Consensus 319 ~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~---------------~h~~~v 383 (410)
T 1vyh_C 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN---------------AHEHFV 383 (410)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE---------------CCSSCE
T ss_pred eEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc---------------CCCCcE
Confidence 3445556667788899999999999999999999999999999998877665553 688899
Q ss_pred eEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 191 SAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 191 ~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
++++|+|++.+|++|+.||.|++|+++
T Consensus 384 ~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 384 TSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999999999999999874
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.4e-39 Score=236.16 Aligned_cols=194 Identities=21% Similarity=0.332 Sum_probs=172.0
Q ss_pred CCCceEEEEeCCCeEEEEEecCCc---eeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTK---EALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
|++++|++|+.|+.|++|++.... .....+.+|.+.|.++.|++++.+++++.|+.|++||+++++.+..+.+|...
T Consensus 107 ~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~ 186 (340)
T 1got_B 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGD 186 (340)
T ss_dssp TTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCc
Confidence 688999999999999999997322 45667889999999999999889999999999999999999999999999999
Q ss_pred eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662 78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 157 (221)
|.+++|+|++.++++++.|+.|++||+++++.+.. +.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 187 v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~-------------~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iw 253 (340)
T 1got_B 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT-------------FTGHESDINAICFFPNGNAFATGSDDATCRLF 253 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE-------------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE-------------EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 99999999999999999999999999998877655 46889999999999999999999999999999
Q ss_pred EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
|+++.+.+..+. ...+...|.+++|+|+|++|++|+.||.|++||+.+++
T Consensus 254 d~~~~~~~~~~~-------------~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 254 DLRADQELMTYS-------------HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp ETTTTEEEEEEC-------------CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ECCCCcEEEEEc-------------cCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc
Confidence 998876554432 11234579999999999999999999999999997653
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-39 Score=238.11 Aligned_cols=185 Identities=18% Similarity=0.303 Sum_probs=165.5
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEE
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVG 82 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~ 82 (221)
..+++++.|+.|++||+. +++.+..+.+|.+.|.+++|+|+ ..+++++.|+.|++||+++++.+..+.+|...|.+++
T Consensus 155 ~~l~s~s~d~~i~~wd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 155 NQIVTSSGDTTCALWDIE-TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233 (340)
T ss_dssp TEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE
T ss_pred CcEEEEECCCcEEEEECC-CCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEE
Confidence 458899999999999998 78888899999999999999985 4588999999999999999999999999999999999
Q ss_pred EeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC
Q psy10662 83 LATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS 162 (221)
Q Consensus 83 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 162 (221)
|+|++++|++++.|+.|++||+++++.+..+. ...+...+.+++|+|++++|++|+.|+.|++||+.+.
T Consensus 234 ~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-----------~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYS-----------HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----------CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-----------cCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 99999999999999999999999888765541 1123347899999999999999999999999999887
Q ss_pred CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662 163 KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV 215 (221)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~ 215 (221)
+....+. +|...|.+++|+|+|++|++|+.|+.|++||
T Consensus 303 ~~~~~~~---------------~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 303 DRAGVLA---------------GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEEE---------------CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cEeeEee---------------cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 7655543 7889999999999999999999999999996
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3e-39 Score=238.21 Aligned_cols=188 Identities=16% Similarity=0.276 Sum_probs=167.2
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
|++..|++|+.|++|++||++ +++.+..+.+|...|.+++|+| +..|++++.||.|++||+++++++..+..|...
T Consensus 164 ~~~~~l~t~s~D~~v~lwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~ 242 (354)
T 2pbi_B 164 NSDMQILTASGDGTCALWDVE-SGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESD 242 (354)
T ss_dssp SSSSEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSC
T ss_pred CCCCEEEEEeCCCcEEEEeCC-CCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC
Confidence 567899999999999999998 7888899999999999999986 357999999999999999999999999999999
Q ss_pred eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662 78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 157 (221)
|.+++|+|++.++++++.|+.|++||++..+.+..+. ...+...+.+++|+|++++|++|+.|+.|++|
T Consensus 243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~-----------~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYS-----------KESIIFGASSVDFSLSGRLLFAGYNDYTINVW 311 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----------CTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-----------CCCcccceeEEEEeCCCCEEEEEECCCcEEEE
Confidence 9999999999999999999999999999887665431 11223468899999999999999999999999
Q ss_pred EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662 158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV 215 (221)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~ 215 (221)
|+.+++.+..+ .+|...|.+++|+|+|++|++++.||.|++|+
T Consensus 312 d~~~~~~~~~l---------------~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 312 DVLKGSRVSIL---------------FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTTCSEEEEE---------------CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCceEEEE---------------ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99887765444 37889999999999999999999999999996
No 10
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.3e-38 Score=231.76 Aligned_cols=219 Identities=19% Similarity=0.325 Sum_probs=171.5
Q ss_pred CCceEEEEeCCCeEEEEEecCC------ceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecc
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNT------KEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGH 74 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~------~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~ 74 (221)
|+++|++|+.|++|++||+... +.+...+.+|...|.+++|+|+ ..+++++.|++|++||+++++.+..+.+|
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 7889999999999999999732 3456778899999999999985 55889999999999999999999999999
Q ss_pred ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCee------------eEEEEeec-------------------------
Q psy10662 75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH------------MHAYRFDT------------------------- 117 (221)
Q Consensus 75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~------------~~~~~~~~------------------------- 117 (221)
...|.+++|+|+++++++++.|+.|++||+..... +..+.+.+
T Consensus 118 ~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 118 QSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 99999999999999999999999999999863221 12222211
Q ss_pred ---ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC-Cc---------eeeeeeecccccc-------
Q psy10662 118 ---VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS-KH---------MHAYRFDTVRSML------- 177 (221)
Q Consensus 118 ---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~---------~~~~~~~~~~~~~------- 177 (221)
........+.+|...|.+++|+|++++|++|+.||.|++||+... .. +..+.|.+....+
T Consensus 198 iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~ 277 (343)
T 2xzm_R 198 VWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQG 277 (343)
T ss_dssp EEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSC
T ss_pred EEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCC
Confidence 122334566788999999999999999999999999999998432 22 1222232221100
Q ss_pred -----------c---cc--------ccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 178 -----------E---RD--------RNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 178 -----------~---~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
. .+ ....+|...|.+++|+|+|++|++|+.||.|++|+++++.
T Consensus 278 v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 278 VKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp EEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred EEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 0 00 0112577789999999999999999999999999998763
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.5e-38 Score=231.46 Aligned_cols=204 Identities=19% Similarity=0.330 Sum_probs=169.7
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++|++|+.|+.|++||+. +++.+..+.+|...|.+++|+|+ ..+++++.|++|++||++ ++.+..+.+|...|.
T Consensus 75 ~dg~~l~s~s~D~~v~~wd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~ 152 (319)
T 3frx_A 75 ADGAYALSASWDKTLRLWDVA-TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVS 152 (319)
T ss_dssp TTSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEE
T ss_pred CCCCEEEEEeCCCEEEEEECC-CCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEE
Confidence 689999999999999999998 78888999999999999999974 569999999999999996 556677888999999
Q ss_pred EEEEeCCC------CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662 80 FVGLATDG------DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS 153 (221)
Q Consensus 80 ~~~~~~~~------~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 153 (221)
++.|.|.. ..+++++.|+.|++||+++.+.... +.+|...|.+++|+|++++|++++.||.
T Consensus 153 ~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~-------------~~~h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 153 QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD-------------FIGHNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp EEEECCC------CCEEEEEETTSCEEEEETTTTEEEEE-------------ECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhee-------------ecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 99999854 4899999999999999988776544 4789999999999999999999999999
Q ss_pred EEEEEcCCCCceeeee---------eeccccccc-------------------cc-----ccccccccceeEEEEcCCCc
Q psy10662 154 LYIYYKGLSKHMHAYR---------FDTVRSMLE-------------------RD-----RNEDDTNEFVSAVCWRQLSR 200 (221)
Q Consensus 154 i~~~d~~~~~~~~~~~---------~~~~~~~~~-------------------~~-----~~~~~~~~~v~~~~~~~~~~ 200 (221)
|++||+.+++.+..+. |.+.+..+. .. .....+...+.+++|+|+|+
T Consensus 220 i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 299 (319)
T 3frx_A 220 IMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ 299 (319)
T ss_dssp EEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS
T ss_pred EEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC
Confidence 9999998877655443 222111100 00 01123456789999999999
Q ss_pred EEEEecCCCeEEEEECCcc
Q psy10662 201 VLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 201 ~l~~~~~dg~i~iw~~~~~ 219 (221)
+|++|+.||.|++|++.++
T Consensus 300 ~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 300 TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEEETTSCEEEEEEEEC
T ss_pred EEEEeecCceEEEEEEeec
Confidence 9999999999999999875
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.8e-39 Score=238.60 Aligned_cols=188 Identities=17% Similarity=0.250 Sum_probs=164.7
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCccceee--ecccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPNCLRSF--VGHIN 76 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~--~~~~~ 76 (221)
||+++|++|+.||.|++||+. +++.+..+.+|...|.+++|+++ ..+++++.|+.|++||++++++...+ ..+..
T Consensus 149 pdg~~l~sgs~dg~v~iwd~~-~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~ 227 (357)
T 4g56_B 149 SDGTQAVSGGKDFSVKVWDLS-QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDT 227 (357)
T ss_dssp SSSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCS
T ss_pred CCCCEEEEEeCCCeEEEEECC-CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccc
Confidence 689999999999999999998 78889999999999999999974 46889999999999999998877655 34667
Q ss_pred ceeEEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC-CEEEEecCCCeE
Q psy10662 77 DKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG-DYVACGSENNSL 154 (221)
Q Consensus 77 ~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i 154 (221)
.+.+++|+|++ .++++|+.|+.|++||+++++.+.. +.+|...|++++|+|++ ++|++|+.|+.|
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~-------------~~~~~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQT-------------SAVHSQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEE-------------ECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCcEeEE-------------EeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 89999999975 5789999999999999998877655 46788999999999987 579999999999
Q ss_pred EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEEEECCc
Q psy10662 155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~ 218 (221)
++||+++++.+..+ +|...|++++|+| ++++|++++.||.|++|++++
T Consensus 295 ~iwd~~~~~~~~~~----------------~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 295 AVLDADFSEVFRDL----------------SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEECTTSCEEEEEC----------------CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEECCCCcEeEEC----------------CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 99999877654322 5888999999998 799999999999999999975
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.9e-38 Score=230.15 Aligned_cols=192 Identities=22% Similarity=0.316 Sum_probs=172.8
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++|++|+.||.|++|++. .++....+.+|...|.+++|+|+ ..|++++.|+.|++||+++++.+..+.+|...|.
T Consensus 33 ~~~~~l~s~~~dg~i~iw~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 111 (312)
T 4ery_A 33 PNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF 111 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCCCEEEEeeCCCeEEEEeCC-CcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence 689999999999999999997 67778889999999999999985 5689999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
+++|+|+++++++++.|+.|++||+++++.+..+ ..|...+.+++|+|+++++++++.||.|++||+
T Consensus 112 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 112 CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-------------PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe-------------cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 9999999999999999999999999988776553 678889999999999999999999999999999
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
++++.+..+. ..+...+..++|+|++++|++++.||.|++||+.+++
T Consensus 179 ~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 179 ASGQCLKTLI--------------DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp TTCCEEEEEC--------------CSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE
T ss_pred CCCceeeEEe--------------ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 8877654432 1355678999999999999999999999999998764
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-38 Score=229.85 Aligned_cols=196 Identities=14% Similarity=0.194 Sum_probs=164.1
Q ss_pred CCCceEEEEeCCCeEEEEEecC-CceeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCc--cceeeecc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRN-TKEALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPN--CLRSFVGH 74 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~ 74 (221)
|+|++||+|+.|+.|+|||+.. ..+.+..+.+|.++|.+++|++ +..|++++.|++|++||+++++ .+..+..|
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h 98 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH 98 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC
Confidence 6899999999999999999973 2467788999999999999974 5679999999999999998874 45567789
Q ss_pred ccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-----------
Q psy10662 75 INDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD----------- 141 (221)
Q Consensus 75 ~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------- 141 (221)
...|.+++|+|+ +.+|++++.|+.|++||++.+.... ...+.+|...|.+++|+|+
T Consensus 99 ~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-----------~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~ 167 (297)
T 2pm7_B 99 SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-----------PIIIDAHAIGVNSASWAPATIEEDGEHNGT 167 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-----------CEEEECCSSCEEEEEECCCC----------
T ss_pred CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-----------eeeeecccCccceEeecCCcccccccCCCC
Confidence 999999999997 7899999999999999998653211 1235688899999999997
Q ss_pred --CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC---cEEEEecCCCeEEEEEC
Q psy10662 142 --GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS---RVLVAANSQGIIKIYVI 216 (221)
Q Consensus 142 --~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iw~~ 216 (221)
+++|++|+.|+.|++||++++...... ...+.+|...|.+++|+|++ ++|++++.|+.|++|++
T Consensus 168 ~~~~~l~sgs~D~~v~lwd~~~~~~~~~~-----------~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 168 KESRKFVTGGADNLVKIWKYNSDAQTYVL-----------ESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp --CCEEEEEETTSCEEEEEEETTTTEEEE-----------EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred CCcceEEEEcCCCcEEEEEEcCCCceEEE-----------EEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 579999999999999998776532211 11234789999999999984 89999999999999998
Q ss_pred Cc
Q psy10662 217 PI 218 (221)
Q Consensus 217 ~~ 218 (221)
.+
T Consensus 237 ~~ 238 (297)
T 2pm7_B 237 DN 238 (297)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=235.85 Aligned_cols=204 Identities=12% Similarity=0.132 Sum_probs=161.4
Q ss_pred CCCceEEEEeCCCeEEEEEecC----------CceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRN----------TKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRS 70 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~ 70 (221)
|||++|++++ |+++++||... ..........+...|.+++|+|++.|++++.||+|++||+++++.+..
T Consensus 40 ~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~ 118 (344)
T 4gqb_B 40 SDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIV 118 (344)
T ss_dssp TTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEE
T ss_pred CCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeE
Confidence 6899999887 67778776320 111122334477889999999999999999999999999998876654
Q ss_pred e----eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE------------------------------ee
Q psy10662 71 F----VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR------------------------------FD 116 (221)
Q Consensus 71 ~----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~------------------------------~~ 116 (221)
+ .+|.+.|++++|+|++++|++++.|+.|++||+++++.+..+. |+
T Consensus 119 ~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd 198 (344)
T 4gqb_B 119 SKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWD 198 (344)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred eeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccc
Confidence 3 4799999999999999999999999999999999998887764 33
Q ss_pred cccceeEeeE--EEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEE
Q psy10662 117 TVRSMLESSF--VGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAV 193 (221)
Q Consensus 117 ~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 193 (221)
....+....+ ..+...+.+++|+| +++++++|+.||.|++||+++++.+..+. +|...|+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~---------------~h~~~v~~v 263 (344)
T 4gqb_B 199 TRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA---------------VHSQCVTGL 263 (344)
T ss_dssp TTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE---------------CCSSCEEEE
T ss_pred ccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc---------------CCCCCEEEE
Confidence 3333333333 23455688999998 45788999999999999999887766554 788899999
Q ss_pred EEcCCC-cEEEEecCCCeEEEEECCccc
Q psy10662 194 CWRQLS-RVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 194 ~~~~~~-~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+|+|++ ++|++++.|+.|++||+.+++
T Consensus 264 ~fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred EEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 999998 589999999999999998875
No 16
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.7e-38 Score=230.08 Aligned_cols=189 Identities=16% Similarity=0.258 Sum_probs=165.6
Q ss_pred CceEEEEeCCCeEEEEEecCC----ceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNT----KEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
+++|++|+.|++|++|++... +.++..+.+|...|.+++|+|+ .+|++++.|++|++||+++++.+..+.+|...
T Consensus 30 ~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~ 109 (319)
T 3frx_A 30 PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD 109 (319)
T ss_dssp TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred ccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc
Confidence 479999999999999998632 3457788999999999999975 56899999999999999999999999999999
Q ss_pred eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC------CCEEEEecCC
Q psy10662 78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD------GDYVACGSEN 151 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d 151 (221)
|.+++|+|++.++++++.|+.|++||++.. .+ ..+.+|...+.+++|+|. +..+++++.|
T Consensus 110 v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~-------------~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d 175 (319)
T 3frx_A 110 VMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CL-------------ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGND 175 (319)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTSC-EE-------------EEECCCSSCEEEEEECCC------CCEEEEEETT
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eE-------------EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCC
Confidence 999999999999999999999999998643 32 234688899999999985 4589999999
Q ss_pred CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+.|++||+++.+....+ .+|...|.+++|+|+|++|++++.||.|++||+.+++
T Consensus 176 ~~i~~wd~~~~~~~~~~---------------~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 176 KMVKAWNLNQFQIEADF---------------IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp SCEEEEETTTTEEEEEE---------------CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred CEEEEEECCcchhheee---------------cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999876654433 3788899999999999999999999999999998764
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=234.30 Aligned_cols=192 Identities=17% Similarity=0.279 Sum_probs=162.6
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceee--E-EEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC--ccceeeecc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEAL--A-VFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP--NCLRSFVGH 74 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~--~-~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~--~~~~~~~~~ 74 (221)
|+|++||+|+.|+.|+|||+. .+... . ...+|...|.+++|+|+ .+|++++.|+.+++||+..+ +.+..+.+|
T Consensus 26 p~g~~las~~~D~~i~iw~~~-~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h 104 (345)
T 3fm0_A 26 PAGTLLASCGGDRRIRIWGTE-GDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGH 104 (345)
T ss_dssp TTSSCEEEEETTSCEEEEEEE-TTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCC
T ss_pred CCCCEEEEEcCCCeEEEEEcC-CCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCC
Confidence 789999999999999999998 44322 2 22579999999999985 56999999999999999776 456778899
Q ss_pred ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662 75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL 154 (221)
Q Consensus 75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 154 (221)
...|.+++|+|++++|++++.|+.|++||++.++... ....+.+|...|.+++|+|++++|++++.|+.|
T Consensus 105 ~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~----------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i 174 (345)
T 3fm0_A 105 ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE----------CVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE----------EEEEECCCCSCEEEEEECSSSSCEEEEETTSCE
T ss_pred CCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE----------EEEEecCcCCCeEEEEECCCCCEEEEEeCCCcE
Confidence 9999999999999999999999999999998664322 223457888999999999999999999999999
Q ss_pred EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662 155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 216 (221)
++||.+....... ..+.+|...|.+++|+|+|++|++++.|+.|++|+.
T Consensus 175 ~~w~~~~~~~~~~-------------~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 175 KLYREEEDDWVCC-------------ATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp EEEEEETTEEEEE-------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EEEEecCCCEEEE-------------EEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 9999876543221 123478899999999999999999999999999996
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.5e-38 Score=225.76 Aligned_cols=202 Identities=18% Similarity=0.251 Sum_probs=169.8
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC-ccceeeeccccce
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP-NCLRSFVGHINDK 78 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~-~~~~~~~~~~~~v 78 (221)
|++++|++|+.|+.|++||+. +++.+..+.+|.+.|.+++|+|+ ..|++++.|++|++||++++ .....+.+|...|
T Consensus 65 ~~~~~l~s~s~d~~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v 143 (304)
T 2ynn_A 65 ARKNWIIVGSDDFRIRVFNYN-TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV 143 (304)
T ss_dssp GGGTEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCE
T ss_pred CCCCEEEEECCCCEEEEEECC-CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcE
Confidence 578899999999999999998 77888899999999999999985 56899999999999999887 4456678899999
Q ss_pred eEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEE--------------------------------eecccceeEee
Q psy10662 79 NFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------------------FDTVRSMLESS 125 (221)
Q Consensus 79 ~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------~~~~~~~~~~~ 125 (221)
.+++|+| ++.++++++.|+.|++||+++.+....+. |+......+..
T Consensus 144 ~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~ 223 (304)
T 2ynn_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223 (304)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcccee
Confidence 9999999 57899999999999999987654332221 55566677788
Q ss_pred EEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc--EEE
Q psy10662 126 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR--VLV 203 (221)
Q Consensus 126 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~ 203 (221)
+.+|...|.+++|+|++++|++|+.||.|++||+.+.+.+..+. .|...+.+++|+|++. +++
T Consensus 224 ~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~a 288 (304)
T 2ynn_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN---------------VGLERSWCIATHPTGRKNYIA 288 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC---------------CSSSSEEEEEECTTCGGGCEE
T ss_pred eCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc---------------CCCccEEEEEECCCCCceEEE
Confidence 88999999999999999999999999999999999888766553 5667899999999875 577
Q ss_pred EecCCCeEEEEECCcc
Q psy10662 204 AANSQGIIKIYVIPIR 219 (221)
Q Consensus 204 ~~~~dg~i~iw~~~~~ 219 (221)
+|+.|| +.+|++...
T Consensus 289 sg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 289 SGFDNG-FTVLSLGND 303 (304)
T ss_dssp EEETTE-EEEEECC--
T ss_pred EecCCc-eEEEEeccC
Confidence 776555 788887653
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.4e-38 Score=234.09 Aligned_cols=199 Identities=19% Similarity=0.325 Sum_probs=167.2
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEE-----EeccCceEEEEEec--CCcEEEecCCCcEEEEEcC-CCccceeeecc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVF-----KGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNIN-KPNCLRSFVGH 74 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~-----~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~-~~~~~~~~~~~ 74 (221)
+..|++|+.|+.|++||+. +++.+..+ .+|...|.+++|++ +..+++|+.|+.|++||++ ..+.+..+.+|
T Consensus 170 ~~~l~s~s~D~~i~~wd~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h 248 (380)
T 3iz6_a 170 ETRLITGSGDQTCVLWDVT-TGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH 248 (380)
T ss_dssp SSCEEEECTTSCEEEECTT-TCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC
T ss_pred CCEEEEECCCCcEEEEEcC-CCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc
Confidence 4579999999999999998 67777666 57889999999985 4669999999999999998 45777888899
Q ss_pred ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662 75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL 154 (221)
Q Consensus 75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 154 (221)
...|.+++|+|++++|++++.|+.|++||+++++.+..+...... ...+...+++++|+|+|++|++|+.||.|
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~~g~~dg~i 322 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR------NDNELPIVTSVAFSISGRLLFAGYSNGDC 322 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS------SCCSSCSCSEEEECSSSSEEEEECTTSCE
T ss_pred CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc------cccccCceEEEEECCCCCEEEEEECCCCE
Confidence 999999999999999999999999999999999887765322111 01223358899999999999999999999
Q ss_pred EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
++||+..++....+. ....+|...|++++|+|+|++|++|+.|+.|++|++...
T Consensus 323 ~vwd~~~~~~~~~~~-----------~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 323 YVWDTLLAEMVLNLG-----------TLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EEEETTTCCEEEEEC-----------CSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred EEEECCCCceEEEEe-----------cccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 999998777654432 012368889999999999999999999999999999865
No 20
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.8e-38 Score=230.28 Aligned_cols=220 Identities=19% Similarity=0.247 Sum_probs=172.2
Q ss_pred CCCceEEEEeCCCeEEEEEecCCc---eeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCC---------
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTK---EALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKP--------- 65 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~--------- 65 (221)
|++++|++|+.||.|++||+.... +....+.+|...|.+++|+| +..|++++.||.|++||++++
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 100 (351)
T 3f3f_A 21 FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW 100 (351)
T ss_dssp SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE
T ss_pred CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc
Confidence 688999999999999999998322 46777889999999999997 567999999999999999876
Q ss_pred ccceeeeccccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------eec---
Q psy10662 66 NCLRSFVGHINDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------FDT--- 117 (221)
Q Consensus 66 ~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------~~~--- 117 (221)
+.+..+..|...|.+++|+|+ +.++++++.|+.|++||+++++.+..+. |.+
T Consensus 101 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 180 (351)
T 3f3f_A 101 NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRF 180 (351)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSS
T ss_pred ceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCC
Confidence 446677789999999999999 9999999999999999997765433221 111
Q ss_pred -------------------ccc--eeEeeEEEeeCceEEEEEecCC----CEEEEecCCCeEEEEEcCCCCceeeeeeec
Q psy10662 118 -------------------VRS--MLESSFVGHINDKNFVGLATDG----DYVACGSENNSLYIYYKGLSKHMHAYRFDT 172 (221)
Q Consensus 118 -------------------~~~--~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 172 (221)
... .....+.+|...|.+++|+|++ ++|++++.||.|++||++............
T Consensus 181 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 260 (351)
T 3f3f_A 181 SPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESL 260 (351)
T ss_dssp SCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------
T ss_pred CCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcc
Confidence 111 2245566789999999999998 899999999999999998653322110000
Q ss_pred -------------------------------ccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 173 -------------------------------VRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 173 -------------------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
..........+.+|...|++++|+|++++|++++.||.|++|++.+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 261 TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp ------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred cceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 000112334456788999999999999999999999999999998764
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1e-37 Score=244.87 Aligned_cols=214 Identities=18% Similarity=0.196 Sum_probs=169.8
Q ss_pred CCCceEEEEeCCCeEEEEEecCC-ceeeEE--------------------------------------------EEeccC
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNT-KEALAV--------------------------------------------FKGHRK 35 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~--------------------------------------------~~~~~~ 35 (221)
|||++||+|+.||+|+|||+.+. ...... +.+|..
T Consensus 69 pdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~ 148 (611)
T 1nr0_A 69 PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQAR 148 (611)
T ss_dssp TTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSS
T ss_pred CCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCC
Confidence 79999999999999999998521 111122 234666
Q ss_pred ceEEEEEecCC--cEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEE
Q psy10662 36 AVSYVKFLNKE--DIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY 113 (221)
Q Consensus 36 ~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~ 113 (221)
.|.+++|+|++ .|++++.|++|++||..+++....+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence 77777777753 4899999999999999998888889999999999999999999999999999999999988876654
Q ss_pred EeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccc-------------------
Q psy10662 114 RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVR------------------- 174 (221)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~------------------- 174 (221)
.... ....+|...|.+++|+|++++|++++.|+.|++||+.+++....+......
T Consensus 229 ~~~~------~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~ 302 (611)
T 1nr0_A 229 EDDS------LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 302 (611)
T ss_dssp BCTT------SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEET
T ss_pred cccc------ccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeC
Confidence 1000 001268899999999999999999999999999999988776555321000
Q ss_pred ---------ccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 175 ---------SMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 175 ---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
........+.+|...|.+++|+|+|++|++++.|+.|++||+.+++
T Consensus 303 d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 303 NGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp TCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence 0001122345789999999999999999999999999999998753
No 22
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.4e-37 Score=230.12 Aligned_cols=194 Identities=11% Similarity=0.092 Sum_probs=158.1
Q ss_pred CCCceEEEE--eCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcccee--eecccc
Q psy10662 1 MNSCHLAFG--SADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRS--FVGHIN 76 (221)
Q Consensus 1 ~~~~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~--~~~~~~ 76 (221)
|||++|++| +.|++|+|||+. +++++..+. |...|.+++|+|++.+++.+.++.+++|+..+++.+.. ...|..
T Consensus 143 pDg~~la~as~~~d~~i~iwd~~-~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 143 REGTVAAIASSKVPAIMRIIDPS-DLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp TTSSCEEEEESCSSCEEEEEETT-TTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTE
T ss_pred CCCCEEEEEECCCCCEEEEeECC-CCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCC
Confidence 789987654 478999999998 777777776 78899999999976655444466777888777765543 356788
Q ss_pred ceeEEEEeCCCCEEEEecCCC----eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662 77 DKNFVGLATDGDYVACGSENN----SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN 152 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 152 (221)
.|.+++|+|+++++++++.|+ .+++|++........ ....+.+|...|++++|+|+|++||+|+.|+
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVL---------RSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEE---------EEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecce---------eeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 899999999999999998877 688888766543221 1234567888999999999999999999999
Q ss_pred eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
.|+|||+++++.+..+ +.+|...|++++|+|||++|+++|.|++|+||+++..
T Consensus 292 ~V~iwd~~~~~~~~~~--------------~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 292 SIALVKLKDLSMSKIF--------------KQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CEEEEETTTTEEEEEE--------------TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEEEEECCCCcEEEEe--------------cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999988766543 2379999999999999999999999999999999753
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.1e-38 Score=229.59 Aligned_cols=208 Identities=15% Similarity=0.245 Sum_probs=165.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCc---cceeeeccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPN---CLRSFVGHI 75 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~---~~~~~~~~~ 75 (221)
|++++|++|+.|+.|++|++.... +.+..+.+|...|.+++|+|+ ..|++++.|+.|++||++++. .+..+..|.
T Consensus 71 p~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~ 150 (345)
T 3fm0_A 71 PCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT 150 (345)
T ss_dssp TTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCC
T ss_pred CCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcC
Confidence 689999999999999999987332 567788999999999999984 569999999999999998764 345667899
Q ss_pred cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662 76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY 155 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 155 (221)
..|.+++|+|++++|++++.|+.|++||.+.++... ...+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 151 ~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~-----------~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~ 219 (345)
T 3fm0_A 151 QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC-----------CATLEGHESTVWSLAFDPSGQRLASCSDDRTVR 219 (345)
T ss_dssp SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE-----------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE-----------EEEecCCCCceEEEEECCCCCEEEEEeCCCeEE
Confidence 999999999999999999999999999987765432 234578999999999999999999999999999
Q ss_pred EEEcCCCCceeeeeeeccccccccccccc-ccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 156 IYYKGLSKHMHAYRFDTVRSMLERDRNED-DTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
+||.........+..............+. .|...|.+++|+|++..|++++.|+.|++|+..++
T Consensus 220 iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 220 IWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp EEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred EeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence 99975433221111100001111111222 37788999999999999999999999999998653
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.5e-37 Score=226.60 Aligned_cols=190 Identities=13% Similarity=0.141 Sum_probs=168.2
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC------ccceeeec
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP------NCLRSFVG 73 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~------~~~~~~~~ 73 (221)
||+++|++|+.||.|++||.. +.+....+..|...|.+++|+|+ ..+++++.|+.+++|++... .....+..
T Consensus 74 ~d~~~l~s~s~Dg~v~vWd~~-~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~ 152 (354)
T 2pbi_B 74 KDKRRIVSSSQDGKVIVWDSF-TTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAM 152 (354)
T ss_dssp TTSSEEEEEETTSEEEEEETT-TCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECC-CCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeec
Confidence 688999999999999999997 66777888889999999999985 56899999999999998643 34456678
Q ss_pred cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec--CCCEEEEecCC
Q psy10662 74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT--DGDYVACGSEN 151 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d 151 (221)
|...|.+++|+|++..+++++.|+.|++||+++++.+.. +.+|...+.+++|+| ++++|++|+.|
T Consensus 153 h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~-------------~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 153 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQS-------------FHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEE-------------EECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred cCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEE-------------EcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence 999999999999999999999999999999998887665 478899999999987 57899999999
Q ss_pred CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
|.|++||+++++.+..+. .|...|++++|+|++++|++++.|+.|++||++++
T Consensus 220 g~v~~wd~~~~~~~~~~~---------------~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFE---------------THESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp SCEEEEETTTCCEEEEEC---------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CeEEEEECCCCcEEEEec---------------CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 999999999887665543 68889999999999999999999999999999764
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.2e-37 Score=229.75 Aligned_cols=209 Identities=16% Similarity=0.286 Sum_probs=167.6
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
||+++|++|+.|+.|++||+. +++.+..+.+|...|.+++|+|+ ..|++++.|++|++||+++++....+. +...+.
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~ 210 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIE-NRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVT 210 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEE
T ss_pred CCCCEEEEEcCCCeEEEEECC-CCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcE
Confidence 689999999999999999998 77888899999999999999974 569999999999999999998877765 567799
Q ss_pred EEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662 80 FVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY 158 (221)
Q Consensus 80 ~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 158 (221)
+++|+| +++++++++.|+.|++||+++++.+..+... .....+|...|.+++|+|++++|++|+.|+.|++||
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~------~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE------NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccc------ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 999999 8899999999999999999998876654211 112246888999999999999999999999999999
Q ss_pred cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
++........... ........+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 285 ~~~~~~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 285 LQNANNKSDSKTP---NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp C------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred CCCCCCcccccCC---CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe
Confidence 9865432221100 0011122345788899999999999999999999999999998764
No 26
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.8e-37 Score=228.98 Aligned_cols=205 Identities=14% Similarity=0.188 Sum_probs=159.3
Q ss_pred CCCceEEEEeC------CCeEEEEEecCCc---eeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccce--
Q psy10662 1 MNSCHLAFGSA------DHCVHYYDLRNTK---EALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLR-- 69 (221)
Q Consensus 1 ~~~~~l~~~~~------dg~i~i~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~-- 69 (221)
|||++||+|+. |+.|++|+..... ........|...|.+++|+|++.+++++.||+|++||+.+++...
T Consensus 52 pDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~ 131 (357)
T 4g56_B 52 RDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVN 131 (357)
T ss_dssp SSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCC
T ss_pred CCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEE
Confidence 79999999997 7889999876221 223445679999999999999999999999999999998876543
Q ss_pred --eeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE------------------------------eec
Q psy10662 70 --SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR------------------------------FDT 117 (221)
Q Consensus 70 --~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~------------------------------~~~ 117 (221)
...+|...|.+++|+|++++|++++.|+.|++||+++++.+..+. |+.
T Consensus 132 ~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~ 211 (357)
T 4g56_B 132 KFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDT 211 (357)
T ss_dssp CEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCT
T ss_pred eeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEEC
Confidence 234788999999999999999999999999999999998877664 122
Q ss_pred ccceeEee--EEEeeCceEEEEEecC-CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEE
Q psy10662 118 VRSMLESS--FVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVC 194 (221)
Q Consensus 118 ~~~~~~~~--~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 194 (221)
........ ...+...+.+++|+|+ +.+|++|+.|+.|++||+++++.+..+. +|...|++++
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~---------------~~~~~v~~l~ 276 (357)
T 4g56_B 212 RKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA---------------VHSQNITGLA 276 (357)
T ss_dssp TSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC---------------CCSSCEEEEE
T ss_pred CCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe---------------ccceeEEEEE
Confidence 22221111 1235567899999997 5688999999999999998877665543 6788999999
Q ss_pred EcCCC-cEEEEecCCCeEEEEECCccc
Q psy10662 195 WRQLS-RVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 195 ~~~~~-~~l~~~~~dg~i~iw~~~~~~ 220 (221)
|+|++ ++|++++.|+.|++||+++++
T Consensus 277 ~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 277 YSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp ECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred EcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 99987 689999999999999999875
No 27
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.3e-37 Score=226.18 Aligned_cols=196 Identities=20% Similarity=0.273 Sum_probs=161.0
Q ss_pred CCCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCc--cceeeecc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPN--CLRSFVGH 74 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~ 74 (221)
|+|++||+|+.|+.|+|||+.+.. ..+..+.+|.++|.+++|++ +..|++++.|++|++||+++++ ....+.+|
T Consensus 23 ~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h 102 (316)
T 3bg1_A 23 YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGH 102 (316)
T ss_dssp GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCC
T ss_pred CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCC
Confidence 578999999999999999998432 35678899999999999973 5779999999999999998874 45567789
Q ss_pred ccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-----------
Q psy10662 75 INDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD----------- 141 (221)
Q Consensus 75 ~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------- 141 (221)
...|.+++|+|+ +.+|++++.|+.|++||++...... ....+.+|...+.+++|+|+
T Consensus 103 ~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~----------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 172 (316)
T 3bg1_A 103 DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE----------VKKINNAHTIGCNAVSWAPAVVPGSLIDHPS 172 (316)
T ss_dssp SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE----------ECCBTTSSSSCBCCCEECCCCCC------CC
T ss_pred CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc----------eeeeeccccCCcceEEEccccCCcccccccc
Confidence 999999999998 7899999999999999987653211 11223567788999999987
Q ss_pred ------CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC----cEEEEecCCCeE
Q psy10662 142 ------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS----RVLVAANSQGII 211 (221)
Q Consensus 142 ------~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i 211 (221)
+++|++|+.|+.|++||++...... ....+.+|...|.+++|+|++ ++|++++.|+.|
T Consensus 173 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~------------~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v 240 (316)
T 3bg1_A 173 GQKPNYIKRFASGGCDNLIKLWKEEEDGQWK------------EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240 (316)
T ss_dssp SCCCCCCCBEECCBTTSBCCEEEECTTSCEE------------EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEE
T ss_pred ccCccccceEEEecCCCeEEEEEeCCCCccc------------eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeE
Confidence 4789999999999999986542211 112345789999999999987 899999999999
Q ss_pred EEEECCc
Q psy10662 212 KIYVIPI 218 (221)
Q Consensus 212 ~iw~~~~ 218 (221)
++|++.+
T Consensus 241 ~iw~~~~ 247 (316)
T 3bg1_A 241 FIWTCDD 247 (316)
T ss_dssp EEEECSS
T ss_pred EEEEccC
Confidence 9999875
No 28
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.8e-36 Score=221.81 Aligned_cols=220 Identities=20% Similarity=0.334 Sum_probs=173.5
Q ss_pred CC-CceEEEEeCCCeEEEEEecCC----ceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecc
Q psy10662 1 MN-SCHLAFGSADHCVHYYDLRNT----KEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGH 74 (221)
Q Consensus 1 ~~-~~~l~~~~~dg~i~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~ 74 (221)
|+ +++|++|+.||+|+|||+... ..+...+.+|...|.+++|+|+ ..|++++.|+.|++|+............+
T Consensus 48 p~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~ 127 (340)
T 4aow_A 48 PQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGH 127 (340)
T ss_dssp TTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCC
Confidence 55 689999999999999999732 2456778899999999999985 55889999999999999988888777778
Q ss_pred ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEE-----------EE---------------------eeccccee
Q psy10662 75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA-----------YR---------------------FDTVRSML 122 (221)
Q Consensus 75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-----------~~---------------------~~~~~~~~ 122 (221)
...+....+++++.++++++.|+.+++||+........ .. |+......
T Consensus 128 ~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~ 207 (340)
T 4aow_A 128 TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 207 (340)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE
T ss_pred CCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce
Confidence 88889999999999999999999999999765433211 11 34455566
Q ss_pred EeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeee---------eecccccc----------------
Q psy10662 123 ESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------FDTVRSML---------------- 177 (221)
Q Consensus 123 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~---------~~~~~~~~---------------- 177 (221)
...+.+|...|++++|+|++++|++|+.|+.|++||+++.+.+..+. +.+.+..+
T Consensus 208 ~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 208 KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCC
Confidence 67778899999999999999999999999999999998877665443 11111000
Q ss_pred ---------cccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 178 ---------ERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 178 ---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
........|...|++++|+|+|++|++|+.||.|++||+.+|+
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 288 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 0011234678899999999999999999999999999999885
No 29
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.8e-37 Score=232.26 Aligned_cols=205 Identities=15% Similarity=0.222 Sum_probs=173.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++|++|+.||.|++||+. .++....+.+|.+.|.+++|+|+ ..|++++.|+.|++||+++++.+..+.+|...|.
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~ 185 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSN-FNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVT 185 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTT-SCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEE
T ss_pred cCCCEEEEEECCCCEEEEeCC-CcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEE
Confidence 588999999999999999998 67777777889999999999985 5699999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE-----------EeeCceEEEEEecCCCEEEEe
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV-----------GHINDKNFVGLATDGDYVACG 148 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~ 148 (221)
+++|+|+++++++++.|+.|++||+++++.+..+.........+..+. .+...+.+++|+|++++|+++
T Consensus 186 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (420)
T 3vl1_A 186 DIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG 265 (420)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE
Confidence 999999999999999999999999999998887743221111111111 124567778889999999999
Q ss_pred cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECCccc
Q psy10662 149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~ 220 (221)
+.||.|++||+++++....+. ..|...|.+++|+|+++ +|++++.||.|++||+.+++
T Consensus 266 ~~dg~i~i~d~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 266 HVSGVITVHNVFSKEQTIQLP--------------SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp ETTSCEEEEETTTCCEEEEEC--------------CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred cCCCeEEEEECCCCceeEEcc--------------cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 999999999998877654442 25778899999999999 99999999999999998753
No 30
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.3e-37 Score=228.73 Aligned_cols=198 Identities=18% Similarity=0.290 Sum_probs=156.3
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-----------------------------------
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK----------------------------------- 45 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------------------------------- 45 (221)
|++++|++|+.||+|+|||+. +++....+..|...|.+++|+|+
T Consensus 76 p~~~~l~s~s~D~~v~iWd~~-~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~ 154 (380)
T 3iz6_a 76 PEKNWIVSASQDGRLIVWNAL-TSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLT 154 (380)
T ss_dssp TTSSCEEEEETTSEEEEEETT-TTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCC
T ss_pred CCCCEEEEEeCCCeEEEEECC-CCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeecc
Confidence 689999999999999999997 66666777766666666666542
Q ss_pred ----------------CcEEEecCCCcEEEEEcCCCccceee-----eccccceeEEEEeC-CCCEEEEecCCCeEEEEE
Q psy10662 46 ----------------EDIVSASTDSQLKLWNINKPNCLRSF-----VGHINDKNFVGLAT-DGDYVACGSENNSLYIYY 103 (221)
Q Consensus 46 ----------------~~l~s~~~d~~v~~wd~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd 103 (221)
..|++++.|++|++||+++++.+..+ .+|...|.+++|+| +++++++|+.|+.|++||
T Consensus 155 gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd 234 (380)
T 3iz6_a 155 GHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWD 234 (380)
T ss_dssp CCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEE
T ss_pred CCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEE
Confidence 23666666777777777666665554 46788899999977 788999999999999999
Q ss_pred CCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccc
Q psy10662 104 KGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRN 182 (221)
Q Consensus 104 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 182 (221)
++.. +.+. .+.+|...|.+++|+|++++|++|+.|+.|++||++++..+..+..... .
T Consensus 235 ~~~~~~~~~-------------~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~--------~ 293 (380)
T 3iz6_a 235 LRITSRAVR-------------TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPD--------R 293 (380)
T ss_dssp TTTTCCCCE-------------EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCS--------S
T ss_pred CCCCCcceE-------------EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccc--------c
Confidence 9743 4333 3578999999999999999999999999999999999887766542211 1
Q ss_pred ccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 183 EDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 183 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
...+...|.+++|+|+|++|++|+.||.|++||+.+++
T Consensus 294 ~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 294 NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC
T ss_pred cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc
Confidence 11234468999999999999999999999999987653
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-37 Score=223.01 Aligned_cols=194 Identities=19% Similarity=0.203 Sum_probs=153.1
Q ss_pred ceEEEEeCCCeEEEEEecCC-ceeeEEE-Ee-ccCceEEEEEecC-CcEEEecCCCcEEEEEcCC-------Cccceeee
Q psy10662 4 CHLAFGSADHCVHYYDLRNT-KEALAVF-KG-HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINK-------PNCLRSFV 72 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~-~~~~~~~-~~-~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~-------~~~~~~~~ 72 (221)
.+||+|+.|+.|++||+... ......+ .. |...|.+++|+|+ ..|++++.|++|++||++. .+.+..+.
T Consensus 25 ~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 104 (330)
T 2hes_X 25 GILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE 104 (330)
T ss_dssp TEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC
T ss_pred CEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc
Confidence 48999999999999999732 2445555 34 9999999999985 5588999999999999853 34556678
Q ss_pred ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662 73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN 152 (221)
Q Consensus 73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 152 (221)
+|...|.+++|+|++++|++++.|+.|++||++.... ....+..+.+|...|.+++|+|++++|++++.|+
T Consensus 105 ~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~---------~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 175 (330)
T 2hes_X 105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE---------EYECISVLQEHSQDVKHVIWHPSEALLASSSYDD 175 (330)
T ss_dssp ----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC---------CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC---------CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 8999999999999999999999999999999953211 0112334578999999999999999999999999
Q ss_pred eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC--CcEEEEecCCCeEEEEECCcc
Q psy10662 153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL--SRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~ 219 (221)
.|++||...+... ....+.+|...|.+++|+|+ +.+|++++.|+.|++|++.++
T Consensus 176 ~i~iW~~~~~~~~-------------~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 176 TVRIWKDYDDDWE-------------CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp CEEEEEEETTEEE-------------EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred eEEEEECCCCCee-------------EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 9999998654211 11233478899999999998 778999999999999998653
No 32
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-37 Score=238.81 Aligned_cols=190 Identities=12% Similarity=0.083 Sum_probs=161.0
Q ss_pred CCceEEEEeCCCeEEEEEecCCc----------eeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCc-ccee
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTK----------EALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN-CLRS 70 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~-~~~~ 70 (221)
++.+||+|+.||+|++||+.... ++...+.+|...|++++|++++.|++|+.||+|++||+++++ +...
T Consensus 224 ~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~ 303 (524)
T 2j04_B 224 LVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFY 303 (524)
T ss_dssp SSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEE
T ss_pred CCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEE
Confidence 36799999999999999997321 123467889999999999987889999999999999998764 4456
Q ss_pred eeccccceeEE--EEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC--ceEEEEEecCCCEE
Q psy10662 71 FVGHINDKNFV--GLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN--DKNFVGLATDGDYV 145 (221)
Q Consensus 71 ~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l 145 (221)
+.+|...|.++ .|+|++ .+|++++.|++|++||+++++.+..+ .+|.. .+.+++|+|+++.+
T Consensus 304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~-------------~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT-------------VSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE-------------EEECSCCSCCCEEEETTTTEE
T ss_pred eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc-------------ccccccCcccceEeCCCcCeE
Confidence 78899999999 578887 89999999999999999887665443 44543 47889999999999
Q ss_pred EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
++++.|+.|++||++++..+..+. +|...|++++|+|+|++|++|+.||+|++|++..+
T Consensus 371 ~s~~~d~tv~lwd~~~~~~~~~l~---------------gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAAFAVHPLV---------------SRETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EEECSSSEEEEEETTCTTCCEEEE---------------ECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred EEeCCCCcEEEEECcccccceeee---------------cCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 999999999999998876654443 68899999999999999999999999999998654
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.1e-36 Score=223.92 Aligned_cols=201 Identities=18% Similarity=0.256 Sum_probs=164.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCCccceee-------
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKPNCLRSF------- 71 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~~~~~~~------- 71 (221)
|++++|++|+.|+.|++||+. +++....+. +...+.+++|+| + ..+++++.|+.|++||+++++.+..+
T Consensus 175 p~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~ 252 (393)
T 1erj_A 175 PSGDKLVSGSGDRTVRIWDLR-TGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESG 252 (393)
T ss_dssp TTSSEEEEEETTSEEEEEETT-TTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------
T ss_pred CCCCEEEEecCCCcEEEEECC-CCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCC
Confidence 688999999999999999998 677766666 677899999997 4 56899999999999999998877665
Q ss_pred eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662 72 VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN 151 (221)
Q Consensus 72 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 151 (221)
.+|...|.+++|+|+++++++++.|+.|++||++......... ..........+.+|...|.+++|+|++++|++|+.|
T Consensus 253 ~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D 331 (393)
T 1erj_A 253 TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK-TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 331 (393)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc-CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC
Confidence 5688899999999999999999999999999998765432211 112233455677899999999999999999999999
Q ss_pred CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC------CCcEEEEecCCCeEEEEECCcc
Q psy10662 152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ------LSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
+.|++||+.+++.+..+. +|...|.+++|++ ++++|++|+.||.|++|+++..
T Consensus 332 ~~v~iwd~~~~~~~~~l~---------------~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 332 RGVLFWDKKSGNPLLMLQ---------------GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp SEEEEEETTTCCEEEEEE---------------CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CeEEEEECCCCeEEEEEC---------------CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 999999999887765553 7888999999986 6899999999999999998653
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=222.14 Aligned_cols=200 Identities=16% Similarity=0.210 Sum_probs=155.7
Q ss_pred CCCceEEEEeCCCeEEEEEecC------CceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC----ccce
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRN------TKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP----NCLR 69 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~------~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~----~~~~ 69 (221)
|++++|++|+.|+.|++||+.. ..+.+..+.+|...|.+++|+|+ .+|++++.|++|++||++.. +++.
T Consensus 68 p~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~ 147 (330)
T 2hes_X 68 PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECIS 147 (330)
T ss_dssp TTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEE
T ss_pred CCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEE
Confidence 6889999999999999999852 23566788899999999999985 56999999999999999532 4556
Q ss_pred eeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC--CCEEEE
Q psy10662 70 SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD--GDYVAC 147 (221)
Q Consensus 70 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~ 147 (221)
.+.+|...|.+++|+|++.+|++++.|+.|++||..++.. ..+..+.+|...|.+++|+|+ +.+|++
T Consensus 148 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~-----------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 216 (330)
T 2hes_X 148 VLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW-----------ECVAVLNGHEGTVWSSDFDKTEGVFRLCS 216 (330)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-----------EEEEEECCCSSCEEEEEECCSSSSCEEEE
T ss_pred EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe-----------eEEEEccCCCCcEEEEEecCCCCeeEEEE
Confidence 7788999999999999999999999999999999865521 123346789999999999998 678999
Q ss_pred ecCCCeEEEEEcCCCCceeeeeeeccccccccccccc-ccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED-DTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
++.|+.|++||+.......... ......+. .|...|.+++|++++ +|++++.||.|++|+..++
T Consensus 217 ~s~D~~v~iw~~~~~~~~~~~~-------~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 217 GSDDSTVRVWKYMGDDEDDQQE-------WVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EETTSCEEEEEEEEECTTSCEE-------EEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred EeCCCeEEEEEecCCCccccce-------eEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 9999999999986543211000 00111122 378899999999765 8999999999999998654
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.8e-36 Score=217.05 Aligned_cols=192 Identities=19% Similarity=0.341 Sum_probs=165.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++|++|+.||.|++||+. +++.+..+.+|...|.+++|+|+ ..+++++.|+.|++||+++++.+..+..|..+|.
T Consensus 75 ~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~ 153 (312)
T 4ery_A 75 SDSNLLVSASDDKTLKIWDVS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS 153 (312)
T ss_dssp TTSSEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred CCCCEEEEECCCCEEEEEECC-CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEE
Confidence 688999999999999999998 77888899999999999999984 5689999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
+++|+|+++++++++.|+.|++||+++++.+..+ ...+...+..++|+|++++|++++.|+.|++||+
T Consensus 154 ~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~ 221 (312)
T 4ery_A 154 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL------------IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 221 (312)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE------------CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE------------eccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 9999999999999999999999999988776553 2344567889999999999999999999999999
Q ss_pred CCCCceeeeeeeccccccccccccccccc---ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNE---FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
++++.+..+. +|.. .+......+++.+|++++.||.|++||+.+++
T Consensus 222 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 222 SKGKCLKTYT---------------GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp TTTEEEEEEC---------------SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred CCCcEEEEEE---------------ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 9887665543 2222 22233344688999999999999999998765
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.3e-38 Score=231.87 Aligned_cols=208 Identities=14% Similarity=0.129 Sum_probs=159.9
Q ss_pred CCCceEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCc---cceeeecc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPN---CLRSFVGH 74 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~---~~~~~~~~ 74 (221)
|++++|++|+.||.|++||+. ++ +.+..+.+|...|.+++|+|+ ..|++++.|+.|++||+.+++ ....+..|
T Consensus 21 ~~g~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~ 99 (377)
T 3dwl_C 21 SQRTEFVTTTATNQVELYEQD-GNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL 99 (377)
T ss_dssp SSSSEEECCCSSSCBCEEEEE-TTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCC
T ss_pred CCCCEEEEecCCCEEEEEEcc-CCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc
Confidence 689999999999999999998 45 777888899999999999984 679999999999999999877 56667789
Q ss_pred ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEE-eeCceEEEEEecCCCEEEEecCCCe
Q psy10662 75 INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG-HINDKNFVGLATDGDYVACGSENNS 153 (221)
Q Consensus 75 ~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~ 153 (221)
...|.+++|+|++++|++++.|+.|++||+++++... ....+.. |...|.+++|+|++++|++++.|+.
T Consensus 100 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~----------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 100 NRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW----------VSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp SSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC----------CCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred CCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce----------eeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 9999999999999999999999999999998776310 1122345 8899999999999999999999999
Q ss_pred EEEEEcCCCCceeeeeeeccc---ccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 154 LYIYYKGLSKHMHAYRFDTVR---SMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 154 i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
|++||+...+........... ........+ +|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 999999754422111100000 011122233 788899999999999999999999999999998764
No 37
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.6e-36 Score=234.59 Aligned_cols=182 Identities=21% Similarity=0.384 Sum_probs=161.3
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
||+++|++++.|+.|++||.. ++.+..+.+|...|++++|+|+ ..|++++.|+.|++||. +++.+..+.+|...|.
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~ 471 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVR 471 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTT--CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCCEEEEEeCC--CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEE
Confidence 689999999999999999964 6778889999999999999985 56889999999999996 5677788889999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
+++|+|++++|++++.|+.|++||. +++.+.. +.+|...|++++|+|++++|++++.||.|++||.
T Consensus 472 ~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~-------------~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 472 GVAFSPDGQTIASASDDKTVKLWNR-NGQLLQT-------------LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEET-TSCEEEE-------------EECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEE-------------EeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 9999999999999999999999995 4554443 5789999999999999999999999999999995
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV 215 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~ 215 (221)
+++.+..+ .+|...|++++|+|||++|++++.|+.|++||
T Consensus 538 -~~~~~~~~---------------~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 538 -NGQLLQTL---------------TGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp -TSCEEEEE---------------ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -CCCEEEEE---------------cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 44444433 37899999999999999999999999999997
No 38
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.9e-36 Score=215.71 Aligned_cols=197 Identities=17% Similarity=0.167 Sum_probs=159.1
Q ss_pred CCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCcc--ceeeeccc
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPNC--LRSFVGHI 75 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~~--~~~~~~~~ 75 (221)
++++|++|+.||+|++||+.+.. ..+..+..|...|.+++|+| +..|++++.|+.|++||++++.. ...+.+|.
T Consensus 66 ~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~ 145 (297)
T 2pm7_B 66 FGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (297)
T ss_dssp GCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS
T ss_pred cCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc
Confidence 37899999999999999998322 35667788999999999997 45699999999999999987632 34567899
Q ss_pred cceeEEEEeCC-------------CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662 76 NDKNFVGLATD-------------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG 142 (221)
Q Consensus 76 ~~v~~~~~~~~-------------~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 142 (221)
..|.+++|+|+ +++|++++.|+.|++||+++++.... ....+.+|...|.+++|+|++
T Consensus 146 ~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~---------~~~~l~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV---------LESTLEGHSDWVRDVAWSPTV 216 (297)
T ss_dssp SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEE---------EEEEECCCSSCEEEEEECCCC
T ss_pred CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEE---------EEEEecCCCCceEEEEECCCC
Confidence 99999999997 46899999999999999876542211 223467899999999999984
Q ss_pred ---CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 143 ---DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 143 ---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
++|++++.|+.|++||++......... ......|...|.+++|+|+|++|++++.||.|++|+..
T Consensus 217 ~~~~~las~s~D~~v~iWd~~~~~~~~~~~----------~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIWTQDNEQGPWKKT----------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SSSEEEEEEETTSCEEEEEESSTTSCCEEE----------ESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCceEEEEEECCCcEEEEEeCCCCCcccee----------eeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 899999999999999987643211000 00113567789999999999999999999999999986
No 39
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.3e-35 Score=232.97 Aligned_cols=203 Identities=14% Similarity=0.126 Sum_probs=172.9
Q ss_pred CCCc-eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeee------
Q psy10662 1 MNSC-HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFV------ 72 (221)
Q Consensus 1 ~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~------ 72 (221)
|++. +|++|+.|+.|++||.. ..+....+.+|...|.+++|+|+ ..|++++.|++|++||+.+++.+..+.
T Consensus 157 p~~~~~l~s~s~D~~v~lwd~~-~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~ 235 (611)
T 1nr0_A 157 PSRPFRIISGSDDNTVAIFEGP-PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 235 (611)
T ss_dssp SSSSCEEEEEETTSCEEEEETT-TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSS
T ss_pred CCCCeEEEEEeCCCeEEEEECC-CCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccc
Confidence 4555 69999999999999987 67888899999999999999985 458999999999999999988877773
Q ss_pred -ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe------------------------------ecccce
Q psy10662 73 -GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF------------------------------DTVRSM 121 (221)
Q Consensus 73 -~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~------------------------------~~~~~~ 121 (221)
+|.+.|.+++|+|++++|++++.|++|++||+++++.+..+.. +.....
T Consensus 236 ~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~ 315 (611)
T 1nr0_A 236 VAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGS 315 (611)
T ss_dssp CSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTE
T ss_pred cccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCC
Confidence 7999999999999999999999999999999999988776532 222333
Q ss_pred eEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE
Q psy10662 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV 201 (221)
Q Consensus 122 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 201 (221)
....+.+|...|.+++|+|++++|++++.|+.|++||+.++.....+ ..+|...|.+++|++++ .
T Consensus 316 ~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~--------------~~~h~~~v~~~~~s~~~-~ 380 (611)
T 1nr0_A 316 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVF--------------PDVHATMITGIKTTSKG-D 380 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECS--------------SCSCSSCEEEEEECTTS-C
T ss_pred cceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeec--------------ccCCcceEEEEEECCCC-c
Confidence 45566789999999999999999999999999999999877653322 13578899999999876 6
Q ss_pred EEEecCCCeEEEEECCcc
Q psy10662 202 LVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 202 l~~~~~dg~i~iw~~~~~ 219 (221)
|++++.|+.+++|++.++
T Consensus 381 l~s~s~d~~v~~w~~~~~ 398 (611)
T 1nr0_A 381 LFTVSWDDHLKVVPAGGS 398 (611)
T ss_dssp EEEEETTTEEEEECSSSS
T ss_pred EEEEEcCCceEEeecCCc
Confidence 788899999999998754
No 40
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.6e-36 Score=238.25 Aligned_cols=193 Identities=17% Similarity=0.219 Sum_probs=166.1
Q ss_pred CceEEEEeCCCeEEEEEecCC----ceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNT----KEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~----~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
+++|++|+.|+.|++|++... +.....+.+|...|.+++|+|+ ..|++|+.|++|++||+.+++.+..+.+|...
T Consensus 395 ~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 395 ADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD 474 (694)
T ss_dssp CSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred CCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC
Confidence 578999999999999999732 2456678899999999999975 56899999999999999999999999999999
Q ss_pred eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC--CEEEEecCCCeEE
Q psy10662 78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG--DYVACGSENNSLY 155 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~ 155 (221)
|.+++|+|++++|++++.|+.|++||+......... ....+|...|.+++|+|++ ..+++++.|+.|+
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~----------~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS----------EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC----------SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec----------cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 999999999999999999999999998654332111 1123678889999999986 5899999999999
Q ss_pred EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+||+++.+....+ .+|...|++++|+|++++|++++.||.|++||+.+++
T Consensus 545 vwd~~~~~~~~~~---------------~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 545 VWNLSNCKLRSTL---------------AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp EEETTTCCEEEEE---------------CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred EEECCCCcEEEEE---------------cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999887665444 3788899999999999999999999999999998764
No 41
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.1e-35 Score=223.89 Aligned_cols=201 Identities=19% Similarity=0.280 Sum_probs=177.1
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV 81 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~ 81 (221)
++++|++|+.||.|++||+. +++.+..+.+|.+.|.+++|+|++.+++++.||+|++||+++++.+..+.+|...|.++
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~-~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l 209 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSI-NKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL 209 (464)
T ss_dssp ETTEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECC-CCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEE
Confidence 57899999999999999998 78889999999999999999988899999999999999999999999999999999999
Q ss_pred EEe--CCCCEEEEecCCCeEEEEECCCCeeeEE-----------------------E-----------------------
Q psy10662 82 GLA--TDGDYVACGSENNSLYIYYKGLSKHMHA-----------------------Y----------------------- 113 (221)
Q Consensus 82 ~~~--~~~~~l~~~~~d~~v~iwd~~~~~~~~~-----------------------~----------------------- 113 (221)
+|+ +++.++++++.|+.|++||+++.+.... +
T Consensus 210 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 289 (464)
T 3v7d_B 210 DIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD 289 (464)
T ss_dssp EEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT
T ss_pred EEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC
Confidence 998 5778999999999999999987653211 0
Q ss_pred ----EeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662 114 ----RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF 189 (221)
Q Consensus 114 ----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (221)
-|+......+..+.+|...+.+++|+|+++++++|+.||.|++||+++++.+..+. +|...
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~---------------~h~~~ 354 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ---------------GHTAL 354 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC---------------CCSSC
T ss_pred CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe---------------CCCCc
Confidence 05556667777888899999999999999999999999999999999887665553 68889
Q ss_pred eeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 190 VSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 190 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
|.+++|+ +++|++++.||.|++||+.+++
T Consensus 355 v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 355 VGLLRLS--DKFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp EEEEEEC--SSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEEc--CCEEEEEeCCCcEEEEECCCCc
Confidence 9999997 5899999999999999998753
No 42
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.3e-35 Score=217.70 Aligned_cols=204 Identities=17% Similarity=0.226 Sum_probs=168.4
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCCccceee---eccccc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKPNCLRSF---VGHIND 77 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~~~~~~~---~~~~~~ 77 (221)
+.+|++|+.||.|++||+. +++.+..+.+|...|.+++|+| + ..|++++.||.|++||+++++.+..+ ..|...
T Consensus 85 ~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPI-TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp CEEEEEEETTCEEEEECTT-TCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred CCEEEEecCCCEEEEEEch-hceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 6799999999999999998 6788889999999999999998 4 45889999999999999999888877 679999
Q ss_pred eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeE--------------------------------------EE------
Q psy10662 78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH--------------------------------------AY------ 113 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--------------------------------------~~------ 113 (221)
|.+++|+|+++++++++.|+.|++||+++++... .+
T Consensus 164 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 243 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDL 243 (366)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTE
T ss_pred eeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCE
Confidence 9999999999999999999999999998653221 01
Q ss_pred -----------Eeecccc--------------eeEeeEEEeeCceEEEEEecC--CCEEEEecCCCeEEEEEcCCCCcee
Q psy10662 114 -----------RFDTVRS--------------MLESSFVGHINDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMH 166 (221)
Q Consensus 114 -----------~~~~~~~--------------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~ 166 (221)
-|+.... .....+..|...+.+++|+|+ +++|++++.||.|++||+.+++...
T Consensus 244 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 244 ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHK 323 (366)
T ss_dssp EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGG
T ss_pred EEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcc
Confidence 0222221 335666778888999999999 9999999999999999998876543
Q ss_pred eeeeeccccccccccccccc--ccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 167 AYRFDTVRSMLERDRNEDDT--NEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
... ..+..| ...|.+++|+|++++|++++.||.|++||+.+
T Consensus 324 ~~~-----------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 324 AKC-----------TTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CEE-----------EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred ccc-----------eEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 111 011234 68899999999999999999999999999864
No 43
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-36 Score=228.88 Aligned_cols=193 Identities=12% Similarity=0.108 Sum_probs=156.1
Q ss_pred CCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeee--cccc
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFV--GHIN 76 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~--~~~~ 76 (221)
++++||+|+.||.|+|||+.... .....+.+|.+.|++|+|+| +..|++++.||+|++||+++........ .+..
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~ 210 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINI 210 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSC
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCc
Confidence 56799999999999999997322 23344568999999999997 4579999999999999997654433322 2334
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EEEEecCCCeEE
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YVACGSENNSLY 155 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~ 155 (221)
.+.+++|+|++.+|++|+.||.|++||++.. .+ ..+.+|...|.+++|+|++. ++++++.|+.|+
T Consensus 211 ~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~-------------~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 211 WFCSLDVSASSRMVVTGDNVGNVILLNMDGK-EL-------------WNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp CCCCEEEETTTTEEEEECSSSBEEEEESSSC-BC-------------CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEeeeccCcc-ee-------------EEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 6789999999999999999999999998643 22 23568899999999999876 788999999999
Q ss_pred EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+||+++.+....+ ....+|...|++++|+|+|++|++++.||.|++|++.++.
T Consensus 277 iwd~~~~~~~~~~------------~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 277 IWDLRQVRGKASF------------LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp EEETTTCCSSSCC------------SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred EEecccccccceE------------EEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 9999876543222 1224688899999999999999999999999999998754
No 44
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.9e-35 Score=220.77 Aligned_cols=219 Identities=10% Similarity=0.097 Sum_probs=168.4
Q ss_pred CCCce-EEEEeCCCeEEEEEecCC------ceeeE-----EEEe-------ccCceEEEEEecCCcEEEecCCCcEEEEE
Q psy10662 1 MNSCH-LAFGSADHCVHYYDLRNT------KEALA-----VFKG-------HRKAVSYVKFLNKEDIVSASTDSQLKLWN 61 (221)
Q Consensus 1 ~~~~~-l~~~~~dg~i~i~~~~~~------~~~~~-----~~~~-------~~~~i~~~~~~~~~~l~s~~~d~~v~~wd 61 (221)
|++++ |++|+.||.|++||+. . .+.+. .+.+ |...|.+++|+|++.+++++.|+.|++||
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFH-PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISE 213 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEE-SSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCC-ccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEE
Confidence 46788 9999999999999998 4 44555 6644 88999999999855888999999999999
Q ss_pred cCCCccceeeec---c---ccceeEEEEeCCCCEEEEecCC---CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc
Q psy10662 62 INKPNCLRSFVG---H---INDKNFVGLATDGDYVACGSEN---NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND 132 (221)
Q Consensus 62 ~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (221)
+++++.+..+.. | ...|.+++|+|++++|++++.| +.|++||+++++.+..+...............|...
T Consensus 214 ~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 214 LSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp TTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC
T ss_pred CCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc
Confidence 999999988888 8 8999999999999999999999 999999999888776652100000000001118889
Q ss_pred eEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccc------ccccccccccccccceeEEEEcCCC-------
Q psy10662 133 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVR------SMLERDRNEDDTNEFVSAVCWRQLS------- 199 (221)
Q Consensus 133 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~------- 199 (221)
|.+++|+|++++|++++.||.|++||+++++.+..+...... ...........|...|.+++|+|++
T Consensus 294 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~ 373 (397)
T 1sq9_A 294 VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 373 (397)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccc
Confidence 999999999999999999999999999998877766521100 0000011112348899999999998
Q ss_pred ---cEEEEecCCCeEEEEECCccc
Q psy10662 200 ---RVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 200 ---~~l~~~~~dg~i~iw~~~~~~ 220 (221)
++|++++.||.|++|++.+|+
T Consensus 374 ~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 374 DLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998874
No 45
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-34 Score=216.25 Aligned_cols=204 Identities=15% Similarity=0.181 Sum_probs=170.9
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcC-CCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNIN-KPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~-~~~~~~~~~~~~~~v~ 79 (221)
|++++|++|+.||.|++||+. +++.+..+..|...|.+++|+ +..+++++.||.|++||++ ....+..+..|...|.
T Consensus 144 ~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 221 (401)
T 4aez_A 144 HDGSFLSVGLGNGLVDIYDVE-SQTKLRTMAGHQARVGCLSWN-RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC 221 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETT-TCCEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred CCCCEEEEECCCCeEEEEECc-CCeEEEEecCCCCceEEEEEC-CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCee
Confidence 688999999999999999998 678888999999999999995 4689999999999999998 4566777888999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE--------------------------------eecccceeEeeEE
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------------------FDTVRSMLESSFV 127 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~ 127 (221)
+++|+|++.++++++.|+.|++||+++++.+..+. |+.........+
T Consensus 222 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~- 300 (401)
T 4aez_A 222 GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV- 300 (401)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE-
T ss_pred EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE-
Confidence 99999999999999999999999999887766553 222222233333
Q ss_pred EeeCceEEEEEecCCCEEEE--ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662 128 GHINDKNFVGLATDGDYVAC--GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA 205 (221)
Q Consensus 128 ~~~~~v~~~~~~~~~~~l~~--~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 205 (221)
.+...+.+++|+|+++++++ |+.||.|++||+.++....... +.+|...|.+++|+|++++|+++
T Consensus 301 ~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~-------------~~~h~~~v~~~~~s~dg~~l~s~ 367 (401)
T 4aez_A 301 DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVD-------------IPAHDTRVLYSALSPDGRILSTA 367 (401)
T ss_dssp ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEE-------------EECCSSCCCEEEECTTSSEEEEE
T ss_pred eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEE-------------ecCCCCCEEEEEECCCCCEEEEE
Confidence 35677999999999999998 5589999999998765444332 23678899999999999999999
Q ss_pred cCCCeEEEEECCccc
Q psy10662 206 NSQGIIKIYVIPIRV 220 (221)
Q Consensus 206 ~~dg~i~iw~~~~~~ 220 (221)
+.||.|++|++.+++
T Consensus 368 ~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 368 ASDENLKFWRVYDGD 382 (401)
T ss_dssp CTTSEEEEEECCC--
T ss_pred eCCCcEEEEECCCCc
Confidence 999999999998765
No 46
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-35 Score=217.28 Aligned_cols=197 Identities=15% Similarity=0.201 Sum_probs=168.5
Q ss_pred CCCceEEEEeCCCeEEEEEecC-CceeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCc--cceeeecc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRN-TKEALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPN--CLRSFVGH 74 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~ 74 (221)
|++++|++|+.||.|++||+.. ..+.+..+.+|...|++++|++ +..|++++.||.|++||+++++ .+..+..|
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 100 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH 100 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCC
Confidence 6899999999999999999973 3466778889999999999974 5679999999999999999886 66777789
Q ss_pred ccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec------------
Q psy10662 75 INDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT------------ 140 (221)
Q Consensus 75 ~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------ 140 (221)
...|.+++|+|+ +.++++++.|+.|++||++..+.... ..+..|...+.+++|+|
T Consensus 101 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 169 (379)
T 3jrp_A 101 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-----------IIIDAHAIGVNSASWAPATIEEDGEHNGT 169 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE-----------EEEECCTTCEEEEEECCCC----------
T ss_pred CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee-----------EEecCCCCceEEEEEcCccccccccccCC
Confidence 999999999999 89999999999999999987644322 23467888999999999
Q ss_pred -CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC---CcEEEEecCCCeEEEEEC
Q psy10662 141 -DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL---SRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 141 -~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iw~~ 216 (221)
++.++++++.|+.|++||+++........ ..+.+|...|.+++|+|+ +++|++++.||.|++|++
T Consensus 170 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----------~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 170 KESRKFVTGGADNLVKIWKYNSDAQTYVLE-----------STLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp CTTCEEEEEETTSCEEEEEEETTTTEEEEE-----------EEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEEecCCCcceeeE-----------EEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 69999999999999999998765432221 123468889999999999 899999999999999999
Q ss_pred Ccc
Q psy10662 217 PIR 219 (221)
Q Consensus 217 ~~~ 219 (221)
.++
T Consensus 239 ~~~ 241 (379)
T 3jrp_A 239 DNE 241 (379)
T ss_dssp SST
T ss_pred CCC
Confidence 875
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-36 Score=229.91 Aligned_cols=204 Identities=13% Similarity=0.130 Sum_probs=161.2
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEE--EEecC--CcEEEecCCCcEEEEEcCCCccceeeecccc--
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYV--KFLNK--EDIVSASTDSQLKLWNINKPNCLRSFVGHIN-- 76 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~--~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~-- 76 (221)
+..|++|+.||+|++||+.....+...+.+|...|.++ +|+|+ ..|++++.|++|++||++++++...+.+|..
T Consensus 277 ~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~ 356 (524)
T 2j04_B 277 PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS 356 (524)
T ss_dssp SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC
T ss_pred CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC
Confidence 35799999999999999984445566788999999999 45664 4689999999999999999888887777754
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI 156 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 156 (221)
.|.+++|+|++..+++++.|+.|++||+++++.+.. +.+|...|++++|+|++++|++|+.||.|++
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~-------------l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~l 423 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHP-------------LVSRETTITAIGVSRLHPMVLAGSADGSLII 423 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEE-------------EEECSSCEEEEECCSSCCBCEEEETTTEEEC
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECccccccee-------------eecCCCceEEEEeCCCCCeEEEEECCCEEEE
Confidence 488999999999999999999999999998776544 4689999999999999999999999999999
Q ss_pred EEcCCCCc--------------eeeeeeecccc---------------cccccccccccccceeEEEEcCCCc---EEEE
Q psy10662 157 YYKGLSKH--------------MHAYRFDTVRS---------------MLERDRNEDDTNEFVSAVCWRQLSR---VLVA 204 (221)
Q Consensus 157 ~d~~~~~~--------------~~~~~~~~~~~---------------~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~ 204 (221)
||+..... +..+.+.+.+. .......+.+|...|.+++|+|++. +|++
T Consensus 424 wd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAs 503 (524)
T 2j04_B 424 TNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAF 503 (524)
T ss_dssp CBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEE
T ss_pred EechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHh
Confidence 99754211 11233333221 0122345667899999999999954 9999
Q ss_pred ecCCCeEEEEECCcc
Q psy10662 205 ANSQGIIKIYVIPIR 219 (221)
Q Consensus 205 ~~~dg~i~iw~~~~~ 219 (221)
|+.||.|+||++...
T Consensus 504 g~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 504 SNSAGLLTLEYLSLE 518 (524)
T ss_dssp ECTTSEEEEEECSCC
T ss_pred hccCceEEEEEcccc
Confidence 999999999999753
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.1e-34 Score=209.46 Aligned_cols=189 Identities=14% Similarity=0.287 Sum_probs=167.3
Q ss_pred CCCceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
|++++|++++.||.|++||+. .++ ....+..|...|.+++|+|+ ..+++++.|+.|++||+++++.+..+..|...
T Consensus 107 ~~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~ 185 (337)
T 1gxr_A 107 PDGCTLIVGGEASTLSIWDLA-APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG 185 (337)
T ss_dssp TTSSEEEEEESSSEEEEEECC-CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCCEEEEEcCCCcEEEEECC-CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCc
Confidence 678999999999999999998 444 56677889999999999985 56889999999999999999999999889999
Q ss_pred eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662 78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 157 (221)
+.+++|+|+++++++++.|+.|++||+++++.+..+ .+...+.+++|+|+++++++++.++.|++|
T Consensus 186 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~--------------~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~ 251 (337)
T 1gxr_A 186 ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH--------------DFTSQIFSLGYCPTGEWLAVGMESSNVEVL 251 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--------------ECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee--------------cCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence 999999999999999999999999999988876543 456789999999999999999999999999
Q ss_pred EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
|++..+... ...|...|.+++|+|++++|++++.||.|++|++++++
T Consensus 252 ~~~~~~~~~----------------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 252 HVNKPDKYQ----------------LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp ETTSSCEEE----------------ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ECCCCCeEE----------------EcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 998765321 12577889999999999999999999999999998764
No 49
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-35 Score=215.19 Aligned_cols=201 Identities=15% Similarity=0.195 Sum_probs=170.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++|++|+.||.|++||+. +++.+..+.+|...|.+++|+| +..|++++.||.|++||+.+++.+..+. +...+.
T Consensus 42 ~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~ 119 (369)
T 3zwl_B 42 KEGDLLFSCSKDSSASVWYSL-NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVK 119 (369)
T ss_dssp TTSCEEEEEESSSCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEE
T ss_pred CCCCEEEEEeCCCEEEEEeCC-CchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeE
Confidence 689999999999999999998 7788899999999999999997 4569999999999999999999888887 888999
Q ss_pred EEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC--ceEEEEEecCCCEEEEecCCC
Q psy10662 80 FVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN--DKNFVGLATDGDYVACGSENN 152 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~ 152 (221)
+++|+|+++++++++.+ +.|.+||+...+....+.. ........+..+.. .+.+++|+|+++++++++.||
T Consensus 120 ~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 197 (369)
T 3zwl_B 120 RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK--VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG 197 (369)
T ss_dssp EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE--ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS
T ss_pred EEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc--cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC
Confidence 99999999999999998 9999999876654333211 11122233455555 899999999999999999999
Q ss_pred eEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 153 SLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 153 ~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.|++||+++ ......+. .|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 198 ~i~i~d~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSID---------------LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEEEEETTTTTEEEEEEE---------------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEECCCCcEeEEEEe---------------cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCc
Confidence 999999987 44444332 577889999999999999999999999999998764
No 50
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.3e-34 Score=224.45 Aligned_cols=185 Identities=20% Similarity=0.361 Sum_probs=162.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++|++|+.||.|++||.. ++.+..+.+|...|.+++|+|+ ..|++++.|+.|++||. +++.+..+.+|...|.
T Consensus 354 ~~g~~l~~~~~dg~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~ 430 (577)
T 2ymu_A 354 PDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVW 430 (577)
T ss_dssp TTSSEEEEEETTSEEEEEETT--CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCCEEEEEcCC--CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeE
Confidence 689999999999999999964 6778889999999999999975 56899999999999995 6677888889999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
+++|+|+++++++++.|+.|++||.. ++.+. .+.+|...|.+++|+|++++|++++.|+.|++||.
T Consensus 431 ~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~-------------~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~ 496 (577)
T 2ymu_A 431 GVAFSPDDQTIASASDDKTVKLWNRN-GQLLQ-------------TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 496 (577)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETT-SCEEE-------------EEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECC-CCEEE-------------EEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC
Confidence 99999999999999999999999964 33333 35788999999999999999999999999999995
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
+++.+..+ .+|...|++++|+|+|++|++++.||.|++||...
T Consensus 497 -~~~~~~~~---------------~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 497 -NGQLLQTL---------------TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp -TSCEEEEE---------------ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred -CCCEEEEE---------------eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 44444443 36888999999999999999999999999999754
No 51
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3e-34 Score=213.51 Aligned_cols=192 Identities=14% Similarity=0.158 Sum_probs=158.4
Q ss_pred CCC-ceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCCccceeeecc-
Q psy10662 1 MNS-CHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKPNCLRSFVGH- 74 (221)
Q Consensus 1 ~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~- 74 (221)
|++ ++|++|+.||.|++||+. +++....+. +|...|.+++|+| + ..|++++.|+.|++||+++ +.+..+..+
T Consensus 83 ~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~ 160 (383)
T 3ei3_B 83 PTHPTTVAVGSKGGDIILWDYD-VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTD 160 (383)
T ss_dssp SSCTTEEEEEEBTSCEEEEETT-STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCC
T ss_pred CCCCCEEEEEcCCCeEEEEeCC-CcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccC
Confidence 566 899999999999999998 555555554 6999999999998 3 5699999999999999986 444455433
Q ss_pred --ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EEEEecCC
Q psy10662 75 --INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YVACGSEN 151 (221)
Q Consensus 75 --~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d 151 (221)
...|.+++|+|+++++++++.|+.|++||++ ++.+.. +.+|...|.+++|+|+++ ++++++.|
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~-------------~~~h~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFK-------------EKLHKAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEE-------------EECSSSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEE-------------eccCCCcEEEEEECCCCCCEEEEEeCC
Confidence 4789999999999999999999999999984 444433 467889999999999999 99999999
Q ss_pred CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEecCCCeEEEEECCccc
Q psy10662 152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+.|++||+++.+...... .. .+|...|.+++|+| ++++|++++.|+.|++||+.+++
T Consensus 227 ~~i~iwd~~~~~~~~~~~-----------~~-~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 227 ATVKLWDLRNIKDKNSYI-----------AE-MPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp SEEEEEEGGGCCSTTCEE-----------EE-EECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred CEEEEEeCCCCCcccceE-----------EE-ecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 999999998743211110 01 14778999999999 99999999999999999998754
No 52
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.9e-35 Score=214.75 Aligned_cols=195 Identities=17% Similarity=0.129 Sum_probs=156.8
Q ss_pred CCceEEEEeCCCeEEEEEecCCc-eeeEEEEeccCceEEEEEecC---CcEEEecCCCcEEEEEcCCCcc---ceeeecc
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNK---EDIVSASTDSQLKLWNINKPNC---LRSFVGH 74 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~~---~~~~~~~ 74 (221)
++++|++|+.|++|++||+++.. +....+.+|...|.+++|+|+ ..|++++.|+.|++||++.+.. ...+.+|
T Consensus 70 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h 149 (316)
T 3bg1_A 70 YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAH 149 (316)
T ss_dssp GSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS
T ss_pred CCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc
Confidence 47899999999999999998322 456677889999999999974 4699999999999999987632 3445678
Q ss_pred ccceeEEEEeCC-----------------CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662 75 INDKNFVGLATD-----------------GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG 137 (221)
Q Consensus 75 ~~~v~~~~~~~~-----------------~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 137 (221)
...|.+++|+|+ +++|++++.|+.|++||++..... .....+.+|...|.+++
T Consensus 150 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~----------~~~~~l~~h~~~V~~v~ 219 (316)
T 3bg1_A 150 TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW----------KEEQKLEAHSDWVRDVA 219 (316)
T ss_dssp SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE----------EEEECCBCCSSCEEEEE
T ss_pred cCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc----------ceeeecccCCCceEEEE
Confidence 889999999997 468999999999999998754211 12234578999999999
Q ss_pred EecCC----CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEE
Q psy10662 138 LATDG----DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKI 213 (221)
Q Consensus 138 ~~~~~----~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 213 (221)
|+|++ ++|++++.|+.|++|+++...... .....+..|...|.+++|+|++++|++++.|+.|++
T Consensus 220 ~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~-----------~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~l 288 (316)
T 3bg1_A 220 WAPSIGLPTSTIASCSQDGRVFIWTCDDASSNT-----------WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTL 288 (316)
T ss_dssp CCCCSSCSCCEEEEEETTCEEEEEECSSTTCCC-----------CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEE
T ss_pred ecCCCCCCCceEEEEcCCCeEEEEEccCccccc-----------hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEE
Confidence 99986 789999999999999987632100 000011256788999999999999999999999999
Q ss_pred EECC
Q psy10662 214 YVIP 217 (221)
Q Consensus 214 w~~~ 217 (221)
|+..
T Consensus 289 w~~~ 292 (316)
T 3bg1_A 289 WKES 292 (316)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9975
No 53
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-34 Score=216.17 Aligned_cols=193 Identities=15% Similarity=0.207 Sum_probs=164.4
Q ss_pred CCceEEEEeCCCeEEEEEecCCc------eeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCccceee--
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTK------EALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPNCLRSF-- 71 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~------~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~~~~~~-- 71 (221)
++++|++|+.||.|++||+.... +++..+.+|...|.+++|+|+ ..|++++.|+.|++||+++++.+..+
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 172 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP 172 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence 78999999999999999998332 567889999999999999986 46899999999999999999998888
Q ss_pred eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc-eEEEEEecCCCEEEEe--
Q psy10662 72 VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND-KNFVGLATDGDYVACG-- 148 (221)
Q Consensus 72 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~-- 148 (221)
..|...|.+++|+|++++|++++.|+.|++||+++++.+..+ ...|... +.++.|+|+++++++|
T Consensus 173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~~g~~ 240 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEK------------DRPHEGTRPVHAVFVSEGKILTTGFS 240 (402)
T ss_dssp TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE------------ECSSCSSSCCEEEECSTTEEEEEEEC
T ss_pred CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeee------------ccCCCCCcceEEEEcCCCcEEEEecc
Confidence 789999999999999999999999999999999988876553 1345554 8899999999999999
Q ss_pred -cCCCeEEEEEcCCCCce-eeeeeecccccccccccccccccceeEEEEcCCCcEEE-EecCCCeEEEEECCccc
Q psy10662 149 -SENNSLYIYYKGLSKHM-HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV-AANSQGIIKIYVIPIRV 220 (221)
Q Consensus 149 -~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~ 220 (221)
+.|+.|++||+++.+.. .... ..+...+.+++|+|++++|+ +++.||.|++|++.+++
T Consensus 241 ~~~d~~i~iwd~~~~~~~~~~~~--------------~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 241 RMSERQVALWDTKHLEEPLSLQE--------------LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TTCCEEEEEEETTBCSSCSEEEE--------------CCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCCCceEEEEcCccccCCceEEe--------------ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 79999999999876542 1111 13556789999999999996 45579999999998764
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.4e-34 Score=212.85 Aligned_cols=210 Identities=14% Similarity=0.149 Sum_probs=165.7
Q ss_pred CCCceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCcccee--eeccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRS--FVGHI 75 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~--~~~~~ 75 (221)
|++++|++|+.||.|++||+. +++ .+..+.+|...|.+++|+|+ ..|++++.|+.|++||+++++.... +..|.
T Consensus 18 ~~~~~l~~~~~d~~v~i~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 96 (372)
T 1k8k_C 18 KDRTQIAICPNNHEVHIYEKS-GNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRIN 96 (372)
T ss_dssp TTSSEEEEECSSSEEEEEEEE-TTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCS
T ss_pred CCCCEEEEEeCCCEEEEEeCC-CCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCC
Confidence 689999999999999999998 555 78889999999999999974 5688999999999999988765443 35688
Q ss_pred cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662 76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY 155 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 155 (221)
..|.+++|+|+++++++++.|+.|++||++..+..... ......|...+.+++|+|++++|++++.||.|+
T Consensus 97 ~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 167 (372)
T 1k8k_C 97 RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC---------KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCR 167 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE---------EEECTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceee---------eeeecccCCCeeEEEEcCCCCEEEEEcCCCCEE
Confidence 89999999999999999999999999998876532211 111245678999999999999999999999999
Q ss_pred EEEcCCCCceeeee---eecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 156 IYYKGLSKHMHAYR---FDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 156 ~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+||++......... +............+..|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 168 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT
T ss_pred EEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 99975332111000 000000111222334688899999999999999999999999999998754
No 55
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.2e-34 Score=206.51 Aligned_cols=198 Identities=14% Similarity=0.205 Sum_probs=154.5
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeee--------
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFV-------- 72 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~-------- 72 (221)
++||+| .|++|+|||+. ++++++.+. .|...|++++|+|+ ..|++|+.||+|++||+++++.+..+.
T Consensus 37 ~~lAvg-~D~tV~iWd~~-tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~ 114 (318)
T 4ggc_A 37 NVLAVA-LDNSVYLWSAS-SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS 114 (318)
T ss_dssp SEEEEE-ETTEEEEEETT-TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CEEEEE-eCCEEEEEECC-CCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEE
Confidence 467776 59999999998 677777665 57788999999984 568999999999999998776544332
Q ss_pred ---------------------------------ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeee---------
Q psy10662 73 ---------------------------------GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHM--------- 110 (221)
Q Consensus 73 ---------------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--------- 110 (221)
+|...+..+.++++++++++++.|+.|++||+++++..
T Consensus 115 ~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 194 (318)
T 4ggc_A 115 LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ 194 (318)
T ss_dssp EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECC
T ss_pred eecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecc
Confidence 45666788888899999999999999999999865421
Q ss_pred -----EEEEe----------------------ecccceeEeeEEEeeCceEEEEEecCCCEEEEe--cCCCeEEEEEcCC
Q psy10662 111 -----HAYRF----------------------DTVRSMLESSFVGHINDKNFVGLATDGDYVACG--SENNSLYIYYKGL 161 (221)
Q Consensus 111 -----~~~~~----------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~~~d~~~ 161 (221)
....+ +..... ......+...+..+.|+|+++.++++ +.|+.|++||+++
T Consensus 195 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 195 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC-EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred cCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc-ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence 11111 111111 12233456678899999999887664 4799999999998
Q ss_pred CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
++.+..+. +|...|++++|+|+|++|++++.||+|++||+...
T Consensus 274 ~~~~~~l~---------------gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 274 MAKVAELK---------------GHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CCEEEEEC---------------CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred CcEEEEEc---------------CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 88776653 78999999999999999999999999999998653
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.2e-34 Score=228.15 Aligned_cols=189 Identities=23% Similarity=0.294 Sum_probs=161.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCcccee---eecccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRS---FVGHIN 76 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~---~~~~~~ 76 (221)
|++++|++|+.||.|+|||+. ++.....+.+|...|.+++|+| +..|++++.|++|++||+........ ..+|..
T Consensus 440 ~~g~~l~sgs~Dg~v~vwd~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~ 518 (694)
T 3dm0_A 440 SDGQFALSGSWDGELRLWDLA-AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD 518 (694)
T ss_dssp TTSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS
T ss_pred CCCCEEEEEeCCCcEEEEECC-CCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC
Confidence 689999999999999999998 7788889999999999999997 45699999999999999865433222 146888
Q ss_pred ceeEEEEeCCC--CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeE
Q psy10662 77 DKNFVGLATDG--DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSL 154 (221)
Q Consensus 77 ~v~~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 154 (221)
.|.+++|+|++ ..+++++.|+.|++||+++.+.... +.+|...|++++|+|++++|++|+.||.|
T Consensus 519 ~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~-------------~~~h~~~v~~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 519 WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRST-------------LAGHTGYVSTVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEE-------------ECCCSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred cEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEE-------------EcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 99999999987 5799999999999999988776544 47899999999999999999999999999
Q ss_pred EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
++||+++++.+..+. +...|.+++|+|++.+|++++ |+.|++||+.+++
T Consensus 586 ~iwd~~~~~~~~~~~----------------~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 586 LLWDLAEGKKLYSLE----------------ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKS 634 (694)
T ss_dssp EEEETTTTEEEECCB----------------CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTE
T ss_pred EEEECCCCceEEEec----------------CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCC
Confidence 999999887654432 345689999999999888775 5669999998764
No 57
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-35 Score=214.17 Aligned_cols=187 Identities=11% Similarity=0.062 Sum_probs=153.4
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcC---------CCccceeee
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNIN---------KPNCLRSFV 72 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~---------~~~~~~~~~ 72 (221)
++.+|++|+.||.|++||+. +++.+..+. ...|.++.|+|. +++++.|++|++|+.. +++.+..+.
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~-~~~~~~~~~--~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLK-DSKTITTIT--TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEEETTEEEEEEES-SSSCEEEEE--EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECC-CCcEEEEEe--cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence 57789999999999999998 666666666 466888888887 9999999999999765 344343332
Q ss_pred -ccccceeEEEEeC--CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662 73 -GHINDKNFVGLAT--DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS 149 (221)
Q Consensus 73 -~~~~~v~~~~~~~--~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 149 (221)
.|..+|.+++|+| +++++++++.||.|++||+++++..... ...+...+.+++|+|++++|++|+
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~------------~~~~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVH------------SAKSDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEE------------CCCSSCCCCEEEECTTSCEEEEEC
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEE------------ecCCCCceEEEEECCCCCEEEEEc
Confidence 5668899999999 9999999999999999999988775432 123455799999999999999999
Q ss_pred CCCeEEEEEcCCCCce-eeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 150 ENNSLYIYYKGLSKHM-HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 150 ~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.||.|++||+++++.. ..+. ..|...|.+++|+|+|.+|++++ |+.|++||+++++
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~--------------~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFP--------------VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECC--------------CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSST
T ss_pred CCCEEEEEECCCCCCCccEEe--------------ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCC
Confidence 9999999999887654 3332 13888999999999999999999 5599999998764
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.2e-33 Score=206.34 Aligned_cols=185 Identities=14% Similarity=0.201 Sum_probs=165.0
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++|++++.||.|++||+. +++.+..+..|...|.+++|+|+ ..+++++.|+.|++||+++++.+..+. +...+.
T Consensus 151 ~~~~~l~~~~~dg~v~~~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~ 228 (337)
T 1gxr_A 151 PDSKVCFSCCSDGNIAVWDLH-NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIF 228 (337)
T ss_dssp TTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEE
T ss_pred CCCCEEEEEeCCCcEEEEeCC-CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceE
Confidence 578999999999999999998 67888889999999999999975 568899999999999999998877764 778899
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
+++|+|+++++++++.++.|++||+++++.. .+..|...+.+++|+|++++|++++.||.|++||+
T Consensus 229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~--------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDKY--------------QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSSCEE--------------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCCeE--------------EEcCCccceeEEEECCCCCEEEEecCCCcEEEEEC
Confidence 9999999999999999999999999877643 23578889999999999999999999999999999
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
.+++..... .|...|.+++|+|++++|++++.||.|++|++.
T Consensus 295 ~~~~~~~~~----------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 295 PYGASIFQS----------------KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp TTCCEEEEE----------------ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCCeEEEEe----------------cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 888765332 366789999999999999999999999999973
No 59
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=216.35 Aligned_cols=205 Identities=12% Similarity=0.197 Sum_probs=170.2
Q ss_pred CCCceEEEEeCCCeEEEEEecC---CceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCc------cce
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRN---TKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPN------CLR 69 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~---~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~------~~~ 69 (221)
|++++|++|+.||.|++||+.. ..+.+..+..|...|.+++|+|+ ..|++++.|+.|++||+++++ ...
T Consensus 77 ~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 156 (416)
T 2pm9_A 77 HNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPL 156 (416)
T ss_dssp SSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCB
T ss_pred CCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccc
Confidence 6889999999999999999984 13577888899999999999974 569999999999999998876 332
Q ss_pred e---eeccccceeEEEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEe----------------ecc-----------
Q psy10662 70 S---FVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRF----------------DTV----------- 118 (221)
Q Consensus 70 ~---~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----------------~~~----------- 118 (221)
. +..|...|.+++|+|+ +.++++++.|+.|++||+++++.+..+.. .+.
T Consensus 157 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 236 (416)
T 2pm9_A 157 TPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS 236 (416)
T ss_dssp CCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred ccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC
Confidence 2 3568889999999999 78999999999999999988776554432 111
Q ss_pred ------------cc-eeEeeEE-EeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662 119 ------------RS-MLESSFV-GHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE 183 (221)
Q Consensus 119 ------------~~-~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (221)
.. .....+. +|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.
T Consensus 237 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-------------- 302 (416)
T 2pm9_A 237 DNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP-------------- 302 (416)
T ss_dssp SSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE--------------
T ss_pred CCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec--------------
Confidence 10 2223344 6888999999999 99999999999999999999887766554
Q ss_pred cccccceeEEEEcCCC-cEEEEecCCCeEEEEECCccc
Q psy10662 184 DDTNEFVSAVCWRQLS-RVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 184 ~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.|...|.+++|+|++ ++|++++.||.|++|++.+++
T Consensus 303 -~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 303 -ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp -CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred -CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 678889999999999 899999999999999998754
No 60
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1e-33 Score=202.78 Aligned_cols=191 Identities=11% Similarity=0.062 Sum_probs=147.9
Q ss_pred CCceEEEEe--CCCeEEEEEecCCceeeEEEEeccCceEEEEEec----CCcEEEecCCCcEEEEEcCCCccceeeeccc
Q psy10662 2 NSCHLAFGS--ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN----KEDIVSASTDSQLKLWNINKPNCLRSFVGHI 75 (221)
Q Consensus 2 ~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~ 75 (221)
+++++.+++ .|+.|++|++.+.++.+..+..|...+..++|++ +..|++++.|++|++||++++++++.+.+|.
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 455555533 5999999999767888888899999999999986 2458899999999999999999999997654
Q ss_pred ---cceeEEEEeCCCCEE------------EEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662 76 ---NDKNFVGLATDGDYV------------ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT 140 (221)
Q Consensus 76 ---~~v~~~~~~~~~~~l------------~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 140 (221)
..+.+++|+|++.++ ++|+.|++|++||..+++.+..+.+... .+|.....+. +.
T Consensus 224 ~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p--------~Gh~~~~lsg--~~ 293 (356)
T 2w18_A 224 SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLP--------PGQAGRFLEG--DV 293 (356)
T ss_dssp ---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCC--------TTCCCCEEEE--EE
T ss_pred cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeecc--------CCCcceeEcc--cc
Confidence 357778999999876 5678899999999999988765422210 1333333333 33
Q ss_pred CCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccccee-EEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 141 DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVS-AVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 141 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
++.++++++.|++|+|||+.+++.+..+. +|...+. .++|+|||++|++|+.|++|++||+.
T Consensus 294 sg~~lASgS~DgTIkIWDl~tGk~l~tL~---------------gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 294 KDHCAAAILTSGTIAIWDLLLGQCTALLP---------------PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp ETTEEEEEETTSCEEEEETTTCSEEEEEC---------------CC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEec---------------CCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 47899999999999999999999887764 5655544 58999999999999999999999963
No 61
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.2e-34 Score=215.20 Aligned_cols=206 Identities=11% Similarity=0.180 Sum_probs=159.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCce-----------eeEEEEecc------------CceEEEEEecC---CcEEEecCC
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKE-----------ALAVFKGHR------------KAVSYVKFLNK---EDIVSASTD 54 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~-----------~~~~~~~~~------------~~i~~~~~~~~---~~l~s~~~d 54 (221)
|++++||+|+.||.|+|||+. ..+ ....+.+|. +.|.+++|+|+ ..|++++.|
T Consensus 38 ~~g~~la~g~~dg~v~iw~~~-~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d 116 (447)
T 3dw8_B 38 HSGELLATGDKGGRVVIFQQE-QENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND 116 (447)
T ss_dssp SSSSEEEEEETTSEEEEEEEC-C-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred CCCCEEEEEcCCCeEEEEEec-CCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence 689999999999999999998 333 577888998 88999999985 469999999
Q ss_pred CcEEEEEcCCCccc---------------------------------------ee-eeccccceeEEEEeCCCCEEEEec
Q psy10662 55 SQLKLWNINKPNCL---------------------------------------RS-FVGHINDKNFVGLATDGDYVACGS 94 (221)
Q Consensus 55 ~~v~~wd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~~~~~~l~~~~ 94 (221)
+.|++||+.+++.. .. ..+|...|.+++|+|++++|+++
T Consensus 117 ~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~- 195 (447)
T 3dw8_B 117 KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA- 195 (447)
T ss_dssp SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-
T ss_pred CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-
Confidence 99999999764331 12 35789999999999999999998
Q ss_pred CCCeEEEEECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC-CEEEEecCCCeEEEEEcCCCCc----eeee
Q psy10662 95 ENNSLYIYYKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKH----MHAY 168 (221)
Q Consensus 95 ~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~----~~~~ 168 (221)
.|+.|++||+++ .+.+..+.... ..+.+|...|.+++|+|++ ++|++|+.||.|++||+++++. ...+
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 269 (447)
T 3dw8_B 196 DDLRINLWHLEITDRSFNIVDIKP------ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLF 269 (447)
T ss_dssp CSSEEEEEETTEEEEEEEEEECCC------SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEE
T ss_pred CCCeEEEEECCCCCceeeeeeccc------ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEe
Confidence 799999999984 33333221110 1245788899999999998 9999999999999999998775 3333
Q ss_pred eeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 169 RFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
..... ......+..|...|.+++|+|+|++|++++. +.|++||+++
T Consensus 270 ~~~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 270 EEPED---PSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp CCC--------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred ccCCC---ccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 21110 0001112234458999999999999999998 9999999986
No 62
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=211.57 Aligned_cols=202 Identities=13% Similarity=0.254 Sum_probs=168.0
Q ss_pred CCCc-eEEEEeCCCeEEEEEe----cCCce------eeEEEEe----------ccCceEEEEEecC-CcEEEecCCCcEE
Q psy10662 1 MNSC-HLAFGSADHCVHYYDL----RNTKE------ALAVFKG----------HRKAVSYVKFLNK-EDIVSASTDSQLK 58 (221)
Q Consensus 1 ~~~~-~l~~~~~dg~i~i~~~----~~~~~------~~~~~~~----------~~~~i~~~~~~~~-~~l~s~~~d~~v~ 58 (221)
|+++ +||+|+.||.|++|++ . +++ ....+.. |.+.|++++|+|+ ..|++++.||.|+
T Consensus 55 ~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 133 (425)
T 1r5m_A 55 PLDESILAYGEKNSVARLARIVETDQ-EGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELR 133 (425)
T ss_dssp SSCTTEEEEEETBTEEEEEEEEEC-------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCcEEEEecCCceEEEEEEecccC-CccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEE
Confidence 6788 9999999999999999 6 444 4455554 6789999999985 5689999999999
Q ss_pred EEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEee----------------------
Q psy10662 59 LWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD---------------------- 116 (221)
Q Consensus 59 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~---------------------- 116 (221)
+|| .+++.+..+..|...|.+++|+|+++++++++.|+.|++||+.+++.+..+...
T Consensus 134 i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (425)
T 1r5m_A 134 LWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDV 212 (425)
T ss_dssp EEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCC
T ss_pred EEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEE
Confidence 999 677888888889999999999999999999999999999999998877655322
Q ss_pred ---------------------cccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccc
Q psy10662 117 ---------------------TVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS 175 (221)
Q Consensus 117 ---------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 175 (221)
.........+..|...+.+++|+|++++|++++.|+.|++||+++++....+.
T Consensus 213 ~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------ 286 (425)
T 1r5m_A 213 EWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFY------ 286 (425)
T ss_dssp EEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEEC------
T ss_pred EEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEec------
Confidence 22223334566788899999999999999999999999999998876655442
Q ss_pred cccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 176 MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.|...|.+++|+|++ +|++++.|+.|++||+.+++
T Consensus 287 ---------~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 287 ---------GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp ---------CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE
T ss_pred ---------CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc
Confidence 577889999999999 99999999999999998764
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.6e-34 Score=212.75 Aligned_cols=200 Identities=13% Similarity=0.227 Sum_probs=163.6
Q ss_pred ceEEEEeCCCeEEEEEecCCcee-----eEEEEec-----cCceEEEEEe----c-CCc-EEEecCCCcEEEEEcCC---
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEA-----LAVFKGH-----RKAVSYVKFL----N-KED-IVSASTDSQLKLWNINK--- 64 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~-----~~~~~~~-----~~~i~~~~~~----~-~~~-l~s~~~d~~v~~wd~~~--- 64 (221)
++|++++.||.|++|++. .++. ...+..| ...|.+++|+ | +.. |++++.||.|++||+++
T Consensus 82 ~~l~s~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRIT-REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEEEEEETTSCEEEEEEE-ECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred cEEEEEcCCCCEEEEEcc-CCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccc
Confidence 899999999999999998 4554 7778888 5899999999 7 456 88999999999999998
Q ss_pred ---Cccce-----eee-------ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEE-
Q psy10662 65 ---PNCLR-----SFV-------GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG- 128 (221)
Q Consensus 65 ---~~~~~-----~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~- 128 (221)
++.+. .+. .|...|.+++|+|++ ++++++.|+.|++||+++++.+..+ ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-------------~~~ 226 (397)
T 1sq9_A 161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF-------------ESQ 226 (397)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE-------------ECC
T ss_pred ccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE-------------ecc
Confidence 77776 663 378899999999999 9999999999999999988877654 45
Q ss_pred --e---eCceEEEEEecCCCEEEEecCC---CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc
Q psy10662 129 --H---INDKNFVGLATDGDYVACGSEN---NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR 200 (221)
Q Consensus 129 --~---~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 200 (221)
| ...+.+++|+|++++|++++.| +.|++||+++++.+..+....... ........|...|.+++|+|+++
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~ 304 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS--QASLGEFAHSSWVMSLSFNDSGE 304 (397)
T ss_dssp C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC----------CCBSBSSCEEEEEECSSSS
T ss_pred ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccc--cccccccccCCcEEEEEECCCCC
Confidence 7 8899999999999999999999 999999999887766553110000 00000112788999999999999
Q ss_pred EEEEecCCCeEEEEECCccc
Q psy10662 201 VLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 201 ~l~~~~~dg~i~iw~~~~~~ 220 (221)
+|++++.||.|++||+.+++
T Consensus 305 ~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 305 TLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp EEEEEETTSEEEEEETTTTE
T ss_pred EEEEEeCCCeEEEEEcCCCc
Confidence 99999999999999998764
No 64
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=211.79 Aligned_cols=198 Identities=16% Similarity=0.193 Sum_probs=160.8
Q ss_pred CceEEEEeCCCeEEEEEecCCcee-eEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEA-LAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF 80 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~-~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~ 80 (221)
|++|++|+.||.|++||+...+.. ...+.+|...|.+++|+|+ ..|++++.||.|++||+++++.+. +..|...|.+
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~ 132 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKT 132 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEE
Confidence 799999999999999999852444 4788899999999999985 569999999999999999888766 4569999999
Q ss_pred EEE--eCCCCEEEEecCCCeEEEEECCCCeeeEEEEee------------------------------------------
Q psy10662 81 VGL--ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFD------------------------------------------ 116 (221)
Q Consensus 81 ~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------------------------------------------ 116 (221)
++| +|++.++++++.|+.|++||+++++.+..+...
T Consensus 133 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 212 (368)
T 3mmy_A 133 IHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLK 212 (368)
T ss_dssp EEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCS
T ss_pred EEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhcccccc
Confidence 999 899999999999999999999888765544311
Q ss_pred --------------------------------cccc---eeEeeEEEeeC------------ceEEEEEecCCCEEEEec
Q psy10662 117 --------------------------------TVRS---MLESSFVGHIN------------DKNFVGLATDGDYVACGS 149 (221)
Q Consensus 117 --------------------------------~~~~---~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~ 149 (221)
.... .....+..|.. .|.+++|+|++++|++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~ 292 (368)
T 3mmy_A 213 HQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG 292 (368)
T ss_dssp SCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE
T ss_pred CCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc
Confidence 0000 11123334443 699999999999999999
Q ss_pred CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662 150 ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 150 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 216 (221)
.||.|++||+.+++.+..+ ..|...|.+++|+|+|++|++++.|+..+.|++
T Consensus 293 ~dg~i~iwd~~~~~~~~~~---------------~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 293 SDGRFSFWDKDARTKLKTS---------------EQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp TTSCEEEEETTTTEEEEEC---------------CCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred cCCeEEEEECCCCcEEEEe---------------cCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 9999999999887765544 267889999999999999999998875555443
No 65
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=209.86 Aligned_cols=196 Identities=17% Similarity=0.177 Sum_probs=163.3
Q ss_pred CceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecC---CcEEEecCCCcEEEEEcCCCcc--ceeeeccc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNK---EDIVSASTDSQLKLWNINKPNC--LRSFVGHI 75 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~~--~~~~~~~~ 75 (221)
+++|++|+.||.|++||+. .++ .+..+..|...|.+++|+|+ ..+++++.|+.|++||+++... ...+..|.
T Consensus 69 ~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 147 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEE-NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 147 (379)
T ss_dssp CSEEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT
T ss_pred CCEEEEeccCCEEEEEEcC-CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC
Confidence 8999999999999999998 554 66777889999999999974 5699999999999999988743 34556789
Q ss_pred cceeEEEEeC-------------CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-
Q psy10662 76 NDKNFVGLAT-------------DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD- 141 (221)
Q Consensus 76 ~~v~~~~~~~-------------~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 141 (221)
..|.+++|+| ++.++++++.|+.|++||+++++.... ....+.+|...|.+++|+|+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~h~~~v~~~~~sp~~ 218 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV---------LESTLEGHSDWVRDVAWSPTV 218 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEE---------EEEEECCCSSCEEEEEECCCC
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCccee---------eEEEEecccCcEeEEEECCCC
Confidence 9999999999 689999999999999999976543322 23345788999999999999
Q ss_pred --CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 142 --GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 142 --~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
+++|++++.||.|++||++++....... ......|...|.+++|+|++++|++++.||.|++|++..
T Consensus 219 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 219 LLRSYLASVSQDRTCIIWTQDNEQGPWKKT----------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSSEEEEEEETTSCEEEEEESSTTSCCEEE----------ESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCeEEEEeCCCEEEEEeCCCCCccceee----------eeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 8999999999999999998765322111 112235778899999999999999999999999999873
No 66
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-34 Score=215.48 Aligned_cols=217 Identities=10% Similarity=0.142 Sum_probs=174.8
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCc---------------eEEEEEecCCcEEEecCCCcEEEEEcCCC
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKA---------------VSYVKFLNKEDIVSASTDSQLKLWNINKP 65 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~---------------i~~~~~~~~~~l~s~~~d~~v~~wd~~~~ 65 (221)
|++++|++++.||.|++||+. +++.+..+..+... +.+++|+|++.+++++.|+.|++||++++
T Consensus 159 ~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~ 237 (425)
T 1r5m_A 159 KDGTHIISMDVENVTILWNVI-SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK 237 (425)
T ss_dssp TTSSEEEEEETTCCEEEEETT-TTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS
T ss_pred CCCCEEEEEecCCeEEEEECC-CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC
Confidence 688999999999999999998 67788888877776 99999999999999999999999999999
Q ss_pred ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE----------------------------eec
Q psy10662 66 NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR----------------------------FDT 117 (221)
Q Consensus 66 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----------------------------~~~ 117 (221)
+.+..+..|...|.+++|+|+++++++++.|+.|++||+++++.+..+. |+.
T Consensus 238 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 238 TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSL 317 (425)
T ss_dssp SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEET
T ss_pred ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEEC
Confidence 9998888999999999999999999999999999999998776555443 444
Q ss_pred ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc-----ccccccccccccccc--ce
Q psy10662 118 VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV-----RSMLERDRNEDDTNE--FV 190 (221)
Q Consensus 118 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~v 190 (221)
........+..|...+.+++|+|++++|++++.||.|++||+.+............ .........+..|.. .|
T Consensus 318 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 397 (425)
T 1r5m_A 318 KQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYI 397 (425)
T ss_dssp TTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCE
T ss_pred CCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCce
Confidence 55556666777888999999999999999999999999999976651110000000 000112233446655 89
Q ss_pred eEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 191 SAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 191 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
.+++|+|++++|++++.||.|++|+++.
T Consensus 398 ~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 398 FDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp EEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred EEEEccCCCceEEEEecCceEEEEeecC
Confidence 9999999999999999999999999863
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3e-34 Score=215.74 Aligned_cols=190 Identities=17% Similarity=0.246 Sum_probs=159.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecc---c-
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGH---I- 75 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~---~- 75 (221)
|++++|++|+.||.|++||+. +++.+..+.+|...|.+++|+|+ ..|++++.|+.|++||+++++.+..+..+ .
T Consensus 149 ~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 227 (420)
T 3vl1_A 149 PSGEALISSSQDMQLKIWSVK-DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHD 227 (420)
T ss_dssp TTSSEEEEEETTSEEEEEETT-TCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTC
T ss_pred CCCCEEEEEeCCCeEEEEeCC-CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCC
Confidence 688999999999999999998 67788889999999999999985 56999999999999999999888877642 2
Q ss_pred --------------------cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEE
Q psy10662 76 --------------------NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF 135 (221)
Q Consensus 76 --------------------~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 135 (221)
..+.+++|+|+++++++++.||.|++||+++++.+..+ ...|...+.+
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~------------~~~~~~~v~~ 295 (420)
T 3vl1_A 228 GVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQL------------PSKFTCSCNS 295 (420)
T ss_dssp CEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEE------------CCTTSSCEEE
T ss_pred CccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEc------------ccccCCCcee
Confidence 34455556789999999999999999999988776553 2356788999
Q ss_pred EEEecCCC-EEEEecCCCeEEEEEcCCCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEE
Q psy10662 136 VGLATDGD-YVACGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKI 213 (221)
Q Consensus 136 ~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 213 (221)
++|+|+++ +|++|+.||.|++||+++++. +..+. ..|...|..+.+ +++++|++++.||.|++
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~--------------~~~~~~v~~~~~-~~~~~l~s~~~d~~v~i 360 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFL--------------INEGTPINNVYF-AAGALFVSSGFDTSIKL 360 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE--------------ESTTSCEEEEEE-ETTEEEEEETTTEEEEE
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh--------------ccCCCCceEEEe-CCCCEEEEecCCccEEE
Confidence 99999999 999999999999999988653 33332 125667887755 57899999999999999
Q ss_pred EECCc
Q psy10662 214 YVIPI 218 (221)
Q Consensus 214 w~~~~ 218 (221)
|++..
T Consensus 361 w~~~~ 365 (420)
T 3vl1_A 361 DIISD 365 (420)
T ss_dssp EEECC
T ss_pred EeccC
Confidence 99875
No 68
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.2e-33 Score=226.61 Aligned_cols=204 Identities=14% Similarity=0.193 Sum_probs=173.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++.+|++|+.||.|+|||+. +++.+..+..|..+|.+++|+|+ ..|++++.||.|++||+.+++.+..+.+|...|.
T Consensus 23 p~~~~la~~~~~g~v~iwd~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~ 101 (814)
T 3mkq_A 23 PTEPWVLTTLYSGRVEIWNYE-TQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR 101 (814)
T ss_dssp SSSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCCEEEEEECC-CCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEE
Confidence 789999999999999999998 78888999999999999999984 5699999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCC-eeeEEEE----------eec--------------------ccceeEeeEEE
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLS-KHMHAYR----------FDT--------------------VRSMLESSFVG 128 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~~----------~~~--------------------~~~~~~~~~~~ 128 (221)
+++|+|+++++++++.||.|++||+.++ .....+. |.+ ........+..
T Consensus 102 ~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 181 (814)
T 3mkq_A 102 SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (814)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec
Confidence 9999999999999999999999999876 3333322 222 11111222233
Q ss_pred e-eCceEEEEEec--CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662 129 H-INDKNFVGLAT--DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA 205 (221)
Q Consensus 129 ~-~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 205 (221)
+ ...+.+++|+| ++.++++++.||.|++||+.+++....+. +|...|.+++|+|++++|+++
T Consensus 182 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~ 246 (814)
T 3mkq_A 182 GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE---------------GHMSNVSFAVFHPTLPIIISG 246 (814)
T ss_dssp CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE---------------CCSSCEEEEEECSSSSEEEEE
T ss_pred CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc---------------CCCCCEEEEEEcCCCCEEEEE
Confidence 3 37789999999 99999999999999999998877655553 577889999999999999999
Q ss_pred cCCCeEEEEECCccc
Q psy10662 206 NSQGIIKIYVIPIRV 220 (221)
Q Consensus 206 ~~dg~i~iw~~~~~~ 220 (221)
+.||.|++||+.+++
T Consensus 247 ~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 247 SEDGTLKIWNSSTYK 261 (814)
T ss_dssp ETTSCEEEEETTTCS
T ss_pred eCCCeEEEEECCCCc
Confidence 999999999998754
No 69
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-34 Score=234.76 Aligned_cols=213 Identities=11% Similarity=0.118 Sum_probs=168.0
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF 80 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~ 80 (221)
|++++||+|+.||.|+||+.. ..+....+ .|..+|.+++|+|+.+|++++.|++|++||+++++.+..+. |...|++
T Consensus 27 pdg~~lAsgs~Dg~I~lw~~~-~~~~~~~~-~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~ 103 (902)
T 2oaj_A 27 FTQNLLAIATVTGEVHIYGQQ-QVEVVIKL-EDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITS 103 (902)
T ss_dssp TTTTEEEEEETTSEEEEECST-TCEEEEEC-SSCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCC-CcEEEEEc-CCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEE
Confidence 789999999999999999987 55554444 47889999999996669999999999999999999888875 7788999
Q ss_pred EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeE-eeEEEeeCceEEEEEecC-CCEEEEecCCCeEEEEE
Q psy10662 81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE-SSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYY 158 (221)
Q Consensus 81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d 158 (221)
++|+|+++++++|+.||.|++||+++++.. .+.... .... ..+.+|...|.+++|+|+ +..+++|+.||.| +||
T Consensus 104 v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~--~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd 179 (902)
T 2oaj_A 104 IDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDN--LQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYS 179 (902)
T ss_dssp EECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECC--HHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEE
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCccc-cceecc--ccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEE
Confidence 999999999999999999999999988753 221100 0000 123568889999999996 5789999999999 999
Q ss_pred cCCCCceeeeeeeccccccc---ccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 159 KGLSKHMHAYRFDTVRSMLE---RDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+++++....+.......... .......|...|.+++|+|+|++|++++.||.|++||+.+++
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 180 LVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp TTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred CCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 99988776654321000000 001223566789999999999999999999999999998764
No 70
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=217.23 Aligned_cols=206 Identities=13% Similarity=0.169 Sum_probs=167.1
Q ss_pred CC-CceEEEEeCCCeEEEEEecCCceeeEEEEec------cCceEEEEEecCC--cEEEecCCC---cEEEEEcCCC-cc
Q psy10662 1 MN-SCHLAFGSADHCVHYYDLRNTKEALAVFKGH------RKAVSYVKFLNKE--DIVSASTDS---QLKLWNINKP-NC 67 (221)
Q Consensus 1 ~~-~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~--~l~s~~~d~---~v~~wd~~~~-~~ 67 (221)
|+ +.+|++++.||.|++||+. .++.+..+..| ...|.+++|+|++ .+++++.|+ .|++||++++ +.
T Consensus 175 ~~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~ 253 (416)
T 2pm9_A 175 QSLAHVFASAGSSNFASIWDLK-AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP 253 (416)
T ss_dssp SSCTTEEEEESSSSCEEEEETT-TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC
T ss_pred CCCCcEEEEEcCCCCEEEEECC-CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC
Confidence 45 6899999999999999998 67777888766 7899999999854 588999998 9999999986 56
Q ss_pred ceeee-ccccceeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC-CE
Q psy10662 68 LRSFV-GHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG-DY 144 (221)
Q Consensus 68 ~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~ 144 (221)
+..+. +|...|.+++|+| ++.++++++.|+.|++||+++++.+..+ ..|...+.+++|+|++ .+
T Consensus 254 ~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~-------------~~~~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 254 LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF-------------PARGNWCFKTKFAPEAPDL 320 (416)
T ss_dssp SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE-------------ECSSSCCCCEEECTTCTTE
T ss_pred cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee-------------cCCCCceEEEEECCCCCCE
Confidence 67777 8999999999999 8999999999999999999988776654 6788899999999998 89
Q ss_pred EEEecCCCeEEEEEcCCCCceeeeee-------------eccc-------ccccccccccccccceeEEEEcCCCcEEEE
Q psy10662 145 VACGSENNSLYIYYKGLSKHMHAYRF-------------DTVR-------SMLERDRNEDDTNEFVSAVCWRQLSRVLVA 204 (221)
Q Consensus 145 l~~~~~d~~i~~~d~~~~~~~~~~~~-------------~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 204 (221)
|++++.|+.|++||+..........- .... ...........|..++.+++|+|+|++|++
T Consensus 321 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~ 400 (416)
T 2pm9_A 321 FACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQI 400 (416)
T ss_dssp EEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECB
T ss_pred EEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEE
Confidence 99999999999999987664332210 0000 000001122236777889999999999999
Q ss_pred ecCCCeEEEEECCccc
Q psy10662 205 ANSQGIIKIYVIPIRV 220 (221)
Q Consensus 205 ~~~dg~i~iw~~~~~~ 220 (221)
++.|+.|++|++.+.+
T Consensus 401 ~~~d~~v~~w~~~~~~ 416 (416)
T 2pm9_A 401 TPDGKGVSITNPKISG 416 (416)
T ss_dssp CTTSSCBCCBCCCCC-
T ss_pred eCCCCeEEEEEeccCC
Confidence 9999999999998753
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.3e-34 Score=213.56 Aligned_cols=190 Identities=12% Similarity=0.150 Sum_probs=160.3
Q ss_pred EEEEeCCCeEEEEEecCCce---eeEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCC-------ccceeeec
Q psy10662 6 LAFGSADHCVHYYDLRNTKE---ALAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKP-------NCLRSFVG 73 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~~~~---~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~-------~~~~~~~~ 73 (221)
+++++.||.|+||++...++ .+..+.+|.+.|.+++|+| + ..|++++.||.|++||+.++ +.+..+.+
T Consensus 50 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~ 129 (402)
T 2aq5_A 50 ICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG 129 (402)
T ss_dssp EBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC
T ss_pred EEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC
Confidence 44578899999999974443 3446778999999999998 4 56899999999999999887 56778889
Q ss_pred cccceeEEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662 74 HINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN 152 (221)
Q Consensus 74 ~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 152 (221)
|...|.+++|+|++ .++++++.|+.|++||+++++.+..+. ...|...|.+++|+|++++|++++.|+
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG-----------PDVHPDTIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC-----------TTTCCSCEEEEEECTTSSCEEEEETTS
T ss_pred CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe-----------cCCCCCceEEEEECCCCCEEEEEecCC
Confidence 99999999999998 699999999999999999887765430 046788999999999999999999999
Q ss_pred eEEEEEcCCCCceeeeeeecccccccccccccccccc-eeEEEEcCCCcEEEEe---cCCCeEEEEECCccc
Q psy10662 153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF-VSAVCWRQLSRVLVAA---NSQGIIKIYVIPIRV 220 (221)
Q Consensus 153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~---~~dg~i~iw~~~~~~ 220 (221)
.|++||+++++.+..+. ..|... +..++|+|++++|+++ +.|+.|++||+.+++
T Consensus 199 ~i~iwd~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKD--------------RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEEEETTTTEEEEEEE--------------CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred cEEEEeCCCCceeeeec--------------cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 99999999877665542 134443 8899999999999999 799999999998753
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-34 Score=214.43 Aligned_cols=203 Identities=12% Similarity=0.119 Sum_probs=153.7
Q ss_pred CCCceEEEEeCCCeEEEEEecCCce---eeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCc---cceeeec
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKE---ALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPN---CLRSFVG 73 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~---~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~---~~~~~~~ 73 (221)
|++++|++|+.||.|++||+. .++ ....+..|...|.+++|+|+ ..|++++.|+.|++||+++++ ....+..
T Consensus 65 ~~~~~l~s~s~d~~v~vwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 143 (377)
T 3dwl_C 65 PKSNRIVTCSQDRNAYVYEKR-PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR 143 (377)
T ss_dssp TTTCCEEEEETTSSEEEC-------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS
T ss_pred CCCCEEEEEeCCCeEEEEEcC-CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec
Confidence 688999999999999999998 444 56667789999999999974 569999999999999999876 3666766
Q ss_pred -cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---ee--cccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662 74 -HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---FD--TVRSMLESSFVGHINDKNFVGLATDGDYVAC 147 (221)
Q Consensus 74 -~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 147 (221)
|...|.+++|+|+++++++++.|+.|++||+...+...... +. .........+ +|...|.+++|+|++++|++
T Consensus 144 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~ 222 (377)
T 3dwl_C 144 PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAY 222 (377)
T ss_dssp SCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEE
T ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEE
Confidence 99999999999999999999999999999986443211100 00 0112334445 88899999999999999999
Q ss_pred ecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
++.|+.|++||+.+++.... ....+..|...|.+++|+|++++|++++.++.+ +|+..
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~-----------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 223 AGHDSSVTIAYPSAPEQPPR-----------ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EETTTEEC-CEECSTTSCEE-----------ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred EeCCCcEEEEECCCCCCcce-----------eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 99999999999988765111 012234688899999999999999999877766 66664
No 73
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-34 Score=215.32 Aligned_cols=207 Identities=12% Similarity=0.124 Sum_probs=161.9
Q ss_pred CCCceEEEEeCCCeEEEEEec--CCceeeEEEEe------------ccCceEEEEEe--c-CCcEEEecCCCcEEEEEcC
Q psy10662 1 MNSCHLAFGSADHCVHYYDLR--NTKEALAVFKG------------HRKAVSYVKFL--N-KEDIVSASTDSQLKLWNIN 63 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~------------~~~~i~~~~~~--~-~~~l~s~~~d~~v~~wd~~ 63 (221)
|++++|++|+.||.|++||+. ..++....+.. +...+.++.+. + +..+++++.|+.|++||++
T Consensus 121 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 200 (437)
T 3gre_A 121 PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR 200 (437)
T ss_dssp TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 578999999999999999995 12333333332 34456666643 3 5569999999999999999
Q ss_pred CCccceeeec--cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe--
Q psy10662 64 KPNCLRSFVG--HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA-- 139 (221)
Q Consensus 64 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 139 (221)
+++.+..+.. |...|.+++|+|+++++++++.||.|++||+++++.+..+. ..|...|.+++|+
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS------------FGDHAPITHVEVCQF 268 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB------------CTTCEEEEEEEECTT
T ss_pred CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe------------cCCCCceEEEEeccc
Confidence 9999998887 88999999999999999999999999999999988876641 1455678999655
Q ss_pred --cCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccc---------ccccccc--cccceeEEEEcCCCcEEEEec
Q psy10662 140 --TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE---------RDRNEDD--TNEFVSAVCWRQLSRVLVAAN 206 (221)
Q Consensus 140 --~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~---------~~~~~~~--~~~~v~~~~~~~~~~~l~~~~ 206 (221)
|++++|++++.||.|++||+++++.+..+.-........ ....+.+ |...|.+++|+ ++++|++++
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~ 347 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDE 347 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEG
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecC
Confidence 568899999999999999999988777665221111000 0011233 88899999999 789999999
Q ss_pred CCCeEEEEECCccc
Q psy10662 207 SQGIIKIYVIPIRV 220 (221)
Q Consensus 207 ~dg~i~iw~~~~~~ 220 (221)
.||.|++||+.+++
T Consensus 348 ~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 348 ATSSIVMFSLNELS 361 (437)
T ss_dssp GGTEEEEEETTCGG
T ss_pred CCCeEEEEECCCcc
Confidence 99999999998765
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7e-33 Score=206.14 Aligned_cols=203 Identities=12% Similarity=0.043 Sum_probs=158.4
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEecc---CceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHR---KAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~---~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
++++|++++.|+.|++||+. . ..+..+..+. ..|.+++|+|+ ..|++++.|+.|++||+ +++.+..+..|...
T Consensus 130 ~~~~l~s~~~d~~i~iwd~~-~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~ 206 (383)
T 3ei3_B 130 NTNQLFVSSIRGATTLRDFS-G-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAK 206 (383)
T ss_dssp EEEEEEEEETTTEEEEEETT-S-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSC
T ss_pred CCCEEEEEeCCCEEEEEECC-C-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCc
Confidence 57899999999999999998 3 4455555444 78999999974 56999999999999999 57778888899999
Q ss_pred eeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEE
Q psy10662 78 KNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLY 155 (221)
Q Consensus 78 v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~ 155 (221)
|.+++|+|+++ ++++++.|+.|++||+++.+.. ...... .+|...+.+++|+| ++++|++++.|+.|+
T Consensus 207 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---------~~~~~~-~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 207 VTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK---------NSYIAE-MPHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST---------TCEEEE-EECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred EEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc---------cceEEE-ecCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 99999999999 8999999999999999873211 111122 36889999999999 999999999999999
Q ss_pred EEEcCCCCceeeeeeecc----------------------------------cc--------cccccccccc--ccccee
Q psy10662 156 IYYKGLSKHMHAYRFDTV----------------------------------RS--------MLERDRNEDD--TNEFVS 191 (221)
Q Consensus 156 ~~d~~~~~~~~~~~~~~~----------------------------------~~--------~~~~~~~~~~--~~~~v~ 191 (221)
+||+++.+....+..... .. .......+.+ |...+.
T Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~ 356 (383)
T 3ei3_B 277 VYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIIS 356 (383)
T ss_dssp EEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCC
T ss_pred EEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEE
Confidence 999988766444331100 00 0011122222 456677
Q ss_pred EEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 192 AVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 192 ~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
.++|+|++++|++++ ||.|++|++++
T Consensus 357 ~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 357 LNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEEEecCccEEEEec-CCcEEEEecCC
Confidence 789999999999997 99999999975
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.8e-34 Score=209.68 Aligned_cols=211 Identities=10% Similarity=0.100 Sum_probs=164.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEEEE----Eec-CCcEEEecCCCcEEEEEcCCCccceee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSYVK----FLN-KEDIVSASTDSQLKLWNINKPNCLRSF 71 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~~~----~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~~ 71 (221)
|++++|++|+.||.|++||+.....++..+..|.+ .+.+++ |+| +..+++++.|+.|++||+++++....
T Consensus 127 ~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~- 205 (357)
T 3i2n_A 127 EGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE- 205 (357)
T ss_dssp -CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-
T ss_pred CCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-
Confidence 57889999999999999999844447777776655 899999 455 45688999999999999999887544
Q ss_pred eccccceeEEEEeC---CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EEEE
Q psy10662 72 VGHINDKNFVGLAT---DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YVAC 147 (221)
Q Consensus 72 ~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~ 147 (221)
..|...|.+++|+| ++.++++++.||.|++||+++++....+. ...+.+|...|.+++|+|+++ ++++
T Consensus 206 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~l~~ 277 (357)
T 3i2n_A 206 TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFA--------SVSEKAHKSTVWQVRHLPQNRELFLT 277 (357)
T ss_dssp EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEE--------EEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccccee--------eeccCCCcCCEEEEEECCCCCcEEEE
Confidence 56888999999999 89999999999999999998766544331 123457899999999999998 8999
Q ss_pred ecCCCeEEEEEcCCCCceeeeeeec----ccccccccccccccccceeEEEEcCCCcEEE-EecCCCeEEEEECCccc
Q psy10662 148 GSENNSLYIYYKGLSKHMHAYRFDT----VRSMLERDRNEDDTNEFVSAVCWRQLSRVLV-AANSQGIIKIYVIPIRV 220 (221)
Q Consensus 148 ~~~d~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~ 220 (221)
++.||.|++||++............ .......+..+..|...|.+++|+|++++|+ +++.||.|++|++.+.+
T Consensus 278 ~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 278 AGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred EeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 9999999999998765432211100 0001123334557889999999999999998 79999999999998754
No 76
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.4e-33 Score=203.55 Aligned_cols=212 Identities=13% Similarity=0.117 Sum_probs=164.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEecC-C-cEEEecCCCcEEEEEc-CCCccceeeec--
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFLNK-E-DIVSASTDSQLKLWNI-NKPNCLRSFVG-- 73 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~~-~-~l~s~~~d~~v~~wd~-~~~~~~~~~~~-- 73 (221)
|++++|++|+.||.|++|++.... .....+..|...|.+++|+|+ . .|++++.||.|++||+ .+++. ..+..
T Consensus 21 ~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~ 99 (342)
T 1yfq_A 21 PSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNE 99 (342)
T ss_dssp GGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCC
T ss_pred CCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccC
Confidence 578999999999999999998433 234556689999999999974 5 5999999999999999 77655 56777
Q ss_pred cccceeEEEEeCCCCEEEEecCCCeEEEEECCC---------CeeeE---------EEE-----------------eecc
Q psy10662 74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGL---------SKHMH---------AYR-----------------FDTV 118 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~---------~~~~~---------~~~-----------------~~~~ 118 (221)
|...|.+++|+| ++++++++.|+.|++||+++ ++++. .+. |+..
T Consensus 100 ~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~ 178 (342)
T 1yfq_A 100 ANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLP 178 (342)
T ss_dssp CCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESS
T ss_pred CCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECC
Confidence 999999999999 99999999999999999876 44221 111 2333
Q ss_pred c---ceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCC------Cceeeeeeeccccccccccccccccc
Q psy10662 119 R---SMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLS------KHMHAYRFDTVRSMLERDRNEDDTNE 188 (221)
Q Consensus 119 ~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (221)
. .........+...+.+++|+| +++++++++.||.|++|+++.. +....+...... .....|..
T Consensus 179 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 252 (342)
T 1yfq_A 179 LCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN------LKDTNLAY 252 (342)
T ss_dssp CCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCC------TTCCSSCC
T ss_pred ccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccc------ccccccce
Confidence 2 112223345677899999999 9999999999999999999876 444444311100 00113456
Q ss_pred ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 189 FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 189 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.|.+++|+|++++|++++.||.|++||+.+++
T Consensus 253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred eEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 89999999999999999999999999998765
No 77
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.6e-33 Score=207.01 Aligned_cols=204 Identities=15% Similarity=0.192 Sum_probs=165.9
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEE-------------eccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCCc
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFK-------------GHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKPN 66 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-------------~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~~ 66 (221)
++++|++|+.||.|++||+. .......+. +|...|.+++|+| + ..|++++.|+.|++||+++++
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 133 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLE-NSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ 133 (408)
T ss_dssp TCCEEEEEETTSCEEEEECC-CCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE
T ss_pred CCCEEEEEcCCCeEEEEECC-CCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc
Confidence 88999999999999999998 443333332 4899999999997 4 469999999999999999998
Q ss_pred cceeeeccccceeEEEEeCCC---CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662 67 CLRSFVGHINDKNFVGLATDG---DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD 143 (221)
Q Consensus 67 ~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 143 (221)
....+. +...+.++.++|.+ .++++++.++.|++||+++++.+.. +..|...|.+++|+|+++
T Consensus 134 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~-------------~~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 134 TADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI-------------LQGHRQEILAVSWSPRYD 199 (408)
T ss_dssp EEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE-------------ECCCCSCEEEEEECSSCT
T ss_pred cceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee-------------ecCCCCcEEEEEECCCCC
Confidence 887775 77789999999854 4999999999999999998876654 367889999999999998
Q ss_pred -EEEEecCCCeEEEEEcCCCC-ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 144 -YVACGSENNSLYIYYKGLSK-HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 144 -~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
++++++.||.|++||++... ....+.................|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 200 ~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 200 YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 58999999999999998775 333332111122222333345788999999999999999999999999999998754
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.7e-33 Score=205.51 Aligned_cols=201 Identities=10% Similarity=0.034 Sum_probs=161.3
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEE--EEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCcc---cee-eec
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAV--FKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNC---LRS-FVG 73 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~--~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~---~~~-~~~ 73 (221)
|++++|++++.||.|++||+. .++.... +..|...|.+++|+|+ ..|++++.|+.|++||++.++. ... ...
T Consensus 62 ~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~ 140 (372)
T 1k8k_C 62 PDSNRIVTCGTDRNAYVWTLK-GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKP 140 (372)
T ss_dssp TTTTEEEEEETTSCEEEEEEE-TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTT
T ss_pred CCCCEEEEEcCCCeEEEEECC-CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecc
Confidence 688999999999999999998 5543333 3568899999999974 5689999999999999988763 222 356
Q ss_pred cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEE-----EEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe
Q psy10662 74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHA-----YRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG 148 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 148 (221)
|...|.+++|+|+++++++++.|+.|++||++....... +............+..|...+.+++|+|++++|+++
T Consensus 141 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 220 (372)
T 1k8k_C 141 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 220 (372)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEE
T ss_pred cCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEE
Confidence 788999999999999999999999999999652211000 000011223344556888999999999999999999
Q ss_pred cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
+.|+.|++||+++++.+..+. .|...|.+++|+|++++|+++ .|+.|++|++.+
T Consensus 221 ~~d~~i~i~d~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 221 SHDSTVCLADADKKMAVATLA---------------SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp ETTTEEEEEEGGGTTEEEEEE---------------CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred eCCCEEEEEECCCCceeEEEc---------------cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999999999887766554 567789999999999999888 899999999976
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-32 Score=196.98 Aligned_cols=198 Identities=13% Similarity=0.152 Sum_probs=158.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC---ccceeeecccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP---NCLRSFVGHIN 76 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~---~~~~~~~~~~~ 76 (221)
|++++|++|+.||.|++||+. +.+....+..|...|.+++|+|+ ..+++++.|+.+++|++... +.+..+..|..
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~ 105 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKD-DQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQG 105 (313)
T ss_dssp EETTEEEEEETTSEEEEEEES-SSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSS
T ss_pred cCCCEEEEEEcCCcEEEEECC-CCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhccc
Confidence 478899999999999999997 77788888999999999999984 56899999999999998764 55667788999
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE----------eec-c-----------------cceeEeeEEE
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR----------FDT-V-----------------RSMLESSFVG 128 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----------~~~-~-----------------~~~~~~~~~~ 128 (221)
.|.++.| +++++++++.|+.|++|| .++....+. +.+ . .......+..
T Consensus 106 ~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 181 (313)
T 3odt_A 106 NVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSG 181 (313)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECS
T ss_pred CEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEec
Confidence 9999999 467899999999999999 444433332 111 0 1112223333
Q ss_pred -eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662 129 -HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS 207 (221)
Q Consensus 129 -~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 207 (221)
+...+.+++|+|++. +++++.||.|++||+++++.+..+. .|...|.+++|+|++ .|++++.
T Consensus 182 ~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~---------------~~~~~i~~~~~~~~~-~l~~~~~ 244 (313)
T 3odt_A 182 IHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE---------------GHESFVYCIKLLPNG-DIVSCGE 244 (313)
T ss_dssp SCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE---------------CCSSCEEEEEECTTS-CEEEEET
T ss_pred cCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh---------------cCCceEEEEEEecCC-CEEEEec
Confidence 677888899998887 8888889999999988777665553 678899999999999 5889999
Q ss_pred CCeEEEEECCccc
Q psy10662 208 QGIIKIYVIPIRV 220 (221)
Q Consensus 208 dg~i~iw~~~~~~ 220 (221)
||.|++||+.+++
T Consensus 245 dg~v~iwd~~~~~ 257 (313)
T 3odt_A 245 DRTVRIWSKENGS 257 (313)
T ss_dssp TSEEEEECTTTCC
T ss_pred CCEEEEEECCCCc
Confidence 9999999998765
No 80
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-33 Score=224.92 Aligned_cols=197 Identities=15% Similarity=0.205 Sum_probs=168.2
Q ss_pred CCCceEEEEeCCCeEEEEEecC-CceeeEEEEeccCceEEEEEec---CCcEEEecCCCcEEEEEcCCCc--cceeeecc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRN-TKEALAVFKGHRKAVSYVKFLN---KEDIVSASTDSQLKLWNINKPN--CLRSFVGH 74 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~-~~~~~~~~~~~~~~i~~~~~~~---~~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~ 74 (221)
|++++|++|+.||.|++||+.. +.+....+.+|.++|++++|+| +..|++++.||.|++||+.+++ .+..+..|
T Consensus 19 ~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h 98 (753)
T 3jro_A 19 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH 98 (753)
T ss_dssp SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCC
Confidence 6899999999999999999973 3466778889999999999985 4669999999999999999886 66677889
Q ss_pred ccceeEEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec------------
Q psy10662 75 INDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT------------ 140 (221)
Q Consensus 75 ~~~v~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------ 140 (221)
...|.+++|+|+ ++++++++.||.|++||++.+..... ..+.+|...|.+++|+|
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~-----------~~~~~~~~~v~~l~~~p~~~~~~~~~~~~ 167 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-----------IIIDAHAIGVNSASWAPATIEEDGEHNGT 167 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC-----------EEEECCSSCEEEEEECCCC---------C
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce-----------eEeecCCCceEEEEecCcccccccccccC
Confidence 999999999999 99999999999999999987643222 23467889999999999
Q ss_pred -CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC---CcEEEEecCCCeEEEEEC
Q psy10662 141 -DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL---SRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 141 -~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iw~~ 216 (221)
+++++++|+.||.|++||++++...... ...+.+|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 168 ~d~~~l~sgs~dg~I~iwd~~~~~~~~~~-----------~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 168 KESRKFVTGGADNLVKIWKYNSDAQTYVL-----------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp GGGCCEEEEETTSCEEEEEEETTTTEEEE-----------EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred CCCCEEEEEECCCeEEEEeccCCccccee-----------eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 5899999999999999999876543222 1123478889999999999 999999999999999999
Q ss_pred Ccc
Q psy10662 217 PIR 219 (221)
Q Consensus 217 ~~~ 219 (221)
.++
T Consensus 237 ~~~ 239 (753)
T 3jro_A 237 DNE 239 (753)
T ss_dssp SSS
T ss_pred CCC
Confidence 875
No 81
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=6.5e-34 Score=212.49 Aligned_cols=199 Identities=13% Similarity=0.097 Sum_probs=141.3
Q ss_pred CCceEEEEeCCCeEEEEEecCCcee-----eEEEEeccCceEEEEEec---------CCcEEEecCCCcEEEEEcCCCcc
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEA-----LAVFKGHRKAVSYVKFLN---------KEDIVSASTDSQLKLWNINKPNC 67 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~-----~~~~~~~~~~i~~~~~~~---------~~~l~s~~~d~~v~~wd~~~~~~ 67 (221)
++.+|++|+.|++|+|||.. .+.. +..+.+|.+.|.+++|+| +..|++++.|++|++||++++.+
T Consensus 100 ~~~~las~~~d~~v~lw~~~-~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITK-NETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEE-TTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCEEEEEeCCCcEEEEECC-CCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 45689999999999999998 4432 233568999999999986 34699999999999999998888
Q ss_pred ceeeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEE--------------------------------
Q psy10662 68 LRSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYR-------------------------------- 114 (221)
Q Consensus 68 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~-------------------------------- 114 (221)
+..+..|..++.+++|+|++. +|++++.|+.|++||+++++......
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 888888999999999999875 79999999999999998775543221
Q ss_pred ---e--------------------ecccceeEeeEEEeeCceEEE------------------EEec--CCCEEEEecCC
Q psy10662 115 ---F--------------------DTVRSMLESSFVGHINDKNFV------------------GLAT--DGDYVACGSEN 151 (221)
Q Consensus 115 ---~--------------------~~~~~~~~~~~~~~~~~v~~~------------------~~~~--~~~~l~~~~~d 151 (221)
| +.........+..+...+..+ .++| ++.++++|+.|
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~D 338 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQH 338 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTT
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCC
Confidence 1 111111111112222222222 2222 34467788899
Q ss_pred CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
|.|++||+.+++...... .|..+|.+++|+|||++||+++.+| +.+|.+.
T Consensus 339 g~V~lwd~~~~~~~~~~~---------------~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 339 GLIQLINTYEKDSNSIPI---------------QLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TEEEEEETTCTTCCEEEE---------------ECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CEEEEEECCCCcEEEEec---------------CCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 999999998877654432 5677899999999999999998776 5666553
No 82
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-32 Score=197.45 Aligned_cols=183 Identities=16% Similarity=0.250 Sum_probs=159.0
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeec-cccce
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVG-HINDK 78 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~-~~~~v 78 (221)
++++|++++.||.|++|| ..+....+..|...+.+++|.| ++.+++++.|+.|++|| ..+....+.. |...+
T Consensus 113 ~~~~l~~~~~d~~i~~~d---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i 187 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWK---EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVV 187 (313)
T ss_dssp ETTEEEEEETTSEEEEEE---TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCE
T ss_pred cCCEEEEEeCCCCEEEEc---CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccE
Confidence 467899999999999999 4667788889999999999986 56799999999999999 4455555655 88899
Q ss_pred eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662 79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY 158 (221)
Q Consensus 79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 158 (221)
.+++|+|++. +++++.|+.|++||+++++.+..+ ..|...+.+++|+|++ .+++++.||.|++||
T Consensus 188 ~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~-------------~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd 252 (313)
T 3odt_A 188 RHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTY-------------EGHESFVYCIKLLPNG-DIVSCGEDRTVRIWS 252 (313)
T ss_dssp EEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEE-------------ECCSSCEEEEEECTTS-CEEEEETTSEEEEEC
T ss_pred EEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhh-------------hcCCceEEEEEEecCC-CEEEEecCCEEEEEE
Confidence 9999999988 999999999999999988776654 6788999999999999 588999999999999
Q ss_pred cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+++++....+. .|...|.+++|+|+++ +++++.||.|++|++++++
T Consensus 253 ~~~~~~~~~~~---------------~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 253 KENGSLKQVIT---------------LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp TTTCCEEEEEE---------------CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGG
T ss_pred CCCCceeEEEe---------------ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCc
Confidence 99887766654 5677899999999998 5668899999999999875
No 83
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=205.78 Aligned_cols=217 Identities=12% Similarity=0.107 Sum_probs=170.2
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC----CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK----EDIVSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
++++|++++.||.|++||+. .++....+. +...+.++.|++. ..+++++.|+.|++||+++++.+..+..|...
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 188 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTN-TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQE 188 (408)
T ss_dssp CTTCEEEEETTSEEEEEETT-TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSC
T ss_pred CCcEEEEEeCCCeEEEeeCC-CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCc
Confidence 66799999999999999998 677777776 7889999999862 26899999999999999999999999999999
Q ss_pred eeEEEEeCCCC-EEEEecCCCeEEEEECCCCe-eeEEEEeec--ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662 78 KNFVGLATDGD-YVACGSENNSLYIYYKGLSK-HMHAYRFDT--VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS 153 (221)
Q Consensus 78 v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 153 (221)
|.+++|+|+++ ++++++.||.|++||+++++ .+..+.... ...........|...|.+++|+|++++|++++.||.
T Consensus 189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 99999999998 58999999999999998765 332221000 011111223578889999999999999999999999
Q ss_pred EEEEEcCCCCceeeeeeecc--------------------------------cccccccccccccccceeEEEEcCCCcE
Q psy10662 154 LYIYYKGLSKHMHAYRFDTV--------------------------------RSMLERDRNEDDTNEFVSAVCWRQLSRV 201 (221)
Q Consensus 154 i~~~d~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 201 (221)
|++||+.+++....+..... -........+.+|...|.+++|+|++++
T Consensus 269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 348 (408)
T 4a11_B 269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE 348 (408)
T ss_dssp EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTE
T ss_pred EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCE
Confidence 99999988765432210000 0011223345678899999999999999
Q ss_pred EEEecCCCeEEEEECCccc
Q psy10662 202 LVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 202 l~~~~~dg~i~iw~~~~~~ 220 (221)
|++++.||.|++|++.+++
T Consensus 349 l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 349 LYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEEEETTSCEEEEEECC--
T ss_pred EEEECCCCeEEEEeCCCCC
Confidence 9999999999999998764
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.3e-33 Score=204.15 Aligned_cols=194 Identities=14% Similarity=0.170 Sum_probs=161.5
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEE------ec-CCcEEEecCCCcEEEEEcCCCc-cceeeec
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKF------LN-KEDIVSASTDSQLKLWNINKPN-CLRSFVG 73 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~------~~-~~~l~s~~~d~~v~~wd~~~~~-~~~~~~~ 73 (221)
++++|++|+.||.|++||+......+..+.+|...|.+++| +| +..|++++.|+.|++||+++++ .+..+..
T Consensus 79 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 158 (357)
T 3i2n_A 79 QQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP 158 (357)
T ss_dssp TTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred CCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc
Confidence 47999999999999999998433378889999999999976 44 4569999999999999999887 6667765
Q ss_pred ccc----ceeEEE----EeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec---CC
Q psy10662 74 HIN----DKNFVG----LATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT---DG 142 (221)
Q Consensus 74 ~~~----~v~~~~----~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~ 142 (221)
|.. .+.+++ |+|++.++++++.|+.|++||+++++.... ..|...+.+++|+| ++
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~~ 224 (357)
T 3i2n_A 159 VQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE--------------TNIKNGVCSLEFDRKDISM 224 (357)
T ss_dssp CTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE--------------EECSSCEEEEEESCSSSSC
T ss_pred cCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee--------------cCCCCceEEEEcCCCCCCC
Confidence 544 788888 788999999999999999999998876432 56788999999999 99
Q ss_pred CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECCcc
Q psy10662 143 DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~ 219 (221)
+++++++.||.|++||+++.+....+... ...+|...|.+++|+|+++ +|++++.||.|++|++.++
T Consensus 225 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 225 NKLVATSLEGKFHVFDMRTQHPTKGFASV----------SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp CEEEEEESTTEEEEEEEEEEETTTEEEEE----------EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred CEEEEECCCCeEEEEeCcCCCcccceeee----------ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 99999999999999999876554443211 1236888999999999998 8999999999999998753
No 85
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-33 Score=213.31 Aligned_cols=213 Identities=17% Similarity=0.216 Sum_probs=165.9
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEe--ccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeee-cccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG--HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFV-GHIN 76 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~-~~~~ 76 (221)
|++.+|++|+.||.|++||+. +++++..+.. |.+.|++++|+|+ ..|++++.||.|++||+++++++..+. .|..
T Consensus 180 ~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 180 EEKSLLVALTNLSRVIIFDIR-TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp SSCEEEEEEETTSEEEEEETT-TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred CCCCEEEEEeCCCeEEEEeCC-CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence 468899999999999999998 7888888888 8999999999985 568999999999999999999888775 6788
Q ss_pred ceeEEEEe----CCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccce-----e------EeeEEE--eeCceEEEEEe
Q psy10662 77 DKNFVGLA----TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM-----L------ESSFVG--HINDKNFVGLA 139 (221)
Q Consensus 77 ~v~~~~~~----~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-----~------~~~~~~--~~~~v~~~~~~ 139 (221)
+|.+++|+ |++.++++++.|+.|++||+++++.+..+........ . ...+.+ |...|.+++|+
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 99999665 4677999999999999999999998887742211000 0 001233 77889999999
Q ss_pred cCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc----------------------cccccccccccccccceeEEEEcC
Q psy10662 140 TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV----------------------RSMLERDRNEDDTNEFVSAVCWRQ 197 (221)
Q Consensus 140 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~v~~~~~~~ 197 (221)
++++|++|+.|+.|++||+.+++....+.-... ............|...|++++|++
T Consensus 339 -~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~ 417 (437)
T 3gre_A 339 -NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCE 417 (437)
T ss_dssp -TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEE
T ss_pred -CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeec
Confidence 779999999999999999999887766542100 000011122334889999999999
Q ss_pred C--CcEEEEecCCCeEEEEE
Q psy10662 198 L--SRVLVAANSQGIIKIYV 215 (221)
Q Consensus 198 ~--~~~l~~~~~dg~i~iw~ 215 (221)
+ +.+|++|+.||.|++|+
T Consensus 418 ~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 418 VDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp SSSSEEEEEEETTSCEEEEC
T ss_pred cCCceEEEEEcCCceEEEeC
Confidence 8 88999999999999995
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=9.3e-33 Score=208.53 Aligned_cols=205 Identities=17% Similarity=0.249 Sum_probs=162.3
Q ss_pred CCCc-eEEEEeCCCeEEEEEecCCc------eeeEEEEeccCceEEEEEec-C-CcEEEecCCCcEEEEEcCCC---ccc
Q psy10662 1 MNSC-HLAFGSADHCVHYYDLRNTK------EALAVFKGHRKAVSYVKFLN-K-EDIVSASTDSQLKLWNINKP---NCL 68 (221)
Q Consensus 1 ~~~~-~l~~~~~dg~i~i~~~~~~~------~~~~~~~~~~~~i~~~~~~~-~-~~l~s~~~d~~v~~wd~~~~---~~~ 68 (221)
|++. +|++|+.||.|++|++.... .....+..|...|.+++|+| + ..|++++.|+.|++||++++ +.+
T Consensus 191 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 191 PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp TTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred CCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence 4556 99999999999999998421 12456778999999999998 3 45789999999999999987 566
Q ss_pred eeeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC-EE
Q psy10662 69 RSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD-YV 145 (221)
Q Consensus 69 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 145 (221)
..+..|...|++++|+|++. ++++++.||.|++||++.. +++. .+..|...|.+++|+|+++ +|
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~-------------~~~~h~~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH-------------SFESHKDEIFQVQWSPHNETIL 337 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE-------------EEECCSSCEEEEEECSSCTTEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeE-------------EeecCCCCEEEEEECCCCCCEE
Confidence 77778999999999999987 6889999999999999873 3333 3467889999999999985 69
Q ss_pred EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECCcc
Q psy10662 146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~ 219 (221)
++++.|+.|++||+.......... ............+.+|...|++++|+|+++ +|++++.||.|++|++...
T Consensus 338 ~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSKIGEEQSTE-DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEETTSCCEEEEGGGTTCCCCHH-HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEEeCCCcEEEEeCCCCccccCcc-ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 999999999999997643211100 000011122334457888999999999999 8999999999999998753
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.6e-32 Score=205.52 Aligned_cols=200 Identities=13% Similarity=0.167 Sum_probs=165.7
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCC-ccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKP-NCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~-~~~~~~~~~~~~v~ 79 (221)
|||++||+|+.||.|+|||+. +++.+..+.+|...+.++.++ +..+++++.|+.+++||.... ..+..+.+|...+.
T Consensus 157 pdg~~lasgs~Dg~v~iWd~~-~~~~~~~~~~h~~~v~~~s~~-~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~ 234 (420)
T 4gga_A 157 KEGNYLAVGTSSAEVQLWDVQ-QQKRLRNMTSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVC 234 (420)
T ss_dssp TTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred CCCCEEEEEECCCeEEEEEcC-CCcEEEEEeCCCCceEEEeeC-CCEEEEEeCCCceeEeeecccceeeEEeccccccee
Confidence 689999999999999999998 788899999999999999886 467999999999999999764 44566788999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCee--------------eEEEE----------------------eecccceeE
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKH--------------MHAYR----------------------FDTVRSMLE 123 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--------------~~~~~----------------------~~~~~~~~~ 123 (221)
.+.++|++.++++++.|+.+++||..+++. +..+. |+.......
T Consensus 235 ~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 235 GLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 314 (420)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred eeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence 999999999999999999999999876532 11111 233333333
Q ss_pred eeEEEeeCceEEEEEecCCCEEEEec--CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE
Q psy10662 124 SSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV 201 (221)
Q Consensus 124 ~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 201 (221)
..+. +...+.++.|+|+++.+++++ .|+.|++||+.+++.+..+. +|...|++++|+|+|++
T Consensus 315 ~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~---------------gH~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 315 SAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---------------GHTSRVLSLTMSPDGAT 378 (420)
T ss_dssp EEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---------------CCSSCEEEEEECTTSSC
T ss_pred eeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc---------------CCCCCEEEEEEcCCCCE
Confidence 3333 345688899999999887654 79999999999888766553 79999999999999999
Q ss_pred EEEecCCCeEEEEECCc
Q psy10662 202 LVAANSQGIIKIYVIPI 218 (221)
Q Consensus 202 l~~~~~dg~i~iw~~~~ 218 (221)
|++|+.|++|++|++..
T Consensus 379 l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 379 VASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEEETTTEEEEECCSC
T ss_pred EEEEecCCeEEEEECCC
Confidence 99999999999999864
No 88
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=9.5e-33 Score=208.48 Aligned_cols=191 Identities=16% Similarity=0.269 Sum_probs=158.5
Q ss_pred CceEEEEeCCCeEEEEEecCC---------ceeeEEEEeccCceEEEEEecC-C-cEEEecCCCcEEEEEcCCCcc----
Q psy10662 3 SCHLAFGSADHCVHYYDLRNT---------KEALAVFKGHRKAVSYVKFLNK-E-DIVSASTDSQLKLWNINKPNC---- 67 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~---------~~~~~~~~~~~~~i~~~~~~~~-~-~l~s~~~d~~v~~wd~~~~~~---- 67 (221)
+.+|++++.||.|++|++... ..++..+.+|...|.+++|+|. . .|++++.||.|++||+..+..
T Consensus 141 ~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 220 (430)
T 2xyi_A 141 ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV 220 (430)
T ss_dssp EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence 679999999999999999831 5677888999999999999974 3 699999999999999987422
Q ss_pred ---ceeeeccccceeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662 68 ---LRSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD 143 (221)
Q Consensus 68 ---~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 143 (221)
...+..|...|.+++|+| ++.+|++++.|+.|++||+++++.. .....+..|...|++++|+|++.
T Consensus 221 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~----------~~~~~~~~~~~~v~~i~~~p~~~ 290 (430)
T 2xyi_A 221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS----------KPSHTVDAHTAEVNCLSFNPYSE 290 (430)
T ss_dssp EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS----------SCSEEEECCSSCEEEEEECSSCT
T ss_pred eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC----------cceeEeecCCCCeEEEEeCCCCC
Confidence 345668999999999999 6778999999999999999876310 11223467889999999999887
Q ss_pred -EEEEecCCCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECCc
Q psy10662 144 -YVACGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 144 -~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~ 218 (221)
++++|+.||.|++||++.. ..+..+ ..|...|.+++|+|+++ +|++++.||.|++||+..
T Consensus 291 ~~l~tg~~dg~v~vwd~~~~~~~~~~~---------------~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 291 FILATGSADKTVALWDLRNLKLKLHSF---------------ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TEEEEEETTSEEEEEETTCTTSCSEEE---------------ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CEEEEEeCCCeEEEEeCCCCCCCeEEe---------------ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 6889999999999999874 333333 36788999999999985 689999999999999976
No 89
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.5e-32 Score=207.71 Aligned_cols=196 Identities=16% Similarity=0.339 Sum_probs=155.6
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF 80 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~ 80 (221)
+++++|++|+.||.|++||+. +++....+.+|.+.|.+++| .++.+++|+.||.|++||+++++.+..+..|...|.+
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 218 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKN-TLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 218 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESS-SCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEE
T ss_pred ECCCEEEEEeCCCeEEEEeCC-CCeEEEEEcCCCCcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEE
Confidence 368899999999999999998 78888899999999999999 5678999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE------------------------------eecccceeEeeEEEee
Q psy10662 81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR------------------------------FDTVRSMLESSFVGHI 130 (221)
Q Consensus 81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~ 130 (221)
++|++ .++++++.||.|++||+++++...... |+......+..+.+|.
T Consensus 219 l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 296 (435)
T 1p22_A 219 LRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK 296 (435)
T ss_dssp EECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC
Confidence 99974 599999999999999998776542110 3444444455555666
Q ss_pred CceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCe
Q psy10662 131 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGI 210 (221)
Q Consensus 131 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 210 (221)
..+.+++++ ++++++|+.||.|++||+++++.+..+ .+|...|.+++| ++++|++|+.||.
T Consensus 297 ~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~---------------~~h~~~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 297 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL---------------EGHEELVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp SCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEE---------------CCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred CcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEE---------------eCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence 666666653 456666666666666666665544433 367888999988 7889999999999
Q ss_pred EEEEECCcc
Q psy10662 211 IKIYVIPIR 219 (221)
Q Consensus 211 i~iw~~~~~ 219 (221)
|++||+.++
T Consensus 358 i~vwd~~~~ 366 (435)
T 1p22_A 358 IKVWDLVAA 366 (435)
T ss_dssp EEEEEHHHH
T ss_pred EEEEECCCC
Confidence 999998654
No 90
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.2e-33 Score=211.00 Aligned_cols=214 Identities=10% Similarity=0.196 Sum_probs=151.5
Q ss_pred CCC--ceEEEEeCCCeEEEEEecCCcee---------------------------------------eEE-EEeccCceE
Q psy10662 1 MNS--CHLAFGSADHCVHYYDLRNTKEA---------------------------------------LAV-FKGHRKAVS 38 (221)
Q Consensus 1 ~~~--~~l~~~~~dg~i~i~~~~~~~~~---------------------------------------~~~-~~~~~~~i~ 38 (221)
|++ .+|++++.||.|++||+. .+.. ... ..+|...|.
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKIS-ERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEE-EEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred CCCCcceEEEeCCCCeEEEEecc-cccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 455 789999999999999997 3222 112 257999999
Q ss_pred EEEEecCCc-EEEecCCCcEEEEEcCC-Cccce-------eeeccccceeEEEEeCCC-CEEEEecCCCeEEEEECCCCe
Q psy10662 39 YVKFLNKED-IVSASTDSQLKLWNINK-PNCLR-------SFVGHINDKNFVGLATDG-DYVACGSENNSLYIYYKGLSK 108 (221)
Q Consensus 39 ~~~~~~~~~-l~s~~~d~~v~~wd~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~ 108 (221)
+++|+|++. |+++ .|+.|++||+++ .+.+. .+..|...|.+++|+|++ .++++++.||.|++||+++++
T Consensus 182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 182 SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 999998654 6676 899999999984 33333 255788999999999998 899999999999999999877
Q ss_pred e----eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC-CCceeeeeeeccccccccccc-
Q psy10662 109 H----MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL-SKHMHAYRFDTVRSMLERDRN- 182 (221)
Q Consensus 109 ~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~- 182 (221)
. +..+..... ......+.+|...|.+++|+|++++|++++. +.|++||+++ ++.+..+..... ....+..
T Consensus 261 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~--~~~~l~~~ 336 (447)
T 3dw8_B 261 LCDRHSKLFEEPED-PSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEY--LRSKLCSL 336 (447)
T ss_dssp SSCTTCEEECCC------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGG--GTTTHHHH
T ss_pred cccceeeEeccCCC-ccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccc--cccccccc
Confidence 5 333310000 0000011122248999999999999999999 9999999987 665555532110 0000000
Q ss_pred -ccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 183 -EDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 183 -~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
....-..+..++|+|++++|++++.||.|++||+.+++
T Consensus 337 ~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp HHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred ccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 00000113459999999999999999999999998764
No 91
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-32 Score=202.41 Aligned_cols=188 Identities=11% Similarity=0.041 Sum_probs=147.9
Q ss_pred EEEEeCCCeEEEEEecC--------CceeeEEEE-eccCceEEEEEec--CC-cEEEecCCCcEEEEEcCCCccceeee-
Q psy10662 6 LAFGSADHCVHYYDLRN--------TKEALAVFK-GHRKAVSYVKFLN--KE-DIVSASTDSQLKLWNINKPNCLRSFV- 72 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~--------~~~~~~~~~-~~~~~i~~~~~~~--~~-~l~s~~~d~~v~~wd~~~~~~~~~~~- 72 (221)
+++|+.|+.|++|+... ..+.+..+. .|.++|.+++|+| ++ .+++++.||.|++||+++++.+....
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 89999999999997652 223233333 5668899999998 54 58889999999999999998866553
Q ss_pred ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeee-EEEEeecccceeEeeEEE-eeCceEEEEEecCCCEEEEecC
Q psy10662 73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHM-HAYRFDTVRSMLESSFVG-HINDKNFVGLATDGDYVACGSE 150 (221)
Q Consensus 73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 150 (221)
.+...+.+++|+|++.++++|+.||.|++||+++++.+ .. +.. |...|++++|+|++.+|++++.
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~-------------~~~~h~~~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSR-------------FPVDEEAKIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEE-------------CCCCTTSCEEEEEECTTSSEEEEEES
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccE-------------EeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 34558999999999999999999999999999988765 33 345 8899999999999999999995
Q ss_pred CCeEEEEEcCCCCceeeeeeecccccccccccccccccce--eEEEEcCCCcEEEEecC-CCeEEEEECCcc
Q psy10662 151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV--SAVCWRQLSRVLVAANS-QGIIKIYVIPIR 219 (221)
Q Consensus 151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~ 219 (221)
+.|++||+++.+....+. .+..|...+ .+++|+|+|++|++++. |+.|++|++..+
T Consensus 235 -~~v~iwd~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 235 -QTVVCFDLRKDVGTLAYP------------TYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp -SBEEEEETTSSTTCBSSC------------CCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred -CeEEEEEcCCCCcceeec------------ccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 499999998876544332 111222333 46999999999999988 999999998643
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.8e-32 Score=204.23 Aligned_cols=188 Identities=14% Similarity=0.214 Sum_probs=159.9
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEe-ccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
++..+++++.||.|++||+. +++....+.. |...|.+++|+|+ ..|++++.||.|++||+.+++.+..+..|...|.
T Consensus 102 s~~~l~~~~~d~~v~lw~~~-~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 180 (401)
T 4aez_A 102 SNLNVVAVALERNVYVWNAD-SGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVG 180 (401)
T ss_dssp CTTSEEEEEETTEEEEEETT-TCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred cCCCEEEEECCCeEEEeeCC-CCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceE
Confidence 35678889999999999998 6666666665 7899999999975 5688999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY 158 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 158 (221)
+++|+ ++++++++.||.|++||++.. +.+. .+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 181 ~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 245 (401)
T 4aez_A 181 CLSWN--RHVLSSGSRSGAIHHHDVRIANHQIG-------------TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWD 245 (401)
T ss_dssp EEEEE--TTEEEEEETTSEEEEEETTSSSCEEE-------------EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEC--CCEEEEEcCCCCEEEEecccCcceee-------------EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEcc
Confidence 99995 569999999999999999843 3332 3578899999999999999999999999999999
Q ss_pred cCCCCceeeeeeecccccccccccccccccceeEEEEcCCC-cEEEEec--CCCeEEEEECCccc
Q psy10662 159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS-RVLVAAN--SQGIIKIYVIPIRV 220 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~dg~i~iw~~~~~~ 220 (221)
+++.+....+. .|...|.+++|+|++ .++++++ .|+.|++||+.+++
T Consensus 246 ~~~~~~~~~~~---------------~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 246 ARSSIPKFTKT---------------NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp TTCSSEEEEEC---------------CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CCCCCccEEec---------------CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 98876655442 578889999999976 4556654 79999999998764
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.3e-32 Score=208.08 Aligned_cols=204 Identities=19% Similarity=0.268 Sum_probs=167.4
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccc---eeeeccccce
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCL---RSFVGHINDK 78 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~---~~~~~~~~~v 78 (221)
++++|++|+.||.|++||+. +++.+..+..|...|.+++|++ +.+++++.||.|++||+++++.. ..+.+|...|
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~-~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v 259 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVN-TGEMLNTLIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 259 (435)
T ss_dssp CSSEEEEEETTSCEEEEESS-SCCEEEEECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCE
T ss_pred CCCEEEEEcCCCeEEEEECC-CCcEEEEEcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcE
Confidence 67899999999999999998 7788899999999999999974 58999999999999999988766 5667899999
Q ss_pred eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------------------------eecccceeEeeEEEeeC
Q psy10662 79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------------------------FDTVRSMLESSFVGHIN 131 (221)
Q Consensus 79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~ 131 (221)
.+++| +++++++++.||.|++||+++++.+..+. |+......+..+.+|..
T Consensus 260 ~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~ 337 (435)
T 1p22_A 260 NVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 337 (435)
T ss_dssp EEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcC
Confidence 99999 67899999999999999999988877665 55566667778888999
Q ss_pred ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662 132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII 211 (221)
Q Consensus 132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 211 (221)
.|.+++| ++++|++|+.||.|++||+.++..... .........+.+|...|.+++| ++++|++++.||.|
T Consensus 338 ~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~------~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i 407 (435)
T 1p22_A 338 LVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRA------PAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTI 407 (435)
T ss_dssp CEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTS------CTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEE
T ss_pred cEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccc------cccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEE
Confidence 9999998 788999999999999999875541100 0000012233578889999999 78899999999999
Q ss_pred EEEECCcc
Q psy10662 212 KIYVIPIR 219 (221)
Q Consensus 212 ~iw~~~~~ 219 (221)
++||+.++
T Consensus 408 ~iwd~~~~ 415 (435)
T 1p22_A 408 LIWDFLND 415 (435)
T ss_dssp EEEC----
T ss_pred EEEECCCC
Confidence 99999764
No 94
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.7e-32 Score=230.18 Aligned_cols=206 Identities=17% Similarity=0.237 Sum_probs=175.2
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
||+++|++|+.||.|++||+. +++.+..+.+|.+.|.+++|+|+ ..+++++.|+.|++||+.+++.+..+.+|...|.
T Consensus 625 ~~~~~l~s~~~d~~i~vw~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~ 703 (1249)
T 3sfz_A 625 QDGQRIASCGADKTLQVFKAE-TGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVN 703 (1249)
T ss_dssp TTSSEEEEEETTSCEEEEETT-TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCCeEEEEECC-CCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEE
Confidence 689999999999999999998 77888899999999999999985 5689999999999999999999999999999999
Q ss_pred EEEEeCC--CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662 80 FVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157 (221)
Q Consensus 80 ~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 157 (221)
+++|+|+ +.++++++.|+.|++||+++++.+.. +.+|...|.+++|+|+++++++++.||.|++|
T Consensus 704 ~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~-------------~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw 770 (1249)
T 3sfz_A 704 CCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNT-------------MFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770 (1249)
T ss_dssp EEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEE-------------ECCCSSCEEEEEECSSTTEEEEEESSSEEEEE
T ss_pred EEEEecCCCceEEEEEeCCCeEEEEECCCcchhhe-------------ecCCCCCEEEEEEecCCCEEEEEECCCeEEEE
Confidence 9999994 55899999999999999998887655 36899999999999999999999999999999
Q ss_pred EcCCCCceeeeeeec-----------------------ccccc-----------------cccccccccccceeEEEEcC
Q psy10662 158 YKGLSKHMHAYRFDT-----------------------VRSML-----------------ERDRNEDDTNEFVSAVCWRQ 197 (221)
Q Consensus 158 d~~~~~~~~~~~~~~-----------------------~~~~~-----------------~~~~~~~~~~~~v~~~~~~~ 197 (221)
|+.++.....+.... .+..+ .......+|...|.+++|+|
T Consensus 771 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 771 DVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp EGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred eCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 998876655443211 00000 00001126788899999999
Q ss_pred CCcEEEEecCCCeEEEEECCccc
Q psy10662 198 LSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 198 ~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+++++++++.||.|++|++.+++
T Consensus 851 ~~~~l~~~~~dg~v~vwd~~~~~ 873 (1249)
T 3sfz_A 851 YDHLAVIALSQYCVELWNIDSRL 873 (1249)
T ss_dssp STTEEEEECSSSCEEEEETTTTE
T ss_pred CCCEEEEEeCCCeEEEEEcCCCc
Confidence 99999999999999999998754
No 95
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.7e-32 Score=199.61 Aligned_cols=181 Identities=13% Similarity=0.191 Sum_probs=146.1
Q ss_pred ceeeEEEEeccCceEEEEE-----ec--CCcEEEecCCCcEEEEEcCCC-------ccceeeeccccceeEEEEeCCCCE
Q psy10662 24 KEALAVFKGHRKAVSYVKF-----LN--KEDIVSASTDSQLKLWNINKP-------NCLRSFVGHINDKNFVGLATDGDY 89 (221)
Q Consensus 24 ~~~~~~~~~~~~~i~~~~~-----~~--~~~l~s~~~d~~v~~wd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~ 89 (221)
......+.+|.+.|++++| ++ +..|++|+.|++|++||+.+. .+...+.+|...|.+++|+|++.+
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 3456788999999999999 54 456999999999999999753 345567889999999999999999
Q ss_pred EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCC------
Q psy10662 90 VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK------ 163 (221)
Q Consensus 90 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~------ 163 (221)
+++++.|+.|++||+++++.+.. +.+|...|.+++|+|++++|++++.|+.|++||+....
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~-------------~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 157 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKR-------------FVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAE 157 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEE-------------EECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCT
T ss_pred EEEEcCCCcEEEEECCCCcEEEE-------------EcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeec
Confidence 99999999999999998877655 47899999999999999999999999999999986321
Q ss_pred ------ceeeeeeecccc--------------------------cccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662 164 ------HMHAYRFDTVRS--------------------------MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII 211 (221)
Q Consensus 164 ------~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 211 (221)
.+..+.+.+... .......+.+|...|.+++|+|+|++|++++.||.|
T Consensus 158 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v 237 (343)
T 2xzm_R 158 KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL 237 (343)
T ss_dssp TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeE
Confidence 112222222110 001122345788899999999999999999999999
Q ss_pred EEEECC
Q psy10662 212 KIYVIP 217 (221)
Q Consensus 212 ~iw~~~ 217 (221)
++||+.
T Consensus 238 ~iwd~~ 243 (343)
T 2xzm_R 238 LIWDIL 243 (343)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999994
No 96
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-33 Score=212.51 Aligned_cols=205 Identities=14% Similarity=0.104 Sum_probs=154.0
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEe---ccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKG---HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
++++|++|+.||+|++||++ .+. ...+.. +...+.+++|+|+ ..|++|+.||.|++||++ ++.+..+.+|...
T Consensus 176 ~~~~l~s~s~D~~v~iwd~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~ 252 (435)
T 4e54_B 176 NTNQFYASSMEGTTRLQDFK-GNI-LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKK 252 (435)
T ss_dssp CTTEEEEECSSSCEEEEETT-SCE-EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSC
T ss_pred CCCEEEEEeCCCEEEEeecc-CCc-eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccce
Confidence 67899999999999999997 443 333332 2345789999975 568899999999999986 4566778899999
Q ss_pred eeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662 78 KNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI 156 (221)
Q Consensus 78 v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 156 (221)
|.+++|+|++. ++++++.|+.|++||+++.+....+ ....+|...|++++|+|++++|++++.||.|++
T Consensus 253 v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~----------~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~i 322 (435)
T 4e54_B 253 VTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF----------LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRV 322 (435)
T ss_dssp EEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC----------SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEE
T ss_pred EEeeeecCCCceEEEEecCcceeeEEecccccccceE----------EEeeeccccccceeECCCCCeeEEEcCCCEEEE
Confidence 99999999986 6889999999999999876543322 123578899999999999999999999999999
Q ss_pred EEcCCCCceeeeee----------------eccc---------------------cccc--------ccc-cccccccce
Q psy10662 157 YYKGLSKHMHAYRF----------------DTVR---------------------SMLE--------RDR-NEDDTNEFV 190 (221)
Q Consensus 157 ~d~~~~~~~~~~~~----------------~~~~---------------------~~~~--------~~~-~~~~~~~~v 190 (221)
||+.++.....+.. .+.. .... ... ...+|...|
T Consensus 323 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v 402 (435)
T 4e54_B 323 YSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGI 402 (435)
T ss_dssp EESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCC
T ss_pred EECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcE
Confidence 99987664433211 0000 0000 000 123566778
Q ss_pred eEE-EEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 191 SAV-CWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 191 ~~~-~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.++ +|+|+|++|++|+ |+.|++|++++++
T Consensus 403 ~s~~~fspdg~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 403 SSLNEFNPMGDTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp CCEEEECTTSSCEEEEC-SSEEEECCCC---
T ss_pred EEEEEECCCCCEEEEEc-CCcEEEEECCcCe
Confidence 877 6999999999986 8899999999875
No 97
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-32 Score=199.28 Aligned_cols=190 Identities=10% Similarity=0.136 Sum_probs=165.6
Q ss_pred CCCceEEEEeCC-----CeEEEEEecCCc----------eeeEEEEeccC--ceEEEEEec-CCcEEEecCCCcEEEEEc
Q psy10662 1 MNSCHLAFGSAD-----HCVHYYDLRNTK----------EALAVFKGHRK--AVSYVKFLN-KEDIVSASTDSQLKLWNI 62 (221)
Q Consensus 1 ~~~~~l~~~~~d-----g~i~i~~~~~~~----------~~~~~~~~~~~--~i~~~~~~~-~~~l~s~~~d~~v~~wd~ 62 (221)
|++++|++++.+ |.|++||+.... .....+..|.. .+.+++|+| +..+++++.||.|++||+
T Consensus 125 ~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 204 (369)
T 3zwl_B 125 PCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDV 204 (369)
T ss_dssp TTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred cCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 678999999999 999999997332 24455566666 899999997 456889999999999999
Q ss_pred CC-CccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC
Q psy10662 63 NK-PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD 141 (221)
Q Consensus 63 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 141 (221)
++ .+.+..+..|...|.+++|+|++.+|++++.|+.|++||+++++.+..+ .+...+..++|+|+
T Consensus 205 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--------------~~~~~~~~~~~~~~ 270 (369)
T 3zwl_B 205 SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY--------------ETDCPLNTAVITPL 270 (369)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--------------ECSSCEEEEEECSS
T ss_pred CCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee--------------cCCCCceeEEecCC
Confidence 98 6788888889999999999999999999999999999999998877654 26678999999999
Q ss_pred CCEEEEecCCC--------------eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662 142 GDYVACGSENN--------------SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS 207 (221)
Q Consensus 142 ~~~l~~~~~d~--------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 207 (221)
++++++++.++ .+++||+.+++....+. +|...|.+++|+|++++|++++.
T Consensus 271 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---------------~~~~~v~~~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 271 KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ---------------GHFGPLNTVAISPQGTSYASGGE 335 (369)
T ss_dssp SSEEEEEECCC-------------CEEEEEETTTCCEEEEEE---------------CCSSCEEEEEECTTSSEEEEEET
T ss_pred CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee---------------cccCcEEEEEECCCCCEEEEEcC
Confidence 99999999988 89999988887665553 68889999999999999999999
Q ss_pred CCeEEEEECCcc
Q psy10662 208 QGIIKIYVIPIR 219 (221)
Q Consensus 208 dg~i~iw~~~~~ 219 (221)
||.|++|+++++
T Consensus 336 dg~v~iw~~~~~ 347 (369)
T 3zwl_B 336 DGFIRLHHFEKS 347 (369)
T ss_dssp TSEEEEEEECHH
T ss_pred CCeEEEEECccc
Confidence 999999999865
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-32 Score=205.39 Aligned_cols=203 Identities=13% Similarity=0.163 Sum_probs=164.6
Q ss_pred CCCceE-EEEeCCCeEEEEEecC-CceeeEEEE--eccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccce----ee
Q psy10662 1 MNSCHL-AFGSADHCVHYYDLRN-TKEALAVFK--GHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLR----SF 71 (221)
Q Consensus 1 ~~~~~l-~~~~~dg~i~i~~~~~-~~~~~~~~~--~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~----~~ 71 (221)
|++++| ++|+.||.|++||+.. .++.+..+. .|...|.+++|+|+ ..|++++.+|.+++|++.+++... .+
T Consensus 112 ~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~ 191 (450)
T 2vdu_B 112 SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPI 191 (450)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCS
T ss_pred CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceee
Confidence 678886 8999999999999972 355666665 56789999999985 568899999999999998877554 67
Q ss_pred eccccceeEEEEeCC---CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe
Q psy10662 72 VGHINDKNFVGLATD---GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG 148 (221)
Q Consensus 72 ~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 148 (221)
.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+ +.+|...|.+++|+ ++++|+++
T Consensus 192 ~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~------------~~~h~~~v~~~~~s-d~~~l~s~ 258 (450)
T 2vdu_B 192 LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW------------LFGHKHFVSSICCG-KDYLLLSA 258 (450)
T ss_dssp EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE------------CCCCSSCEEEEEEC-STTEEEEE
T ss_pred ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee------------ecCCCCceEEEEEC-CCCEEEEE
Confidence 789999999999999 899999999999999999888766543 35788999999999 99999999
Q ss_pred cCCCeEEEEEcCCCCceeeeeeecccccccc----------cccccccccceeEEEEcCCCcEEEEec-CCCeEEEEEC
Q psy10662 149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLER----------DRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVI 216 (221)
Q Consensus 149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~ 216 (221)
+.|+.|++||+++++.+..+........... ..........|.+++|+|++++|++++ .|+.|++|++
T Consensus 259 ~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 259 GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 9999999999999988777653221000000 000012345789999999999999998 8999999999
No 99
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.4e-32 Score=205.00 Aligned_cols=183 Identities=18% Similarity=0.313 Sum_probs=150.7
Q ss_pred eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec--C-CcEEEecCCCcEEEEEcC------------------
Q psy10662 5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN--K-EDIVSASTDSQLKLWNIN------------------ 63 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--~-~~l~s~~~d~~v~~wd~~------------------ 63 (221)
+|++|+.||.|++||+. +++.+..+.+|.+.|.+++|++ + ..+++++.|+.|++||++
T Consensus 175 ~l~s~s~dg~i~vwd~~-~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIK-KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp EEEEEETTSCEEEEETT-TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred EEEEEeCCCCEEEEECC-CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 88999999999999998 6778888888999999998873 2 346666666666666654
Q ss_pred ---------------------------------------------CCccceeeeccccceeEEEEeCCCCEEEEecCCCe
Q psy10662 64 ---------------------------------------------KPNCLRSFVGHINDKNFVGLATDGDYVACGSENNS 98 (221)
Q Consensus 64 ---------------------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 98 (221)
+++.+..+.+|...|.+++|+|+++++++++.|+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~ 333 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT 333 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred eccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc
Confidence 33444455578889999999999999999999999
Q ss_pred EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccc
Q psy10662 99 LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 178 (221)
Q Consensus 99 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~ 178 (221)
|++||+++++.+..+ .+|...|.+++|+ ++++++++.||.|++||+.+.......
T Consensus 334 i~vwd~~~~~~~~~~-------------~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~---------- 388 (464)
T 3v7d_B 334 IRIWDLENGELMYTL-------------QGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY---------- 388 (464)
T ss_dssp EEEEETTTTEEEEEE-------------CCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE----------
T ss_pred EEEEECCCCcEEEEE-------------eCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee----------
Confidence 999999988877654 6788999999997 579999999999999999887654333
Q ss_pred ccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 179 RDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 179 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.+...+..++|+|++++|++++ ||.|++||+++++
T Consensus 389 ------~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 389 ------HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp ------ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred ------cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc
Confidence 2455677889999999999998 8999999999876
No 100
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.2e-32 Score=205.74 Aligned_cols=183 Identities=20% Similarity=0.343 Sum_probs=140.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF 80 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~ 80 (221)
+++++|++|+.||.|++||+. +++.+..+.+|.+.|.+++|+ ++.+++++.||.|++||+.+++.+..+.+|...|.+
T Consensus 127 ~~g~~l~sg~~dg~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 204 (445)
T 2ovr_B 127 FCGNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 204 (445)
T ss_dssp EETTEEEEEETTSCEEEEETT-TCCEEEECCCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EcCCEEEEEECCCcEEEEECC-CCcEEEEEcCCCCCEEEEEec-CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEE
Confidence 367899999999999999998 778888999999999999998 568999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662 81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG 160 (221)
Q Consensus 81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 160 (221)
+.|+ ++.+++++.||.|++||+.+++.+..+ .+|...+.+++| +++++++++.||.|++||++
T Consensus 205 ~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~-------------~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~ 267 (445)
T 2ovr_B 205 MHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-------------MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE 267 (445)
T ss_dssp EEEE--TTEEEEEETTSEEEEEESSSCCEEEEE-------------ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGG
T ss_pred EEec--CCEEEEEeCCCEEEEEECCCCcEEEEE-------------cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECC
Confidence 9996 568999999999999999988776554 456666666666 45666666667777777666
Q ss_pred CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
+++.+..+. +|...|.+++| +++++++++.||.|++||+.++
T Consensus 268 ~~~~~~~~~---------------~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 268 TETCLHTLQ---------------GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp GTEEEEEEC---------------CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC
T ss_pred CCcEeEEec---------------CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC
Confidence 554443332 34444555554 4445555555555555555443
No 101
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.3e-32 Score=203.07 Aligned_cols=204 Identities=12% Similarity=0.195 Sum_probs=162.7
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEe-----ccCceEEEEEecC-----CcEEEecCCCcEEEEEcCCCccceeee
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKG-----HRKAVSYVKFLNK-----EDIVSASTDSQLKLWNINKPNCLRSFV 72 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~-----~~l~s~~~d~~v~~wd~~~~~~~~~~~ 72 (221)
...+++++.++.|++||+. .++.+..+.. |...|.+++|+|+ ..|++++.||.|++||+.+++.+..+.
T Consensus 34 ~~~~~~~~~~~~v~vw~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 112 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECH-SQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp SCEEEEEEETTEEEEEEEC-GGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE
T ss_pred CceEEEECCCCEEEEEEcC-CCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec
Confidence 3456666677799999998 5555566654 4477999999975 359999999999999999999999999
Q ss_pred ccccceeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662 73 GHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN 151 (221)
Q Consensus 73 ~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 151 (221)
+|...|.+++|+| ++.++++++.||.|++||+++++.+..+ ..+.+|...|.+++|+|++++|++++.|
T Consensus 113 ~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF----------GGVEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE----------CSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe----------cccccccCceeEEEECCCCCEEEEecCC
Confidence 9999999999999 8999999999999999999988776553 1124688899999999999999999999
Q ss_pred CeEEEEEcCCCCceeeeee----eccc---------ccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 152 NSLYIYYKGLSKHMHAYRF----DTVR---------SMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 152 ~~i~~~d~~~~~~~~~~~~----~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
|.|++||+++++....+.. .+.. ...........|...|.+++|+ +++|++++.||.|++||+.+
T Consensus 183 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~ 260 (366)
T 3k26_A 183 HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGK 260 (366)
T ss_dssp SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESS
T ss_pred CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCC
Confidence 9999999987765433221 0000 0011112233588899999998 78999999999999999876
Q ss_pred c
Q psy10662 219 R 219 (221)
Q Consensus 219 ~ 219 (221)
+
T Consensus 261 ~ 261 (366)
T 3k26_A 261 M 261 (366)
T ss_dssp T
T ss_pred c
Confidence 4
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8.2e-32 Score=225.97 Aligned_cols=202 Identities=18% Similarity=0.289 Sum_probs=175.3
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC---CcEEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK---EDIVSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
|++++|++|+.||.|++||+. +++.+..+.+|...|.+++|+|+ ..+++++.|+.|++||+++++.+..+.+|...
T Consensus 667 ~~~~~l~s~~~d~~v~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~ 745 (1249)
T 3sfz_A 667 SDDSYIATCSADKKVKIWDSA-TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNS 745 (1249)
T ss_dssp TTSSEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSC
T ss_pred cCCCEEEEEeCCCeEEEEECC-CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCC
Confidence 689999999999999999998 78889999999999999999973 24889999999999999999999999999999
Q ss_pred eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe-----------------------------------------e
Q psy10662 78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF-----------------------------------------D 116 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----------------------------------------~ 116 (221)
|.+++|+|+++++++++.||.|++||+.+++....+.. +
T Consensus 746 v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d 825 (1249)
T 3sfz_A 746 VNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD 825 (1249)
T ss_dssp EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEE
T ss_pred EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEE
Confidence 99999999999999999999999999988877665531 1
Q ss_pred cccceeEeeE-EEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE
Q psy10662 117 TVRSMLESSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW 195 (221)
Q Consensus 117 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 195 (221)
.........+ .+|...+.+++|+|+++++++++.|+.|++||+.++.....+ .+|...|.+++|
T Consensus 826 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~---------------~~h~~~v~~v~~ 890 (1249)
T 3sfz_A 826 IHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADC---------------RGHLSWVHGVMF 890 (1249)
T ss_dssp TTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEE---------------CCCSSCEEEEEE
T ss_pred ecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeec---------------CCCccceEEEEE
Confidence 1222222222 267788999999999999999999999999999887665544 378889999999
Q ss_pred cCCCcEEEEecCCCeEEEEECCc
Q psy10662 196 RQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 196 ~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
+|+|++|++++.||.|++|++.+
T Consensus 891 spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 891 SPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEEHHH
T ss_pred CCCCCEEEEEeCCCeEEEEEccc
Confidence 99999999999999999999754
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-32 Score=205.41 Aligned_cols=162 Identities=15% Similarity=0.198 Sum_probs=137.7
Q ss_pred CceEEEEEecCC-cE-EEecCCCcEEEEEcC--CCccceeee--ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCe
Q psy10662 35 KAVSYVKFLNKE-DI-VSASTDSQLKLWNIN--KPNCLRSFV--GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK 108 (221)
Q Consensus 35 ~~i~~~~~~~~~-~l-~s~~~d~~v~~wd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~ 108 (221)
+.|.+++|+|++ .| ++++.||.|++||+. +++.+..+. .|...|.+++|+|++++|++++.+|.+.+|++.+++
T Consensus 103 ~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 103 SYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp CCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred CceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcc
Confidence 369999999855 44 788899999999999 888887775 456889999999999999999999999999998765
Q ss_pred eeEEEEeecccceeEeeEEEeeCceEEEEEecC---CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccc
Q psy10662 109 HMHAYRFDTVRSMLESSFVGHINDKNFVGLATD---GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD 185 (221)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (221)
.... ....+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+ ..+
T Consensus 183 ~~~~---------~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~--------------~~~ 239 (450)
T 2vdu_B 183 EEKF---------TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW--------------LFG 239 (450)
T ss_dssp CSSC---------CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE--------------CCC
T ss_pred cccc---------cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee--------------ecC
Confidence 4320 11235688999999999999 999999999999999999887765442 136
Q ss_pred cccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 186 TNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 186 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
|...|.+++|+ ++++|++++.|+.|++||+.+++
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 88899999999 99999999999999999998875
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-32 Score=217.86 Aligned_cols=196 Identities=17% Similarity=0.186 Sum_probs=163.7
Q ss_pred CceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecC---CcEEEecCCCcEEEEEcCCCc--cceeeeccc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNK---EDIVSASTDSQLKLWNINKPN--CLRSFVGHI 75 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~--~~~~~~~~~ 75 (221)
+++|++|+.||.|++||+. +++ .+..+..|...|.+++|+|+ ..+++++.||.|++||++++. ....+..|.
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~-~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~ 145 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEE-NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (753)
T ss_dssp CSEEEEEETTSCEEEEEEE-TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCS
T ss_pred CCEEEEEeCCCeEEEEECC-CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCC
Confidence 8999999999999999998 454 66778889999999999974 569999999999999998873 344567889
Q ss_pred cceeEEEEeC-------------CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-
Q psy10662 76 NDKNFVGLAT-------------DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD- 141 (221)
Q Consensus 76 ~~v~~~~~~~-------------~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 141 (221)
..|.+++|+| ++.++++++.||.|++||++++.... .....+.+|...|++++|+|+
T Consensus 146 ~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~---------~~~~~~~~h~~~V~~l~~sp~~ 216 (753)
T 3jro_A 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY---------VLESTLEGHSDWVRDVAWSPTV 216 (753)
T ss_dssp SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEE---------EEEEEECCCSSCEEEEEECCCC
T ss_pred CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccc---------eeeeeecCCCCcEEEEEeccCC
Confidence 9999999999 58899999999999999998764321 123446788999999999999
Q ss_pred --CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 142 --GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 142 --~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
++++++++.||.|++||+.++..... ........|...|.+++|+|+|++|++++.||.|++|++.+
T Consensus 217 ~~~~~l~s~s~Dg~I~iwd~~~~~~~~~----------~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 217 LLRSYLASVSQDRTCIIWTQDNEQGPWK----------KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSEEEEEEESSSCEEEEEESSSSSCCB----------CCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCCEEEEEecCCEEEEecCCCCCCcce----------eEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 89999999999999999987642111 11223345788899999999999999999999999999984
No 105
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=7e-31 Score=199.05 Aligned_cols=202 Identities=18% Similarity=0.316 Sum_probs=165.7
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV 81 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~ 81 (221)
+++.|++|+.||.|++||+. +++.+..+.+|...|.+++| .+..+++++.||.|++||+++++.+..+.+|...|.++
T Consensus 208 ~~~~l~s~s~dg~i~~wd~~-~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 285 (445)
T 2ovr_B 208 HEKRVVSGSRDATLRVWDIE-TGQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 285 (445)
T ss_dssp ETTEEEEEETTSEEEEEESS-SCCEEEEEECCSSCEEEEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEE
T ss_pred cCCEEEEEeCCCEEEEEECC-CCcEEEEEcCCcccEEEEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEE
Confidence 35678888899999999987 67777888888888999888 56678888999999999998888888888888889998
Q ss_pred EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE---------------------------eecccceeEeeEEE---eeC
Q psy10662 82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYR---------------------------FDTVRSMLESSFVG---HIN 131 (221)
Q Consensus 82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~---~~~ 131 (221)
.| ++.++++++.|+.|++||+++++.+..+. |+.........+.. |..
T Consensus 286 ~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 363 (445)
T 2ovr_B 286 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 363 (445)
T ss_dssp EE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS
T ss_pred EE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC
Confidence 88 67889999999999999998887776553 44445555555554 778
Q ss_pred ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCe-
Q psy10662 132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGI- 210 (221)
Q Consensus 132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~- 210 (221)
.|.+++|+ ++++++|+.||.|++||+.+++.+..+... ....|...|.+++|+|++.+|++++.||.
T Consensus 364 ~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----------~~~~~~~~v~~~~~s~~~~~la~~~~dg~~ 431 (445)
T 2ovr_B 364 AVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTL----------ESGGSGGVVWRIRASNTKLVCAVGSRNGTE 431 (445)
T ss_dssp CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEEC----------TTGGGTCEEEEEEECSSEEEEEEECSSSSS
T ss_pred CEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeecc----------ccCCCCceEEEEEecCCEEEEEEcccCCCC
Confidence 89999986 579999999999999999998877665311 11257788999999999999999999997
Q ss_pred ---EEEEECCcc
Q psy10662 211 ---IKIYVIPIR 219 (221)
Q Consensus 211 ---i~iw~~~~~ 219 (221)
|.+||+...
T Consensus 432 ~~~l~v~df~~~ 443 (445)
T 2ovr_B 432 ETKLLVLDFDVD 443 (445)
T ss_dssp CCEEEEEECCCC
T ss_pred ccEEEEEECCCC
Confidence 999999753
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=4.5e-31 Score=194.66 Aligned_cols=203 Identities=15% Similarity=0.116 Sum_probs=152.4
Q ss_pred CCceE-EEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC----------------------------------
Q psy10662 2 NSCHL-AFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE---------------------------------- 46 (221)
Q Consensus 2 ~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------------------------------- 46 (221)
+++.+ ++|+.|+.|++||+. +++++..+. +...|.+++|+++.
T Consensus 69 ~~~~~~~~~~~d~~v~iWd~~-~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s 146 (355)
T 3vu4_A 69 RTNYVAFVTGVKEVVHIWDDV-KKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFS 146 (355)
T ss_dssp TSSEEEEECSSTTEEEEEETT-TTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEE
T ss_pred CCCEEEEEECCccEEEEEECC-CCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEE
Confidence 34445 577888999999998 677777776 67788888887532
Q ss_pred --cEEE--ecCCCcEEEEEcCCCc----------------cceeeeccccceeEEEEeCCCCEEEEecCCCe-EEEEECC
Q psy10662 47 --DIVS--ASTDSQLKLWNINKPN----------------CLRSFVGHINDKNFVGLATDGDYVACGSENNS-LYIYYKG 105 (221)
Q Consensus 47 --~l~s--~~~d~~v~~wd~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-v~iwd~~ 105 (221)
.++. ++.||.|++||+++++ .+..+.+|...|.+++|+|++++|++++.|++ |++||++
T Consensus 147 ~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 147 NGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp TTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred ccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 2333 5789999999998765 26778899999999999999999999999998 9999999
Q ss_pred CCeeeEEEEeecccceeEeeEE-E-eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc--------cc
Q psy10662 106 LSKHMHAYRFDTVRSMLESSFV-G-HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV--------RS 175 (221)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--------~~ 175 (221)
+++.+..+ . + |...|.+++|+|++++|++++.|+.|++||++.........+... ..
T Consensus 227 ~~~~~~~~-------------~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (355)
T 3vu4_A 227 DGVLVREF-------------RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEW 293 (355)
T ss_dssp TCCEEEEE-------------ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSS
T ss_pred CCcEEEEE-------------EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccc
Confidence 98887664 4 4 889999999999999999999999999999976543221111000 00
Q ss_pred cccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 176 MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
.................++|++++++|++++.||.+++|++..+
T Consensus 294 ~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 294 SLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 00000001112233467999999999999999999999998754
No 107
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9.1e-32 Score=210.94 Aligned_cols=188 Identities=15% Similarity=0.158 Sum_probs=162.9
Q ss_pred CCCceEEEEeCCCeEEEEEecCCc----eeeEEEEeccCc-eEEEEEec--CC-cEEEecCCCcEEEEEcCCC-------
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTK----EALAVFKGHRKA-VSYVKFLN--KE-DIVSASTDSQLKLWNINKP------- 65 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~----~~~~~~~~~~~~-i~~~~~~~--~~-~l~s~~~d~~v~~wd~~~~------- 65 (221)
||+++|++++ ++.|++||+. ++ +....+.+|... |++++|+| ++ .|++++.||.|++||+.++
T Consensus 28 pdg~~l~~~~-~~~v~v~~~~-~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 105 (615)
T 1pgu_A 28 PTTNAIAYPC-GKSAFVRCLD-DGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVE 105 (615)
T ss_dssp TTTTEEEEEE-TTEEEEEECC-SSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEE
T ss_pred CCCCEEEEec-CCeEEEEECC-CCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccccc
Confidence 6899999998 8899999998 66 778889999999 99999998 65 4889999999999999754
Q ss_pred -ccceeeeccccceeEEEEeCCCCEEEEecCC----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662 66 -NCLRSFVGHINDKNFVGLATDGDYVACGSEN----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT 140 (221)
Q Consensus 66 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 140 (221)
+....+..|...|.+++|+|+++++++++.+ +.|.+|| .++.+. .+.+|...|.+++|+|
T Consensus 106 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~-------------~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 106 VNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLG-------------EVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEE-------------ECCSCSSCEEEEEECS
T ss_pred ccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcce-------------eeecCCccEEEEEECC
Confidence 6666777899999999999999999999887 6888888 344433 3468899999999999
Q ss_pred CCC-EEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccc---ceeEEEEcCC-CcEEEEecCCCeEEEEE
Q psy10662 141 DGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNE---FVSAVCWRQL-SRVLVAANSQGIIKIYV 215 (221)
Q Consensus 141 ~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~dg~i~iw~ 215 (221)
+++ .+++++.|+.|++||+.+.+....+. .|.. .|.+++|+|+ +++|++++.||.|++||
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~---------------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd 235 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPPFKFSASDR---------------THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 235 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTTBEEEEEEC---------------SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEE
T ss_pred CCCcEEEEEeCCCcEEEEeCCCcceeeeec---------------ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 998 89999999999999988776655443 5666 8999999999 99999999999999999
Q ss_pred CCccc
Q psy10662 216 IPIRV 220 (221)
Q Consensus 216 ~~~~~ 220 (221)
+.+++
T Consensus 236 ~~~~~ 240 (615)
T 1pgu_A 236 GKSGE 240 (615)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 98764
No 108
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8e-31 Score=191.79 Aligned_cols=199 Identities=13% Similarity=0.176 Sum_probs=148.4
Q ss_pred EEEeCCCe--EEEEEecC-CceeeEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCCCc-----cceeeecccc
Q psy10662 7 AFGSADHC--VHYYDLRN-TKEALAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINKPN-----CLRSFVGHIN 76 (221)
Q Consensus 7 ~~~~~dg~--i~i~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~~~-----~~~~~~~~~~ 76 (221)
.+|...|+ ++++...+ +..+..++++|.+.|++|+|+|+ ..|+||+.|++|++||+.+.+ +...+.+|..
T Consensus 8 ~~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~ 87 (340)
T 4aow_A 8 SSGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH 87 (340)
T ss_dssp ------------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSS
T ss_pred ccccCCCCccEEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCC
Confidence 44544454 33334331 23455689999999999999984 468899999999999997654 3456788999
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE-----------------------------eecccc-eeEeeE
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRS-MLESSF 126 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~-~~~~~~ 126 (221)
.|.+++|+|+++++++++.|+.|++|+........... |+.... ......
T Consensus 88 ~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~ 167 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 167 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred CEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEe
Confidence 99999999999999999999999999998876655443 111111 112233
Q ss_pred EEeeCceEEEEEecCC--CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE
Q psy10662 127 VGHINDKNFVGLATDG--DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA 204 (221)
Q Consensus 127 ~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 204 (221)
.+|...+..++|++++ .++++++.|+.|++||+++.+....+. +|...|++++|+|++++|++
T Consensus 168 ~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~---------------~h~~~v~~~~~s~~~~~l~s 232 (340)
T 4aow_A 168 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI---------------GHTGYLNTVTVSPDGSLCAS 232 (340)
T ss_dssp SSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC---------------CCSSCEEEEEECTTSSEEEE
T ss_pred ccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec---------------CCCCcEEEEEECCCCCEEEE
Confidence 4677889999998764 578899999999999998877655443 68889999999999999999
Q ss_pred ecCCCeEEEEECCccc
Q psy10662 205 ANSQGIIKIYVIPIRV 220 (221)
Q Consensus 205 ~~~dg~i~iw~~~~~~ 220 (221)
++.||.|++||+.+++
T Consensus 233 ~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 233 GGKDGQAMLWDLNEGK 248 (340)
T ss_dssp EETTCEEEEEETTTTE
T ss_pred EeCCCeEEEEEeccCc
Confidence 9999999999998754
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.5e-31 Score=206.99 Aligned_cols=192 Identities=13% Similarity=0.143 Sum_probs=164.1
Q ss_pred CCceEEEEeCCCeEEEEEecCC-------ceeeEEEEeccCceEEEEEecCC-cEEEecCC----CcEEEEEcCCCccce
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNT-------KEALAVFKGHRKAVSYVKFLNKE-DIVSASTD----SQLKLWNINKPNCLR 69 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d----~~v~~wd~~~~~~~~ 69 (221)
++++|++|+.||.|++||+.+. .+....+..|..+|.+++|+|++ .|++++.+ +.|++|| .++.+.
T Consensus 77 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~ 154 (615)
T 1pgu_A 77 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLG 154 (615)
T ss_dssp TCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEE
T ss_pred CCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcce
Confidence 8999999999999999999622 36677888899999999999854 57788777 6888888 567778
Q ss_pred eeeccccceeEEEEeCCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC---ceEEEEEecC-CCE
Q psy10662 70 SFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN---DKNFVGLATD-GDY 144 (221)
Q Consensus 70 ~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~ 144 (221)
.+.+|...|.+++|+|+++ .+++++.|+.|++||+.+++.+..+ .+|.. .|.+++|+|+ +++
T Consensus 155 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~-------------~~~~~~~~~v~~~~~~~~~~~~ 221 (615)
T 1pgu_A 155 EVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD-------------RTHHKQGSFVRDVEFSPDSGEF 221 (615)
T ss_dssp ECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE-------------CSSSCTTCCEEEEEECSTTCCE
T ss_pred eeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee-------------cccCCCCceEEEEEECCCCCCE
Confidence 8889999999999999998 7999999999999999888776554 56777 8999999999 999
Q ss_pred EEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 145 VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 145 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
|++++.|+.|++||+++++.+..+.. ....|...|.+++|+ ++++|++++.|+.|++||+.+++
T Consensus 222 l~~~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 222 VITVGSDRKISCFDGKSGEFLKYIED-----------DQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp EEEEETTCCEEEEETTTCCEEEECCB-----------TTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEEeCCCeEEEEECCCCCEeEEecc-----------cccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCc
Confidence 99999999999999988776554410 001577899999999 99999999999999999998764
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.5e-31 Score=193.19 Aligned_cols=197 Identities=12% Similarity=0.151 Sum_probs=146.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcE-EEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDI-VSASTDSQLKLWNINKPNCLRSFVGHINDK 78 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v 78 (221)
|||++|++|+.++ +++|++. ..+...... ...+..+++.+ ++.+ ++++.|+.|++||+.+++.+..+. +...|
T Consensus 29 ~dg~~la~g~~~~-~~iw~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v 103 (355)
T 3vu4_A 29 QDQSCLILSTLKS-FEIYNVH-PVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPV 103 (355)
T ss_dssp TTSSEEEEECSSE-EEEEEET-TEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCE
T ss_pred CCCCEEEEEcCCE-EEEEecC-Ccceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCce
Confidence 6899999998775 7899997 555444433 23577778875 3444 578889999999999999888876 66789
Q ss_pred eEEEEeCCCCEEEEecCCCeEEEEECCCC-eeeEEE--------------------------Eeecccce----------
Q psy10662 79 NFVGLATDGDYVACGSENNSLYIYYKGLS-KHMHAY--------------------------RFDTVRSM---------- 121 (221)
Q Consensus 79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~--------------------------~~~~~~~~---------- 121 (221)
.+++|+++. ++++ .++.|++||+.+. +.+..+ -|+.....
T Consensus 104 ~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~ 180 (355)
T 3vu4_A 104 KDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQ 180 (355)
T ss_dssp EEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------
T ss_pred EEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcccccccccc
Confidence 999998753 2222 2445666665544 111100 01222111
Q ss_pred -----e-EeeEEEeeCceEEEEEecCCCEEEEecCCCe-EEEEEcCCCCceeeeeeecccccccccccccc-cccceeEE
Q psy10662 122 -----L-ESSFVGHINDKNFVGLATDGDYVACGSENNS-LYIYYKGLSKHMHAYRFDTVRSMLERDRNEDD-TNEFVSAV 193 (221)
Q Consensus 122 -----~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~ 193 (221)
+ ...+.+|...|.+++|+|++++|++|+.|+. |++||+++++.+..+. .+ |...|.++
T Consensus 181 ~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~--------------~g~h~~~v~~~ 246 (355)
T 3vu4_A 181 QKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR--------------RGLDRADVVDM 246 (355)
T ss_dssp ------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE--------------CTTCCSCEEEE
T ss_pred ccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE--------------cCCCCCcEEEE
Confidence 1 4567889999999999999999999999998 9999999888776653 13 78899999
Q ss_pred EEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 194 CWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 194 ~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
+|+|+|++|++++.|+.|++||++.+
T Consensus 247 ~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 247 KWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EECCCCCEEEEEECCCEEEEEEccCC
Confidence 99999999999999999999999754
No 111
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-31 Score=217.58 Aligned_cols=202 Identities=9% Similarity=0.094 Sum_probs=149.3
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEE-----------------------------------------EEeccCceEEEE
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAV-----------------------------------------FKGHRKAVSYVK 41 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~-----------------------------------------~~~~~~~i~~~~ 41 (221)
+..+++++.||.|++|++. ++..... +.+|...+.+++
T Consensus 364 ~~~l~~~s~dg~l~~~~~~-~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~ 442 (902)
T 2oaj_A 364 PGLILLILGNGEIETMLYP-SGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKL 442 (902)
T ss_dssp CSEEEEEETTSCEEEEETT-TCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCC
T ss_pred ceeEEEEcCCCcEEEEECC-CCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCccc
Confidence 3478888899999999985 3322111 123334444555
Q ss_pred Eec-CCcEEEecCCCcEEEEEcCCCccc--eee---------eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCee
Q psy10662 42 FLN-KEDIVSASTDSQLKLWNINKPNCL--RSF---------VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH 109 (221)
Q Consensus 42 ~~~-~~~l~s~~~d~~v~~wd~~~~~~~--~~~---------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 109 (221)
|+| ++.|++|+.|++|++||+.++... ..+ .+|...|.+++|+|++++||+|+.||+|++||+.+++.
T Consensus 443 ~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~ 522 (902)
T 2oaj_A 443 PAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQF 522 (902)
T ss_dssp CCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC
T ss_pred ccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccc
Confidence 566 456999999999999999887432 111 16888999999999999999999999999999976632
Q ss_pred eEE----------EEee---c-------------------ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662 110 MHA----------YRFD---T-------------------VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157 (221)
Q Consensus 110 ~~~----------~~~~---~-------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 157 (221)
... +.+. . ...+++..+.+|...|++++|+|+| +||+|+.|+.|++|
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lw 601 (902)
T 2oaj_A 523 YSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLI 601 (902)
T ss_dssp ---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEE
T ss_pred cCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEE
Confidence 100 0000 0 0013456677899999999999999 99999999999999
Q ss_pred EcCCCCceeeeeeeccccccccccccc-ccccceeEEEEc-----CCC---cEEEEecCCCeEEEEEC
Q psy10662 158 YKGLSKHMHAYRFDTVRSMLERDRNED-DTNEFVSAVCWR-----QLS---RVLVAANSQGIIKIYVI 216 (221)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~-----~~~---~~l~~~~~dg~i~iw~~ 216 (221)
|+++...+.... ...+. +|...|++++|+ ||| ++|++|+.|++|++|++
T Consensus 602 d~~~~~~~~~~~----------~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 602 DRRGPAIIYMEN----------IREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp ETTTTEEEEEEE----------GGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred ECCCCeEEEEee----------hhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 987665432211 12333 789999999999 885 89999999999999999
No 112
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.98 E-value=2.1e-30 Score=209.35 Aligned_cols=201 Identities=17% Similarity=0.238 Sum_probs=169.3
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCC-ccceeeeccccce
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKP-NCLRSFVGHINDK 78 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~-~~~~~~~~~~~~v 78 (221)
|++++|++|+.||.|++||+. +++.+..+.+|.+.|++++|+|++ .|++++.||.|++||++++ .....+.+|...|
T Consensus 65 ~~~~~l~~~~~dg~i~vw~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v 143 (814)
T 3mkq_A 65 ARKNWIIVGSDDFRIRVFNYN-TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV 143 (814)
T ss_dssp GGGTEEEEEETTSEEEEEETT-TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCE
T ss_pred CCCCEEEEEeCCCeEEEEECC-CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcE
Confidence 678999999999999999998 778888999999999999999854 6999999999999999887 6667778899999
Q ss_pred eEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEE--------------------------------eecccceeEee
Q psy10662 79 NFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYR--------------------------------FDTVRSMLESS 125 (221)
Q Consensus 79 ~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------------------------~~~~~~~~~~~ 125 (221)
.+++|+| ++..+++++.||.|++||+.+++....+. |+.........
T Consensus 144 ~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 223 (814)
T 3mkq_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223 (814)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence 9999999 88899999999999999987665444332 34444555666
Q ss_pred EEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc--EEE
Q psy10662 126 FVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR--VLV 203 (221)
Q Consensus 126 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~ 203 (221)
+.+|...+.+++|+|+++++++++.||.|++||+.+++....+. .|...+.+++|+|+++ +++
T Consensus 224 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~~~~~ 288 (814)
T 3mkq_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN---------------VGLERSWCIATHPTGRKNYIA 288 (814)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEEC---------------CSSSSEEEEEECTTCGGGEEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee---------------cCCCcEEEEEEccCCCceEEE
Confidence 77888999999999999999999999999999998887665553 4667899999999987 355
Q ss_pred EecCCCeEEEEECCc
Q psy10662 204 AANSQGIIKIYVIPI 218 (221)
Q Consensus 204 ~~~~dg~i~iw~~~~ 218 (221)
++ .++.+.+|++..
T Consensus 289 ~~-~~~~~~~~~~~~ 302 (814)
T 3mkq_A 289 SG-FDNGFTVLSLGN 302 (814)
T ss_dssp EE-ETTEEEEEECSC
T ss_pred EE-eCCCEEEEEcCC
Confidence 54 567788898764
No 113
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=3.3e-31 Score=196.01 Aligned_cols=189 Identities=8% Similarity=0.029 Sum_probs=143.9
Q ss_pred EEeCCCeEEEEEecCCceeeEEEE--------eccCceEEEEEecCCc-EE--EecCCCcEEEEEcCCCccceeeecccc
Q psy10662 8 FGSADHCVHYYDLRNTKEALAVFK--------GHRKAVSYVKFLNKED-IV--SASTDSQLKLWNINKPNCLRSFVGHIN 76 (221)
Q Consensus 8 ~~~~dg~i~i~~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~-l~--s~~~d~~v~~wd~~~~~~~~~~~~~~~ 76 (221)
+|+.|+.+++|++......+.... .+...+.+++|+|++. ++ +++.|++|++||+++++++..+. |..
T Consensus 99 s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~ 177 (365)
T 4h5i_A 99 QGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRG 177 (365)
T ss_dssp HTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSS
T ss_pred EecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCC
Confidence 345678899999874433332222 2345689999998655 44 45579999999999999888875 778
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC----
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN---- 152 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---- 152 (221)
.|.+++|+|+|+++++++.++ +.+|+..+++.+... ....|...+.+++|+|+++++++++.|+
T Consensus 178 ~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARK-----------TDFDKNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp CCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEE-----------CCCCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred ceEEEEEccCCceEEecccee-EEEEEeccCcceeee-----------ecCCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 899999999999999998665 667777666654332 2345677899999999999999998887
Q ss_pred eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.+++|++......... ...+.+|...|++++|+|+|++|++|+.|+.|++||+++++
T Consensus 246 ~i~~~~~~~~~~~~~~-----------~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~ 302 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLR-----------SKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS 302 (365)
T ss_dssp EEEEEEEETTEEEEEE-----------EEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred EEeecccccceeccee-----------eeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc
Confidence 6788887655432111 11234678899999999999999999999999999998865
No 114
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=1.1e-30 Score=191.19 Aligned_cols=188 Identities=15% Similarity=0.223 Sum_probs=147.8
Q ss_pred EEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCC----ccceeeeccccceeEEEEeC--CCCEEEEecCCCeEE
Q psy10662 28 AVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKP----NCLRSFVGHINDKNFVGLAT--DGDYVACGSENNSLY 100 (221)
Q Consensus 28 ~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~ 100 (221)
..+.+|.+.|++++|+|+ ..|++++.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 456789999999999985 56999999999999999876 35566678999999999999 589999999999999
Q ss_pred EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC--CCEEEEecCCCeEEEEEcCCCCceeeeeee-------
Q psy10662 101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD--GDYVACGSENNSLYIYYKGLSKHMHAYRFD------- 171 (221)
Q Consensus 101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~------- 171 (221)
+||+++++... ..........+..|...+.+++|+|+ ++++++++.||.|++||+++.+.+..+...
T Consensus 85 vwd~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 85 LWEEDPDQEEC----SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp EEEECTTSCTT----SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred EEecCCCcccc----cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 99998764210 00011233445788999999999999 999999999999999999877654433211
Q ss_pred ----------------c----------------------ccccccccccccccccceeEEEEcCCC----cEEEEecCCC
Q psy10662 172 ----------------T----------------------VRSMLERDRNEDDTNEFVSAVCWRQLS----RVLVAANSQG 209 (221)
Q Consensus 172 ----------------~----------------------~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg 209 (221)
+ ..........+.+|...|.+++|+|++ ++|++++.||
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 0 001111234456788999999999998 8999999999
Q ss_pred eEEEEECCcc
Q psy10662 210 IIKIYVIPIR 219 (221)
Q Consensus 210 ~i~iw~~~~~ 219 (221)
.|++||+.++
T Consensus 241 ~i~iwd~~~~ 250 (351)
T 3f3f_A 241 RIRIFKITEK 250 (351)
T ss_dssp CEEEEEEEEC
T ss_pred eEEEEeCCCC
Confidence 9999999764
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=9.7e-31 Score=193.01 Aligned_cols=184 Identities=13% Similarity=0.168 Sum_probs=149.2
Q ss_pred CceeeEEEEeccCceEEEEEecC----CcEEEecCCCcEEEEEcCC-Cccc-eeeeccccceeEEEEeCCCCEEEEecCC
Q psy10662 23 TKEALAVFKGHRKAVSYVKFLNK----EDIVSASTDSQLKLWNINK-PNCL-RSFVGHINDKNFVGLATDGDYVACGSEN 96 (221)
Q Consensus 23 ~~~~~~~~~~~~~~i~~~~~~~~----~~l~s~~~d~~v~~wd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d 96 (221)
..+.+..+.+|.+.|++++|+|+ ..|++++.||.|++||+.+ +..+ ..+.+|...|.+++|+|++++|++++.|
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 45567778899999999999986 5699999999999999987 5444 6678899999999999999999999999
Q ss_pred CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEE--ecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecc-
Q psy10662 97 NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL--ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTV- 173 (221)
Q Consensus 97 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~- 173 (221)
|.|++||+++++.+. ...|...|.+++| +|++++|++++.||.|++||+++++.+..+.....
T Consensus 108 g~v~iwd~~~~~~~~--------------~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 173 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQ--------------IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERC 173 (368)
T ss_dssp SEEEEEETTTTEEEE--------------EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCE
T ss_pred CcEEEEEcCCCCcee--------------eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCc
Confidence 999999999887654 3578899999999 88999999999999999999988776544431100
Q ss_pred ---------------------------------------------------------------cc---cc--------cc
Q psy10662 174 ---------------------------------------------------------------RS---ML--------ER 179 (221)
Q Consensus 174 ---------------------------------------------------------------~~---~~--------~~ 179 (221)
.. .+ ..
T Consensus 174 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 174 YCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp EEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred eEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence 00 00 11
Q ss_pred ccccccccc------------ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 180 DRNEDDTNE------------FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 180 ~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
...+..|.. .|.+++|+|++++|++++.||.|++||+.+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART 306 (368)
T ss_dssp SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc
Confidence 112233443 69999999999999999999999999998764
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.1e-30 Score=196.65 Aligned_cols=182 Identities=14% Similarity=0.068 Sum_probs=148.2
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC-----ceEEEEEecC-CcEEEecCCCcEEEEEcCCCcc-------
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK-----AVSYVKFLNK-EDIVSASTDSQLKLWNINKPNC------- 67 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~------- 67 (221)
|||.+||+++.||.|++||.. . ++..+. |.. .|.+++|+|+ +.|++|+.||+|++||+.++..
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~--~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~ 170 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDN--K-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYF 170 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETT--E-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEE
T ss_pred CCCCEEEEEeCCCcEEEEeCC--c-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccccee
Confidence 799999999999999999965 2 566666 665 4999999984 5699999999999999988753
Q ss_pred ceee----eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeE-EEeeCceEEEEEecCC
Q psy10662 68 LRSF----VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSF-VGHINDKNFVGLATDG 142 (221)
Q Consensus 68 ~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~ 142 (221)
+..+ .+|.+.|.+++|+|+| +++++.|+.|++||+..++... ....+ .+|...|.+++|+ +
T Consensus 171 l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~----------~~~tL~~~h~~~V~svaFs--g 236 (588)
T 2j04_A 171 ESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP----------VSRMIQNASRRKITDLKIV--D 236 (588)
T ss_dssp EEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC----------CEEEEECCCSSCCCCEEEE--T
T ss_pred eeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc----------ceeeecccccCcEEEEEEE--C
Confidence 4555 5677899999999999 8888899999999998766310 01123 3677899999999 6
Q ss_pred CEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE--cCCCcEEEEecCCCeEEEEECC
Q psy10662 143 DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW--RQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
+.||+++ ++.|++||+..++..... .+|...|..+.| +|++..|++++.||+ ++|..+
T Consensus 237 ~~LASa~-~~tIkLWd~~~~~~~~~~---------------~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 237 YKVVLTC-PGYVHKIDLKNYSISSLK---------------TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp TEEEEEC-SSEEEEEETTTTEEEEEE---------------CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred CEEEEEe-CCeEEEEECCCCeEEEEE---------------cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 8888887 699999998876542111 168889999999 999999999999999 999874
No 117
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=1.5e-29 Score=190.55 Aligned_cols=191 Identities=17% Similarity=0.273 Sum_probs=156.4
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
+++||+|. |++|+|||.. +++....+. .|...|++++|+|+ .+|++|+.||.|++||+++++.+..+.+|...+.
T Consensus 116 ~n~lAvgl-d~tV~lWd~~-tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~ 193 (420)
T 4gga_A 116 GNVLAVAL-DNSVYLWSAS-SGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG 193 (420)
T ss_dssp TSEEEEEE-TTEEEEEETT-TCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCEEEEEe-CCEEEEEECC-CCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE
Confidence 45777774 9999999998 677666665 57778999999985 5689999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
++.++ +.++++++.|+.+++||....... +..+.+|...+..+.++|+++++++++.|+.+++|+.
T Consensus 194 ~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~------------~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 194 SLSWN--SYILSSGSRSGHIHHHDVRVAEHH------------VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp EEEEE--TTEEEEEETTSEEEEEETTSSSCE------------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEeeC--CCEEEEEeCCCceeEeeeccccee------------eEEecccccceeeeeecCCCCeeeeeeccccceEEee
Confidence 88775 579999999999999998765432 2346789999999999999999999999999999998
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCC-cEEEE--ecCCCeEEEEECCccc
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS-RVLVA--ANSQGIIKIYVIPIRV 220 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~--~~~dg~i~iw~~~~~~ 220 (221)
.+++.... .......|...|.+++|+|++ .++++ |+.|+.|++||+.+++
T Consensus 260 ~~~~~~~~-----------~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~ 312 (420)
T 4gga_A 260 APGEGGWV-----------PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 312 (420)
T ss_dssp SCCSSCSC-----------CSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE
T ss_pred ccccccce-----------eeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc
Confidence 77653211 112234678889999999965 45554 4579999999998865
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-30 Score=197.74 Aligned_cols=177 Identities=12% Similarity=0.115 Sum_probs=138.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF 80 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~ 80 (221)
|||+++|+++.|++|+ |.. ..+ .+.+|...|.+++|+|++ .++.+.+|+.+.. ....+ .|...|.+
T Consensus 25 pDG~~iASas~D~TV~--d~~-~~~---~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~~-~~~~~-~~~~~V~~ 90 (588)
T 2j04_A 25 RDGTLYLTTFPDISIG--QPK-YAK---DINCNSKNLFHVKEFPLE------FENKLDFELAQQN-GLLNS-QPVCYPRV 90 (588)
T ss_dssp TTSCEEEECSSSEEEE--EEC-CCS---CCSSBGGGTEEEEEECCC------CCCTTTTSCCCSS-CSSTT-SCSCCEEE
T ss_pred CCCCEEEEEcCCceee--ccc-ccc---eecCCCccEEEEEECCCC------CcceEEEEeCCCc-eEeec-CCCCcEEE
Confidence 7999999999999999 754 333 336899999999999977 5666666654322 23333 45788999
Q ss_pred EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC-----ceEEEEEecCCCEEEEecCCCeEE
Q psy10662 81 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN-----DKNFVGLATDGDYVACGSENNSLY 155 (221)
Q Consensus 81 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~ 155 (221)
++|+|+|.++|+++.||.|++||... .+. .+. |.. .+.+++|+|+|++|++|+.||.|+
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~-------------~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLT-------------NLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE--EEE-------------ECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc--eee-------------ecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 99999999999999999999999543 222 223 443 499999999999999999999999
Q ss_pred EEEcCCCCc-------eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 156 IYYKGLSKH-------MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 156 ~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+||+..+.. +..+. ....+|..+|.+++|+|+| +++++.|+.|++|++.+++
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~-----------~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIR-----------LSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEE-----------CSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS
T ss_pred EEECCCCccccccceeeeeee-----------cccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc
Confidence 999987643 12221 0113678899999999999 7888889999999998764
No 119
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=2e-29 Score=184.52 Aligned_cols=175 Identities=13% Similarity=0.123 Sum_probs=148.0
Q ss_pred CceEEEEeCCCeEEEEEecCC---------ceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-Ccc--cee
Q psy10662 3 SCHLAFGSADHCVHYYDLRNT---------KEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-PNC--LRS 70 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-~~~--~~~ 70 (221)
+++|++++.|+.|++||+. . .+++..+. |...|.+++|+|+. +++++.|+.|++||+++ +.. ...
T Consensus 112 ~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~ 188 (342)
T 1yfq_A 112 DDKLIAASWDGLIEVIDPR-NYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIE 188 (342)
T ss_dssp TTEEEEEETTSEEEEECHH-HHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEE
T ss_pred CCEEEEEcCCCeEEEEccc-ccccccccccCCeeeEEe-eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceee
Confidence 6789999999999999998 4 55555666 88999999999877 99999999999999988 543 223
Q ss_pred eeccccceeEEEEeC-CCCEEEEecCCCeEEEEECCCC------eeeEEEEeecccceeEeeEEEe---------eCceE
Q psy10662 71 FVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLS------KHMHAYRFDTVRSMLESSFVGH---------INDKN 134 (221)
Q Consensus 71 ~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~v~ 134 (221)
...|...+.+++|+| +++++++++.||.|++|+++.. +.... +..| ...|.
T Consensus 189 ~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~i~ 255 (342)
T 1yfq_A 189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA-------------FRCHRLNLKDTNLAYPVN 255 (342)
T ss_dssp ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE-------------EECCCCCTTCCSSCCCEE
T ss_pred ecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee-------------eecccccccccccceeEE
Confidence 456788999999999 9999999999999999999876 44433 3444 34899
Q ss_pred EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccc-ccceeEEEEcCCCcEEEEecCCCe
Q psy10662 135 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT-NEFVSAVCWRQLSRVLVAANSQGI 210 (221)
Q Consensus 135 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~ 210 (221)
+++|+|++++|++++.||.|++||+.+++.+..+. .| ...|.+++ |++++|++++.||.
T Consensus 256 ~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---------------~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 256 SIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA---------------KFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC---------------CCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred EEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh---------------cccCCCceEec--CCCCeEEEEecCCc
Confidence 99999999999999999999999998887655442 56 88899999 99999999999998
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.3e-28 Score=183.95 Aligned_cols=203 Identities=13% Similarity=0.068 Sum_probs=142.7
Q ss_pred ceEEEEeCCCeEEEEEecCCc---------eeeEEEEeccCceEEEEEec---------------------CCcEEEecC
Q psy10662 4 CHLAFGSADHCVHYYDLRNTK---------EALAVFKGHRKAVSYVKFLN---------------------KEDIVSAST 53 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~---------~~~~~~~~~~~~i~~~~~~~---------------------~~~l~s~~~ 53 (221)
..|++++.++.|.+|+..... ..+..+ .+..++..+.|++ ...+++++.
T Consensus 31 ~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~~ 109 (393)
T 4gq1_A 31 SNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTI-QTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACVCQ 109 (393)
T ss_dssp TTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEE-ECSSCEEEEEECTTCEEECC----------CCEEEEEEEEEET
T ss_pred CCEEEEECCCCEEEEECCCCCcccccccceeeeEEE-ecCCCeeeEeecCCccccccccCCCcceeecCCCCCEEEEEeC
Confidence 344555568889999875221 112222 2445555555542 234889999
Q ss_pred CCcEEEEEcCCCccc-----eeeeccccceeEEEEeC--------CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccc
Q psy10662 54 DSQLKLWNINKPNCL-----RSFVGHINDKNFVGLAT--------DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRS 120 (221)
Q Consensus 54 d~~v~~wd~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 120 (221)
|++|++||+++++.. ..+.+|.+.|++++|+| ++++|++++.|++|+|||++++.++..
T Consensus 110 d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~-------- 181 (393)
T 4gq1_A 110 DNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA-------- 181 (393)
T ss_dssp TSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE--------
T ss_pred CCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee--------
Confidence 999999999887543 34578999999999998 788999999999999999987766544
Q ss_pred eeEeeEEEeeCceEEEEEecCCC-EEEEecCCCeEEEEEcCCCCceeeeeeec----------ccccccccccccccccc
Q psy10662 121 MLESSFVGHINDKNFVGLATDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDT----------VRSMLERDRNEDDTNEF 189 (221)
Q Consensus 121 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 189 (221)
+..|...+.+++|+|++. +|++++.|+.|++||+++++......... ............+|...
T Consensus 182 -----~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 182 -----GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp -----EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred -----ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 367889999999999874 89999999999999998876544332111 01111112223467888
Q ss_pred eeEEEEc-CCCcEEEEecCCCeEEEEECCccc
Q psy10662 190 VSAVCWR-QLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 190 v~~~~~~-~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+.++.|+ |+++.|++++.|+.+++||+.+++
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 9999987 799999999999999999997654
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=5.4e-27 Score=174.76 Aligned_cols=200 Identities=10% Similarity=0.063 Sum_probs=156.2
Q ss_pred CCCceE-EEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-E-EEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 1 MNSCHL-AFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-I-VSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 1 ~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
|++++| ++++.|+.|++||+. +++.+..+..+. .+.+++|+|++. + ++++.++.|++||+.+++.+..+.. ...
T Consensus 41 ~dg~~l~~~~~~d~~i~v~d~~-~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~ 117 (391)
T 1l0q_A 41 PDGTKVYVANAHSNDVSIIDTA-TNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKS 117 (391)
T ss_dssp TTSSEEEEEEGGGTEEEEEETT-TTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSS
T ss_pred CCCCEEEEECCCCCeEEEEECC-CCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCC
Confidence 577766 677799999999998 778888887554 899999998554 5 4556789999999999988877764 456
Q ss_pred eeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEE-----------------------------eecccceeEeeEE
Q psy10662 78 KNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRSMLESSFV 127 (221)
Q Consensus 78 v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~ 127 (221)
+.+++|+|+++++ ++++.++.|++||+.+++.+..+. |+.........+
T Consensus 118 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~- 196 (391)
T 1l0q_A 118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV- 196 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE-
Confidence 8999999999977 788889999999999888766554 222222222222
Q ss_pred EeeCceEEEEEecCCCEEEEec---CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-E
Q psy10662 128 GHINDKNFVGLATDGDYVACGS---ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-V 203 (221)
Q Consensus 128 ~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~ 203 (221)
.+...+.+++|+|+++++++++ .++.|++||+.+++.+..+. .+ ..+.+++|+|++++| +
T Consensus 197 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~---------------~~-~~~~~~~~s~dg~~l~~ 260 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP---------------VG-PDPAGIAVTPDGKKVYV 260 (391)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE---------------CC-SSEEEEEECTTSSEEEE
T ss_pred ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe---------------cC-CCccEEEEccCCCEEEE
Confidence 3455788999999999998888 68999999998887655543 22 246889999999877 6
Q ss_pred EecCCCeEEEEECCccc
Q psy10662 204 AANSQGIIKIYVIPIRV 220 (221)
Q Consensus 204 ~~~~dg~i~iw~~~~~~ 220 (221)
+++.|+.|++||+.+++
T Consensus 261 s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 261 ALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EETTTTEEEEEETTTTE
T ss_pred EcCCCCEEEEEECCCCc
Confidence 67889999999998765
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.1e-27 Score=177.04 Aligned_cols=185 Identities=9% Similarity=0.040 Sum_probs=151.7
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-E-EEecCCCcEEEEEcCCCccceeeeccccceeE
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-I-VSASTDSQLKLWNINKPNCLRSFVGHINDKNF 80 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~ 80 (221)
+.++++++.|+.|++||+. +++.+..+..|. .+.+++|+|++. + ++++.|+.|++||+.+++.+..+..+. .+.+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~-~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~ 78 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVT-SNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQG 78 (391)
T ss_dssp EEEEEEETTTTEEEEEETT-TTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEE
T ss_pred CEEEEEcCCCCEEEEEECC-CCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccc
Confidence 4678899999999999998 778888888664 589999998654 4 677799999999999999888876544 8999
Q ss_pred EEEeCCCCEEE-EecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EEecCCCeEEEEE
Q psy10662 81 VGLATDGDYVA-CGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYY 158 (221)
Q Consensus 81 ~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d 158 (221)
++|+|++++++ +++.++.|++||+.+++.+..+ .+...+.+++|+|+++.+ ++++.++.|++||
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~--------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 144 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV--------------KTGKSPLGLALSPDGKKLYVTNNGDKTVSVIN 144 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE--------------ECSSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE--------------eCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 99999999775 5557799999999998876553 234568899999999977 6888899999999
Q ss_pred cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-EEecCCCeEEEEECCccc
Q psy10662 159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-VAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~ 220 (221)
+.+++....+. ....+..++|+|++++| ++++.|+.|++||+.+++
T Consensus 145 ~~~~~~~~~~~----------------~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 145 TVTKAVINTVS----------------VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (391)
T ss_dssp TTTTEEEEEEE----------------CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCcEEEEEe----------------cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence 98887665543 12346899999999887 577789999999998764
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=5.5e-27 Score=176.94 Aligned_cols=199 Identities=15% Similarity=0.124 Sum_probs=158.6
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cE-EEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DI-VSASTDSQLKLWNINKPNCLRSFVGHINDK 78 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v 78 (221)
|++.++++++.|+.|++||+. +++.+..+..|...+.+++|+|++ .+ ++++.|+.|++||+++++.+..+.. ...+
T Consensus 179 ~~~~~~~s~~~d~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~ 256 (433)
T 3bws_A 179 EHNELWVSQMQANAVHVFDLK-TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLP 256 (433)
T ss_dssp GGTEEEEEEGGGTEEEEEETT-TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEE
T ss_pred CCCEEEEEECCCCEEEEEECC-CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCc
Confidence 468899999999999999998 677788888899999999999855 45 4566899999999999888777754 4458
Q ss_pred eEEEEeCCCCEEEEec--------CCCeEEEEECCCCeeeEEEE-----------------------------eecccce
Q psy10662 79 NFVGLATDGDYVACGS--------ENNSLYIYYKGLSKHMHAYR-----------------------------FDTVRSM 121 (221)
Q Consensus 79 ~~~~~~~~~~~l~~~~--------~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~~~~ 121 (221)
.+++|+|+++++++++ .|+.|++||+.+++.+..+. |+.....
T Consensus 257 ~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 257 RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 9999999999988887 58899999999887665442 2223333
Q ss_pred eEeeEEEeeCceEEEEEecCCCEEEEecC---------------CCeEEEEEcCCCCceeeeeeeccccccccccccccc
Q psy10662 122 LESSFVGHINDKNFVGLATDGDYVACGSE---------------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT 186 (221)
Q Consensus 122 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (221)
....+ .+...+.+++|+|+++++++++. ||.|++||+.+++.+..+. .
T Consensus 337 ~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~----------------~ 399 (433)
T 3bws_A 337 VQKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE----------------A 399 (433)
T ss_dssp EEEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE----------------C
T ss_pred EEEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec----------------C
Confidence 33333 35667889999999998888776 5799999998887665553 2
Q ss_pred ccceeEEEEcCCCcEEEEecC-CCeEEEEECCc
Q psy10662 187 NEFVSAVCWRQLSRVLVAANS-QGIIKIYVIPI 218 (221)
Q Consensus 187 ~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~ 218 (221)
...+.+++|+|+|++|++++. |+.|++|++..
T Consensus 400 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 400 GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 345889999999999988764 99999999863
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.4e-27 Score=180.22 Aligned_cols=189 Identities=11% Similarity=0.034 Sum_probs=154.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeE-----EEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeecc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALA-----VFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVGH 74 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~-----~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~ 74 (221)
|++.++++++.++.|++||+. +++... .+.+|...|.+++|+|++ .+++++.|+.|++||+++++.+..+..|
T Consensus 132 ~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~ 210 (433)
T 3bws_A 132 DNTRLAIPLLEDEGMDVLDIN-SGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLT 210 (433)
T ss_dssp SSSEEEEEBTTSSSEEEEETT-TCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS
T ss_pred CCCeEEEEeCCCCeEEEEECC-CCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCC
Confidence 467788888889999999998 566555 334678899999998754 5788899999999999999988888888
Q ss_pred ccceeEEEEeCCCCEE-EEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec----
Q psy10662 75 INDKNFVGLATDGDYV-ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS---- 149 (221)
Q Consensus 75 ~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---- 149 (221)
...+.+++|+|+++++ ++++.++.|++||+++++.+..+ . ....+.+++|+|+++++++++
T Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~-------------~-~~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 211 GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT-------------D-KIGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC-------------C-CCSEEEEEEECTTSSEEEEEEEESC
T ss_pred CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe-------------c-CCCCceEEEEcCCCCEEEEEECCCC
Confidence 8899999999999987 45558999999999988776543 1 234588999999999999888
Q ss_pred ----CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-EEecCCCeEEEEECCccc
Q psy10662 150 ----ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-VAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 150 ----~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~ 220 (221)
.|+.|++||+.+++....+ .+...+..++|+|+++.+ ++++.|+.|++||+.+++
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~~----------------~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDTI----------------GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEEE----------------EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred ccccCCCeEEEEECCCCcEEeec----------------cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 5889999999887655443 234467899999999755 666889999999998764
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=8.4e-27 Score=167.15 Aligned_cols=192 Identities=8% Similarity=0.009 Sum_probs=136.5
Q ss_pred eEEEEeCCCeEEEEEecCCc---eeeEEEEeccCc-------------------------eEEEEEecC----Cc-EEEe
Q psy10662 5 HLAFGSADHCVHYYDLRNTK---EALAVFKGHRKA-------------------------VSYVKFLNK----ED-IVSA 51 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~---~~~~~~~~~~~~-------------------------i~~~~~~~~----~~-l~s~ 51 (221)
.+++++ ...|++|+.. .. +.+++++.|+.+ |.+++|+|+ +. ++++
T Consensus 56 ~~~~~~-~~~v~lw~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~ 133 (356)
T 2w18_A 56 CIITAC-EDVVSLWKAL-DAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKS 133 (356)
T ss_dssp EEEEEE-SSEEEEEEES-SSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEE
T ss_pred EEEEec-cceEEEcccC-CCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeC
Confidence 455665 4589999998 45 778888877754 445555554 22 4443
Q ss_pred c--------------------CCCcEEEEEcC-CCccceeeeccccceeEEEEeC---CCCEEEEecCCCeEEEEECCCC
Q psy10662 52 S--------------------TDSQLKLWNIN-KPNCLRSFVGHINDKNFVGLAT---DGDYVACGSENNSLYIYYKGLS 107 (221)
Q Consensus 52 ~--------------------~d~~v~~wd~~-~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~ 107 (221)
+ .|+.|++|++. +++.+..+..|...+..++|+| ++.+|++++.|++|+|||+.++
T Consensus 134 g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG 213 (356)
T 2w18_A 134 GNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTG 213 (356)
T ss_dssp EEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTC
T ss_pred CCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCC
Confidence 3 38889999984 4777777788888899999998 6789999999999999999999
Q ss_pred eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE------------EEecCCCeEEEEEcCCCCceeeeeeecccc
Q psy10662 108 KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV------------ACGSENNSLYIYYKGLSKHMHAYRFDTVRS 175 (221)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l------------~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 175 (221)
+.++++.- -..+...+.+++|+|+|+++ ++|+.|++|++||..+++.+..+.+..
T Consensus 214 k~l~tL~g----------~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~--- 280 (356)
T 2w18_A 214 QLLKKMHI----------DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL--- 280 (356)
T ss_dssp CEEEEEEC----------CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC---
T ss_pred cEEEEEcC----------CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec---
Confidence 98887610 01123467788999999876 567889999999999887765443211
Q ss_pred cccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 176 MLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
..+|...+.+.++ ++.++++++.|++|++||+.+++
T Consensus 281 -------p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk 316 (356)
T 2w18_A 281 -------PPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQ 316 (356)
T ss_dssp -------CTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCS
T ss_pred -------cCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCc
Confidence 1244444444444 48899999999999999999876
No 126
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=1.3e-25 Score=162.66 Aligned_cols=172 Identities=16% Similarity=0.222 Sum_probs=136.4
Q ss_pred eEEEEEecCCcEEEecCCCcEEEEEcCCCccceeee--ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEE
Q psy10662 37 VSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFV--GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR 114 (221)
Q Consensus 37 i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 114 (221)
..+|+|++++.|++ +.|++|++||+.+++.+..+. +|...|.+++|+|+++++++|+.|+.|++||+++++.+..+.
T Consensus 28 ~~~l~WS~~~~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 28 LNLVDWSSGNVLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp CBCEEECTTSEEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceEEEECCCCEEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 57899998875555 569999999999999887664 567789999999999999999999999999999999887765
Q ss_pred ee----------------------------cccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCcee
Q psy10662 115 FD----------------------------TVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH 166 (221)
Q Consensus 115 ~~----------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 166 (221)
.. .........+.+|...+..+.++++++++++++.|+.|++||+++++...
T Consensus 107 ~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 186 (318)
T 4ggc_A 107 SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW 186 (318)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBS
T ss_pred CccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccc
Confidence 11 11223445667888999999999999999999999999999998765432
Q ss_pred eeeeecccccccccccccccccceeEEEEcCCCcEE---EEecCCCeEEEEECCccc
Q psy10662 167 AYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL---VAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~dg~i~iw~~~~~~ 220 (221)
.. ......+...|..++++|++..+ ++++.++.|++|+.....
T Consensus 187 ~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~ 232 (318)
T 4ggc_A 187 VP-----------LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 232 (318)
T ss_dssp CC-----------SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC
T ss_pred cc-----------eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc
Confidence 21 11223567789999999976533 466789999999987653
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.95 E-value=5.6e-26 Score=171.42 Aligned_cols=195 Identities=11% Similarity=0.075 Sum_probs=143.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCC----------ce-----eeEEEEeccCceEEEEEecC-CcEE----EecCCCcEEEE
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNT----------KE-----ALAVFKGHRKAVSYVKFLNK-EDIV----SASTDSQLKLW 60 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~----------~~-----~~~~~~~~~~~i~~~~~~~~-~~l~----s~~~d~~v~~w 60 (221)
+++.++++++.++ +++|+.... .. ....+ .+...|.+++|+|+ ..|+ +++.|+.|++|
T Consensus 46 ~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iw 123 (434)
T 2oit_A 46 NKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFF 123 (434)
T ss_dssp TTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEE
T ss_pred cCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEE
Confidence 3567888888887 888876411 00 01112 25678999999985 4577 78889999999
Q ss_pred EcCCC--------cc---ceeeeccccceeEEEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEE
Q psy10662 61 NINKP--------NC---LRSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG 128 (221)
Q Consensus 61 d~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (221)
|+++. +. +..+.+|...|.+++|+|+ +.++++++.||.|++||+++++.+.. ..+
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~-------------~~~ 190 (434)
T 2oit_A 124 DVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCA-------------TLP 190 (434)
T ss_dssp EHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEE-------------EEC
T ss_pred EccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceee-------------ccC
Confidence 98765 22 3445678999999999998 78999999999999999988754432 245
Q ss_pred eeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-C
Q psy10662 129 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-S 207 (221)
Q Consensus 129 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 207 (221)
|...+.+++|+|+|++|++|+.||.|++||.+ ++....+.... .....|...|.+++|++++.++++.+ .
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~--------~~~~~~~~~v~~v~w~~~~~~l~~~~~~ 261 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPP--------FYESDHPVRVLDVLWIGTYVFAIVYAAA 261 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCT--------TCCTTSCEEEEEEEEEETTEEEEEEEET
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCc--------ccCCCCceeEEEEEEecCceEEEEEccC
Confidence 77899999999999999999999999999987 44333322100 00113455899999999988886543 4
Q ss_pred CC------eEEEEECCcc
Q psy10662 208 QG------IIKIYVIPIR 219 (221)
Q Consensus 208 dg------~i~iw~~~~~ 219 (221)
|| .+++|+++..
T Consensus 262 dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 262 DGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TCCSSSCCEEEEEECCCT
T ss_pred CCccCCCCceEEEEeccC
Confidence 43 3899999754
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=7.2e-25 Score=164.68 Aligned_cols=185 Identities=10% Similarity=0.022 Sum_probs=143.2
Q ss_pred CceEEEEeCC------CeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCC---cEEEEEcCCCccceeee
Q psy10662 3 SCHLAFGSAD------HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDS---QLKLWNINKPNCLRSFV 72 (221)
Q Consensus 3 ~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~---~v~~wd~~~~~~~~~~~ 72 (221)
+..++.++.+ +.|++||+. . .....+..|...+.+++|+|++ .|++++.++ .|++||+++++.. .+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-G-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-S-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-C-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 5566666654 799999997 3 4467778899999999999865 588888775 9999999988765 456
Q ss_pred ccccceeEEEEeCCCCEEE-EecCCC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662 73 GHINDKNFVGLATDGDYVA-CGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS 149 (221)
Q Consensus 73 ~~~~~v~~~~~~~~~~~l~-~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 149 (221)
.|...+.+++|+|+|++|+ +++.++ .|.+||+.+++.. .+..+...+.+++|+|+|++|+.++
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~--------------~l~~~~~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR--------------QVTDGRSNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--------------ECCCCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE--------------eCcCCCCcccceEECCCCCEEEEEE
Confidence 6788899999999999877 666555 4999999877642 2345667889999999999988877
Q ss_pred C-CC--eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC---CeEEEEECCccc
Q psy10662 150 E-NN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ---GIIKIYVIPIRV 220 (221)
Q Consensus 150 ~-d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~ 220 (221)
. ++ .|++||+.+++... + ..+...+..++|+|+|++|++++.+ ..|++||+.+++
T Consensus 286 ~~~g~~~i~~~d~~~~~~~~-l---------------~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 286 DQAGRPQVYKVNINGGAPQR-I---------------TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp CTTSSCEEEEEETTSSCCEE-C---------------CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred CCCCCcEEEEEECCCCCEEE-E---------------ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 6 44 67777887664321 1 1244568899999999999988764 689999998765
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1.8e-24 Score=162.58 Aligned_cols=186 Identities=11% Similarity=0.083 Sum_probs=144.4
Q ss_pred CCCceEEEEeCCC---eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EE-EecCCCc--EEEEEcCCCccceeeec
Q psy10662 1 MNSCHLAFGSADH---CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IV-SASTDSQ--LKLWNINKPNCLRSFVG 73 (221)
Q Consensus 1 ~~~~~l~~~~~dg---~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~-s~~~d~~--v~~wd~~~~~~~~~~~~ 73 (221)
|||+.|++++.++ .|++||+. +++.. .+..|...+.+++|+|++. |+ +++.++. |++||+.+++. ..+..
T Consensus 188 pdg~~la~~s~~~~~~~i~~~d~~-tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~ 264 (415)
T 2hqs_A 188 PDGSKLAYVTFESGRSALVIQTLA-NGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTD 264 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETT-TCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCC
T ss_pred CCCCEEEEEEecCCCcEEEEEECC-CCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcC
Confidence 7899999999885 99999998 55543 5667888999999998665 55 6666655 99999988765 45667
Q ss_pred cccceeEEEEeCCCCEEEEecC-CC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662 74 HINDKNFVGLATDGDYVACGSE-NN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE 150 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 150 (221)
|...+.+++|+|+|++|++++. ++ .|.+||+.+++... +..+...+..++|+|+|++|+.++.
T Consensus 265 ~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~--------------l~~~~~~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 265 GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR--------------ITWEGSQNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE--------------CCCSSSEEEEEEECTTSSEEEEEEE
T ss_pred CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE--------------EecCCCcccCeEECCCCCEEEEEEC
Confidence 8888999999999998887775 44 67788887765321 2334557788999999999988876
Q ss_pred C---CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC---eEEEEECCccc
Q psy10662 151 N---NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG---IIKIYVIPIRV 220 (221)
Q Consensus 151 d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~ 220 (221)
+ ..|++||+.+++... + ..+. .+.+++|+|+|++|++++.++ .|++|++.++.
T Consensus 331 ~~g~~~i~~~d~~~~~~~~-l---------------~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 331 NGGQQHIAKQDLATGGVQV-L---------------SSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp CSSCEEEEEEETTTCCEEE-C---------------CCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred cCCceEEEEEECCCCCEEE-e---------------cCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc
Confidence 4 589999998765421 1 1232 688999999999999988776 89999987653
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=3.4e-23 Score=160.23 Aligned_cols=201 Identities=9% Similarity=0.079 Sum_probs=152.9
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEc--CCCccceeeeccccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNI--NKPNCLRSFVGHIND 77 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~--~~~~~~~~~~~~~~~ 77 (221)
|++.++++++.|+.|.+||.. +++++.++..+.. +..++|+|+ ++|++++.|+.|++||+ .+++.+..+. +...
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~-t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~ 223 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGD-SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIE 223 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETT-TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSE
T ss_pred CCCEEEEEEcCCCeEEEEECC-CceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCC
Confidence 467889999999999999998 7888888884333 899999985 56889999999999999 7888888776 4456
Q ss_pred eeEEEEeC----CCCEEEEecC-CCeEEEEECCCCeeeEEEEeecccceeEeeEEEee-CceEEEEEecCCC-EEEEecC
Q psy10662 78 KNFVGLAT----DGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHI-NDKNFVGLATDGD-YVACGSE 150 (221)
Q Consensus 78 v~~~~~~~----~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~-~l~~~~~ 150 (221)
+..++|+| +|+++++++. ++.|.+||..+++++..+...... ......|. ..+..+.++|++. ++++...
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~---~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT---VDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC---SSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcc---cCccccccCCceEEEEECCCCCEEEEEECC
Confidence 79999999 9999988874 899999999999988776311000 00000122 3688999999765 5667778
Q ss_pred CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCcccC
Q psy10662 151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPIRVL 221 (221)
Q Consensus 151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~l 221 (221)
++.|.+||+.+.+.+..... .+...+..+.|+|+|++|+++ ..++.|.+||+.++++
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i--------------~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSI--------------GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEE--------------ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred CCeEEEEEecCCCcceeEEe--------------ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE
Confidence 89999999987664431111 123456789999999987655 4689999999998763
No 131
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=5.8e-22 Score=144.51 Aligned_cols=198 Identities=9% Similarity=-0.041 Sum_probs=146.4
Q ss_pred CCCceE-EEEeCCCeEEEEEecCCceeeEEEEe-c----cCceEEEEEecCC-cEEEec------------CCCcEEEEE
Q psy10662 1 MNSCHL-AFGSADHCVHYYDLRNTKEALAVFKG-H----RKAVSYVKFLNKE-DIVSAS------------TDSQLKLWN 61 (221)
Q Consensus 1 ~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~-~----~~~i~~~~~~~~~-~l~s~~------------~d~~v~~wd 61 (221)
||++.+ +++..++.|.+||+. +++.+..+.. + ...+..++|+|++ .++++. .++.|.+||
T Consensus 43 ~dg~~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d 121 (337)
T 1pby_B 43 PGGRIAYATVNKSESLVKIDLV-TGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121 (337)
T ss_dssp TTSSEEEEEETTTTEEEEEETT-TCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred CCCCEEEEEeCCCCeEEEEECC-CCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEE
Confidence 577655 556667899999997 6666666653 1 2267789999865 566664 579999999
Q ss_pred cCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeec------------------------
Q psy10662 62 INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDT------------------------ 117 (221)
Q Consensus 62 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~------------------------ 117 (221)
+.+++.+..+.. ...+.+++|+|++++++++ ++.|.+||+.+++....+....
T Consensus 122 ~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 198 (337)
T 1pby_B 122 AETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVM 198 (337)
T ss_dssp TTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEE
T ss_pred CCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCce
Confidence 998887776653 4567889999999988777 5789999999888776553211
Q ss_pred ----------------------------cccee-EeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeee
Q psy10662 118 ----------------------------VRSML-ESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAY 168 (221)
Q Consensus 118 ----------------------------~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 168 (221)
..... ...+..+...+..++|+|++++++++ ++.|.+||+.+++.+..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 199 ATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV 276 (337)
T ss_dssp EEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEE
T ss_pred eeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCccee
Confidence 11100 11122334456789999999999888 789999999887765544
Q ss_pred eeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 169 RFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
. ....+.+++|+|+|++|++++.++.|.+||+.+++
T Consensus 277 ~----------------~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 277 P----------------LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp E----------------CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred c----------------CCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 3 12346789999999999999999999999998765
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=1.2e-21 Score=142.78 Aligned_cols=191 Identities=8% Similarity=-0.019 Sum_probs=140.7
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecC-CCcEEEEEcCCCcc-ceeeecccccee
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAST-DSQLKLWNINKPNC-LRSFVGHINDKN 79 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~-d~~v~~wd~~~~~~-~~~~~~~~~~v~ 79 (221)
+..+++++.++.|.+||+. +++....+..+...+ .++|+|++. +++++. ++.|.+||+.+++. ...+..+..+..
T Consensus 10 ~~~~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTD-TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMA 87 (331)
T ss_dssp CEEEEEEGGGTEEEEEETT-TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCC
T ss_pred CEEEEEecCCCeEEEEeCc-ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCcc
Confidence 4457888889999999998 677777777666667 999998654 555544 89999999999887 666666666665
Q ss_pred EEEEeCCCCEEEEecCCC---eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCe-E
Q psy10662 80 FVGLATDGDYVACGSENN---SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNS-L 154 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i 154 (221)
+++|+|++++++++..++ .|.+||+.+++.+..+ .....+..++|+|+|++++++ ..++. |
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~--------------~~~~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTI--------------PIPYDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEE--------------ECCTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEE--------------ECCCCccceEECCCCCEEEEEecCCCceE
Confidence 599999999988665553 8999999988876553 223456899999999865554 55578 9
Q ss_pred EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE-ecCCCeEEEEECCccc
Q psy10662 155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA-ANSQGIIKIYVIPIRV 220 (221)
Q Consensus 155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iw~~~~~~ 220 (221)
.+|++.....+...... . . .....+..++|+|+|++|+. +..++.|.+||+.+++
T Consensus 154 ~~~~~~~~g~~~~~~~~----~---~----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQE----F---I----SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp EEEEECTTCCEEEEEEE----E---E----CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT
T ss_pred EEEEECCCCcEeecCCc----c---c----cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 99998865433222100 0 0 12334688999999996655 4568999999998765
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1.9e-22 Score=152.22 Aligned_cols=156 Identities=10% Similarity=0.068 Sum_probs=118.5
Q ss_pred CCCceEE----EEeCCCeEEEEEecCC-----c--ee---eEEEEeccCceEEEEEecC--CcEEEecCCCcEEEEEcCC
Q psy10662 1 MNSCHLA----FGSADHCVHYYDLRNT-----K--EA---LAVFKGHRKAVSYVKFLNK--EDIVSASTDSQLKLWNINK 64 (221)
Q Consensus 1 ~~~~~l~----~~~~dg~i~i~~~~~~-----~--~~---~~~~~~~~~~i~~~~~~~~--~~l~s~~~d~~v~~wd~~~ 64 (221)
|++++|+ +|+.|+.|+|||+.+. . ++ +..+.+|...|.+++|+|+ ..|++++.||+|++||+++
T Consensus 102 pdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~ 181 (434)
T 2oit_A 102 CDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE 181 (434)
T ss_dssp TTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS
T ss_pred CCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC
Confidence 6788999 7889999999998732 0 22 3455679999999999984 4588999999999999999
Q ss_pred CccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE
Q psy10662 65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY 144 (221)
Q Consensus 65 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 144 (221)
+..+....+|...|.+++|+|+|++|++|+.||.|++||++ ++....+...... ...|...+.+++|++++.+
T Consensus 182 ~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~------~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 182 TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY------ESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTC------CTTSCEEEEEEEEEETTEE
T ss_pred CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCccc------CCCCceeEEEEEEecCceE
Confidence 87766667788999999999999999999999999999998 4444333110000 0012347899999998887
Q ss_pred EEEec-CCC------eEEEEEcCCCC
Q psy10662 145 VACGS-ENN------SLYIYYKGLSK 163 (221)
Q Consensus 145 l~~~~-~d~------~i~~~d~~~~~ 163 (221)
+++.+ .+| .+++|+++..+
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEccCCCccCCCCceEEEEeccCC
Confidence 75433 332 38999998654
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=1.1e-21 Score=144.06 Aligned_cols=194 Identities=10% Similarity=0.016 Sum_probs=148.9
Q ss_pred CCCceEEEEeC-------CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc--EEEecCCCcEEEEEcCCCccceee
Q psy10662 1 MNSCHLAFGSA-------DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED--IVSASTDSQLKLWNINKPNCLRSF 71 (221)
Q Consensus 1 ~~~~~l~~~~~-------dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--l~s~~~d~~v~~wd~~~~~~~~~~ 71 (221)
|+++++++++. ++.|.+||.. +++.+..+.. ...+..++|+|++. +++...++.|.+||..+++.+..+
T Consensus 50 ~dg~~l~~~~~~~~~~~~~~~v~~~d~~-~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 127 (353)
T 3vgz_A 50 QQENALWLATSQSRKLDKGGVVYRLDPV-TLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRL 127 (353)
T ss_dssp TTTTEEEEEECCCTTTEESEEEEEECTT-TCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEcCCCcCCCCCccEEEEcCC-CCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEE
Confidence 57777777764 5689999998 6777777764 45578899998554 445566899999999999887777
Q ss_pred ecccc---------ceeEEEEeCCCCEEEEec--CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662 72 VGHIN---------DKNFVGLATDGDYVACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT 140 (221)
Q Consensus 72 ~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 140 (221)
..+.. .+.+++|+|+++++++++ .++.|.+||+.+++.+..+ ..+...+..++|+|
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~-------------~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 128 VLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI-------------QNTGKMSTGLALDS 194 (353)
T ss_dssp ESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE-------------CCCCTTCCCCEEET
T ss_pred ecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe-------------cCCCCccceEEECC
Confidence 54432 268899999999776665 5789999999988876554 22344577899999
Q ss_pred CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEECCcc
Q psy10662 141 DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVIPIR 219 (221)
Q Consensus 141 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~ 219 (221)
+++++++++.++.|.+||+.+++....+.... .++...+..++|+|+|++|++++. ++.|.+||+.++
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLD-----------DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCC-----------SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCC-----------CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 99999999999999999999887766554211 123446788999999997777664 599999999876
Q ss_pred c
Q psy10662 220 V 220 (221)
Q Consensus 220 ~ 220 (221)
+
T Consensus 264 ~ 264 (353)
T 3vgz_A 264 N 264 (353)
T ss_dssp C
T ss_pred c
Confidence 5
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=2.1e-21 Score=141.48 Aligned_cols=193 Identities=8% Similarity=0.081 Sum_probs=138.7
Q ss_pred CCCceEEEEeC-CCeEEEEEecCCcee-eEEEEeccCceEEEEEecCCc-EEEecCCC---cEEEEEcCCCccceeeecc
Q psy10662 1 MNSCHLAFGSA-DHCVHYYDLRNTKEA-LAVFKGHRKAVSYVKFLNKED-IVSASTDS---QLKLWNINKPNCLRSFVGH 74 (221)
Q Consensus 1 ~~~~~l~~~~~-dg~i~i~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~---~v~~wd~~~~~~~~~~~~~ 74 (221)
||++++++++. ++.|.+||+. +++. ...+..+..+..+++|+|++. ++++..++ .|.+||+.+++.+..+..
T Consensus 49 ~dg~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~- 126 (331)
T 3u4y_A 49 SDCSNVVVTSDFCQTLVQIETQ-LEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI- 126 (331)
T ss_dssp SSSCEEEEEESTTCEEEEEECS-SSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-
T ss_pred CCCCEEEEEeCCCCeEEEEECC-CCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-
Confidence 67886666555 8899999998 5555 667776776666699998655 66444442 899999999988777654
Q ss_pred ccceeEEEEeCCCCEEE-EecCCCe-EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEE-EecCC
Q psy10662 75 INDKNFVGLATDGDYVA-CGSENNS-LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVA-CGSEN 151 (221)
Q Consensus 75 ~~~v~~~~~~~~~~~l~-~~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d 151 (221)
.....+++|+|++++++ +...++. |.+|++.....+.... .........+..++|+|+|++++ ++..+
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 197 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG---------QEFISGGTRPFNITFTPDGNFAFVANLIG 197 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE---------EEEECSSSSEEEEEECTTSSEEEEEETTT
T ss_pred CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC---------CccccCCCCccceEECCCCCEEEEEeCCC
Confidence 34568999999998654 4455577 9999987644332210 01112334578899999999654 45568
Q ss_pred CeEEEEEcCCCCc---eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662 152 NSLYIYYKGLSKH---MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV 220 (221)
Q Consensus 152 ~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~ 220 (221)
+.|.+||+.+++. +..+. ....+..++|+|+|++|+.++ .++.|.+||+.+++
T Consensus 198 ~~v~v~d~~~~~~~~~~~~~~----------------~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 198 NSIGILETQNPENITLLNAVG----------------TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGT 254 (331)
T ss_dssp TEEEEEECSSTTSCEEEEEEE----------------CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTE
T ss_pred CeEEEEECCCCcccceeeecc----------------CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCc
Confidence 9999999988776 43332 224567899999999776655 58899999998765
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=2.5e-21 Score=142.18 Aligned_cols=193 Identities=8% Similarity=-0.032 Sum_probs=146.4
Q ss_pred CCCceE-EEEeCCCeEEEEEecCCceeeEEEEeccCc---------eEEEEEecCC-cEEEec--CCCcEEEEEcCCCcc
Q psy10662 1 MNSCHL-AFGSADHCVHYYDLRNTKEALAVFKGHRKA---------VSYVKFLNKE-DIVSAS--TDSQLKLWNINKPNC 67 (221)
Q Consensus 1 ~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~---------i~~~~~~~~~-~l~s~~--~d~~v~~wd~~~~~~ 67 (221)
||++++ ++...++.|.+||.. +++.+..+..+... +.+++|+|++ .+++++ .++.|.+||..+++.
T Consensus 98 ~dg~~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 98 NTTQTLWFGNTVNSAVTAIDAK-TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL 176 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETT-TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE
T ss_pred CCCCEEEEEecCCCEEEEEeCC-CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce
Confidence 577744 455557999999998 67777777654422 7889999854 455554 588999999999988
Q ss_pred ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662 68 LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC 147 (221)
Q Consensus 68 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 147 (221)
+..+..+...+..++|+|+++++++++.++.|.+||+.+++....+... ..++...+..++|+|+++++++
T Consensus 177 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~---------~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 177 KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLL---------DDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECC---------CSSSCCCEEEEEEETTTTEEEE
T ss_pred EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcC---------CCCCCcccceEEECCCCCEEEE
Confidence 8877655566889999999999999999999999999998887665211 0123446778999999997766
Q ss_pred ecC-CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662 148 GSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV 220 (221)
Q Consensus 148 ~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~ 220 (221)
++. ++.|.+||..+++....+.. +. ...++|+|+|++++.++ .++.|.+||+.+++
T Consensus 248 ~~~~~~~v~~~d~~~~~~~~~~~~--------------~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 248 TDSKAAEVLVVDTRNGNILAKVAA--------------PE---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp EESSSSEEEEEETTTCCEEEEEEC--------------SS---CCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred EeCCCCEEEEEECCCCcEEEEEEc--------------CC---CceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 665 59999999988877665541 11 14689999999665554 69999999998765
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=1.7e-22 Score=144.61 Aligned_cols=187 Identities=10% Similarity=0.044 Sum_probs=134.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCC-ceeeEEEEec-cCceEEEEEecCC-cEEEec--CCCcEEEEEc--CCCccceeeec
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNT-KEALAVFKGH-RKAVSYVKFLNKE-DIVSAS--TDSQLKLWNI--NKPNCLRSFVG 73 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~-~~~~~~~~~~-~~~i~~~~~~~~~-~l~s~~--~d~~v~~wd~--~~~~~~~~~~~ 73 (221)
||+++|++++ ++.|++||+. + ++.......+ ...+.+++|+|++ .|++++ .++...+|.+ .+++ ...+..
T Consensus 51 pdg~~l~~~~-~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 127 (297)
T 2ojh_A 51 PDGKYLLLNS-EGLLYRLSLA-GDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK 127 (297)
T ss_dssp TTSSEEEEEE-TTEEEEEESS-SCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS
T ss_pred CCCCEEEEEc-CCeEEEEeCC-CCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec
Confidence 6899999986 7899999998 5 5555555444 3678999999865 477766 3345555554 4444 334433
Q ss_pred cccceeEEEEeCCCCEEE-EecCCCeEEEEECC--CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-
Q psy10662 74 HINDKNFVGLATDGDYVA-CGSENNSLYIYYKG--LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS- 149 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 149 (221)
+ ..+..++|+|++++++ +++.++.+.+|++. +++. ..+..+...+.+++|+|++++|+.++
T Consensus 128 ~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 128 N-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE--------------TRLTHGEGRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp S-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE--------------EECCCSSSCEEEEEECTTSSEEEEEEC
T ss_pred C-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc--------------eEcccCCCccccceECCCCCEEEEEec
Confidence 3 3488899999999876 77789999999853 2222 12345567789999999999887665
Q ss_pred CCCeEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----------CeEEEEECC
Q psy10662 150 ENNSLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-----------GIIKIYVIP 217 (221)
Q Consensus 150 ~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------g~i~iw~~~ 217 (221)
.++.+.+|++.. ......+ ..+...+..++|+|+|++|++++.+ +.|.+||+.
T Consensus 193 ~~~~~~i~~~~~~~~~~~~~---------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 193 RTGQMQIWRVRVDGSSVERI---------------TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp TTSSCEEEEEETTSSCEEEC---------------CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred CCCCccEEEECCCCCCcEEE---------------ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 588999998752 2222211 2455678899999999999988765 579999998
Q ss_pred ccc
Q psy10662 218 IRV 220 (221)
Q Consensus 218 ~~~ 220 (221)
+++
T Consensus 258 ~~~ 260 (297)
T 2ojh_A 258 GGN 260 (297)
T ss_dssp SCS
T ss_pred CCC
Confidence 765
No 138
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=2.4e-21 Score=141.99 Aligned_cols=201 Identities=8% Similarity=-0.048 Sum_probs=144.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEecc-CceEEEEEecCCc-E-EEecCCCcEEEEEcCCCccceeeecc---
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHR-KAVSYVKFLNKED-I-VSASTDSQLKLWNINKPNCLRSFVGH--- 74 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~-l-~s~~~d~~v~~wd~~~~~~~~~~~~~--- 74 (221)
+++.++++++.++.|++||+. +++.+..+..+. ..+..++|+|++. + ++...++.|.+||+.+++.+..+...
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~ 87 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVA-SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP 87 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETT-TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST
T ss_pred CCCEEEEEeCCCCeEEEEECC-CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc
Confidence 367889999999999999998 677777776443 2578999998654 4 45667899999999988877666432
Q ss_pred ---ccceeEEEEeCCCCEEEEecCC------------CeEEEEECCCCe---eeEEEE----------------------
Q psy10662 75 ---INDKNFVGLATDGDYVACGSEN------------NSLYIYYKGLSK---HMHAYR---------------------- 114 (221)
Q Consensus 75 ---~~~v~~~~~~~~~~~l~~~~~d------------~~v~iwd~~~~~---~~~~~~---------------------- 114 (221)
...+..++|+|+++++++++.+ +.|.+||+.+++ .+..+.
T Consensus 88 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~~~ 167 (349)
T 1jmx_B 88 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPD 167 (349)
T ss_dssp TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSS
T ss_pred ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEccCc
Confidence 2237889999999999888765 899999987632 222211
Q ss_pred ---eecccceeEeeEEEe--------------------------------------------------------------
Q psy10662 115 ---FDTVRSMLESSFVGH-------------------------------------------------------------- 129 (221)
Q Consensus 115 ---~~~~~~~~~~~~~~~-------------------------------------------------------------- 129 (221)
++.........+...
T Consensus 168 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (349)
T 1jmx_B 168 IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT 247 (349)
T ss_dssp EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE
T ss_pred EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEe
Confidence 111122222211111
Q ss_pred ------eCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE
Q psy10662 130 ------INDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL 202 (221)
Q Consensus 130 ------~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 202 (221)
...+..++|+| ++++++++ ++.|.+||+.+++....+. ....+.+++|+|+|++|
T Consensus 248 ~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~----------------~~~~~~~~~~s~dg~~l 309 (349)
T 1jmx_B 248 QEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN----------------LDHTYYCVAFDKKGDKL 309 (349)
T ss_dssp EEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE----------------CSSCCCEEEECSSSSCE
T ss_pred cccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc----------------CCCCccceEECCCCCEE
Confidence 01344667789 99998888 8899999998877655543 12246789999999999
Q ss_pred EEecCCCeEEEEECCccc
Q psy10662 203 VAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 203 ~~~~~dg~i~iw~~~~~~ 220 (221)
++++.++.|.+||+.+++
T Consensus 310 ~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 310 YLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EEESBSSEEEEEETTTTE
T ss_pred EEecCCCeEEEEeccccc
Confidence 988889999999998765
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=4.5e-21 Score=148.42 Aligned_cols=209 Identities=9% Similarity=-0.002 Sum_probs=140.6
Q ss_pred CCCceEEEEeCCCeEEEEEe--cCCceeeEEEEeccCceEEEEEec----CCc-EEEec-CCCcEEEEEcCCCccceeee
Q psy10662 1 MNSCHLAFGSADHCVHYYDL--RNTKEALAVFKGHRKAVSYVKFLN----KED-IVSAS-TDSQLKLWNINKPNCLRSFV 72 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~--~~~~~~~~~~~~~~~~i~~~~~~~----~~~-l~s~~-~d~~v~~wd~~~~~~~~~~~ 72 (221)
|||++|++++.|+.|++||+ . +.+.+..+. +...+..++|+| ++. +++++ .+++|.+||..+++++..+.
T Consensus 188 pdg~~l~v~~~d~~V~v~D~~~~-t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 188 ASGRYLLVIGRDARIDMIDLWAK-EPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp TTSCEEEEEETTSEEEEEETTSS-SCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEECCCCeEEEEECcCC-CCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 78999999999999999999 5 677788887 456789999998 654 66666 48999999999988877664
Q ss_pred c----------ccc-ceeEEEEeCCCCE-EEEecCCCeEEEEECCCCeeeE--EEE------------------------
Q psy10662 73 G----------HIN-DKNFVGLATDGDY-VACGSENNSLYIYYKGLSKHMH--AYR------------------------ 114 (221)
Q Consensus 73 ~----------~~~-~v~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~--~~~------------------------ 114 (221)
. |.. .+..+.++|++.. +++...++.|.+||+.+.+.+. .+.
T Consensus 266 ~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~ 345 (543)
T 1nir_A 266 TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNS 345 (543)
T ss_dssp CCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGG
T ss_pred ccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCC
Confidence 3 222 5677777776553 4556667777777776543322 110
Q ss_pred -----eecccceeEeeEEE----eeCceEEEEEecC-CCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662 115 -----FDTVRSMLESSFVG----HINDKNFVGLATD-GDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE 183 (221)
Q Consensus 115 -----~~~~~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (221)
++....+++..+.. |......+ ++|+ +.+++++. .|+.|.+||+.+.... ...+..+..+
T Consensus 346 ~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~--------~~~~~~v~~l 416 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP--------QYAWKKVAEL 416 (543)
T ss_dssp TEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT--------TTBTSEEEEE
T ss_pred CeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc--------hhcCeEEEEE
Confidence 22233333333332 33322222 4676 56666665 5799999999872110 0011122233
Q ss_pred cccccceeEEEEcCCCcEEEEec-------CCCeEEEEECCccc
Q psy10662 184 DDTNEFVSAVCWRQLSRVLVAAN-------SQGIIKIYVIPIRV 220 (221)
Q Consensus 184 ~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i~iw~~~~~~ 220 (221)
..|...+..++|+|++++|++++ .++.|.+||+.+++
T Consensus 417 ~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 417 QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred EcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCC
Confidence 35666778899999999999987 27799999999765
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=2.6e-21 Score=141.06 Aligned_cols=198 Identities=9% Similarity=-0.021 Sum_probs=144.0
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEEEeccC--ceEEEEEecCC-cE-EEecCCCcEEEEEcCCCccceeeec-c----
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRK--AVSYVKFLNKE-DI-VSASTDSQLKLWNINKPNCLRSFVG-H---- 74 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~-~l-~s~~~d~~v~~wd~~~~~~~~~~~~-~---- 74 (221)
++|++++.++.|.+||+. +++.+..+..... .+..++|+|++ .+ +++..++.|.+||+.+++.+..+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTE-KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETT-TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECC-CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 578999999999999998 6777777763322 58899999865 44 5666789999999999888766642 1
Q ss_pred ccceeEEEEeCCCCEEEEec------------CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662 75 INDKNFVGLATDGDYVACGS------------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG 142 (221)
Q Consensus 75 ~~~v~~~~~~~~~~~l~~~~------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 142 (221)
...+..++|+|++++++++. .++.|.+||+.+++.+..+ . ....+..++|+|++
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-------------~-~~~~~~~~~~s~dg 146 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF-------------E-APRQITMLAWARDG 146 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE-------------E-CCSSCCCEEECTTS
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE-------------e-CCCCcceeEECCCC
Confidence 22678899999999888875 5799999999988776543 1 23456788999999
Q ss_pred CEEEEecCCCeEEEEEcCCCCceeeeeeec---------cccccc---------------------------------c-
Q psy10662 143 DYVACGSENNSLYIYYKGLSKHMHAYRFDT---------VRSMLE---------------------------------R- 179 (221)
Q Consensus 143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---------~~~~~~---------------------------------~- 179 (221)
++++++ ++.|++||+.+++....+.... .+..+. .
T Consensus 147 ~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 224 (337)
T 1pby_B 147 SKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM 224 (337)
T ss_dssp SCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEE
T ss_pred CEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEE
Confidence 988877 6889999998877654443211 000000 0
Q ss_pred --------cccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 180 --------DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 180 --------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
......+...+.+++|+|+|++|+++ ++.|.+||+.+++
T Consensus 225 d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~ 271 (337)
T 1pby_B 225 DLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA 271 (337)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE
T ss_pred eCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc
Confidence 00011223346679999999999988 7999999998764
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=6.1e-23 Score=164.06 Aligned_cols=203 Identities=12% Similarity=0.113 Sum_probs=140.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC---ceEEEEEecCCc-EEEecCC---------CcEEEEEcCCCcc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK---AVSYVKFLNKED-IVSASTD---------SQLKLWNINKPNC 67 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~-l~s~~~d---------~~v~~wd~~~~~~ 67 (221)
|||+++++ +.||.|++||+. +++....+..|.. .|.+++|+|++. |++++.+ +.+.+||+.+++.
T Consensus 26 pdg~~~~~-~~dg~i~~~d~~-~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 26 SDTEFIYR-EQKGTVRLWNVE-TNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP 103 (723)
T ss_dssp SSSCBCCC-CSSSCEEEBCGG-GCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred CCCcEEEE-eCCCCEEEEECC-CCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce
Confidence 68887776 689999999998 6666666666654 499999998655 7777654 7788999998876
Q ss_pred ceee---eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC---------ceEE
Q psy10662 68 LRSF---VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN---------DKNF 135 (221)
Q Consensus 68 ~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~ 135 (221)
..+ ..|...+..++|+|+|+.|+.++. +.|.+||+.+++......... ... .+.++.. .+..
T Consensus 104 -~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~-~~~---~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 104 -QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK-EGV---IYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp -EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB-TTT---EEEEECCHHHHHTTSSSSEE
T ss_pred -EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC-CCc---eECcccceeEEEEeccCcce
Confidence 233 234445889999999999998876 789999998877654321100 000 0111111 2378
Q ss_pred EEEecCCCEEEEecCCC----------------------------------eEEEEEcCCCCceeeeeeecccccccccc
Q psy10662 136 VGLATDGDYVACGSENN----------------------------------SLYIYYKGLSKHMHAYRFDTVRSMLERDR 181 (221)
Q Consensus 136 ~~~~~~~~~l~~~~~d~----------------------------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 181 (221)
++|+|||+.|+.++.++ .|++||+.+++....+.. ..
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~---------~~ 248 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP---------PD 248 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC---------CC
T ss_pred EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeC---------Cc
Confidence 99999999999887543 677777766553222210 00
Q ss_pred cccccccceeEEEEcCCCcEEEEecC----CCeEEEEECCccc
Q psy10662 182 NEDDTNEFVSAVCWRQLSRVLVAANS----QGIIKIYVIPIRV 220 (221)
Q Consensus 182 ~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iw~~~~~~ 220 (221)
....+...+..++|+|||++|++.+. +..|++||+.+++
T Consensus 249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV 291 (723)
T ss_dssp CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc
Confidence 11124567899999999999877643 4689999998765
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=2.2e-21 Score=141.83 Aligned_cols=189 Identities=6% Similarity=0.043 Sum_probs=130.2
Q ss_pred eEEEEeCCCeEEEEEecCCc--eeeEEEEeccCceEEEEEecCCc-EEEecCC-CcEEEEEcC--CCc--cceeeecccc
Q psy10662 5 HLAFGSADHCVHYYDLRNTK--EALAVFKGHRKAVSYVKFLNKED-IVSASTD-SQLKLWNIN--KPN--CLRSFVGHIN 76 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d-~~v~~wd~~--~~~--~~~~~~~~~~ 76 (221)
++++++.++.|++|++...+ +.+..+ .+...+.+++|+|++. |++++.+ +.|.+|++. +++ .+..+..+ .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~ 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-G 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-S
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-C
Confidence 44454789999999996333 333343 4778899999998654 7777765 999999997 444 33344333 3
Q ss_pred ceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeE
Q psy10662 77 DKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSL 154 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i 154 (221)
.+..++|+|+++++++++ .++.|.+||+..+...... ..+ .....+.+++|+|+++++++++ .++.|
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~----------~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v 153 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV----------DVV-EGLDGCHSANISPDNRTLWVPALKQDRI 153 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE----------EEE-CCCTTBCCCEECTTSSEEEEEEGGGTEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccc----------ccc-cCCCCceEEEECCCCCEEEEecCCCCEE
Confidence 789999999999776555 5889999998433221111 111 2234578899999999888777 89999
Q ss_pred EEEEcCC-CCceeee--eeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662 155 YIYYKGL-SKHMHAY--RFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI 218 (221)
Q Consensus 155 ~~~d~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~ 218 (221)
.+||+.+ ++..... .... .....+..++|+|++++|+++ ..++.|.+|++..
T Consensus 154 ~~~d~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 154 CLFTVSDDGHLVAQDPAEVTT------------VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp EEEEECTTSCEEEEEEEEEEC------------STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred EEEEecCCCceeeeccccccc------------CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 9999987 4332211 1100 123457789999999977655 4799999999953
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=1.9e-22 Score=161.72 Aligned_cols=198 Identities=10% Similarity=0.114 Sum_probs=142.3
Q ss_pred CCCceEEEEeC-CC-----eEEEEEecCCceeeEEEEeccC------------------------ceEEEEEecCCc-EE
Q psy10662 1 MNSCHLAFGSA-DH-----CVHYYDLRNTKEALAVFKGHRK------------------------AVSYVKFLNKED-IV 49 (221)
Q Consensus 1 ~~~~~l~~~~~-dg-----~i~i~~~~~~~~~~~~~~~~~~------------------------~i~~~~~~~~~~-l~ 49 (221)
|||++|++++. |+ .|++||+. +++....+..+.. .+.+++|+|++. |+
T Consensus 46 pdG~~la~~~~~d~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~ 124 (741)
T 2ecf_A 46 PDGSRVTFLRGKDSDRNQLDLWSYDIG-SGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLL 124 (741)
T ss_dssp TTSSEEEEEECCSSCTTEEEEEEEETT-TCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEE
T ss_pred cCCCEEEEEeccCCCCcccEEEEEECC-CCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEE
Confidence 79999999998 88 89999998 5666555554433 378999998765 56
Q ss_pred EecCCCcEEEEEcCCCc--cceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662 50 SASTDSQLKLWNINKPN--CLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFV 127 (221)
Q Consensus 50 s~~~d~~v~~wd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 127 (221)
+++. +.|++||+.+++ ....+..+...+..++|+|+|++|+.++. +.|.+||+.+++....... ..... ..
T Consensus 125 ~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~--~~~~~---~~ 197 (741)
T 2ecf_A 125 FPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTAD--GSTTI---GN 197 (741)
T ss_dssp EEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCC--CCSSE---EE
T ss_pred EEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccC--Cccce---ec
Confidence 5554 999999998873 44456667788999999999999988874 5899999988766432100 00000 00
Q ss_pred Ee--------eCceEEEEEecCCCEEEEecCCC---------------------------------eEEEEEcCC-CCce
Q psy10662 128 GH--------INDKNFVGLATDGDYVACGSENN---------------------------------SLYIYYKGL-SKHM 165 (221)
Q Consensus 128 ~~--------~~~v~~~~~~~~~~~l~~~~~d~---------------------------------~i~~~d~~~-~~~~ 165 (221)
+. ...+..++|+|||++|++++.|+ .|.+||+.+ ++..
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~ 277 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQ 277 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCE
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceE
Confidence 00 11246799999999999987765 778888776 5432
Q ss_pred eeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC-----CCeEEEEECCccc
Q psy10662 166 HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-----QGIIKIYVIPIRV 220 (221)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~ 220 (221)
.... ...|...+..++| |||++|+.++. +..|++||+.+++
T Consensus 278 ~~~~-------------~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 278 WIDL-------------GKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp EECC-------------CSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred EecC-------------CCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 2110 0136678899999 99999987653 6789999998764
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=9e-20 Score=133.83 Aligned_cols=206 Identities=12% Similarity=0.156 Sum_probs=131.6
Q ss_pred CCCceEEEEeC---CCeEEEEEecCCce--eeEEEEeccCceEEEEEecCCc-EEEec-CCCcEEEEEcCC-C--cccee
Q psy10662 1 MNSCHLAFGSA---DHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNKED-IVSAS-TDSQLKLWNINK-P--NCLRS 70 (221)
Q Consensus 1 ~~~~~l~~~~~---dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~-l~s~~-~d~~v~~wd~~~-~--~~~~~ 70 (221)
|||+ |++++. ++.|++|++. .++ .+..+..+...+..++|+|++. |++++ .++.+.+|++.. + +.+..
T Consensus 49 pdg~-l~~~~~~~~~~~v~~~~~~-~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~ 126 (347)
T 3hfq_A 49 AKDC-LYSVDKEDDEGGIAAWQID-GQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDT 126 (347)
T ss_dssp TTCE-EEEEEEETTEEEEEEEEEE-TTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEE
T ss_pred cCCe-EEEEEecCCCceEEEEEec-CCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecce
Confidence 6788 554444 6899999997 443 4445556778899999998654 66666 689999999963 2 22222
Q ss_pred eec---------cccceeEEEEeCCCCEEEEecCCCeEEEEECC-CCeeeEE-------------EEeeccccee-----
Q psy10662 71 FVG---------HINDKNFVGLATDGDYVACGSENNSLYIYYKG-LSKHMHA-------------YRFDTVRSML----- 122 (221)
Q Consensus 71 ~~~---------~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~~~~-------------~~~~~~~~~~----- 122 (221)
+.. ....+.+++|+|+++++++...++.|.+||+. .++.... +.+.+.....
T Consensus 127 ~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 206 (347)
T 3hfq_A 127 VQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE 206 (347)
T ss_dssp EECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred eecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC
Confidence 211 11247889999999977777778999999998 4432211 1121111100
Q ss_pred -------------------EeeEEEee------CceEEEEEecCCCEEE-EecCCCeEEEEEcCCCCceeeeeeeccccc
Q psy10662 123 -------------------ESSFVGHI------NDKNFVGLATDGDYVA-CGSENNSLYIYYKGLSKHMHAYRFDTVRSM 176 (221)
Q Consensus 123 -------------------~~~~~~~~------~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 176 (221)
...+.... ..+..++|+|+|++|+ +...++.|.+|++........+.
T Consensus 207 ~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~------- 279 (347)
T 3hfq_A 207 LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQ------- 279 (347)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEE-------
T ss_pred CCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeE-------
Confidence 00011011 2366799999999774 55568999999986432211111
Q ss_pred ccccccccccccceeEEEEcCCCcEEEEecC-CCeEEEEEC--Cccc
Q psy10662 177 LERDRNEDDTNEFVSAVCWRQLSRVLVAANS-QGIIKIYVI--PIRV 220 (221)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~--~~~~ 220 (221)
....+...+..++|+|+|++|++++. ++.|.+|++ .+++
T Consensus 280 -----~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 280 -----QISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp -----EEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred -----EEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 11123445789999999998888775 589999954 4554
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=2.1e-20 Score=136.52 Aligned_cols=199 Identities=8% Similarity=0.087 Sum_probs=132.9
Q ss_pred CCCceEEEEeCC-CeEEEEEecC-Cc--eeeEEEEeccCceEEEEEecCCc-EEEec-CCCcEEEEEcC---CCccceee
Q psy10662 1 MNSCHLAFGSAD-HCVHYYDLRN-TK--EALAVFKGHRKAVSYVKFLNKED-IVSAS-TDSQLKLWNIN---KPNCLRSF 71 (221)
Q Consensus 1 ~~~~~l~~~~~d-g~i~i~~~~~-~~--~~~~~~~~~~~~i~~~~~~~~~~-l~s~~-~d~~v~~wd~~---~~~~~~~~ 71 (221)
|++++|++++.+ +.|.+|++.. ++ +.+..+..+ ..+..++|+|++. +++++ .++.|.+||+. ..+.+..+
T Consensus 47 pdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 125 (343)
T 1ri6_A 47 PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV 125 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc
Confidence 688888888876 9999999962 12 334455543 3789999998654 55544 58899999994 33444444
Q ss_pred eccccceeEEEEeCCCCEEEEec-CCCeEEEEECCC-CeeeEEEEeecccceeEeeEEE-eeCceEEEEEecCCCEEEEe
Q psy10662 72 VGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGL-SKHMHAYRFDTVRSMLESSFVG-HINDKNFVGLATDGDYVACG 148 (221)
Q Consensus 72 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 148 (221)
.. ...+.+++|+|+++++++++ .++.|.+||+.+ ++...... ..... ....+..++|+|++++++++
T Consensus 126 ~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~pdg~~l~~~ 195 (343)
T 1ri6_A 126 EG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP---------AEVTTVEGAGPRHMVFHPNEQYAYCV 195 (343)
T ss_dssp CC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE---------EEEECSTTCCEEEEEECTTSSEEEEE
T ss_pred cC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc---------cccccCCCCCcceEEECCCCCEEEEE
Confidence 43 34588999999999877776 889999999987 44322110 00111 22367789999999976554
Q ss_pred -cCCCeEEEEEcCC--CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEE-EecCCCeEEEEECC
Q psy10662 149 -SENNSLYIYYKGL--SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV-AANSQGIIKIYVIP 217 (221)
Q Consensus 149 -~~d~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~ 217 (221)
..++.|.+|++.. +.......... ..........+..++|+|+|++|+ +...++.|.+|++.
T Consensus 196 ~~~~~~i~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 196 NELNSSVDVWELKDPHGNIECVQTLDM-------MPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp ETTTTEEEEEESSCTTSCCEEEEEEEC-------SCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eCCCCEEEEEEecCCCCcEEEEeeccc-------cCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 5889999999964 32211111110 000001233567899999998877 45579999999997
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=6.6e-21 Score=136.26 Aligned_cols=179 Identities=15% Similarity=0.173 Sum_probs=128.1
Q ss_pred EEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-Cccceeeecc-ccceeEEEEeC
Q psy10662 8 FGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-PNCLRSFVGH-INDKNFVGLAT 85 (221)
Q Consensus 8 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-~~~~~~~~~~-~~~v~~~~~~~ 85 (221)
.++.++.|++||+. +++.. .+..|...|.+++|+|++..+..+.++.|++||+.+ ++.......+ ...+.+++|+|
T Consensus 17 ~~~~~~~i~~~d~~-~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIR-TRKMR-VVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETT-TTEEE-EEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCC-CCcee-eeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 34578899999998 55544 455689999999999876644444589999999998 7776655555 36789999999
Q ss_pred CCCEEEEec--CCCeEEEE--ECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEE-EecCCCeEEEEEcC
Q psy10662 86 DGDYVACGS--ENNSLYIY--YKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVA-CGSENNSLYIYYKG 160 (221)
Q Consensus 86 ~~~~l~~~~--~d~~v~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~ 160 (221)
+++++++++ .++...+| ++.+++. .. +. ....+..++|+|+++.|+ +++.++.+.+|+++
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~-------------~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTP-RL-------------MT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCC-EE-------------CC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCce-EE-------------ee-cCCCccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 999999888 33444454 5444332 11 11 223478899999999877 78889999999864
Q ss_pred CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECC
Q psy10662 161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIP 217 (221)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~ 217 (221)
...... ..+..+...+.+++|+|+|++|+.++ .++.+++|++.
T Consensus 160 ~~~~~~--------------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 160 IDSGVE--------------TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp TTTCCE--------------EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCCcc--------------eEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 322110 01124556789999999999887766 58999999875
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=2.8e-21 Score=154.92 Aligned_cols=191 Identities=10% Similarity=0.010 Sum_probs=138.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCCce--eeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeeeccccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~ 77 (221)
|||++|++++. +.|++||+. ++. ....+..|...+..++|+|++. |+.++ ++.|++||+.+++.......+...
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~-~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~ 194 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLK-QEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTT 194 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESS-SCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSS
T ss_pred CCCCEEEEEeC-CcEEEEECC-CCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccc
Confidence 78999999886 899999998 441 3445666888899999999766 55554 679999999887765544333322
Q ss_pred ----------------eeEEEEeCCCCEEEEecCCC---------------------------------eEEEEECCC-C
Q psy10662 78 ----------------KNFVGLATDGDYVACGSENN---------------------------------SLYIYYKGL-S 107 (221)
Q Consensus 78 ----------------v~~~~~~~~~~~l~~~~~d~---------------------------------~v~iwd~~~-~ 107 (221)
+..++|+|||++|++++.|+ .|.+||+.+ +
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 274 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA 274 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC
Confidence 47899999999998887665 778888877 6
Q ss_pred eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-----CCeEEEEEcCCCCceeeeeeeccccccccccc
Q psy10662 108 KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-----NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRN 182 (221)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 182 (221)
+..... ....+...+..++| |||+.|++++. +..|++||+.+++....+.....
T Consensus 275 ~~~~~~-----------~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~--------- 333 (741)
T 2ecf_A 275 QTQWID-----------LGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP--------- 333 (741)
T ss_dssp CCEEEC-----------CCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS---------
T ss_pred ceEEec-----------CCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC---------
Confidence 543221 00135567889999 99999987653 57899999988876544431110
Q ss_pred ccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 183 EDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 183 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
..-..+..++|+|||+++++++.||.+++|.++
T Consensus 334 --~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 334 --TWVPLHNSLRFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp --SCCCCCSCCEECTTSCEEEEECTTSSCEEEEEC
T ss_pred --CcCCcCCceEECCCCeEEEEecCCCccEEEEEc
Confidence 000134678999999999999999988888765
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=1.1e-20 Score=147.78 Aligned_cols=184 Identities=11% Similarity=0.022 Sum_probs=130.1
Q ss_pred CCCceEEEEeC-CCeEEEEEecCCceeeEEEEecc-CceEEEEEecCCcEEEecC---CCcEEEEEcCC--Cccceeeec
Q psy10662 1 MNSCHLAFGSA-DHCVHYYDLRNTKEALAVFKGHR-KAVSYVKFLNKEDIVSAST---DSQLKLWNINK--PNCLRSFVG 73 (221)
Q Consensus 1 ~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~l~s~~~---d~~v~~wd~~~--~~~~~~~~~ 73 (221)
|||+.||+++. ||+++||++. +++..+ +..|. ..+..++|+|+..+++++. +....+|.+.. ......+..
T Consensus 31 ~DG~~la~~s~~~g~~~lw~~~-~g~~~~-lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~ 108 (582)
T 3o4h_A 31 VDGDKLLVVGFSEGSVNAYLYD-GGETVK-LNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA 108 (582)
T ss_dssp ETTTEEEEEEEETTEEEEEEEE-TTEEEE-CCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCEECTT
T ss_pred CCCCeEEEEEccCCceeEEEEc-CCCcEe-eecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccccccC
Confidence 68999999887 9999999996 555444 44455 6899999999855555554 45566665543 222223322
Q ss_pred cccceeEEEEeCCCC--EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662 74 HINDKNFVGLATDGD--YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN 151 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~--~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 151 (221)
. ..+...+|+|+++ .+++++.++ +.+||+.+++.... ..+.. .+++|+|||++|+.++.+
T Consensus 109 ~-~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l--------------~~~~~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 109 V-KPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGLREL--------------ARLPG--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp S-CSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEE--------------EEESS--CEEEEEEETTEEEEEEEE
T ss_pred C-CCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEe--------------ecCCC--ceEEECCCCCEEEEEEEc
Confidence 2 2344668888886 344444454 55999988765432 22222 789999999999988777
Q ss_pred ----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC--eEEEEECCccc
Q psy10662 152 ----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG--IIKIYVIPIRV 220 (221)
Q Consensus 152 ----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~ 220 (221)
+.|++||+.+++.. .+ ..|...+..++|+|||++|+++..++ .|++||+.+++
T Consensus 171 ~~~~~~i~~~d~~~g~~~-~l---------------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLR-VF---------------DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp ETTEEEEEEEETTTCCCE-EE---------------CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred CCCCeEEEEEcCCCCCce-Ee---------------ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 78999998877643 11 24666789999999999999888888 89999998765
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=1.3e-20 Score=150.41 Aligned_cols=196 Identities=13% Similarity=0.102 Sum_probs=133.1
Q ss_pred CceEEEEeCCCeEEEEEecCCceee-EEEEecc-----------------CceEEEEEecCCcEEEecCCCcEEEEEcCC
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEAL-AVFKGHR-----------------KAVSYVKFLNKEDIVSASTDSQLKLWNINK 64 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~-~~~~~~~-----------------~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~ 64 (221)
++.+++++.++ | +||+. +++.+ ..+..+. ..|.+++|+|++.++.+ .++.+++||+.+
T Consensus 35 g~~~~~~~~~~-i-~~d~~-tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~-~~~~i~~~d~~~ 110 (706)
T 2z3z_A 35 GDNYVFIEGDD-L-VFNKA-NGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLF-TQGGLVGFDMLA 110 (706)
T ss_dssp TTEEEEEETTE-E-EEEC--------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEE-ETTEEEEEETTT
T ss_pred CCeEEEEeCCc-E-EEECC-CCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEE-ECCEEEEEECCC
Confidence 45677777788 8 99998 56552 3444443 46999999998555544 569999999988
Q ss_pred CccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCC-----CeeeEEEEeecccceeEe---eEEEeeCceEEE
Q psy10662 65 PNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL-----SKHMHAYRFDTVRSMLES---SFVGHINDKNFV 136 (221)
Q Consensus 65 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~ 136 (221)
++... +..+...+.+++|+|+|++++++ .++.|.+||+.+ ++........ ...... ....+...+.++
T Consensus 111 ~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~--~~~~~~g~~~~~ee~~~~~~~ 186 (706)
T 2z3z_A 111 RKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDG--TETLVYGQAVHQREFGIEKGT 186 (706)
T ss_dssp TEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCC--BTTEEESSCCGGGCTTCCCSE
T ss_pred CceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCC--CCCeEcccchhhhhcCCCceE
Confidence 76544 34466778999999999999885 678999999987 6554321000 000000 000011225789
Q ss_pred EEecCCCEEEEec---------------------------------CCCeEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662 137 GLATDGDYVACGS---------------------------------ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE 183 (221)
Q Consensus 137 ~~~~~~~~l~~~~---------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (221)
+|+|||++|++++ .+..|++||+.+++..... ..
T Consensus 187 ~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~-------------~~ 253 (706)
T 2z3z_A 187 FWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ-------------TG 253 (706)
T ss_dssp EECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC-------------CC
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec-------------cC
Confidence 9999999999887 4467999998776532211 11
Q ss_pred cccccceeEEEEcCCCcEEEEecCCC-----eEEEEECCcc
Q psy10662 184 DDTNEFVSAVCWRQLSRVLVAANSQG-----IIKIYVIPIR 219 (221)
Q Consensus 184 ~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~ 219 (221)
..+...+..++|+|||++|++++.++ .|.+||+.++
T Consensus 254 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 254 EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 23566789999999999999887665 9999999887
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=2.6e-20 Score=148.63 Aligned_cols=192 Identities=9% Similarity=0.054 Sum_probs=136.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-----Cccceeeeccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-----PNCLRSFVGHI 75 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-----~~~~~~~~~~~ 75 (221)
|| +.++.+ .++.|++||+. +++.. .+..+...+.+++|+|++..++...++.|++||+.+ ++.......+.
T Consensus 91 pd-~~~~~~-~~~~i~~~d~~-~~~~~-~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~ 166 (706)
T 2z3z_A 91 GR-GLVVLF-TQGGLVGFDML-ARKVT-YLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGT 166 (706)
T ss_dssp TT-TEEEEE-ETTEEEEEETT-TTEEE-EEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCB
T ss_pred CC-CeEEEE-ECCEEEEEECC-CCceE-EccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCC
Confidence 56 455554 45999999997 55543 445577789999999976533335789999999988 76655443333
Q ss_pred cc--------------eeEEEEeCCCCEEEEec---------------------------------CCCeEEEEECCCCe
Q psy10662 76 ND--------------KNFVGLATDGDYVACGS---------------------------------ENNSLYIYYKGLSK 108 (221)
Q Consensus 76 ~~--------------v~~~~~~~~~~~l~~~~---------------------------------~d~~v~iwd~~~~~ 108 (221)
.. +.++.|+|||++|++++ .+..|.+||+.+++
T Consensus 167 ~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~ 246 (706)
T 2z3z_A 167 ETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK 246 (706)
T ss_dssp TTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE
T ss_pred CCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc
Confidence 32 48999999999998887 44679999998876
Q ss_pred eeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-----eEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662 109 HMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN-----SLYIYYKGLSKHMHAYRFDTVRSMLERDRNE 183 (221)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (221)
..... ....+...+..++|+|+|+.|++++.++ .|++||+.+++....+.....
T Consensus 247 ~~~~~-----------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~---------- 305 (706)
T 2z3z_A 247 TVYLQ-----------TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD---------- 305 (706)
T ss_dssp EEECC-----------CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC----------
T ss_pred eEeec-----------cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC----------
Confidence 53221 0113456788999999999999887765 899999988743332211100
Q ss_pred cccccceeEEEEcC--CCcEEEEecCCCeEEEEECC
Q psy10662 184 DDTNEFVSAVCWRQ--LSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 184 ~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~~ 217 (221)
......+..++|+| ||++|++++.|+.+++|.++
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred CCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 01111246789999 99999999999999999875
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=1.7e-20 Score=155.46 Aligned_cols=183 Identities=9% Similarity=0.047 Sum_probs=145.2
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC-ceEEEEEecCC-cEEEecCCCcEE-EEEcCCCccceeeeccccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK-AVSYVKFLNKE-DIVSASTDSQLK-LWNINKPNCLRSFVGHIND 77 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~-~l~s~~~d~~v~-~wd~~~~~~~~~~~~~~~~ 77 (221)
|||+.|++++ ++.|.+|++. .+.. ..+..|.. .+..++|+ ++ .++.++.++.+. +||+.+++... +..|...
T Consensus 306 pdG~~la~~~-~~~i~~~~~~-~~~~-~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~ 380 (1045)
T 1k32_A 306 LDGDLIAFVS-RGQAFIQDVS-GTYV-LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGN 380 (1045)
T ss_dssp CGGGCEEEEE-TTEEEEECTT-SSBE-EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCS
T ss_pred CCCCEEEEEE-cCEEEEEcCC-CCce-EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccc
Confidence 6899999987 7899999987 4443 34556777 89999999 54 577777788888 99988766543 3467788
Q ss_pred eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-----
Q psy10662 78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN----- 152 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----- 152 (221)
+..++|+|+|+++++++.++.|++||+.+++.... ..+|...+..++|+|+|++|++++.++
T Consensus 381 ~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~-------------~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 381 VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI-------------ERSREAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-------------EECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEe-------------ccCCCCCccceEECCCCCeEEEEecCcccccc
Confidence 99999999999999999999999999998876543 246777889999999999998887654
Q ss_pred -----eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 153 -----SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 153 -----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
.|++||+.+++ ...+ ..|...+..++|+|||++|+.++.++...+|+..
T Consensus 448 ~~~~~~i~l~d~~~g~-~~~l---------------~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRK-IFAA---------------TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp SCCEEEEEEEETTTTE-EEEC---------------SCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred CCCCCeEEEEECCCCc-EEEe---------------eCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 89999998765 2211 2455667889999999999999988877777653
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=1.7e-20 Score=155.37 Aligned_cols=185 Identities=12% Similarity=0.125 Sum_probs=144.9
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEe-----------ccCceEEEEEe-cCCc-EEEecCCCcEEEEEcCCCcc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG-----------HRKAVSYVKFL-NKED-IVSASTDSQLKLWNINKPNC 67 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----------~~~~i~~~~~~-~~~~-l~s~~~d~~v~~wd~~~~~~ 67 (221)
|||+.|+.+ .++.|++|++. ... +..+.. |...+.+++|+ |++. +++++ ++.+.+|++..++.
T Consensus 254 pDG~~la~~-~~~~i~~~d~~-~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~ 329 (1045)
T 1k32_A 254 TDGRRILFS-KGGSIYIFNPD-TEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYV 329 (1045)
T ss_dssp ESSSCEEEE-ETTEEEEECTT-TCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBE
T ss_pred CCCCEEEEE-eCCEEEEecCC-ceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCce
Confidence 588888887 58999999984 333 234433 44579999999 8765 66655 88999999987765
Q ss_pred ceeeecccc-ceeEEEEeCCCCEEEEecCCCeEE-EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE
Q psy10662 68 LRSFVGHIN-DKNFVGLATDGDYVACGSENNSLY-IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV 145 (221)
Q Consensus 68 ~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~v~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 145 (221)
.. +..|.. .+..++|+ +++.++.++.++.+. +||+..++.. .+.++...+..++|+|+|++|
T Consensus 330 ~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~--------------~l~~~~~~~~~~~~SpDG~~l 393 (1045)
T 1k32_A 330 LK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE--------------KFEENLGNVFAMGVDRNGKFA 393 (1045)
T ss_dssp EE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE--------------ECCCCCCSEEEEEECTTSSEE
T ss_pred EE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce--------------EecCCccceeeeEECCCCCEE
Confidence 43 555666 89999999 999999888888888 8998766432 123566788999999999999
Q ss_pred EEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC----------eEEEEE
Q psy10662 146 ACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG----------IIKIYV 215 (221)
Q Consensus 146 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------~i~iw~ 215 (221)
++++.++.|++||+.+++...... .|...+..++|+|||++|++++.++ .|++||
T Consensus 394 a~~~~~~~v~~~d~~tg~~~~~~~---------------~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 394 VVANDRFEIMTVDLETGKPTVIER---------------SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEE---------------CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred EEECCCCeEEEEECCCCceEEecc---------------CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence 999999999999998877554432 4666788999999999998887644 999999
Q ss_pred CCccc
Q psy10662 216 IPIRV 220 (221)
Q Consensus 216 ~~~~~ 220 (221)
+.+++
T Consensus 459 ~~~g~ 463 (1045)
T 1k32_A 459 MEGRK 463 (1045)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 98764
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=6.4e-21 Score=152.43 Aligned_cols=205 Identities=13% Similarity=0.153 Sum_probs=135.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccC---ceEEEEEecCCc-EEEecC---------CCcEEEEEcCCCcc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK---AVSYVKFLNKED-IVSAST---------DSQLKLWNINKPNC 67 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~-l~s~~~---------d~~v~~wd~~~~~~ 67 (221)
|||+++++ +.|+.|++||+. +++....+..|.. .+.+++|+|++. |++++. ++.|++||+.+++.
T Consensus 25 ~dg~~~~~-~~d~~i~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 25 SGQEYLHQ-SADNNIVLYNIE-TGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp SSSEEEEE-CTTSCEEEEESS-SCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred CCCeEEEE-cCCCCEEEEEcC-CCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 57765555 469999999998 6666666655543 389999998655 666655 68999999998876
Q ss_pred ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc---------eEEEEE
Q psy10662 68 LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND---------KNFVGL 138 (221)
Q Consensus 68 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------v~~~~~ 138 (221)
+.... ....+..++|+|||+.|+.+. ++.|++||+.+++..... .+.... ..+.++... ...++|
T Consensus 103 ~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~-~~~~~~---~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 103 VRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT-FNGREN---KIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp CCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC-CCCBTT---TEEESSCCHHHHHHTTCSSCCEEE
T ss_pred cccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe-cCCCcC---CeEcccccceeeeecccCcccEEE
Confidence 31111 124688999999999998885 779999999887664321 000000 011122211 247999
Q ss_pred ecCCCEEEEecCCC----------------------------------eEEEEEcCCCCceeeeeeeccccccccccccc
Q psy10662 139 ATDGDYVACGSENN----------------------------------SLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184 (221)
Q Consensus 139 ~~~~~~l~~~~~d~----------------------------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (221)
+|||+.|+.++.|. .|++||+.+++....+... ....+.
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~-------~~~~~~ 249 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP-------VPAMIA 249 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC-------CCHHHH
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc-------CCccCC
Confidence 99999999887652 6777877665432101100 001123
Q ss_pred ccccceeEEEEcCCCcEEEEecCC----CeEEEEE----CCccc
Q psy10662 185 DTNEFVSAVCWRQLSRVLVAANSQ----GIIKIYV----IPIRV 220 (221)
Q Consensus 185 ~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iw~----~~~~~ 220 (221)
+|...+..++|+||++++++.... ..|.+|| +.+++
T Consensus 250 ~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~ 293 (719)
T 1z68_A 250 SSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD 293 (719)
T ss_dssp TSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE
T ss_pred CCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc
Confidence 567789999999999888774432 3588899 76654
No 154
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=1.2e-20 Score=150.80 Aligned_cols=191 Identities=10% Similarity=-0.021 Sum_probs=129.0
Q ss_pred CCCceEEEEeCC---------CeEEEEEecCCceeeEEEE---eccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCcc
Q psy10662 1 MNSCHLAFGSAD---------HCVHYYDLRNTKEALAVFK---GHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNC 67 (221)
Q Consensus 1 ~~~~~l~~~~~d---------g~i~i~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~ 67 (221)
|||++|++++.+ +.|++||+. +++. ..+. .|...+..++|+|++ .|+.++. +.|++||+.+++.
T Consensus 70 pDg~~l~~~~~~~~~~~~~~~~~i~~~d~~-~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~ 146 (723)
T 1xfd_A 70 PDREYALFSYNVEPIYQHSYTGYYVLSKIP-HGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA 146 (723)
T ss_dssp TTSSEEEEEESCCCCSSSCCCSEEEEEESS-SCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC
T ss_pred CCCCEEEEEecCccceeecceeeEEEEECC-CCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce
Confidence 799999999774 788899998 4543 3333 344458899999866 4666654 8999999998877
Q ss_pred ceeeeccccce------------------eEEEEeCCCCEEEEecCCC--------------------------------
Q psy10662 68 LRSFVGHINDK------------------NFVGLATDGDYVACGSENN-------------------------------- 97 (221)
Q Consensus 68 ~~~~~~~~~~v------------------~~~~~~~~~~~l~~~~~d~-------------------------------- 97 (221)
......+...+ .+++|+|||++|++++.++
T Consensus 147 ~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 226 (723)
T 1xfd_A 147 IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENP 226 (723)
T ss_dssp EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCC
T ss_pred EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCC
Confidence 66554433333 7899999999998877542
Q ss_pred --eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC----CCeEEEEEcCCCCceeeeeee
Q psy10662 98 --SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE----NNSLYIYYKGLSKHMHAYRFD 171 (221)
Q Consensus 98 --~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~~~~~~~~~~ 171 (221)
.|.+||+.+++....+... .....+...+..++|+|||+++++... +..|++||+.+++....+..
T Consensus 227 ~~~l~~~d~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~- 298 (723)
T 1xfd_A 227 SISLHVIGLNGPTHDLEMMPP-------DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED- 298 (723)
T ss_dssp EEEEEEEESSSSCCCEECCCC-------CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-
T ss_pred eeEEEEEECCCCceeEEeeCC-------ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe-
Confidence 6777777666543222000 000112456889999999998876643 35799999988875544321
Q ss_pred cccccccccccccccccce----eEEEEcCCCcEEEEe--cCCC------eEEEEE
Q psy10662 172 TVRSMLERDRNEDDTNEFV----SAVCWRQLSRVLVAA--NSQG------IIKIYV 215 (221)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~~--~~dg------~i~iw~ 215 (221)
.+...+ ..++|+|||+.|+.. ..++ .|.+|+
T Consensus 299 -------------~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 299 -------------ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp -------------ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred -------------ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 112222 368999999977754 4566 567777
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=2.7e-18 Score=126.64 Aligned_cols=200 Identities=11% Similarity=0.108 Sum_probs=130.0
Q ss_pred CCCceEEEEeCC----CeEEEEEecCC-ce--eeEEEEeccCceEEEEEecCCcEEEec-CCCcEEEEEcCCCccceeee
Q psy10662 1 MNSCHLAFGSAD----HCVHYYDLRNT-KE--ALAVFKGHRKAVSYVKFLNKEDIVSAS-TDSQLKLWNINKPNCLRSFV 72 (221)
Q Consensus 1 ~~~~~l~~~~~d----g~i~i~~~~~~-~~--~~~~~~~~~~~i~~~~~~~~~~l~s~~-~d~~v~~wd~~~~~~~~~~~ 72 (221)
||+++|++++.+ +.|.+|++... ++ .+.....+......+++ +++.|++++ .++.+.+|++.....+..+.
T Consensus 59 pdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~ 137 (361)
T 3scy_A 59 ADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPAS 137 (361)
T ss_dssp TTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCS
T ss_pred CCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccc
Confidence 688989998886 79999999743 33 33334445566778888 666666554 68899999997543332211
Q ss_pred ---cc-----------ccceeEEEEeCCCCEEEE-ecCCCeEEEEECCCCee------eEEEEeecccceeEeeEEEeeC
Q psy10662 73 ---GH-----------INDKNFVGLATDGDYVAC-GSENNSLYIYYKGLSKH------MHAYRFDTVRSMLESSFVGHIN 131 (221)
Q Consensus 73 ---~~-----------~~~v~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 131 (221)
.+ ...+.+++|+|+++++++ ...++.|.+|++..... +... ............
T Consensus 138 ~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~ 211 (361)
T 3scy_A 138 DVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK------GTPEAFKVAPGS 211 (361)
T ss_dssp EEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE------EEEEEEECCTTC
T ss_pred eeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec------ccccceecCCCC
Confidence 11 223578999999996654 45588999998875431 1100 000000112234
Q ss_pred ceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC--C
Q psy10662 132 DKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS--Q 208 (221)
Q Consensus 132 ~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d 208 (221)
.+..++|+|+|+++++++ .++.|.+|++.++......... ....+......++|+|||++|+++.. +
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~----------~~~~~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA----------ADTVNAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE----------SCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe----------cCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence 567899999999887776 6899999999865432211111 11123344679999999999877654 5
Q ss_pred CeEEEEECC
Q psy10662 209 GIIKIYVIP 217 (221)
Q Consensus 209 g~i~iw~~~ 217 (221)
+.|.+|++.
T Consensus 282 ~~i~v~~~~ 290 (361)
T 3scy_A 282 DGVAIFKVD 290 (361)
T ss_dssp CEEEEEEEC
T ss_pred CEEEEEEEc
Confidence 899999995
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=7.1e-19 Score=129.75 Aligned_cols=197 Identities=9% Similarity=0.069 Sum_probs=126.4
Q ss_pred CCceEEEEe-CCCeEEEEEecCCcee--eEEEEec-----------cCceEEEEEecCCc-EEE-ecCCCcEEEEEcCCC
Q psy10662 2 NSCHLAFGS-ADHCVHYYDLRNTKEA--LAVFKGH-----------RKAVSYVKFLNKED-IVS-ASTDSQLKLWNINKP 65 (221)
Q Consensus 2 ~~~~l~~~~-~dg~i~i~~~~~~~~~--~~~~~~~-----------~~~i~~~~~~~~~~-l~s-~~~d~~v~~wd~~~~ 65 (221)
++++|++++ .++.|.+|++...+.. +.....+ ...+.+++|+|++. +++ ...++.|.+|++...
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 456666665 5789999999743321 1111112 22358899998664 544 445899999998754
Q ss_pred cc------c-------eeeeccccceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC
Q psy10662 66 NC------L-------RSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN 131 (221)
Q Consensus 66 ~~------~-------~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (221)
.. + .....+......++|+|+|+++++++ .++.|.+||+.+++....... .....+..
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~--------~~~~~~~~ 259 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV--------AADTVNAQ 259 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE--------ESCSSCCC
T ss_pred CCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE--------ecCCCCCC
Confidence 31 1 11122344578999999999876666 689999999886644221100 01112233
Q ss_pred ceEEEEEecCCCEEEEecCC--CeEEEEEcCC--CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-
Q psy10662 132 DKNFVGLATDGDYVACGSEN--NSLYIYYKGL--SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN- 206 (221)
Q Consensus 132 ~v~~~~~~~~~~~l~~~~~d--~~i~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 206 (221)
.+..++|+|+|++|+++..+ +.|.+|++.. ++......+ .. ...+..++|+|+|++|++++
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~-------------~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ-------------LT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE-------------EC-SSCCCEEEECTTSCEEEEEET
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe-------------cC-CCCCceEEECCCCCEEEEEEC
Confidence 46789999999998776654 8999999862 332111110 01 23567899999999888877
Q ss_pred CCCeEEEEECC--ccc
Q psy10662 207 SQGIIKIYVIP--IRV 220 (221)
Q Consensus 207 ~dg~i~iw~~~--~~~ 220 (221)
.++.|.+|++. +++
T Consensus 326 ~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 326 DTNVIQIFERDQATGL 341 (361)
T ss_dssp TTTEEEEEEECTTTCC
T ss_pred CCCCEEEEEEECCCCc
Confidence 67999996554 554
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=7.1e-19 Score=130.03 Aligned_cols=202 Identities=9% Similarity=0.068 Sum_probs=131.8
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEec-cCceEEEEEecCCc---EEEec-------------CCCcEEEEEcC
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH-RKAVSYVKFLNKED---IVSAS-------------TDSQLKLWNIN 63 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~---l~s~~-------------~d~~v~~wd~~ 63 (221)
||+++|++++.+ .|.+|++..+++........ .+.+..++|+|++. ++++. .++.+.+|++.
T Consensus 49 pdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~ 127 (365)
T 1jof_A 49 HERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVS 127 (365)
T ss_dssp TTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEEC
T ss_pred CCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccC
Confidence 688989988887 99999986345544333211 13356688898765 33543 68999999997
Q ss_pred -CCccceeee----ccccceeEEEEeCCCCEEEEec-CCCeEEEEECC-CCeeeEEEEeecccceeEeeEE--EeeCceE
Q psy10662 64 -KPNCLRSFV----GHINDKNFVGLATDGDYVACGS-ENNSLYIYYKG-LSKHMHAYRFDTVRSMLESSFV--GHINDKN 134 (221)
Q Consensus 64 -~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~ 134 (221)
+++....+. .+...+.+++|+|+|++++++. .++.|.+||+. +++.... ..+. .+...+.
T Consensus 128 ~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~-----------~~~~~~~~g~~p~ 196 (365)
T 1jof_A 128 ETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELV-----------GSVDAPDPGDHPR 196 (365)
T ss_dssp TTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEE-----------EEEECSSTTCCEE
T ss_pred CCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEe-----------eeEecCCCCCCCC
Confidence 455443332 2445789999999999877664 46799999997 5654211 1111 1235688
Q ss_pred EEEEecCCCEEEEecC-CCeEEEEEcCC--CCceeee-eeeccccccccccccccccc------ceeEEE-EcCCCcEEE
Q psy10662 135 FVGLATDGDYVACGSE-NNSLYIYYKGL--SKHMHAY-RFDTVRSMLERDRNEDDTNE------FVSAVC-WRQLSRVLV 203 (221)
Q Consensus 135 ~~~~~~~~~~l~~~~~-d~~i~~~d~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~v~~~~-~~~~~~~l~ 203 (221)
.++|+|+|+++++++. ++.|.+|++.. ++..... ..... .....++.. .+..++ |+|||++|+
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI------PPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS------CTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC------CCCcCCcccccccccccccEEEECCCCCEEE
Confidence 9999999999887765 68999998753 3322100 00000 000112222 578899 999999988
Q ss_pred EecCC-C-----eEEEEECC-ccc
Q psy10662 204 AANSQ-G-----IIKIYVIP-IRV 220 (221)
Q Consensus 204 ~~~~d-g-----~i~iw~~~-~~~ 220 (221)
+++.+ + .|.+|++. +++
T Consensus 271 v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 271 ASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp EEEEESSTTSCCEEEEEEECTTSC
T ss_pred EECCCCCCCCCCeEEEEEECCCCC
Confidence 77643 2 89999985 443
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=2.7e-18 Score=125.95 Aligned_cols=200 Identities=9% Similarity=0.097 Sum_probs=128.8
Q ss_pred eEEEEe----CCCeEEEEEecC-CceeeE-EEEeccCceEEEEEecCCcEEEecC---CCcEEEEEcCCCc--cceeeec
Q psy10662 5 HLAFGS----ADHCVHYYDLRN-TKEALA-VFKGHRKAVSYVKFLNKEDIVSAST---DSQLKLWNINKPN--CLRSFVG 73 (221)
Q Consensus 5 ~l~~~~----~dg~i~i~~~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~l~s~~~---d~~v~~wd~~~~~--~~~~~~~ 73 (221)
.+++|+ .++.|.+|+++. +++... ....+...+..++|+|++.|++++. ++.|.+|++.+++ .+..+..
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~ 83 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA 83 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeec
Confidence 455553 356788888873 333322 2334567788999999776766654 6899999997665 3334445
Q ss_pred cccceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEE-eecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662 74 HINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYR-FDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN 151 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 151 (221)
+...+..++|+|+++++++++ .++.|.+|++........+. ......... .......+.+++|+|+|+++++...+
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~spdg~l~v~~~~~ 161 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPR--PEQDGSHIHYTDLTPDNRLAVIDLGS 161 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSS--TTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCC--ccccCCCceEEEECCCCcEEEEeCCC
Confidence 667789999999999887776 78999999986322221110 000000000 00012347889999999977777778
Q ss_pred CeEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE-ecCCCeEEEEECCc
Q psy10662 152 NSLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA-ANSQGIIKIYVIPI 218 (221)
Q Consensus 152 ~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iw~~~~ 218 (221)
+.|.+|++.. ++......+.. .....+..++|+|||++|++ ...++.|.+|++..
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~------------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTM------------EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEEC------------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CEEEEEEECCCCcEEEeeeEEc------------CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 9999999983 33221111100 11224678999999996666 55789999999873
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=7.7e-20 Score=142.98 Aligned_cols=180 Identities=9% Similarity=-0.003 Sum_probs=126.3
Q ss_pred CCCceEEEEeC---CCeEEEEEecC--CceeeEEEEeccCceEEEEEecCC--cEEEecCCCcEEEEEcCCCccceeeec
Q psy10662 1 MNSCHLAFGSA---DHCVHYYDLRN--TKEALAVFKGHRKAVSYVKFLNKE--DIVSASTDSQLKLWNINKPNCLRSFVG 73 (221)
Q Consensus 1 ~~~~~l~~~~~---dg~i~i~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~~~~~~~~~ 73 (221)
|| +++++++. +....+|.+.. .+... .+.. ...+...+|+|++ .+++.+.++.+.+||+.+++......
T Consensus 74 pd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~- 149 (582)
T 3o4h_A 74 VG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR- 149 (582)
T ss_dssp CS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-
T ss_pred CC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-
Confidence 45 66777665 45567766653 33322 3322 2234456777643 44555555556699998887654443
Q ss_pred cccceeEEEEeCCCCEEEEecCC----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec
Q psy10662 74 HINDKNFVGLATDGDYVACGSEN----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS 149 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 149 (221)
+.. .+++|+|||+++++++.+ +.|.+||+.+++.. .+..+...+..++|+|||+.|+++.
T Consensus 150 ~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~--------------~l~~~~~~~~~~~~SpDG~~l~~~~ 213 (582)
T 3o4h_A 150 LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR--------------VFDSGEGSFSSASISPGMKVTAGLE 213 (582)
T ss_dssp ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE--------------EECCSSCEEEEEEECTTSCEEEEEE
T ss_pred CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce--------------EeecCCCccccceECCCCCEEEEcc
Confidence 333 889999999999988776 78999999877653 2355667789999999999999888
Q ss_pred CCC--eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEE--------EcCCCcEEEEecCCCeEEEEEC
Q psy10662 150 ENN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVC--------WRQLSRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 150 ~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~dg~i~iw~~ 216 (221)
.++ .|++||+.+++.. .+. .|...+..++ |+|||.++++++.|+.+++|++
T Consensus 214 ~~~~~~i~~~d~~~~~~~-~~~---------------~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 214 TAREARLVTVDPRDGSVE-DLE---------------LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSSCEEEEEECTTTCCEE-ECC---------------CSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCCeeEEEEEcCCCCcEE-Ecc---------------CCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 888 8999999877654 221 2333344444 9999998999999999999998
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=3.7e-18 Score=126.22 Aligned_cols=193 Identities=12% Similarity=0.079 Sum_probs=125.1
Q ss_pred CCCeEEEEEecCCceeeEEEEe----ccCceEEEEEecCCc-EEEec-CCCcEEEEEcC-CCccc--eeee--cccccee
Q psy10662 11 ADHCVHYYDLRNTKEALAVFKG----HRKAVSYVKFLNKED-IVSAS-TDSQLKLWNIN-KPNCL--RSFV--GHINDKN 79 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~-l~s~~-~d~~v~~wd~~-~~~~~--~~~~--~~~~~v~ 79 (221)
.+|.+.+|++...++....+.. +...+.+++|+|++. ++++. .++.|++||+. +++.. ..+. .+...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 6899999999744554443332 456799999998664 65554 46899999998 66543 2232 2345689
Q ss_pred EEEEeCCCCEEEEecC-CCeEEEEECC--CCeeeEEEE-eecccceeEeeEEEeeC------ceEEEE-EecCCCEEEEe
Q psy10662 80 FVGLATDGDYVACGSE-NNSLYIYYKG--LSKHMHAYR-FDTVRSMLESSFVGHIN------DKNFVG-LATDGDYVACG 148 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~-d~~v~iwd~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~------~v~~~~-~~~~~~~l~~~ 148 (221)
.++|+|+|+++++++. ++.|.+|++. +++...... ..... ..+.++.. .+..++ |+|+|++|+++
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~ 272 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP----PGIPDRDPETGKGLYRADVCALTFSGKYMFAS 272 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC----TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC----CCcCCcccccccccccccEEEECCCCCEEEEE
Confidence 9999999998877664 7899999765 444321100 00000 00012222 478899 99999988877
Q ss_pred cCCC------eEEEEEcC-CCCceeeeeeecccccccccccccccccceeEEEEcC---CCcEEEEecC-CCeEEEEECC
Q psy10662 149 SENN------SLYIYYKG-LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ---LSRVLVAANS-QGIIKIYVIP 217 (221)
Q Consensus 149 ~~d~------~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~-dg~i~iw~~~ 217 (221)
+.+. .|.+|++. +++........ ..+...+..++|+| +|++|++++. ++.|.+|++.
T Consensus 273 ~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~------------~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 273 SRANKFELQGYIAGFKLRDCGSIEKQLFLS------------PTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEESSTTSCCEEEEEEECTTSCEEEEEEEE------------ECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred CCCCCCCCCCeEEEEEECCCCCEEEeeeee------------ecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 6432 89999986 34322111000 01223456789999 8999999886 5899999986
Q ss_pred cc
Q psy10662 218 IR 219 (221)
Q Consensus 218 ~~ 219 (221)
..
T Consensus 341 ~~ 342 (365)
T 1jof_A 341 DE 342 (365)
T ss_dssp TT
T ss_pred hh
Confidence 54
No 161
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.81 E-value=2e-17 Score=117.55 Aligned_cols=191 Identities=10% Similarity=0.030 Sum_probs=148.2
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEecc-CceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccc-ccee
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHR-KAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHI-NDKN 79 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~ 79 (221)
.+++|++++.++.|.+||.+ +++.+..+..+. ..+.++.+.|++.++. +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~-tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKD-TKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETT-TTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECC-CCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 46889999999999999986 788888888765 4788999998777666 56888999998 888888886543 4788
Q ss_pred EEEEeCCCCEEEEecC-CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662 80 FVGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY 158 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 158 (221)
++.+.|+|+++++.+. ++.|..+|. .++.+..+...... ..+......+++.++|+++++...++.|..||
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~-------~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d 152 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGI-------ERPHAQFRQINKNKKGNYLVPLFATSEVREIA 152 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSC-------SSGGGSCSCCEECTTSCEEEEETTTTEEEEEC
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCC-------CcccccccCceECCCCCEEEEecCCCEEEEEC
Confidence 9999999999998877 778888875 67777665332110 11112344567889999999999999999999
Q ss_pred cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.. ++.+..+.. ...+.++.+.++|+++++++.++.|..+|..+|+
T Consensus 153 ~~-G~~~w~~~~----------------~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 153 PN-GQLLNSVKL----------------SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp TT-SCEEEEEEC----------------SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred CC-CCEEEEEEC----------------CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 87 877666541 1234567788999999999888899999988765
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=1.4e-17 Score=123.79 Aligned_cols=191 Identities=12% Similarity=0.004 Sum_probs=132.2
Q ss_pred CCCceEEEEeC-CC--eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeecccc
Q psy10662 1 MNSCHLAFGSA-DH--CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVGHIN 76 (221)
Q Consensus 1 ~~~~~l~~~~~-dg--~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~ 76 (221)
|||++|+.++. +| .|.+||+. +++.......+...+..++|+|++ .|+.++.++.|++||+.+++....+..+..
T Consensus 45 pDg~~l~~~~~~~g~~~l~~~d~~-~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~ 123 (388)
T 3pe7_A 45 RDGSKLLFGGAFDGPWNYYLLDLN-TQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE 123 (388)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETT-TCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT
T ss_pred CCCCEEEEEEcCCCCceEEEEeCC-CCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh
Confidence 78999998887 66 48888887 566655555555555577899865 588888889999999999887665555555
Q ss_pred ceeEEE--EeCCCCEEEE----------------------ecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc
Q psy10662 77 DKNFVG--LATDGDYVAC----------------------GSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND 132 (221)
Q Consensus 77 ~v~~~~--~~~~~~~l~~----------------------~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (221)
.+.... ++|++.+++. ...+..|.+||+.+++... +..+...
T Consensus 124 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~--------------l~~~~~~ 189 (388)
T 3pe7_A 124 WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV--------------ILQENQW 189 (388)
T ss_dssp EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE--------------EEEESSC
T ss_pred cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE--------------eecCCcc
Confidence 444333 4899988763 2345679999998876432 2345667
Q ss_pred eEEEEEec-CCCEEEEecCC------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662 133 KNFVGLAT-DGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA 205 (221)
Q Consensus 133 v~~~~~~~-~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 205 (221)
+..++|+| +|+.|+....+ ..|.++|...+...... . ......+..++|+|||+.|+..
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-------------~-~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 190 LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK-------------T-HAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC-------------C-CCTTEEEEEEEECTTSSCEEEE
T ss_pred ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee-------------e-CCCCcccccceECCCCCEEEEE
Confidence 88999999 99988876653 36777776544322111 0 0111357788999999987664
Q ss_pred cC-C----CeEEEEECCccc
Q psy10662 206 NS-Q----GIIKIYVIPIRV 220 (221)
Q Consensus 206 ~~-d----g~i~iw~~~~~~ 220 (221)
+. + ..|.+||+.+++
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp EEETTCCCEEEEEECTTTCC
T ss_pred ecCCCCCcceEEEEecCCCc
Confidence 43 2 249999998765
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=1.6e-18 Score=139.13 Aligned_cols=204 Identities=9% Similarity=0.107 Sum_probs=132.2
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCc-----eEEEEEecCCc-EEEecCC---------CcEEEEEcCCC
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKA-----VSYVKFLNKED-IVSASTD---------SQLKLWNINKP 65 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~-l~s~~~d---------~~v~~wd~~~~ 65 (221)
||+++++++ ||.|++||+. +++....+..|... ...+.|+|++. |+.++.+ +.+.+||+.++
T Consensus 26 ~dg~~~~~~--~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~ 102 (740)
T 4a5s_A 26 SDHEYLYKQ--ENNILVFNAE-YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR 102 (740)
T ss_dssp SSSEEEEEE--TTEEEEEETT-TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred CCCcEEEEc--CCcEEEEECC-CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC
Confidence 688888886 8999999998 66666667766543 23478898655 6666655 56779999988
Q ss_pred ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEee---------CceEEE
Q psy10662 66 NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHI---------NDKNFV 136 (221)
Q Consensus 66 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~ 136 (221)
+... +..+...+...+|+|||+.||.+ .++.|.+||+.+++..+.- .+.... ..+.++. .....+
T Consensus 103 ~~~~-l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt-~~g~~~---~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 103 QLIT-EERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRIT-WTGKED---IIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp EECC-SSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECC-SCCBTT---TEEESBCCHHHHHHTSSSSBCE
T ss_pred cEEE-cccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEc-CCCCcc---ceecCcccccccchhcCCCcce
Confidence 7654 55677789999999999999888 4678999999887653211 110000 0111222 122358
Q ss_pred EEecCCCEEEEecCCCe-EEEE-----------------------------------EcCC---CCceeeeeeecccccc
Q psy10662 137 GLATDGDYVACGSENNS-LYIY-----------------------------------YKGL---SKHMHAYRFDTVRSML 177 (221)
Q Consensus 137 ~~~~~~~~l~~~~~d~~-i~~~-----------------------------------d~~~---~~~~~~~~~~~~~~~~ 177 (221)
.|||||+.|+..+.|.. +.+| |+.+ ++.......
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l------- 249 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI------- 249 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE-------
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe-------
Confidence 99999999988764432 4444 4433 211000000
Q ss_pred cccccccccccceeEEEEcCCCcEEEEec----CCCeEEEEECCccc
Q psy10662 178 ERDRNEDDTNEFVSAVCWRQLSRVLVAAN----SQGIIKIYVIPIRV 220 (221)
Q Consensus 178 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~iw~~~~~~ 220 (221)
.......++...+..++|+|||++++... .+..|.+||+.+++
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 00000113667789999999999766553 34479999988764
No 164
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=144.32 Aligned_cols=198 Identities=10% Similarity=0.058 Sum_probs=126.1
Q ss_pred CCCceEEEEeC---------CCeEEEEEecCCceee--EEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccc
Q psy10662 1 MNSCHLAFGSA---------DHCVHYYDLRNTKEAL--AVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCL 68 (221)
Q Consensus 1 ~~~~~l~~~~~---------dg~i~i~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~ 68 (221)
|||++|++++. ++.|++||+. +++.+ ..+ ...+..++|+|++. |+.+ .++.|++||+.+++..
T Consensus 69 pDg~~la~~~~~~~~~~~s~~~~i~~~d~~-~g~~~~~~~l---~~~~~~~~~SPDG~~la~~-~~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 69 PDRQFVYLESDYSKLWRYSYTATYYIYDLS-NGEFVRGNEL---PRPIQYLCWSPVGSKLAYV-YQNNIYLKQRPGDPPF 143 (719)
T ss_dssp TTSSEEEEEEEEEECSSSCEEEEEEEEETT-TTEECCSSCC---CSSBCCEEECSSTTCEEEE-ETTEEEEESSTTSCCE
T ss_pred CCCCeEEEEecCceeEEeecceEEEEEECC-CCccccceec---CcccccceECCCCCEEEEE-ECCeEEEEeCCCCCcE
Confidence 79999999876 7899999998 55542 222 35688999999765 5555 5889999999887765
Q ss_pred eee-eccccce-----------------eEEEEeCCCCEEEEecCCC---------------------------------
Q psy10662 69 RSF-VGHINDK-----------------NFVGLATDGDYVACGSENN--------------------------------- 97 (221)
Q Consensus 69 ~~~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~--------------------------------- 97 (221)
... .++...+ .+++|+|||++|++++.|.
T Consensus 144 ~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~ 223 (719)
T 1z68_A 144 QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPV 223 (719)
T ss_dssp ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCE
T ss_pred EEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCe
Confidence 432 2222212 4899999999999887542
Q ss_pred -eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC----CeEEEEE----cCCCCceeee
Q psy10662 98 -SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN----NSLYIYY----KGLSKHMHAY 168 (221)
Q Consensus 98 -~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d----~~~~~~~~~~ 168 (221)
.|.+||+.+++....+.... ...+.++...+..++|+||++++++.... ..|.+|| +.+++....+
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~ 298 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPV-----PAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQ 298 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCC-----CHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred eEEEEEECCCCCccceeEccC-----CccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEE
Confidence 67788877665320000000 01123456678899999998877764432 3488888 6554432211
Q ss_pred eeeccccccccccccccccccee-----EEEEcCCCcEEEE--ecCCC--eEEEEECCcc
Q psy10662 169 RFDTVRSMLERDRNEDDTNEFVS-----AVCWRQLSRVLVA--ANSQG--IIKIYVIPIR 219 (221)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~--~~~dg--~i~iw~~~~~ 219 (221)
. .....|...+. .+.|+|||+.|+. ...+| .|.+|++.++
T Consensus 299 ~-----------~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~ 347 (719)
T 1z68_A 299 E-----------HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE 347 (719)
T ss_dssp E-----------EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST
T ss_pred e-----------cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC
Confidence 0 00013444454 7899999996654 44455 5666776654
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.80 E-value=8e-17 Score=118.85 Aligned_cols=108 Identities=15% Similarity=0.218 Sum_probs=82.3
Q ss_pred CCceEEEEe------CCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEec----------CCCcEEEEEcCC
Q psy10662 2 NSCHLAFGS------ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAS----------TDSQLKLWNINK 64 (221)
Q Consensus 2 ~~~~l~~~~------~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~----------~d~~v~~wd~~~ 64 (221)
+++++.+.. .|+.|.+||.. +++.+..+..+..+ .++|+|++. ++++. .++.|.+||..+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~-t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYT-NGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETT-TCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCEEEEECCCCCccccCeEEEEECC-CCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 566666654 36799999987 67777777766555 899998654 55554 367899999998
Q ss_pred Cccceeeecc------ccceeEEEEeCCCCEEEEecC--CCeEEEEECCCCeeeEE
Q psy10662 65 PNCLRSFVGH------INDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHA 112 (221)
Q Consensus 65 ~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~ 112 (221)
.+.+..+... ......++++|+|++++++.. ++.|.+||+.+++.+..
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 8888776532 234678999999999887763 68899999999887766
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=2.1e-17 Score=120.52 Aligned_cols=194 Identities=7% Similarity=0.071 Sum_probs=139.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEE---------eccCceEEEEEec-CCcEEEec--CCCcEEEEEcCCCccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK---------GHRKAVSYVKFLN-KEDIVSAS--TDSQLKLWNINKPNCL 68 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~---------~~~~~i~~~~~~~-~~~l~s~~--~d~~v~~wd~~~~~~~ 68 (221)
|+|+++++...++.|++|+.......+..+. .+-.....++++| ++.++.+. .++.|++|| .+++.+
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE
Confidence 5788888888899999999762222455552 3344689999998 66655444 589999999 566666
Q ss_pred eeeec----------cccceeEEEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662 69 RSFVG----------HINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG 137 (221)
Q Consensus 69 ~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 137 (221)
..+.. +......++++|+ +.++++...++.|++||..+++.+..+.. ..+...+..++
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~-----------~~~~~~~~~~~ 247 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH-----------ASFGRNVFAIS 247 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC-----------TTTTTCEEEEE
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec-----------cccCCCcceee
Confidence 65532 2234789999998 77778888899999999988887766421 12334566777
Q ss_pred Eec------CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662 138 LAT------DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII 211 (221)
Q Consensus 138 ~~~------~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 211 (221)
|+| +++..++...+..|++||..+++.+..+.. ...+...+..++++|+|.++++...++.|
T Consensus 248 ~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~------------~~~~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 248 YIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP------------VRKHFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp EETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC------------SSSCCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred ecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC------------CCCccCCeeEEEECCCCCEEEEECCCCEE
Confidence 777 444444444566899999988877665521 12345567899999999888888899999
Q ss_pred EEEECCc
Q psy10662 212 KIYVIPI 218 (221)
Q Consensus 212 ~iw~~~~ 218 (221)
++|++..
T Consensus 316 ~~~~~~~ 322 (329)
T 3fvz_A 316 WKFTLTE 322 (329)
T ss_dssp EEEEEEE
T ss_pred EEEeCCc
Confidence 9999864
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=1.7e-17 Score=131.49 Aligned_cols=198 Identities=9% Similarity=-0.032 Sum_probs=128.0
Q ss_pred CCCce-EEEEeC-CCeEEEEEecCCc-eeeEEEEe-----ccCceEEEEEecCC-cEEEecCC----------CcEEEEE
Q psy10662 1 MNSCH-LAFGSA-DHCVHYYDLRNTK-EALAVFKG-----HRKAVSYVKFLNKE-DIVSASTD----------SQLKLWN 61 (221)
Q Consensus 1 ~~~~~-l~~~~~-dg~i~i~~~~~~~-~~~~~~~~-----~~~~i~~~~~~~~~-~l~s~~~d----------~~v~~wd 61 (221)
|||+. |+.++. +..|.++++...+ .....+.. |...+..++|+|++ .|++++.+ ..|++||
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 68888 776654 4455555543001 33444544 56678999999865 57777766 5899999
Q ss_pred cCC------Cccceeee-ccccceeEEEEeCCCCEEEEecCC--------CeEEEEECC-CCe--eeEEEEeecccceeE
Q psy10662 62 INK------PNCLRSFV-GHINDKNFVGLATDGDYVACGSEN--------NSLYIYYKG-LSK--HMHAYRFDTVRSMLE 123 (221)
Q Consensus 62 ~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~iwd~~-~~~--~~~~~~~~~~~~~~~ 123 (221)
+.+ ++. ..+. .+...+..++|+|||++|+.++.+ ..|.+||+. +++ ....+
T Consensus 168 ~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l---------- 236 (662)
T 3azo_A 168 LDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL---------- 236 (662)
T ss_dssp TTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE----------
T ss_pred CCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe----------
Confidence 987 443 4444 556678889999999999877644 479999998 452 22221
Q ss_pred eeEEEeeCceEEEEEecCCCEEEEecCCC--eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE
Q psy10662 124 SSFVGHINDKNFVGLATDGDYVACGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV 201 (221)
Q Consensus 124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 201 (221)
..++...+..++|+|||+++++++.++ .|.+||+.+++........ ..... ..-...+..++|+|++++
T Consensus 237 --~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~--~~~~~-----p~w~~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 237 --LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE--EEFAG-----PLWTPGMRWFAPLANGLI 307 (662)
T ss_dssp --EEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS--SBSSC-----CCCSTTCCSEEECTTSCE
T ss_pred --CCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc--ccccC-----ccccccCceEeEeCCCEE
Confidence 233457788999999999888888888 5666665454432211100 00000 000111467899999999
Q ss_pred EEEecCCCeEEEE--ECCcc
Q psy10662 202 LVAANSQGIIKIY--VIPIR 219 (221)
Q Consensus 202 l~~~~~dg~i~iw--~~~~~ 219 (221)
+++++. +.+++| ++.++
T Consensus 308 ~~~~~~-~~~~l~~~d~~~~ 326 (662)
T 3azo_A 308 AVVHGK-GAAVLGILDPESG 326 (662)
T ss_dssp EEEEBS-SSCEEEEEETTTT
T ss_pred EEEEEc-CccEEEEEECCCC
Confidence 999998 999999 55444
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=5.8e-16 Score=110.60 Aligned_cols=189 Identities=12% Similarity=0.186 Sum_probs=135.0
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEe------ccCceEEEEEe-cCCcEEEecC--CCcEEEEEcCCCccceee
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG------HRKAVSYVKFL-NKEDIVSAST--DSQLKLWNINKPNCLRSF 71 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~------~~~~i~~~~~~-~~~~l~s~~~--d~~v~~wd~~~~~~~~~~ 71 (221)
|+++++++...++.|.+||.. ++.+..+.. +...+..+++. +++.++.+.. ++.|.+|| .+++.+..+
T Consensus 39 ~~g~l~v~~~~~~~i~~~d~~--g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~ 115 (286)
T 1q7f_A 39 AQNDIIVADTNNHRIQIFDKE--GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKF 115 (286)
T ss_dssp TTCCEEEEEGGGTEEEEECTT--SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEE
T ss_pred CCCCEEEEECCCCEEEEECCC--CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEe
Confidence 467888888889999999976 444555532 33568999995 6666665553 89999999 566666555
Q ss_pred e-ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662 72 V-GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE 150 (221)
Q Consensus 72 ~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 150 (221)
. .+...+..++++|+++++++...++.|.+||.. ++.+..+. ...+...+..++++|+++++++...
T Consensus 116 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~-----------~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 116 GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFG-----------CSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEE-----------CTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred cCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeC-----------CCCccCCcEEEEECCCCCEEEEECC
Confidence 3 234568899999999988888888999999964 44433321 0122345789999999998888888
Q ss_pred CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC-eEEEEECCc
Q psy10662 151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG-IIKIYVIPI 218 (221)
Q Consensus 151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iw~~~~ 218 (221)
++.|++||.. ++.+..+. . .++...+..++++++|+++++...++ .|.+|+...
T Consensus 184 ~~~i~~~~~~-g~~~~~~~--~-----------~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 184 AHCVKVFNYE-GQYLRQIG--G-----------EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp GTEEEEEETT-CCEEEEES--C-----------TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred CCEEEEEcCC-CCEEEEEc--c-----------CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence 9999999974 33322221 0 12234578999999999888888776 999999653
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=2.8e-17 Score=131.87 Aligned_cols=206 Identities=10% Similarity=0.017 Sum_probs=125.2
Q ss_pred CCCceEEEEeCC---------CeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCcccee
Q psy10662 1 MNSCHLAFGSAD---------HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRS 70 (221)
Q Consensus 1 ~~~~~l~~~~~d---------g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~ 70 (221)
|||++|+.++.+ +.+.+||+. +++.. .+..|.+.+...+|+|++. |+.+ .++.|++|++.+++..+.
T Consensus 71 pdg~~l~~~~~~~~~~r~~~~~~~~~~d~~-~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~l 147 (740)
T 4a5s_A 71 PDGQFILLEYNYVKQWRHSYTASYDIYDLN-KRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRI 147 (740)
T ss_dssp TTSSEEEEEEEEEECSSSCEEEEEEEEETT-TTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEEC
T ss_pred CCCCEEEEEECCeeeEEEccceEEEEEECC-CCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEE
Confidence 799999998876 567799998 55543 4556778899999999665 5555 678999999988765432
Q ss_pred e-eccccce-----------------eEEEEeCCCCEEEEecCCCe-EEEEECCC---C-------------------ee
Q psy10662 71 F-VGHINDK-----------------NFVGLATDGDYVACGSENNS-LYIYYKGL---S-------------------KH 109 (221)
Q Consensus 71 ~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~~-v~iwd~~~---~-------------------~~ 109 (221)
. .++...+ ..+.|+|||++|+.++.|.. +.+|++.. . ..
T Consensus 148 t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~ 227 (740)
T 4a5s_A 148 TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPT 227 (740)
T ss_dssp CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCE
T ss_pred cCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCe
Confidence 1 2222212 35899999999887754322 44443210 0 00
Q ss_pred eEEEEeeccc---ce--eEeeEE------EeeCceEEEEEecCCCEEEEec----CCCeEEEEEcCCCC----ceeeeee
Q psy10662 110 MHAYRFDTVR---SM--LESSFV------GHINDKNFVGLATDGDYVACGS----ENNSLYIYYKGLSK----HMHAYRF 170 (221)
Q Consensus 110 ~~~~~~~~~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~----~d~~i~~~d~~~~~----~~~~~~~ 170 (221)
....-++... .. ....+. ++...+..++|+|||+.++... .+..|.+||+.+++ +......
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l 307 (740)
T 4a5s_A 228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH 307 (740)
T ss_dssp EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEe
Confidence 0011112222 10 011121 2556788999999999666543 33479999998876 1111100
Q ss_pred eccccccccccccccccccee-----EEEEcCCCcEEE-EecC-C--CeEEEEECCccc
Q psy10662 171 DTVRSMLERDRNEDDTNEFVS-----AVCWRQLSRVLV-AANS-Q--GIIKIYVIPIRV 220 (221)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~-~~~~-d--g~i~iw~~~~~~ 220 (221)
....+...|. .+.|+|||+.|+ ..+. + ..|.+|++.+++
T Consensus 308 -----------~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 308 -----------IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp -----------EEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred -----------eeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 0012333333 678999999877 5553 3 468888887654
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=5.2e-16 Score=113.13 Aligned_cols=202 Identities=10% Similarity=0.045 Sum_probs=135.7
Q ss_pred CCCceEEEEeCC------------------------CeEEEEEecCCceeeEEEE-eccCceEEEEEecCCc-EEEecCC
Q psy10662 1 MNSCHLAFGSAD------------------------HCVHYYDLRNTKEALAVFK-GHRKAVSYVKFLNKED-IVSASTD 54 (221)
Q Consensus 1 ~~~~~l~~~~~d------------------------g~i~i~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~-l~s~~~d 54 (221)
|+|+++++...+ +.|.+||.. +++.+..+. .+-.....+++++++. +++...+
T Consensus 33 ~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~ 111 (329)
T 3fvz_A 33 SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN-NAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVAL 111 (329)
T ss_dssp TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT-TCCEEEEECTTTCSSEEEEEECTTSCEEEEETTT
T ss_pred CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC-CCeEEeccCCCccCCceEEEECCCCCEEEEECCC
Confidence 578888887776 479999987 566655544 2345789999997554 5566778
Q ss_pred CcEEEEEcCCCc-cceee---------eccccceeEEEEeC-CCCEEEEec-CCCeEEEEECCCCeeeEEEEeeccccee
Q psy10662 55 SQLKLWNINKPN-CLRSF---------VGHINDKNFVGLAT-DGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSML 122 (221)
Q Consensus 55 ~~v~~wd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 122 (221)
+.|++||..... .+..+ ..+......++++| ++.++++.+ .++.|++|| ..++.+..+........
T Consensus 112 ~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~- 189 (329)
T 3fvz_A 112 HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSS- 189 (329)
T ss_dssp TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSS-
T ss_pred CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCC-
Confidence 999999985442 44444 23334678999999 788888886 689999999 45555544311100000
Q ss_pred EeeEEEeeCceEEEEEecC-CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC----
Q psy10662 123 ESSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ---- 197 (221)
Q Consensus 123 ~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---- 197 (221)
...++...+..++++|+ ++++++...++.|++||..+++.+..+.. ..+...+..++|+|
T Consensus 190 --~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~-------------~~~~~~~~~~~~~pg~~~ 254 (329)
T 3fvz_A 190 --PRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH-------------ASFGRNVFAISYIPGFLF 254 (329)
T ss_dssp --CCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC-------------TTTTTCEEEEEEETTEEE
T ss_pred --CCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec-------------cccCCCcceeeecCCEEE
Confidence 00112345789999998 77888888899999999987776655531 12344577888888
Q ss_pred --CCcEEEEecCCCeEEEEECCccc
Q psy10662 198 --LSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 198 --~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+|+..++...+..|++|++.+++
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g~ 279 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSGE 279 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTCC
T ss_pred EeCCCEEeccCCCcEEEEEEcCCCe
Confidence 33333333445689999987765
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=7.2e-16 Score=110.09 Aligned_cols=187 Identities=16% Similarity=0.152 Sum_probs=129.7
Q ss_pred CCceEEEEeC-CCeEEEEEecCCceeeEEEEe-ccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeee--cccc
Q psy10662 2 NSCHLAFGSA-DHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFV--GHIN 76 (221)
Q Consensus 2 ~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~--~~~~ 76 (221)
+++++++... ++.|.+||. .++.+..+.. +...+.++++.+++. +++...++.|.+||.. ++.+..+. .+..
T Consensus 88 ~g~l~v~~~~~~~~i~~~d~--~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~ 164 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYNQ--YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLE 164 (286)
T ss_dssp TTEEEEEECGGGCEEEEECT--TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCS
T ss_pred CCeEEEEcCCCCCEEEEECC--CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccC
Confidence 4555655533 789999994 4555555532 345689999998655 4455668899999964 55555443 3345
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-eEE
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN-SLY 155 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~ 155 (221)
.+..++++|+++++++...++.|.+||.. ++.+..+. ..++...+..++++|+|+++++...++ .|.
T Consensus 165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~-----------~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIG-----------GEGITNYPIGVGINSNGEILIADNHNNFNLT 232 (286)
T ss_dssp SEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEES-----------CTTTSCSEEEEEECTTCCEEEEECSSSCEEE
T ss_pred CcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEc-----------cCCccCCCcEEEECCCCCEEEEeCCCCEEEE
Confidence 68999999999988888889999999974 34333320 011124678899999999888887776 999
Q ss_pred EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
+||. .++.+..+... .....+.+++++|+|+++++ +.|+.|++|++..
T Consensus 233 ~~~~-~g~~~~~~~~~-------------~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 233 IFTQ-DGQLISALESK-------------VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EECT-TSCEEEEEEES-------------SCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EECC-CCCEEEEEccc-------------CCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 9995 34444433211 11224678999999987777 5699999999864
No 172
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=3.2e-15 Score=108.94 Aligned_cols=186 Identities=11% Similarity=-0.002 Sum_probs=135.3
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEec-CCCcEEEEEcCCCccceeeeccc-----c
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAS-TDSQLKLWNINKPNCLRSFVGHI-----N 76 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~-~d~~v~~wd~~~~~~~~~~~~~~-----~ 76 (221)
++++++...++.|.+||.. +++.+..+. .......+++++++.++.+. .++.|.+||..+++....+.... .
T Consensus 54 ~~lyv~~~~~~~v~viD~~-t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~ 131 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDIN-TFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp TEEEEEEGGGTEEEEEETT-TCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred CEEEEEEcCCCEEEEEECc-ccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC
Confidence 4456666667999999998 777777775 45678999998766766655 79999999999988776664332 1
Q ss_pred ceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC----
Q psy10662 77 DKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN---- 151 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---- 151 (221)
....+++ .++..+++.. .++.|.++|+.+++.+..+. .......++++|+|++++++..+
T Consensus 132 ~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~--------------~g~~p~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 132 STEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELT--------------IGIQPTSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp BCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEE--------------CSSCBCCCEECTTSEEEEEBCCBCTTC
T ss_pred CcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE--------------cCCCccceEEcCCCCEEEEECCCccCC
Confidence 4566777 3444444443 48899999999988776541 12234678899999987776654
Q ss_pred ------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662 152 ------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL 221 (221)
Q Consensus 152 ------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l 221 (221)
+.|.++|..+.+....+... .......++|+|+++.|+++.. .|.+||..++++
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~~~~~~--------------~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEKQFKFK--------------LGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEEEEECC--------------TTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred ccccCCceEEEEECCCCeEEEEEecC--------------CCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 78999999887765544311 1124688999999999988765 899999987753
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=1.4e-16 Score=126.29 Aligned_cols=187 Identities=12% Similarity=-0.045 Sum_probs=123.5
Q ss_pred ceEEEE--eCCCeEEEEEecCCceeeEEEEeccCceE---------EEEEe--cC-Cc-EEEec-CCCcEEEEEcC--CC
Q psy10662 4 CHLAFG--SADHCVHYYDLRNTKEALAVFKGHRKAVS---------YVKFL--NK-ED-IVSAS-TDSQLKLWNIN--KP 65 (221)
Q Consensus 4 ~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~~i~---------~~~~~--~~-~~-l~s~~-~d~~v~~wd~~--~~ 65 (221)
-.++.. +.++...||... .+.....+..+...+. ...|+ |+ +. |+.++ .+..|.++++. ..
T Consensus 36 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~ 114 (662)
T 3azo_A 36 VWWVAPRPAEAGRATLVRRR-ADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGG 114 (662)
T ss_dssp EEEEEEETTTTTEEEEEEEC-TTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTC
T ss_pred EEEEecCcccCCcEEEEEEC-CCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCC
Confidence 344555 457889999975 3333455655665655 66666 64 44 44443 35667777765 20
Q ss_pred ccceeeec-----cccceeEEEEeCCCCEEEEecCC----------CeEEEEECCC------CeeeEEEEeecccceeEe
Q psy10662 66 NCLRSFVG-----HINDKNFVGLATDGDYVACGSEN----------NSLYIYYKGL------SKHMHAYRFDTVRSMLES 124 (221)
Q Consensus 66 ~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~v~iwd~~~------~~~~~~~~~~~~~~~~~~ 124 (221)
.....+.. |...+..++|+|+|+.|++++.+ ..|.+||+.+ ++.. .
T Consensus 115 ~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~------------ 181 (662)
T 3azo_A 115 AVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-E------------ 181 (662)
T ss_dssp CCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-E------------
T ss_pred CCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-E------------
Confidence 33444544 56678899999999999888876 5799999887 4331 1
Q ss_pred eEE-EeeCceEEEEEecCCCEEEEecCC--------CeEEEEEcC-CCC--ceeeeeeecccccccccccccccccceeE
Q psy10662 125 SFV-GHINDKNFVGLATDGDYVACGSEN--------NSLYIYYKG-LSK--HMHAYRFDTVRSMLERDRNEDDTNEFVSA 192 (221)
Q Consensus 125 ~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~~d~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 192 (221)
+. .+...+..++|+|||++|+..+.+ ..|++||+. ++. ....+. .++...+..
T Consensus 182 -l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~--------------~~~~~~~~~ 246 (662)
T 3azo_A 182 -LSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL--------------GGPEEAIAQ 246 (662)
T ss_dssp -SSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE--------------EETTBCEEE
T ss_pred -EEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC--------------CCCCceEcc
Confidence 12 334566778999999999877754 379999998 452 111111 133567889
Q ss_pred EEEcCCCcEEEEecCCC--eEEEEECCcc
Q psy10662 193 VCWRQLSRVLVAANSQG--IIKIYVIPIR 219 (221)
Q Consensus 193 ~~~~~~~~~l~~~~~dg--~i~iw~~~~~ 219 (221)
+.|+|||+++++++.++ .|.+|++.++
T Consensus 247 ~~~spdg~l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 247 AEWAPDGSLIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp EEECTTSCEEEEECTTSSCEEEEECTTTC
T ss_pred eEECCCCeEEEEECCCCCeEEEEEECCCC
Confidence 99999999888888888 6666666454
No 174
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=5e-16 Score=113.65 Aligned_cols=150 Identities=10% Similarity=0.036 Sum_probs=111.7
Q ss_pred CCCceEEEEeCC------------CeEEEEEecCC--ceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCc
Q psy10662 1 MNSCHLAFGSAD------------HCVHYYDLRNT--KEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN 66 (221)
Q Consensus 1 ~~~~~l~~~~~d------------g~i~i~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~ 66 (221)
|||++|++++.+ +.|.+||+.+. .+.+..+. +...+.+++|+|++.+++++. .|.+||+.+++
T Consensus 101 pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~l~~~~~--~i~~~d~~~~~ 177 (349)
T 1jmx_B 101 PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLYVAGP--DIYKMDVKTGK 177 (349)
T ss_dssp TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEEEESS--SEEEECTTTCC
T ss_pred CCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCcEEEccC--cEEEEeCCCCc
Confidence 688899988865 89999999731 23334444 445689999998766666543 49999998887
Q ss_pred cceeeeccc--------------------------------------------------------------------cce
Q psy10662 67 CLRSFVGHI--------------------------------------------------------------------NDK 78 (221)
Q Consensus 67 ~~~~~~~~~--------------------------------------------------------------------~~v 78 (221)
.+..+..+. ..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (349)
T 1jmx_B 178 YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELY 257 (349)
T ss_dssp EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcc
Confidence 665543221 134
Q ss_pred eEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662 79 NFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157 (221)
Q Consensus 79 ~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 157 (221)
..++|+| ++++++++ ++.|.+||+.+++.+..+ .....+..++|+|++++|++++.++.|.+|
T Consensus 258 ~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~--------------~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~ 321 (349)
T 1jmx_B 258 FTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAA--------------NLDHTYYCVAFDKKGDKLYLGGTFNDLAVF 321 (349)
T ss_dssp EEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEE--------------ECSSCCCEEEECSSSSCEEEESBSSEEEEE
T ss_pred eeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEE--------------cCCCCccceEECCCCCEEEEecCCCeEEEE
Confidence 5667789 99988887 889999999998876654 123346789999999988888889999999
Q ss_pred EcCCCCceeeee
Q psy10662 158 YKGLSKHMHAYR 169 (221)
Q Consensus 158 d~~~~~~~~~~~ 169 (221)
|+.+.+.+..+.
T Consensus 322 d~~~~~~~~~~~ 333 (349)
T 1jmx_B 322 NPDTLEKVKNIK 333 (349)
T ss_dssp ETTTTEEEEEEE
T ss_pred eccccceeeeee
Confidence 998887766654
No 175
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.73 E-value=8.1e-16 Score=113.30 Aligned_cols=172 Identities=8% Similarity=-0.027 Sum_probs=123.8
Q ss_pred CCceEEEEeCCCeEEEEEecCCc----------eeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTK----------EALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF 71 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~ 71 (221)
...++++|+.+ .+.+|++..-. ++.... .+.. |+.++| ++..|+++ .++.|++||+++.......
T Consensus 48 ~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~ 122 (388)
T 1xip_A 48 SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTV 122 (388)
T ss_dssp TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEE
T ss_pred CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCcc
Confidence 46778888887 45669876221 122233 3666 999999 76777777 8899999999887665566
Q ss_pred eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC
Q psy10662 72 VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN 151 (221)
Q Consensus 72 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 151 (221)
..|..++.++.+.+. .++++..||.|.+||+..++.. .+...|++++|+|+| ++.|..|
T Consensus 123 ~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~-----------------~~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 123 TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK-----------------QLAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE-----------------EEEESEEEEEECSSE--EEEEETT
T ss_pred ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc-----------------cccCCceEEEEcCCc--eEEEEcC
Confidence 667778888777654 3888899999999999876642 134579999999999 6788999
Q ss_pred CeEEEEEcCCCCc--eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662 152 NSLYIYYKGLSKH--MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA 205 (221)
Q Consensus 152 ~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 205 (221)
|.+++|+...... ...+...+ .+....+|...|.+++|.+++.++++-
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp------~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPS------ELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCH------HHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred CcEEEEcCCCccccccceecCCc------ccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999998766553 22331100 001111367889999999999998873
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=3e-14 Score=103.84 Aligned_cols=195 Identities=12% Similarity=0.067 Sum_probs=129.8
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEec-CC----CcEEEEEcCCCccceeee--c
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAS-TD----SQLKLWNINKPNCLRSFV--G 73 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~-~d----~~v~~wd~~~~~~~~~~~--~ 73 (221)
|++++++++..++.|.+||.. +++.......+...+.++++++++.++.+. .+ +.|.+||..+++....+. .
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 132 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPE-TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS 132 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTT-TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS
T ss_pred CCCCEEEEECCCCEEEEEeCC-CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc
Confidence 577877788889999999987 455444443466789999999876655544 44 589999988776543332 2
Q ss_pred cccceeEEEEeCCCCEEEEecC------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-E
Q psy10662 74 HINDKNFVGLATDGDYVACGSE------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-A 146 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~ 146 (221)
+...+..++++|+++++++... .+.|..+|..+++... +......+..++|+|+++.+ +
T Consensus 133 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~--------------~~~~~~~~~~i~~~~dg~~l~v 198 (333)
T 2dg1_A 133 TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP--------------IIQNISVANGIALSTDEKVLWV 198 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE--------------EEEEESSEEEEEECTTSSEEEE
T ss_pred cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE--------------eecCCCcccceEECCCCCEEEE
Confidence 3456899999999988776654 3556666655433321 12233457889999999855 4
Q ss_pred EecCCCeEEEEEcCC-CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 147 CGSENNSLYIYYKGL-SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 147 ~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
+.+.++.|.+||+.+ +.....+... .. ....++ ..+..++++++|+++++...++.|.+|+...
T Consensus 199 ~~~~~~~i~~~d~~~~g~~~~~~~~~----~~---~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 199 TETTANRLHRIALEDDGVTIQPFGAT----IP---YYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp EEGGGTEEEEEEECTTSSSEEEEEEE----EE---EECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred EeCCCCeEEEEEecCCCcCcccccce----EE---EecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCC
Confidence 455678999999864 3322221100 00 001112 3567899999999888877788999999753
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.72 E-value=4.1e-16 Score=115.90 Aligned_cols=193 Identities=9% Similarity=-0.003 Sum_probs=126.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEE--ecCCcEEE-----------------------ecCCC
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKF--LNKEDIVS-----------------------ASTDS 55 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~l~s-----------------------~~~d~ 55 (221)
|||+.|+.++.++.|++||+. +++.......+...+....| +|++.++. ...+.
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLA-TLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETT-TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred CCCCEEEEEeCCCeEEEEECC-CCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 789999999999999999998 66655566656665655554 56655443 23457
Q ss_pred cEEEEEcCCCccceeeeccccceeEEEEeC-CCCEEEEecCC------CeEEEEECCCCeeeEEEEeecccceeEeeEEE
Q psy10662 56 QLKLWNINKPNCLRSFVGHINDKNFVGLAT-DGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG 128 (221)
Q Consensus 56 ~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (221)
.|.+||+.+++... +..+...+..+.|+| +++.++....+ ..|.++|...++... +..
T Consensus 169 ~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~--------------l~~ 233 (388)
T 3pe7_A 169 RLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK--------------VKT 233 (388)
T ss_dssp EEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE--------------SCC
T ss_pred eEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE--------------eee
Confidence 89999998886543 445667789999999 99988766543 367778876543321 122
Q ss_pred ee--CceEEEEEecCCCEEEEecC-C----CeEEEEEcCCCCceeeeeeecccccccccccccccc-cceeEEEEcCCCc
Q psy10662 129 HI--NDKNFVGLATDGDYVACGSE-N----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN-EFVSAVCWRQLSR 200 (221)
Q Consensus 129 ~~--~~v~~~~~~~~~~~l~~~~~-d----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 200 (221)
+. ..+...+|+|+|+.|+..+. + ..|++||+.+++......+... .+. .....+.|+|||+
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~-----------~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 234 HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPAC-----------SHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCE-----------EEEEECTTSSEEEEEEC
T ss_pred CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCc-----------eeeeecCCCCeEccCCC
Confidence 22 24667889999997765443 2 2399999988765332221100 000 0012247999999
Q ss_pred EEEEe---------cCCCeEEEEECCccc
Q psy10662 201 VLVAA---------NSQGIIKIYVIPIRV 220 (221)
Q Consensus 201 ~l~~~---------~~dg~i~iw~~~~~~ 220 (221)
.|+.. ..+..|.+||+.+++
T Consensus 303 ~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 303 DAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp CC------------CCCCEEEEEETTTTE
T ss_pred cceeEeeeccccccCCCCEEEEEeccCCc
Confidence 88754 456799999998765
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=1.1e-14 Score=104.60 Aligned_cols=184 Identities=10% Similarity=0.007 Sum_probs=124.2
Q ss_pred CCCc-eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEec-CCCcEEEEEcCCCccceeeecc----
Q psy10662 1 MNSC-HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAS-TDSQLKLWNINKPNCLRSFVGH---- 74 (221)
Q Consensus 1 ~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~-~d~~v~~wd~~~~~~~~~~~~~---- 74 (221)
|+++ +++++..++.|..|+.. ++ ...+..+...+.++++++++.++.+. .++.|.+||..+++........
T Consensus 37 ~~g~~l~~~~~~~~~i~~~~~~-~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 113 (296)
T 3e5z_A 37 PARSAVIFSDVRQNRTWAWSDD-GQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKK 113 (296)
T ss_dssp GGGTEEEEEEGGGTEEEEEETT-SC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEE
T ss_pred CCCCEEEEEeCCCCEEEEEECC-CC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCC
Confidence 4676 78888889999999987 44 56666677889999999876655544 4689999999777654332211
Q ss_pred ccceeEEEEeCCCCEEEE----ec-------------CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662 75 INDKNFVGLATDGDYVAC----GS-------------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG 137 (221)
Q Consensus 75 ~~~v~~~~~~~~~~~l~~----~~-------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 137 (221)
...+..++++|+|+++++ ++ ..+.|..++.. ++. .. +..+...+..++
T Consensus 114 ~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~-------------~~~~~~~~~gi~ 178 (296)
T 3e5z_A 114 LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SA-------------PIRDRVKPNGLA 178 (296)
T ss_dssp CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EE-------------EECCCSSEEEEE
T ss_pred CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EE-------------eecCCCCCccEE
Confidence 234678999999998887 33 13355555544 322 11 233445678899
Q ss_pred EecCCCEEEEecCCCeEEEEEcC-CCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662 138 LATDGDYVACGSENNSLYIYYKG-LSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV 215 (221)
Q Consensus 138 ~~~~~~~l~~~~~d~~i~~~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~ 215 (221)
|+|+++.+++.+.++.|.+|++. .+.. .....+ . .+...+..++++++|+++++. ++.|.+|+
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~------------~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T------------VEPGKTDGLRVDAGGLIWASA--GDGVHVLT 243 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C------------CSSSCCCSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e------------CCCCCCCeEEECCCCCEEEEc--CCeEEEEC
Confidence 99999988777888999999987 3332 111111 0 123345678888888866665 67788888
Q ss_pred CC
Q psy10662 216 IP 217 (221)
Q Consensus 216 ~~ 217 (221)
..
T Consensus 244 ~~ 245 (296)
T 3e5z_A 244 PD 245 (296)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.70 E-value=2.1e-16 Score=117.61 Aligned_cols=190 Identities=8% Similarity=-0.045 Sum_probs=122.6
Q ss_pred CCCceEEEEeCC---CeEEEEEecCCceeeEEEEeccCce-EEEEEecCC-cEEEecCCCcEEEEEcCCCccceeeeccc
Q psy10662 1 MNSCHLAFGSAD---HCVHYYDLRNTKEALAVFKGHRKAV-SYVKFLNKE-DIVSASTDSQLKLWNINKPNCLRSFVGHI 75 (221)
Q Consensus 1 ~~~~~l~~~~~d---g~i~i~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~-~l~s~~~d~~v~~wd~~~~~~~~~~~~~~ 75 (221)
|||++|+..... ..|.+||+. +++... +..+.... ..+.|+|++ .|+.++.++.|++||+.+++.......+.
T Consensus 45 pdG~~l~~~~~~~g~~~l~~~d~~-~~~~~~-l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~ 122 (396)
T 3c5m_A 45 QDGKKLLFAGDFDGNRNYYLLNLE-TQQAVQ-LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDE 122 (396)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETT-TTEEEE-CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT
T ss_pred CCCCEEEEEEecCCCceEEEEECC-CCcEEE-eecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEeccc
Confidence 689988877543 368888887 555433 33333333 347899865 57788888899999998877654444333
Q ss_pred cceeE-------------------EEEeCCCCEEEEe-----cCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC
Q psy10662 76 NDKNF-------------------VGLATDGDYVACG-----SENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN 131 (221)
Q Consensus 76 ~~v~~-------------------~~~~~~~~~l~~~-----~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (221)
..... ..|+|+++.++.. ..+..|.+||+.+++.... ..+..
T Consensus 123 ~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~--------------~~~~~ 188 (396)
T 3c5m_A 123 EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI--------------HQDTA 188 (396)
T ss_dssp TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE--------------EEESS
T ss_pred ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEee--------------ccCCc
Confidence 32222 3457777765544 3566899999887765322 24556
Q ss_pred ceEEEEEec-CCCEEEEecCC------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE
Q psy10662 132 DKNFVGLAT-DGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA 204 (221)
Q Consensus 132 ~v~~~~~~~-~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 204 (221)
.+..+.|+| +++.|+..+.+ ..|.+||+..++..... . ......+..++|+|+|++|+.
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-------------~-~~~~~~~~~~~~spdg~~l~~ 254 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIK-------------E-HAEGESCTHEFWIPDGSAMAY 254 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESS-------------C-CCTTEEEEEEEECTTSSCEEE
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEee-------------c-cCCCccccceEECCCCCEEEE
Confidence 788899999 78877665543 35778887544321110 0 011235778999999998877
Q ss_pred ecCC-----CeEEEEECCccc
Q psy10662 205 ANSQ-----GIIKIYVIPIRV 220 (221)
Q Consensus 205 ~~~d-----g~i~iw~~~~~~ 220 (221)
++.+ +.|++||+.+++
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 255 VSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp EEEETTTCCEEEEEECTTTCC
T ss_pred EecCCCCccceEEEEECCCCC
Confidence 7543 459999998764
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=6.2e-15 Score=104.28 Aligned_cols=189 Identities=9% Similarity=-0.022 Sum_probs=130.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEE-eccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCccceeeeccccce
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK-GHRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDK 78 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v 78 (221)
|+++++++.. ++.|.+||.. ... ...+. .....+..+++.+++.++ +...++.|.+|+..+.............+
T Consensus 76 ~~g~l~v~~~-~~~i~~~d~~-~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p 152 (270)
T 1rwi_B 76 GAGTVYVTDF-NNRVVTLAAG-SNN-QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDP 152 (270)
T ss_dssp TTCCEEEEET-TTEEEEECTT-CSC-CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSC
T ss_pred CCCCEEEEcC-CCEEEEEeCC-Cce-EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCc
Confidence 4567555554 8899999976 332 22232 223568999999766554 44567899999765544332222233457
Q ss_pred eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662 79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY 158 (221)
Q Consensus 79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 158 (221)
..++++|+++++++...++.|.+||......... .......+..++++++|.++++...++.|.+|+
T Consensus 153 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~-------------~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL-------------PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp CCEEECTTCCEEEEEGGGTEEEEECTTTCCEEEC-------------CCSSCCSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred eeEEEeCCCCEEEEECCCCEEEEEecCCCceEee-------------cccCCCCceEEEECCCCCEEEEECCCCcEEEEc
Confidence 8899999999878777788999999876543221 011225678899999998888777788999998
Q ss_pred cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
........ . ...+...+.+++++++|+++++...++.|+++++...+
T Consensus 220 ~~~~~~~~-~--------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 220 AGSTTSTV-L--------------PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp TTCSCCEE-C--------------CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCCCccee-e--------------ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 76543211 0 00122457899999999988888899999999998754
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=5.3e-15 Score=108.33 Aligned_cols=176 Identities=15% Similarity=0.144 Sum_probs=113.1
Q ss_pred CCCceEEEEeCC---C--eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecC---------------------
Q psy10662 1 MNSCHLAFGSAD---H--CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAST--------------------- 53 (221)
Q Consensus 1 ~~~~~l~~~~~d---g--~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~--------------------- 53 (221)
|||+.|+.++.+ + .|.+|++. +++...... +.. +..++|+|++ .|+.++.
T Consensus 68 pDg~~la~~~~~~~~~~~~l~~~~~~-~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (347)
T 2gop_A 68 PDGKKIAFMRANEEKKVSEIWVADLE-TLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDL 144 (347)
T ss_dssp TTSSEEEEEEEETTTTEEEEEEEETT-TTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC----
T ss_pred CCCCEEEEEEeccCCCcceEEEEECC-CCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCc
Confidence 789999887754 3 47777876 555544444 334 9999999865 4666543
Q ss_pred ------CCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCC-------eEEEEECCCCeeeEEEEeecccc
Q psy10662 54 ------DSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENN-------SLYIYYKGLSKHMHAYRFDTVRS 120 (221)
Q Consensus 54 ------d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~v~iwd~~~~~~~~~~~~~~~~~ 120 (221)
...|.+||+.+++.+..+.. . .+..+.|+|+| +++++..+. ...+|.+.+++. ..
T Consensus 145 ~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~-------- 212 (347)
T 2gop_A 145 GFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EK-------- 212 (347)
T ss_dssp -----CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EE--------
T ss_pred ccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EE--------
Confidence 25799999988876455544 4 78899999999 777775432 334443333332 11
Q ss_pred eeEeeEEEeeCceEEEEEecCCCEEEEecCC--------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeE
Q psy10662 121 MLESSFVGHINDKNFVGLATDGDYVACGSEN--------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSA 192 (221)
Q Consensus 121 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 192 (221)
+..+ ..+..+ +|+|+.|+.++.+ ..|.+|| +++... + ...+...+..
T Consensus 213 -----l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~-l--------------~~~~~~~~~~ 267 (347)
T 2gop_A 213 -----MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG-I--------------LDEVDRGVGQ 267 (347)
T ss_dssp -----EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE-S--------------STTCCSEEEE
T ss_pred -----eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEe-c--------------cccCCcccCC
Confidence 1222 334333 9999988877644 3677777 332211 1 1134456775
Q ss_pred -EEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 193 -VCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 193 -~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
+.|+ ++ ++++++.++.+++| +.++
T Consensus 268 ~~~~s-dg-~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 268 AKIKD-GK-VYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp EEEET-TE-EEEEEEETTEEEEE-EESS
T ss_pred ccEEc-Cc-EEEEEecCCcEEEE-EcCC
Confidence 8899 88 88888889999999 7643
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.69 E-value=1.6e-14 Score=115.52 Aligned_cols=203 Identities=12% Similarity=0.041 Sum_probs=130.9
Q ss_pred CCCceEEEEeCCC-----eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCCc----------------EE
Q psy10662 1 MNSCHLAFGSADH-----CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDSQ----------------LK 58 (221)
Q Consensus 1 ~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~~----------------v~ 58 (221)
|||++||.+..++ .|++||+. +++.......+ ..+..++|+|++ .|+.++.++. |+
T Consensus 134 PDg~~la~~~~~~G~~~~~i~v~d~~-tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (710)
T 2xdw_A 134 EDGEYFAYGLSASGSDWVTIKFMKVD-GAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLY 211 (710)
T ss_dssp TTSSEEEEEEEETTCSCEEEEEEETT-TTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECC-CCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEE
Confidence 7899999776644 89999998 66655432222 236789999864 5777776655 99
Q ss_pred EEEcCCCccc--eeee--ccccceeEEEEeCCCCEEEEecC-----CCeEEEEECCC------Ce-eeEEEE--------
Q psy10662 59 LWNINKPNCL--RSFV--GHINDKNFVGLATDGDYVACGSE-----NNSLYIYYKGL------SK-HMHAYR-------- 114 (221)
Q Consensus 59 ~wd~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~iwd~~~------~~-~~~~~~-------- 114 (221)
+|++.+++.. ..+. .+...+..+.|+|+|++|+..+. +..|.+||+.+ ++ ....+.
T Consensus 212 ~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~ 291 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD 291 (710)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE
T ss_pred EEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE
Confidence 9999887632 2222 23455788999999998876654 56899999875 32 122221
Q ss_pred -e-----------------------ecccce--eEeeEEEeeC--ceEEEEEecCCCEEEEecCCCe--EEEEEcCCCCc
Q psy10662 115 -F-----------------------DTVRSM--LESSFVGHIN--DKNFVGLATDGDYVACGSENNS--LYIYYKGLSKH 164 (221)
Q Consensus 115 -~-----------------------~~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~--i~~~d~~~~~~ 164 (221)
+ +..... ....+..+.. .+..++|++++.++++...++. |.+|++.+++.
T Consensus 292 ~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~ 371 (710)
T 2xdw_A 292 YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGAL 371 (710)
T ss_dssp EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCE
T ss_pred EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCE
Confidence 0 111110 0122223323 5677888888888888888885 55566655554
Q ss_pred eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-c---CCCeEEEEECCccc
Q psy10662 165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-N---SQGIIKIYVIPIRV 220 (221)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~dg~i~iw~~~~~~ 220 (221)
...+. .+...+..++++|+++.++.. + ..+.|..||+.+++
T Consensus 372 ~~~l~---------------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 372 LKIFP---------------LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEC---------------CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEecC---------------CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 33332 234567889999998766532 2 36799999998765
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.69 E-value=2.2e-14 Score=104.45 Aligned_cols=189 Identities=9% Similarity=-0.040 Sum_probs=131.8
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEecc-----CceEEEEEecCCcEEEec--CCCcEEEEEcCCCccceeeec
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHR-----KAVSYVKFLNKEDIVSAS--TDSQLKLWNINKPNCLRSFVG 73 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~l~s~~--~d~~v~~wd~~~~~~~~~~~~ 73 (221)
|+++++++...++.|.+||.. +++....+.... .....+++ +++.++.+. .++.|.++|+.+++.+..+..
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~-t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPK-TYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETT-TTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEECCCCeEEEEECC-CCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 356444444478999999998 677776666433 14567777 556655554 489999999999888777654
Q ss_pred cccceeEEEEeCCCCEEEEecCC----------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662 74 HINDKNFVGLATDGDYVACGSEN----------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD 143 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~~d----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 143 (221)
. .....+.++|+|++++++..+ +.|.++|..+++....+.. .....+..++|+|+++
T Consensus 171 g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~------------~~g~~p~~la~~~d~~ 237 (328)
T 3dsm_A 171 G-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF------------KLGDWPSEVQLNGTRD 237 (328)
T ss_dssp S-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC------------CTTCCCEEEEECTTSC
T ss_pred C-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec------------CCCCCceeEEEecCCC
Confidence 3 345788999999977777654 7899999998876654311 1123578899999999
Q ss_pred EEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEe----cCCCeEEEEECCc
Q psy10662 144 YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAA----NSQGIIKIYVIPI 218 (221)
Q Consensus 144 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~----~~dg~i~iw~~~~ 218 (221)
.++++.. .|.+||..+++..... ...........++++| +++++++. ..++.|.+|+..
T Consensus 238 ~lyv~~~--~v~~~d~~t~~~~~~~-------------~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~- 301 (328)
T 3dsm_A 238 TLYWINN--DIWRMPVEADRVPVRP-------------FLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ- 301 (328)
T ss_dssp EEEEESS--SEEEEETTCSSCCSSC-------------SBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-
T ss_pred EEEEEcc--EEEEEECCCCceeeee-------------eecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-
Confidence 8887765 8999998776542100 0001134578899999 55666665 578999999987
Q ss_pred cc
Q psy10662 219 RV 220 (221)
Q Consensus 219 ~~ 220 (221)
++
T Consensus 302 g~ 303 (328)
T 3dsm_A 302 GK 303 (328)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=6.2e-15 Score=104.25 Aligned_cols=190 Identities=8% Similarity=-0.036 Sum_probs=126.3
Q ss_pred CCCceEE-EEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 1 MNSCHLA-FGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 1 ~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
|++++++ +...++.|.+|+.. +.........+...+.++++.+++.++.+..++.|.+||................+.
T Consensus 33 ~~g~l~v~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~ 111 (270)
T 1rwi_B 33 SAGNVYVTSEGMYGRVVKLATG-STGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPE 111 (270)
T ss_dssp TTCCEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEE
T ss_pred CCCCEEEEccCCCCcEEEecCC-CcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCc
Confidence 4677666 44678899999875 322211112233567889999866666555588999999866543222112235688
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
.+++.|+++++++...++.|.+|+..+...... .......+..++++|+|+++++...++.|.+||.
T Consensus 112 ~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~-------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 112 GLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL-------------PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp EEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC-------------CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred ceEECCCCCEEEEECCCCEEEEEECCCceeEee-------------ccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 999999999888877788999997654432211 0112235678999999998887777889999997
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
......... ..+...+..++++++|.++++...++.|.+|+..+.
T Consensus 179 ~~~~~~~~~---------------~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 179 ESNNQVVLP---------------FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp TTCCEEECC---------------CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred CCCceEeec---------------ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 655432110 012245788999999988888778899999998754
No 185
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.68 E-value=1e-13 Score=107.59 Aligned_cols=199 Identities=9% Similarity=0.022 Sum_probs=140.8
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcC--CCccceeeecccccee
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNIN--KPNCLRSFVGHINDKN 79 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~--~~~~~~~~~~~~~~v~ 79 (221)
+.++++...++.|.++|.. +++.+..+.. ...+..+.|+|+ +++++++.|+.|.+||+. +.+.+..+.... ...
T Consensus 167 ~~~~V~~~~~~~V~viD~~-t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~ 243 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGS-TYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EAR 243 (567)
T ss_dssp GEEEEEETTTTEEEEEETT-TCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEE
T ss_pred ceEEEEeCCCCeEEEEECC-CCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCc
Confidence 4567777788999999998 7778877773 446779999985 457788899999999995 777777775433 457
Q ss_pred EEEEe----CCCCEEEEecC-CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC-ceEEEEEecCCC-EEEEecCCC
Q psy10662 80 FVGLA----TDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN-DKNFVGLATDGD-YVACGSENN 152 (221)
Q Consensus 80 ~~~~~----~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~-~l~~~~~d~ 152 (221)
.++|+ |+|++++++.. ++.|.++|..+.+.+..+...... ......|.. .+..+..++++. +++....+|
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~---~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT---YDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEEC---TTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccc---cccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 89999 69998776654 589999999999888776311000 000011222 566788888755 455566779
Q ss_pred eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCcccC
Q psy10662 153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRVL 221 (221)
Q Consensus 153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~l 221 (221)
.|.++|....+.+...... .......+.|+|+|++++++. .++.|.++|+.++++
T Consensus 321 ~v~~vd~~~~~~~~v~~i~--------------~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEIS--------------AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp EEEEEETTCSSEEEEEEEE--------------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred eEEEEecCCCccceeeeee--------------ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 9999998765533222111 122355788999999987665 588999999998764
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.68 E-value=2.2e-15 Score=112.14 Aligned_cols=186 Identities=11% Similarity=0.004 Sum_probs=122.8
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEE-------------------EEEecCCc-EEEe-----cCCC
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSY-------------------VKFLNKED-IVSA-----STDS 55 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~-l~s~-----~~d~ 55 (221)
|||+.|+.++.++.|++||+. +++.......+...... +.|+|++. ++.. ..+.
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~ 168 (396)
T 3c5m_A 90 TDERAFFYVKNELNLMKVDLE-TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTC 168 (396)
T ss_dssp TTSSEEEEEETTTEEEEEETT-TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCE
T ss_pred CCCCEEEEEEcCCcEEEEECC-CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcc
Confidence 789999999999999999997 55554444434432222 23455433 3322 4567
Q ss_pred cEEEEEcCCCccceeeeccccceeEEEEeC-CCCEEEEecCC------CeEEEEECCCCeeeEEEEeecccceeEeeEEE
Q psy10662 56 QLKLWNINKPNCLRSFVGHINDKNFVGLAT-DGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVG 128 (221)
Q Consensus 56 ~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (221)
.|.+||+.+++..... .+...+..+.|+| +++.++..+.+ ..|.+||+..++.... ..
T Consensus 169 ~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l--------------~~ 233 (396)
T 3c5m_A 169 RLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKI--------------KE 233 (396)
T ss_dssp EEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEES--------------SC
T ss_pred eEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEe--------------ec
Confidence 8999999887765443 4667789999999 78766655433 3688888765442211 11
Q ss_pred e--eCceEEEEEecCCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCc
Q psy10662 129 H--INDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSR 200 (221)
Q Consensus 129 ~--~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 200 (221)
+ ...+..++|+|+|+.|+..+.+ +.|++||+.+++...... ..+ .. +.|+| +|+
T Consensus 234 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-------------~~~----~~-~~~s~~dg~ 295 (396)
T 3c5m_A 234 HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-------------MPP----CS-HLMSNFDGS 295 (396)
T ss_dssp CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-------------CCS----EE-EEEECSSSS
T ss_pred cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-------------CCC----CC-CCccCCCCc
Confidence 1 2246778999999987766543 459999988765432211 001 22 88999 999
Q ss_pred EEEEec----------------CCCeEEEEECCccc
Q psy10662 201 VLVAAN----------------SQGIIKIYVIPIRV 220 (221)
Q Consensus 201 ~l~~~~----------------~dg~i~iw~~~~~~ 220 (221)
+++.++ .+..|.+||+.+++
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 888754 34789999998765
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=1.7e-14 Score=105.12 Aligned_cols=184 Identities=8% Similarity=0.059 Sum_probs=125.7
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDKNFV 81 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~ 81 (221)
+..++..+.++.++.|. .+....+..+...+.+++|++++.|+ ++..++.|.+||..+++.......+...+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i 92 (333)
T 2dg1_A 17 SNSAVPIISESELQTIT----AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAI 92 (333)
T ss_dssp GGCSSCCCCGGGSCEEE----CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEE
T ss_pred ccceeEEeecccCcccc----cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceE
Confidence 34455556677888882 33455666677788999999866655 67788999999998877654443456779999
Q ss_pred EEeCCCCEEEEecCC----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC------C
Q psy10662 82 GLATDGDYVACGSEN----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE------N 151 (221)
Q Consensus 82 ~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d 151 (221)
+++|+++++++...+ +.|.+||..+++....+. .......+..++++|+|+++++... .
T Consensus 93 ~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~-----------~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 93 KIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE-----------DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp EECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC-----------SSSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred EECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc-----------cCccCCcccceEECCCCCEEEEeccccccCCC
Confidence 999999988877666 689999987765432210 0012346888999999988776653 2
Q ss_pred CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEE-EecCCCeEEEEECC
Q psy10662 152 NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV-AANSQGIIKIYVIP 217 (221)
Q Consensus 152 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~ 217 (221)
+.|..+|...++... +. .....+..++|+|+|+.|+ +.+.++.|.+|++.
T Consensus 162 ~~l~~~~~~~~~~~~-~~---------------~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTP-II---------------QNISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEEEECTTSCCEEE-EE---------------EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ceEEEEeCCCCEEEE-ee---------------cCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 456556554333221 10 1122467899999998664 45568899999985
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=1.7e-13 Score=98.32 Aligned_cols=187 Identities=10% Similarity=0.039 Sum_probs=121.8
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEec----cCceEEEEEecCCcEEE-----ec-------------CCCcEE
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH----RKAVSYVKFLNKEDIVS-----AS-------------TDSQLK 58 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~l~s-----~~-------------~d~~v~ 58 (221)
|+|+++++...++.|.+||.. +++........ ...+..++++|++.++. ++ ..+.|.
T Consensus 78 ~dg~l~v~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~ 156 (296)
T 3e5z_A 78 KQGHLIACSHGLRRLERQREP-GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVF 156 (296)
T ss_dssp TTCCEEEEETTTTEEEEECST-TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEE
T ss_pred CCCcEEEEecCCCeEEEEcCC-CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEE
Confidence 577877777677899999986 44433322221 23467899998766555 33 124555
Q ss_pred EEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECC-CCee-eEEEEeecccceeEeeEEEeeCceEEE
Q psy10662 59 LWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG-LSKH-MHAYRFDTVRSMLESSFVGHINDKNFV 136 (221)
Q Consensus 59 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~ 136 (221)
.++.. ++ ...+..+......++|+|+++.+++.+.++.|.+||+. .++. .... .+..+...+..+
T Consensus 157 ~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~-----------~~~~~~~~p~~i 223 (296)
T 3e5z_A 157 RLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGV-----------HFTVEPGKTDGL 223 (296)
T ss_dssp EECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEE-----------EECCSSSCCCSE
T ss_pred EECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCe-----------EeeCCCCCCCeE
Confidence 55544 33 33344455667899999999988878888999999986 3432 1110 011133456679
Q ss_pred EEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEE-cCCCcEEEEecCCCeEEEEE
Q psy10662 137 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW-RQLSRVLVAANSQGIIKIYV 215 (221)
Q Consensus 137 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~iw~ 215 (221)
+++++|+++++. ++.|.+||.. ++.+..+. .+.. +.+++| +|+++.|++++.++ +.-++
T Consensus 224 ~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~---------------~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~ 283 (296)
T 3e5z_A 224 RVDAGGLIWASA--GDGVHVLTPD-GDELGRVL---------------TPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIE 283 (296)
T ss_dssp EEBTTSCEEEEE--TTEEEEECTT-SCEEEEEE---------------CSSC-CCEEEEESTTSCEEEEEETTE-EEEEE
T ss_pred EECCCCCEEEEc--CCeEEEECCC-CCEEEEEE---------------CCCC-ceeEEEECCCCCEEEEEcCCe-EEEEE
Confidence 999999876666 7889999975 54444332 2333 788999 58999898887764 55566
Q ss_pred CCcccC
Q psy10662 216 IPIRVL 221 (221)
Q Consensus 216 ~~~~~l 221 (221)
..+++|
T Consensus 284 ~~~~~~ 289 (296)
T 3e5z_A 284 TNVRGL 289 (296)
T ss_dssp CSCCBC
T ss_pred cccccc
Confidence 666553
No 189
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.62 E-value=2.4e-12 Score=95.25 Aligned_cols=108 Identities=5% Similarity=-0.150 Sum_probs=78.6
Q ss_pred CCCceEEEEeC--CC---eEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEec----------CCCcEEEEEcCC
Q psy10662 1 MNSCHLAFGSA--DH---CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAS----------TDSQLKLWNINK 64 (221)
Q Consensus 1 ~~~~~l~~~~~--dg---~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~----------~d~~v~~wd~~~ 64 (221)
|+++++.+... .+ .|.+||.. +++.+..+.....+ .++++|++. ++.+. .++.|.+||..+
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~-t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAG-SGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECC-CCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 46666666653 22 88999998 67777777654444 999998654 55553 367899999998
Q ss_pred Cccceeeecc-------ccceeEEEEeCCCCEEEEecC--CCeEEEEECCCCeeeEE
Q psy10662 65 PNCLRSFVGH-------INDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHA 112 (221)
Q Consensus 65 ~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~ 112 (221)
.+.+..+... ......+.|+|+|++++++.. ++.|.++| .+++.+..
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 8877765422 123458999999999887763 57899999 99888777
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=5.8e-14 Score=99.72 Aligned_cols=152 Identities=9% Similarity=0.028 Sum_probs=116.1
Q ss_pred ecCCcEEEecCCCcEEEEEcCCCccceeeeccc-cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccce
Q psy10662 43 LNKEDIVSASTDSQLKLWNINKPNCLRSFVGHI-NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSM 121 (221)
Q Consensus 43 ~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 121 (221)
+|++.|++++.++.|.+||.++++.+..+..+. ..+.++.+.|+|++++ +.++.|..||. +++.+..+..
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~------ 73 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA------ 73 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC------
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC------
Confidence 477889999999999999999999998887665 4689999999999888 34678999998 7887766521
Q ss_pred eEeeEEEeeCceEEEEEecCCCEEEEecC-CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc
Q psy10662 122 LESSFVGHINDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR 200 (221)
Q Consensus 122 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 200 (221)
+....+.++.+.|+|+++++.+. ++.+..+|. +++.+..+...... ..+......+++.++|+
T Consensus 74 ------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~---------~~~~~~~~~v~~~~~G~ 137 (276)
T 3no2_A 74 ------PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGI---------ERPHAQFRQINKNKKGN 137 (276)
T ss_dssp ------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSC---------SSGGGSCSCCEECTTSC
T ss_pred ------CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCC---------CcccccccCceECCCCC
Confidence 11235678889999999998877 778888875 66666555432210 11222345667899999
Q ss_pred EEEEecCCCeEEEEECCccc
Q psy10662 201 VLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 201 ~l~~~~~dg~i~iw~~~~~~ 220 (221)
++++...++.|..||.. |+
T Consensus 138 ~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 138 YLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEETTTTEEEEECTT-SC
T ss_pred EEEEecCCCEEEEECCC-CC
Confidence 99999999999999987 54
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.62 E-value=8.7e-14 Score=102.63 Aligned_cols=69 Identities=7% Similarity=0.004 Sum_probs=50.5
Q ss_pred CCCceEEEEe----------CCCeEEEEEecCCceeeEEEEec------cCceEEEEEecCC-cEEEecC--CCcEEEEE
Q psy10662 1 MNSCHLAFGS----------ADHCVHYYDLRNTKEALAVFKGH------RKAVSYVKFLNKE-DIVSAST--DSQLKLWN 61 (221)
Q Consensus 1 ~~~~~l~~~~----------~dg~i~i~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~-~l~s~~~--d~~v~~wd 61 (221)
||+++|+++. .++.|.+||.. +.+.+..+... ......++++|++ +|+++.. ++.|.+||
T Consensus 59 pdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~-t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d 137 (361)
T 2oiz_A 59 NDGKKIYTMTTYHERITRGKRSDVVEVWDAD-KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVD 137 (361)
T ss_dssp TTSSEEEEEEEEETTSSSSCEEEEEEEEETT-TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEE
T ss_pred CCCCEEEEEEecccccccCCCCCEEEEEECc-CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEE
Confidence 6888888886 36789999987 67777777643 2456788999865 4665543 68899999
Q ss_pred cCCCcccee
Q psy10662 62 INKPNCLRS 70 (221)
Q Consensus 62 ~~~~~~~~~ 70 (221)
+.+++.+..
T Consensus 138 ~~~~~~~~~ 146 (361)
T 2oiz_A 138 VAKGDYVED 146 (361)
T ss_dssp TTTTEEEEE
T ss_pred CCCCcEEEE
Confidence 987766554
No 192
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.60 E-value=4.7e-16 Score=115.01 Aligned_cols=181 Identities=11% Similarity=0.023 Sum_probs=104.0
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCccceeeecccc-cee
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNCLRSFVGHIN-DKN 79 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~-~v~ 79 (221)
++..+++++.||.|+.||.. +++.+..+.. +.+.+..+.++ ..+++++.|+.|+.||.++++.+.....+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~-tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKR-TGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETT-TCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECC-CCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 56789999999999999998 7888887775 45554444444 4677778999999999998887655533211 111
Q ss_pred E-EEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662 80 F-VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY 158 (221)
Q Consensus 80 ~-~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 158 (221)
+ ..+. .+..+++++.++.+..||.++++.+..+. .+. ...++|++..+++++.++.|+.||
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~-------------~~~----~~~~~p~~~~v~~~~~dg~v~a~d 146 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLS-------------SAF----ADSLSPSTSLLYLGRTEYTITMYD 146 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC---------------------------------------EEEEEEEEEEECCC
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEec-------------CCC----cccccccCCEEEEEecCCEEEEEE
Confidence 1 1111 34567888889999999999998876541 111 134466888899999999999999
Q ss_pred cCCCCceeeeeeecccccccccccccccccceeEEEEcCCC---cEEEEecCCCeEEEEECCccc
Q psy10662 159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS---RVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.++++.+-.+.... ....+++++. ..+++++.||.|+.||..+|+
T Consensus 147 ~~tG~~~W~~~~~~-----------------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 147 TKTRELRWNATYFD-----------------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp SSSSSCCCEEEEEE-----------------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred CCCCCEEEeEeccc-----------------ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 99988765544211 1112223321 456677889999999998875
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=1.8e-12 Score=93.52 Aligned_cols=192 Identities=11% Similarity=0.044 Sum_probs=125.8
Q ss_pred CCCceEEE-------EeCCCeEEEEEecCCceeeEEEEe-----ccCceEEEEEecC-CcEEEecCCCcEEEEEcCCCcc
Q psy10662 1 MNSCHLAF-------GSADHCVHYYDLRNTKEALAVFKG-----HRKAVSYVKFLNK-EDIVSASTDSQLKLWNINKPNC 67 (221)
Q Consensus 1 ~~~~~l~~-------~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~-~~l~s~~~d~~v~~wd~~~~~~ 67 (221)
++++++++ +..++.|.+||.. +++.. .+.. +...+.+++++++ +.++.++..+.|.+||.. ++.
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~-~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~ 103 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLK-TGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTF 103 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTT-TCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCE
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCC-CCcEE-EEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCE
Confidence 46777777 5778899999976 44432 2322 4467899999987 777766666689999987 654
Q ss_pred cee-eec----cccceeEEEEeCCCCEEEEecCC---------------CeEEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662 68 LRS-FVG----HINDKNFVGLATDGDYVACGSEN---------------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFV 127 (221)
Q Consensus 68 ~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 127 (221)
... ... ....+..++++++++++++...+ +.|..+|.. ++... +.
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~--------------~~ 168 (314)
T 1pjx_A 104 EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ--------------VD 168 (314)
T ss_dssp EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE--------------EE
T ss_pred EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE--------------ec
Confidence 322 211 12357899999999887776654 567777654 33221 12
Q ss_pred EeeCceEEEEEe----cCCCEEEE-ecCCCeEEEEEcC-CCCceeeeeeecccccccccccccccc-cceeEEEEcCCCc
Q psy10662 128 GHINDKNFVGLA----TDGDYVAC-GSENNSLYIYYKG-LSKHMHAYRFDTVRSMLERDRNEDDTN-EFVSAVCWRQLSR 200 (221)
Q Consensus 128 ~~~~~v~~~~~~----~~~~~l~~-~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 200 (221)
.+......++++ |+++.+++ ...++.|.+||.. .+.......+ .....+. ..+..++++++|+
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~----------~~~~~~~~~~p~~i~~d~~G~ 238 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVW----------GHIPGTHEGGADGMDFDEDNN 238 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEE----------EECCCCSSCEEEEEEEBTTCC
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEE----------EECCCCCCCCCCceEECCCCC
Confidence 333456788999 99976544 4567899999976 2321110000 0111222 4567899999999
Q ss_pred EEEEecCCCeEEEEECCccc
Q psy10662 201 VLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 201 ~l~~~~~dg~i~iw~~~~~~ 220 (221)
++++...++.|.+|+..+++
T Consensus 239 l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 239 LLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp EEEEEETTTEEEEECTTCBS
T ss_pred EEEEEcCCCEEEEEcCCCCc
Confidence 88887778899999988554
No 194
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.59 E-value=7.7e-14 Score=102.85 Aligned_cols=143 Identities=12% Similarity=0.015 Sum_probs=104.4
Q ss_pred ceEEEEEec-CCcEEEecCCCcEEEEEcCCCc---------c-ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEEC
Q psy10662 36 AVSYVKFLN-KEDIVSASTDSQLKLWNINKPN---------C-LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 104 (221)
Q Consensus 36 ~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 104 (221)
++..+++++ .+.+++|+.+ .+++|++...+ . ......+.. |+.++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 688999997 4557777776 56669975433 1 112224566 999999 88899888 8899999998
Q ss_pred CCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccc
Q psy10662 105 GLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED 184 (221)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (221)
++...... ...+...+..+.+.+. .+++++.||.+.+||+..+....
T Consensus 114 ~sl~~~~~-------------~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~------------------ 160 (388)
T 1xip_A 114 EELSEFRT-------------VTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ------------------ 160 (388)
T ss_dssp SSTTCEEE-------------EEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE------------------
T ss_pred hhhhccCc-------------cceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc------------------
Confidence 76653322 2344556666666544 38888999999999998765431
Q ss_pred ccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 185 DTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 185 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
+...|++++|||+| ++.|..||.+++|+.+++
T Consensus 161 -~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 161 -LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp -EEESEEEEEECSSE--EEEEETTSCEEEEEEETT
T ss_pred -ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCc
Confidence 23479999999999 677889999999987654
No 195
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.59 E-value=1.8e-12 Score=95.34 Aligned_cols=111 Identities=7% Similarity=-0.058 Sum_probs=86.2
Q ss_pred CCCceEEEEeC-----CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEec----------CCCcEEEEEcCC
Q psy10662 1 MNSCHLAFGSA-----DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAS----------TDSQLKLWNINK 64 (221)
Q Consensus 1 ~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~----------~d~~v~~wd~~~ 64 (221)
|+++.+.+... ++.|.++|.. +.+.+..+.....+ . ++++|++. ++.+. .++.|.+||..+
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~-t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGE-AGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETT-TTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECC-CCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 67888887765 6799999998 78888888866665 4 99998554 55554 367899999999
Q ss_pred Cccceeeeccc-------cceeEEEEeCCCCEEEEecC--CCeEEEEECCCCeeeEEEE
Q psy10662 65 PNCLRSFVGHI-------NDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHAYR 114 (221)
Q Consensus 65 ~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~ 114 (221)
.+.+..+.-.. .....++|+|+|++++.+.. ++.|.++|+.+++.+.++.
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 99888774321 24567999999998877653 6899999999998887764
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.59 E-value=2.5e-13 Score=99.45 Aligned_cols=162 Identities=11% Similarity=0.062 Sum_probs=102.5
Q ss_pred CeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCC-------cEEEEEcCCCccceeeeccccceeEEEEeC
Q psy10662 13 HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDS-------QLKLWNINKPNCLRSFVGHINDKNFVGLAT 85 (221)
Q Consensus 13 g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~-------~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~ 85 (221)
..|++||+. +++.+..+.. . .+..+.|+|++.++++..++ ...+|.+.+++ ...+..+ ..+..+ +|
T Consensus 152 ~~l~~~d~~-~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--sp 224 (347)
T 2gop_A 152 TTFWIFDTE-SEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DS 224 (347)
T ss_dssp EEEEEEETT-TTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EE
T ss_pred ceEEEEECC-CCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CC
Confidence 578899987 5655355554 4 78899999877545554432 34555544443 3344434 444443 99
Q ss_pred CCCEEEEecCC--------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEE-EEEecCCCEEEEecCCCeEEE
Q psy10662 86 DGDYVACGSEN--------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF-VGLATDGDYVACGSENNSLYI 156 (221)
Q Consensus 86 ~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d~~i~~ 156 (221)
+|++++.++.+ ..|.+|| +++.. .+ ...+...+.. +.|+ ++ ++++++.++.+++
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~-~l------------~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l 287 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVM-GI------------LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNL 287 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE-ES------------STTCCSEEEEEEEET-TE-EEEEEEETTEEEE
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceE-ec------------cccCCcccCCccEEc-Cc-EEEEEecCCcEEE
Confidence 99988766643 3677777 33322 11 1233455665 8899 88 8899999999999
Q ss_pred EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE-EEEECC
Q psy10662 157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII-KIYVIP 217 (221)
Q Consensus 157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i-~iw~~~ 217 (221)
| +.+++..... .+...|.+++|+| .++++++.++.. .+|.+.
T Consensus 288 ~-~~~g~~~~~~----------------~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 288 Y-IWDGEIKPIA----------------KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp E-EESSSEEEEE----------------CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred E-EcCCceEEEe----------------cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 9 8743321111 2355788999999 677777666654 777664
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=2.6e-12 Score=91.93 Aligned_cols=185 Identities=7% Similarity=0.002 Sum_probs=126.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEecCCcEEEe-cCCCcEEEEEcCCCccceeee--ccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLNKEDIVSA-STDSQLKLWNINKPNCLRSFV--GHI 75 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~l~s~-~~d~~v~~wd~~~~~~~~~~~--~~~ 75 (221)
|+|+++++...++.|.+||.. ++ ...+. .+...+.++++.+++.+..+ ..++.|..||.. ++. ..+. ...
T Consensus 24 ~~g~l~v~~~~~~~v~~~d~~--~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~ 98 (299)
T 2z2n_A 24 DKGKVWITQHKANMISCINLD--GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPD 98 (299)
T ss_dssp TTSCEEEEETTTTEEEEECTT--CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTT
T ss_pred CCCCEEEEecCCCcEEEEcCC--CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcC
Confidence 467777766667899999876 22 22222 24567899999886665544 457889999976 332 2222 234
Q ss_pred cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662 76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY 155 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 155 (221)
..+..+++.|++.++++...++.|..||. +++... + ........+..+++++++++.++...++.|.
T Consensus 99 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~-----------~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 99 SAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-Y-----------ELPNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-E-----------ECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-e-----------cCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 56889999999988888777889999998 443321 1 0111234578899999998888777788999
Q ss_pred EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
.||. +++... +.. ......+..++++++|++.++...++.|..|+. ++
T Consensus 166 ~~~~-~g~~~~-~~~-------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 166 RITE-SGDITE-FKI-------------PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp EECT-TCCEEE-EEC-------------SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred EEcC-CCcEEE-eeC-------------CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence 9998 444321 110 012335778999999998777777889999988 44
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.58 E-value=1.1e-13 Score=110.38 Aligned_cols=185 Identities=10% Similarity=0.057 Sum_probs=118.7
Q ss_pred CCCceEE-----EEeCCCeEEEEEecCCceeeEEEEeccCce--EEEEEecCC-cEEEecCCCc-------------EEE
Q psy10662 1 MNSCHLA-----FGSADHCVHYYDLRNTKEALAVFKGHRKAV--SYVKFLNKE-DIVSASTDSQ-------------LKL 59 (221)
Q Consensus 1 ~~~~~l~-----~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~-~l~s~~~d~~-------------v~~ 59 (221)
|||++|| .|+.+..|++||+. +++.+. ..+...+ ..++|+|++ .|+.++.|.. |++
T Consensus 130 PDG~~la~~~~~~G~~~~~i~v~dl~-tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~ 206 (695)
T 2bkl_A 130 WDGKKVAFAQKPNAADEAVLHVIDVD-SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRY 206 (695)
T ss_dssp TTSSEEEEEEEETTCSCCEEEEEETT-TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEE
T ss_pred CCCCEEEEEECCCCCceEEEEEEECC-CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEE
Confidence 7899999 45556789999998 555431 1122222 688999865 4777777765 999
Q ss_pred EEcCCCcc----ceeeeccccceeEEEEeCCCCEEEEecCCC----eEEEEECCCCeeeEEEEeecccceeEeeEEEeeC
Q psy10662 60 WNINKPNC----LRSFVGHINDKNFVGLATDGDYVACGSENN----SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN 131 (221)
Q Consensus 60 wd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (221)
|++.+++. +.....+...+..+.|+|+|++++.++.++ .|.++|..+++.. . +..+..
T Consensus 207 ~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~-------------l~~~~~ 272 (695)
T 2bkl_A 207 HTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-L-------------LVKGVG 272 (695)
T ss_dssp EETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-E-------------EEECSS
T ss_pred EECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-E-------------eecCCC
Confidence 99988763 222233445788999999999887776555 5666665444322 1 233344
Q ss_pred ceEEEEEecCCCEEEEec---CCCeEEEEEcCCCCc--eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662 132 DKNFVGLATDGDYVACGS---ENNSLYIYYKGLSKH--MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN 206 (221)
Q Consensus 132 ~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 206 (221)
.+....+ ++|.+++... .++.|.+||+.++.. ...+. . ......+..++|+ ++.++++..
T Consensus 273 ~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~------------~-~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 273 AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV------------P-EDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEE------------C-CCSSCEEEEEEEE-TTEEEEEEE
T ss_pred ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEe------------c-CCCCCeEEEEEEE-CCEEEEEEE
Confidence 4455555 5666444443 257899999876542 11111 0 0113457788888 778888888
Q ss_pred CCCeEEEEECC
Q psy10662 207 SQGIIKIYVIP 217 (221)
Q Consensus 207 ~dg~i~iw~~~ 217 (221)
.|+..++|.+.
T Consensus 338 ~dg~~~l~~~~ 348 (695)
T 2bkl_A 338 KDATSEVRVAT 348 (695)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEe
Confidence 89988888654
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.57 E-value=2.2e-13 Score=108.69 Aligned_cols=191 Identities=8% Similarity=-0.012 Sum_probs=117.1
Q ss_pred CCCceEEEEeCCC---eEEEEEecC-CceeeEEEE------eccCceEEEEEecCCc-EE-----EecCCCcEEEEEcCC
Q psy10662 1 MNSCHLAFGSADH---CVHYYDLRN-TKEALAVFK------GHRKAVSYVKFLNKED-IV-----SASTDSQLKLWNINK 64 (221)
Q Consensus 1 ~~~~~l~~~~~dg---~i~i~~~~~-~~~~~~~~~------~~~~~i~~~~~~~~~~-l~-----s~~~d~~v~~wd~~~ 64 (221)
|+|.+++....++ .-.+|.... .+.....+. +|...+.+++|+|++. |+ .|+.+..|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 4677777666544 344554432 233222222 2344689999998765 44 344467899999999
Q ss_pred Cccceeeeccccce--eEEEEeCCCCEEEEecCCCe-------------EEEEECCCCeeeEEEEeecccceeEeeEEEe
Q psy10662 65 PNCLRSFVGHINDK--NFVGLATDGDYVACGSENNS-------------LYIYYKGLSKHMHAYRFDTVRSMLESSFVGH 129 (221)
Q Consensus 65 ~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~-------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (221)
++.+.. .+...+ ..++|+|+|+.|+.++.+.. |++|++.+++.... .+.....+
T Consensus 157 g~~~~~--~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~---------lv~~~~~~ 225 (695)
T 2bkl_A 157 GEWSKV--DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDT---------VVHERTGD 225 (695)
T ss_dssp CCBCSS--CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCE---------EEECCCCC
T ss_pred CCCcCC--cccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhce---------EEEecCCC
Confidence 886511 121222 68999999999998887665 99999987652111 11112234
Q ss_pred eCceEEEEEecCCCEEEEecCCC----eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662 130 INDKNFVGLATDGDYVACGSENN----SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA 205 (221)
Q Consensus 130 ~~~v~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 205 (221)
...+..+.|+|+|++|+..+.++ .|++++..++... .+. .+...+....+ ++|++++..
T Consensus 226 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~---------------~~~~~~~~~~~-~~g~l~~~s 288 (695)
T 2bkl_A 226 PTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLV---------------KGVGAKYEVHA-WKDRFYVLT 288 (695)
T ss_dssp TTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEE---------------ECSSCCEEEEE-ETTEEEEEE
T ss_pred CEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eee---------------cCCCceEEEEe-cCCcEEEEE
Confidence 45678899999999988877665 5666654433221 111 12233445555 566644444
Q ss_pred c---CCCeEEEEECCcc
Q psy10662 206 N---SQGIIKIYVIPIR 219 (221)
Q Consensus 206 ~---~dg~i~iw~~~~~ 219 (221)
. .++.|.+|++.++
T Consensus 289 ~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 289 DEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp CTTCTTCEEEEEBTTBC
T ss_pred CCCCCCCEEEEEeCCCC
Confidence 3 2689999998764
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.57 E-value=1.3e-11 Score=88.58 Aligned_cols=192 Identities=13% Similarity=0.066 Sum_probs=123.0
Q ss_pred CCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec----cccc
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG----HIND 77 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~----~~~~ 77 (221)
++.++++...++.|..||.. +++. ..+. ....+.++++++++.++.+. ++.|.+||..+++....... ....
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~-~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~ 99 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSF-TKQV-QRVT-MDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNR 99 (297)
T ss_dssp TTEEEEEETTTTEEEEEETT-TCCE-EEEE-CSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEE
T ss_pred CCEEEEEECCCCEEEEEECC-CCcE-EEEe-CCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCC
Confidence 35567777778899999987 4433 3333 46789999999877777665 56799999987754332221 1235
Q ss_pred eeEEEEeCCCCEEEEecCC---------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EE
Q psy10662 78 KNFVGLATDGDYVACGSEN---------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-AC 147 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d---------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~ 147 (221)
++.++++|+|+++++.... ..-.+|.+........ ..........++|+|+++.+ ++
T Consensus 100 ~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-------------~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 100 FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-------------YFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-------------EEEEESBEEEEEECTTSCEEEEE
T ss_pred CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-------------EeeccccccceEEcCCCCEEEEe
Confidence 7889999999976654321 2234444332111111 12334456789999999866 45
Q ss_pred ecCCCeEEEEEcC--CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 148 GSENNSLYIYYKG--LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 148 ~~~d~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.+.++.|.+|++. ++.....-.+ .....+...+..++++++|++.++...++.|..|+..+++
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~----------~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSV----------YKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEE----------EECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred cCCCCcEEEEeccCCCCcccCcEEE----------EECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 5667899999974 3432111000 0111223456789999999988887778899999998665
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.57 E-value=3.7e-13 Score=108.17 Aligned_cols=203 Identities=14% Similarity=0.093 Sum_probs=122.6
Q ss_pred CCCceEEEEeCC-----CeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCc--------------EEEEE
Q psy10662 1 MNSCHLAFGSAD-----HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQ--------------LKLWN 61 (221)
Q Consensus 1 ~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~--------------v~~wd 61 (221)
|||++||.+..+ ..|++||+. +++.+.. ..+...+..++|+|++.|+.++.++. |++|+
T Consensus 172 PDG~~la~~~~~~G~e~~~i~v~dl~-tg~~~~~-~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~ 249 (741)
T 1yr2_A 172 DDGRLLAYSVQDGGSDWRTVKFVGVA-DGKPLAD-ELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHR 249 (741)
T ss_dssp TTSSEEEEEEEETTCSEEEEEEEETT-TCCEEEE-EEEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECC-CCCCCCc-cCCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEE
Confidence 799999887654 469999998 5554432 21222346789998855776666543 88999
Q ss_pred cCCCccc--eeee--ccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCC--eeeEEEE----------------
Q psy10662 62 INKPNCL--RSFV--GHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLS--KHMHAYR---------------- 114 (221)
Q Consensus 62 ~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~--~~~~~~~---------------- 114 (221)
+.++... ..+. .+...+..+.|+|+|++++..+.+ ..|.+||+.++ +....+.
T Consensus 250 lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~ 329 (741)
T 1yr2_A 250 LGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQ 329 (741)
T ss_dssp TTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTE
T ss_pred CCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCE
Confidence 9776532 2222 223357899999999988776644 38999998765 3022221
Q ss_pred ----------------eecccc--eeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC-CCCceeeeeeecccc
Q psy10662 115 ----------------FDTVRS--MLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG-LSKHMHAYRFDTVRS 175 (221)
Q Consensus 115 ----------------~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~ 175 (221)
++.... .....+..+...+..++++ ++.++++...|+..++|.+. .++....+.+
T Consensus 330 l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~----- 403 (741)
T 1yr2_A 330 LWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL----- 403 (741)
T ss_dssp EEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC-----
T ss_pred EEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC-----
Confidence 011110 1111111222334456666 55677777888887777554 2222222210
Q ss_pred cccccccccccccceeEEEEcCCCcEEE----EecCCCeEEEEECCccc
Q psy10662 176 MLERDRNEDDTNEFVSAVCWRQLSRVLV----AANSQGIIKIYVIPIRV 220 (221)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~----~~~~dg~i~iw~~~~~~ 220 (221)
.....+..++++|+++.|+ +....+.|++||+.+++
T Consensus 404 ---------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 404 ---------PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ---------SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred ---------CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 1245678899999987665 23346899999998764
No 202
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.56 E-value=3.6e-12 Score=95.20 Aligned_cols=111 Identities=7% Similarity=-0.114 Sum_probs=84.6
Q ss_pred CCCceEEEEeCC-----CeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEec----------CCCcEEEEEcCC
Q psy10662 1 MNSCHLAFGSAD-----HCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAS----------TDSQLKLWNINK 64 (221)
Q Consensus 1 ~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~----------~d~~v~~wd~~~ 64 (221)
|+++.+.+.... +.|.++|.. +.+.+..+..-..+ .++++|++ .++.+. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~-t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGS-TGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETT-TTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECC-CCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 356666655542 699999998 78888888866666 89999854 455554 467899999999
Q ss_pred Cccceeeecc-------ccceeEEEEeCCCCEEEEecC--CCeEEEEECCCCeeeEEEE
Q psy10662 65 PNCLRSFVGH-------INDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHAYR 114 (221)
Q Consensus 65 ~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~ 114 (221)
.+.+..+.-. ......+.|+|+|++++.+.. ++.|.+.|+.+.+.+.++.
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 9888776421 123567899999999887753 5789999999999887764
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.54 E-value=1.4e-11 Score=88.03 Aligned_cols=185 Identities=8% Similarity=-0.053 Sum_probs=126.1
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEE--eccCceEEEEEecCCcEEE-ecCCCcEEEEEcCCCcccee-eecccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK--GHRKAVSYVKFLNKEDIVS-ASTDSQLKLWNINKPNCLRS-FVGHIN 76 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~l~s-~~~d~~v~~wd~~~~~~~~~-~~~~~~ 76 (221)
+++.++++...++.|..|+.. . + ...+. .....+.++++.+++.+.. ...++.|..||. +++.... ......
T Consensus 66 ~~g~l~v~~~~~~~i~~~~~~-g-~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~ 141 (299)
T 2z2n_A 66 SDGEVWFTENAANKIGRITKK-G-I-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGS 141 (299)
T ss_dssp TTSCEEEEETTTTEEEEECTT-S-C-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTC
T ss_pred CCCCEEEeCCCCCeEEEECCC-C-c-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCC
Confidence 467777776667889999875 2 2 22232 2345789999998666554 456789999998 5443322 222345
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEE
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYI 156 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 156 (221)
.+..+++.+++.++++...++.|..||. +++... +. .......+..+++++++++.++...++.|..
T Consensus 142 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~-----------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 208 (299)
T 2z2n_A 142 YPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FK-----------IPTPASGPVGITKGNDDALWFVEIIGNKIGR 208 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EE-----------CSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-ee-----------CCCCCCcceeEEECCCCCEEEEccCCceEEE
Confidence 6889999999988887777889999998 554322 10 1122345778999999998777777889999
Q ss_pred EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
||. ++... .+.. ..+...+.+++++++|+++++...++.|..|+..
T Consensus 209 ~~~-~g~~~-~~~~-------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 209 ITT-SGEIT-EFKI-------------PTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp ECT-TCCEE-EEEC-------------SSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred ECC-CCcEE-EEEC-------------CCCCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 998 54422 1210 1233467899999999977776678889999873
No 204
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.53 E-value=1.5e-12 Score=104.27 Aligned_cols=159 Identities=13% Similarity=0.046 Sum_probs=104.8
Q ss_pred CceEEEEEecCCc-EEEecC-CC----cEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCe----------
Q psy10662 35 KAVSYVKFLNKED-IVSAST-DS----QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNS---------- 98 (221)
Q Consensus 35 ~~i~~~~~~~~~~-l~s~~~-d~----~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------- 98 (221)
..+..++|+|++. |+.+.. +| .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 3588999998655 554433 22 8999999998876533222 23678999999999988877655
Q ss_pred ------EEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-----CCeEEEEEcCC------
Q psy10662 99 ------LYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-----NNSLYIYYKGL------ 161 (221)
Q Consensus 99 ------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~------ 161 (221)
|.+|++.+++....+ +.....+...+..+.|+|+|++|+..+. +..|++||+.+
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~---------v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 274 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDIL---------CAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT 274 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEE---------EECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC
T ss_pred cCCCCEEEEEECCCCcccceE---------EeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccC
Confidence 999999876531111 1111123445678999999999887764 56899999876
Q ss_pred CC-ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC----CCeEEEEECCcc
Q psy10662 162 SK-HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS----QGIIKIYVIPIR 219 (221)
Q Consensus 162 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iw~~~~~ 219 (221)
+. ....+. .+...+.. .|+|+|+.|+..+. .+.|.+|++.++
T Consensus 275 ~~~~~~~l~---------------~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 275 GILKWVKLI---------------DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp SSCCCEEEE---------------CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred CccceEEee---------------CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 32 122221 22223333 48888887776654 346999998764
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=7.4e-12 Score=93.80 Aligned_cols=205 Identities=8% Similarity=0.046 Sum_probs=125.3
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEecCCC--cEEEEEcCCCccceee----ec
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSASTDS--QLKLWNINKPNCLRSF----VG 73 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~~d~--~v~~wd~~~~~~~~~~----~~ 73 (221)
|+++++++...++.|++||+. ++........ ..... ++|++++ .|+++..++ .|.+++...+.....+ ..
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~-~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~ 216 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVD-DNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGST 216 (409)
T ss_dssp STTEEEEEETTTTEEEEEETT-TTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTT
T ss_pred CCCCEEEEecCCCcEEEEECC-CCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccch
Confidence 467777777777899999987 5554444433 33344 8999754 567776655 7888887665443333 21
Q ss_pred cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCc-eE-EEEEecC-CCEEEEecC
Q psy10662 74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIND-KN-FVGLATD-GDYVACGSE 150 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~-~~~~~~~-~~~l~~~~~ 150 (221)
....+.+++++|++..|+.+..++.|..||..++.....-... ..+.... .. .++|+|+ +.++++-..
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~---------~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLE---------LSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECC---------CCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccc---------ccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 3456789999995455555667889999998866532110000 0111111 12 8999995 666666677
Q ss_pred CCeEEEEEcCCCCceeeeeeecccc-cccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECCccc
Q psy10662 151 NNSLYIYYKGLSKHMHAYRFDTVRS-MLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIPIRV 220 (221)
Q Consensus 151 d~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~ 220 (221)
++.|+.|+.... ...+. ..... -...-......-.....++++|+|+++++-+ .++.|+.|++++++
T Consensus 288 ~~~I~~~~~~g~--~~~~~-g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFC-GSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp TTEEEEECTTCC--EEEEE-ECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred CCEEEEEecCCC--EEEEE-eCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 889999986543 11111 10000 0000000001123468899999999888888 89999999977654
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.52 E-value=1.6e-11 Score=92.06 Aligned_cols=213 Identities=8% Similarity=0.025 Sum_probs=129.2
Q ss_pred CCCceEEEEeCCC--eEEEEEecCCceeeEEE---Ee-ccCceEEEEEec-CCcEEEecCCCcEEEEEcCCCcccee---
Q psy10662 1 MNSCHLAFGSADH--CVHYYDLRNTKEALAVF---KG-HRKAVSYVKFLN-KEDIVSASTDSQLKLWNINKPNCLRS--- 70 (221)
Q Consensus 1 ~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~---~~-~~~~i~~~~~~~-~~~l~s~~~d~~v~~wd~~~~~~~~~--- 70 (221)
|+++.|+++..++ .|.+++... ......+ .. ....+.+++++| ++.|+.+..++.|+.||..++.....
T Consensus 180 ~~g~~l~~~d~~~~~~I~~~d~~~-~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~ 258 (409)
T 3hrp_A 180 KDKQRVYSIGWEGTHTVYVYMKAS-GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQL 258 (409)
T ss_dssp TTSSEEEEEBSSTTCEEEEEEGGG-TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEEC
T ss_pred cCCCcEEEEecCCCceEEEEEcCC-CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecc
Confidence 4677788877766 788888763 3222333 12 345678999998 77777777789999999987653222
Q ss_pred -eeccccce--eEEEEeCC-CCEEEEecCCCeEEEEECCCCeeeEEEEeec-ccceeE-eeEEEeeCceEEEEEecCCCE
Q psy10662 71 -FVGHINDK--NFVGLATD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDT-VRSMLE-SSFVGHINDKNFVGLATDGDY 144 (221)
Q Consensus 71 -~~~~~~~v--~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~v~~~~~~~~~~~ 144 (221)
..++...- ..++|+|+ +.++++-..++.|..|+.... +..+.-.. .....- ......-.....++++|+|++
T Consensus 259 ~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~l 336 (409)
T 3hrp_A 259 ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNF 336 (409)
T ss_dssp CCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCE
T ss_pred cccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCE
Confidence 11222222 28999995 566677777889999987643 22211000 000000 000001234788999999998
Q ss_pred EEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 145 VACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 145 l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
+++-. .++.|+.|++.++....... .....-...-......-.....++++++|.++++-..++.|+.++++
T Consensus 337 yvad~~~~~~I~~~~~~~G~v~~~~g-~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 337 YIVDGFKGYCLRKLDILDGYVSTVAG-QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEETTTTCEEEEEETTTTEEEEEEE-CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EEEeCCCCCEEEEEECCCCEEEEEeC-CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 88877 88999999976664322111 10000000000001122357899999999988888889999988763
No 207
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.50 E-value=1.4e-10 Score=90.14 Aligned_cols=194 Identities=9% Similarity=-0.045 Sum_probs=131.8
Q ss_pred CCCceEEEEeCCCeEEEEEec-CCceeeEEEEeccCceEEEEEe----cCC-cEEEe-cCCCcEEEEEcCCCccceeeec
Q psy10662 1 MNSCHLAFGSADHCVHYYDLR-NTKEALAVFKGHRKAVSYVKFL----NKE-DIVSA-STDSQLKLWNINKPNCLRSFVG 73 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~-~~~~~~~~~~~~~~~i~~~~~~----~~~-~l~s~-~~d~~v~~wd~~~~~~~~~~~~ 73 (221)
|||+++.+++.|+.|.+||+. .+.+.+..+.. ......++|+ |++ +++++ ..++++.++|..+.+.+..+..
T Consensus 206 pDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 206 ASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp TTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence 689999999999999999994 24566777764 3346789999 454 45544 4579999999999888776542
Q ss_pred ----------ccc-ceeEEEEeCCCCE-EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC
Q psy10662 74 ----------HIN-DKNFVGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD 141 (221)
Q Consensus 74 ----------~~~-~v~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 141 (221)
|.. .+..+..++++.. ++.....|.|.++|....+.+... . .........+.|+|+
T Consensus 285 ~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~-----------~-i~~~~~~~d~~~~pd 352 (567)
T 1qks_A 285 RGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT-----------E-ISAERFLHDGGLDGS 352 (567)
T ss_dssp CEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE-----------E-EECCSSEEEEEECTT
T ss_pred cccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceee-----------e-eeccccccCceECCC
Confidence 112 5778888887664 556677899999998765533221 1 122334667889999
Q ss_pred CCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEec-CCCeEEEEECCc
Q psy10662 142 GDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAAN-SQGIIKIYVIPI 218 (221)
Q Consensus 142 ~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~dg~i~iw~~~~ 218 (221)
+++++++. .++.|.++|+.+++....+... + ...|...-..+ ++|++. ..+++. .++.|.+++..+
T Consensus 353 gr~~~va~~~sn~V~ViD~~t~kl~~~i~vg--g--------~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 353 HRYFITAANARNKLVVIDTKEGKLVAIEDTG--G--------QTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEEEECS--S--------SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecc--C--------cCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 99876655 5789999999988766554310 0 01233211122 578744 444543 478999999876
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.50 E-value=5e-11 Score=85.91 Aligned_cols=188 Identities=6% Similarity=0.023 Sum_probs=118.2
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEE-EEe----ccCceEEEEEecCCcEEEecC-C---------------CcEEEEE
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAV-FKG----HRKAVSYVKFLNKEDIVSAST-D---------------SQLKLWN 61 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~-~~~----~~~~i~~~~~~~~~~l~s~~~-d---------------~~v~~wd 61 (221)
++++++. ..+.|.+||.. ++.... ... ....+.++++.+++.++.+.. + +.|..||
T Consensus 83 g~l~v~~-~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (314)
T 1pjx_A 83 NQLFVAD-MRLGLLVVQTD--GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFT 159 (314)
T ss_dssp SEEEEEE-TTTEEEEEETT--SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEEC
T ss_pred CcEEEEE-CCCCEEEEeCC--CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEEC
Confidence 5545444 44578888876 332221 111 123578999998766555443 3 4677777
Q ss_pred cCCCccceeeeccccceeEEEEe----CCCCEE-EEecCCCeEEEEECC-CCeeeEEEEeecccceeEeeEEEee-CceE
Q psy10662 62 INKPNCLRSFVGHINDKNFVGLA----TDGDYV-ACGSENNSLYIYYKG-LSKHMHAYRFDTVRSMLESSFVGHI-NDKN 134 (221)
Q Consensus 62 ~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l-~~~~~d~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~ 134 (221)
.. ++... +..+......++++ |+++.+ ++...++.|.+||+. .++.... .....+..+. ..+.
T Consensus 160 ~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~--------~~~~~~~~~~~~~p~ 229 (314)
T 1pjx_A 160 TD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK--------KVWGHIPGTHEGGAD 229 (314)
T ss_dssp TT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE--------EEEEECCCCSSCEEE
T ss_pred CC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccc--------eEEEECCCCCCCCCC
Confidence 65 44332 32334456889999 998755 455667899999975 3332110 0011112222 4567
Q ss_pred EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-EEecCCCeEEE
Q psy10662 135 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-VAANSQGIIKI 213 (221)
Q Consensus 135 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i 213 (221)
.++++++|+++++...++.|.+||..+++....+. .+...+.+++|+|+|+.| ++...++.|..
T Consensus 230 ~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~---------------~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~ 294 (314)
T 1pjx_A 230 GMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR---------------CPFEKPSNLHFKPQTKTIFVTEHENNAVWK 294 (314)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE---------------CSSSCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe---------------CCCCCceeEEECCCCCEEEEEeCCCCeEEE
Confidence 89999999988887788899999987665544332 223468899999999955 45556789999
Q ss_pred EECCc
Q psy10662 214 YVIPI 218 (221)
Q Consensus 214 w~~~~ 218 (221)
|++..
T Consensus 295 ~~~~~ 299 (314)
T 1pjx_A 295 FEWQR 299 (314)
T ss_dssp EECSS
T ss_pred EeCCC
Confidence 99874
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.49 E-value=6.2e-11 Score=85.05 Aligned_cols=180 Identities=7% Similarity=0.004 Sum_probs=112.6
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEec----cCceEEEEEecCCcEEEecC----------CCcEEEEEcCCCc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH----RKAVSYVKFLNKEDIVSAST----------DSQLKLWNINKPN 66 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~l~s~~~----------d~~v~~wd~~~~~ 66 (221)
|+|+++++ . ++.|.+||.. +++........ ...+..+++.|++.+..+.. ...-.+|.+....
T Consensus 63 ~dG~l~v~-~-~~~l~~~d~~-~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 63 QSGGYVAT-I-GTKFCALNWK-EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp TTSSEEEE-E-TTEEEEEETT-TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CCCCEEEE-E-CCeEEEEECC-CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 46774444 3 5678999987 44433222211 23478899998776665542 1234555554322
Q ss_pred cceeeeccccceeEEEEeCCCCEE-EEecCCCeEEEEEC--CCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC
Q psy10662 67 CLRSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYYK--GLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD 143 (221)
Q Consensus 67 ~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 143 (221)
....+.......+.++|+|+++.+ ++.+.++.|.+||+ .+++.... +....+......+..++++++|+
T Consensus 140 ~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~--------~~~~~~~~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 140 HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNR--------RSVYKLEKEEQIPDGMCIDAEGK 211 (297)
T ss_dssp CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEE--------EEEEECCGGGCEEEEEEEBTTSC
T ss_pred CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCc--------EEEEECCCCCCCCCeeEECCCCC
Confidence 222233344456889999999865 55667789999987 34432111 01111122234577899999998
Q ss_pred EEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc-CCCcEEEEec
Q psy10662 144 YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR-QLSRVLVAAN 206 (221)
Q Consensus 144 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~ 206 (221)
+.++...++.|..||..+++.+..+. .+...+++++|. |+++.|+.++
T Consensus 212 lwva~~~~~~v~~~d~~tG~~~~~i~---------------~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVTGKRLQTVK---------------LPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEEETTTEEEEECTTTCCEEEEEE---------------CSSSBEEEEEEESGGGCEEEEEE
T ss_pred EEEEEcCCCEEEEEcCCCceEEEEEE---------------CCCCCceEEEEeCCCCCEEEEEc
Confidence 88887778899999998887766654 223468899998 8887766554
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.48 E-value=5e-11 Score=85.24 Aligned_cols=185 Identities=9% Similarity=-0.033 Sum_probs=124.6
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeE-EEEeccCceEEEEEecCCcEEEe-cCCCcEEEEEcCCCccce-eeeccccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALA-VFKGHRKAVSYVKFLNKEDIVSA-STDSQLKLWNINKPNCLR-SFVGHIND 77 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~l~s~-~~d~~v~~wd~~~~~~~~-~~~~~~~~ 77 (221)
++|++.++...++.|.+||.. ++... .+..+...+.++++.+++.+..+ ..++.|..||.. ++... ........
T Consensus 29 ~~g~l~v~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~ 105 (300)
T 2qc5_A 29 EDGKVWFTQHKANKISSLDQS--GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSG 105 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTT--SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCC
T ss_pred CCCCEEEEcCCCCeEEEECCC--CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCC
Confidence 467777776678899999876 22222 22223367899999876665544 447889999987 54422 11223356
Q ss_pred eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEE
Q psy10662 78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIY 157 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 157 (221)
+..+++.+++.++++...++.|..+|.. ++.. .+. +......+..+++++++++.++...++.|..+
T Consensus 106 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~-----------~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 106 PYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYD-----------LPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEE-----------CSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred CccceECCCCCEEEEccCCCeEEEECCC-CCEE-Ecc-----------CCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 8899999999988887778889999876 4432 110 11123467889999999977777667889999
Q ss_pred EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662 158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 216 (221)
|. +++... +.. ..+...+..++++++|++.++....+.|..|+.
T Consensus 173 ~~-~g~~~~-~~~-------------~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 173 TN-TGKLEE-YPL-------------PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp CT-TCCEEE-EEC-------------SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred CC-CCcEEE-eeC-------------CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC
Confidence 87 443221 210 112345788999999988877777788999987
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.47 E-value=6.3e-11 Score=84.72 Aligned_cols=187 Identities=10% Similarity=-0.046 Sum_probs=123.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCcccee-eeccccce
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNCLRS-FVGHINDK 78 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~~~-~~~~~~~v 78 (221)
++++++++...++.|..||.. .......+......+.++++.+++.+. +...++.|..+|.. ++.... +......+
T Consensus 71 ~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~ 148 (300)
T 2qc5_A 71 SLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYP 148 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCE
T ss_pred CCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCc
Confidence 356666666667889999876 322111222234568999998766655 44457889999987 544322 22234568
Q ss_pred eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662 79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY 158 (221)
Q Consensus 79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 158 (221)
..+++.++++++++...++.|..+|. +++... +. .......+..+++++++++.++....+.|.+||
T Consensus 149 ~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~-----------~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 149 AFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YP-----------LPTNAAAPVGITSGNDGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EE-----------CSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred eeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-ee-----------CCCCCCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence 89999999997777777888999987 444321 10 112234578899999998877777778899998
Q ss_pred cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
. ++.... +.. ......+.+++++++|++.++...++.|..|+..
T Consensus 216 ~-~g~~~~-~~~-------------~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 216 T-TGEISE-YDI-------------PTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp T-TCCEEE-EEC-------------SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred C-CCcEEE-EEC-------------CCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 7 333221 110 1123457889999999977777677889998873
No 212
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.47 E-value=2.2e-10 Score=83.29 Aligned_cols=185 Identities=15% Similarity=0.025 Sum_probs=117.8
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec----cccce
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG----HINDK 78 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~----~~~~v 78 (221)
+.++++...++.|..||.. +++. ..+. ....+.+++|.+++.++.++.++ |.+||..+++....... ....+
T Consensus 61 ~~l~~~d~~~~~i~~~d~~-~~~~-~~~~-~~~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~ 136 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLA-SGRK-TVHA-LPFMGSALAKISDSKQLIASDDG-LFLRDTATGVLTLHAELESDLPGNRS 136 (326)
T ss_dssp TEEEEEEGGGTEEEEEETT-TTEE-EEEE-CSSCEEEEEEEETTEEEEEETTE-EEEEETTTCCEEEEECSSTTCTTEEE
T ss_pred CEEEEEECCCCEEEEEECC-CCcE-EEEE-CCCcceEEEEeCCCeEEEEECCC-EEEEECCCCcEEEEeeCCCCCCCCCC
Confidence 4566676678899999987 4443 3333 45679999999877766666544 99999887765332211 12358
Q ss_pred eEEEEeCCCCEEEEecC------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE-ecCC
Q psy10662 79 NFVGLATDGDYVACGSE------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC-GSEN 151 (221)
Q Consensus 79 ~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d 151 (221)
..++++|+|+++++... .+.|..++ +++.. . +.........++|+|+++.++. .+.+
T Consensus 137 ~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~-------------~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 137 NDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-K-------------LFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-E-------------EEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred CCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-E-------------eeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 89999999997665532 24455555 33321 1 1223345678999999987654 4557
Q ss_pred CeEEEEEcC--CC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 152 NSLYIYYKG--LS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 152 ~~i~~~d~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
+.|.+||+. ++ .......+. ........+..++++++|++.++...++.|..|+..
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~----------~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFI----------DSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEE----------ECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred CEEEEEEcccccCCcccCceEEE----------ECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 899999986 43 211000000 011122345789999999887777667889999874
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=1.8e-10 Score=82.98 Aligned_cols=143 Identities=11% Similarity=0.043 Sum_probs=96.3
Q ss_pred CCCc-eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecC-CCcEEEEEcCCCccceeeecc----
Q psy10662 1 MNSC-HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAST-DSQLKLWNINKPNCLRSFVGH---- 74 (221)
Q Consensus 1 ~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~-d~~v~~wd~~~~~~~~~~~~~---- 74 (221)
|+++ +++++..++.|..|+.. ++ ...+..+...+..+++++++.++++.. ++.|..|+.. ++.. .+..+
T Consensus 54 ~~g~~l~~~d~~~~~i~~~~~~--g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~-~~~~~~~~~ 128 (305)
T 3dr2_A 54 EAQRTLVWSDLVGRRVLGWRED--GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH-LLVGRYAGK 128 (305)
T ss_dssp GGGTEEEEEETTTTEEEEEETT--SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECEETTE
T ss_pred CCCCEEEEEECCCCEEEEEeCC--CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE-EEEeccCCC
Confidence 4566 66777778899999874 33 345555677899999998777776654 5789999975 4432 22111
Q ss_pred -ccceeEEEEeCCCCEEEE----ecC-------------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEE
Q psy10662 75 -INDKNFVGLATDGDYVAC----GSE-------------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFV 136 (221)
Q Consensus 75 -~~~v~~~~~~~~~~~l~~----~~~-------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 136 (221)
...+..+++.|+|+++++ |.. .+.|..+|..+++... +. .......+
T Consensus 129 ~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~--------------~~-~~~~p~gl 193 (305)
T 3dr2_A 129 RLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR--------------MA-DLDHPNGL 193 (305)
T ss_dssp ECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE--------------EE-EESSEEEE
T ss_pred ccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE--------------Ee-cCCCCcce
Confidence 134678999999998886 332 2456666665544321 11 33456789
Q ss_pred EEecCCCEEEEecCC------CeEEEEEcCCCC
Q psy10662 137 GLATDGDYVACGSEN------NSLYIYYKGLSK 163 (221)
Q Consensus 137 ~~~~~~~~l~~~~~d------~~i~~~d~~~~~ 163 (221)
+|+|+++.|+++... +.|.+|++....
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 999999987777655 789999986543
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.41 E-value=2.3e-11 Score=97.83 Aligned_cols=191 Identities=7% Similarity=-0.058 Sum_probs=113.6
Q ss_pred CCCceEEEEeCCCe---EEEEEecCC---ceeeEEE-------EeccCceEEEEEecCCc-EEEecC-C----CcEEEEE
Q psy10662 1 MNSCHLAFGSADHC---VHYYDLRNT---KEALAVF-------KGHRKAVSYVKFLNKED-IVSAST-D----SQLKLWN 61 (221)
Q Consensus 1 ~~~~~l~~~~~dg~---i~i~~~~~~---~~~~~~~-------~~~~~~i~~~~~~~~~~-l~s~~~-d----~~v~~wd 61 (221)
|||++++....++. -.+|..... +.....+ .+|...+..++|+|++. |+.++. + ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 56777776655443 556665422 2222222 12333688999998655 554433 2 3699999
Q ss_pred cCCCccceeeeccccceeEEEEeCCCCEEEEecCCCe--------------EEEEECCCCeeeEEEEeecccceeEeeEE
Q psy10662 62 INKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNS--------------LYIYYKGLSKHMHAYRFDTVRSMLESSFV 127 (221)
Q Consensus 62 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 127 (221)
+.+++.+... .+...+..++|+|+ +.|+.++.++. |.+|++.+++....+ +....
T Consensus 196 l~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~l---------v~~~~ 264 (741)
T 1yr2_A 196 VADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQP---------VFATP 264 (741)
T ss_dssp TTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEE---------EECCT
T ss_pred CCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEE---------EeccC
Confidence 9998875432 12223467899999 88887766543 888888765421111 11111
Q ss_pred EeeCceEEEEEecCCCEEEEecCCC-----eEEEEEcCCC--CceeeeeeecccccccccccccccccceeEEEEcCCCc
Q psy10662 128 GHINDKNFVGLATDGDYVACGSENN-----SLYIYYKGLS--KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR 200 (221)
Q Consensus 128 ~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 200 (221)
.+...+..+.|+|||++|+..+.++ .|++||+.++ +....+. .+...+... ++|+|+
T Consensus 265 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~---------------~~~~~~~~~-~~~dg~ 328 (741)
T 1yr2_A 265 ELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI---------------PDLKAQWDF-VDGVGD 328 (741)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE---------------CSSSSCEEE-EEEETT
T ss_pred CCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec---------------CCCCceEEE-EeccCC
Confidence 2223477899999999888777543 8999998765 2012221 122223333 348888
Q ss_pred EEEEecC----CCeEEEEECCc
Q psy10662 201 VLVAANS----QGIIKIYVIPI 218 (221)
Q Consensus 201 ~l~~~~~----dg~i~iw~~~~ 218 (221)
.|+..+. ++.|.+|++.+
T Consensus 329 ~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 329 QLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEEEEECTTCTTCEEEEEECSS
T ss_pred EEEEEECCCCCCCEEEEEeCCC
Confidence 8877765 45699999876
No 215
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.41 E-value=1.8e-10 Score=85.71 Aligned_cols=202 Identities=8% Similarity=-0.018 Sum_probs=126.5
Q ss_pred eEEEEeCCCeEEEEEecCC---ceeeEEEE------ec-cCceEEEEEecCCcEEEecCC------CcEEEEEcCCCccc
Q psy10662 5 HLAFGSADHCVHYYDLRNT---KEALAVFK------GH-RKAVSYVKFLNKEDIVSASTD------SQLKLWNINKPNCL 68 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~---~~~~~~~~------~~-~~~i~~~~~~~~~~l~s~~~d------~~v~~wd~~~~~~~ 68 (221)
+++.|..++.|+++|+.+. -+..++++ .. ......+...|++.++++..+ +.+.++|.++.+.+
T Consensus 98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~ 177 (462)
T 2ece_A 98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPL 177 (462)
T ss_dssp EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEE
T ss_pred EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEE
Confidence 4556777889999998622 14555552 01 123455666787766665544 78999999999988
Q ss_pred eeeecccc---ceeEEEEeCCCCEEEEec-------------------CCCeEEEEECCCCeeeEEEEeecccceeEeeE
Q psy10662 69 RSFVGHIN---DKNFVGLATDGDYVACGS-------------------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSF 126 (221)
Q Consensus 69 ~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 126 (221)
..+..... .-..+.|+|+++.+++.. ...+|.+||+.+++.+.++....
T Consensus 178 ~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~--------- 248 (462)
T 2ece_A 178 GKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE--------- 248 (462)
T ss_dssp EECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT---------
T ss_pred EEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC---------
Confidence 87752222 234588899999888874 36789999999887776652110
Q ss_pred EEeeCceEEEEE--ecCCCEEEEecC------CCeEEEEEcCCCCceeeeeeecccc-cccccc----cccccccceeEE
Q psy10662 127 VGHINDKNFVGL--ATDGDYVACGSE------NNSLYIYYKGLSKHMHAYRFDTVRS-MLERDR----NEDDTNEFVSAV 193 (221)
Q Consensus 127 ~~~~~~v~~~~~--~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~v~~~ 193 (221)
.......+.| +|+++++.++++ ++.|.+|....+........+.... ....+. .+.+-......+
T Consensus 249 --~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 249 --ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp --TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred --CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 1112334444 999998887774 5688887765432211111111110 000010 011112356889
Q ss_pred EEcCCCcEEEEecC-CCeEEEEECC
Q psy10662 194 CWRQLSRVLVAANS-QGIIKIYVIP 217 (221)
Q Consensus 194 ~~~~~~~~l~~~~~-dg~i~iw~~~ 217 (221)
.+|+||++|+++.. .+.|.+|++.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECS
T ss_pred EECCCCCEEEEEeCCCCEEEEEEec
Confidence 99999999988774 8899999985
No 216
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.41 E-value=4.7e-10 Score=78.47 Aligned_cols=203 Identities=12% Similarity=0.058 Sum_probs=131.5
Q ss_pred CCceEEEEeC--CCeEEEEEecCCceeeEEEEeccC-ceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662 2 NSCHLAFGSA--DHCVHYYDLRNTKEALAVFKGHRK-AVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK 78 (221)
Q Consensus 2 ~~~~l~~~~~--dg~i~i~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v 78 (221)
|+.++++.+. ++.|+++|+. +++.+..+..... ....+++..+..+++.-.++.+.++|..+.+.+..+.....
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~-tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~-- 107 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQ-TGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK-- 107 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETT-TCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSS--
T ss_pred CCeEEEECCCCCCCEEEEEECC-CCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCC--
Confidence 4544554443 5799999998 7777777653222 23456666544455666789999999999988888753212
Q ss_pred eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662 79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY 158 (221)
Q Consensus 79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 158 (221)
....++++++.++++..++.|.++|..+.+.+..+..... ...-..++.+.|. ++...+....++.|.+.|
T Consensus 108 ~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~--------~~p~~~~nele~~-dg~lyvn~~~~~~V~vID 178 (266)
T 2iwa_A 108 DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN--------GHRVIRLNELEYI-NGEVWANIWQTDCIARIS 178 (266)
T ss_dssp SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET--------TEECCCEEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC--------CcccccceeEEEE-CCEEEEecCCCCeEEEEE
Confidence 2234566787766666788999999999888776521100 0111235677777 676666665688999999
Q ss_pred cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcE-EEEecCCCeEEEEECCc
Q psy10662 159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRV-LVAANSQGIIKIYVIPI 218 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iw~~~~ 218 (221)
..+++.+..+.+....... ...........+.++|+|+++. ++++...+.+...++..
T Consensus 179 ~~tg~V~~~I~~~g~~~~~--~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 179 AKDGTLLGWILLPNLRKKL--IDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTTCCEEEEEECHHHHHHH--HHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCCcEEEEEECCCccccc--ccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 9999998888753211000 0000011235689999999765 45565688888887754
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.38 E-value=2.1e-10 Score=84.37 Aligned_cols=99 Identities=7% Similarity=-0.188 Sum_probs=73.6
Q ss_pred eEEEEeCCC----eEEEEEecCCceeeEEEEeccCceEEEEEecCC-cEEEec----------CCCcEEEEEcCCCccce
Q psy10662 5 HLAFGSADH----CVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKE-DIVSAS----------TDSQLKLWNINKPNCLR 69 (221)
Q Consensus 5 ~l~~~~~dg----~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~s~~----------~d~~v~~wd~~~~~~~~ 69 (221)
.+++-..++ .|.++|.. +.+.+.++.....+ .+.++|++ +++.+. .++.|.+||+.+++.+.
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~-t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAG-CGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETT-TTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred EEEECCccCCccceEEEEECC-CCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 344444444 88899998 78888888866666 79999854 465554 47899999999999998
Q ss_pred eeecc-------ccceeEEEEeCCCCEEEEecC--CCeEEE--EECCC
Q psy10662 70 SFVGH-------INDKNFVGLATDGDYVACGSE--NNSLYI--YYKGL 106 (221)
Q Consensus 70 ~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~v~i--wd~~~ 106 (221)
.+... ......++++|+|++++++.. +..+.+ +|+.+
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 87533 123578999999998887753 467888 88755
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=5.8e-11 Score=86.96 Aligned_cols=212 Identities=8% Similarity=-0.024 Sum_probs=124.7
Q ss_pred CCCceEEEEe--CCCeEEEEEecCCceeeEEE-------EeccCceEEEEEecCCcEEEecC------CCcEEEEEcCCC
Q psy10662 1 MNSCHLAFGS--ADHCVHYYDLRNTKEALAVF-------KGHRKAVSYVKFLNKEDIVSAST------DSQLKLWNINKP 65 (221)
Q Consensus 1 ~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~l~s~~~------d~~v~~wd~~~~ 65 (221)
|+|+++++.. .++.++||.+. .++.. .+ ..+...+..+++.+++.|..+.. ++.|.+||+.++
T Consensus 26 ~~g~~~v~~~~~~~~~~~l~~~~-~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg 103 (343)
T 2qe8_A 26 PDGRLFLSLHQFYQPEMQVAELT-QDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN 103 (343)
T ss_dssp TTSCEEEEECGGGCCSCSEEEEE-TTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTT
T ss_pred CCCCEEEEeCCCCCCceEEEEEC-CCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCC
Confidence 5778887753 23435666665 44422 11 12446799999998777665543 578999999988
Q ss_pred ccceeeecc------ccceeEEEEeCCCCE-EEEec---CCCeEEEEECCCCeeeEEEEeeccc-c-eeEeeEEE-----
Q psy10662 66 NCLRSFVGH------INDKNFVGLATDGDY-VACGS---ENNSLYIYYKGLSKHMHAYRFDTVR-S-MLESSFVG----- 128 (221)
Q Consensus 66 ~~~~~~~~~------~~~v~~~~~~~~~~~-l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~-~-~~~~~~~~----- 128 (221)
+.+..+... ...+..++++|++.. +++.. .++.|.+||+.+++..+.+.-.... . .......+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~ 183 (343)
T 2qe8_A 104 QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQI 183 (343)
T ss_dssp EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBE
T ss_pred eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEe
Confidence 866655321 234689999986544 45554 6788999999888765543110000 0 00000000
Q ss_pred ---------eeCceEEEEEecCCCEEEEecCCC-eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC
Q psy10662 129 ---------HINDKNFVGLATDGDYVACGSENN-SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL 198 (221)
Q Consensus 129 ---------~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 198 (221)
-...+..++|+|+++.|+.+..++ .+..++....... .+ . .......+ ...++......++++++
T Consensus 184 ~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~-~~--~-~~~~~~~~-~~~g~~g~pdgia~d~~ 258 (343)
T 2qe8_A 184 GQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL-QL--T-DAELGSKI-ERYSEKPICDGISIDKD 258 (343)
T ss_dssp ECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT-TC--C-HHHHHTTC-EEEEECCSCSCEEECTT
T ss_pred ccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC-CC--C-hhhhhcce-EecccCCCCceEEECCC
Confidence 012467899999999888877665 4554443210000 00 0 00000000 00122234567999999
Q ss_pred CcEEEEecCCCeEEEEECCcc
Q psy10662 199 SRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 199 ~~~l~~~~~dg~i~iw~~~~~ 219 (221)
|+++++...++.|.+|+..++
T Consensus 259 G~l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 259 HNIYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp CCEEEEEGGGTEEEEEETTTT
T ss_pred CCEEEEccCCCeEEEEECCCC
Confidence 999999989999999998444
No 219
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.37 E-value=8.2e-10 Score=76.50 Aligned_cols=190 Identities=11% Similarity=0.098 Sum_probs=125.8
Q ss_pred CCceEEEEeCCC--eEEEEEecCCceeeEEEEeccCc-eEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccce
Q psy10662 2 NSCHLAFGSADH--CVHYYDLRNTKEALAVFKGHRKA-VSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK 78 (221)
Q Consensus 2 ~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v 78 (221)
++.++.+.+.+| .|+++|+. +++.+..+...... -..++...+..+++.-.++.+.+||..+.+.+.++....
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~-Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~--- 127 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIE-SGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG--- 127 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTT-TCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS---
T ss_pred CCEEEEECCCCCCceEEEEECC-CCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC---
Confidence 355666766766 89999998 78877777643322 233555545445566679999999999999998886422
Q ss_pred eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEE
Q psy10662 79 NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY 158 (221)
Q Consensus 79 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 158 (221)
....+.++++.|+.+..++.|.++|..+.+.+..+.... .+ ..-..++.+.|. +|+..+..-.+..|.+.|
T Consensus 128 eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~-~g-------~~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 128 EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA-HG-------EELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEE-TT-------EECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc-CC-------ccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 223334567777666668889999999988877752210 00 111334456666 677666665788999999
Q ss_pred cCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662 159 KGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS 207 (221)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 207 (221)
.++++.+..+++......... ........+.++|+|+++.|+..+.
T Consensus 199 p~tG~V~~~Id~~~L~~~~~~---~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 199 PETGKVTGIIDLNGILAEAGP---LPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTTCBEEEEEECTTGGGGSCS---CCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCCCcEEEEEECCcCcccccc---ccCcCCceEEEEEcCCCCEEEEECC
Confidence 999999988876432211110 0112345689999998877777665
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.35 E-value=6.1e-10 Score=82.89 Aligned_cols=204 Identities=9% Similarity=0.010 Sum_probs=118.5
Q ss_pred CCCceEEEEeCC------CeEEEEEecCCceeeEEEEeccCc---eEEEEEecCCc-EEEec------------------
Q psy10662 1 MNSCHLAFGSAD------HCVHYYDLRNTKEALAVFKGHRKA---VSYVKFLNKED-IVSAS------------------ 52 (221)
Q Consensus 1 ~~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~-l~s~~------------------ 52 (221)
|+| +++++..+ |.|.++|.. +.+.+..+.....+ -..+.|+|++. +++..
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~-T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~ 224 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHY-SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKD 224 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTT-TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHH
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECC-CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhh
Confidence 566 66665555 789999987 77777777633222 34577888655 55542
Q ss_pred -CCCcEEEEEcCCCccceeeecc-c-cceeEEEE--eCCCCEEEEec------CCCeEEEEECCCCeeeEEEEeecccce
Q psy10662 53 -TDSQLKLWNINKPNCLRSFVGH-I-NDKNFVGL--ATDGDYVACGS------ENNSLYIYYKGLSKHMHAYRFDTVRSM 121 (221)
Q Consensus 53 -~d~~v~~wd~~~~~~~~~~~~~-~-~~v~~~~~--~~~~~~l~~~~------~d~~v~iwd~~~~~~~~~~~~~~~~~~ 121 (221)
.+.+|.+||+.+++.+..+... . .....+.| +|++++++.++ .++.|.+|....++....-..+.....
T Consensus 225 ~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~ 304 (462)
T 2ece_A 225 RYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEP 304 (462)
T ss_dssp HSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEE
T ss_pred ccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcc
Confidence 3789999999988777776532 1 23445555 99999876665 466888776654432111111111111
Q ss_pred eEeeE-------EEeeCceEEEEEecCCCEEEEecC-CCeEEEEEcCCCCceeeeeeeccccccccccccccc--cccee
Q psy10662 122 LESSF-------VGHINDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT--NEFVS 191 (221)
Q Consensus 122 ~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~ 191 (221)
....+ .+.......+.++|||++|.++.. .+.|.+||+...........-..+..........+. .....
T Consensus 305 v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr 384 (462)
T 2ece_A 305 LEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQ 384 (462)
T ss_dssp CCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCC
T ss_pred ccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCC
Confidence 00000 011245678999999999987775 679999998643222211111111000000000000 11346
Q ss_pred EEEEcCCCcEEEEec
Q psy10662 192 AVCWRQLSRVLVAAN 206 (221)
Q Consensus 192 ~~~~~~~~~~l~~~~ 206 (221)
.++++|||++|+++.
T Consensus 385 ~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 385 MLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSSEEEEEC
T ss_pred EEEEcCCCCEEEEEc
Confidence 799999999999887
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.34 E-value=1.3e-10 Score=92.82 Aligned_cols=185 Identities=14% Similarity=0.144 Sum_probs=110.8
Q ss_pred CCCceEEE-----EeCCCeEEEEEecCCceeeEE-EEeccCceEEEEEecCCcEEEecCCC-------------cEEEEE
Q psy10662 1 MNSCHLAF-----GSADHCVHYYDLRNTKEALAV-FKGHRKAVSYVKFLNKEDIVSASTDS-------------QLKLWN 61 (221)
Q Consensus 1 ~~~~~l~~-----~~~dg~i~i~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~l~s~~~d~-------------~v~~wd 61 (221)
|||++||. |+....|++||+. +++.+.. +... ....++|++++.|+.++.+. .|++|+
T Consensus 138 pDg~~lAy~~~~~G~~~~~i~v~dl~-tg~~~~~~~~~~--k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~ 214 (693)
T 3iuj_A 138 RDGRILAYSLSLAGSDWREIHLMDVE-SKQPLETPLKDV--KFSGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHR 214 (693)
T ss_dssp TTSSEEEEEEECSSCCEEEEEEEETT-TCSEEEEEEEEE--ESCCCEEETTTEEEEEESSCCC-------CCCCEEEEEE
T ss_pred CCCCEEEEEEecCCCceEEEEEEECC-CCCCCccccCCc--eeccEEEeCCCEEEEEEecCcccccccccCCCcEEEEEE
Confidence 78998884 3333579999998 5554332 2211 13567898334477666663 399999
Q ss_pred cCCCcc----ceeeec-cccceeEEEEeCCCCEEEEec----CCCeEEEEECCCCe-eeEEEEeecccceeEeeEEEeeC
Q psy10662 62 INKPNC----LRSFVG-HINDKNFVGLATDGDYVACGS----ENNSLYIYYKGLSK-HMHAYRFDTVRSMLESSFVGHIN 131 (221)
Q Consensus 62 ~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~----~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 131 (221)
+.++.. +..... +......+.|+|+|++++... ..+.|.++|+.+++ .... +..+..
T Consensus 215 lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~-------------l~~~~~ 281 (693)
T 3iuj_A 215 LGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT-------------VQGDLD 281 (693)
T ss_dssp TTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE-------------EECSSS
T ss_pred CCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE-------------EeCCCC
Confidence 977643 222222 344567899999999875432 23589999987653 2222 223333
Q ss_pred ceEEEEEecCCCEEE-EecCC---CeEEEEEcCCCCce--eeeeeecccccccccccccccccceeEEEEcCCCcEEEEe
Q psy10662 132 DKNFVGLATDGDYVA-CGSEN---NSLYIYYKGLSKHM--HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA 205 (221)
Q Consensus 132 ~v~~~~~~~~~~~l~-~~~~d---~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 205 (221)
..... +++++..|+ ....+ +.|..+|+.++... ..+. .+...+. .|+++++.|+..
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~---------------~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI---------------PERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE---------------CCCSSCE--EEEEETTEEEEE
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe---------------cCCCCEE--EEEEECCEEEEE
Confidence 33333 566665544 44333 67888888765431 1111 2333333 888999888776
Q ss_pred cC-CC--eEEEEECCcc
Q psy10662 206 NS-QG--IIKIYVIPIR 219 (221)
Q Consensus 206 ~~-dg--~i~iw~~~~~ 219 (221)
.. ++ .|++|++.++
T Consensus 344 ~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 344 YMVDATARVEQFDYEGK 360 (693)
T ss_dssp EEETTEEEEEEECTTSC
T ss_pred EEECCeeEEEEEECCCC
Confidence 65 43 6888888754
No 222
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.34 E-value=7.3e-10 Score=76.78 Aligned_cols=189 Identities=7% Similarity=-0.070 Sum_probs=126.3
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccC-ceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK-AVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFV 81 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~ 81 (221)
+.++.+.+.+|.|+++|++ +++.+..+ -... .-..+++..+..+++.-.++.+.+||..+.+.+.++... ..-..+
T Consensus 65 ~~Ly~stG~~g~v~~iD~~-Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGL 141 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLE-SAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGL 141 (268)
T ss_dssp TEEEEEETTTTEEEECCSS-CSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCE
T ss_pred CEEEEEcCCCCEEEEEECC-CCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEE
Confidence 4567777888999999998 67777766 3222 123466665555666778999999999999999888642 222344
Q ss_pred EEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662 82 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL 161 (221)
Q Consensus 82 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 161 (221)
+ ++++.|+.+..++.|.++|..+.+.+..+.... . ...-..++.+.|. +|+..+..-.+..|.+.|.++
T Consensus 142 t--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~-~-------g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 142 C--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL-R-------GQPVELINELECA-NGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp E--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE-T-------TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTT
T ss_pred e--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC-C-------CcccccccccEEe-CCEEEEEECCCCeEEEEeCCC
Confidence 4 567777766678899999999998887763211 0 0111234566766 776666555788999999999
Q ss_pred CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662 162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS 207 (221)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 207 (221)
++.+..+++......... .........+.++++|+++.|+..+.
T Consensus 211 G~V~~~Idl~~L~~~~~~--~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 211 GTVVGVIDASALTRAVAG--QVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CBEEEEEECHHHHHHHTT--TCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CcEEEEEECCCCcccccc--cccCcCCceEEEEEcCCCCEEEEeCC
Confidence 999998886532111100 01112345789999997666555543
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.31 E-value=1.7e-09 Score=78.65 Aligned_cols=175 Identities=10% Similarity=0.013 Sum_probs=105.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEec-----cCceEEEEEecCCcEEEecC-------CCcEEEEEcCCCccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH-----RKAVSYVKFLNKEDIVSAST-------DSQLKLWNINKPNCL 68 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~l~s~~~-------d~~v~~wd~~~~~~~ 68 (221)
|+|+++++. .+ .|.+||.. +++.. .+... ...+..++++|++.++.++. .+.|..++ +++..
T Consensus 99 ~dg~l~v~~-~~-gl~~~d~~-~g~~~-~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~ 172 (326)
T 2ghs_A 99 SDSKQLIAS-DD-GLFLRDTA-TGVLT-LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT 172 (326)
T ss_dssp ETTEEEEEE-TT-EEEEEETT-TCCEE-EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE
T ss_pred CCCeEEEEE-CC-CEEEEECC-CCcEE-EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE
Confidence 356666654 44 48889986 44432 23221 13588999998776665543 24455555 44332
Q ss_pred eeeeccccceeEEEEeCCCCEE-EEecCCCeEEEEECC--CC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE
Q psy10662 69 RSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIYYKG--LS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY 144 (221)
Q Consensus 69 ~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 144 (221)
.+.........++|+|+++.+ ++.+.++.|.+||+. ++ +... ......+......+..++++++|++
T Consensus 173 -~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~--------~~~~~~~~~~~~~p~gi~~d~~G~l 243 (326)
T 2ghs_A 173 -KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK--------AEVFIDSTGIKGGMDGSVCDAEGHI 243 (326)
T ss_dssp -EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC--------CEEEEECTTSSSEEEEEEECTTSCE
T ss_pred -EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC--------ceEEEECCCCCCCCCeeEECCCCCE
Confidence 232333456789999999865 455567899999985 44 2110 0000111112234567899999988
Q ss_pred EEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc-CCCcEEEEec
Q psy10662 145 VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR-QLSRVLVAAN 206 (221)
Q Consensus 145 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~ 206 (221)
.++...++.|..||. .++.+..+. .+...+.+++|+ ++++.|+.++
T Consensus 244 wva~~~~~~v~~~d~-~g~~~~~i~---------------~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 244 WNARWGEGAVDRYDT-DGNHIARYE---------------VPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEEETTTEEEEECT-TCCEEEEEE---------------CSCSBEEEEEEESTTSCEEEEEE
T ss_pred EEEEeCCCEEEEECC-CCCEEEEEE---------------CCCCCcEEEEEecCCCCEEEEEe
Confidence 777766788999987 454443332 123458899998 8887665544
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.31 E-value=5.1e-10 Score=89.00 Aligned_cols=193 Identities=10% Similarity=0.063 Sum_probs=125.5
Q ss_pred CCeEEEEEecCCceeeEEEEeccCc--------------------------------eEEEEEec-CCcEEEecCCC---
Q psy10662 12 DHCVHYYDLRNTKEALAVFKGHRKA--------------------------------VSYVKFLN-KEDIVSASTDS--- 55 (221)
Q Consensus 12 dg~i~i~~~~~~~~~~~~~~~~~~~--------------------------------i~~~~~~~-~~~l~s~~~d~--- 55 (221)
+|.|+.||.. +++.+..+...... ...+++.+ .+.++.+..++
T Consensus 189 ~g~v~a~D~~-tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w 267 (677)
T 1kb0_A 189 RGYITAYDAE-TGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPW 267 (677)
T ss_dssp BCEEEEEETT-TCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESS
T ss_pred CCEEEEEECC-CCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccc
Confidence 6899999998 77777776532211 12466776 45666665553
Q ss_pred ----------------cEEEEEcCCCccceeeec--cc-------cceeEEEEeCCC---CEEEEecCCCeEEEEECCCC
Q psy10662 56 ----------------QLKLWNINKPNCLRSFVG--HI-------NDKNFVGLATDG---DYVACGSENNSLYIYYKGLS 107 (221)
Q Consensus 56 ----------------~v~~wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~d~~v~iwd~~~~ 107 (221)
.|..+|.++++.+-.++. |. .....+....+| ..++.++.+|.+.++|..++
T Consensus 268 ~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG 347 (677)
T 1kb0_A 268 SHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG 347 (677)
T ss_dssp CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred cCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC
Confidence 599999999988776643 21 122233444467 67899999999999999999
Q ss_pred eeeEEEEeeccc--------ceeEe------------eEEEee--CceEEEEEecCCCEEEEecCC--------------
Q psy10662 108 KHMHAYRFDTVR--------SMLES------------SFVGHI--NDKNFVGLATDGDYVACGSEN-------------- 151 (221)
Q Consensus 108 ~~~~~~~~~~~~--------~~~~~------------~~~~~~--~~v~~~~~~~~~~~l~~~~~d-------------- 151 (221)
+.+..+.+.... .+.+. ...+.. ..-..++++|+..++++...+
T Consensus 348 ~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g 427 (677)
T 1kb0_A 348 KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFN 427 (677)
T ss_dssp CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTT
T ss_pred CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccc
Confidence 998877543321 11110 000000 000257889988887775432
Q ss_pred -----------------------------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE
Q psy10662 152 -----------------------------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL 202 (221)
Q Consensus 152 -----------------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 202 (221)
|.|..||+.+++.+-.+.. ..++....+..++.++
T Consensus 428 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----------------~~~~~~g~~~~~g~~v 491 (677)
T 1kb0_A 428 QAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH----------------VSPWNGGTLTTAGNVV 491 (677)
T ss_dssp CCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE----------------SSSCCCCEEEETTTEE
T ss_pred cccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC----------------CCCCcCcceEeCCCEE
Confidence 6788899888876554431 1223344456678888
Q ss_pred EEecCCCeEEEEECCcccC
Q psy10662 203 VAANSQGIIKIYVIPIRVL 221 (221)
Q Consensus 203 ~~~~~dg~i~iw~~~~~~l 221 (221)
+.++.||.+++||..+|++
T Consensus 492 ~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 492 FQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEECTTSEEEEEETTTCCE
T ss_pred EEECCCCcEEEEECCCCce
Confidence 9999999999999998863
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.29 E-value=7.3e-10 Score=88.29 Aligned_cols=193 Identities=10% Similarity=0.046 Sum_probs=123.0
Q ss_pred CCeEEEEEecCCceeeEEEEecc-------------------------------CceEEEEEec-CCcEEEecCCC----
Q psy10662 12 DHCVHYYDLRNTKEALAVFKGHR-------------------------------KAVSYVKFLN-KEDIVSASTDS---- 55 (221)
Q Consensus 12 dg~i~i~~~~~~~~~~~~~~~~~-------------------------------~~i~~~~~~~-~~~l~s~~~d~---- 55 (221)
+|.|+.||.. +++.+..+.... ..-..+++.| .+.++.+..++
T Consensus 182 ~g~v~a~D~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 182 RGYVTAYDAE-TGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWD 260 (689)
T ss_dssp BCEEEEEETT-TCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECC-CCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccc
Confidence 6899999998 777777665210 0112567776 46677777665
Q ss_pred ---------------cEEEEEcCCCccceeeec--cc-------cceeEEEEeCCCC---EEEEecCCCeEEEEECCCCe
Q psy10662 56 ---------------QLKLWNINKPNCLRSFVG--HI-------NDKNFVGLATDGD---YVACGSENNSLYIYYKGLSK 108 (221)
Q Consensus 56 ---------------~v~~wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~v~iwd~~~~~ 108 (221)
.|..+|.++++.+-.++. |. .+........+|+ .++.++.+|.+.++|.++++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 399999999998876643 21 1222223333564 78899999999999999999
Q ss_pred eeEEEEeecccc---------eeEee------EEEee-----------CceEEEEEecCCCEEEEecC------------
Q psy10662 109 HMHAYRFDTVRS---------MLESS------FVGHI-----------NDKNFVGLATDGDYVACGSE------------ 150 (221)
Q Consensus 109 ~~~~~~~~~~~~---------~~~~~------~~~~~-----------~~v~~~~~~~~~~~l~~~~~------------ 150 (221)
.+....+..... ..+.. +.... ..-..++++|+..++++...
T Consensus 341 ~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~ 420 (689)
T 1yiq_A 341 LLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEA 420 (689)
T ss_dssp EEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSC
T ss_pred EeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccc
Confidence 987654433111 00000 00000 00123678888777776532
Q ss_pred ---------------------------------CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC
Q psy10662 151 ---------------------------------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ 197 (221)
Q Consensus 151 ---------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 197 (221)
+|.|+.||+.+++.+-.+.. ..+...-.+..
T Consensus 421 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----------------~~~~~~g~~~t 484 (689)
T 1yiq_A 421 PKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY----------------VTIFNGGTLST 484 (689)
T ss_dssp CCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE----------------SSSCCCCEEEE
T ss_pred ccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccC----------------CCCccCccceE
Confidence 36788888888876554431 11222234556
Q ss_pred CCcEEEEecCCCeEEEEECCcccC
Q psy10662 198 LSRVLVAANSQGIIKIYVIPIRVL 221 (221)
Q Consensus 198 ~~~~l~~~~~dg~i~iw~~~~~~l 221 (221)
.+.+++.++.||.++.||.++|++
T Consensus 485 agglvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 485 AGNLVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCCEEEEECCCCcEEEEECCCCcc
Confidence 788999999999999999999873
No 226
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.28 E-value=1.1e-09 Score=78.92 Aligned_cols=181 Identities=8% Similarity=-0.001 Sum_probs=109.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEec-----cCceEEEEEecCCcEEE-----ecC-------------CCcE
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGH-----RKAVSYVKFLNKEDIVS-----AST-------------DSQL 57 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~l~s-----~~~-------------d~~v 57 (221)
|+|+++++...++.|.+|+.. ++. ..+..+ ...+..+++.+++.+.. +.. .+.|
T Consensus 95 ~dG~l~v~~~~~~~v~~~~~~--g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v 171 (305)
T 3dr2_A 95 AQQRLVHCEHGRRAITRSDAD--GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSV 171 (305)
T ss_dssp TTSCEEEEETTTTEEEEECTT--SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEE
T ss_pred CCCCEEEEECCCCEEEEECCC--CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeE
Confidence 467766665556788888875 322 222111 13467899998776655 332 2567
Q ss_pred EEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCC------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeC
Q psy10662 58 KLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSEN------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHIN 131 (221)
Q Consensus 58 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (221)
..+|..+++..... .......++|+|+++.++.+... +.|.+|++.... +.... .. ......
T Consensus 172 ~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~-------~~--~~~~~~ 239 (305)
T 3dr2_A 172 YRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRR-------HF--ASVPDG 239 (305)
T ss_dssp EEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEE-------EE--ECCSSS
T ss_pred EEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCe-------EE--EECCCC
Confidence 77777666544332 33456789999999977666554 689999886554 21110 00 001123
Q ss_pred ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeE
Q psy10662 132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGII 211 (221)
Q Consensus 132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 211 (221)
.+..++++++|++.+ ++.+ .|.+|+. .++.+..+. .+. .+.+++|+|+++.|+.++.++ +
T Consensus 240 ~pdgi~~d~~G~lwv-~~~~-gv~~~~~-~g~~~~~~~---------------~~~-~~~~~~f~~d~~~L~it~~~~-l 299 (305)
T 3dr2_A 240 LPDGFCVDRGGWLWS-SSGT-GVCVFDS-DGQLLGHIP---------------TPG-TASNCTFDQAQQRLFITGGPC-L 299 (305)
T ss_dssp CCCSEEECTTSCEEE-CCSS-EEEEECT-TSCEEEEEE---------------CSS-CCCEEEECTTSCEEEEEETTE-E
T ss_pred CCCeEEECCCCCEEE-ecCC-cEEEECC-CCCEEEEEE---------------CCC-ceeEEEEeCCCCEEEEEcCCe-E
Confidence 455788999999544 4444 4889987 344443332 111 478899999998888877665 4
Q ss_pred EEEEC
Q psy10662 212 KIYVI 216 (221)
Q Consensus 212 ~iw~~ 216 (221)
..+++
T Consensus 300 ~~~~~ 304 (305)
T 3dr2_A 300 WMLPL 304 (305)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 33343
No 227
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.25 E-value=2.2e-08 Score=68.79 Aligned_cols=190 Identities=8% Similarity=-0.006 Sum_probs=123.2
Q ss_pred CceEEEEeCCC--eEEEEEecCCceeeEEEEeccCc-eEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 3 SCHLAFGSADH--CVHYYDLRNTKEALAVFKGHRKA-VSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 3 ~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
+.++.+.+.+| .|+.+|+. +++.+..+...... -..+++..+..+...-.++.+.+||..+.+.+.++.... .-.
T Consensus 31 ~~LyestG~~g~S~v~~vD~~-tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gw 108 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLE-TGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGW 108 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETT-TCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCC
T ss_pred CEEEEECCCCCCceEEEEECC-CCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-Cce
Confidence 34555655654 89999998 78877777643322 234555555555566779999999999999998886432 223
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
.++ ++++.|+.+..++.|.++|..+.+.+..+.... .+ ..-..++.+.+. +|+..+..-.+..|.+.|.
T Consensus 109 glt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g-------~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 109 ALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GG-------RPLDNLNELEWV-NGELLANVWLTSRIARIDP 177 (243)
T ss_dssp EEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE-TT-------EECCCEEEEEEE-TTEEEEEETTTTEEEEECT
T ss_pred EEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CC-------cccccceeeEEe-CCEEEEEECCCCeEEEEEC
Confidence 444 566666666668899999999988887763211 00 011234556655 6766666656789999999
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS 207 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 207 (221)
++++.+..+++........... .......+.++++|+++.|+..+.
T Consensus 178 ~tG~V~~~idl~~l~~~~~~~~--~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 178 ASGKVVAWIDLQALVPDADALT--DSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTCBEEEEEECGGGSTTTTSCC--CTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEECCcCcccccccc--CCcCCceEEEEEcCCCCEEEEECC
Confidence 9999998887654322111100 112345789999998766666554
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.25 E-value=1e-09 Score=87.25 Aligned_cols=164 Identities=9% Similarity=0.073 Sum_probs=108.6
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEec-c----CceEEEEEecCCcEEEecC------CCcEEEEEcCCCccceee
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH-R----KAVSYVKFLNKEDIVSAST------DSQLKLWNINKPNCLRSF 71 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~----~~i~~~~~~~~~~l~s~~~------d~~v~~wd~~~~~~~~~~ 71 (221)
+..|++++.|+.|..+|.. +++.+..+..+ . ..+.+--...++.++.++. ++.|+.+|.++++.+-.+
T Consensus 128 ~~~v~v~~~dg~l~alD~~-tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAA-TGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TTEEEEECTTSEEEEEETT-TCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECC-CCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 4677888899999999998 78888777654 1 1222111112556665543 799999999999887665
Q ss_pred ecccc--------------------------------ceeEEEEeCCCCEEEEecCCC-------------------eEE
Q psy10662 72 VGHIN--------------------------------DKNFVGLATDGDYVACGSENN-------------------SLY 100 (221)
Q Consensus 72 ~~~~~--------------------------------~v~~~~~~~~~~~l~~~~~d~-------------------~v~ 100 (221)
..... ....++++|++..++.+..++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 42211 113578889888888777664 599
Q ss_pred EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC---CEEEEecCCCeEEEEEcCCCCceeeeeee
Q psy10662 101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG---DYVACGSENNSLYIYYKGLSKHMHAYRFD 171 (221)
Q Consensus 101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 171 (221)
.+|..+++.+..++....... .+. .......+....+| ..++.++.+|.++++|..+++.+..+.+.
T Consensus 287 AlD~~TG~~~W~~~~~~~d~w---d~~-~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~ 356 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNW---DYT-STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFV 356 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCS---CCC-CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred EEECCCCCEEEEEecCCCccc---ccc-cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccccc
Confidence 999999998877642211000 000 01222333444577 68999999999999999999988776543
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.24 E-value=1.8e-09 Score=79.06 Aligned_cols=188 Identities=9% Similarity=0.009 Sum_probs=114.7
Q ss_pred CCCceEEEEeC-----CCeEEEEEecCCceeeEEEEec------cCceEEEEEec-CCcE-EEec---CCCcEEEEEcCC
Q psy10662 1 MNSCHLAFGSA-----DHCVHYYDLRNTKEALAVFKGH------RKAVSYVKFLN-KEDI-VSAS---TDSQLKLWNINK 64 (221)
Q Consensus 1 ~~~~~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~------~~~i~~~~~~~-~~~l-~s~~---~d~~v~~wd~~~ 64 (221)
|+++++++-.. ++.|.+||+. +++.+..+... ...+..+++++ ++.+ ++-. .++.|.+||+.+
T Consensus 76 ~~g~L~v~D~g~~~~~~~~i~~~d~~-tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 76 GNGIVWMLDNGNQSKSVPKLVAWDTL-NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp SSSEEEEEECHHHHTSCCEEEEEETT-TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred CCCcEEEEcCCCCcCCCCeEEEEECC-CCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence 35555554433 5789999987 66666666532 23568999996 4554 4544 578999999987
Q ss_pred Cccceeeeccc-----------------------------cceeEEEEeCCCCEEEEecCCC-eEEEEECCCCeeeEEEE
Q psy10662 65 PNCLRSFVGHI-----------------------------NDKNFVGLATDGDYVACGSENN-SLYIYYKGLSKHMHAYR 114 (221)
Q Consensus 65 ~~~~~~~~~~~-----------------------------~~v~~~~~~~~~~~l~~~~~d~-~v~iwd~~~~~~~~~~~ 114 (221)
++..+.+..|. ..+..++|+|+++.|+.+...+ .+..++......-
T Consensus 155 g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~---- 230 (343)
T 2qe8_A 155 GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL---- 230 (343)
T ss_dssp CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT----
T ss_pred CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC----
Confidence 76554432210 1357899999998777666554 4444442100000
Q ss_pred eecccceeEe--eEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeE
Q psy10662 115 FDTVRSMLES--SFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSA 192 (221)
Q Consensus 115 ~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 192 (221)
......... ...++......++++++|+++++...++.|.+||..+++...... ..+...+.+
T Consensus 231 -~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~--------------~~~~~~p~~ 295 (343)
T 2qe8_A 231 -QLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT--------------DEKLSWTDS 295 (343)
T ss_dssp -TCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE--------------CGGGSCEEE
T ss_pred -CCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEE--------------CCceecCCe
Confidence 000000000 112344456789999999999999999999999984443211111 012345789
Q ss_pred EEEcCCCcEEEEecCC
Q psy10662 193 VCWRQLSRVLVAANSQ 208 (221)
Q Consensus 193 ~~~~~~~~~l~~~~~d 208 (221)
++|.++++++++.+..
T Consensus 296 va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 296 FNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEECTTSCEEEEECCG
T ss_pred eEECCCCcEEEEeCcc
Confidence 9999999888887643
No 230
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.21 E-value=7.8e-09 Score=71.69 Aligned_cols=166 Identities=7% Similarity=-0.025 Sum_probs=113.4
Q ss_pred eeeEEEEeccC--ceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeE--EEEeCCCCEEEEecCCCeEE
Q psy10662 25 EALAVFKGHRK--AVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNF--VGLATDGDYVACGSENNSLY 100 (221)
Q Consensus 25 ~~~~~~~~~~~--~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~d~~v~ 100 (221)
+.+.++. |.. ....+.|+.+..+++.+.+|.|+++|+++++.+..+ -...... +++.. +.+.+..-.++.+.
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g-~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDG-ERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECS-SCEEEEESSSCEEE
T ss_pred EEEEEEc-CCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeC-CEEEEEEccCCEEE
Confidence 3445553 443 357899987666778899999999999999998877 3333333 44432 23445555788999
Q ss_pred EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccc
Q psy10662 101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERD 180 (221)
Q Consensus 101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 180 (221)
+||..+.+.+.++.. ...- ..+.++++.|+.+..++.|.++|..+.+.+..+.......
T Consensus 120 V~D~~Tl~~~~ti~~--------------~~eG--wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~----- 178 (268)
T 3nok_A 120 TWSGMPPQRERTTRY--------------SGEG--WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ----- 178 (268)
T ss_dssp EEETTTTEEEEEEEC--------------SSCC--CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE-----
T ss_pred EEECCcCcEEEEEeC--------------CCce--eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc-----
Confidence 999999999888632 1111 2233667777777778999999999988877775332111
Q ss_pred ccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662 181 RNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL 221 (221)
Q Consensus 181 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l 221 (221)
.-..++.+.|. +|++.+..-.++.|.+.|..++++
T Consensus 179 -----~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 179 -----PVELINELECA-NGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp -----ECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBE
T ss_pred -----ccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcE
Confidence 11234667776 776555555688999999998864
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.21 E-value=1.3e-12 Score=96.65 Aligned_cols=145 Identities=10% Similarity=0.048 Sum_probs=81.5
Q ss_pred cCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeE
Q psy10662 44 NKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123 (221)
Q Consensus 44 ~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 123 (221)
.++.+++++.|+.|+.||..+++.+..+.. +.+.+..+.+++..+++++.|+.|..||..+++.+..+....... .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~--~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL--V 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH--H
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc--c
Confidence 367899999999999999999999887765 455555566677788888899999999998888765542111000 0
Q ss_pred eeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEE
Q psy10662 124 SSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLV 203 (221)
Q Consensus 124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 203 (221)
...+ .+. .+..+++++.++.++.||..+++.+..+.. +. ...++|++..++
T Consensus 84 -----~~sp----~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~---------------~~----~~~~~p~~~~v~ 134 (369)
T 2hz6_A 84 -----QASP----CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSS---------------AF----ADSLSPSTSLLY 134 (369)
T ss_dssp -----TTCS----CC------CCCCEEEEEEEEECCC-----------------------------------------EE
T ss_pred -----ccCc----eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecC---------------CC----cccccccCCEEE
Confidence 0001 111 345677888899999999998887654431 11 123456888999
Q ss_pred EecCCCeEEEEECCcccC
Q psy10662 204 AANSQGIIKIYVIPIRVL 221 (221)
Q Consensus 204 ~~~~dg~i~iw~~~~~~l 221 (221)
+++.|+.|+.||..+|++
T Consensus 135 ~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 135 LGRTEYTITMYDTKTREL 152 (369)
T ss_dssp EEEEEEEEECCCSSSSSC
T ss_pred EEecCCEEEEEECCCCCE
Confidence 999999999999998763
No 232
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.20 E-value=4.9e-09 Score=83.56 Aligned_cols=163 Identities=10% Similarity=0.089 Sum_probs=105.6
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEec--cCceEEEEEec---CCcEEEec------CCCcEEEEEcCCCccceee
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH--RKAVSYVKFLN---KEDIVSAS------TDSQLKLWNINKPNCLRSF 71 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~--~~~i~~~~~~~---~~~l~s~~------~d~~v~~wd~~~~~~~~~~ 71 (221)
+..+++++.|+.|..+|.. +++.+..+... ......+..+| ++.++.++ .++.|+.||.++++.+-.+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~-TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAK-TGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETT-TCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECC-CCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 4577888899999999998 78777776642 11111111122 55665554 3789999999999887655
Q ss_pred ecc-------------------------------ccceeEEEEeCCCCEEEEecCCCe-------------------EEE
Q psy10662 72 VGH-------------------------------INDKNFVGLATDGDYVACGSENNS-------------------LYI 101 (221)
Q Consensus 72 ~~~-------------------------------~~~v~~~~~~~~~~~l~~~~~d~~-------------------v~i 101 (221)
... ......+++.|+..+++.+..++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 311 011125788898888888887764 999
Q ss_pred EECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC---EEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662 102 YYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD---YVACGSENNSLYIYYKGLSKHMHAYRF 170 (221)
Q Consensus 102 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~ 170 (221)
+|.++++.+..++....... .+ .....+.......+|+ .++.++.+|.++++|.++++.+....+
T Consensus 280 lD~~TG~~~W~~~~~~~d~w---d~-~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~ 347 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAW---DY-TATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGI 347 (689)
T ss_dssp EETTTCCEEEEEESSTTCCS---CC-CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEES
T ss_pred EEccCCceeEeeecCCcccc---cc-cCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccc
Confidence 99999998877642211000 00 0111222223333565 788999999999999999998865544
No 233
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.19 E-value=3.3e-08 Score=73.18 Aligned_cols=154 Identities=10% Similarity=-0.048 Sum_probs=99.0
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEec---------cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH---------RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG 73 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~ 73 (221)
+..+.+++.++.|..+|.. +++.+...... ...+.+.....++.++.++.++.|..+|.++++.+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~-tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNAD-DGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETT-TCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEcc-CCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 4567788889999999997 67776665542 1223332223467888899999999999999988766543
Q ss_pred cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662 74 HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS 153 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 153 (221)
........... +..++.++.++.|..+|..+++.+..+...... ....... ..... +..+++++.++.
T Consensus 132 ~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~----~~~~~~~----~~~~~--~~~v~~g~~~g~ 199 (376)
T 3q7m_A 132 AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPS----LSLRGES----APTTA--FGAAVVGGDNGR 199 (376)
T ss_dssp SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC---------CCCC----CCEEE--TTEEEECCTTTE
T ss_pred CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCc----eeecCCC----CcEEE--CCEEEEEcCCCE
Confidence 32222222222 457778888999999999999887665221100 0000001 11111 346777888999
Q ss_pred EEEEEcCCCCceeeee
Q psy10662 154 LYIYYKGLSKHMHAYR 169 (221)
Q Consensus 154 i~~~d~~~~~~~~~~~ 169 (221)
+..+|..+++.+-...
T Consensus 200 l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQR 215 (376)
T ss_dssp EEEEETTTCCEEEEEE
T ss_pred EEEEECCCCcEEEEEe
Confidence 9999999888765544
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.16 E-value=1.6e-08 Score=70.08 Aligned_cols=168 Identities=9% Similarity=0.056 Sum_probs=110.8
Q ss_pred eeeEEEEeccC--ceEEEEEecCCcEEEecCCC--cEEEEEcCCCccceeeeccccceeEEEEeCCCCEE-EEecCCCeE
Q psy10662 25 EALAVFKGHRK--AVSYVKFLNKEDIVSASTDS--QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYV-ACGSENNSL 99 (221)
Q Consensus 25 ~~~~~~~~~~~--~i~~~~~~~~~~l~s~~~d~--~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v 99 (221)
+.+.++. |.. ....+.|+++..+.+++.+| .|+++|+++++.+..+... .......+.+.++.+ +..-.++.+
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEec-CCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEE
Confidence 3455554 543 35889998554456777766 8999999999998877533 333333333344444 444568899
Q ss_pred EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccc
Q psy10662 100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLER 179 (221)
Q Consensus 100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 179 (221)
.+||..+.+.+.++... . ....+.++++.|+.+..++.|.++|..+.+.+..+.....+.
T Consensus 110 ~v~D~~t~~~~~ti~~~--------------~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~---- 169 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYD--------------G--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGE---- 169 (262)
T ss_dssp EEEETTTCCEEEEEECS--------------S--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTE----
T ss_pred EEEECccCcEEEEEECC--------------C--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCc----
Confidence 99999999998876221 1 123344677777777778899999999988877765322110
Q ss_pred cccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662 180 DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL 221 (221)
Q Consensus 180 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l 221 (221)
.-..++.+.|. +|++.+..-.++.|.+.|..++++
T Consensus 170 ------~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 170 ------ELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp ------ECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBE
T ss_pred ------cccccceeEEE-CCEEEEEEccCCeEEEEECCCCcE
Confidence 01234557775 676665555688999999988864
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.15 E-value=1.7e-08 Score=77.79 Aligned_cols=209 Identities=8% Similarity=-0.004 Sum_probs=127.2
Q ss_pred CCCceEEEEeC-CCeEEEEEecCCceeeEEEEec-cCceEEEEE-e-c-CCcEEEec------------------CCCcE
Q psy10662 1 MNSCHLAFGSA-DHCVHYYDLRNTKEALAVFKGH-RKAVSYVKF-L-N-KEDIVSAS------------------TDSQL 57 (221)
Q Consensus 1 ~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~-~-~-~~~l~s~~------------------~d~~v 57 (221)
+||++|..... ++.|.+.|+. +.++.+.+.-- ...+..+++ . | ++++++++ .++.+
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~-t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCD-VMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETT-TTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECC-CceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 36777776665 4579999998 77777755422 245788887 3 5 45566653 24679
Q ss_pred EEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCCC---------------eEEEEECCCC-------e-----ee
Q psy10662 58 KLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSENN---------------SLYIYYKGLS-------K-----HM 110 (221)
Q Consensus 58 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------~v~iwd~~~~-------~-----~~ 110 (221)
.+.|..+.+.+.++.-.. ....++++|+|+++++.+.+. .|.+.|.... + .+
T Consensus 178 tvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999999888877775322 457788999999988877553 3455543111 0 01
Q ss_pred EEEEeeccc--cee-EeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeeccccccccccccccc
Q psy10662 111 HAYRFDTVR--SML-ESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT 186 (221)
Q Consensus 111 ~~~~~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (221)
..+ |... ... +..+. -.....++.++|||+++++++ .+..|.++|+.+.+....-+++....... .. .-
T Consensus 257 ~VI--D~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~---~v-~v 329 (595)
T 1fwx_A 257 KVV--DGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA---EP-EL 329 (595)
T ss_dssp EEE--ECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE---CC-BC
T ss_pred EEE--eCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE---Ec-CC
Confidence 111 2222 112 22222 234567899999999876655 67899999988543210000000000000 00 12
Q ss_pred ccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 187 NEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 187 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
......++|+|+|....+.-.|++|..|++.+
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 33568899999994444555799999999875
No 236
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=3.8e-09 Score=77.83 Aligned_cols=108 Identities=10% Similarity=-0.018 Sum_probs=81.0
Q ss_pred CCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec----------CCCeEEEEECCCCeeeEEEEeecccceeE
Q psy10662 54 DSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS----------ENNSLYIYYKGLSKHMHAYRFDTVRSMLE 123 (221)
Q Consensus 54 d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~ 123 (221)
++.|.+.|..+.+.+..+.....+ . ++++|+|++++++. .++.|.+||..+.+.+.++.......
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r--- 132 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPR--- 132 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC---
T ss_pred CCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccc---
Confidence 679999999999999888654555 4 99999999876664 36789999999998887752110000
Q ss_pred eeEEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCCCCceeeee
Q psy10662 124 SSFVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHAYR 169 (221)
Q Consensus 124 ~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~ 169 (221)
.........++|+|||++++++.. ++.|.++|+.+.+.+..+.
T Consensus 133 ---~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 133 ---FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp ---CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred ---cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 000123556899999999888864 6899999999998887774
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.14 E-value=7.8e-08 Score=67.31 Aligned_cols=170 Identities=13% Similarity=0.052 Sum_probs=112.9
Q ss_pred ceeeEEEEeccC--ceEEEEEecCCcEEEec-C--CCcEEEEEcCCCccceeeecccc-ceeEEEEeCCCCEEEEecCCC
Q psy10662 24 KEALAVFKGHRK--AVSYVKFLNKEDIVSAS-T--DSQLKLWNINKPNCLRSFVGHIN-DKNFVGLATDGDYVACGSENN 97 (221)
Q Consensus 24 ~~~~~~~~~~~~--~i~~~~~~~~~~l~s~~-~--d~~v~~wd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~ 97 (221)
.+.+.++. |.. ....++|++++.|+.++ . ++.|.++|+.+++.+..+.-... ....+++.. +...++.-.++
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~ 86 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCS
T ss_pred ceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCC
Confidence 34556665 553 36899999866665543 2 68999999999998887642221 223455542 23445556788
Q ss_pred eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccc
Q psy10662 98 SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML 177 (221)
Q Consensus 98 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 177 (221)
.+.++|..+.+.+.++.. + ... ...++++|+.++++..++.|.++|..+.+....+......
T Consensus 87 ~v~viD~~t~~v~~~i~~------------g-~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~--- 148 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTH------------Q-MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG--- 148 (266)
T ss_dssp EEEEEETTTTEEEEEEEC------------C-SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT---
T ss_pred EEEEEECCCCcEEEEEEC------------C-CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC---
Confidence 999999999988877521 1 011 2335678887777777899999999988877766532210
Q ss_pred cccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662 178 ERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL 221 (221)
Q Consensus 178 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l 221 (221)
..-..++.+.|. +|+..+....++.|.+.|..++++
T Consensus 149 -------~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 149 -------HRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp -------EECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCE
T ss_pred -------cccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcE
Confidence 011135677887 776555555688999999998763
No 238
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.11 E-value=1.6e-08 Score=80.90 Aligned_cols=188 Identities=11% Similarity=0.076 Sum_probs=113.2
Q ss_pred CCceEEEEeCCC-------------eEEEEEecCCce-eeEEEE--e-ccCceEEEEEecCCc-EE-Eec---CCCcEEE
Q psy10662 2 NSCHLAFGSADH-------------CVHYYDLRNTKE-ALAVFK--G-HRKAVSYVKFLNKED-IV-SAS---TDSQLKL 59 (221)
Q Consensus 2 ~~~~l~~~~~dg-------------~i~i~~~~~~~~-~~~~~~--~-~~~~i~~~~~~~~~~-l~-s~~---~d~~v~~ 59 (221)
|++.|+.++.+. .|++|++.+... ....+. . |...+..+.|+|++. |+ +.+ ....|++
T Consensus 184 Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 263 (693)
T 3iuj_A 184 GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYV 263 (693)
T ss_dssp TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEE
T ss_pred CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE
Confidence 567777777664 499999873322 122222 2 444578899998655 43 332 2358999
Q ss_pred EEcCCCc-cceeeeccccceeEEEEeCCCCEE-EEecC---CCeEEEEECCCCee--eEEEEeecccceeEeeEEEeeCc
Q psy10662 60 WNINKPN-CLRSFVGHINDKNFVGLATDGDYV-ACGSE---NNSLYIYYKGLSKH--MHAYRFDTVRSMLESSFVGHIND 132 (221)
Q Consensus 60 wd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~---d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 132 (221)
+|+.++. ....+..+....... ++++++.| +.+.. .+.|..+|+.+++. ... +..+...
T Consensus 264 ~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~-------------l~~~~~~ 329 (693)
T 3iuj_A 264 KDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRD-------------LIPERQQ 329 (693)
T ss_dssp EETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE-------------EECCCSS
T ss_pred EECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEE-------------EecCCCC
Confidence 9997764 344555555555554 56666654 44433 36788999876543 111 2334444
Q ss_pred eEEEEEecCCCEEEEecC-CC--eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-
Q psy10662 133 KNFVGLATDGDYVACGSE-NN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ- 208 (221)
Q Consensus 133 v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 208 (221)
+. .|+++++.|+.... ++ .|++|++..+ ....+.+ .....+..+.++++++.|+....+
T Consensus 330 ~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~--------------p~~~~~~~~~~~~d~~~l~~~~ss~ 392 (693)
T 3iuj_A 330 VL--TVHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVAL--------------PGLGSVSGFNGKHDDPALYFGFENY 392 (693)
T ss_dssp CE--EEEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECC--------------SSSSEEEECCCCTTCSCEEEEEECS
T ss_pred EE--EEEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeec--------------CCCceEEeeecCCCCCEEEEEecCC
Confidence 43 88999988776665 43 6888887633 2222211 123356677788888766655433
Q ss_pred ---CeEEEEECCccc
Q psy10662 209 ---GIIKIYVIPIRV 220 (221)
Q Consensus 209 ---g~i~iw~~~~~~ 220 (221)
+.+..||+.+++
T Consensus 393 ~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 393 AQPPTLYRFEPKSGA 407 (693)
T ss_dssp SSCCEEEEECTTTCC
T ss_pred CCCCEEEEEECCCCe
Confidence 789999987664
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.11 E-value=3.3e-09 Score=81.61 Aligned_cols=206 Identities=10% Similarity=-0.068 Sum_probs=122.7
Q ss_pred CCCceEEEEe------------------CCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-CcEEEecCCC------
Q psy10662 1 MNSCHLAFGS------------------ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-EDIVSASTDS------ 55 (221)
Q Consensus 1 ~~~~~l~~~~------------------~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~l~s~~~d~------ 55 (221)
|++.++.+++ .++.+.+.|.+ +.+...++.--. ....++++|+ +++++++.+.
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~-t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i 222 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDAD-KWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTL 222 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETT-TTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSH
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECC-CCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcch
Confidence 5777777774 34679999998 677777776422 4456667764 4455554332
Q ss_pred --------------------------------cEEEEEcCC--Ccc-ceeeeccccceeEEEEeCCCCEEEE-ecCCCeE
Q psy10662 56 --------------------------------QLKLWNINK--PNC-LRSFVGHINDKNFVGLATDGDYVAC-GSENNSL 99 (221)
Q Consensus 56 --------------------------------~v~~wd~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v 99 (221)
.|.+.|.++ ++. +..+.. .....++.++|||+++++ +..+.+|
T Consensus 223 ~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~V 301 (595)
T 1fwx_A 223 PEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTV 301 (595)
T ss_dssp HHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBE
T ss_pred hhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeE
Confidence 467777766 434 344432 335678999999997654 4568899
Q ss_pred EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC----------Cceeeee
Q psy10662 100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS----------KHMHAYR 169 (221)
Q Consensus 100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~----------~~~~~~~ 169 (221)
.++|+.+.+....-..+.. ....... .-......++|+|+|...++...|+.|.+||+... ..+..+.
T Consensus 302 sVid~~~~~~~~~~~l~~~-~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid 379 (595)
T 1fwx_A 302 TVLDVTRFDAVFYENADPR-SAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD 379 (595)
T ss_dssp EEEEGGGHHHHHHSCCCGG-GGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE
T ss_pred EEEECcccccccccccCcc-cceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee
Confidence 9999986531100000000 1111111 22345778999999955566778999999998762 2222221
Q ss_pred eecccccccccccccccccceeEEEEcCCCcEEEEecC---CCe----------EEEEECCcccC
Q psy10662 170 FDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS---QGI----------IKIYVIPIRVL 221 (221)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~----------i~iw~~~~~~l 221 (221)
.. ...+|...-..+.++|||++|+++.. |.. -.++|+.++++
T Consensus 380 V~----------yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 380 VH----------YQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp CS----------SCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred cc----------cccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence 10 00123222234466899999999864 432 17788876653
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.10 E-value=9.2e-08 Score=70.75 Aligned_cols=189 Identities=11% Similarity=-0.019 Sum_probs=116.4
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccce----
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDK---- 78 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v---- 78 (221)
+..+.+++.++.|..+|.. +++.+............... .++.++.++.++.|..+|.++++.+..........
T Consensus 103 ~~~v~v~~~~g~l~a~d~~-tG~~~W~~~~~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTS-DGTVAWQTKVAGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETT-TCCEEEEEECSSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred CCEEEEEcCCCEEEEEECC-CCCEEEEEeCCCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 4567778889999999997 67777666543322212222 36678888999999999999998876654322111
Q ss_pred -eEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeeccccee-EeeEE-EeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662 79 -NFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSML-ESSFV-GHINDKNFVGLATDGDYVACGSENNSLY 155 (221)
Q Consensus 79 -~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 155 (221)
...... +..++.++.++.+..+|..+++.+............ ...+. ....+ .. .+..+++++.++.+.
T Consensus 181 ~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p----~~--~~~~v~~~~~~g~l~ 252 (376)
T 3q7m_A 181 ESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTP----VV--VNGVVFALAYNGNLT 252 (376)
T ss_dssp CCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCC----EE--ETTEEEEECTTSCEE
T ss_pred CCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCc----EE--ECCEEEEEecCcEEE
Confidence 122222 456778888999999999999887665322110000 00000 00001 11 245677778899999
Q ss_pred EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.+|..+++.+..... .....+.. ++..|+.++.++.+..+|..+++
T Consensus 253 ~~d~~tG~~~w~~~~-----------------~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 253 ALDLRSGQIMWKREL-----------------GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp EEETTTCCEEEEECC-----------------CCEEEEEE--ETTEEEEEETTCCEEEEETTTCC
T ss_pred EEECCCCcEEeeccC-----------------CCCCCceE--ECCEEEEEcCCCeEEEEECCCCc
Confidence 999988876543321 11223333 35667777788899999988775
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.10 E-value=5.3e-07 Score=63.47 Aligned_cols=188 Identities=8% Similarity=-0.008 Sum_probs=112.2
Q ss_pred CceEEEEeCCCeEEEEEecCCcee----eEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeecccc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEA----LAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVGHIN 76 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~----~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~ 76 (221)
|.+|..+. .+.|+.++++..... ...+......+..++|++ ++.|+ +-..++.|..+++........+.....
T Consensus 1 ~~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 1 GTHLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp CEEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred CcEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 34566655 358999998732211 112222234578999997 45554 555678999999876544333322224
Q ss_pred ceeEEEEeCCCCE-EEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC---CC
Q psy10662 77 DKNFVGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE---NN 152 (221)
Q Consensus 77 ~v~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~ 152 (221)
....++++|++.. +++-...+.|.++++..... ..+ ..........++++|++..|..+.. .+
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~------------~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~ 146 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVL------------FDTGLVNPRGIVTDPVRGNLYWTDWNRDNP 146 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE------------ECSSCSSEEEEEEETTTTEEEEEECCSSSC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEE------------EECCCCCccEEEEeeCCCEEEEEECCCCCc
Confidence 5789999997554 45556678899998864322 111 0111245678999996655554443 36
Q ss_pred eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEE-ecCCCeEEEEECCcc
Q psy10662 153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA-ANSQGIIKIYVIPIR 219 (221)
Q Consensus 153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iw~~~~~ 219 (221)
.|..+++..... ..+. . ........++++|++..|+. -...+.|..+++.++
T Consensus 147 ~I~~~~~dg~~~-~~~~------------~--~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 147 KIETSHMDGTNR-RILA------------Q--DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp EEEEEETTSCCC-EEEE------------C--TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred EEEEEecCCCCc-EEEE------------E--CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 788887653221 1110 0 11124678999998765544 445789999998753
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.09 E-value=1.1e-08 Score=74.20 Aligned_cols=175 Identities=13% Similarity=0.042 Sum_probs=111.8
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL 83 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~ 83 (221)
..|..++.++.|..+|.. ++.......+...+.++...+++.++.++.++.+..+|.. ++....+......+.++..
T Consensus 108 ~~l~v~t~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD--GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp TEEEEECTTSEEEEECTT--SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred CEEEEEecCCEEEEEcCC--CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 456677788889999876 4455555545555666776767788889989999999988 7766666544556777778
Q ss_pred eCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCC
Q psy10662 84 ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK 163 (221)
Q Consensus 84 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 163 (221)
.+++.+++.. +.|..+| .+++....+ ......+.++...+++. |.+++.++.+..+|. +++
T Consensus 185 d~~g~l~v~t---~~l~~~d-~~g~~~~~~-------------~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~ 245 (330)
T 3hxj_A 185 GKDGTIYFGS---DKVYAIN-PDGTEKWNF-------------YAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGT 245 (330)
T ss_dssp CTTCCEEEES---SSEEEEC-TTSCEEEEE-------------CCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSC
T ss_pred cCCCEEEEEe---CEEEEEC-CCCcEEEEE-------------ccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCC
Confidence 7777755544 6788999 666655433 11224466777788775 445666777888873 444
Q ss_pred ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662 164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 216 (221)
....+. . ....+..+.+.+++. |..++.+|.|..+|.
T Consensus 246 ~~~~~~--~-------------~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 246 EKWRFK--T-------------GKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp EEEEEE--C-------------SSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred EeEEee--C-------------CCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 333222 1 111122344555554 555666777777774
No 243
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.08 E-value=2.1e-08 Score=74.16 Aligned_cols=103 Identities=8% Similarity=-0.094 Sum_probs=75.0
Q ss_pred cEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec----------CCCeEEEEECCCCeeeEEEEeecccceeEee
Q psy10662 56 QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS----------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESS 125 (221)
Q Consensus 56 ~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 125 (221)
.|.++|..+++.+..+.....+ .++++|++++++.+. .++.|.+||..+.+.+..+..... . .
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~-~----~ 120 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA-P----R 120 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc-c----c
Confidence 8899999999888777544333 999999999887775 367899999998888766521100 0 0
Q ss_pred EEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCCCCceee
Q psy10662 126 FVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHA 167 (221)
Q Consensus 126 ~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~ 167 (221)
.. .......++|+|+|++|++++. ++.|.++| .+++....
T Consensus 121 ~~-~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 121 FD-VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred cc-cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 00 0123457899999999998874 47899999 88876655
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.06 E-value=1.8e-07 Score=64.28 Aligned_cols=168 Identities=8% Similarity=0.037 Sum_probs=110.3
Q ss_pred eeeEEEEecc--CceEEEEEecCCcEEEecCCC--cEEEEEcCCCccceeeeccccceeEEEEeCCCC-EEEEecCCCeE
Q psy10662 25 EALAVFKGHR--KAVSYVKFLNKEDIVSASTDS--QLKLWNINKPNCLRSFVGHINDKNFVGLATDGD-YVACGSENNSL 99 (221)
Q Consensus 25 ~~~~~~~~~~--~~i~~~~~~~~~~l~s~~~d~--~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v 99 (221)
+.+.++. |. .....+.|+++..+.+.+.+| .|+.+|+.+++.+..+.-.. ........+.++ +....-.++.+
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEcC-CCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEE
Confidence 4555663 54 347799999865566777754 89999999999988775332 222222222344 44555678999
Q ss_pred EEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccc
Q psy10662 100 YIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLER 179 (221)
Q Consensus 100 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 179 (221)
.+||..+.+.+.++... ..- ..+.++++.|+.+..++.|.++|..+.+.+..+........
T Consensus 88 ~v~D~~tl~~~~ti~~~--------------~~G--wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~--- 148 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYP--------------GEG--WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRP--- 148 (243)
T ss_dssp EEEETTTTEEEEEEECS--------------SCC--CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEE---
T ss_pred EEEECCcCcEEEEEeCC--------------CCc--eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcc---
Confidence 99999999998876321 112 23346677777777789999999999888777753321110
Q ss_pred cccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcccC
Q psy10662 180 DRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRVL 221 (221)
Q Consensus 180 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~l 221 (221)
-..++.+.+. +|+..+..-.+..|.+.|..++++
T Consensus 149 -------~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 149 -------LDNLNELEWV-NGELLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp -------CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBE
T ss_pred -------cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCE
Confidence 1234556664 666555554677899999888764
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.03 E-value=3.9e-08 Score=71.22 Aligned_cols=177 Identities=11% Similarity=0.033 Sum_probs=114.0
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL 83 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~ 83 (221)
..|..++.++.|..+|.. ++....+......+.++...+++.+..++ +.+..+| .+++....+......+.++..
T Consensus 148 g~l~vgt~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~ 222 (330)
T 3hxj_A 148 GTIYVGSNDNYLYAINPD--GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAI 222 (330)
T ss_dssp SCEEEECTTSEEEEECTT--SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEE
T ss_pred CEEEEEcCCCEEEEECCC--CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEE
Confidence 346667788999999976 55555555555667777776677777777 8899999 677666655545566888888
Q ss_pred eCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCC
Q psy10662 84 ATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSK 163 (221)
Q Consensus 84 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 163 (221)
.+++. +..++.++.+..+|. +++.+..+ ......+..+.+.+++ .|.+++.+|.+..+|. +++
T Consensus 223 ~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~-------------~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 223 SEDGT-IYVTSLDGHLYAINP-DGTEKWRF-------------KTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGT 285 (330)
T ss_dssp CTTSC-EEEEETTTEEEEECT-TSCEEEEE-------------ECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSC
T ss_pred CCCCe-EEEEcCCCeEEEECC-CCCEeEEe-------------eCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCc
Confidence 88775 444556777888874 44444332 1111222334455555 4666778888999985 555
Q ss_pred ceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 164 HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
....+.. ....+.++...++|+ |..++.+|.+++...+.
T Consensus 286 ~~~~~~~---------------~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 286 EKWNFET---------------GSWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EEEEEEC---------------SSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred EEEEEEc---------------CCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 4433321 123456677777776 55577899999887764
No 246
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.00 E-value=1.3e-06 Score=61.41 Aligned_cols=186 Identities=5% Similarity=-0.064 Sum_probs=107.1
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeeccccceeEE
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDKNFV 81 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~ 81 (221)
.++++-..++.|..+++. .......+.........+++.+ ++.++ +-...+.|.++++..................+
T Consensus 49 ~ly~~d~~~~~I~~~~~~-g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i 127 (267)
T 1npe_A 49 VVYWTDISEPSIGRASLH-GGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGI 127 (267)
T ss_dssp EEEEEETTTTEEEEEESS-SCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred EEEEEECCCCEEEEEecC-CCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEE
Confidence 344444456788888886 3332222222224678999997 45544 55567899999986433222222122456889
Q ss_pred EEeCCCCEEEEec-C--CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EEecCCCeEEEE
Q psy10662 82 GLATDGDYVACGS-E--NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-ACGSENNSLYIY 157 (221)
Q Consensus 82 ~~~~~~~~l~~~~-~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~ 157 (221)
+++|++..+..+. . .+.|..+++.... ...+ ..........++++|++..| ++-...+.|..+
T Consensus 128 ~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~------------~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 128 VTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRIL------------AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEE------------ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEE------------EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 9999655544333 2 4678888765322 1111 00112357789999987655 444556889999
Q ss_pred EcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 158 YKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 158 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
|........... . ......++.. .+.++++....+.|..++..+++
T Consensus 195 ~~~g~~~~~~~~---------------~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 195 NPAQPGRRKVLE---------------G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp ETTEEEEEEEEE---------------C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTE
T ss_pred ecCCCceEEEec---------------C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCC
Confidence 986432211110 0 1122456654 44455555567899999988764
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.99 E-value=9e-07 Score=64.07 Aligned_cols=184 Identities=8% Similarity=-0.025 Sum_probs=113.0
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEe--------------------ccCceEEEEEec-CCcEEEecCCCcEEE
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKG--------------------HRKAVSYVKFLN-KEDIVSASTDSQLKL 59 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~--------------------~~~~i~~~~~~~-~~~l~s~~~d~~v~~ 59 (221)
++++++.++..++.|..|+.. ++. +..+.. ....+..+++.+ ++.|+.+...+.+..
T Consensus 28 ~~g~~l~v~~~~~~i~~~~~~-~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~ 105 (322)
T 2fp8_A 28 STNKGFYTSVQDGRVIKYEGP-NSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSV 105 (322)
T ss_dssp TTCSSEEEECTTSEEEEECCT-TTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred CCCCEEEEEcCCCeEEEECCC-CCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEE
Confidence 456778888888999999876 332 222321 113578899996 777777766666888
Q ss_pred EEcCCCccceeeec-----cccceeEEEEeC-CCCEEEEecC-----------------CCeEEEEECCCCeeeEEEEee
Q psy10662 60 WNINKPNCLRSFVG-----HINDKNFVGLAT-DGDYVACGSE-----------------NNSLYIYYKGLSKHMHAYRFD 116 (221)
Q Consensus 60 wd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~v~iwd~~~~~~~~~~~~~ 116 (221)
+|..+++. ..+.. .......+++.+ +|.+.++-.. ++.|..+|..+++....
T Consensus 106 ~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~---- 180 (322)
T 2fp8_A 106 VGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL---- 180 (322)
T ss_dssp ECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE----
T ss_pred EeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe----
Confidence 88765532 22211 112467899999 8887665432 36688888765543211
Q ss_pred cccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCc--eeeeeeecccccccccccccccccceeEE
Q psy10662 117 TVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKH--MHAYRFDTVRSMLERDRNEDDTNEFVSAV 193 (221)
Q Consensus 117 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 193 (221)
.........++++|+++.|+++ ...+.|..|++..... ...+. .. .. ...+
T Consensus 181 ----------~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~------------~~---~g-P~gi 234 (322)
T 2fp8_A 181 ----------LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV------------KI---PN-PGNI 234 (322)
T ss_dssp ----------EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE------------EC---SS-EEEE
T ss_pred ----------ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE------------eC---CC-CCCe
Confidence 1222345679999999866554 5668999999875321 11110 01 11 5678
Q ss_pred EEcCCCcEEEEecC----------CCeEEEEECC
Q psy10662 194 CWRQLSRVLVAANS----------QGIIKIYVIP 217 (221)
Q Consensus 194 ~~~~~~~~l~~~~~----------dg~i~iw~~~ 217 (221)
+++++|++.++... .+.|..++..
T Consensus 235 ~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 235 KRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp EECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred EECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 88999886666543 3556666543
No 248
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.96 E-value=2.1e-08 Score=75.03 Aligned_cols=142 Identities=9% Similarity=-0.086 Sum_probs=94.5
Q ss_pred CcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec----------CCCeEEEEECCCCeeeEEEEeecccceeEe
Q psy10662 55 SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS----------ENNSLYIYYKGLSKHMHAYRFDTVRSMLES 124 (221)
Q Consensus 55 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 124 (221)
+.|.++|..+.+.+..+..-..+ .+.++|++++++++. .++.|.++|..+.+.+.++.......
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r---- 172 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR---- 172 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC----
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc----
Confidence 79999999999999888655555 899999999877665 46789999999999887763210000
Q ss_pred eEEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEE
Q psy10662 125 SFVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL 202 (221)
Q Consensus 125 ~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 202 (221)
+ ........+.|+|||++++++.. ++.|.+.|+.+.+.+..+..... . ... ....-.-+.++++|+++
T Consensus 173 -~-~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~------~-~~~-p~g~~~~v~~~~dG~~~ 242 (426)
T 3c75_H 173 -F-LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC------Y-HIF-PASPTVFYMNCRDGSLA 242 (426)
T ss_dssp -C-CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE------E-EEE-EEETTEEEEEETTSSEE
T ss_pred -c-ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc------e-eec-cCCCcEEEEEcCCCCEE
Confidence 0 00123456889999999998874 57899999999988777653110 0 000 00011224566777766
Q ss_pred EEecCCCeEE
Q psy10662 203 VAANSQGIIK 212 (221)
Q Consensus 203 ~~~~~dg~i~ 212 (221)
+....++.+.
T Consensus 243 ~V~~~~~~v~ 252 (426)
T 3c75_H 243 RVDFADGETK 252 (426)
T ss_dssp EEECCTTCCE
T ss_pred EEECCCCcEE
Confidence 6655555443
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=2.2e-07 Score=73.96 Aligned_cols=192 Identities=10% Similarity=0.066 Sum_probs=118.6
Q ss_pred CCeEEEEEecCCceeeEEEEeccC-------------------------------ceEEEEEec-CCcEEEecCCC----
Q psy10662 12 DHCVHYYDLRNTKEALAVFKGHRK-------------------------------AVSYVKFLN-KEDIVSASTDS---- 55 (221)
Q Consensus 12 dg~i~i~~~~~~~~~~~~~~~~~~-------------------------------~i~~~~~~~-~~~l~s~~~d~---- 55 (221)
+|.|..+|.. +++.+..+..... ....+++.+ .+.++.+..++
T Consensus 177 ~g~v~a~D~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~ 255 (668)
T 1kv9_A 177 RGFVSAYDAD-TGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWN 255 (668)
T ss_dssp BCEEEEEETT-TCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECC-CCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccc
Confidence 5899999998 7887777652110 012356766 45666776665
Q ss_pred ---------------cEEEEEcCCCccceeeec--cc-------cceeEEEEeCCCC---EEEEecCCCeEEEEECCCCe
Q psy10662 56 ---------------QLKLWNINKPNCLRSFVG--HI-------NDKNFVGLATDGD---YVACGSENNSLYIYYKGLSK 108 (221)
Q Consensus 56 ---------------~v~~wd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~v~iwd~~~~~ 108 (221)
.|..+|.++++.+-.++. |. .+.....+..+++ .++.++.+|.+.++|..+++
T Consensus 256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 256 REVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 399999999998876643 21 2223333334665 68899999999999999999
Q ss_pred eeEEEEeeccc---------ceeEee------------EEEeeC--ceEEEEEecCCCEEEEe-----------------
Q psy10662 109 HMHAYRFDTVR---------SMLESS------------FVGHIN--DKNFVGLATDGDYVACG----------------- 148 (221)
Q Consensus 109 ~~~~~~~~~~~---------~~~~~~------------~~~~~~--~v~~~~~~~~~~~l~~~----------------- 148 (221)
.+....+.... ...+.. ..+..+ .-..++++|+..++++.
T Consensus 336 ~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~ 415 (668)
T 1kv9_A 336 LISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVT 415 (668)
T ss_dssp EEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCC
T ss_pred EeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccc
Confidence 98665433211 111000 000000 00125677766655431
Q ss_pred -------------------cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC
Q psy10662 149 -------------------SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG 209 (221)
Q Consensus 149 -------------------~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 209 (221)
..+|.|..||+.+++.+-.+... .......+...+.+++.++.||
T Consensus 416 ~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~----------------~~~~~~~~~t~gg~vf~g~~dg 479 (668)
T 1kv9_A 416 RKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP----------------THWNGGTLSTAGNLVFQGTAAG 479 (668)
T ss_dssp CSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES----------------SSCCCCEEEETTTEEEEECTTS
T ss_pred ccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC----------------CCCcCceeEeCCCEEEEECCcc
Confidence 13478889999888766444311 1122233445678899999999
Q ss_pred eEEEEECCccc
Q psy10662 210 IIKIYVIPIRV 220 (221)
Q Consensus 210 ~i~iw~~~~~~ 220 (221)
.++.||..+|+
T Consensus 480 ~l~a~d~~tG~ 490 (668)
T 1kv9_A 480 QMHAYSADKGE 490 (668)
T ss_dssp EEEEEETTTCC
T ss_pred cchhhhhhcCh
Confidence 99999999886
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.93 E-value=1.6e-07 Score=74.69 Aligned_cols=163 Identities=14% Similarity=0.153 Sum_probs=104.2
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEecc----CceEEEEEecCCcEEEecC------CCcEEEEEcCCCccceeee
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHR----KAVSYVKFLNKEDIVSAST------DSQLKLWNINKPNCLRSFV 72 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~l~s~~~------d~~v~~wd~~~~~~~~~~~ 72 (221)
+..+++++.|+.|..+|.. +++.+..+.... ..+.+--.-.++.++.+.. +|.|..+|.++++.+-.+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~-tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAK-TGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETT-TCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECC-CCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 4567788889999999998 787777766421 1111100011556665543 5899999999998876653
Q ss_pred ccc-------------------------------cceeEEEEeCCCCEEEEecCCC-------------------eEEEE
Q psy10662 73 GHI-------------------------------NDKNFVGLATDGDYVACGSENN-------------------SLYIY 102 (221)
Q Consensus 73 ~~~-------------------------------~~v~~~~~~~~~~~l~~~~~d~-------------------~v~iw 102 (221)
... .....+++.|+..+++.++.++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 210 0112468888888888887766 39999
Q ss_pred ECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC---EEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662 103 YKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD---YVACGSENNSLYIYYKGLSKHMHAYRF 170 (221)
Q Consensus 103 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~ 170 (221)
|..+++.+..++....... .+ ....+.....+..+|+ .++.++.+|.++++|..+++.+....+
T Consensus 276 D~~tG~~~W~~~~~~~~~w---d~-~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~ 342 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSW---DF-TATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKF 342 (668)
T ss_dssp CTTTCCEEEEEESSTTCCS---CC-CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEES
T ss_pred cCCCCceeeEeecCCCccc---cc-cCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccc
Confidence 9999998877642211000 00 0012222233334665 688999999999999999998865543
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.87 E-value=6.9e-07 Score=69.80 Aligned_cols=150 Identities=9% Similarity=-0.009 Sum_probs=89.6
Q ss_pred cEEEEEcCCCccceeeecc--c-------cceeEEEEeCCCC---EEEEecCCCeEEEEECCCCeeeEEEEeecc-----
Q psy10662 56 QLKLWNINKPNCLRSFVGH--I-------NDKNFVGLATDGD---YVACGSENNSLYIYYKGLSKHMHAYRFDTV----- 118 (221)
Q Consensus 56 ~v~~wd~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~---~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~----- 118 (221)
.|..+|.++++.+-.++.. . ....-+...++|+ .++.++.+|.+.++|..+++.+....+...
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 5999999999887666421 1 1111122334674 577888999999999999999887654321
Q ss_pred -----cceeEee--------------EEEeeC--ceEEEEEecCCCEEEEec----------------------------
Q psy10662 119 -----RSMLESS--------------FVGHIN--DKNFVGLATDGDYVACGS---------------------------- 149 (221)
Q Consensus 119 -----~~~~~~~--------------~~~~~~--~v~~~~~~~~~~~l~~~~---------------------------- 149 (221)
...++.. ..+..+ .-..++++|+..++++..
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 1111100 000000 002457788777666553
Q ss_pred ---------CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 150 ---------ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 150 ---------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.+|.|..||+.+++.+-.+... ..+....+...+..++.++.||.|+.+|..+|+
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~----------------~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK----------------FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEES----------------SCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecCC----------------CCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 3467888888877765444311 111122222346677778999999999999886
Q ss_pred C
Q psy10662 221 L 221 (221)
Q Consensus 221 l 221 (221)
+
T Consensus 497 ~ 497 (571)
T 2ad6_A 497 E 497 (571)
T ss_dssp E
T ss_pred E
Confidence 3
No 252
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.77 E-value=2.4e-06 Score=67.00 Aligned_cols=104 Identities=10% Similarity=0.057 Sum_probs=67.9
Q ss_pred CCCeEEEEEecCCceeeEEEEeccCc-------------------------------------e-EEEEEec-CCcEEEe
Q psy10662 11 ADHCVHYYDLRNTKEALAVFKGHRKA-------------------------------------V-SYVKFLN-KEDIVSA 51 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~~~~~~-------------------------------------i-~~~~~~~-~~~l~s~ 51 (221)
.+|.|+.+|.. +++.+..+...... + ..+++.+ .+.++.+
T Consensus 180 ~~g~v~A~D~~-TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g 258 (599)
T 1w6s_A 180 VRGYLTAYDVK-TGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFG 258 (599)
T ss_dssp CCCEEEEEETT-TCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEE
T ss_pred CCCeEEEEECC-CCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEe
Confidence 37899999998 77777766532211 0 1234443 4555555
Q ss_pred cCC----------------CcEEEEEcCCCccceeeecccc---------ceeEEEEe-CCC---CEEEEecCCCeEEEE
Q psy10662 52 STD----------------SQLKLWNINKPNCLRSFVGHIN---------DKNFVGLA-TDG---DYVACGSENNSLYIY 102 (221)
Q Consensus 52 ~~d----------------~~v~~wd~~~~~~~~~~~~~~~---------~v~~~~~~-~~~---~~l~~~~~d~~v~iw 102 (221)
..+ +.|..+|.++++.+-.++.... ...-+... .+| ..++.++.+|.+.++
T Consensus 259 ~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~l 338 (599)
T 1w6s_A 259 TGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTL 338 (599)
T ss_dssp CCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEE
T ss_pred CCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEE
Confidence 544 3799999999988766643211 11112222 467 467778999999999
Q ss_pred ECCCCeeeEEEEe
Q psy10662 103 YKGLSKHMHAYRF 115 (221)
Q Consensus 103 d~~~~~~~~~~~~ 115 (221)
|.++++.+....+
T Consensus 339 D~~tG~~lw~~~~ 351 (599)
T 1w6s_A 339 DRTDGALVSANKL 351 (599)
T ss_dssp ETTTCCEEEEEES
T ss_pred ECCCCCEeecccc
Confidence 9999999887654
No 253
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.75 E-value=3.1e-06 Score=66.40 Aligned_cols=159 Identities=11% Similarity=0.116 Sum_probs=99.0
Q ss_pred EEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEE-EEEecCCcEEEec------CCCcEEEEEcCCCccceeeecc
Q psy10662 6 LAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSY-VKFLNKEDIVSAS------TDSQLKLWNINKPNCLRSFVGH 74 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~-~~~~~~~~l~s~~------~d~~v~~wd~~~~~~~~~~~~~ 74 (221)
|+.++.|+.|.-+|.. +++.+........ .+.+ ... .++.++.++ .++.|+.+|.++++.+-.+...
T Consensus 124 V~v~t~dg~l~AlDa~-TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAE-TGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETT-TCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECC-CCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7888889999999997 6777766543220 1211 111 155666655 3899999999999887655322
Q ss_pred ccc-------------------------------------e-eEEEEeCCCCEEEEecCC----------------CeEE
Q psy10662 75 IND-------------------------------------K-NFVGLATDGDYVACGSEN----------------NSLY 100 (221)
Q Consensus 75 ~~~-------------------------------------v-~~~~~~~~~~~l~~~~~d----------------~~v~ 100 (221)
... + ...++.++..+++.+..+ +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 110 0 134566777777766554 3799
Q ss_pred EEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe-cCC---CEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662 101 IYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA-TDG---DYVACGSENNSLYIYYKGLSKHMHAYRF 170 (221)
Q Consensus 101 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 170 (221)
.+|.++++.+..++....... .+.....++ -+... .+| ..++.++.+|.++++|.++++.+....+
T Consensus 282 Ald~~TG~~~W~~q~~~~d~w---d~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 351 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEW---DYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKL 351 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSS---CCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred EEeCCCCceeeEeecCCCccc---cccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccc
Confidence 999999998876632211000 000111111 12222 467 4677889999999999999998876654
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.74 E-value=3.5e-06 Score=65.89 Aligned_cols=163 Identities=10% Similarity=0.080 Sum_probs=99.2
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEE-EEEecCCcEEEecC------CCcEEEEEcCCCccceee
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSY-VKFLNKEDIVSAST------DSQLKLWNINKPNCLRSF 71 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~-~~~~~~~~l~s~~~------d~~v~~wd~~~~~~~~~~ 71 (221)
+..+++++.|+.|..+|.. +++.+........ .+.+ ... .++.++.++. ++.|..+|.++++.+-.+
T Consensus 115 ~~~v~v~~~dg~l~alD~~-tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAK-TGKINWEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETT-TCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECC-CCCEEEEecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 4567778889999999997 6777766553210 1211 111 1556666554 799999999999887655
Q ss_pred eccccc--------------------------------------eeEEEEeCCCCEEEEecCC----------------C
Q psy10662 72 VGHIND--------------------------------------KNFVGLATDGDYVACGSEN----------------N 97 (221)
Q Consensus 72 ~~~~~~--------------------------------------v~~~~~~~~~~~l~~~~~d----------------~ 97 (221)
...... ...+++.++...++.+..+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 321110 0235666766666555432 3
Q ss_pred eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCC---EEEEecCCCeEEEEEcCCCCceeeeeee
Q psy10662 98 SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGD---YVACGSENNSLYIYYKGLSKHMHAYRFD 171 (221)
Q Consensus 98 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 171 (221)
.|..+|.++++.+..++....... .+.....++ .+...++|+ .++.++.+|.++++|..+++.+..+.+.
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~---d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~ 345 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEW---DFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD 345 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSS---CCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred EEEEEecCCCcEEEEecCCCCccc---ccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence 589999999998876532210000 000011111 233335774 6778889999999999999887766543
No 255
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.73 E-value=2.1e-05 Score=56.98 Aligned_cols=190 Identities=12% Similarity=0.143 Sum_probs=112.8
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecC-----Cc--EE--EecC--CCcEEEEEcC--CCccce
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNK-----ED--IV--SAST--DSQLKLWNIN--KPNCLR 69 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~--l~--s~~~--d~~v~~wd~~--~~~~~~ 69 (221)
..+++.....+-+.+||+. ++.++.+.. +.++.+..-|+ .. ++ +.-. +++|.+|++. +++ +.
T Consensus 40 ~s~ii~t~k~~gL~Vydl~--G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLD--GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GCEEEEEETTTEEEEEETT--SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred ccEEEEEcCCCCEEEEcCC--CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 4556666788899999995 666776653 55666665542 11 33 3333 5789999773 332 33
Q ss_pred eeec------cc-cceeEEEE--eCC-CC-EEEEecCCCeEEEEECC---CCeeeEEEEeecccceeEeeEEEeeCceEE
Q psy10662 70 SFVG------HI-NDKNFVGL--ATD-GD-YVACGSENNSLYIYYKG---LSKHMHAYRFDTVRSMLESSFVGHINDKNF 135 (221)
Q Consensus 70 ~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 135 (221)
.+.. .. ..+..+++ +|. +. ++++...+|.+..|++. .++.. .+.++++. ..+.+-.
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~---------~~lVR~f~-lgsq~Eg 184 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYIS---------GKKVRAFK-MNSQTEG 184 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEE---------EEEEEEEE-CSSCEEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCccc---------ceEEEEec-CCCCcce
Confidence 3311 11 45667777 664 43 67888889999999873 22111 11222222 2356778
Q ss_pred EEEecCCCEEEEecCCCeEEEEEcCCCC--ceeeeeeecccccccccccccccccceeEEEE--cCCCc-EEEEec-CCC
Q psy10662 136 VGLATDGDYVACGSENNSLYIYYKGLSK--HMHAYRFDTVRSMLERDRNEDDTNEFVSAVCW--RQLSR-VLVAAN-SQG 209 (221)
Q Consensus 136 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l~~~~-~dg 209 (221)
|...+....|+.+-++.-|..++.+... ....+. .. ....-...+..+++ .++++ ||++++ .++
T Consensus 185 cvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~---------~~-~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 185 MAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVID---------RA-DGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp EEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEE---------EB-SSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred EEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEE---------Ee-cCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 8899988899999998776666654222 101111 00 01111224666776 55555 666666 688
Q ss_pred eEEEEECC
Q psy10662 210 IIKIYVIP 217 (221)
Q Consensus 210 ~i~iw~~~ 217 (221)
...+|+.+
T Consensus 255 s~~Vydr~ 262 (355)
T 3amr_A 255 SYAIYDRQ 262 (355)
T ss_dssp EEEEEESS
T ss_pred EEEEEECC
Confidence 99999986
No 256
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.72 E-value=1.6e-06 Score=67.90 Aligned_cols=61 Identities=15% Similarity=0.091 Sum_probs=44.0
Q ss_pred CcEEEEEcCCCccceeeec--cc--------cceeEEEEe-CCCC---EEEEecCCCeEEEEECCCCeeeEEEEee
Q psy10662 55 SQLKLWNINKPNCLRSFVG--HI--------NDKNFVGLA-TDGD---YVACGSENNSLYIYYKGLSKHMHAYRFD 116 (221)
Q Consensus 55 ~~v~~wd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~~~~~d~~v~iwd~~~~~~~~~~~~~ 116 (221)
+.|..+|.++++.+-.++. |. .++ -+... .+|+ .++.++.+|.+.++|.++++.+..+.+.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccc
Confidence 5899999999998876642 21 111 12222 4664 6888999999999999999998877553
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.69 E-value=2.9e-05 Score=56.11 Aligned_cols=184 Identities=10% Similarity=0.025 Sum_probs=105.5
Q ss_pred eEEEEeCCCeEEEEEecCCceeeEEEEe-----ccCceEEEEEec-CCcEEEecC------------------CCcEEEE
Q psy10662 5 HLAFGSADHCVHYYDLRNTKEALAVFKG-----HRKAVSYVKFLN-KEDIVSAST------------------DSQLKLW 60 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~i~~~~~~~-~~~l~s~~~------------------d~~v~~w 60 (221)
.|.++...+.|..+|.. ++. +..+.. .......+++.+ ++.+..+.. ++.|..+
T Consensus 93 ~l~v~d~~~~i~~~d~~-~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 93 QLYIVDCYYHLSVVGSE-GGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp EEEEEETTTEEEEECTT-CEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred cEEEEECCCCEEEEeCC-CCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 34444444557777755 332 222221 113467888888 777665432 3678888
Q ss_pred EcCCCccceeeeccccceeEEEEeCCCCEEE-EecCCCeEEEEECCCCee--eEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662 61 NINKPNCLRSFVGHINDKNFVGLATDGDYVA-CGSENNSLYIYYKGLSKH--MHAYRFDTVRSMLESSFVGHINDKNFVG 137 (221)
Q Consensus 61 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 137 (221)
|..+++...... .......++++|+++.+. +-+..+.|.+|++..... ...+ ..... ...++
T Consensus 171 d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~-------------~~~~g-P~gi~ 235 (322)
T 2fp8_A 171 DPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVL-------------VKIPN-PGNIK 235 (322)
T ss_dssp ETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEE-------------EECSS-EEEEE
T ss_pred eCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceE-------------EeCCC-CCCeE
Confidence 876665432222 223457799999998554 446678899999874311 1111 11122 67789
Q ss_pred EecCCCEEEEecC----------CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC
Q psy10662 138 LATDGDYVACGSE----------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS 207 (221)
Q Consensus 138 ~~~~~~~l~~~~~----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 207 (221)
++++|++.++... .+.|..+|.. ++.+..+.... + .....+..+++ .++++.++...
T Consensus 236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~-g----------~~~~~~~~~~~-~~g~L~v~~~~ 302 (322)
T 2fp8_A 236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPP-P----------FAGEHFEQIQE-HDGLLYIGTLF 302 (322)
T ss_dssp ECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCT-T----------TTTSCCCEEEE-ETTEEEEECSS
T ss_pred ECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCC-C----------CccccceEEEE-eCCEEEEeecC
Confidence 9999987666544 4567777753 44444332110 0 00223556666 46776666667
Q ss_pred CCeEEEEECCc
Q psy10662 208 QGIIKIYVIPI 218 (221)
Q Consensus 208 dg~i~iw~~~~ 218 (221)
++.|..+++..
T Consensus 303 ~~~i~~~~~~~ 313 (322)
T 2fp8_A 303 HGSVGILVYDK 313 (322)
T ss_dssp CSEEEEEEC--
T ss_pred CCceEEEeccc
Confidence 88999999864
No 258
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.63 E-value=6.1e-05 Score=56.87 Aligned_cols=199 Identities=9% Similarity=-0.000 Sum_probs=108.3
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCC----c-EEEEEcCCCccc-eeeeccccc
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDS----Q-LKLWNINKPNCL-RSFVGHIND 77 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~----~-v~~wd~~~~~~~-~~~~~~~~~ 77 (221)
..|..+...+.|+.+|+. .+... .+.........+++++++.|+.+...+ . +...+...+... ..+. ....
T Consensus 153 g~Lyv~D~~~~I~~id~~-~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~ 229 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFV-NQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARG 229 (433)
T ss_dssp CEEEEECBTSCEEEEETT-TTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSS
T ss_pred CEEEEEeCCCCEEEEECC-CCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCC
Confidence 344444444788888875 44433 333344568899999865566555422 1 333332211110 1121 2234
Q ss_pred eeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEE-EEecCCCeEE
Q psy10662 78 KNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYV-ACGSENNSLY 155 (221)
Q Consensus 78 v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~ 155 (221)
...++++| ++.++++-..++.|..+|..+++....+. . .+.......++|+|+++.| ++-...+.|+
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~-~----------~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV-M----------MDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE-E----------CSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe-c----------cCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 56788999 67766677778899999987665522220 0 0111223469999999854 4555678899
Q ss_pred EEEcCC--CCceeeeeeecc-ccc-ccccccccccccceeEEEE---------cCCCcEEEEecCCCeEEEEEC
Q psy10662 156 IYYKGL--SKHMHAYRFDTV-RSM-LERDRNEDDTNEFVSAVCW---------RQLSRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 156 ~~d~~~--~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~~~---------~~~~~~l~~~~~dg~i~iw~~ 216 (221)
.++... +.......+... ... ...-......-.....+++ .++|.+.++-...+.|+.++.
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 988653 221100111100 000 0000000011223567899 778888777777888988874
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.63 E-value=9.7e-06 Score=63.52 Aligned_cols=164 Identities=12% Similarity=0.083 Sum_probs=98.7
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceE-EEEEecC---C--cEEEec------CCCcEEEEEcCCCc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVS-YVKFLNK---E--DIVSAS------TDSQLKLWNINKPN 66 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~-~~~~~~~---~--~l~s~~------~d~~v~~wd~~~~~ 66 (221)
+..++.++.|+.|.-+|.. +++.+........ .+. +.....+ + .++.++ .++.|..+|.++++
T Consensus 117 ~~~v~~~t~dg~l~AlD~~-TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKN-TGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp TTEEEEEETTTEEEEEESS-SCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred CCEEEEEeCCCEEEEEECC-CCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 4567778889999999998 7777766653321 111 1111112 1 555554 37899999999988
Q ss_pred cceeeecccc-----------------------------------------ceeEEEEeCCCCEEEEecC----------
Q psy10662 67 CLRSFVGHIN-----------------------------------------DKNFVGLATDGDYVACGSE---------- 95 (221)
Q Consensus 67 ~~~~~~~~~~-----------------------------------------~v~~~~~~~~~~~l~~~~~---------- 95 (221)
.+-....... .-..+++.|+..+++.+..
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 7654422100 0023456676676665442
Q ss_pred ----------C----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe-cCCC---EEEEecCCCeEEEE
Q psy10662 96 ----------N----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA-TDGD---YVACGSENNSLYIY 157 (221)
Q Consensus 96 ----------d----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~---~l~~~~~d~~i~~~ 157 (221)
| +.|..+|..+++.+..++....... .+.....++ -+... .+|+ .++.++.+|.++++
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~w---d~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~l 351 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAW---DFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVV 351 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCS---CCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEE
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcc---cccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEE
Confidence 2 5899999999998877632211000 000111111 12222 4664 78889999999999
Q ss_pred EcCCCCceeeeeee
Q psy10662 158 YKGLSKHMHAYRFD 171 (221)
Q Consensus 158 d~~~~~~~~~~~~~ 171 (221)
|.++++.+..+.+.
T Consensus 352 D~~tG~~lw~~~~~ 365 (582)
T 1flg_A 352 DRSNGKLQNAFPFV 365 (582)
T ss_dssp ETTTCCEEEEEESS
T ss_pred ECCCCCEecccccc
Confidence 99999988776654
No 260
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.61 E-value=7.1e-05 Score=56.46 Aligned_cols=143 Identities=8% Similarity=0.081 Sum_probs=86.3
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCc-EEEecC-CC----cEEEEEcCCCccc--eeeecc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKED-IVSAST-DS----QLKLWNINKPNCL--RSFVGH 74 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~s~~~-d~----~v~~wd~~~~~~~--~~~~~~ 74 (221)
+..|.++...+.|+.+|+. .+.. ..+.........++|++++. |+.+.. ++ .+..++. .+... ..+. .
T Consensus 149 ~g~Lyv~d~~~~I~~id~~-~~~v-~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~ 224 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFE-KEYV-STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-K 224 (430)
T ss_dssp EEEEEEEEBTEEEEEEETT-TTEE-EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-E
T ss_pred CCeEEEEeCCCcEEEEECC-CCEE-EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-c
Confidence 3445555554788888876 4443 33333455688999997554 555543 22 2333443 33222 2222 2
Q ss_pred ccceeEEEEeC-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE-EEEecCCC
Q psy10662 75 INDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY-VACGSENN 152 (221)
Q Consensus 75 ~~~v~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~ 152 (221)
......++++| ++.++++-..++.|..++...+...... . .+.......++|+|++++ +++-...+
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~-----------~-~~~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF-----------T-IQDSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE-----------E-CSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-----------E-cCCCCcceeEEEcCCCCEEEEEECCCC
Confidence 23457888999 6777777777889999998765542111 0 111234678999999995 45555678
Q ss_pred eEEEEEcCC
Q psy10662 153 SLYIYYKGL 161 (221)
Q Consensus 153 ~i~~~d~~~ 161 (221)
.|..++...
T Consensus 293 ~I~~~~~d~ 301 (430)
T 3tc9_A 293 YILRSDYDW 301 (430)
T ss_dssp EEEEEEEET
T ss_pred EEEEEeCCc
Confidence 899988653
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.60 E-value=6.8e-05 Score=55.75 Aligned_cols=178 Identities=8% Similarity=-0.042 Sum_probs=105.1
Q ss_pred CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCC
Q psy10662 11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD 88 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 88 (221)
..+.|+..++. .... ..+......+..++|.+ ++.|+ +-...+.|..+++........+.........+++.+.+.
T Consensus 94 ~~~~I~~i~~~-~~~~-~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g 171 (386)
T 3v65_B 94 NRIDIRQVLPH-RSEY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD 171 (386)
T ss_dssp CBSCEEEECTT-SCCC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT
T ss_pred cCccceeeccC-CCcE-EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC
Confidence 34567777776 3332 22333445688999995 55544 555678899999876543333322233457788887544
Q ss_pred -EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CC-CeEEEEEcCCCCce
Q psy10662 89 -YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-EN-NSLYIYYKGLSKHM 165 (221)
Q Consensus 89 -~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~~~d~~~~~~~ 165 (221)
++++-...+.|.+.++...... .+ ..........++++|.+..|+... .. +.|..+++......
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~~-~l------------~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 238 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHRK-VL------------LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR 238 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSCE-EE------------ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred eEEEEcCCCCeEEEEeCCCCceE-Ee------------ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE
Confidence 5566666778888877643221 11 112234568899998766555444 33 67777776543221
Q ss_pred eeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662 166 HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI 218 (221)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~ 218 (221)
.... ..-...+.++|+|++..|+.+ +..+.|..+++..
T Consensus 239 ~~~~---------------~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 239 IIAD---------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEC---------------SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred EEEE---------------CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 1110 112245789999866655544 4577888888764
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.60 E-value=2.5e-05 Score=62.19 Aligned_cols=109 Identities=10% Similarity=0.054 Sum_probs=65.1
Q ss_pred CCceEEEEeCCC-----------eEEEEEecCCc-eeeEEEEe-ccCceEEEEEec-CCcEEEec-CCCcEEEEEcCCCc
Q psy10662 2 NSCHLAFGSADH-----------CVHYYDLRNTK-EALAVFKG-HRKAVSYVKFLN-KEDIVSAS-TDSQLKLWNINKPN 66 (221)
Q Consensus 2 ~~~~l~~~~~dg-----------~i~i~~~~~~~-~~~~~~~~-~~~~i~~~~~~~-~~~l~s~~-~d~~v~~wd~~~~~ 66 (221)
++++++.|+.++ .+.+||+.+.. ..+..+.. +.....++++.. +..++.|+ .+..+.+||..+.+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 678888887543 57889887322 22223322 223344566665 45566776 35689999987764
Q ss_pred cceeeecc-ccceeEEEEeCCCCEEEEec-CC-----CeEEEEECCCCeee
Q psy10662 67 CLRSFVGH-INDKNFVGLATDGDYVACGS-EN-----NSLYIYYKGLSKHM 110 (221)
Q Consensus 67 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~d-----~~v~iwd~~~~~~~ 110 (221)
....-..+ ...-.+++..+++++++.|+ .+ ..+.+||..+.+..
T Consensus 277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 33221111 11223455667889888888 34 46899999876643
No 263
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.58 E-value=3.5e-07 Score=67.34 Aligned_cols=106 Identities=7% Similarity=-0.078 Sum_probs=76.5
Q ss_pred EEEecCCC----cEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec----------CCCeEEEEECCCCeeeEEE
Q psy10662 48 IVSASTDS----QLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS----------ENNSLYIYYKGLSKHMHAY 113 (221)
Q Consensus 48 l~s~~~d~----~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~ 113 (221)
+++-..++ .|.++|..+++.+..+.....+ .+.++|++++++.+. .++.|.+||+.+.+.+.++
T Consensus 35 yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I 112 (368)
T 1mda_H 35 HITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI 112 (368)
T ss_dssp EEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred EEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEE
Confidence 44544455 7889999999999888655555 799999999887765 3688999999999998776
Q ss_pred EeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC--CCeEEE--EEcCC
Q psy10662 114 RFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE--NNSLYI--YYKGL 161 (221)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~--~d~~~ 161 (221)
....... + ........++++|||++++++.. +..+.+ +|+.+
T Consensus 113 ~v~~~~~-----~-~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 113 ELPDAPR-----F-SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EETTSCS-----C-CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred ECCCccc-----c-ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 2110000 0 00123557899999999998875 467888 88866
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.54 E-value=8.3e-05 Score=53.70 Aligned_cols=182 Identities=9% Similarity=-0.022 Sum_probs=106.8
Q ss_pred EEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcE-EEecCCCcEEEEEcCCC---cccee-eecccccee
Q psy10662 6 LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDI-VSASTDSQLKLWNINKP---NCLRS-FVGHINDKN 79 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l-~s~~~d~~v~~wd~~~~---~~~~~-~~~~~~~v~ 79 (221)
|+.+ ..+.|+..|+. ..+....+. ....+..++|++ ++.| ++-..++.|..+++... ..... +........
T Consensus 4 ll~~-~~~~I~~i~~~-~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 4 LFFT-NRHEVRKMTLD-RSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEE-CBSSEEEEETT-SCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEE-CCCeEEEEECC-CcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 4444 34578999987 444333333 445678999996 4554 45556789999998751 22222 222223457
Q ss_pred EEEEeCCC-CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC-C-CeEEE
Q psy10662 80 FVGLATDG-DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE-N-NSLYI 156 (221)
Q Consensus 80 ~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~~ 156 (221)
.+++.+.+ +++++-...+.|.+.++..... ..+ ..........++++|.+..|+.... . +.|..
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~------------~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~ 147 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTL------------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 147 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEE------------EECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEE------------EECCCCCcceEEeCCCCCEEEEEccCCCCeEEE
Confidence 88998644 4556666778899998764332 111 1112245678999986665554443 2 67877
Q ss_pred EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662 157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI 218 (221)
Q Consensus 157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~ 218 (221)
+++..... ..+. ...-...+.++++|++..|+.+ +..+.|..+++..
T Consensus 148 ~~~dG~~~-~~~~--------------~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 148 GGLNGVDI-YSLV--------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EETTSCCE-EEEE--------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EcCCCCCe-EEEE--------------ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 77643221 1110 0112346789999876666554 4577899998864
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.54 E-value=8.3e-05 Score=53.36 Aligned_cols=195 Identities=8% Similarity=-0.046 Sum_probs=107.2
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecC--CC-cEEEEEcCCCccceeeec-ccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSAST--DS-QLKLWNINKPNCLRSFVG-HIN 76 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~--d~-~v~~wd~~~~~~~~~~~~-~~~ 76 (221)
|+++++++-..++.|..||.. . .....+. .......+++.+++.++.+.. ++ .|..+|..+++....... ...
T Consensus 41 ~~g~lyv~d~~~~~I~~~d~~-g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~ 117 (306)
T 2p4o_A 41 PDGTIFVTNHEVGEIVSITPD-G-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAI 117 (306)
T ss_dssp TTSCEEEEETTTTEEEEECTT-C-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCS
T ss_pred CCCCEEEEeCCCCeEEEECCC-C-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCcc
Confidence 466766666677888888876 2 3333333 345688999998666665542 22 466677777654322211 112
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCee-eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE-ecCCCeE
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKH-MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC-GSENNSL 154 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i 154 (221)
....++..+++..+++-..++.|..+|...++. +... ... .... .....-.....+ +|+++.|++ -...+.|
T Consensus 118 ~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~--~~~-~~~~-~~~~~~~~pngi--s~dg~~lyv~d~~~~~I 191 (306)
T 2p4o_A 118 FLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLE--HPM-LARS-NSESVFPAANGL--KRFGNFLYVSNTEKMLL 191 (306)
T ss_dssp CEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEE--CGG-GSCS-STTCCSCSEEEE--EEETTEEEEEETTTTEE
T ss_pred ccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEE--CCc-cccc-cccCCCCcCCCc--CcCCCEEEEEeCCCCEE
Confidence 234445555555555555688899988875432 1110 000 0000 000111123445 788875544 4557889
Q ss_pred EEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 155 YIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 155 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
..|++.....+.... . .. .......++++++|++.++....+.|.+++..
T Consensus 192 ~~~~~~~~g~~~~~~------~---~~----~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 192 LRIPVDSTDKPGEPE------I---FV----EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEEEBCTTSCBCCCE------E---EE----ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEEEeCCCCCCCccE------E---Ee----ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 999986421110000 0 00 01234678999999887777677889988865
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.53 E-value=0.00011 Score=54.54 Aligned_cols=184 Identities=8% Similarity=-0.110 Sum_probs=101.4
Q ss_pred EEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662 6 LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL 83 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~ 83 (221)
+.+-...+.|..+++. .......+.........+++.+ ++. +++-...+.|.+.++........+.........+++
T Consensus 131 y~~D~~~~~I~r~~~~-g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giav 209 (386)
T 3v65_B 131 FWSDVTLDRILRANLN-GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 209 (386)
T ss_dssp EEEETTTTEEEEEETT-SCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEE
T ss_pred EEEeCCCCcEEEEecC-CCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEE
Confidence 3333345566666665 2222222222223456777775 444 455566778888887644332223223345688999
Q ss_pred eCCCCEEE-EecCC-CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE-ecCCCeEEEEEcC
Q psy10662 84 ATDGDYVA-CGSEN-NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC-GSENNSLYIYYKG 160 (221)
Q Consensus 84 ~~~~~~l~-~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~ 160 (221)
.|.+..++ +-... +.|..+++........ ..........++++|++..|.. -...+.|..+|+.
T Consensus 210 dp~~g~ly~td~~~~~~I~r~~~dG~~~~~~-------------~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 210 HPMEGTIYWTDWGNTPRIEASSMDGSGRRII-------------ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCSCEEE-------------ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred EcCCCeEEEeccCCCCEEEEEeCCCCCcEEE-------------EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 98766544 43344 6788877754322111 1112334678999986665544 4456789888876
Q ss_pred CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
.......+. ........+++ ..+.++++-...+.|..++..+|
T Consensus 277 G~~~~~~~~---------------~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 277 GSHRKAVIS---------------QGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp SCSCEEEEC---------------SSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred CCeeEEEEE---------------CCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCC
Confidence 432211111 01123456777 34566666667888888885444
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.53 E-value=0.0001 Score=53.99 Aligned_cols=178 Identities=8% Similarity=-0.047 Sum_probs=105.0
Q ss_pred CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCC-
Q psy10662 11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG- 87 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~- 87 (221)
..+.|+..++. .... ..+......+..++|++ ++.|+ +-...+.|..+++........+.........+++.+.+
T Consensus 51 ~~~~I~~i~~~-g~~~-~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g 128 (349)
T 3v64_C 51 NRIDIRQVLPH-RSEY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD 128 (349)
T ss_dssp CBSCEEEECTT-SCCE-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred cccceEEEeCC-CCee-EEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCC
Confidence 34457777765 3332 22322345578999995 55544 54567889999987654333332223345788998754
Q ss_pred CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCC-CeEEEEEcCCCCce
Q psy10662 88 DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SEN-NSLYIYYKGLSKHM 165 (221)
Q Consensus 88 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d-~~i~~~d~~~~~~~ 165 (221)
.++++-...+.|.+.++...... .+ ..........++++|.+..|... ... +.|..+++......
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~~~~-~l------------~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~ 195 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGAHRK-VL------------LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR 195 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCSCE-EE------------ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred eEEEEcCCCCeEEEEcCCCCceE-EE------------EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE
Confidence 45566666788999887643321 11 11122456789999865555444 344 67887776533221
Q ss_pred eeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662 166 HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI 218 (221)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~ 218 (221)
... ...-...+.++++|++..|+.+ +..+.|..+++..
T Consensus 196 ~~~---------------~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 196 IIA---------------DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp ESC---------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEE---------------ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 111 0112346789999866655544 4577899888764
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.52 E-value=0.00011 Score=53.84 Aligned_cols=179 Identities=8% Similarity=-0.110 Sum_probs=99.5
Q ss_pred CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCC
Q psy10662 11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGD 88 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 88 (221)
..+.|..+++. .......+.........+++.+ ++. +++-...+.|.+.++........+.........+++.|.+.
T Consensus 93 ~~~~I~r~~~~-g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g 171 (349)
T 3v64_C 93 TLDRILRANLN-GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG 171 (349)
T ss_dssp TTTEEEEEETT-SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTT
T ss_pred cCCceEEEecC-CCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcC
Confidence 44556666655 2222222222223456788875 444 45556678899999865433222222334568999998665
Q ss_pred EE-EEecCC-CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCce
Q psy10662 89 YV-ACGSEN-NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHM 165 (221)
Q Consensus 89 ~l-~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~ 165 (221)
.+ ++-... +.|...++...... .+ ..........++++|++..|..+ ...+.|..+|+......
T Consensus 172 ~ly~td~~~~~~I~r~~~dG~~~~-~~------------~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~ 238 (349)
T 3v64_C 172 TIYWTDWGNTPRIEASSMDGSGRR-II------------ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK 238 (349)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCE-ES------------CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred eEEEeccCCCCEEEEEeCCCCCcE-EE------------EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE
Confidence 44 444444 77888877543211 10 01123456789999866655544 45678999987643221
Q ss_pred eeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 166 HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
..+. ........+++ ..+.++++-...+.|..++..+|
T Consensus 239 ~~~~---------------~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 239 AVIS---------------QGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EEEC---------------SSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEe---------------CCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCC
Confidence 1111 01123456776 34566666666788888875444
No 269
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.49 E-value=0.00015 Score=54.13 Aligned_cols=179 Identities=8% Similarity=-0.047 Sum_probs=107.2
Q ss_pred CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCc----cceeeeccccceeEEEEe
Q psy10662 11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPN----CLRSFVGHINDKNFVGLA 84 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~----~~~~~~~~~~~v~~~~~~ 84 (221)
..+.|+..++. ...... +......+..|+|++ ++.|+ +-...+.|+.+++.... ....+.........+++.
T Consensus 90 ~~~~I~~i~l~-~~~~~~-~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD 167 (400)
T 3p5b_L 90 NRHEVRKMTLD-RSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 167 (400)
T ss_dssp ETTEEEEECTT-SCSCEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEE
T ss_pred ccceeEEEccC-CcceeE-eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEE
Confidence 45688888887 333222 333456788999996 45544 44567889999886521 222222233456788998
Q ss_pred C-CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec--CCCeEEEEEcCC
Q psy10662 85 T-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGL 161 (221)
Q Consensus 85 ~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~ 161 (221)
+ .++++++-...+.|.+.++........ +.........++++|.+..|+... ..+.|...++..
T Consensus 168 ~~~~~lY~~d~~~~~I~~~~~~g~~~~~l-------------~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 168 WIHSNIYWTDSVLGTVSVADTKGVKRKTL-------------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp TTTTEEEEEETTTTEEEEECTTTCSEEEE-------------EECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred ecCCceEEEECCCCeEEEEeCCCCceEEE-------------EeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 7 455566666778899888765433211 122234577899999666555444 236787777654
Q ss_pred CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCcc
Q psy10662 162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPIR 219 (221)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~ 219 (221)
........ ..-...+.+++++++..|+.+ +..+.|..+++...
T Consensus 235 ~~~~~~~~---------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 235 VDIYSLVT---------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp CSCEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CccEEEEE---------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 33221110 112346889999877666655 45778888887643
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.48 E-value=1.8e-05 Score=63.94 Aligned_cols=103 Identities=12% Similarity=0.101 Sum_probs=63.0
Q ss_pred CCCceEEEEeC-C----CeEEEEEecCCc-eeeE-EEEeccCceEEEEEecCC-cEEEecCC-----CcEEEEEcCCCcc
Q psy10662 1 MNSCHLAFGSA-D----HCVHYYDLRNTK-EALA-VFKGHRKAVSYVKFLNKE-DIVSASTD-----SQLKLWNINKPNC 67 (221)
Q Consensus 1 ~~~~~l~~~~~-d----g~i~i~~~~~~~-~~~~-~~~~~~~~i~~~~~~~~~-~l~s~~~d-----~~v~~wd~~~~~~ 67 (221)
|||++||.+.. + ..|+++|+. ++ +.+. .+.. ....++|+|++ .|+....+ ..|..+++.+++.
T Consensus 184 PDG~~lAy~~~~~G~~~~~l~v~dl~-~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~ 259 (751)
T 2xe4_A 184 PEHDLVAFSVDMSGNEVYTIEFKRIS-DPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS 259 (751)
T ss_dssp TTTCEEEEEEESSSSSCEEEEEEETT-CTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG
T ss_pred CCCCEEEEEEeCCCCceEEEEEEECC-CCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch
Confidence 68988886543 2 259999998 44 4221 1221 13567899865 46555444 3588888877643
Q ss_pred c--eeee-ccccceeEEEEeCCCCEEEEec---CCCeEEEEECCCC
Q psy10662 68 L--RSFV-GHINDKNFVGLATDGDYVACGS---ENNSLYIYYKGLS 107 (221)
Q Consensus 68 ~--~~~~-~~~~~v~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~ 107 (221)
. ..+. ........+.|+|+|++|+..+ ....|.++|+.++
T Consensus 260 ~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 260 EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 2 2222 2223456789999999876554 2346778888764
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=5.8e-05 Score=56.96 Aligned_cols=154 Identities=9% Similarity=0.080 Sum_probs=93.8
Q ss_pred ceEEEEEec--CCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecC-CC----eEEEEECCCCe
Q psy10662 36 AVSYVKFLN--KEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSE-NN----SLYIYYKGLSK 108 (221)
Q Consensus 36 ~i~~~~~~~--~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~v~iwd~~~~~ 108 (221)
....|+++| ++.|+.+...+.|+.+|+..+...... ........++|++++++|+.+.. ++ .+...+. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 357888885 466666655588999998765543333 34455789999999995554443 22 2333332 121
Q ss_pred eeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662 109 HMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN 187 (221)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (221)
... ...+. .......++++| ++.++++-..++.|..++........... . +..
T Consensus 216 ~~~-----------~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~-------------~-~~~ 269 (430)
T 3tc9_A 216 FKV-----------ITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT-------------I-QDS 269 (430)
T ss_dssp SCS-----------EEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE-------------C-SSS
T ss_pred eee-----------eeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE-------------c-CCC
Confidence 110 01111 234466788999 77777776678899999987554321111 0 111
Q ss_pred cceeEEEEcCCCcEEE-EecCCCeEEEEECC
Q psy10662 188 EFVSAVCWRQLSRVLV-AANSQGIIKIYVIP 217 (221)
Q Consensus 188 ~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~ 217 (221)
.....++|+|+|++|+ +-...+.|..++..
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 3457899999999554 44568889988765
No 272
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.39 E-value=0.00023 Score=58.00 Aligned_cols=190 Identities=11% Similarity=0.099 Sum_probs=115.5
Q ss_pred EEEEeCCCeEEEEEecCCceeeEEEEe-------ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeec-----
Q psy10662 6 LAFGSADHCVHYYDLRNTKEALAVFKG-------HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVG----- 73 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~----- 73 (221)
|-.|+.++-|..|+.. ... ...+.. ....|.++...+++.|..|+.++-|..||..+++.......
T Consensus 323 lWigt~~~Gl~~~~~~-~~~-~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~ 400 (795)
T 4a2l_A 323 MWLGTYFGGLNYYHPI-RNR-FKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESA 400 (795)
T ss_dssp EEEEESSSCEEEECGG-GGS-SEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC-----
T ss_pred EEEEECCCCeEEeCCC-ccc-ceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcc
Confidence 4456666677778765 222 222221 23468999888888899999888899999876654322111
Q ss_pred ---cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662 74 ---HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE 150 (221)
Q Consensus 74 ---~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 150 (221)
....|.++...+++..+..|+.++-|..+|..+++... + ..... ......|.++...++|++.+.. .
T Consensus 401 ~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~--~~~~~------~l~~~~v~~i~~d~~g~lwigt-~ 470 (795)
T 4a2l_A 401 RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-F--NQRNS------QLVNENVYAILPDGEGNLWLGT-L 470 (795)
T ss_dssp -CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-E--CTTTS------CCSCSCEEEEEECSSSCEEEEE-S
T ss_pred cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-e--ecCCC------CcCCCeeEEEEECCCCCEEEEe-c
Confidence 13568899888888846666666669999988765422 1 10000 0123568888888888755544 4
Q ss_pred CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
+ -+..||..+++... +. .. . ....-....|.++...++|++.+... +| +..|+..++
T Consensus 471 ~-Gl~~~~~~~~~~~~-~~--~~-~-----~~~~~~~~~i~~i~~d~~g~lWigt~-~G-l~~~~~~~~ 527 (795)
T 4a2l_A 471 S-ALVRFNPEQRSFTT-IE--KE-K-----DGTPVVSKQITTLFRDSHKRLWIGGE-EG-LSVFKQEGL 527 (795)
T ss_dssp S-CEEEEETTTTEEEE-CC--BC-T-----TCCBCCCCCEEEEEECTTCCEEEEES-SC-EEEEEEETT
T ss_pred C-ceeEEeCCCCeEEE-cc--cc-c-----cccccCCceEEEEEECCCCCEEEEeC-Cc-eEEEeCCCC
Confidence 4 48888876653321 10 00 0 00011235688999999988766554 44 777776543
No 273
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.36 E-value=7.6e-05 Score=53.66 Aligned_cols=174 Identities=10% Similarity=0.095 Sum_probs=106.9
Q ss_pred ccCceEEEEEec-CCcEEEec-CCCcEEEEEcCCCcccee-eec----c--ccceeEEEE---eCCCCEEEEec------
Q psy10662 33 HRKAVSYVKFLN-KEDIVSAS-TDSQLKLWNINKPNCLRS-FVG----H--INDKNFVGL---ATDGDYVACGS------ 94 (221)
Q Consensus 33 ~~~~i~~~~~~~-~~~l~s~~-~d~~v~~wd~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~------ 94 (221)
......+++|++ ++.+..++ ..++|..||...+..... +.. . ...+..+.| .|++.++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 334456788985 55555554 799999999875533222 221 1 113578999 68877776533
Q ss_pred -------CCCeEEEEECC---CCeeeEEEEeecccceeEeeEEE-eeCceEEEEEecCCCEEEEecCC-CeEEEEEcCCC
Q psy10662 95 -------ENNSLYIYYKG---LSKHMHAYRFDTVRSMLESSFVG-HINDKNFVGLATDGDYVACGSEN-NSLYIYYKGLS 162 (221)
Q Consensus 95 -------~d~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~d~~~~ 162 (221)
.+..|..||+. +++.+............. ...+ .......++..++|+..++++.. +.|...+....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~-~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFE-KKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHH-HHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccc-ccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 26779999998 777766543211000000 0000 11236789999999999988888 88777665433
Q ss_pred CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 163 KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
....+.... .........+.++++|+|+.|++...+|.|..+|+.
T Consensus 170 -~~~~~~~~~---------~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 170 -TVSTFAWES---------GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp -CEEEEEECC---------CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred -EEeeeeecC---------CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 222221111 001122346789999999988888779999999975
No 274
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.34 E-value=0.00028 Score=50.55 Aligned_cols=198 Identities=11% Similarity=0.183 Sum_probs=116.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-Cccceeeeccc----
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-PNCLRSFVGHI---- 75 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-~~~~~~~~~~~---- 75 (221)
|..+.||.-. ...+.|+|++ +++.++.+.- ..+|.-=.|-....|+..+ +..|+-|++.. ..+.+.+..|.
T Consensus 76 P~~~ViALra-g~~LQiFnle-tK~klks~~~-~e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~ 151 (365)
T 2xzh_A 76 PASKVIALKA-GKTLQIFNIE-MKSKMKAHTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAG 151 (365)
T ss_dssp SSSSEEEEEE-TTEEEEEETT-TTEEEEEEEC-SSCEEEEEECSSSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTT
T ss_pred CCccEEEEec-CCeEEEechH-Hhhhhcceec-CCccEEEEecCCCeEEEEc-CCcEEEEcccCCCCCceeeecchhccc
Confidence 4556667665 6789999998 7777777763 4577777777666655443 46799999974 35555665553
Q ss_pred cceeEEEEeCCCCEEEEec---C----CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe--cCC-CEE
Q psy10662 76 NDKNFVGLATDGDYVACGS---E----NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA--TDG-DYV 145 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~---~----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~l 145 (221)
..|..-..+++.+.++..+ . .|.+.+|..+.+.. +.+++|...-..+.+. +.. +++
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s--------------Q~ieGhaa~F~~~~~~g~~~~~~lf 217 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--------------QPIEGHAASFAQFKMEGNAEESTLF 217 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE--------------EEECCSEEEEEEECCTTCSSCEEEE
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc--------------ceeeeeeeeeEEEecCCCCCCceEE
Confidence 3566666788888654332 1 35667776654432 2234554433322221 111 122
Q ss_pred EEecC---CCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 146 ACGSE---NNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 146 ~~~~~---d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+-+.. .+.+++-++... .....+. .+........+.......++..++....++.-+.-|.|++||++++.
T Consensus 218 ~fa~r~~~g~kLhIiEi~~~~~~~~~f~----kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 218 CFAVRGQAGGKLHIIEVGTPPTGNQPFP----KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp EEEEEETTEEEEEEEECSSCCTTCCCCC----CEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred EEEEecCCCcEEEEEEcCCCCCCCCCcc----cccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCc
Confidence 22221 257888887543 1111111 00001111112233445678899988899999999999999999986
No 275
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.34 E-value=0.00023 Score=49.51 Aligned_cols=199 Identities=7% Similarity=0.041 Sum_probs=113.7
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEEEe-ccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCccc---eeee------
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNCL---RSFV------ 72 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~~---~~~~------ 72 (221)
.++++...++.|...|.. ++.++.+.- -....-.|++.+++.++ +.-.++.+.++++.....+ ....
T Consensus 40 ~L~aV~d~~~~I~~ld~~--g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~ 117 (255)
T 3qqz_A 40 TLFSTINKPAAIVEMTTN--GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQES 117 (255)
T ss_dssp EEEEEEETTEEEEEEETT--CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSC
T ss_pred EEEEEECCCCeEEEEeCC--CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccc
Confidence 455567778888888875 666666642 22467888888766654 4445778889887654321 1111
Q ss_pred ccccceeEEEEeCCCCEEEEecCCCeEEEEECC---CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC-CCEEEEe
Q psy10662 73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKG---LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD-GDYVACG 148 (221)
Q Consensus 73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~ 148 (221)
..+.....++|+|.++.|+++.+.....+|.+. ..+.+.... +... .. ......+..++++|. +++++..
T Consensus 118 ~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~-~~~~---~~--~~~~~d~S~l~~dp~tg~lliLS 191 (255)
T 3qqz_A 118 PTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISK-DKAL---QR--QFTLDDVSGAEFNQQKNTLLVLS 191 (255)
T ss_dssp CCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEE-CHHH---HH--TCCSSCCCEEEEETTTTEEEEEE
T ss_pred cccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeec-chhh---cc--ccccCCceeEEEcCCCCeEEEEE
Confidence 123346899999998877666665545555443 111111110 0000 00 011234678999984 4566677
Q ss_pred cCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 149 SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 149 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
...+.+..+|.. ++.+..+....... .+...-...-.++|.++|++.++ ++.+.++.+.-..
T Consensus 192 ~~s~~L~~~d~~-g~~~~~~~L~~g~~------~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~~ 253 (255)
T 3qqz_A 192 HESRALQEVTLV-GEVIGEMSLTKGSR------GLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQS 253 (255)
T ss_dssp TTTTEEEEECTT-CCEEEEEECSTTGG------GCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC--
T ss_pred CCCCeEEEEcCC-CCEEEEEEcCCccC------CcccccCCCCeeEECCCCCEEEE-cCCceEEEEEecC
Confidence 778889999865 44555554332110 01011123568999999985555 6777777665443
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.32 E-value=0.00033 Score=50.59 Aligned_cols=180 Identities=13% Similarity=0.045 Sum_probs=106.4
Q ss_pred CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccce-eeeccccceeEEEEeCC-
Q psy10662 11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLR-SFVGHINDKNFVGLATD- 86 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~-~~~~~~~~v~~~~~~~~- 86 (221)
....|+..++.........+-.......++.|.+ ++. +++-...+.|..+++....... .+...-.....+++.+.
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 3568999999843211122221233567899986 455 4455667889999987654222 22222234678889874
Q ss_pred CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec--CCCeEEEEEcCCCCc
Q psy10662 87 GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGLSKH 164 (221)
Q Consensus 87 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~ 164 (221)
+.++++-...+.|.++++..... ..+ ..........++++|.+..|+... ..+.|...++.-...
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~-~~l------------~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLR-KVL------------FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC-EEE------------ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CeEEEEECCCCEEEEEECCCCcE-EEE------------EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 45556666778899998764322 111 112234567899998765555544 357787777653221
Q ss_pred eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662 165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI 218 (221)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~ 218 (221)
..... ..-...+.++++|++..|+.+ +..+.|..+++..
T Consensus 158 ~~~~~---------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 158 FIIIN---------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp EEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEE---------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 11110 112245789999866655554 4578899998864
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.32 E-value=2.8e-05 Score=62.90 Aligned_cols=114 Identities=13% Similarity=0.097 Sum_probs=69.7
Q ss_pred ceEEEEEe-cCCc-EE-EecCC----CcEEEEEcCCC-ccceeeeccccceeEEEEeCCCCEEEEecCC-----CeEEEE
Q psy10662 36 AVSYVKFL-NKED-IV-SASTD----SQLKLWNINKP-NCLRSFVGHINDKNFVGLATDGDYVACGSEN-----NSLYIY 102 (221)
Q Consensus 36 ~i~~~~~~-~~~~-l~-s~~~d----~~v~~wd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iw 102 (221)
.+...+|+ |++. |+ +...+ ..|+++|+.++ +.+... -......+.|+||++.|+....+ ..|..+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 57889999 8765 44 22222 35999999988 633211 11224578999999877766554 257777
Q ss_pred ECCCCeeeEEEEeecccceeEeeEE-EeeCceEEEEEecCCCEEEEecC---CCeEEEEEcCCC
Q psy10662 103 YKGLSKHMHAYRFDTVRSMLESSFV-GHINDKNFVGLATDGDYVACGSE---NNSLYIYYKGLS 162 (221)
Q Consensus 103 d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~ 162 (221)
++.+++..... .+. ........+.|+|||++|+.... ...|+++|+.++
T Consensus 253 ~lgt~~~~~~l-----------v~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 253 VMGKLQSEDVC-----------LYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp ETTSCGGGCEE-----------EEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred ECCCCchhcEE-----------EEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 77665321111 011 11223457889999998876553 346777887654
No 278
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.29 E-value=0.00079 Score=54.86 Aligned_cols=190 Identities=9% Similarity=-0.004 Sum_probs=113.8
Q ss_pred eEEEEeCCCeEEEEEecCCceeeEEEE---------eccCceEEEEEecCCc-EEEecCCCcEEEEEcCCCccceeee--
Q psy10662 5 HLAFGSADHCVHYYDLRNTKEALAVFK---------GHRKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNCLRSFV-- 72 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~~~~~~-- 72 (221)
.|-.|..++-|..|+.. +++. ..+. .....|.++...+++. |..|+.++-+..||..+++......
T Consensus 369 ~lWiGt~~~Gl~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~ 446 (795)
T 4a2l_A 369 NLWIGTNDGGLNLYNPI-TQRF-TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRN 446 (795)
T ss_dssp CEEEEESSSCEEEECTT-TCCE-EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTT
T ss_pred CEEEEECCCCeEEEcCC-CCcE-EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCC
Confidence 34456667678888875 3322 2221 1235688998887777 8888888889999987765432211
Q ss_pred --ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662 73 --GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE 150 (221)
Q Consensus 73 --~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 150 (221)
.....|.++...+++.+.+... +| +..||..+++..... .... ...-....|.++...++|++.+.. .
T Consensus 447 ~~l~~~~v~~i~~d~~g~lwigt~-~G-l~~~~~~~~~~~~~~---~~~~----~~~~~~~~i~~i~~d~~g~lWigt-~ 516 (795)
T 4a2l_A 447 SQLVNENVYAILPDGEGNLWLGTL-SA-LVRFNPEQRSFTTIE---KEKD----GTPVVSKQITTLFRDSHKRLWIGG-E 516 (795)
T ss_dssp SCCSCSCEEEEEECSSSCEEEEES-SC-EEEEETTTTEEEECC---BCTT----CCBCCCCCEEEEEECTTCCEEEEE-S
T ss_pred CCcCCCeeEEEEECCCCCEEEEec-Cc-eeEEeCCCCeEEEcc---cccc----ccccCCceEEEEEECCCCCEEEEe-C
Confidence 1235688998888887655443 54 888998776542210 0000 000123568888888888765544 4
Q ss_pred CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
+-+..||..+... .+..... ........|.++..+++|++.++.. .| |..|+..++
T Consensus 517 -~Gl~~~~~~~~~~--~~~~~~~--------~~~l~~~~i~~i~~d~~g~lWigT~-~G-l~~~d~~~~ 572 (795)
T 4a2l_A 517 -EGLSVFKQEGLDI--QKASILP--------VSNVTKLFTNCIYEASNGIIWVGTR-EG-FYCFNEKDK 572 (795)
T ss_dssp -SCEEEEEEETTEE--EECCCSC--------SCGGGGSCEEEEEECTTSCEEEEES-SC-EEEEETTTT
T ss_pred -CceEEEeCCCCeE--EEecCCC--------CCCCCCCeeEEEEECCCCCEEEEeC-CC-ceeECCCCC
Confidence 4588888766543 1210000 0011345688999999998666544 34 677877654
No 279
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=0.00026 Score=57.57 Aligned_cols=191 Identities=9% Similarity=0.053 Sum_probs=111.7
Q ss_pred eEEEEeCCCeEEEEEecCCceeeEEE---EeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeee--cccccee
Q psy10662 5 HLAFGSADHCVHYYDLRNTKEALAVF---KGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFV--GHINDKN 79 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~--~~~~~v~ 79 (221)
.|-.|..++-|..|+.. ++...... ......|.++...+++.|..|+.++-+..+|..+++...... .....|.
T Consensus 375 ~lWigt~~~Gl~~~~~~-~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~ 453 (781)
T 3v9f_A 375 KLWIGTDGGGINVFENG-KRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVR 453 (781)
T ss_dssp CEEEEEBSSCEEEEETT-EEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEE
T ss_pred CEEEEeCCCcEEEEECC-CCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEE
Confidence 34455555667778765 22221111 123457889888777888888887789999987665432211 1245688
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
++...+++.+.+. +.. -|..+|..+++...... .... ......|.++...++|++.+ |+.++-+..||.
T Consensus 454 ~i~~d~~g~lwig-t~~-Gl~~~~~~~~~~~~~~~--~~~~------~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~ 522 (781)
T 3v9f_A 454 VFYEDKNKKIWIG-THA-GVFVIDLASKKVIHHYD--TSNS------QLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTP 522 (781)
T ss_dssp EEEECTTSEEEEE-ETT-EEEEEESSSSSCCEEEC--TTTS------SCSCSCEEEEEECTTCCEEE-EESSSCEEEECT
T ss_pred EEEECCCCCEEEE-ECC-ceEEEeCCCCeEEeccc--Cccc------ccccceeEEEEEcCCCCEEE-EEcCCCEEEEeC
Confidence 8888887765444 444 58889987655432110 0000 01135688888888887555 444334777876
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.+.+.. .+. . ... -....|.++...++|++.++.. +|.+..|+..+++
T Consensus 523 ~~~~~~-~~~--~-------~~~--l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 523 DMQLVR-KFN--Q-------YEG--FCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFD 570 (781)
T ss_dssp TCCEEE-EEC--T-------TTT--CSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCC
T ss_pred CCCeEE-Ecc--C-------CCC--CCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCc
Confidence 554321 111 0 001 1234688999988888666554 6765777776543
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.27 E-value=0.00046 Score=49.81 Aligned_cols=189 Identities=7% Similarity=-0.123 Sum_probs=104.8
Q ss_pred eEEEEeCCCeEEEEEecCC---ceeeEEEEeccCceEEEEEec-CCcE-EEecCCCcEEEEEcCCCccceeeecccccee
Q psy10662 5 HLAFGSADHCVHYYDLRNT---KEALAVFKGHRKAVSYVKFLN-KEDI-VSASTDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~---~~~~~~~~~~~~~i~~~~~~~-~~~l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
++.+-...+.|..+++... ......+...-.....+++.+ ++.| ++-...+.|.+.++........+........
T Consensus 44 ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~ 123 (316)
T 1ijq_A 44 IYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR 123 (316)
T ss_dssp EEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEE
T ss_pred EEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcc
Confidence 4444444577888877621 111122222223567888874 5554 4556788999999865433222222334568
Q ss_pred EEEEeCCCCEEEEec-CC-CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEE
Q psy10662 80 FVGLATDGDYVACGS-EN-NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYI 156 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~-~d-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~ 156 (221)
.+++.|.+..++.+. .. +.|...++..... ..+ ....-.....++++|++..|..+ ...+.|..
T Consensus 124 ~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~------------~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~ 190 (316)
T 1ijq_A 124 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSL------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISS 190 (316)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEE------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEE------------EECCCCCceEEEEeccCCEEEEEECCCCeEEE
Confidence 999998666544333 33 6788777653221 111 01123457789999876665544 45678999
Q ss_pred EEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 157 YYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 157 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+|+..... ..+. .. .........+++. .+.++++-...+.|..++..+++
T Consensus 191 ~d~dg~~~-~~~~-~~-----------~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 191 IDVNGGNR-KTIL-ED-----------EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EETTSCSC-EEEE-EC-----------TTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred EecCCCce-EEEe-ec-----------CCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc
Confidence 99864322 2221 00 0011224567774 45666666678889888875543
No 281
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.24 E-value=0.00012 Score=54.42 Aligned_cols=157 Identities=13% Similarity=0.131 Sum_probs=96.2
Q ss_pred CCcEEEecCCCcEEEEEcCCCccceeeecc----ccceeEEEEeCCCCEEEEecCCCeEEEEECCCCee----------e
Q psy10662 45 KEDIVSASTDSQLKLWNINKPNCLRSFVGH----INDKNFVGLATDGDYVACGSENNSLYIYYKGLSKH----------M 110 (221)
Q Consensus 45 ~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~----------~ 110 (221)
+..++.+ .++.||.-++......+.+... -..+..+..+|+|+++|..+.. .|.|-.+..+.. +
T Consensus 32 ~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 32 GTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccccccc
Confidence 4444443 3578888888755455555432 2257889999999999888655 688888763221 1
Q ss_pred EEEEeecccceeEeeEEEeeCceEEEEEecC---CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662 111 HAYRFDTVRSMLESSFVGHINDKNFVGLATD---GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN 187 (221)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (221)
+...+..... ......+|..+.|+|- +..|++-..|+.|++||+........ .++.... ........
T Consensus 110 q~~ty~l~~~-----~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~----~fg~d~~~ 179 (452)
T 3pbp_A 110 QIFHYSIDEE-----EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNN----SFGLDARV 179 (452)
T ss_dssp EEEEEEGGGC-----C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCS----EEESCSSC
T ss_pred ceeEEEcCCc-----ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccc----ccCCCccc
Confidence 1111111000 0113567999999994 55899999999999999986332222 2221111 11222334
Q ss_pred cceeEEEEcCCCcEEEEec--CCCeEEE
Q psy10662 188 EFVSAVCWRQLSRVLVAAN--SQGIIKI 213 (221)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~~--~dg~i~i 213 (221)
..|.+++|.+++-.|+..+ .+|.|+-
T Consensus 180 ~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 180 NDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred ceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 6788999999988787755 7787753
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.24 E-value=0.00053 Score=49.52 Aligned_cols=182 Identities=9% Similarity=-0.042 Sum_probs=100.3
Q ss_pred eCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCC
Q psy10662 10 SADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG 87 (221)
Q Consensus 10 ~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~ 87 (221)
...+.|..+++.........+...-.....+++.+ ++. +++-...+.|.++++........+.........+++.|.+
T Consensus 54 ~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~ 133 (318)
T 3sov_A 54 VSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSS 133 (318)
T ss_dssp TTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGG
T ss_pred CCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCC
Confidence 33455666665522111122222223456788874 444 4555667889999986543222222333456899999876
Q ss_pred CEEEEec--CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCc
Q psy10662 88 DYVACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKH 164 (221)
Q Consensus 88 ~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~ 164 (221)
..++.+. ..+.|...++..... ..+ ....-.....++++|++..|..+ ...+.|..+|+.....
T Consensus 134 g~ly~td~~~~~~I~r~~~dG~~~-~~~------------~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 200 (318)
T 3sov_A 134 GFMYWTDWGEVPKIERAGMDGSSR-FII------------INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR 200 (318)
T ss_dssp TEEEEEECSSSCEEEEEETTSCSC-EEE------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CEEEEEecCCCCEEEEEEcCCCCe-EEE------------EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce
Confidence 6554443 357788777653221 111 01122456789999966655544 4567899998764322
Q ss_pred eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
..+. . ........+++.. +.++.+-...+.|..++..+|+
T Consensus 201 -~~~~-~-------------~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 201 -QAVV-K-------------GSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp -EEEE-C-------------SCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred -EEEe-c-------------CCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence 1111 0 1112345666653 4555666667888888886554
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.23 E-value=0.00028 Score=53.31 Aligned_cols=155 Identities=11% Similarity=0.085 Sum_probs=92.6
Q ss_pred ceEEEEEecC---CcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEecCC---Ce-EEEEECCCCe
Q psy10662 36 AVSYVKFLNK---EDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGSEN---NS-LYIYYKGLSK 108 (221)
Q Consensus 36 ~i~~~~~~~~---~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~-v~iwd~~~~~ 108 (221)
....|+|.|+ +.|+.+...+.|+.+|..+++..... ........++++++++++++.... .. +...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3568888873 66766655588999998776654333 334457899999999955554321 11 2222211110
Q ss_pred eeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662 109 HMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN 187 (221)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (221)
. .... .........++++| ++.+.++-..++.|+.+|..++.....+. .. +..
T Consensus 219 ~------------~~~~-~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~-~~------------~~~ 272 (433)
T 4hw6_A 219 T------------ERLS-LCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV-MM------------DTK 272 (433)
T ss_dssp C------------CEEE-EEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE-EC------------SCC
T ss_pred e------------cccc-ccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe-cc------------CCC
Confidence 0 0011 11234566788999 77766666677889999887665422211 00 011
Q ss_pred cceeEEEEcCCCcEEE-EecCCCeEEEEECC
Q psy10662 188 EFVSAVCWRQLSRVLV-AANSQGIIKIYVIP 217 (221)
Q Consensus 188 ~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~ 217 (221)
..-..++|+|+|++|+ +-...+.|+.+++.
T Consensus 273 ~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 273 GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 1224699999998554 44567899998865
No 284
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.17 E-value=0.00073 Score=48.42 Aligned_cols=178 Identities=11% Similarity=0.014 Sum_probs=94.4
Q ss_pred CCCceEEEEeCCC--eEEEEEecCCceeeEEEEe-ccCceEEEEEecCCcEE-EecCCCcEEEEEcCCCcc-ceee----
Q psy10662 1 MNSCHLAFGSADH--CVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKEDIV-SASTDSQLKLWNINKPNC-LRSF---- 71 (221)
Q Consensus 1 ~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~-s~~~d~~v~~wd~~~~~~-~~~~---- 71 (221)
++++++++....+ .|..++.. +++....... .......++..+++.++ +-..++.|.++|..+++. +...
T Consensus 81 ~dG~l~vad~~~~~~~v~~~d~~-~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~ 159 (306)
T 2p4o_A 81 SNGDLVATGWNADSIPVVSLVKS-DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML 159 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEECT-TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG
T ss_pred CCCcEEEEeccCCcceEEEEcCC-CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcc
Confidence 4566555443322 35555654 4443222221 11223445544555544 444588899998765421 1100
Q ss_pred -----eccccceeEEEEeCCCCEE-EEecCCCeEEEEECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE
Q psy10662 72 -----VGHINDKNFVGLATDGDYV-ACGSENNSLYIYYKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY 144 (221)
Q Consensus 72 -----~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 144 (221)
...-...+.+ +|+++.+ ++-...+.|..+|+.. ++. . ... .+ ........++++++|++
T Consensus 160 ~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~-~-------~~~---~~-~~~~~P~gi~vd~dG~l 225 (306)
T 2p4o_A 160 ARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKP-G-------EPE---IF-VEQTNIDDFAFDVEGNL 225 (306)
T ss_dssp SCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCB-C-------CCE---EE-EESCCCSSEEEBTTCCE
T ss_pred ccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCC-C-------ccE---EE-eccCCCCCeEECCCCCE
Confidence 0111123445 7787754 5556678899999864 221 0 000 01 11134567899999998
Q ss_pred EEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEc---CCCcEEEEecC
Q psy10662 145 VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWR---QLSRVLVAANS 207 (221)
Q Consensus 145 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~ 207 (221)
+++....+.|.++|.. ++...... .........+++|. |+++.|+.++.
T Consensus 226 ~va~~~~~~V~~~~~~-G~~~~~~~-------------~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 226 YGATHIYNSVVRIAPD-RSTTIIAQ-------------AEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEECBTTCCEEEECTT-CCEEEEEC-------------GGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEeCCCCeEEEECCC-CCEEEEee-------------cccccCCceEEEEecccCCCCEEEEECC
Confidence 7777778889999864 33211100 00112357889998 88777766543
No 285
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.16 E-value=0.00064 Score=47.34 Aligned_cols=175 Identities=13% Similarity=0.131 Sum_probs=104.0
Q ss_pred EeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccceeeec-cccceeEEEEeCCCCEEEEecCCCeEEEEECCCC
Q psy10662 31 KGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLRSFVG-HINDKNFVGLATDGDYVACGSENNSLYIYYKGLS 107 (221)
Q Consensus 31 ~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~ 107 (221)
.+-...+..++|+| ++.|+ +...++.|...|.. ++.++.+.- -......+++.+++.++++.-.++.+.++++...
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 34446799999997 45555 46678899999987 777766631 1245678888888887777667788999987655
Q ss_pred eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC---CCceeeeeeeccccccccccccc
Q psy10662 108 KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL---SKHMHAYRFDTVRSMLERDRNED 184 (221)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~ 184 (221)
..+......... . .....+...-.++|+|.++.|.++.+.....+|..+. ...+.... +. ... ..
T Consensus 102 ~~i~~~~~~~~~---~-~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~-~~---~~~--~~-- 169 (255)
T 3qqz_A 102 SEVKILKKIKIP---L-QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISK-DK---ALQ--RQ-- 169 (255)
T ss_dssp CCEEEEEEEECC---C-SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEE-CH---HHH--HT--
T ss_pred Ceeeeeeeeccc---c-ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeec-ch---hhc--cc--
Confidence 432211100000 0 0012344567899999998777777766656665541 11111110 00 000 00
Q ss_pred ccccceeEEEEcCC-CcEEEEecCCCeEEEEECCc
Q psy10662 185 DTNEFVSAVCWRQL-SRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 185 ~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~ 218 (221)
.+...+.+++++|. +.+++.......+..+|...
T Consensus 170 ~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 170 FTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp CCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred cccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC
Confidence 11224678999995 45555566677777777654
No 286
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.11 E-value=0.0013 Score=49.11 Aligned_cols=198 Identities=11% Similarity=0.182 Sum_probs=117.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-Cccceeeeccc----
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-PNCLRSFVGHI---- 75 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-~~~~~~~~~~~---- 75 (221)
|..+.||.-. ...+.|||++ ++..++.+.- ...|.-=.|-+...|+..+ +..|+-|++.. ..+.+.+..|.
T Consensus 75 P~~~iiALra-g~~lQiFnle-~K~klks~~~-~e~VvfWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~ 150 (494)
T 1bpo_A 75 PASKVIALKA-GKTLQIFNIE-MKSKMKAHTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAG 150 (494)
T ss_dssp SSSSCEEEEE-TTEEEEEETT-TTEEEEEEEC-SSCCCEEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTT
T ss_pred CCCcEEEEec-CCeEEEEchH-Hhhhhcceec-CCCceEEEecCCCeEEEEc-CCeeEEecccCCCCchhheecchhccc
Confidence 4556666654 6799999998 7777777763 4567676777666655543 56799999964 35556665553
Q ss_pred cceeEEEEeCCCCEEEEec---C----CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC---CEE
Q psy10662 76 NDKNFVGLATDGDYVACGS---E----NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG---DYV 145 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~---~----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l 145 (221)
..|..-..+++.+.++..+ . .|.+.+|..+.+.. +.+.+|...-..+.+..+. +++
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s--------------Q~ieGhaa~F~~~~~~g~~~~~~lf 216 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--------------QPIEGHAASFAQFKMEGNAEESTLF 216 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE--------------EEECCSEEEEEEEECTTCSSEEEEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc--------------chheeeeeeeEEEecCCCCCCceEE
Confidence 3566667788888765332 2 35667776654432 2245554443333332111 122
Q ss_pred EEecC---CCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 146 ACGSE---NNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 146 ~~~~~---d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+-+.. .+.+.+-++... .....+. .+........+.......++..++....++.-+.-|.|++||+.++.
T Consensus 217 ~fa~r~~~g~kLhi~Ei~~~~~~~~~f~----kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt 291 (494)
T 1bpo_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFP----KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (494)
T ss_dssp EEEECSTTCCEEEEEECSCCCTTCCCCC----CEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred EEEEecCCCcEEEEEEcCCCccCCCCcc----ceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence 22222 368888887543 1111111 00111111112233445678999988899999999999999999985
No 287
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.10 E-value=0.0014 Score=53.26 Aligned_cols=187 Identities=13% Similarity=0.129 Sum_probs=109.8
Q ss_pred EEEEeCCCeEEEEEecCCceeeEEEEe----------ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee---e
Q psy10662 6 LAFGSADHCVHYYDLRNTKEALAVFKG----------HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF---V 72 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~---~ 72 (221)
|-.|..++-|..++.. ... ...+.. ....|.++...+++.|..|+.++-|..||..+++..... .
T Consensus 326 lWigt~~~Gl~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~ 403 (781)
T 3v9f_A 326 IWIGTWGGGINFISNA-PPT-FHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRE 403 (781)
T ss_dssp EEEEEBSSCEEEECSS-CCS-CEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----
T ss_pred EEEEecCCeEEEeCCC-CCc-ceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCC
Confidence 4455556667777765 222 222210 234688888887788888887777999998654332211 1
Q ss_pred ccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662 73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN 152 (221)
Q Consensus 73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 152 (221)
.....|.++...+++.+.+ |+.++-+..+|..+++... + ... ......|.++...+++++.+ |+. +
T Consensus 404 ~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~-~--~~~--------~~~~~~v~~i~~d~~g~lwi-gt~-~ 469 (781)
T 3v9f_A 404 LLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQI-I--ELE--------KNELLDVRVFYEDKNKKIWI-GTH-A 469 (781)
T ss_dssp CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEE-C--CST--------TTCCCCEEEEEECTTSEEEE-EET-T
T ss_pred CCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEE-e--ccC--------CCCCCeEEEEEECCCCCEEE-EEC-C
Confidence 1235688888887776544 5555668888877654321 1 000 01235688888888876544 444 5
Q ss_pred eEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 153 SLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 153 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
-+..||..+++....... . ........|.++...++|++.+....+| +..|+..++
T Consensus 470 Gl~~~~~~~~~~~~~~~~---~-------~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~ 525 (781)
T 3v9f_A 470 GVFVIDLASKKVIHHYDT---S-------NSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQ 525 (781)
T ss_dssp EEEEEESSSSSCCEEECT---T-------TSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCC
T ss_pred ceEEEeCCCCeEEecccC---c-------ccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCC
Confidence 588898776543221110 0 0001135688999999888666554355 666776544
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.09 E-value=0.00051 Score=49.46 Aligned_cols=150 Identities=9% Similarity=0.046 Sum_probs=95.3
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEE-EEe----c--cCceEEEEE---ecCCcEEEecC--------------CCcEE
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAV-FKG----H--RKAVSYVKF---LNKEDIVSAST--------------DSQLK 58 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~-~~~----~--~~~i~~~~~---~~~~~l~s~~~--------------d~~v~ 58 (221)
+.++++.-..+.|..|+.. .+..... +.. . ...+..|.| .|++.|+.+.. +..|.
T Consensus 25 g~~~vs~l~~g~V~~~~~~-~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~ 103 (334)
T 2p9w_A 25 QVFYQSNLYKGRIEVYNPK-TQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFH 103 (334)
T ss_dssp TEEEEEETTTTEEEEECTT-TCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEE
T ss_pred CEEEEEeccCCEEEEEcCC-CCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEE
Confidence 4444554478999999986 3322222 221 0 113689999 46666555332 57799
Q ss_pred EEEcC---CCccceeee--cc-----------ccceeEEEEeCCCCEEEEecCC-CeEEEEECCCCeeeEEEEeecccce
Q psy10662 59 LWNIN---KPNCLRSFV--GH-----------INDKNFVGLATDGDYVACGSEN-NSLYIYYKGLSKHMHAYRFDTVRSM 121 (221)
Q Consensus 59 ~wd~~---~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~l~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~ 121 (221)
.||+. +++.+.... .. ......++..++|+..++++.. +.|...+.... .+..+..+..
T Consensus 104 ~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~--- 179 (334)
T 2p9w_A 104 SFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESG--- 179 (334)
T ss_dssp EEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCC---
T ss_pred EEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCC---
Confidence 99998 777665442 11 1247899999999988888877 87777666533 2222211100
Q ss_pred eEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662 122 LESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL 161 (221)
Q Consensus 122 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 161 (221)
........+.|+++|+|+.|++....|.+..+|+..
T Consensus 180 ----~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 180 ----NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp ----CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred ----CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 011122366899999999888877799999999873
No 289
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.06 E-value=0.00036 Score=51.90 Aligned_cols=150 Identities=10% Similarity=0.147 Sum_probs=92.8
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEec----cCceEEEEEecCCcEEEecCCCcEEEEEcCCCc----------cc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH----RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN----------CL 68 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~----------~~ 68 (221)
|..++.+ .++.||.-++.. ....+.++.. -+.|..+..+|++.+++-..+..|.|-.+..+. .+
T Consensus 32 ~t~i~~a-~~n~iR~~~i~~-~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 32 GTRIVFI-QDNIIRWYNVLT-DSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTEEEEE-ETTEEEEEETTT-CSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCEEEEE-ECCEEEEEECCC-CCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccccc
Confidence 3334443 346677667652 2234455533 225788999998887777788899999886321 01
Q ss_pred --eeeec------cccceeEEEEeCCC---CEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662 69 --RSFVG------HINDKNFVGLATDG---DYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG 137 (221)
Q Consensus 69 --~~~~~------~~~~v~~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 137 (221)
+.+.- ...+|..+.|||-+ ..|++-..|+.|++||+........ .++.... ..........+.+++
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~--~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNN--SFGLDARVNDITDLE 186 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCS--EEESCSSCCCEEEEE
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccc--ccCCCcccceEEEEE
Confidence 12221 24679999999964 4789999999999999986322111 1121111 011122336788999
Q ss_pred EecCCCEEEE--ecCCCeEEEE
Q psy10662 138 LATDGDYVAC--GSENNSLYIY 157 (221)
Q Consensus 138 ~~~~~~~l~~--~~~d~~i~~~ 157 (221)
|.+++-.|.+ .++.|-|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 9998876666 4478888755
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.06 E-value=0.0031 Score=51.33 Aligned_cols=178 Identities=8% Similarity=-0.076 Sum_probs=104.0
Q ss_pred CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCC----ccceeeeccccceeEEEEe
Q psy10662 11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKP----NCLRSFVGHINDKNFVGLA 84 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~----~~~~~~~~~~~~v~~~~~~ 84 (221)
....|+..++. .... ..+......+..|+|.+ ++. +++-...+.|+.+++... .....+.........|++.
T Consensus 402 n~~~Ir~i~l~-~~~~-~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 402 NRHEVRKMTLD-RSEY-TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp CBSSEEEECTT-SCCC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred cccceeEeecc-CCcc-eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 34567777776 3332 22333456678999986 455 445566788988888653 2222222233456789998
Q ss_pred CCCC-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCC
Q psy10662 85 TDGD-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGL 161 (221)
Q Consensus 85 ~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~ 161 (221)
+.+. ++++-...+.|.+.++...... .+ +.........|+++|.+..|+.... .+.|...++..
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~-~l------------~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVKRK-TL------------FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEE-EE------------EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCeEE-EE------------EeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 7764 5566667788999988744322 21 1122345788999997655555442 36788877754
Q ss_pred CCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662 162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI 218 (221)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~ 218 (221)
......+. ..-...+.|++++.+..|+.+ ...+.|...++..
T Consensus 547 ~~~~~lv~---------------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 547 VDIYSLVT---------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp CCEEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEe---------------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 33221111 112356788998766555554 4567788888754
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.96 E-value=0.0019 Score=46.95 Aligned_cols=147 Identities=12% Similarity=0.193 Sum_probs=93.4
Q ss_pred CCeEEEEEecCCceeeEEEEe------cc-CceEEEEE--ec-CC--cEEEecCCCcEEEEEcC-------CCccceeee
Q psy10662 12 DHCVHYYDLRNTKEALAVFKG------HR-KAVSYVKF--LN-KE--DIVSASTDSQLKLWNIN-------KPNCLRSFV 72 (221)
Q Consensus 12 dg~i~i~~~~~~~~~~~~~~~------~~-~~i~~~~~--~~-~~--~l~s~~~d~~v~~wd~~-------~~~~~~~~~ 72 (221)
+++|.+|++......+..+.. .. ..+..+++ +| .+ +++....+|.+..|++. +.+.++.+.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 579999988533333444421 11 45667777 55 34 47788889999999983 335566664
Q ss_pred ccccceeEEEEeCCCCEEEEecCCCeEEEEECC-----CCeeeEEEEeecccceeEeeEEEeeCceEEEEE--ecCCC-E
Q psy10662 73 GHINDKNFVGLATDGDYVACGSENNSLYIYYKG-----LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL--ATDGD-Y 144 (221)
Q Consensus 73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~ 144 (221)
..+.+..+...+....|+.+-++.-|..+|.+ +.+.+..+ ........+..+++ .++++ +
T Consensus 178 -lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~-----------~~g~l~aDvEGLai~~~~~g~gy 245 (355)
T 3amr_A 178 -MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA-----------DGRHLTRDIEGLTIYYAADGKGY 245 (355)
T ss_dssp -CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEB-----------SSSSBCSCEEEEEEEECGGGCEE
T ss_pred -CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEe-----------cCCccccCcceEEEEecCCCCEE
Confidence 34578899999988899999988777777754 22222211 00111235677777 45555 5
Q ss_pred EEEec-CCCeEEEEEcC-CCCceeeeee
Q psy10662 145 VACGS-ENNSLYIYYKG-LSKHMHAYRF 170 (221)
Q Consensus 145 l~~~~-~d~~i~~~d~~-~~~~~~~~~~ 170 (221)
|++++ .+....+||.+ +.+.+..+..
T Consensus 246 LivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 246 LMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp EEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 65555 56799999996 5666666643
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.94 E-value=0.0001 Score=59.04 Aligned_cols=157 Identities=6% Similarity=-0.144 Sum_probs=85.3
Q ss_pred eEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec-CC-CeEEEEECCCCeeeEE
Q psy10662 37 VSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS-EN-NSLYIYYKGLSKHMHA 112 (221)
Q Consensus 37 i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~v~iwd~~~~~~~~~ 112 (221)
...|++.+ ++. +++-...+.|.++++........+.........+++.|.+.+|+.+. .. +.|..+++...... .
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-~ 533 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-S 533 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-E
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-E
Confidence 45677763 444 45556678899999865433322222223457889998665444433 22 66777665432111 1
Q ss_pred EEeecccceeEeeEEEeeCceEEEEEecCCCE-EEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccccee
Q psy10662 113 YRFDTVRSMLESSFVGHINDKNFVGLATDGDY-VACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVS 191 (221)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 191 (221)
+ ..........|+|+|++.. +++-...+.|..+++........+. .........
T Consensus 534 l------------~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~-------------~~~~~~~P~ 588 (699)
T 1n7d_A 534 L------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-------------DEKRLAHPF 588 (699)
T ss_dssp E------------SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECC-------------CSSSCSSCC
T ss_pred E------------EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEe-------------cCCcCCCce
Confidence 0 0111234667999987554 4555566789999876432211110 000111223
Q ss_pred EEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 192 AVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 192 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.+++..+ .++++....+.|..++..+++
T Consensus 589 glavd~~-~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 589 SLAVFED-KVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp CCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred EeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence 4555544 555565667889888876543
No 293
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.93 E-value=0.00016 Score=57.62 Aligned_cols=182 Identities=10% Similarity=0.060 Sum_probs=91.0
Q ss_pred CCCceEEEEe-CC-----CeEEEEEecCCceeeEEEEecc-CceE----EEEEe-cCCcEEEecCC---------CcEEE
Q psy10662 1 MNSCHLAFGS-AD-----HCVHYYDLRNTKEALAVFKGHR-KAVS----YVKFL-NKEDIVSASTD---------SQLKL 59 (221)
Q Consensus 1 ~~~~~l~~~~-~d-----g~i~i~~~~~~~~~~~~~~~~~-~~i~----~~~~~-~~~~l~s~~~d---------~~v~~ 59 (221)
+++++++.|+ .+ ..+.+||.. +.+ -..+.... .+.. ...+. .+..++.++.+ ..+..
T Consensus 296 ~dg~iyv~GG~~~~~~~~~~~e~yd~~-t~~-W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~ 373 (656)
T 1k3i_A 296 SDGRVFTIGGSWSGGVFEKNGEVYSPS-SKT-WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNW 373 (656)
T ss_dssp TTSCEEEECCCCCSSSCCCCEEEEETT-TTE-EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEE
T ss_pred cCCeEEEEeCcccCCcccccceEeCCC-CCc-ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceee
Confidence 4788889988 34 468999987 332 11111000 0000 00111 12233444333 45678
Q ss_pred EEcCCCccceeeeccc---------cceeEEEEeC-CCCEEEEecCCC-----------eEEEEECCCCeeeEEEEeecc
Q psy10662 60 WNINKPNCLRSFVGHI---------NDKNFVGLAT-DGDYVACGSENN-----------SLYIYYKGLSKHMHAYRFDTV 118 (221)
Q Consensus 60 wd~~~~~~~~~~~~~~---------~~v~~~~~~~-~~~~l~~~~~d~-----------~v~iwd~~~~~~~~~~~~~~~ 118 (221)
||..+.........+. ..-.++.|.. ++++++.|+.++ .+.+||..+.+.....
T Consensus 374 yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~----- 448 (656)
T 1k3i_A 374 YYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA----- 448 (656)
T ss_dssp EECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC-----
T ss_pred eecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc-----
Confidence 8887665433222111 1223444433 667778887532 5677777665432210
Q ss_pred cceeEeeEEEeeCceEEEEEecCCCEEEEecCC-----------CeEEEEEcCCCCceeeeeeecccccccccccccccc
Q psy10662 119 RSMLESSFVGHINDKNFVGLATDGDYVACGSEN-----------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTN 187 (221)
Q Consensus 119 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (221)
.. .+. ....-.++...|++++++.|+.+ ..+.+||..+.+-.. ........
T Consensus 449 ~~----~mp-~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~-------------~~~~~~~R 510 (656)
T 1k3i_A 449 SN----GLY-FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK-------------QNPNSIVR 510 (656)
T ss_dssp TT----CCS-SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE-------------CCCCSSCC
T ss_pred cC----CCC-CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee-------------cCCCCCcc
Confidence 00 000 01112244567899999999864 457788876543211 11111111
Q ss_pred cceeEEEEcCCCcEEEEecC
Q psy10662 188 EFVSAVCWRQLSRVLVAANS 207 (221)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~~~ 207 (221)
.......+.|+|++++.|+.
T Consensus 511 ~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 511 VYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CTTEEEEECTTSCEEEEECC
T ss_pred ccccHhhcCCCcEEEecCCC
Confidence 12234556799999999885
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.92 E-value=6.9e-05 Score=60.05 Aligned_cols=178 Identities=7% Similarity=-0.058 Sum_probs=97.1
Q ss_pred CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEEEe-cCCCcEEEEEcCC----CccceeeeccccceeEEEEe
Q psy10662 11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIVSA-STDSQLKLWNINK----PNCLRSFVGHINDKNFVGLA 84 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~s~-~~d~~v~~wd~~~----~~~~~~~~~~~~~v~~~~~~ 84 (221)
..+.|+..++. .......+. ....+..|+|.+ ++.|+.+ ...+.|+.+++.. ......+.........+++.
T Consensus 384 ~~~~I~~id~~-~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 384 NRHEVRKMTLD-RSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp CTTC-CEECTT-SCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred CccceEEEeCC-CCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 34567777776 333322222 234567889986 4555544 4568899999875 22222222112234678887
Q ss_pred CC-CCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCC
Q psy10662 85 TD-GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGL 161 (221)
Q Consensus 85 ~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~ 161 (221)
+. ++++++-...+.|.++++........+ .........++++|.+.+|+.... .+.|..+++..
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~-------------~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLF-------------REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 528 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEEC-------------CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEE-------------eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence 54 455566566788999887654322111 111234567888986555554432 25677666543
Q ss_pred CCceeeeeeecccccccccccccccccceeEEEEcCCCcEE-EEecCCCeEEEEECCc
Q psy10662 162 SKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL-VAANSQGIIKIYVIPI 218 (221)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~ 218 (221)
.... .+. ...-...+.|+|+|++..| ++-+..+.|..+++..
T Consensus 529 ~~~~-~l~--------------~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 529 VDIY-SLV--------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CCCC-EES--------------CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CCee-EEE--------------eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 2111 000 0112245689999875555 4445677899888864
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.90 E-value=0.0042 Score=47.52 Aligned_cols=154 Identities=7% Similarity=-0.012 Sum_probs=82.0
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEEEec---cCceEEEEE-------ecCCc-EEEecCCC-------cEEEEEcCC-
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVFKGH---RKAVSYVKF-------LNKED-IVSASTDS-------QLKLWNINK- 64 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~---~~~i~~~~~-------~~~~~-l~s~~~d~-------~v~~wd~~~- 64 (221)
+++++-...+.|++.|+. .+......... ......|+| ++++. |+.+...+ .|.+++...
T Consensus 153 ~Lyv~~~~~~~i~~ID~~-~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 153 HLYICYDGHKAIQLIDLK-NRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEEETEEEEEEEETT-TTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred EEEEEECCCCeEEEEECC-CCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 344444444678888876 44433333221 125899999 87543 66665543 256665433
Q ss_pred Cccc-----eeeeccccceeEEEEeCC-CCEEEEecCCCeEEEEECC-------CCeeeEEEE-eecccceeEeeEEEee
Q psy10662 65 PNCL-----RSFVGHINDKNFVGLATD-GDYVACGSENNSLYIYYKG-------LSKHMHAYR-FDTVRSMLESSFVGHI 130 (221)
Q Consensus 65 ~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~iwd~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~ 130 (221)
+... ..+... .....++++|+ +.++++-..++.|..+|+. +++.-.... +.......+.. .+..
T Consensus 232 G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~-~~~~ 309 (496)
T 3kya_A 232 GTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFT-IADP 309 (496)
T ss_dssp SCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEE-CSSS
T ss_pred CceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEe-cCCC
Confidence 2222 222222 23467888994 5556677788889999986 443200000 00000000000 1122
Q ss_pred CceEEEEEecCCCEE-EEecCCCeEEEEEcC
Q psy10662 131 NDKNFVGLATDGDYV-ACGSENNSLYIYYKG 160 (221)
Q Consensus 131 ~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~ 160 (221)
.....++|+|+|+.| ++-.....|+.++..
T Consensus 310 ~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 310 SWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 346789999999954 444567788887654
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.88 E-value=0.004 Score=47.65 Aligned_cols=169 Identities=8% Similarity=0.038 Sum_probs=91.0
Q ss_pred eEEEEEec--CCcEEEecC-CCcEEEEEcCCCccceeeecc---ccceeEEEE-------eCCCCEEEEecCCC------
Q psy10662 37 VSYVKFLN--KEDIVSAST-DSQLKLWNINKPNCLRSFVGH---INDKNFVGL-------ATDGDYVACGSENN------ 97 (221)
Q Consensus 37 i~~~~~~~--~~~l~s~~~-d~~v~~wd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~d~------ 97 (221)
...|+|.| ++.|+.+.. .+.|++.|+.++......... ......++| ++++++++.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 46788886 355555544 467888998776554433221 235789999 99998655554433
Q ss_pred -eEEEEECCC-CeeeEEEEeecccceeEeeEEEeeCceEEEEEec-CCCEEEEecCCCeEEEEEcC-------CCCceee
Q psy10662 98 -SLYIYYKGL-SKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT-DGDYVACGSENNSLYIYYKG-------LSKHMHA 167 (221)
Q Consensus 98 -~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~-------~~~~~~~ 167 (221)
.|.+++... ++... ...... +.. -.....++++| ++.++++-..++.|+.+|+. ++..-..
T Consensus 221 ~~V~~i~r~~~G~~~~-----~~~~~~---v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 221 PSVYIIKRNADGTFDD-----RSDIQL---IAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp EEEEEEECCTTSCCST-----TSCEEE---EEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred ceEEEEecCCCCceee-----ccccee---ecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence 255555332 11100 000011 111 22445788899 55556666678889999987 4432000
Q ss_pred eeeecccccccccccccccccceeEEEEcCCCcEEEE-ecCCCeEEEEEC
Q psy10662 168 YRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVA-ANSQGIIKIYVI 216 (221)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iw~~ 216 (221)
+...... ....+... +.......++|+|+|++|+. -+..+.|+.++.
T Consensus 292 ~~~~~~g-~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 292 IVKNNPN-TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp BGGGCTT-TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccccccc-ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 0000000 00000001 11234578999999996544 456788888664
No 297
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.85 E-value=0.0044 Score=46.29 Aligned_cols=158 Identities=6% Similarity=-0.139 Sum_probs=92.4
Q ss_pred CceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec--CCCeEEEEECCCCeee
Q psy10662 35 KAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGLSKHM 110 (221)
Q Consensus 35 ~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~ 110 (221)
.....+++.+ ++. +++-...+.|.+.++........+.........+++.|.+.+|+... ..+.|...++......
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 4567888875 444 44556678899999865543333332334578999999666554433 2467887777543221
Q ss_pred EEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccc
Q psy10662 111 HAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEF 189 (221)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (221)
.. ....-.....++++|++..|..+. ..+.|..+|+.......... . ......
T Consensus 239 ~~-------------~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~------------~~~l~~ 292 (400)
T 3p5b_L 239 SL-------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-D------------EKRLAH 292 (400)
T ss_dssp EE-------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEE-C------------SSTTSS
T ss_pred EE-------------EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEe-C------------CCCCCC
Confidence 11 111224678899998776665554 56789999876433222111 0 001112
Q ss_pred eeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 190 VSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 190 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
..++++. .+.++++-...+.|..++..+|
T Consensus 293 P~gl~v~-~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 293 PFSLAVF-EDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp EEEEEEE-TTEEEEEESSSCSEEEEESSSC
T ss_pred CEEEEEe-CCEEEEecCCCCeEEEEEcCCC
Confidence 3456663 3455666666788888886555
No 298
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.85 E-value=0.0033 Score=44.76 Aligned_cols=187 Identities=15% Similarity=0.110 Sum_probs=90.2
Q ss_pred CCceEEEEeCC-----CeEEEEEecCCc----eeeEEEEeccCceEEEEEecCCcEEEecCC-----CcEEEEEcCCCcc
Q psy10662 2 NSCHLAFGSAD-----HCVHYYDLRNTK----EALAVFKGHRKAVSYVKFLNKEDIVSASTD-----SQLKLWNINKPNC 67 (221)
Q Consensus 2 ~~~~l~~~~~d-----g~i~i~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d-----~~v~~wd~~~~~~ 67 (221)
++.+++.|+.+ ..+.+||+.+.. +.+..+...... .+++...+..++.|+.+ ..+.+||+.+.+-
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL-AGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS-CEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc-eeEEEECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 35566777654 358888876322 111111111111 22222344455666543 3578889876543
Q ss_pred cee--eeccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662 68 LRS--FVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT 140 (221)
Q Consensus 68 ~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 140 (221)
... +...... .++.. .++++++.|+.+ ..+.+||+.+.+....- .+.........+ .-
T Consensus 141 ~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-----------~~p~~r~~~~~~--~~ 205 (301)
T 2vpj_A 141 SMLGDMQTAREG-AGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT-----------PMATKRSGAGVA--LL 205 (301)
T ss_dssp EEEEECSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEEC-----------CCSSCCBSCEEE--EE
T ss_pred EECCCCCCCccc-ceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCC-----------CCCcccccceEE--EE
Confidence 321 1111111 12222 256677777654 45888888776543221 011001111112 22
Q ss_pred CCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----Ce
Q psy10662 141 DGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-----GI 210 (221)
Q Consensus 141 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~ 210 (221)
++++++.|+.+ ..+.+||+.+.+-... ... .........+.+ ++++++.|+.+ ..
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~------~~~-------p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~ 270 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV------TSM-------TTPRCYVGATVL--RGRLYAIAGYDGNSLLSS 270 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEEEE------CCC-------SSCCBSCEEEEE--TTEEEEECCBCSSSBEEE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCcEEEC------CCC-------CCcccceeEEEE--CCEEEEEcCcCCCccccc
Confidence 56777778764 4578888776543211 110 001111122222 67777777754 46
Q ss_pred EEEEECCcc
Q psy10662 211 IKIYVIPIR 219 (221)
Q Consensus 211 i~iw~~~~~ 219 (221)
+.+||+.+.
T Consensus 271 v~~yd~~~~ 279 (301)
T 2vpj_A 271 IECYDPIID 279 (301)
T ss_dssp EEEEETTTT
T ss_pred EEEEcCCCC
Confidence 788888764
No 299
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.83 E-value=0.0069 Score=48.02 Aligned_cols=179 Identities=7% Similarity=-0.058 Sum_probs=106.9
Q ss_pred CCCeEEEEEecCCceeeEEEE-eccCceEEEEEec-CCcE-EEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCC
Q psy10662 11 ADHCVHYYDLRNTKEALAVFK-GHRKAVSYVKFLN-KEDI-VSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDG 87 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~l-~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~ 87 (221)
..+.|+..+++. ......+. ..-..+..|+|++ ++.+ ++-..++.|..+++........+.........+++.+.+
T Consensus 13 ~~~~I~~i~l~~-~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~ 91 (628)
T 4a0p_A 13 RRADIRRISLET-NNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLG 91 (628)
T ss_dssp ETTEEEEEESSC-TTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTT
T ss_pred eCCcEEEEECCC-CCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCC
Confidence 567899999973 32222222 1234678999996 4554 455668899999986543333232222356788888655
Q ss_pred C-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEec--CCCeEEEEEcCCCCc
Q psy10662 88 D-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGS--ENNSLYIYYKGLSKH 164 (221)
Q Consensus 88 ~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~ 164 (221)
. ++++-...+.|.+.++..... ..+ ....-.....++++|....|.... ..+.|...++.....
T Consensus 92 ~~LY~tD~~~~~I~v~~~dG~~~-~~l------------~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 92 KNLYWADTGTNRIEVSKLDGQHR-QVL------------VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER 158 (628)
T ss_dssp TEEEEEETTTTEEEEEETTSTTC-EEE------------ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CEEEEEECCCCEEEEEecCCCcE-EEE------------EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence 4 556666678899998864322 111 112234567899998555555444 346677776654332
Q ss_pred eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCcc
Q psy10662 165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPIR 219 (221)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~ 219 (221)
.... ..-...+.++++++++.|+.+ ...+.|...++...
T Consensus 159 ~~l~----------------~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 159 TTLV----------------PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp EEEE----------------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEE----------------CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 1111 112346789999976655554 45778888887653
No 300
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.79 E-value=0.0043 Score=44.32 Aligned_cols=186 Identities=13% Similarity=0.091 Sum_probs=89.6
Q ss_pred CCceEEEEeCC----CeEEEEEecCCceeeEEEEeccC--ceEEEEEecCCcEEEecCC------CcEEEEEcCCCccce
Q psy10662 2 NSCHLAFGSAD----HCVHYYDLRNTKEALAVFKGHRK--AVSYVKFLNKEDIVSASTD------SQLKLWNINKPNCLR 69 (221)
Q Consensus 2 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~l~s~~~d------~~v~~wd~~~~~~~~ 69 (221)
++.+++.|+.+ ..+.+||+. +.+- ..+..-.. .-.+++...+..++.|+.+ ..+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~-~~~W-~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVV-KDSW-YSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETT-TTEE-EEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCC-CCeE-EECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 35566777654 567888876 3321 11111111 1112222344556666654 458889987764322
Q ss_pred e--eeccccceeEEEEeCCCCEEEEecC---------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEE
Q psy10662 70 S--FVGHINDKNFVGLATDGDYVACGSE---------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL 138 (221)
Q Consensus 70 ~--~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 138 (221)
. +...... .++.. -++++++.|+. -..+.+||+.+.+....- .+......- ++..
T Consensus 133 ~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~-----------~~p~~r~~~-~~~~ 198 (306)
T 3ii7_A 133 KPSMLTQRCS-HGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC-----------PMIEARKNH-GLVF 198 (306)
T ss_dssp ECCCSSCCBS-CEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC-----------CCSSCCBSC-EEEE
T ss_pred CCCCcCCcce-eEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC-----------Cccchhhcc-eEEE
Confidence 1 1111111 12222 25666666653 345788888877543221 001001111 1111
Q ss_pred ecCCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----
Q psy10662 139 ATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ----- 208 (221)
Q Consensus 139 ~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 208 (221)
-++++++.|+.+ ..+.+||..+.+-.. .. ...........+.+ ++++++.|+.+
T Consensus 199 -~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~------~~-------~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~ 262 (306)
T 3ii7_A 199 -VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM------VS-------PMPWKGVTVKCAAV--GSIVYVLAGFQGVGRL 262 (306)
T ss_dssp -ETTEEEEECCEETTEEBCCEEEEETTTTEEEE------CC-------CCSCCBSCCEEEEE--TTEEEEEECBCSSSBC
T ss_pred -ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEE------CC-------CCCCCccceeEEEE--CCEEEEEeCcCCCeee
Confidence 256777777754 356777776553211 11 11111111222333 67777877743
Q ss_pred CeEEEEECCcc
Q psy10662 209 GIIKIYVIPIR 219 (221)
Q Consensus 209 g~i~iw~~~~~ 219 (221)
..+.+||+.+.
T Consensus 263 ~~~~~yd~~~~ 273 (306)
T 3ii7_A 263 GHILEYNTETD 273 (306)
T ss_dssp CEEEEEETTTT
T ss_pred eeEEEEcCCCC
Confidence 56888888765
No 301
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.75 E-value=0.0059 Score=44.72 Aligned_cols=155 Identities=9% Similarity=0.097 Sum_probs=85.4
Q ss_pred ceEEEEEecCCcEEEec-------------CCCcEEEEEcCCCc-ccee--eec-----cccceeEEEEeC--CCC-EE-
Q psy10662 36 AVSYVKFLNKEDIVSAS-------------TDSQLKLWNINKPN-CLRS--FVG-----HINDKNFVGLAT--DGD-YV- 90 (221)
Q Consensus 36 ~i~~~~~~~~~~l~s~~-------------~d~~v~~wd~~~~~-~~~~--~~~-----~~~~v~~~~~~~--~~~-~l- 90 (221)
..-.++..|++.+++++ .+|.|.++|..+.. .... +.+ ..-....+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34566667777766665 68999999987431 1112 222 122456666655 343 33
Q ss_pred EEecC--CCeEEEEECCCCeeeEEEEeecccceeEeeEEEe-eCceEEEEEecCCCEEEEecC-----------------
Q psy10662 91 ACGSE--NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGH-INDKNFVGLATDGDYVACGSE----------------- 150 (221)
Q Consensus 91 ~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~----------------- 150 (221)
++-.. +..|.+|++........ .+..+.+. -...+.+.+.++|.+.++..-
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~---------~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~ 201 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLL---------HLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLA 201 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEE---------EEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCC
T ss_pred EEECCCCCCeEEEEEEECCCCEEE---------EEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCC
Confidence 33222 45677776543221111 11222221 235778999999987776541
Q ss_pred CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec-CCCeEEEEECC
Q psy10662 151 NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN-SQGIIKIYVIP 217 (221)
Q Consensus 151 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~ 217 (221)
.|.|+-+|. ++.. .+ ...-...+.++|+||++.|+.+. ..+.|..|++.
T Consensus 202 ~g~vyr~d~--~~~~-~~---------------~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 202 WSFVTYYSP--NDVR-VV---------------AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp CEEEEEECT--TCCE-EE---------------EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ccEEEEEEC--CeEE-Ee---------------ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 133433332 1111 10 01123468999999998777654 57899999986
No 302
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.75 E-value=0.012 Score=48.00 Aligned_cols=159 Identities=7% Similarity=-0.133 Sum_probs=90.0
Q ss_pred cCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec-C-CCeEEEEECCCCee
Q psy10662 34 RKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS-E-NNSLYIYYKGLSKH 109 (221)
Q Consensus 34 ~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~v~iwd~~~~~~ 109 (221)
......|++.+ ++. +++-...+.|.+.++........+.........|++.|.+.+|+.+. . .+.|...++.....
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~ 549 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 549 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce
Confidence 34567788875 434 55666788999999865443332333334578999999765554433 3 36788888764332
Q ss_pred eEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCceeeeeeeccccccccccccccccc
Q psy10662 110 MHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNE 188 (221)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (221)
. .+ ..........|++++.+..|+.+ ...+.|..+++........+. .. ..-.
T Consensus 550 ~-~l------------v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~-~~------------~~l~ 603 (791)
T 3m0c_C 550 Y-SL------------VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-DE------------KRLA 603 (791)
T ss_dssp E-EE------------ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE-CT------------TTTS
T ss_pred E-EE------------EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEec-CC------------CccC
Confidence 2 11 11223467889999766665555 445678888875443322221 00 0111
Q ss_pred ceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 189 FVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 189 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
...+|++.. ++++++-...+.|...+..+|
T Consensus 604 ~P~glav~~-~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 604 HPFSLAVFE-DKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp SEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred CCCEEEEeC-CEEEEEECCCCEEEEEeCCCC
Confidence 233555533 344455556677777775544
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.74 E-value=0.0056 Score=44.31 Aligned_cols=159 Identities=9% Similarity=0.000 Sum_probs=83.5
Q ss_pred ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee-eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeE
Q psy10662 33 HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMH 111 (221)
Q Consensus 33 ~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~ 111 (221)
....+..+.+.+++.++..+.+|.+..-+-..++.-..+ ......+..+.+.+++..++ ++.+|.+.+.+...++.-.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWG 239 (327)
T ss_dssp CCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEEC
T ss_pred CCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeE
Confidence 445688899988777666666666544321112221111 22345678888998887654 4457777665422222211
Q ss_pred EEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeeccccccccccccccccccee
Q psy10662 112 AYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVS 191 (221)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 191 (221)
.+ ... .+ .....+..+.+.+++.+++++. ++.+ ++..+.++.- ............+.
T Consensus 240 ~~-----~~~---~~-~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW------------~~~~~~~~~~~~~~ 296 (327)
T 2xbg_A 240 EL-----LSP---LR-RNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTW------------QQDVDVKKVPSNFY 296 (327)
T ss_dssp CC-----BCT---TS-SCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSC------------EECGGGTTSSSCCC
T ss_pred ec-----cCC---cc-cCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCccc------------EEcCccCCCCCCeE
Confidence 10 000 00 0123477888888877766655 5655 2333323211 11111111234567
Q ss_pred EEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662 192 AVCWRQLSRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 192 ~~~~~~~~~~l~~~~~dg~i~iw~~ 216 (221)
.+.|.+++. +++++.+|.|.-++-
T Consensus 297 ~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 297 KILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp EEEEEETTE-EEEECSTTEEEEECC
T ss_pred EEEEECCCc-eEEEcCCceEEEEcC
Confidence 888876655 555567888776653
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.72 E-value=0.0065 Score=44.48 Aligned_cols=167 Identities=12% Similarity=0.167 Sum_probs=93.2
Q ss_pred CCCeEEEEEecCCceeeEE--EEe-----ccCceEEEEEec--CC--cEEEec---CCCcEEEEEcCCCcc----ceeee
Q psy10662 11 ADHCVHYYDLRNTKEALAV--FKG-----HRKAVSYVKFLN--KE--DIVSAS---TDSQLKLWNINKPNC----LRSFV 72 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~--~~~-----~~~~i~~~~~~~--~~--~l~s~~---~d~~v~~wd~~~~~~----~~~~~ 72 (221)
.+|.|.++|+.+....... +.+ ..-....+.+.+ ++ +|+.+. .+.++.+|++..... +..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6899999998632111222 222 223567777754 23 354442 256788888765322 22222
Q ss_pred cc-ccceeEEEEeCCCCEEEEecC-----------------CCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceE
Q psy10662 73 GH-INDKNFVGLATDGDYVACGSE-----------------NNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKN 134 (221)
Q Consensus 73 ~~-~~~v~~~~~~~~~~~l~~~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 134 (221)
+. -...+.+.+.++|.+.++... .|.|.-+|.. + ...+...-...+
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~--------------~~~~~~~l~~pN 224 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D--------------VRVVAEGFDFAN 224 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C--------------CEEEEEEESSEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e--------------EEEeecCCcccC
Confidence 21 235788999999987776541 1333333331 1 111233345678
Q ss_pred EEEEecCCCEEEEec-CCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcC-CCcEEEEec
Q psy10662 135 FVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQ-LSRVLVAAN 206 (221)
Q Consensus 135 ~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 206 (221)
.++|+||++.++.+. ..+.|..|++.....+...+ .. ......-.+++++ +|++.+++.
T Consensus 225 Gia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~------~~-------~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 225 GINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLR------VL-------SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE------EE-------ECSSEEEEEEECTTTCCEEEEEE
T ss_pred cceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCE------EE-------eCCCCCceEEEeCCCCcEEEEec
Confidence 999999998776554 57889999986432221111 00 0123456788888 588777554
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.67 E-value=0.013 Score=46.37 Aligned_cols=180 Identities=13% Similarity=0.059 Sum_probs=100.6
Q ss_pred CCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCcEE-EecCCCcEEEEEcCCCccce-eeeccccceeEEEEeCCC
Q psy10662 11 ADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KEDIV-SASTDSQLKLWNINKPNCLR-SFVGHINDKNFVGLATDG 87 (221)
Q Consensus 11 ~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~l~-s~~~d~~v~~wd~~~~~~~~-~~~~~~~~v~~~~~~~~~ 87 (221)
..+.|+..++.........+...-.....++|++ ++.|+ +-...+.|..+++....... .+...-.....+++.+.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 5678999888732212222223345678999996 55555 44457788888886553222 222222457889999855
Q ss_pred C-EEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC--CCeEEEEEcCCCCc
Q psy10662 88 D-YVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE--NNSLYIYYKGLSKH 164 (221)
Q Consensus 88 ~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~ 164 (221)
. ++++-...+.|.+.++..... ..+ ....-.....++++|.+..|..... .+.|...++.-...
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~-~~l------------~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~ 162 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLR-KVL------------FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 162 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC-EEE------------ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CEEEEEeCCCCEEEEEECCCCCE-EEE------------EeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce
Confidence 4 556666788999999865432 111 1122345678999987555544442 35666665543222
Q ss_pred eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEe-cCCCeEEEEECCc
Q psy10662 165 MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAA-NSQGIIKIYVIPI 218 (221)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~ 218 (221)
..... ..-...+.+++++++..|+.+ ...+.|...++..
T Consensus 163 ~~l~~---------------~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 163 FIIIN---------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp EEEEC---------------SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred EEEEe---------------CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 11110 112346789999876555554 4567888887764
No 306
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.65 E-value=0.0074 Score=42.96 Aligned_cols=186 Identities=15% Similarity=0.161 Sum_probs=88.0
Q ss_pred CCceEEEEeCC-----CeEEEEEecCCce--eeEEEEeccCceEEEEEecCCcEEEecCCC-----cEEEEEcCCCccce
Q psy10662 2 NSCHLAFGSAD-----HCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNKEDIVSASTDS-----QLKLWNINKPNCLR 69 (221)
Q Consensus 2 ~~~~l~~~~~d-----g~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~-----~v~~wd~~~~~~~~ 69 (221)
++.+++.|+.+ ..+.+||.. +.+ .+..+...... .+++...+..++.|+.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPV-KDQWTSVANMRDRRST-LGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETT-TTEEEEECCCSSCCBS-CEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCC-CCceeeCCCCCccccc-eEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 34566676654 357788876 322 11111111111 222233455566666543 47788887654322
Q ss_pred e--eeccccceeEEEEeCCCCEEEEecCC-------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEec
Q psy10662 70 S--FVGHINDKNFVGLATDGDYVACGSEN-------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLAT 140 (221)
Q Consensus 70 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 140 (221)
. +...... .+++. -++++++.|+.+ ..+.+||+.+.+....- .+....... ++. .-
T Consensus 139 ~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-----------~~p~~r~~~-~~~-~~ 203 (302)
T 2xn4_A 139 VAPMNTRRSS-VGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-----------EMSTRRSGA-GVG-VL 203 (302)
T ss_dssp ECCCSSCCBS-CEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-----------CCSSCCBSC-EEE-EE
T ss_pred cCCCCCcccC-ceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-----------CCccccccc-cEE-EE
Confidence 1 1111111 12222 255666666542 34788888776543221 011001111 121 22
Q ss_pred CCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC-----e
Q psy10662 141 DGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG-----I 210 (221)
Q Consensus 141 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~ 210 (221)
++++++.|+.+ ..+.+||..+.+-... ..... ....| ..+. .++++++.|+.++ .
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~------~~~~~---~r~~~----~~~~--~~~~i~v~GG~~~~~~~~~ 268 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV------ADMNM---CRRNA----GVCA--VNGLLYVVGGDDGSCNLAS 268 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEE------CCCSS---CCBSC----EEEE--ETTEEEEECCBCSSSBCCC
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeC------CCCCC---ccccC----eEEE--ECCEEEEECCcCCCccccc
Confidence 56777877764 3577888766532211 11100 00111 1222 2677777777543 4
Q ss_pred EEEEECCcc
Q psy10662 211 IKIYVIPIR 219 (221)
Q Consensus 211 i~iw~~~~~ 219 (221)
+.+||+.+.
T Consensus 269 v~~yd~~~~ 277 (302)
T 2xn4_A 269 VEYYNPTTD 277 (302)
T ss_dssp EEEEETTTT
T ss_pred EEEEcCCCC
Confidence 888988764
No 307
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.63 E-value=0.015 Score=46.01 Aligned_cols=180 Identities=9% Similarity=-0.053 Sum_probs=94.6
Q ss_pred CCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCE
Q psy10662 12 DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDY 89 (221)
Q Consensus 12 dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 89 (221)
.+.|..++++........+...-.....+++.+ ++. +++-...+.|.+.++........+...-.....+++.|.+.+
T Consensus 61 ~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ 140 (619)
T 3s94_A 61 EEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGF 140 (619)
T ss_dssp TTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTE
T ss_pred CCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCe
Confidence 445555555421111222222224678899986 454 445566889999998654332222233345678999987655
Q ss_pred EEEec--CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcCCCCcee
Q psy10662 90 VACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKGLSKHMH 166 (221)
Q Consensus 90 l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~ 166 (221)
|+.+. ..+.|...++..... ..+ ....-.....+++++++..|..+ ...+.|..+|+.......
T Consensus 141 ly~tD~g~~~~I~r~~~dG~~~-~~l------------~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~ 207 (619)
T 3s94_A 141 MYWTDWGEVPKIERAGMDGSSR-FII------------INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA 207 (619)
T ss_dssp EEEEECSSSCEEEEEETTSCSC-EEE------------ECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-
T ss_pred EEEeccCCCCEEEEEECCCCce-EEE------------EeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEE
Confidence 44333 245666666543221 111 11123457789999876555544 455678888775432211
Q ss_pred eeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 167 AYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
... +......++++.++ .+.++-...+.|...|..+++
T Consensus 208 ~~~---------------~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 208 VVK---------------GSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp -----------------------CCCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred EEe---------------CCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence 110 00111245677655 444554567788888876653
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.55 E-value=0.01 Score=42.19 Aligned_cols=186 Identities=15% Similarity=0.107 Sum_probs=89.8
Q ss_pred CCceEEEEe-CC-----CeEEEEEecCCce--eeEEEEeccCceEEEEEecCCcEEEecCC-----CcEEEEEcCCCc--
Q psy10662 2 NSCHLAFGS-AD-----HCVHYYDLRNTKE--ALAVFKGHRKAVSYVKFLNKEDIVSASTD-----SQLKLWNINKPN-- 66 (221)
Q Consensus 2 ~~~~l~~~~-~d-----g~i~i~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~l~s~~~d-----~~v~~wd~~~~~-- 66 (221)
++.+++.|+ .+ ..+.+||+. +.+ .+..+..... -.+++...+..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~-~~~W~~~~~~p~~r~-~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPK-TQEWSFLPSITRKRR-YVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETT-TTEEEECCCCSSCCB-SCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCC-CCeEEeCCCCChhhc-cccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 345677776 33 368888886 332 1111111111 122233345556666654 468899987765
Q ss_pred -ccee--eeccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEE
Q psy10662 67 -CLRS--FVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGL 138 (221)
Q Consensus 67 -~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 138 (221)
-... +...... .++.. .++.+++.|+.+ ..+.+||+.+.+....- .+......-..+
T Consensus 92 ~W~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-----------~~p~~r~~~~~~-- 156 (301)
T 2vpj_A 92 VWYSVAPMNVRRGL-AGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG-----------DMQTAREGAGLV-- 156 (301)
T ss_dssp CCEEECCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE-----------ECSSCCBSCEEE--
T ss_pred eeEECCCCCCCccc-eeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECC-----------CCCCCcccceEE--
Confidence 2221 1111111 12222 256667777643 35788888776543221 011001111112
Q ss_pred ecCCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----
Q psy10662 139 ATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ----- 208 (221)
Q Consensus 139 ~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 208 (221)
.-++++++.|+.+ ..+.+||..+.+-... ... .........+.+ ++++++.|+.+
T Consensus 157 ~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~------~~~-------p~~r~~~~~~~~--~~~i~v~GG~~~~~~~ 221 (301)
T 2vpj_A 157 VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV------TPM-------ATKRSGAGVALL--NDHIYVVGGFDGTAHL 221 (301)
T ss_dssp EETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE------CCC-------SSCCBSCEEEEE--TTEEEEECCBCSSSBC
T ss_pred EECCEEEEECCCCCCcccceEEEEeCCCCcEEeC------CCC-------CcccccceEEEE--CCEEEEEeCCCCCccc
Confidence 2267777777754 3577777766532211 100 001111112222 56777777653
Q ss_pred CeEEEEECCcc
Q psy10662 209 GIIKIYVIPIR 219 (221)
Q Consensus 209 g~i~iw~~~~~ 219 (221)
..+.+||+.+.
T Consensus 222 ~~v~~yd~~~~ 232 (301)
T 2vpj_A 222 SSVEAYNIRTD 232 (301)
T ss_dssp CCEEEEETTTT
T ss_pred ceEEEEeCCCC
Confidence 46888888765
No 309
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.53 E-value=0.0084 Score=40.59 Aligned_cols=185 Identities=11% Similarity=0.057 Sum_probs=95.4
Q ss_pred CceEEEEeCCCeEEEEEecCCce-----eeEEEEec--cCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKE-----ALAVFKGH--RKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHI 75 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~-----~~~~~~~~--~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~ 75 (221)
..+|.+...| +++.=....... ....+. . =..+..++|+|++.|.+. .+|.+.-.+..+.....-+ +..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG-~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~-~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIG-KGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWM-GRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEE-SSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHH-HHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccC-ccccccceeEEECCCccEEEE-eCCeEEEECCCCCCccccc-ccc
Confidence 4567777777 655433331110 122222 2 246889999998888888 7887776665442221111 111
Q ss_pred cc--------eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662 76 ND--------KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC 147 (221)
Q Consensus 76 ~~--------v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 147 (221)
.. -.++.|.|+|.+.++ .||.|.-++--+.... . |-. ....+ -..--..+..+.|.|+|.+.++
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~-~--Wl~-~a~~v--g~~gw~~~~~lff~p~G~Lyav 151 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD-N--WIA-RATEV--GSGGWSGFKFLFFHPNGYLYAV 151 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-C--HHH-HSEEE--ECSSGGGEEEEEECTTSCEEEE
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC-c--eec-cccEe--ccCCCCceEEEEECCCceEEEE
Confidence 22 378899999998777 5588876654221110 0 000 00000 0011146788999999988777
Q ss_pred ecCCCeEEEEEcCCCCceeeeeeeccccccccccccc-ccccceeEEEEcCCCcEEEEecCCCeEE
Q psy10662 148 GSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNED-DTNEFVSAVCWRQLSRVLVAANSQGIIK 212 (221)
Q Consensus 148 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 212 (221)
. |+.++-....+.... ..+.....+. ......+-+.|.+++.+.++. +|.+.
T Consensus 152 ~--dg~lyr~~~P~~~~~---------~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 152 H--GQQFYKALPPVSNQD---------NWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp E--TTEEEEECCCSSTTC---------CHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred e--CCcEEecCCCCCCCc---------ccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEE
Confidence 7 776543221111100 0000000000 112233457799999877776 77443
No 310
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.47 E-value=0.0069 Score=51.99 Aligned_cols=198 Identities=11% Similarity=0.174 Sum_probs=110.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCC-Cccceeeecc----c
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINK-PNCLRSFVGH----I 75 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~-~~~~~~~~~~----~ 75 (221)
|..+.+|.-. ..++.|||++ ++..++.+.- ..+|.-=.|-+...|+..+ +..|.-|++.. ..+.+.+..| .
T Consensus 75 P~~~iiALra-g~~lQiFnl~-~k~klks~~~-~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~ 150 (1630)
T 1xi4_A 75 PASKVIALKA-GKTLQIFNIE-MKSKMKAHTM-TDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAG 150 (1630)
T ss_pred CCcceEEEec-CCeEEEeehH-Hhhhhccccc-CCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhccc
Confidence 4455666653 6789999998 6666666653 4466666676656655443 46799999964 3455555444 3
Q ss_pred cceeEEEEeCCCCEEEEec-------CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe--cC-CCEE
Q psy10662 76 NDKNFVGLATDGDYVACGS-------ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA--TD-GDYV 145 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~~~l 145 (221)
..|..-..+++.+.++..| -.|.+.+|..+.+.. +.+.||......+... +. .+++
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s--------------Q~iegha~~F~~~~~~~~~~~~~l~ 216 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS--------------QPIEGHAASFAQFKMEGNAEESTLF 216 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc--------------hhhhHhHhhhheeccCCCCCCceEE
Confidence 4566667778888655332 246677776654322 1233444333222221 11 1122
Q ss_pred EEec---CCCeEEEEEcCCC-CceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 146 ACGS---ENNSLYIYYKGLS-KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 146 ~~~~---~d~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
+-+. ..+.+.+-++... .....+. .+......+.........++..++....++.-+.-|.|+++|+.|+.
T Consensus 217 ~f~~~~~~g~kLhi~Ei~~~~~~~~~f~----kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFP----KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred EEEEecCCCceEEEEecCCCccCCCCCc----cccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccch
Confidence 2111 1367888887543 1111111 00000011111223334578888888888888999999999999986
No 311
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.0029 Score=45.96 Aligned_cols=110 Identities=12% Similarity=0.031 Sum_probs=71.8
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEec-cCceEEEEEe--c-CCcEEEe--cCCCcEEEEEcCCCccceeeecccc
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGH-RKAVSYVKFL--N-KEDIVSA--STDSQLKLWNINKPNCLRSFVGHIN 76 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~~--~-~~~l~s~--~~d~~v~~wd~~~~~~~~~~~~~~~ 76 (221)
+.+++.++.||.|.-+|.. +++....++.. ..++....-. + ++.++.+ ..||.|..++..++.....+... .
T Consensus 10 ~~~V~v~t~dG~l~Ald~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~-~ 87 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRR-NGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR-Q 87 (339)
T ss_dssp EEEEEEEETTSCEEEEETT-TTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH-H
T ss_pred CCEEEEEeCCCeEEEEECC-CCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc-c
Confidence 4578899999999999987 78888887754 1233322111 1 2234433 58999999998887544333211 1
Q ss_pred cee--EEEEe-----------CCCCEEEEecCCCeEEEEECCCCeeeEEEE
Q psy10662 77 DKN--FVGLA-----------TDGDYVACGSENNSLYIYYKGLSKHMHAYR 114 (221)
Q Consensus 77 ~v~--~~~~~-----------~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 114 (221)
.+. -+... ..+..+++|+.+|.+...|+++++.+..+.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 110 01111 145678999999999999999999998763
No 312
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.44 E-value=0.028 Score=44.59 Aligned_cols=182 Identities=5% Similarity=-0.108 Sum_probs=101.9
Q ss_pred EEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEec-CCc-EEEecCCCcEEEEEcCCCccceeeeccccceeEEEE
Q psy10662 6 LAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLN-KED-IVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGL 83 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~ 83 (221)
+.+-..++.|..++++ .......+.........|++.+ ++. +++-...+.|.+.++........+...-.....+++
T Consensus 52 ywtD~~~~~I~r~~~~-g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iav 130 (628)
T 4a0p_A 52 YWTDISLKTISRAFMN-GSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALAL 130 (628)
T ss_dssp EEEETTTTEEEEEETT-SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEE
T ss_pred EEEECCCCeEEEEECC-CCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEE
Confidence 3343445666666665 2222222222223567888874 444 456566788999998654322222223345689999
Q ss_pred eCCCCEEEEec--CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEe-cCCCeEEEEEcC
Q psy10662 84 ATDGDYVACGS--ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACG-SENNSLYIYYKG 160 (221)
Q Consensus 84 ~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~ 160 (221)
.|...+|+... ..+.|...++...... . +...-.....++++++++.|..+ ...+.|..+|+.
T Consensus 131 dp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~-------------l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 131 DPAEGFMYWTEWGGKPKIDRAAMDGSERT-T-------------LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCSCE-E-------------EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccCCCeEEEeCCCCCCEEEEEeCCCCceE-E-------------EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 98655544433 3567777776543321 1 11223467889999976655555 456789999886
Q ss_pred CCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 161 LSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
.... ..+. .......++++.. +.++++-...+.|...|..++
T Consensus 197 G~~~-~v~~---------------~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 197 GLNR-EVIA---------------DDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp SCSC-EEEE---------------ECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred CCce-EEee---------------ccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 5433 1111 0111234677654 455555556788888886554
No 313
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.44 E-value=0.018 Score=42.17 Aligned_cols=108 Identities=10% Similarity=0.062 Sum_probs=61.9
Q ss_pred ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcc--ceeee---ccccceeEEEEeCC---CCEE-EEecCC-----Ce
Q psy10662 33 HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNC--LRSFV---GHINDKNFVGLATD---GDYV-ACGSEN-----NS 98 (221)
Q Consensus 33 ~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l-~~~~~d-----~~ 98 (221)
.-.....++|.|++.++.+..+|.|.+++ .++. +..+. ........++++|+ +..| ++-... +.
T Consensus 29 ~l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CCSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 34457899999988888888889999998 3331 11111 12345789999998 4444 433322 56
Q ss_pred EEEEECCCCeeeEEEEeecccceeEeeEE---EeeCceEEEEEecCCCEEEEec
Q psy10662 99 LYIYYKGLSKHMHAYRFDTVRSMLESSFV---GHINDKNFVGLATDGDYVACGS 149 (221)
Q Consensus 99 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~ 149 (221)
|..++....+. ... ......+. ........++|.|+|.+.++-+
T Consensus 107 v~r~~~~~~~~-~~~------~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERG-VLD------RVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCE-EEE------EEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCc-Cce------EEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 77777654321 000 00111111 1112345799999998776644
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.35 E-value=0.02 Score=40.75 Aligned_cols=185 Identities=10% Similarity=0.096 Sum_probs=87.1
Q ss_pred CceEEEEeCC----CeEEEEEecCCceeeEEEEeccCc--eEEEEEecCCcEEEecCC-----CcEEEEEcCCCcccee-
Q psy10662 3 SCHLAFGSAD----HCVHYYDLRNTKEALAVFKGHRKA--VSYVKFLNKEDIVSASTD-----SQLKLWNINKPNCLRS- 70 (221)
Q Consensus 3 ~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~l~s~~~d-----~~v~~wd~~~~~~~~~- 70 (221)
+.+++.|+.+ ..+..||+. +.+ -..+.....+ -.+++...+..++.|+.+ ..+.+||..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~-~~~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFK-EER-WHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETT-TTE-EEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCc-CCc-EeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4566677654 357888887 332 1222111111 112233345556666654 3578888876543221
Q ss_pred -eeccccceeEEEEeCCCCEEEEecCCC-----eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCE
Q psy10662 71 -FVGHINDKNFVGLATDGDYVACGSENN-----SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDY 144 (221)
Q Consensus 71 -~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 144 (221)
+...... .+++. -++..++.|+.++ .+.+||+.+.+....- .+....... +++. -++++
T Consensus 94 ~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-----------~~p~~r~~~-~~~~-~~~~i 158 (302)
T 2xn4_A 94 NMRDRRST-LGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA-----------PMNTRRSSV-GVGV-VGGLL 158 (302)
T ss_dssp CCSSCCBS-CEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC-----------CCSSCCBSC-EEEE-ETTEE
T ss_pred CCCccccc-eEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC-----------CCCCcccCc-eEEE-ECCEE
Confidence 1111111 12222 2566667776543 4777887766543221 011101111 1111 25667
Q ss_pred EEEecCC-------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----CeEE
Q psy10662 145 VACGSEN-------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-----GIIK 212 (221)
Q Consensus 145 l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~ 212 (221)
++.|+.+ ..+.+||..+.+-... .... .....| ..+.+ ++++++.|+.+ ..+.
T Consensus 159 yv~GG~~~~~~~~~~~~~~yd~~~~~W~~~------~~~p---~~r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~~ 223 (302)
T 2xn4_A 159 YAVGGYDVASRQCLSTVECYNATTNEWTYI------AEMS---TRRSGA----GVGVL--NNLLYAVGGHDGPLVRKSVE 223 (302)
T ss_dssp EEECCEETTTTEECCCEEEEETTTTEEEEE------CCCS---SCCBSC----EEEEE--TTEEEEECCBSSSSBCCCEE
T ss_pred EEEeCCCCCCCccccEEEEEeCCCCcEEEC------CCCc---cccccc----cEEEE--CCEEEEECCCCCCcccceEE
Confidence 7777643 3477777765532211 1100 011111 12222 57777777654 3688
Q ss_pred EEECCcc
Q psy10662 213 IYVIPIR 219 (221)
Q Consensus 213 iw~~~~~ 219 (221)
+||+.+.
T Consensus 224 ~yd~~~~ 230 (302)
T 2xn4_A 224 VYDPTTN 230 (302)
T ss_dssp EEETTTT
T ss_pred EEeCCCC
Confidence 8888764
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.26 E-value=0.015 Score=41.71 Aligned_cols=105 Identities=10% Similarity=-0.011 Sum_probs=52.0
Q ss_pred cCCcEEEecCC--------CcEEEEEcCCCccce--eeeccccceeEEEEeCCCCEEEEecC-C-----CeEEEEECCCC
Q psy10662 44 NKEDIVSASTD--------SQLKLWNINKPNCLR--SFVGHINDKNFVGLATDGDYVACGSE-N-----NSLYIYYKGLS 107 (221)
Q Consensus 44 ~~~~l~s~~~d--------~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~v~iwd~~~~ 107 (221)
.+..++.|+.+ ..+.+||..+.+-.. .+...... .+++. .++++++.|+. + ..+.+||+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 44455666632 458889987754321 11111111 12222 35666677765 2 46888888876
Q ss_pred eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC-----eEEEEEcCCCC
Q psy10662 108 KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN-----SLYIYYKGLSK 163 (221)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~ 163 (221)
+.... .. +......-..+ .-++++++.|+.++ .+.+||..+.+
T Consensus 176 ~W~~~------~~-----~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 176 EWKEL------AP-----MQTARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEEC------CC-----CSSCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred eEEEC------CC-----CCCchhceEEE--EECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 54321 00 11001111112 22667777777654 46777776553
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.26 E-value=0.026 Score=40.28 Aligned_cols=146 Identities=12% Similarity=0.071 Sum_probs=71.3
Q ss_pred cCCcEEEecCC-----CcEEEEEcCCCccce--eeeccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeE
Q psy10662 44 NKEDIVSASTD-----SQLKLWNINKPNCLR--SFVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMH 111 (221)
Q Consensus 44 ~~~~l~s~~~d-----~~v~~wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~ 111 (221)
.+..++.|+.+ ..+.+||+.+.+-.. .+......-..+.+ ++.+++.|+.+ ..+.+||+.+.+...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 44455566543 457888887654322 11111111122222 56667777654 458888887765432
Q ss_pred EEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCC-----CeEEEEEcCCCCceeeeeeeccccccccccccccc
Q psy10662 112 AYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDT 186 (221)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (221)
. .. +.........+.+ ++++++.|+.+ ..+.+||+.+.+-.. ... ....
T Consensus 199 ~------~~-----~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~------~~~-------~p~~ 252 (308)
T 1zgk_A 199 I------TA-----MNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF------VAP-------MKHR 252 (308)
T ss_dssp C------CC-----CSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE------CCC-------CSSC
T ss_pred C------CC-----CCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE------CCC-------CCCC
Confidence 1 00 1111111112222 66777778764 457788876653221 111 0011
Q ss_pred ccceeEEEEcCCCcEEEEecCC-----CeEEEEECCcc
Q psy10662 187 NEFVSAVCWRQLSRVLVAANSQ-----GIIKIYVIPIR 219 (221)
Q Consensus 187 ~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~ 219 (221)
......+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 253 r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 253 RSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 111112222 67777777643 45788888765
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.20 E-value=0.036 Score=40.66 Aligned_cols=115 Identities=12% Similarity=0.004 Sum_probs=64.1
Q ss_pred EEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCc-cceeee---ccccceeEEEEeCC----CCEEEEecC---C-
Q psy10662 29 VFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPN-CLRSFV---GHINDKNFVGLATD----GDYVACGSE---N- 96 (221)
Q Consensus 29 ~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~-~~~~~~---~~~~~v~~~~~~~~----~~~l~~~~~---d- 96 (221)
.+...-.....|+|.|++.|+.+..+|.|+++|. +++ .+..+. ........++++|+ +.++++-+. +
T Consensus 23 ~va~~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 23 EVASDLEVPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp EEECSCSCEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred EEeCCCCCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 3333345678999999888888888899999973 444 221111 12345789999997 444343332 3
Q ss_pred ---CeEEEEECCCCe-eeEEEEeecccceeEeeEEE-eeCceEEEEEecCCCEEEEecC
Q psy10662 97 ---NSLYIYYKGLSK-HMHAYRFDTVRSMLESSFVG-HINDKNFVGLATDGDYVACGSE 150 (221)
Q Consensus 97 ---~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 150 (221)
+.|..|+..... .+... ......+.. .......++|.|+|.+.++-+.
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~------~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEV------KTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEE------EEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred CcceEEEEEEECCCCcCcCcc------EEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 456667655331 00000 001111111 1123457999999987776543
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.17 E-value=0.033 Score=39.69 Aligned_cols=104 Identities=9% Similarity=0.149 Sum_probs=52.8
Q ss_pred CceEEEEeCC--CeEEEEEecCCc-eeeEEEEeccCceEEEEEecCCcEEEecCC----CcEEEEEcCCCcccee--eec
Q psy10662 3 SCHLAFGSAD--HCVHYYDLRNTK-EALAVFKGHRKAVSYVKFLNKEDIVSASTD----SQLKLWNINKPNCLRS--FVG 73 (221)
Q Consensus 3 ~~~l~~~~~d--g~i~i~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d----~~v~~wd~~~~~~~~~--~~~ 73 (221)
+.+++.|+.+ ..+.+||..+.. ..+..+...... .+++...+..++.|+.+ ..+.+||..+.+-... +..
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRD-AACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBS-CEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccce-eEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 3456666653 578888887321 111111111111 12222344556666654 5688899877643221 111
Q ss_pred cccceeEEEEeCCCCEEEEecCC------CeEEEEECCCCee
Q psy10662 74 HINDKNFVGLATDGDYVACGSEN------NSLYIYYKGLSKH 109 (221)
Q Consensus 74 ~~~~v~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~ 109 (221)
.......+. -++.+++.|+.+ ..+.+||..+.+.
T Consensus 91 ~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 91 PRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp CCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred cccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 111112222 256677777654 4588889887754
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.14 E-value=0.036 Score=39.55 Aligned_cols=186 Identities=13% Similarity=0.045 Sum_probs=87.5
Q ss_pred CCceEEEEeCC----CeEEEEEecCCceeeEEEEeccC--ceEEEEEecCCcEEEecC----C-----CcEEEEEcCCCc
Q psy10662 2 NSCHLAFGSAD----HCVHYYDLRNTKEALAVFKGHRK--AVSYVKFLNKEDIVSAST----D-----SQLKLWNINKPN 66 (221)
Q Consensus 2 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~l~s~~~----d-----~~v~~wd~~~~~ 66 (221)
++.+++.|+.+ ..+.+||.. +.+ -..+..-.. .-.+++...+..++.|+. + ..+.+||..+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~-~~~-W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPS-NGT-WLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETT-TTE-EEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCC-CCe-EeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 34566677642 367888876 332 111111110 111223334455666665 2 468888987654
Q ss_pred cce--eeeccccceeEEEEeCCCCEEEEecCC-----CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe
Q psy10662 67 CLR--SFVGHINDKNFVGLATDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA 139 (221)
Q Consensus 67 ~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 139 (221)
-.. .+.........+.+ ++++++.|+.+ ..+.+||+.+.+....- .+......-..+.+
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-----------~~p~~r~~~~~~~~- 167 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA-----------PMLTRRIGVGVAVL- 167 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECC-----------CCSSCCBSCEEEEE-
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECC-----------CCCccccceEEEEE-
Confidence 322 11111111122222 56666776643 35778888776543210 01111111112222
Q ss_pred cCCCEEEEecCC-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCC-----C
Q psy10662 140 TDGDYVACGSEN-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQ-----G 209 (221)
Q Consensus 140 ~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g 209 (221)
++++++.|+.+ ..+.+||..+.+-... ... .........+.+ ++++++.|+.+ .
T Consensus 168 -~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~------~~~-------p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 231 (308)
T 1zgk_A 168 -NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI------TAM-------NTIRSGAGVCVL--HNCIYAAGGYDGQDQLN 231 (308)
T ss_dssp -TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC------CCC-------SSCCBSCEEEEE--TTEEEEECCBCSSSBCC
T ss_pred -CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC------CCC-------CCccccceEEEE--CCEEEEEeCCCCCCccc
Confidence 56777777754 3477777765432111 110 011111122222 67777777654 4
Q ss_pred eEEEEECCcc
Q psy10662 210 IIKIYVIPIR 219 (221)
Q Consensus 210 ~i~iw~~~~~ 219 (221)
.+.+||+.+.
T Consensus 232 ~v~~yd~~~~ 241 (308)
T 1zgk_A 232 SVERYDVETE 241 (308)
T ss_dssp CEEEEETTTT
T ss_pred eEEEEeCCCC
Confidence 6888888764
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.07 E-value=0.046 Score=39.53 Aligned_cols=147 Identities=11% Similarity=0.070 Sum_probs=78.8
Q ss_pred CceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee-eccccceeEEEEeCCCCEEEEecCCCeEEEEEC--CCCeeeE
Q psy10662 35 KAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF-VGHINDKNFVGLATDGDYVACGSENNSLYIYYK--GLSKHMH 111 (221)
Q Consensus 35 ~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~--~~~~~~~ 111 (221)
+.+..+.+.+++.++.++.++.|.. ....++.-... ......+..+.+.|++.+++.+...+..+-.|- .+-+.+
T Consensus 122 ~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~- 199 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH- 199 (327)
T ss_dssp SCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE-
T ss_pred CCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC-
Confidence 4567787776556555555665432 11223222222 234456888999998888777655443443442 122211
Q ss_pred EEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccc-cccccce
Q psy10662 112 AYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNE-DDTNEFV 190 (221)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v 190 (221)
.......+..+.+.+++++++ .+.+|.+++.+...++. +.. .... ......+
T Consensus 200 --------------~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~t-----W~~-------~~~~~~~~~~~~ 252 (327)
T 2xbg_A 200 --------------NRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSEN-----WGE-------LLSPLRRNSVGF 252 (327)
T ss_dssp --------------ECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEE-----ECC-------CBCTTSSCCSCE
T ss_pred --------------CCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCe-----eEe-------ccCCcccCCcce
Confidence 012234677888889887665 44577776653221111 110 0000 0122347
Q ss_pred eEEEEcCCCcEEEEecCCCeE
Q psy10662 191 SAVCWRQLSRVLVAANSQGII 211 (221)
Q Consensus 191 ~~~~~~~~~~~l~~~~~dg~i 211 (221)
.++.+.+++.+++++. +|.|
T Consensus 253 ~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 253 LDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp EEEEESSSSCEEEEES-TTCE
T ss_pred EEEEecCCCEEEEEeC-CCeE
Confidence 8888998887777664 5655
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.05 E-value=0.049 Score=39.70 Aligned_cols=95 Identities=9% Similarity=0.096 Sum_probs=42.7
Q ss_pred CCceEEEEeCC-CeEEEEEecCCceeeEEEEecc---CceEEEEEecCCcEEEecC-C---------CcEEEEEcCCCcc
Q psy10662 2 NSCHLAFGSAD-HCVHYYDLRNTKEALAVFKGHR---KAVSYVKFLNKEDIVSAST-D---------SQLKLWNINKPNC 67 (221)
Q Consensus 2 ~~~~l~~~~~d-g~i~i~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~l~s~~~-d---------~~v~~wd~~~~~~ 67 (221)
++.+++.|+.+ ..+.+||+......-..+..-. ..-.+++...+..++.|+. + ..+.+||..+.+-
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 34555666543 4678888752111111111111 1112233334555666665 2 4688899877543
Q ss_pred ceeeecc-ccceeEEEEeCCCCEEEEecCC
Q psy10662 68 LRSFVGH-INDKNFVGLATDGDYVACGSEN 96 (221)
Q Consensus 68 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d 96 (221)
...-... .......+...++++++.|+.+
T Consensus 99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred EECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 2211101 1111111122466777777754
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.02 E-value=0.036 Score=37.57 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=64.0
Q ss_pred cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEe--eCceEEEEEecCCCEEEEecCCCe
Q psy10662 76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGH--INDKNFVGLATDGDYVACGSENNS 153 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~ 153 (221)
..+..++|+|+|.+.++ .+|.+.-.+..+.+... |- .. .+..+. -..-..+.|.|+|.+.++ .||.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~---W~---~s--~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~ 108 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDN---WM---GR--AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDK 108 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC---HH---HH--CEEEECSCGGGCSEEEECTTSCEEEE--ETTE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccc---cc---cc--ccEecccccccceEEEECCCCCEEEe--CCCE
Confidence 36789999999987666 67766555543311100 00 00 000010 011367889999988887 5698
Q ss_pred EEEEEcCCCCceeeeeeecccccccccccc-cccccceeEEEEcCCCcEEEEecCCCeEEEEECC
Q psy10662 154 LYIYYKGLSKHMHAYRFDTVRSMLERDRNE-DDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIP 217 (221)
Q Consensus 154 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 217 (221)
|+-++-.+..... .+..-... ..--..+..+.|.|+|.+.+.. |+.++-+..+
T Consensus 109 iyr~~pP~~~~~~---------Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P 162 (236)
T 1tl2_A 109 LYKASPPQSDTDN---------WIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPP 162 (236)
T ss_dssp EEEESCCCSTTCC---------HHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCC
T ss_pred EEEeCCCcCCCCc---------eeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCC
Confidence 8877643221110 00000000 0011356889999999877776 7776544333
No 323
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.94 E-value=0.066 Score=39.19 Aligned_cols=92 Identities=7% Similarity=0.019 Sum_probs=52.3
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceeeEEEE---eccCceEEEEEecC----CcEEEecC-C-----CcEEEEEcCCCc-
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEALAVFK---GHRKAVSYVKFLNK----EDIVSAST-D-----SQLKLWNINKPN- 66 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~---~~~~~i~~~~~~~~----~~l~s~~~-d-----~~v~~wd~~~~~- 66 (221)
|||+++++ ..+|.|++++ ....+.+..+. ........|+++|+ +.|+.+.. . +.|..++.....
T Consensus 40 pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~ 117 (352)
T 2ism_A 40 PDGGMLIA-ERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERG 117 (352)
T ss_dssp TTSCEEEE-ETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCE
T ss_pred CCCeEEEE-eCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCc
Confidence 57775544 5679999888 31222222211 12346889999986 55554433 2 667788876431
Q ss_pred ----cce-eee---ccccceeEEEEeCCCCEEEEec
Q psy10662 67 ----CLR-SFV---GHINDKNFVGLATDGDYVACGS 94 (221)
Q Consensus 67 ----~~~-~~~---~~~~~v~~~~~~~~~~~l~~~~ 94 (221)
.+. .+. ........++|.|+|.++++.+
T Consensus 118 ~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 118 VLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 111 122 1112346899999998766654
No 324
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.87 E-value=0.068 Score=38.95 Aligned_cols=25 Identities=4% Similarity=-0.016 Sum_probs=15.4
Q ss_pred CCCcEEEEecCCC------eEEEEECCcccC
Q psy10662 197 QLSRVLVAANSQG------IIKIYVIPIRVL 221 (221)
Q Consensus 197 ~~~~~l~~~~~dg------~i~iw~~~~~~l 221 (221)
.++++++.|+.++ .+.+++++++++
T Consensus 315 ~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 315 WNNSLLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp ETTEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 3677878777532 456668877653
No 325
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.75 E-value=0.22 Score=42.54 Aligned_cols=175 Identities=13% Similarity=0.065 Sum_probs=98.9
Q ss_pred CeEEEEEecCCceeeEEEEec-cCceEEEEE---ec--CCcEEEec----------CCCcEEEEEcCCCccceee-eccc
Q psy10662 13 HCVHYYDLRNTKEALAVFKGH-RKAVSYVKF---LN--KEDIVSAS----------TDSQLKLWNINKPNCLRSF-VGHI 75 (221)
Q Consensus 13 g~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~---~~--~~~l~s~~----------~d~~v~~wd~~~~~~~~~~-~~~~ 75 (221)
+.|++.|.. +.+.+..+.-. ...+.+++. .. ..+++.|. ..|.|.+|++...+..... ...+
T Consensus 807 s~i~lidp~-t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~ 885 (1158)
T 3ei3_A 807 HNLLIIDQH-TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK 885 (1158)
T ss_dssp EEEEEEETT-TCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEES
T ss_pred EEEEEEeCC-CCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcC
Confidence 467888876 55555554422 233555553 22 34566654 3578999998744322211 2346
Q ss_pred cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662 76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY 155 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 155 (221)
+++++++-- +| +++++- ...|++|++...+.+. . + ..+-..+..+.....++++++|..-..|.
T Consensus 886 g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~-~--~----------~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~ 949 (1158)
T 3ei3_A 886 GAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELR-T--E----------CNHYNNIMALYLKTKGDFILVGDLMRSVL 949 (1158)
T ss_dssp SCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEE-E--E----------EEECCCSCEEEEEEETTEEEEEESSBCEE
T ss_pred CcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEE-E--E----------eeccccEEEEEEeccCCEEEEEEhhheEE
Confidence 778887654 34 444443 4679999987655433 1 0 01111132333334577899998887777
Q ss_pred EEEcCCCCc-eeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCc
Q psy10662 156 IYYKGLSKH-MHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 156 ~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
++..+.... +..+. .+....+++++.|-.++ .++.+..+|.|.+...+.
T Consensus 950 ~~~y~~~~~~L~~~a-------------~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 950 LLAYKPMEGNFEEIA-------------RDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEETTTTEEEEEE-------------ECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred EEEEEcCCCeEEEEE-------------eecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 765432211 11111 11245578888886554 667788899999988764
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.74 E-value=0.098 Score=38.30 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=35.2
Q ss_pred cCceEEEEEecCCc-EEEecCCCcEEEEEcCCCcc---ceee----eccccceeEEEEeCC
Q psy10662 34 RKAVSYVKFLNKED-IVSASTDSQLKLWNINKPNC---LRSF----VGHINDKNFVGLATD 86 (221)
Q Consensus 34 ~~~i~~~~~~~~~~-l~s~~~d~~v~~wd~~~~~~---~~~~----~~~~~~v~~~~~~~~ 86 (221)
-.....|+|.|++. ++.+...|.|++++.. ++. +..+ .........++++|+
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence 34578999999877 8888888999999853 321 1111 112345688999995
No 327
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.57 E-value=0.12 Score=37.05 Aligned_cols=64 Identities=14% Similarity=0.150 Sum_probs=33.6
Q ss_pred cCCcEEEecCC-------CcEEEEEcCCCcccee--eeccccceeEEEEeCCCCEEEEecC------CCeEEEEECCCCe
Q psy10662 44 NKEDIVSASTD-------SQLKLWNINKPNCLRS--FVGHINDKNFVGLATDGDYVACGSE------NNSLYIYYKGLSK 108 (221)
Q Consensus 44 ~~~~l~s~~~d-------~~v~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~ 108 (221)
.+..++.|+.+ ..+.+||..+.+-... +...... .++.. .++.+++.|+. -..+.+||+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 44556666653 2477888876543221 1111111 12222 35666666664 2358889988765
Q ss_pred e
Q psy10662 109 H 109 (221)
Q Consensus 109 ~ 109 (221)
.
T Consensus 187 W 187 (318)
T 2woz_A 187 W 187 (318)
T ss_dssp E
T ss_pred E
Confidence 4
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.57 E-value=0.3 Score=41.78 Aligned_cols=142 Identities=16% Similarity=0.152 Sum_probs=83.0
Q ss_pred ceEEEEe----------CCCeEEEEEecCCceeeEE-EEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeee
Q psy10662 4 CHLAFGS----------ADHCVHYYDLRNTKEALAV-FKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFV 72 (221)
Q Consensus 4 ~~l~~~~----------~dg~i~i~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~ 72 (221)
.+|++|. ..|.|++|++. .++.... -...+++|++++--.+ +|++| ....+++|++...+.++.-.
T Consensus 845 ~~lvVGTa~~~~~e~~~~~Gri~vf~v~-~~kL~lv~~~~v~g~v~al~~~~g-~Lla~-ig~~l~vy~l~~~~~L~~~~ 921 (1158)
T 3ei3_A 845 TYFIVGTAMVYPEEAEPKQGRIVVFQYS-DGKLQTVAEKEVKGAVYSMVEFNG-KLLAS-INSTVRLYEWTTEKELRTEC 921 (1158)
T ss_dssp CEEEEEEEECCTTCSSCCCEEEEEEEEE-TTEEEEEEEEEESSCEEEEEEETT-EEEEE-ETTEEEEEEECTTSCEEEEE
T ss_pred EEEEEEeeecCCCCCCCCceEEEEEEEE-CCEEEEEEEEEcCCcCEEEeeeCC-EEEEE-cCCEEEEEECCCCceEEEEe
Confidence 5677765 35889999997 3332221 1235788999885544 54443 35889999997665444111
Q ss_pred ccccceeEEEEeCCCCEEEEecCCCeEEEEE--CCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecC
Q psy10662 73 GHINDKNFVGLATDGDYVACGSENNSLYIYY--KGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSE 150 (221)
Q Consensus 73 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 150 (221)
.+-..+..+.....+++++.|.--..|.++. ....+.. .+ .-......++++.+-.++ .++.+..
T Consensus 922 ~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~-~~-----------a~D~~~~~vta~~~ld~~-t~l~aD~ 988 (1158)
T 3ei3_A 922 NHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFE-EI-----------ARDFNPNWMSAVEILDDD-NFLGAEN 988 (1158)
T ss_dssp EECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEE-EE-----------EECCSCBCEEEEEEEETT-EEEEEET
T ss_pred eccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEE-EE-----------EeecccccEEEEEEEccC-cEEEEcC
Confidence 1111233333333467888887666666543 2222211 11 112234567788876554 6777999
Q ss_pred CCeEEEEEcCC
Q psy10662 151 NNSLYIYYKGL 161 (221)
Q Consensus 151 d~~i~~~d~~~ 161 (221)
+|.+.+.....
T Consensus 989 ~gNl~vl~~~~ 999 (1158)
T 3ei3_A 989 AFNLFVCQKDS 999 (1158)
T ss_dssp TSEEEEEEECT
T ss_pred CCcEEEEecCC
Confidence 99999987654
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.33 E-value=0.17 Score=36.21 Aligned_cols=143 Identities=13% Similarity=0.101 Sum_probs=65.6
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEEEe-ccCceEEEEEecCCcEEEecC----CC-------cEEEEEcCCCccce--
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVFKG-HRKAVSYVKFLNKEDIVSAST----DS-------QLKLWNINKPNCLR-- 69 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~s~~~----d~-------~v~~wd~~~~~~~~-- 69 (221)
.+++.|+. .+..||..+..-....+.. ....-.+++...+..++.|+. ++ .+.+||..+.+-..
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 34555553 4788998733211111111 111123333334555667763 12 16778887654322
Q ss_pred eeeccccceeEEEEeCCCCEEEEecCC-------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662 70 SFVGHINDKNFVGLATDGDYVACGSEN-------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG 142 (221)
Q Consensus 70 ~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 142 (221)
.+...... .+++.. ++.+++.|+.+ ..+.+||+.+.+....- ..+ ....+| +++ ..++
T Consensus 95 ~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~------~~p-~~r~~~-----~~~-~~~~ 159 (318)
T 2woz_A 95 PLPSARCL-FGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK------NLP-IKVYGH-----NVI-SHNG 159 (318)
T ss_dssp CBSSCBCS-CEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC------CCS-SCEESC-----EEE-EETT
T ss_pred CCCccccc-cceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC------CCC-Cccccc-----EEE-EECC
Confidence 11111111 122222 55666666643 34778888776543221 000 000111 111 2466
Q ss_pred CEEEEecCC------CeEEEEEcCCCC
Q psy10662 143 DYVACGSEN------NSLYIYYKGLSK 163 (221)
Q Consensus 143 ~~l~~~~~d------~~i~~~d~~~~~ 163 (221)
++++.|+.+ ..+.+||..+.+
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 777777642 357788877654
No 330
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.31 E-value=0.19 Score=36.65 Aligned_cols=120 Identities=11% Similarity=-0.013 Sum_probs=64.6
Q ss_pred EEEEeccCceEEEEEecCCcEEEecC-CCcEEEEEcCCCccc--eee----eccccceeEEEEeCC----CCEEEEe--c
Q psy10662 28 AVFKGHRKAVSYVKFLNKEDIVSAST-DSQLKLWNINKPNCL--RSF----VGHINDKNFVGLATD----GDYVACG--S 94 (221)
Q Consensus 28 ~~~~~~~~~i~~~~~~~~~~l~s~~~-d~~v~~wd~~~~~~~--~~~----~~~~~~v~~~~~~~~----~~~l~~~--~ 94 (221)
..+...-...+.|+|.|++.++.+.. .|.|++++...++.. ..+ .........++++|+ +.+.++- .
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 34444456688999999877777766 899999986554431 111 122446789999995 4333332 2
Q ss_pred CCCeEEEEECCCCeeeEEEEeecccc-eeEeeEE-EeeCceEEEEEecCCCEEEEecC
Q psy10662 95 ENNSLYIYYKGLSKHMHAYRFDTVRS-MLESSFV-GHINDKNFVGLATDGDYVACGSE 150 (221)
Q Consensus 95 ~d~~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 150 (221)
.++.|.-|.+........ ..... .+...+. ........++|.|+|.+.++.+.
T Consensus 105 ~~~~v~R~~~~~~~~~~~---~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGE---QLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp SSEEEEEEEBCTTSCTTC---CBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred CCCEEEEEEeCCCCcccc---cCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 344555555443110000 00000 1111111 11223456999999987777553
No 331
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.23 E-value=0.22 Score=36.47 Aligned_cols=91 Identities=9% Similarity=0.040 Sum_probs=51.4
Q ss_pred CCCceEEEEeCCCeEEEEEecCCce-eeEEEE---eccCceEEEEEecC----CcEEEecC----C----CcEEEEEcCC
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKE-ALAVFK---GHRKAVSYVKFLNK----EDIVSAST----D----SQLKLWNINK 64 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~-~~~~~~---~~~~~i~~~~~~~~----~~l~s~~~----d----~~v~~wd~~~ 64 (221)
|||++++ +..+|.|++++. .++ .+..+. ........|+++|+ +.|+.+.. + ..|..|+...
T Consensus 38 pdG~l~V-~e~~g~I~~~d~--~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~ 114 (354)
T 3a9g_A 38 GGGRYLV-TERPGRLVLISP--SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDG 114 (354)
T ss_dssp ETTEEEE-EETTTEEEEECS--SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECS
T ss_pred CCCeEEE-EeCCCEEEEEeC--CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECC
Confidence 4666444 456799988873 333 222211 12346889999985 56555433 2 5677777654
Q ss_pred C-------ccc-eeeec-cccceeEEEEeCCCCEEEEec
Q psy10662 65 P-------NCL-RSFVG-HINDKNFVGLATDGDYVACGS 94 (221)
Q Consensus 65 ~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~ 94 (221)
. +.+ ..+.. .......++|.|+|.++++.+
T Consensus 115 ~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 115 STFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp SSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred CCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 3 111 11211 112346799999998777654
No 332
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.11 E-value=0.24 Score=35.87 Aligned_cols=160 Identities=11% Similarity=0.141 Sum_probs=88.3
Q ss_pred eEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEEEEEecCC-cEE-Eec------CCCcEEEEEcCCCccceeee
Q psy10662 5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSYVKFLNKE-DIV-SAS------TDSQLKLWNINKPNCLRSFV 72 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~-~l~-s~~------~d~~v~~wd~~~~~~~~~~~ 72 (221)
.|+--. +..|+-|+++....+.+.+..|.. .|..-..+++. .++ +|- -.|.+.+|..+.. .-+.+.
T Consensus 119 ~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie 196 (365)
T 2xzh_A 119 TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE 196 (365)
T ss_dssp EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEEC
T ss_pred eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceee
Confidence 344432 457999999865677788876653 34444444433 333 321 2467888987654 334456
Q ss_pred ccccceeEEEEeC--CC-CEEEEecC---CCeEEEEECCCCe-eeEEEEeecccceeEeeEE---EeeCceEEEEEecCC
Q psy10662 73 GHINDKNFVGLAT--DG-DYVACGSE---NNSLYIYYKGLSK-HMHAYRFDTVRSMLESSFV---GHINDKNFVGLATDG 142 (221)
Q Consensus 73 ~~~~~v~~~~~~~--~~-~~l~~~~~---d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~ 142 (221)
+|...-..+.+.. .. .+++-+.. .+.++|-++.... .... ...+...-+. ....-.-++..++.-
T Consensus 197 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~-----f~kk~vdi~fppea~~DFPVamqvs~ky 271 (365)
T 2xzh_A 197 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQP-----FPKKAVDVFFPPEAQNDFPVAMQISEKH 271 (365)
T ss_dssp CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCC-----CCCEEEEECCCTTCTTCCEEEEEEETTT
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCC-----cccccceeeCCccccCCceEEEEecccC
Confidence 6644322222211 11 12222222 2578888874420 0000 0000111111 123345578888888
Q ss_pred CEEEEecCCCeEEEEEcCCCCceeeeeee
Q psy10662 143 DYVACGSENNSLYIYYKGLSKHMHAYRFD 171 (221)
Q Consensus 143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 171 (221)
..+..-+.-|.+++||++++.+++.-+..
T Consensus 272 gviyviTK~G~ihlyDleTgt~i~~nrIS 300 (365)
T 2xzh_A 272 DVVFLITKYGYIHLYDLETGTCIYMNRIS 300 (365)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CEEEEEeCCcEEEEEEcccCcEEEEeccC
Confidence 88999999999999999999998776543
No 333
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.08 E-value=0.0088 Score=46.23 Aligned_cols=87 Identities=7% Similarity=-0.016 Sum_probs=53.3
Q ss_pred ccceeEEEEeCCCCEEEEec-CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCe
Q psy10662 75 INDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNS 153 (221)
Q Consensus 75 ~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 153 (221)
......+.++|+|++++.++ .+.++.++|+++......-.............. -.......+|.++|+...+-.-|..
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecce
Confidence 34457889999999876555 578999999874221100000000011111111 2334567899999977777778999
Q ss_pred EEEEEcCCC
Q psy10662 154 LYIYYKGLS 162 (221)
Q Consensus 154 i~~~d~~~~ 162 (221)
|.-|++...
T Consensus 401 vvkWni~~a 409 (638)
T 3sbq_A 401 VVKWNMEEA 409 (638)
T ss_dssp EEEEEHHHH
T ss_pred EEEEeccHH
Confidence 999998643
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.05 E-value=0.33 Score=36.91 Aligned_cols=53 Identities=8% Similarity=-0.100 Sum_probs=35.0
Q ss_pred cCceEEEEEecCCcEEEecCCC-cEEEEEcCCCccc--eeeec------cccceeEEEEeCC
Q psy10662 34 RKAVSYVKFLNKEDIVSASTDS-QLKLWNINKPNCL--RSFVG------HINDKNFVGLATD 86 (221)
Q Consensus 34 ~~~i~~~~~~~~~~l~s~~~d~-~v~~wd~~~~~~~--~~~~~------~~~~v~~~~~~~~ 86 (221)
-...+.|+|.|++.|+.+...+ .|++++..+++.. ..+.. ....+..++|+|+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 4467899999988877777765 6888876544322 12211 2345678999995
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.02 E-value=0.46 Score=38.28 Aligned_cols=200 Identities=7% Similarity=0.041 Sum_probs=96.0
Q ss_pred CCceEEEEeCC----CeEEEEEecCCceeeEEEE-e-------ccCceEEEEEe--cCCcEEEecCC------CcEEEEE
Q psy10662 2 NSCHLAFGSAD----HCVHYYDLRNTKEALAVFK-G-------HRKAVSYVKFL--NKEDIVSASTD------SQLKLWN 61 (221)
Q Consensus 2 ~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~-~-------~~~~i~~~~~~--~~~~l~s~~~d------~~v~~wd 61 (221)
++.+++.|+.+ ..+.+||..+ .+ -..+. . ....-.+++.. .+..++.|+.+ ..+.+||
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~-~~-W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHY-DK-IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECS-SC-EEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred CCEEEEECCCCCCCcCcEEEEECCC-Ce-EEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 45566777643 4678888873 32 11121 0 01111233333 44456666643 3578888
Q ss_pred cCCCccce--eeeccccceeEEEEeCCCCEEEEecCCC--eEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEE
Q psy10662 62 INKPNCLR--SFVGHINDKNFVGLATDGDYVACGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVG 137 (221)
Q Consensus 62 ~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 137 (221)
..+.+-.. .+.. ...-.+++...++.+++.|+.++ .+.+||..+.+....- . .+. .........++.
T Consensus 475 ~~t~~W~~~~~~p~-~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~---~-~g~----~p~~r~~~~a~v 545 (695)
T 2zwa_A 475 MKTREWSMIKSLSH-TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT---P-KDE----FFQNSLVSAGLE 545 (695)
T ss_dssp TTTTEEEECCCCSB-CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC---C-SSG----GGGSCCBSCEEE
T ss_pred CCCCcEEECCCCCC-CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc---C-CCC----CCCcccceeEEE
Confidence 87753322 1211 11112233324777888887654 6889998876543210 0 000 000111122344
Q ss_pred EecC-CCEEEEecC--C-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecC--
Q psy10662 138 LATD-GDYVACGSE--N-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANS-- 207 (221)
Q Consensus 138 ~~~~-~~~l~~~~~--d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-- 207 (221)
+..+ +++++.|+. + ..+..||+.+......+.+...... +.....+| +++...++++++.|+.
T Consensus 546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~-----~~~~~~~~~iyv~GG~~~ 618 (695)
T 2zwa_A 546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH--PLFQRYGS-----QIKYITPRKLLIVGGTSP 618 (695)
T ss_dssp EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC--GGGCCBSC-----EEEEEETTEEEEECCBCS
T ss_pred EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC--CCCCcccc-----eEEEeCCCEEEEECCccC
Confidence 5554 667777775 2 4588888877662011111111110 00111112 2223333777777774
Q ss_pred ------CCeEEEEECCcc
Q psy10662 208 ------QGIIKIYVIPIR 219 (221)
Q Consensus 208 ------dg~i~iw~~~~~ 219 (221)
...+.+||+.+.
T Consensus 619 ~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 619 SGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp SCCCCTTTSEEEEETTTT
T ss_pred CCCCCCCCeEEEEECCCC
Confidence 345888988765
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.00 E-value=0.26 Score=35.21 Aligned_cols=183 Identities=14% Similarity=0.062 Sum_probs=84.7
Q ss_pred eEEEEeCCCeEEEEEecCCceeeEEEEec-cCceEEEEEecCCcEEEecC----C-------CcEEEEEcCCCccce--e
Q psy10662 5 HLAFGSADHCVHYYDLRNTKEALAVFKGH-RKAVSYVKFLNKEDIVSAST----D-------SQLKLWNINKPNCLR--S 70 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~l~s~~~----d-------~~v~~wd~~~~~~~~--~ 70 (221)
+++.|+ ..+.+||..+..-....+... ...-.+++...+..++.|+. + ..+.+||..+.+-.. .
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 455565 578999987332111111111 11122333334555666663 1 127788887654321 1
Q ss_pred eeccccceeEEEEeCCCCEEEEecCC--------CeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCC
Q psy10662 71 FVGHINDKNFVGLATDGDYVACGSEN--------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDG 142 (221)
Q Consensus 71 ~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 142 (221)
+...... .+++.. ++..++.|+.+ ..+.+||..+.+.... .. +......- +++ .-++
T Consensus 85 ~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~------~~-----~p~~r~~~-~~~-~~~~ 149 (315)
T 4asc_A 85 LPSPRCL-FGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES------DP-----LPYVVYGH-TVL-SHMD 149 (315)
T ss_dssp BSSCEES-CEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC------CC-----CSSCCBSC-EEE-EETT
T ss_pred CCcchhc-eeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC------CC-----CCCcccce-eEE-EECC
Confidence 1111111 122222 55666666632 3588888887654221 00 11111111 111 2456
Q ss_pred CEEEEecC-C-----CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC-----eE
Q psy10662 143 DYVACGSE-N-----NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG-----II 211 (221)
Q Consensus 143 ~~l~~~~~-d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i 211 (221)
++++.|+. + ..+.+||..+.+-.. ..... .....| ..+.+ ++++++.|+.++ .+
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~------~~~~p---~~r~~~----~~~~~--~~~iyv~GG~~~~~~~~~~ 214 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKFEWKE------LAPMQ---TARSLF----GATVH--DGRIIVAAGVTDTGLTSSA 214 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTTEEEE------CCCCS---SCCBSC----EEEEE--TTEEEEEEEECSSSEEEEE
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCCeEEE------CCCCC---Cchhce----EEEEE--CCEEEEEeccCCCCccceE
Confidence 67777776 2 357778776553211 11110 011111 12222 667777776543 57
Q ss_pred EEEECCcc
Q psy10662 212 KIYVIPIR 219 (221)
Q Consensus 212 ~iw~~~~~ 219 (221)
.+||+.+.
T Consensus 215 ~~yd~~~~ 222 (315)
T 4asc_A 215 EVYSITDN 222 (315)
T ss_dssp EEEETTTT
T ss_pred EEEECCCC
Confidence 88888764
No 337
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=95.74 E-value=0.62 Score=39.07 Aligned_cols=39 Identities=5% Similarity=-0.080 Sum_probs=33.7
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF 115 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 115 (221)
.+.+++..++..++++-+.|+++++|++.+++++.+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 456777788888999999999999999999999988643
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.081 Score=38.47 Aligned_cols=123 Identities=10% Similarity=0.035 Sum_probs=69.6
Q ss_pred CCcEEEecCCCcEEEEEcCCCccceeeecc-ccceeEEEEe--C-CCCEEEEe-cCCCeEEEEECCCCeeeEEEEeeccc
Q psy10662 45 KEDIVSASTDSQLKLWNINKPNCLRSFVGH-INDKNFVGLA--T-DGDYVACG-SENNSLYIYYKGLSKHMHAYRFDTVR 119 (221)
Q Consensus 45 ~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~ 119 (221)
++.++.++.||.|.-.|..+|+..-.+... ..++....-. + ++..++.. +.||.|..++..++.....+ ....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~--~~~~ 87 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL--SIRQ 87 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE--EHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee--cccc
Confidence 456889999999999999999888777543 1222221100 1 22334443 68999999999887554332 1110
Q ss_pred ceeEeeEEEeeCceE-EEEEecCCCEEEEecCCCeEEEEEcCCCCceeeee
Q psy10662 120 SMLESSFVGHINDKN-FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYR 169 (221)
Q Consensus 120 ~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 169 (221)
......+.....++. ...-...+..+++|+.+|.+...|+.+++.+..+.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 000000111111110 00000134578889999999999999888776664
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.51 E-value=0.57 Score=35.61 Aligned_cols=119 Identities=7% Similarity=0.003 Sum_probs=59.8
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC---CCEEEEecC---
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD---GDYVACGSE--- 150 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~--- 150 (221)
....++|.|+|+++++-...+.|.+++...++......+.. .. ........+..++|+|+ +..|.+...
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~--~~---~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPE--IV---NDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTT--CC---CCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCc--cc---cccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 45799999999977776555578888765443321110000 00 00012345678999995 444443332
Q ss_pred ----------CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662 151 ----------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN 206 (221)
Q Consensus 151 ----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 206 (221)
...|.-|+....... + ......+..+.....| ....++|.|||.+.++.+
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~--~--~~~~~i~~~~p~~~~H--~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDT--L--EKPVDLLAGLPSSKDH--QSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTE--E--EEEEEEEEEECCCSSC--CEEEEEECTTSCEEEEEC
T ss_pred cCCCccccccccEEEEEEECCCCCC--c--CCcEEEEEcCCCCCCC--CCCeEeECCCCeEEEEEC
Confidence 124555554322110 0 0000111111111224 357899999998777754
No 340
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.48 E-value=0.57 Score=35.44 Aligned_cols=159 Identities=11% Similarity=0.151 Sum_probs=89.8
Q ss_pred eEEEEeCCCeEEEEEecCCceeeEEEEeccC----ceEEEEEecCC-cEE-Eec------CCCcEEEEEcCCCccceeee
Q psy10662 5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRK----AVSYVKFLNKE-DIV-SAS------TDSQLKLWNINKPNCLRSFV 72 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~-~l~-s~~------~d~~v~~wd~~~~~~~~~~~ 72 (221)
.|+-- .+..|+-|+++....+.+.+..|.. .|..-..+++. .++ +|- ..|.+.+|..+.. .-+.+.
T Consensus 118 ~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie 195 (494)
T 1bpo_A 118 TVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE 195 (494)
T ss_dssp EEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEEC
T ss_pred eEEEE-cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchhe
Confidence 34444 3558999999755677788876643 34444444433 333 321 2477889987654 334556
Q ss_pred ccccceeEEEEeCCC---CEEEEecC---CCeEEEEECCCCe-eeEEEEeecccceeEeeEE---EeeCceEEEEEecCC
Q psy10662 73 GHINDKNFVGLATDG---DYVACGSE---NNSLYIYYKGLSK-HMHAYRFDTVRSMLESSFV---GHINDKNFVGLATDG 142 (221)
Q Consensus 73 ~~~~~v~~~~~~~~~---~~l~~~~~---d~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~ 142 (221)
+|...-..+.+..+. .+++-+.. .+.++|-++.... ....+ ..+...-+. ....-.-++..++.-
T Consensus 196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f-----~kk~vdv~fppe~~~DFPvamqvs~ky 270 (494)
T 1bpo_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF-----PKKAVDVFFPPEAQNDFPVAMQISEKH 270 (494)
T ss_dssp CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCC-----CCEEEECCCCTTSTTCCEEEEEEETTT
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCc-----cceeeeeeCCcccccCceeEEEecccC
Confidence 665433333322111 12332322 3688888885430 00000 000011011 123345578888888
Q ss_pred CEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662 143 DYVACGSENNSLYIYYKGLSKHMHAYRF 170 (221)
Q Consensus 143 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 170 (221)
..+..-+.-|.+++||+.++.+++.-+.
T Consensus 271 gviyviTK~G~i~lyDleTgt~i~~nrI 298 (494)
T 1bpo_A 271 DVVFLITKYGYIHLYDLETGTCIYMNRI 298 (494)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CEEEEEecCceEEEEecccceeeeeecc
Confidence 8999999999999999999998876654
No 341
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.25 E-value=0.97 Score=36.70 Aligned_cols=182 Identities=14% Similarity=0.114 Sum_probs=97.2
Q ss_pred eEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeee-----cccccee
Q psy10662 5 HLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFV-----GHINDKN 79 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~-----~~~~~v~ 79 (221)
.|-.|..+| +..||.. +.+...........|.++.. .++.|..++.+ -+..+|..+.+.. .+. .....|.
T Consensus 75 ~lWigT~~G-l~~yd~~-~~~f~~~~~~~~~~i~~i~~-~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~ 149 (758)
T 3ott_A 75 YLYMGTDNG-ILVYNYR-ADRYEQPETDFPTDVRTMAL-QGDTLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIY 149 (758)
T ss_dssp EEEEEETTE-EEEEETT-TTEECCCSCCCCSCEEEEEE-ETTEEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEE
T ss_pred cEEEEeCCC-eEEEeCC-CCEEECcccCCCceEEEEEe-cCCcEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEE
Confidence 344555554 6678876 33221100111234666654 45667777666 5788887665432 221 1124577
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEc
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYK 159 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 159 (221)
++...+++.+.+ ++.+| +..+|..+.+... +.... . .......|.++...+++..|..|+. +-+..+|.
T Consensus 150 ~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~-~~~~~--~-----~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~ 218 (758)
T 3ott_A 150 SIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEG-IPLPV--H-----SSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFP 218 (758)
T ss_dssp EEEECTTCCEEE-EETTE-EEEEETTTTEEEE-ECCCC--C-----TTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEET
T ss_pred EEEEcCCCCEEE-EeCCC-HhhCccCCCceEE-ecCCC--c-----cccccceeEEEEEECCCCEEEEEEC-CCCeEEcC
Confidence 887777777555 44444 7778876654321 10000 0 0001224777877777765555654 45778887
Q ss_pred CCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEECCcc
Q psy10662 160 GLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVIPIR 219 (221)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 219 (221)
.+.+...... -....|.++...++|.+.+.. .+| +.+++..++
T Consensus 219 ~~~~~~~~~~---------------l~~~~i~~i~~d~~g~lWigT-~~G-l~~~~~~~~ 261 (758)
T 3ott_A 219 STGQIKQTEA---------------FHNNSIKSLALDGNGDLLAGT-DNG-LYVYHNDTT 261 (758)
T ss_dssp TTTEEEEEEE---------------EEEEEEEEEEECTTCCEEEEE-TTE-EEEECCTTS
T ss_pred CCCeEEeccC---------------CCCCeEEEEEEcCCCCEEEEe-CCc-eeEEecCCC
Confidence 6543221100 012357888888887766554 444 667776543
No 342
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=95.15 E-value=1.2 Score=37.32 Aligned_cols=39 Identities=5% Similarity=-0.080 Sum_probs=33.7
Q ss_pred ceEEEEEecCCCEEEEecCCCeEEEEEcCCCCceeeeee
Q psy10662 132 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF 170 (221)
Q Consensus 132 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 170 (221)
.+.+++..++..++++-+.|+++++|++.+++++...++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 456677778888999999999999999999999887764
No 343
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.89 E-value=0.76 Score=33.57 Aligned_cols=120 Identities=8% Similarity=-0.039 Sum_probs=62.4
Q ss_pred cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC----CCEEEEe--c
Q psy10662 76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD----GDYVACG--S 149 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~--~ 149 (221)
...+.++|.|+|.++++--..|.|++++...++........ ............++++|+ +.+.++- .
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~-------~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVP-------GVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECT-------TCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccC-------ceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 45689999999997777766899999876554431110000 001122445788999985 4333321 2
Q ss_pred CCCeEEEEEcCCCCce-eeeeeecccccccccccccccccceeEEEEcCCCcEEEEec
Q psy10662 150 ENNSLYIYYKGLSKHM-HAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAAN 206 (221)
Q Consensus 150 ~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 206 (221)
.++.|.-|.+...... ..+ ......+..+.....|. -..+.|.|||.+.++.+
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~--~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQL--GAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCB--CCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECB
T ss_pred CCCEEEEEEeCCCCcccccC--CCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEEC
Confidence 3445555555432100 000 00000111111112343 46799999998777754
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.38 E-value=2.1 Score=37.66 Aligned_cols=155 Identities=10% Similarity=0.103 Sum_probs=81.6
Q ss_pred CCeEEEEEecCCceeeEEEEecc----CceEEEEEecC-CcEE-Ee------cCCCcEEEEEcCCCccceeeecccccee
Q psy10662 12 DHCVHYYDLRNTKEALAVFKGHR----KAVSYVKFLNK-EDIV-SA------STDSQLKLWNINKPNCLRSFVGHINDKN 79 (221)
Q Consensus 12 dg~i~i~~~~~~~~~~~~~~~~~----~~i~~~~~~~~-~~l~-s~------~~d~~v~~wd~~~~~~~~~~~~~~~~v~ 79 (221)
+..|+-|++.....+.+.+..|. ..|..-..+++ +.++ +| ...|.+.+|.++.+. -+.+.+|...-.
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~ 202 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFA 202 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhh
Confidence 45799999975455666665552 34444444443 3333 32 245788899886542 233455543322
Q ss_pred EEEEe--CC-CCEEEEec---CCCeEEEEECCCC-eeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC
Q psy10662 80 FVGLA--TD-GDYVACGS---ENNSLYIYYKGLS-KHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN 152 (221)
Q Consensus 80 ~~~~~--~~-~~~l~~~~---~d~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 152 (221)
.+... +. ...++.+. ..+.++|-++... .....+ ..........-.....-..++..++.-..+..-+.-|
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f--~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G 280 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF--PKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG 280 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCC--ccccccccCCcccccCcceEEEeccccCEEEEEecCc
Confidence 22221 11 11222111 1267888887543 110010 0000000000011233445677788878888899999
Q ss_pred eEEEEEcCCCCceeeee
Q psy10662 153 SLYIYYKGLSKHMHAYR 169 (221)
Q Consensus 153 ~i~~~d~~~~~~~~~~~ 169 (221)
.+.+||+.++..++.-+
T Consensus 281 ~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 281 YIHLYDLETGTCIYMNR 297 (1630)
T ss_pred eEEEEecccchhhhhcc
Confidence 99999999998876554
No 345
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.12 E-value=1.2 Score=32.54 Aligned_cols=92 Identities=7% Similarity=-0.053 Sum_probs=49.0
Q ss_pred CCCceEEEEeCCCeEEEEEecCCceee---EEE----EeccCceEEEEEec----CCcEEEecC--------CCcEEEEE
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEAL---AVF----KGHRKAVSYVKFLN----KEDIVSAST--------DSQLKLWN 61 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~~---~~~----~~~~~~i~~~~~~~----~~~l~s~~~--------d~~v~~wd 61 (221)
|||+.|.++...|.|++++.. +... ..+ .........|+++| ++.|..+.. ...|..|+
T Consensus 27 pdG~~l~V~e~~G~i~~~~~~--g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~ 104 (353)
T 2g8s_A 27 PDNHGMLITLRGGELRHWQAG--KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGR 104 (353)
T ss_dssp STTCCEEEEETTTEEEEEETT--TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCCCEEEEEeCCceEEEEeCC--CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEE
Confidence 577734455678999988753 3221 111 11234578999997 455554422 23566666
Q ss_pred cCCCc----ccee-eec------cccceeEEEEeCCCCEEEEec
Q psy10662 62 INKPN----CLRS-FVG------HINDKNFVGLATDGDYVACGS 94 (221)
Q Consensus 62 ~~~~~----~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~ 94 (221)
+.... .... +.. .......+.|.|+|.++++.+
T Consensus 105 ~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 105 LSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp ECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred ECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 64321 1111 111 111246799999997666643
No 346
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.13 E-value=2.2 Score=32.53 Aligned_cols=116 Identities=6% Similarity=-0.051 Sum_probs=60.7
Q ss_pred cCceEEEEEecCC--cEEEecCCCcEEEEEcCCC---ccceeee-----c----cccceeEEEEeCC----CCEEEEecC
Q psy10662 34 RKAVSYVKFLNKE--DIVSASTDSQLKLWNINKP---NCLRSFV-----G----HINDKNFVGLATD----GDYVACGSE 95 (221)
Q Consensus 34 ~~~i~~~~~~~~~--~l~s~~~d~~v~~wd~~~~---~~~~~~~-----~----~~~~v~~~~~~~~----~~~l~~~~~ 95 (221)
-...+.|+|.|++ .++.+...|.|++++.... ..+..+. + .......++|+|+ +.+.++-+.
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 3457899999876 4888888999999975322 1222111 0 1346788999996 443333221
Q ss_pred --C----------CeEEEEECCCCeeeEEEEeecccceeEeeEE--EeeCceEEEEEecCCCEEEEecCCC
Q psy10662 96 --N----------NSLYIYYKGLSKHMHAYRFDTVRSMLESSFV--GHINDKNFVGLATDGDYVACGSENN 152 (221)
Q Consensus 96 --d----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~ 152 (221)
+ ..|.-|.+.....- . .+....+.+..+. ........++|.|||.+.++.++.+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~-~--~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPH-Q--VDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTT-S--BCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCC-c--cCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13333444321000 0 0011111222221 1123467899999998777666543
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.04 E-value=1.6 Score=33.28 Aligned_cols=29 Identities=10% Similarity=-0.090 Sum_probs=22.1
Q ss_pred ceeEEEEeCCCC-EEEEecCCCeEEEEECC
Q psy10662 77 DKNFVGLATDGD-YVACGSENNSLYIYYKG 105 (221)
Q Consensus 77 ~v~~~~~~~~~~-~l~~~~~d~~v~iwd~~ 105 (221)
..+.|+|.|++. .++++...|.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 457899999996 45556678999999753
No 348
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.01 E-value=2.4 Score=30.23 Aligned_cols=86 Identities=16% Similarity=0.124 Sum_probs=43.9
Q ss_pred CcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec----CCCeEEEEECCCCeeeEEEEeecccceeEeeEEEee
Q psy10662 55 SQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS----ENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHI 130 (221)
Q Consensus 55 ~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (221)
..|+..++...+... +.. .. ...|+++++.|+-.. .+..|..-++..... .. +..+.
T Consensus 88 ~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~-------------lt~~~ 148 (302)
T 3s25_A 88 NSLCRIKRNGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KK-------------IKNHY 148 (302)
T ss_dssp EEEEEEETTSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EE-------------EESSC
T ss_pred CeEEEEeCCCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EE-------------EeCCC
Confidence 457777776654322 221 11 236777888776554 233454445543221 11 11111
Q ss_pred CceEEEEEecCCCEEEEecC-CCeEEEEEcCCCC
Q psy10662 131 NDKNFVGLATDGDYVACGSE-NNSLYIYYKGLSK 163 (221)
Q Consensus 131 ~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~ 163 (221)
+ .+++|+++.|+-.+. ...|...++..+.
T Consensus 149 --~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 149 --L--FTCNTSDRYFYYNNPKNGQLYRYDTASQS 178 (302)
T ss_dssp --C--CCSEEETTEEEEECTTTCCEEEEETTTTE
T ss_pred --c--eEeeEECCEEEEEeCCCceEEEEECCCCC
Confidence 1 346777777765444 5667777765443
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.02 E-value=5.3 Score=32.25 Aligned_cols=155 Identities=7% Similarity=0.029 Sum_probs=77.4
Q ss_pred cCCcEEEecCC----CcEEEEEcCCCccceee-e------ccccceeEEEEeC-CCCEEEEecCC------CeEEEEECC
Q psy10662 44 NKEDIVSASTD----SQLKLWNINKPNCLRSF-V------GHINDKNFVGLAT-DGDYVACGSEN------NSLYIYYKG 105 (221)
Q Consensus 44 ~~~~l~s~~~d----~~v~~wd~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d------~~v~iwd~~ 105 (221)
.+..++.|+.+ ..+.+||..+.+....- . .....-.+++..+ ++..++.|+.+ ..+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 34456666643 45788888776433221 1 1111123333333 67777777653 347788887
Q ss_pred CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCC--eEEEEEcCCCCceeeeeeecccccccccccc
Q psy10662 106 LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENN--SLYIYYKGLSKHMHAYRFDTVRSMLERDRNE 183 (221)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (221)
+.+.... . .+...... .+++...++++++.|+.++ .+.+||..+..-... ..........
T Consensus 477 t~~W~~~------~-----~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~------~~~g~~p~~r 538 (695)
T 2zwa_A 477 TREWSMI------K-----SLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDV------TPKDEFFQNS 538 (695)
T ss_dssp TTEEEEC------C-----CCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEEC------CCSSGGGGSC
T ss_pred CCcEEEC------C-----CCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEc------cCCCCCCCcc
Confidence 7644221 0 01111111 1222324788888888654 688888776542111 1000000011
Q ss_pred cccccceeEEEEcCC-CcEEEEecC--C-----CeEEEEECCccc
Q psy10662 184 DDTNEFVSAVCWRQL-SRVLVAANS--Q-----GIIKIYVIPIRV 220 (221)
Q Consensus 184 ~~~~~~v~~~~~~~~-~~~l~~~~~--d-----g~i~iw~~~~~~ 220 (221)
..| .++.+..+ +++++.|+. + ..+..||+.+.+
T Consensus 539 ~~~----~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 539 LVS----AGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CBS----CEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred cce----eEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 122 33555555 667777765 2 458888887653
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=90.91 E-value=3.7 Score=33.20 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=29.9
Q ss_pred eeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe
Q psy10662 78 KNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF 115 (221)
Q Consensus 78 v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 115 (221)
|.++.+ +..++++-+.|.++++|++.+++++.+...
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444444 467999999999999999999999988865
No 351
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.70 E-value=1.4 Score=34.60 Aligned_cols=90 Identities=8% Similarity=-0.089 Sum_probs=56.3
Q ss_pred EEEEEecC----CceeeEEEEeccCceEEEEEecCCc--EEEecCCCcEEEEEcCCCcc-------------ceeeeccc
Q psy10662 15 VHYYDLRN----TKEALAVFKGHRKAVSYVKFLNKED--IVSASTDSQLKLWNINKPNC-------------LRSFVGHI 75 (221)
Q Consensus 15 i~i~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~--l~s~~~d~~v~~wd~~~~~~-------------~~~~~~~~ 75 (221)
|.+.|.+. .......+. -......+..+|++. ++++-.+.++.++|++.... ..... ..
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G 377 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG 377 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred eeEEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence 56666652 112233333 344556778888665 44556689999999974211 11111 12
Q ss_pred cceeEEEEeCCCCEEEEecCCCeEEEEECCC
Q psy10662 76 NDKNFVGLATDGDYVACGSENNSLYIYYKGL 106 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~ 106 (221)
-.....+|.++|.-..+.--|..|.-|++..
T Consensus 378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred CcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 2457889999996566677899999999854
No 352
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=90.47 E-value=1.5 Score=37.56 Aligned_cols=39 Identities=5% Similarity=-0.080 Sum_probs=32.8
Q ss_pred ceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEe
Q psy10662 77 DKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRF 115 (221)
Q Consensus 77 ~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 115 (221)
.+.+++..++..++++-+.|+++++|++.+++++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 345566677888999999999999999999999988753
No 353
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=90.43 E-value=2 Score=34.73 Aligned_cols=30 Identities=17% Similarity=0.229 Sum_probs=24.4
Q ss_pred ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 189 FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 189 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.|.++.+ +..+|++-+.|.++|+|++.+++
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 3554444 57899999999999999999876
No 354
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=90.03 E-value=8.7 Score=33.11 Aligned_cols=32 Identities=13% Similarity=0.101 Sum_probs=27.4
Q ss_pred ceeEEEEcCCCcEEEEecCCCeEEEEECCccc
Q psy10662 189 FVSAVCWRQLSRVLVAANSQGIIKIYVIPIRV 220 (221)
Q Consensus 189 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 220 (221)
.+.+++..++..++++-+.|+++|+|++.+++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 45566677888999999999999999999875
No 355
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.03 E-value=6.7 Score=31.85 Aligned_cols=175 Identities=18% Similarity=0.190 Sum_probs=92.8
Q ss_pred EEEEeCCCeEEEEEecCCceeeEEEEe-----ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceee-ec----cc
Q psy10662 6 LAFGSADHCVHYYDLRNTKEALAVFKG-----HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSF-VG----HI 75 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~-~~----~~ 75 (221)
|-.|..+ -|..||.. +++ ...+.. ....|.++...+++.|..++.+| +..++..+.+..... .. ..
T Consensus 115 lWigt~~-Gl~~~~~~-~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~ 190 (758)
T 3ott_A 115 LWLGALN-GLYTYQLQ-SRK-LTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSN 190 (758)
T ss_dssp EEEEETT-EEEEEETT-TCC-EEEECHHHHCCSCSCEEEEEECTTCCEEEEETTE-EEEEETTTTEEEEECCCCCTTCSS
T ss_pred EEEEcCC-cceeEeCC-CCe-EEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCCC-HhhCccCCCceEEecCCCcccccc
Confidence 3344444 46667765 332 222311 12457787777677777776654 777887665432111 11 11
Q ss_pred cceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEE
Q psy10662 76 NDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLY 155 (221)
Q Consensus 76 ~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 155 (221)
..|.++...+++..|..|+. +-+..+|..+++..... ......|.++...++|.+.+ |+.+ -+.
T Consensus 191 ~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~-------------~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~ 254 (758)
T 3ott_A 191 LFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTE-------------AFHNNSIKSLALDGNGDLLA-GTDN-GLY 254 (758)
T ss_dssp CCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEE-------------EEEEEEEEEEEECTTCCEEE-EETT-EEE
T ss_pred ceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEecc-------------CCCCCeEEEEEEcCCCCEEE-EeCC-cee
Confidence 24778877777765555554 34778887765432110 11234577888787877555 4444 577
Q ss_pred EEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCC
Q psy10662 156 IYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQG 209 (221)
Q Consensus 156 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 209 (221)
+++..+.... .+.... .. ... -....|.++....+|.+-+. +..|
T Consensus 255 ~~~~~~~~~~-~~~~~~--~~---~~~--l~~~~i~~i~~D~~g~lWiG-T~~G 299 (758)
T 3ott_A 255 VYHNDTTPLQ-HIIHDS--RN---IQS--LTNNIIWNIFADQEHNIWLG-TDYG 299 (758)
T ss_dssp EECCTTSCCE-EECCCT--TC---TTS--CSCSCEEEEEECTTCCEEEE-ESSS
T ss_pred EEecCCCcEE-EEEcCC--CC---cCc--CCcCeEEEEEEcCCCCEEEE-eCCc
Confidence 8886654332 111000 00 000 12345888888877765443 3445
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.95 E-value=3.8 Score=28.85 Aligned_cols=88 Identities=7% Similarity=-0.025 Sum_probs=48.2
Q ss_pred CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEE
Q psy10662 12 DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVA 91 (221)
Q Consensus 12 dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 91 (221)
||.|+.|-....+++- .-......|..++......++. . ||.|..|-......+..-..-...|..++...+ +.+
T Consensus 41 ~G~v~~wG~n~~Gqlg-~p~~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~ 115 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLT-MPAATQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASY 115 (282)
T ss_dssp TTEEEEEECCSSSTTS-CCGGGGSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEE
T ss_pred CCEEEEEeCCCCCCCC-CCccCCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEE
Confidence 8999999866333221 1111233566766554444555 4 899999976542222111111235666666543 333
Q ss_pred EecCCCeEEEEECC
Q psy10662 92 CGSENNSLYIYYKG 105 (221)
Q Consensus 92 ~~~~d~~v~iwd~~ 105 (221)
.-. +|.|..|-..
T Consensus 116 al~-~G~v~~wG~n 128 (282)
T 3qhy_B 116 ALK-DGKVIAWGDD 128 (282)
T ss_dssp EEE-TTEEEEEECC
T ss_pred EEe-CCeEEEecCC
Confidence 344 8899999654
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.95 E-value=3.8 Score=28.85 Aligned_cols=129 Identities=8% Similarity=-0.050 Sum_probs=64.6
Q ss_pred CCeEEEEEecCCceeeEEEEeccCceEEEEEecCCcEEEecCCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEE
Q psy10662 12 DHCVHYYDLRNTKEALAVFKGHRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVA 91 (221)
Q Consensus 12 dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 91 (221)
||.|+.|-....+++- .-..-...|..++......++. . ||.|+.|-......+.........|..++...+ +.+
T Consensus 80 ~G~v~~wG~n~~Gqlg-~P~~~~~~v~~ia~G~~hs~al-~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~ 154 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTT-VPAEARSGVDAIAAGAWASYAL-K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TAL 154 (282)
T ss_dssp TTEEEEEECCTTSTTC-CCGGGSSSEEEEEEETTEEEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEE
T ss_pred CCEEEEeeCCCCCCCC-CCcccCCCeEEEECcCCEEEEE-e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEE
Confidence 8888888765333211 1011134677776554443444 4 999999976543222111122345666655433 322
Q ss_pred EecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCCC
Q psy10662 92 CGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLS 162 (221)
Q Consensus 92 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 162 (221)
.-. ||.|..|-......+.. . ......|..++..... .++. .||.++.|-....
T Consensus 155 ~l~-~G~v~~wG~n~~gqlg~-------p------~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 155 AVK-NGGVIAWGDNYFGQTTV-------P------AEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp EEE-TTEEEEEECCTTSTTSC-------C------GGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTT
T ss_pred EEE-CCEEEEecCCCCCCCCC-------c------eecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCC
Confidence 233 78898886543211100 0 0012345555544332 2333 5899999965443
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=85.02 E-value=8.9 Score=27.71 Aligned_cols=102 Identities=9% Similarity=0.031 Sum_probs=63.5
Q ss_pred CCceEEEEeCCCeEEEEEecCC------ceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcC--CCcc-----
Q psy10662 2 NSCHLAFGSADHCVHYYDLRNT------KEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNIN--KPNC----- 67 (221)
Q Consensus 2 ~~~~l~~~~~dg~i~i~~~~~~------~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~--~~~~----- 67 (221)
+...++.++.+|.|+--.+..- +.....+.. .+.+..+... ....++..+..|.+..+... .-..
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 4678889999999998887520 111112332 3445554444 45668888899998888776 2111
Q ss_pred ----ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECC
Q psy10662 68 ----LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG 105 (221)
Q Consensus 68 ----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 105 (221)
...+. ....|.++...+++.+++..+..|.++.-.+.
T Consensus 187 ~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 187 SGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp BCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 11222 23446666555556688888899988887653
No 359
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=84.07 E-value=10 Score=30.00 Aligned_cols=60 Identities=8% Similarity=0.057 Sum_probs=36.5
Q ss_pred ceEEEEEecCCCEEEEecCC------------CeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCC
Q psy10662 132 DKNFVGLATDGDYVACGSEN------------NSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLS 199 (221)
Q Consensus 132 ~v~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 199 (221)
..-.|+|+|.|+++++-..+ ..+.+.+..+++....+. ......++.++|+||+
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~--------------~P~gaE~TG~~fspDg 542 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV--------------GPIGCEVTGISFSPDQ 542 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE--------------CCTTCEEEEEEECTTS
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe--------------CCCCccCcCeeECCCC
Confidence 34568999999966654332 123344433443322221 1235678999999999
Q ss_pred cEEEEe
Q psy10662 200 RVLVAA 205 (221)
Q Consensus 200 ~~l~~~ 205 (221)
+.|+..
T Consensus 543 ~tlfvn 548 (592)
T 3zwu_A 543 KTLFVG 548 (592)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 988775
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=83.86 E-value=9.8 Score=27.25 Aligned_cols=201 Identities=9% Similarity=0.071 Sum_probs=104.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCc------eeeE--EEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCC-------
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTK------EALA--VFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINK------- 64 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~------~~~~--~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~------- 64 (221)
|+...+++.+.+|.|+--.+..-. .-+. .+. ..+.+..+... ....++..+..|.++-+....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 356778899999999988765210 0111 122 22344444443 456688888899887776532
Q ss_pred --Cccc---eeeeccccceeEEEEeC---CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEE
Q psy10662 65 --PNCL---RSFVGHINDKNFVGLAT---DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFV 136 (221)
Q Consensus 65 --~~~~---~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 136 (221)
|..+ ..+.. ...|..+...+ +..+++..+.+|.++-..+..-...+ ..+.....+.. ...+..+
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r------~~G~~~i~L~~-~d~lv~~ 156 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK------SRGVIVIKLND-KDFVTSA 156 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----------CEECBCCCT-TCCEEEE
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC------CCcEEEEecCC-CCEEEEE
Confidence 1111 11222 23344443332 45678888899999888764322111 01111112222 3445555
Q ss_pred EEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662 137 GLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 137 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 216 (221)
........++..+.+|.+..+....-.... . ...-.....+.. ...|.++..-+++..|++.+..|..+...+
T Consensus 157 ~~~~~~~~i~l~T~~G~~~r~~~~ev~~~g-----R-~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~ 229 (312)
T 1suu_A 157 EIVFKDEKVICLSKKGSAFIFNSRDVRLTN-----R-GTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNM 229 (312)
T ss_dssp EEECTTCEEEEEETTSEEEEEEGGGSCBCC-----T-TBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEG
T ss_pred EEeCCCCEEEEEeCCCcEEEEEHHHccccC-----C-CCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEH
Confidence 444445678888889998888764311100 0 000001111112 334555555455666778888888887776
Q ss_pred C
Q psy10662 217 P 217 (221)
Q Consensus 217 ~ 217 (221)
.
T Consensus 230 ~ 230 (312)
T 1suu_A 230 S 230 (312)
T ss_dssp G
T ss_pred H
Confidence 4
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.24 E-value=12 Score=29.46 Aligned_cols=62 Identities=11% Similarity=0.069 Sum_probs=36.9
Q ss_pred CceEEEEEecCCCEEEEecC------------CCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCC
Q psy10662 131 NDKNFVGLATDGDYVACGSE------------NNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQL 198 (221)
Q Consensus 131 ~~v~~~~~~~~~~~l~~~~~------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 198 (221)
.....+.|+++|.+.++... ...+..++..+++....+. ......++.++|+||
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~--------------~P~~aEpnGiafSPD 541 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV--------------GPIGCEVTGISFSPD 541 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE--------------CCTTCEEEEEEECTT
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe--------------CCCCccccCCEECCC
Confidence 34567899999987763221 1144444444444322221 012346899999999
Q ss_pred CcEEEEec
Q psy10662 199 SRVLVAAN 206 (221)
Q Consensus 199 ~~~l~~~~ 206 (221)
++.|+++-
T Consensus 542 ~ktLfV~v 549 (592)
T 4a9v_A 542 QKTLFVGI 549 (592)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEE
Confidence 99888753
No 362
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=82.63 E-value=10 Score=26.59 Aligned_cols=149 Identities=5% Similarity=-0.032 Sum_probs=80.3
Q ss_pred CceEEEEeCCCeEEEEEecCC-----ceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCCCc---------c
Q psy10662 3 SCHLAFGSADHCVHYYDLRNT-----KEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINKPN---------C 67 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~-----~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~~~---------~ 67 (221)
...++..+.+|.++-..+..- +.....+. ..+.+..+... ....++..+..|.+..+....-. .
T Consensus 80 ~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~ 158 (276)
T 3no0_A 80 GNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQ 158 (276)
T ss_dssp CSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEE
T ss_pred CCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEE
Confidence 467888899999999887521 11112233 23455555444 35568888899998888764321 1
Q ss_pred ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEE
Q psy10662 68 LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVAC 147 (221)
Q Consensus 68 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 147 (221)
...+.. ...|..+...+++..++..+..|.++...+..-... .+...-...+ .....+..+........++.
T Consensus 159 ~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~------~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~ 230 (276)
T 3no0_A 159 GIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKT------NRGVKGTEVS-GTKDTLVDLIPIKEEVELLI 230 (276)
T ss_dssp CCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCC------CTTCCCEECC-CSSSCEEEEEEESSEEEEEE
T ss_pred EEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccC------CCCCcceEEE-cCCCcEEEEEEeCCCCEEEE
Confidence 112222 244555555555667888888888888765422111 0111111111 12233433333233345666
Q ss_pred ecCCCeEEE--EEcC
Q psy10662 148 GSENNSLYI--YYKG 160 (221)
Q Consensus 148 ~~~d~~i~~--~d~~ 160 (221)
.+.+|.+.. ++..
T Consensus 231 ~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 231 TTKNGKAFYDKINQK 245 (276)
T ss_dssp EETTSCEEEEEEEGG
T ss_pred EcCCCeEEEeeeCHH
Confidence 677777766 6653
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=76.59 E-value=19 Score=28.47 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=37.4
Q ss_pred ceEEEEEecCCcEEEecCC-------------CcEEEEEcCCCccceeeecc-ccceeEEEEeCCCCEEEEe
Q psy10662 36 AVSYVKFLNKEDIVSASTD-------------SQLKLWNINKPNCLRSFVGH-INDKNFVGLATDGDYVACG 93 (221)
Q Consensus 36 ~i~~~~~~~~~~l~s~~~d-------------~~v~~wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 93 (221)
....|.|.+++.|..+... ..+..++..+++....+... ...++.++|+||++.|++.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 3567888876666653321 24666666667665544432 3568999999999877654
No 364
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=75.70 E-value=19 Score=25.61 Aligned_cols=64 Identities=17% Similarity=0.102 Sum_probs=34.5
Q ss_pred EEec-CCcEEEec----CCCcEEEEEcCCCccceeeeccccceeEEEEeCCCCEEEEec-CCCeEEEEECCCCee
Q psy10662 41 KFLN-KEDIVSAS----TDSQLKLWNINKPNCLRSFVGHINDKNFVGLATDGDYVACGS-ENNSLYIYYKGLSKH 109 (221)
Q Consensus 41 ~~~~-~~~l~s~~----~d~~v~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~ 109 (221)
.|++ ++.|+-.. .+..|...++... ....+..+.. .+++|+++.|+-.+ ....|..-++..+..
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~ 179 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE 179 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE
Confidence 4554 55555443 3445555565433 3334433322 35677787765444 356787777765543
No 365
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.56 E-value=13 Score=29.38 Aligned_cols=57 Identities=12% Similarity=0.053 Sum_probs=37.4
Q ss_pred eEEEEEecCCcEEEecCC-------------CcEEEEEcCCCccceeeecc-ccceeEEEEeCCCCEEEEe
Q psy10662 37 VSYVKFLNKEDIVSASTD-------------SQLKLWNINKPNCLRSFVGH-INDKNFVGLATDGDYVACG 93 (221)
Q Consensus 37 i~~~~~~~~~~l~s~~~d-------------~~v~~wd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 93 (221)
.--|+|+|.+.|+.+-.. ..+.+.+..+++..+.+..+ ..+++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 356888887776665432 23455566666665555444 4589999999999876554
No 366
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=73.86 E-value=25 Score=26.11 Aligned_cols=157 Identities=7% Similarity=0.006 Sum_probs=83.3
Q ss_pred cEEEEEcCCC--ccceeeecc------ccceeEEEEe---CC----CCEE-EEecCCCeEEEEECCCCeeeEEEEeeccc
Q psy10662 56 QLKLWNINKP--NCLRSFVGH------INDKNFVGLA---TD----GDYV-ACGSENNSLYIYYKGLSKHMHAYRFDTVR 119 (221)
Q Consensus 56 ~v~~wd~~~~--~~~~~~~~~------~~~v~~~~~~---~~----~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~ 119 (221)
.|.+||+.+. +.++.+.-. ...+..+.+. |+ +.++ ++=+..+.|.|+|+.+++..+...-....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5889999998 888766421 3457788887 22 2333 33345678999999999887765211000
Q ss_pred -ceeEeeEEE----eeCceEEEEEecC----CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccce
Q psy10662 120 -SMLESSFVG----HINDKNFVGLATD----GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFV 190 (221)
Q Consensus 120 -~~~~~~~~~----~~~~v~~~~~~~~----~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 190 (221)
........+ -...+..++++|+ ++.|.-....+ -++|.+.+.-.... ........+ ...+....-
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~----~~~~~v~~~-G~kg~~s~~ 277 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQK----GGKLNPELL-GNRGKYNDA 277 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSST----TCCCCCEEE-EECCTTCCE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCc----chhhceEEe-eecCCCCCc
Confidence 001111111 1346888999987 55555444333 12332221100000 000000000 001111222
Q ss_pred eEEEEc-CCCcEEEEecCCCeEEEEECCc
Q psy10662 191 SAVCWR-QLSRVLVAANSQGIIKIYVIPI 218 (221)
Q Consensus 191 ~~~~~~-~~~~~l~~~~~dg~i~iw~~~~ 218 (221)
..++.+ .+|.++++--..+.|..|+..+
T Consensus 278 ~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 278 IALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred ceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 346675 6788888888899999999865
No 367
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=68.59 E-value=27 Score=24.43 Aligned_cols=121 Identities=4% Similarity=-0.042 Sum_probs=67.3
Q ss_pred cCceEEEEEe--cCCcEEEecCCCcEEEEEcCCCc------cceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECC
Q psy10662 34 RKAVSYVKFL--NKEDIVSASTDSQLKLWNINKPN------CLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG 105 (221)
Q Consensus 34 ~~~i~~~~~~--~~~~l~s~~~d~~v~~wd~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~ 105 (221)
...|..+... ++..++..+.+|.++-..+..-. ....++. .+.+..+....+.+.++..+..|.+..+...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 4456665432 34568899999999998875432 1112322 2345555444455677778888888777643
Q ss_pred CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662 106 LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG 160 (221)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 160 (221)
.-.... ....+.....+. ....|..+...+++..++..+..|.++...+.
T Consensus 146 eip~~g----R~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 146 EVPPST----PGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp GSCBCC----TTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred hCCCcC----CCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 211100 000111111121 12445555444556688888899998888764
No 368
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=65.11 E-value=36 Score=24.52 Aligned_cols=202 Identities=8% Similarity=0.019 Sum_probs=101.9
Q ss_pred CCCceEEEEeCCCeEEEEEecC---CceeeEEEEeccCceEEEEEe-cCCcEEEecCCCcEEEEEcCC---------Ccc
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRN---TKEALAVFKGHRKAVSYVKFL-NKEDIVSASTDSQLKLWNINK---------PNC 67 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~---~~~~~~~~~~~~~~i~~~~~~-~~~~l~s~~~d~~v~~wd~~~---------~~~ 67 (221)
|+...+++.+.+|.|+--.+.. .+..-..++. .+.+..+... ....++..+..|.++-+.... |.+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 5677889999999999776541 1111112222 2344444333 456677778888876665422 222
Q ss_pred cee---eeccccceeEE-EEeC--CCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEecC
Q psy10662 68 LRS---FVGHINDKNFV-GLAT--DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATD 141 (221)
Q Consensus 68 ~~~---~~~~~~~v~~~-~~~~--~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 141 (221)
+.. +. ....|..+ ...+ +..+++..+.+|.++-..+..-..... ..+.....+... ..+..+.....
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r-----~~G~~ai~l~e~-d~lv~~~~~~~ 154 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY-----SKPLTGINLKND-DQVVDVHLTDG 154 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC-----SSCEECSCCCTT-CCEEEEEEECS
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc-----cCceEEEEeCCC-CEEEEEEEeCC
Confidence 111 22 12335444 3332 256788889999999887642211100 011111112211 34444444444
Q ss_pred CCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCc-EEEEecCCCeEEEEECC
Q psy10662 142 GDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSR-VLVAANSQGIIKIYVIP 217 (221)
Q Consensus 142 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~ 217 (221)
...++..+.+|.+..+....-... .....+. ....+. ....|.++..-+++. .|+..+..|..+..++.
T Consensus 155 ~~~i~l~T~~G~~irf~~~ev~~~---gR~a~GV---~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 155 MNELFLVTHNGYALWFDESEVSIV---GVRAAGV---KGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp CSEEEEEETTSEEEEEEGGGSCBC---CSSCCCE---ECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEeCCCcEEEEEHHHCccc---CCCCcCE---EEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 556777888898888876432111 0000010 111111 223455554434444 67777788877766653
No 369
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=62.15 E-value=40 Score=24.03 Aligned_cols=199 Identities=13% Similarity=0.058 Sum_probs=100.5
Q ss_pred CCCceEEEEeCCCeEEEEEecCCcee-------eE--EEEeccCceEEEEE-ecCCcEEEecCCCcEEEEEcCC------
Q psy10662 1 MNSCHLAFGSADHCVHYYDLRNTKEA-------LA--VFKGHRKAVSYVKF-LNKEDIVSASTDSQLKLWNINK------ 64 (221)
Q Consensus 1 ~~~~~l~~~~~dg~i~i~~~~~~~~~-------~~--~~~~~~~~i~~~~~-~~~~~l~s~~~d~~v~~wd~~~------ 64 (221)
|+...+++.+.+|.|+--.+. ..+. +. .++. .+.+..+.. +....++..+..|.++-+....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~-~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLS-EYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATR 78 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC----------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCS
T ss_pred CCCcEEEEEeCCCEEEEeeHH-HhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCC
Confidence 567788999999999876654 2111 11 1222 233433333 3456677778888876665422
Q ss_pred ---Cccce---eeeccccceeEEEEe---CCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEE
Q psy10662 65 ---PNCLR---SFVGHINDKNFVGLA---TDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNF 135 (221)
Q Consensus 65 ---~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 135 (221)
|.++. .+. ....|..+..- ++..+++..+.+|.++--.+..-.... ..+.....+... ..+..
T Consensus 79 ~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~------r~G~~~i~l~~~-d~lv~ 150 (307)
T 1zi0_A 79 GARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLR------TAGKVAIKLVDG-DELIG 150 (307)
T ss_dssp SSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCC------TTCEESSCCCTT-CCEEE
T ss_pred CCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccc------cCCeEEEEECCC-CEEEE
Confidence 22221 122 22345444332 345678888999999888654211110 011111112222 34444
Q ss_pred EEEecCCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEE
Q psy10662 136 VGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYV 215 (221)
Q Consensus 136 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~ 215 (221)
+........++..+.+|.+..+....-.... ....+. ....+. ....|.++...+++..|+..+..|..+-.+
T Consensus 151 ~~~~~~~~~i~l~T~~G~~irf~~~~v~~~g---r~a~Gv---~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~ 223 (307)
T 1zi0_A 151 VDLTSGEDEVMLFSAEGKVVRFKESSVRAMG---CNTTGV---RGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTA 223 (307)
T ss_dssp EEEECTTCEEEEEETTSEEEEEEGGGSCBCC---TTCCCE---ECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEEC
T ss_pred EEEeCCCCEEEEECCCCcEEEEEHHHcCccC---CCCCCe---EeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEE
Confidence 4444444567778888888777754321110 000000 011111 233455555445556788888888888776
Q ss_pred C
Q psy10662 216 I 216 (221)
Q Consensus 216 ~ 216 (221)
+
T Consensus 224 ~ 224 (307)
T 1zi0_A 224 V 224 (307)
T ss_dssp G
T ss_pred H
Confidence 5
No 370
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=59.20 E-value=50 Score=24.19 Aligned_cols=97 Identities=5% Similarity=-0.012 Sum_probs=48.6
Q ss_pred ceEEEEeCCCeEEEEEecCCceeeEEE--EeccCceEEEEEec--CCcEEEecCCC----cEEEEEcCCCccceeee---
Q psy10662 4 CHLAFGSADHCVHYYDLRNTKEALAVF--KGHRKAVSYVKFLN--KEDIVSASTDS----QLKLWNINKPNCLRSFV--- 72 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~~~~~~~~~~~--~~~~~~i~~~~~~~--~~~l~s~~~d~----~v~~wd~~~~~~~~~~~--- 72 (221)
..|.+|...| +.+++....++.-... ......|.+|++.| .+.+.+++..| .|...+ ..++.-..+.
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccc
Confidence 3566777777 5555543212222222 12245699999987 66677776655 343332 2222111111
Q ss_pred ---c--------cccceeEEEEeCC--CCEEEEecCCCeEEEE
Q psy10662 73 ---G--------HINDKNFVGLATD--GDYVACGSENNSLYIY 102 (221)
Q Consensus 73 ---~--------~~~~v~~~~~~~~--~~~l~~~~~d~~v~iw 102 (221)
. ....|.++++.|. ...+..++..+.|...
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 0 1124778888862 3455555555555443
No 371
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=54.48 E-value=56 Score=25.25 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=23.1
Q ss_pred ccceeEEEEcCCCcEEEEecCCCeEEE
Q psy10662 187 NEFVSAVCWRQLSRVLVAANSQGIIKI 213 (221)
Q Consensus 187 ~~~v~~~~~~~~~~~l~~~~~dg~i~i 213 (221)
..+|..+.++++..+|+.++.++.+++
T Consensus 461 ~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 461 PTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCccceEEEcCCCCEEEEEECCeEEEE
Confidence 467899999999999999998876664
No 372
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=53.04 E-value=43 Score=27.08 Aligned_cols=28 Identities=14% Similarity=0.218 Sum_probs=23.7
Q ss_pred cccceeEEEEcCCCcEEEEecCCCeEEE
Q psy10662 186 TNEFVSAVCWRQLSRVLVAANSQGIIKI 213 (221)
Q Consensus 186 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i 213 (221)
...+|..+.+++++..|+.++.++.+++
T Consensus 468 ~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 468 EPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4567899999999999999998887664
No 373
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=52.70 E-value=62 Score=23.34 Aligned_cols=120 Identities=11% Similarity=0.050 Sum_probs=67.7
Q ss_pred CceEEEEEe----cCCcEEEecCCCcEEEEEcCCCcc-------ceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEE
Q psy10662 35 KAVSYVKFL----NKEDIVSASTDSQLKLWNINKPNC-------LRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYY 103 (221)
Q Consensus 35 ~~i~~~~~~----~~~~l~s~~~d~~v~~wd~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd 103 (221)
..|.++... ++..++.++.+|.++--.+..... ...++. .+.+..+........++..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 345555433 256799999999999988754221 122333 33444444444556777778888887776
Q ss_pred CC--CCeeeEEEEeecccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcC
Q psy10662 104 KG--LSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKG 160 (221)
Q Consensus 104 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 160 (221)
.. .-.... ....+.....+. ....|.++...+.+..++..+..|.++.-.+.
T Consensus 174 ~~~~eip~~g----r~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 174 ATDEALRPMG----RATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp CCTTTSCCCC----TTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CcccccCcCC----cCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 65 211110 000111111121 23445555555556688889999998887654
No 374
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=50.94 E-value=88 Score=24.53 Aligned_cols=72 Identities=10% Similarity=0.013 Sum_probs=41.3
Q ss_pred ceEEEEEecCC--CEEEEecCCCeEEEEEcCCCCce-eeeeeeccccccccccccccccccee-EEEEcCCCcEEEEecC
Q psy10662 132 DKNFVGLATDG--DYVACGSENNSLYIYYKGLSKHM-HAYRFDTVRSMLERDRNEDDTNEFVS-AVCWRQLSRVLVAANS 207 (221)
Q Consensus 132 ~v~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~ 207 (221)
..+.++....+ ..+..|+.+|.|.-..+...... ..+. .+ .+.....+|. .+.+++++.+|+.++.
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e---------~~-~v~~~~~pv~~~l~~~~~~~~Lyv~s~ 470 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYE---------MV-SVFKDGSPILRDMAFSINQLYLYVMSE 470 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEE---------EE-ECCTTCCCCCSCCEECTTSSEEEEECS
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEE---------EE-EeecCCCccccceEEccCCCeEEEEec
Confidence 45666655433 35777888888765444322111 0110 00 0112234674 8999999999999988
Q ss_pred CCeEEE
Q psy10662 208 QGIIKI 213 (221)
Q Consensus 208 dg~i~i 213 (221)
.+.+++
T Consensus 471 ~~V~kv 476 (539)
T 3al9_A 471 RQVTRV 476 (539)
T ss_dssp SEEEEE
T ss_pred ccccee
Confidence 766554
No 375
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=49.22 E-value=76 Score=23.32 Aligned_cols=204 Identities=8% Similarity=-0.028 Sum_probs=86.4
Q ss_pred eEEEEeCCCeEEEEEecCCcee-------eEEEEe----ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcc------
Q psy10662 5 HLAFGSADHCVHYYDLRNTKEA-------LAVFKG----HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNC------ 67 (221)
Q Consensus 5 ~l~~~~~dg~i~i~~~~~~~~~-------~~~~~~----~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~------ 67 (221)
.++.-..||.|..|-....+++ ...... ....+..++- -....+.-..||.|..|-......
T Consensus 12 ~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~-G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~ 90 (389)
T 3kci_A 12 ENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG-GEQTLFAVTADGKLYATGYGAGGRLGIGGT 90 (389)
T ss_dssp ---------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEE-ETTEEEEEETTSCEEEEECCGGGTTSSSSS
T ss_pred cceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEe-CCCeEEEEcCCCcEEEEECCCCCCCCCCCc
Confidence 4455567899999976532211 111110 1123444432 234456667899999996532110
Q ss_pred --c---eeeec-cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEe-eCceEEEEEec
Q psy10662 68 --L---RSFVG-HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGH-INDKNFVGLAT 140 (221)
Q Consensus 68 --~---~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~ 140 (221)
. ..+.. ....+..++++....+.+.-..||.|..|-....-.+..- +.........+... ...|..++.
T Consensus 91 ~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g--~~~~~~~p~~v~~l~~~~i~~va~-- 166 (389)
T 3kci_A 91 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAA-- 166 (389)
T ss_dssp CCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSS--SCCCEEEEEECGGGTTSCEEEEEE--
T ss_pred CCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCC--CCccCcCCeEecccCCCeEEEEEe--
Confidence 0 01111 1123455666666667777788999999954321100000 00000000001100 113444433
Q ss_pred CCCEEEEecCCCeEEEEEcCCCCceeeeeeecccccccccccccccccceeEEEEcCCCcEEEEecCCCeEEEEEC
Q psy10662 141 DGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVLVAANSQGIIKIYVI 216 (221)
Q Consensus 141 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 216 (221)
.....++-..+|.|+.|-......+..-... .......+..+ ....|..++........+....||.|..|-.
T Consensus 167 G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~-~~~~p~~v~~~--~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 167 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSE-DQLKPKLVEAL--QGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp CSSEEEEEETTSCEEEEECCGGGTTCSSSCC-CEEEEEECGGG--TTSCEEEEEECCSSCEEEEEETTTEEEEEEC
T ss_pred CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCc-ccccceEeccc--CCCeEEEEEEcCCCcEEEEEccCCEEEEEeC
Confidence 3445566667889999965432211100000 00000011111 1234556665432344555567888888854
No 376
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=46.72 E-value=69 Score=22.11 Aligned_cols=150 Identities=5% Similarity=-0.100 Sum_probs=78.2
Q ss_pred CceEEEEeCCCeEEEEEecCCceeeEEEEeccCceEEEEE-ecCCcEEEecCCCcEEEEEcCC-------Cccce---ee
Q psy10662 3 SCHLAFGSADHCVHYYDLRNTKEALAVFKGHRKAVSYVKF-LNKEDIVSASTDSQLKLWNINK-------PNCLR---SF 71 (221)
Q Consensus 3 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~l~s~~~d~~v~~wd~~~-------~~~~~---~~ 71 (221)
....++.+.+|.|+--....-......+.. .+.+..+.. .....++..+..|.++-+.... +..+. .+
T Consensus 2 E~v~v~lT~~G~iKr~~~~~~~~~~~~lke-~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L 80 (256)
T 1zvt_A 2 EPVTIVLSQMGWVRSAKGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTL 80 (256)
T ss_dssp CEEEEEEETTSEEEEEESSCCCSTTSCCCT-TCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCC
T ss_pred CCEEEEEeCCCEEEEeeCCcCCceeccCCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecC
Confidence 345677788998876554311110112232 234444433 3456677778888876665422 22111 12
Q ss_pred eccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEeeCceEEEEEe-cCCCEEEEecC
Q psy10662 72 VGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGHINDKNFVGLA-TDGDYVACGSE 150 (221)
Q Consensus 72 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 150 (221)
. ....|..+....+..+++.++..|.++...+..-... ...+.....+.. ...+..+... ..+..++..+.
T Consensus 81 ~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~------~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~ 152 (256)
T 1zvt_A 81 P-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVAR------NRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQ 152 (256)
T ss_dssp C-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCC------STTCEECBCCCT-TCCBCCCEECCCTTCEEEEEET
T ss_pred C-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhccc------CcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcC
Confidence 2 2335555543345567888899999998876432110 011111122221 2233333333 24457888888
Q ss_pred CCeEEEEEcCC
Q psy10662 151 NNSLYIYYKGL 161 (221)
Q Consensus 151 d~~i~~~d~~~ 161 (221)
+|.+..+....
T Consensus 153 ~G~~lrf~~~e 163 (256)
T 1zvt_A 153 AGRMLMFPVSD 163 (256)
T ss_dssp TSEEEEEEGGG
T ss_pred CCeEEEEEHHH
Confidence 89888887653
No 377
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=45.36 E-value=87 Score=22.89 Aligned_cols=51 Identities=4% Similarity=-0.104 Sum_probs=26.2
Q ss_pred CCcEEEecCCCcEEEEEcCC-Cccceee--eccccceeEEEEeC--CCCEEEEecCCC
Q psy10662 45 KEDIVSASTDSQLKLWNINK-PNCLRSF--VGHINDKNFVGLAT--DGDYVACGSENN 97 (221)
Q Consensus 45 ~~~l~s~~~d~~v~~wd~~~-~~~~~~~--~~~~~~v~~~~~~~--~~~~l~~~~~d~ 97 (221)
.+.|..+...| +.+++... ++.-..+ ......|.++++.| .+.+++ ++..|
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~-g~~~g 77 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLM-AARTG 77 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEE-EEEC-
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEE-EecCC
Confidence 45677777777 44454332 2222111 11234689999998 444444 44443
No 378
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=42.83 E-value=1.2e+02 Score=23.57 Aligned_cols=66 Identities=9% Similarity=-0.000 Sum_probs=42.0
Q ss_pred ceEEEEEec-----CCc--EEEecCCCcEEEEEcC-CCc-------cceeee--ccccceeEEEEeCCCCEEEEecCCCe
Q psy10662 36 AVSYVKFLN-----KED--IVSASTDSQLKLWNIN-KPN-------CLRSFV--GHINDKNFVGLATDGDYVACGSENNS 98 (221)
Q Consensus 36 ~i~~~~~~~-----~~~--l~s~~~d~~v~~wd~~-~~~-------~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~ 98 (221)
..++|+... +++ ++.|..+|.|.-.-+. ... .+..+. ....+|..+.++++..+|..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 467776652 222 7788889987544332 211 222232 23568999999999999999988886
Q ss_pred EEE
Q psy10662 99 LYI 101 (221)
Q Consensus 99 v~i 101 (221)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 379
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=42.35 E-value=1.3e+02 Score=23.95 Aligned_cols=60 Identities=17% Similarity=0.275 Sum_probs=36.2
Q ss_pred cEEEEEcCCCccceeee--------ccccceeEEEEeCCCC-EEEEecCCCe----------------------------
Q psy10662 56 QLKLWNINKPNCLRSFV--------GHINDKNFVGLATDGD-YVACGSENNS---------------------------- 98 (221)
Q Consensus 56 ~v~~wd~~~~~~~~~~~--------~~~~~v~~~~~~~~~~-~l~~~~~d~~---------------------------- 98 (221)
.|.+|++. ++.+..+. .|..++....|.-||+ -++....+|+
T Consensus 152 ~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEy 230 (591)
T 2zux_A 152 LIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEY 230 (591)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcE
Confidence 46666664 44333332 1333466667777775 3555544443
Q ss_pred EEEEECCCCeeeEEEEee
Q psy10662 99 LYIYYKGLSKHMHAYRFD 116 (221)
Q Consensus 99 v~iwd~~~~~~~~~~~~~ 116 (221)
+.++|=.+++.+.++.+.
T Consensus 231 L~vfdG~TG~~l~~~~~~ 248 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFE 248 (591)
T ss_dssp EEEEETTTCCEEEEEECS
T ss_pred EEEEeCCCCCEEecccCC
Confidence 788898888888876554
No 380
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=41.26 E-value=1.3e+02 Score=23.63 Aligned_cols=67 Identities=10% Similarity=0.034 Sum_probs=42.2
Q ss_pred CceEEEEEec-CCc--EEEecCCCcEEEEEcCCCc----cceeee--cccccee-EEEEeCCCCEEEEecCCCeEEE
Q psy10662 35 KAVSYVKFLN-KED--IVSASTDSQLKLWNINKPN----CLRSFV--GHINDKN-FVGLATDGDYVACGSENNSLYI 101 (221)
Q Consensus 35 ~~i~~~~~~~-~~~--l~s~~~d~~v~~wd~~~~~----~~~~~~--~~~~~v~-~~~~~~~~~~l~~~~~d~~v~i 101 (221)
...++|+... +++ ++.|..+|.|.-..+.... .+..+. ....+|. .+.+++++.+|..++..+.++|
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3567777654 333 7788899988655553221 122221 2245774 8999998889988888775555
No 381
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=40.75 E-value=97 Score=22.10 Aligned_cols=111 Identities=9% Similarity=-0.000 Sum_probs=63.4
Q ss_pred CCcEEEecCCCcEEEEEcCCC-------ccceeeeccccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeec
Q psy10662 45 KEDIVSASTDSQLKLWNINKP-------NCLRSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDT 117 (221)
Q Consensus 45 ~~~l~s~~~d~~v~~wd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~ 117 (221)
+..++..+..|.++...+..- .....+.. .+.+..+........++..+.+|.+..+....-.... ..
T Consensus 114 ~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~g----R~ 188 (312)
T 1suu_A 114 DAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTN----RG 188 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC----TT
T ss_pred CCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccC----CC
Confidence 456888899999998887432 22222333 3455555554445677788888988888764311100 00
Q ss_pred ccceeEeeEEEeeCceEEEEEecCCCEEEEecCCCeEEEEEcCC
Q psy10662 118 VRSMLESSFVGHINDKNFVGLATDGDYVACGSENNSLYIYYKGL 161 (221)
Q Consensus 118 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 161 (221)
..+.....+.. ...+..+..-+++..+++.+..|..+...+..
T Consensus 189 ~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 189 TQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp BCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred CCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 11111112221 33455554444566788888899988887643
No 382
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=38.22 E-value=1.2e+02 Score=24.00 Aligned_cols=27 Identities=22% Similarity=0.212 Sum_probs=22.9
Q ss_pred ccceeEEEEcCCCcEEEEecCCCeEEE
Q psy10662 187 NEFVSAVCWRQLSRVLVAANSQGIIKI 213 (221)
Q Consensus 187 ~~~v~~~~~~~~~~~l~~~~~dg~i~i 213 (221)
..+|..+.++++...|+.++.++.+++
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qV 495 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKV 495 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEE
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEe
Confidence 456889999999999999998887775
No 383
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=37.87 E-value=1.2e+02 Score=22.47 Aligned_cols=168 Identities=8% Similarity=0.023 Sum_probs=88.5
Q ss_pred eEEEEEecCCc--eeeEEEEec------cCceEEEEEe---c-----CCc-EEEecCCCcEEEEEcCCCccceeeecc--
Q psy10662 14 CVHYYDLRNTK--EALAVFKGH------RKAVSYVKFL---N-----KED-IVSASTDSQLKLWNINKPNCLRSFVGH-- 74 (221)
Q Consensus 14 ~i~i~~~~~~~--~~~~~~~~~------~~~i~~~~~~---~-----~~~-l~s~~~d~~v~~wd~~~~~~~~~~~~~-- 74 (221)
.|.+||+. +. +.++.+.-. .+.+..+++. | +++ .++=+..+-|.|+|+.+++..+....+
T Consensus 124 kLv~~DL~-t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLK-QPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESS-STTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECC-CCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 57889998 55 777766532 3457888887 2 223 444455788999999887655443110
Q ss_pred ----------------ccceeEEEEeCC----CCEEEEecCCCeEEEEECCCCeeeEEEEee----cccceeEeeEEEee
Q psy10662 75 ----------------INDKNFVGLATD----GDYVACGSENNSLYIYYKGLSKHMHAYRFD----TVRSMLESSFVGHI 130 (221)
Q Consensus 75 ----------------~~~v~~~~~~~~----~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 130 (221)
...+..++++|+ ++.|. |..-++..+..+... ......++ ..+..
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LY----------f~plss~~ly~V~T~~L~~~~~~~~v~-~~G~k 271 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAY----------YLAGSAIKVYSVNTKELKQKGGKLNPE-LLGNR 271 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEE----------EEESSCSEEEEEEHHHHSSTTCCCCCE-EEEEC
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEE----------EEECCCCcEEEEEHHHhhCcchhhceE-Eeeec
Confidence 124555666665 33332 222222222222100 00011111 12222
Q ss_pred ---CceEEEEEe-cCCCEEEEecCCCeEEEEEcCC-C---CceeeeeeecccccccccccccccccceeEEEEcCCCcEE
Q psy10662 131 ---NDKNFVGLA-TDGDYVACGSENNSLYIYYKGL-S---KHMHAYRFDTVRSMLERDRNEDDTNEFVSAVCWRQLSRVL 202 (221)
Q Consensus 131 ---~~v~~~~~~-~~~~~l~~~~~d~~i~~~d~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 202 (221)
..-..++++ .+|.++++--+...|..|+... . +....+.-+ ..-..+..+.+.++|.+.
T Consensus 272 g~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d-------------~~l~~pd~~~i~~~g~Lw 338 (381)
T 3q6k_A 272 GKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTS-------------SRFVFGTDISVDSKGGLW 338 (381)
T ss_dssp CTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEEC-------------TTCCSEEEEEECTTSCEE
T ss_pred CCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEEC-------------CCccccCeEEECCCCeEE
Confidence 233456675 6788888888889999999765 1 111222111 122356777787777655
Q ss_pred EEec
Q psy10662 203 VAAN 206 (221)
Q Consensus 203 ~~~~ 206 (221)
+..+
T Consensus 339 v~sn 342 (381)
T 3q6k_A 339 FMSN 342 (381)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5543
No 384
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=35.57 E-value=67 Score=18.75 Aligned_cols=17 Identities=6% Similarity=-0.330 Sum_probs=9.9
Q ss_pred ceEEEEeCCCeEEEEEe
Q psy10662 4 CHLAFGSADHCVHYYDL 20 (221)
Q Consensus 4 ~~l~~~~~dg~i~i~~~ 20 (221)
.+.+.-..||.+.+|+.
T Consensus 25 ~~~L~~q~dGNLvL~~~ 41 (113)
T 3mez_B 25 DYSLVMRDDCNLVLTKG 41 (113)
T ss_dssp TEEEEECTTSCEEEEET
T ss_pred CEEEEEcCCCEEEEEEC
Confidence 33344456777777764
No 385
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=35.52 E-value=1.5e+02 Score=23.64 Aligned_cols=54 Identities=4% Similarity=-0.026 Sum_probs=35.0
Q ss_pred EEEecCCCcEEEEEcCC-Cc---c--ceeee--ccccceeEEEEeCCCCEEEEecCCCeEEE
Q psy10662 48 IVSASTDSQLKLWNINK-PN---C--LRSFV--GHINDKNFVGLATDGDYVACGSENNSLYI 101 (221)
Q Consensus 48 l~s~~~d~~v~~wd~~~-~~---~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 101 (221)
++.|..+|.|.-.-+.. +. . +..+. ....+|..+.++++...|..++.++.+++
T Consensus 383 lFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 383 LYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 67888888876433322 21 1 11121 23567899999999888888888776665
No 386
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=27.58 E-value=1.9e+02 Score=23.43 Aligned_cols=54 Identities=11% Similarity=0.110 Sum_probs=35.1
Q ss_pred EEEecCCCcEE-EEEcCCCc-------cceee--eccccceeEEEEeCCCCEEEEecCCCeEEE
Q psy10662 48 IVSASTDSQLK-LWNINKPN-------CLRSF--VGHINDKNFVGLATDGDYVACGSENNSLYI 101 (221)
Q Consensus 48 l~s~~~d~~v~-~wd~~~~~-------~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i 101 (221)
++.|..+|.|. +....... .+..+ .....+|..+.++++..+|..++.++.++|
T Consensus 432 lFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 432 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 67888888875 33322211 11111 124567899999999999999988886665
No 387
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=26.54 E-value=2.6e+02 Score=22.69 Aligned_cols=54 Identities=11% Similarity=0.185 Sum_probs=0.0
Q ss_pred EEEecCCCcE-EEEEcCCCcccee---eeccccceeEEEEeCCC--CEEEEecCCCeEEE
Q psy10662 48 IVSASTDSQL-KLWNINKPNCLRS---FVGHINDKNFVGLATDG--DYVACGSENNSLYI 101 (221)
Q Consensus 48 l~s~~~d~~v-~~wd~~~~~~~~~---~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~i 101 (221)
++.|..+|.| ++-.......+.. ......+|..+.++++. .+|..++..+.+++
T Consensus 418 ~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 418 MFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
No 388
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=26.49 E-value=1.9e+02 Score=21.17 Aligned_cols=98 Identities=8% Similarity=0.032 Sum_probs=50.4
Q ss_pred EEEEeCCCeEEEEEecCCce----------eeEEEEec-cCceEEEEEecCCcEEEecCCCcEEEEEcCCC-cc------
Q psy10662 6 LAFGSADHCVHYYDLRNTKE----------ALAVFKGH-RKAVSYVKFLNKEDIVSASTDSQLKLWNINKP-NC------ 67 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~~~~----------~~~~~~~~-~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~-~~------ 67 (221)
.+.-..||.|+.|-....++ ....+..- ...|..++.. ..+.++...+|.|+.|-.... +.
T Consensus 119 ~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G-~~hs~alt~~G~v~~wG~n~~GqLG~~~~~ 197 (389)
T 3kci_A 119 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG-GAHSACVTAAGDLYTWGKGRYGRLGHSDSE 197 (389)
T ss_dssp EEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC-SSEEEEEETTSCEEEEECCGGGTTCSSSCC
T ss_pred EEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC-cCeEEEEeCCCeEEEeCCCCCCCcCCCCCc
Confidence 34446789999997542211 11111111 1245555543 344555667999999975331 10
Q ss_pred ----ceeeec-cccceeEEEEeCCCCEEEEecCCCeEEEEEC
Q psy10662 68 ----LRSFVG-HINDKNFVGLATDGDYVACGSENNSLYIYYK 104 (221)
Q Consensus 68 ----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~ 104 (221)
...+.. ....|..++......+.+.-..+|.|..|-.
T Consensus 198 ~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 198 DQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp CEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEEC
T ss_pred ccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeC
Confidence 001111 1224555555432345666678899999954
No 389
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=25.23 E-value=2.6e+02 Score=22.31 Aligned_cols=27 Identities=7% Similarity=0.118 Sum_probs=22.6
Q ss_pred ccceeEEEEcCCCcEEEEecCCCeEEE
Q psy10662 187 NEFVSAVCWRQLSRVLVAANSQGIIKI 213 (221)
Q Consensus 187 ~~~v~~~~~~~~~~~l~~~~~dg~i~i 213 (221)
..+|..+.++++...|+.++.++.+++
T Consensus 418 ~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 418 AAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp CCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred CCceeeEEEcCCCCEEEEEecceEEEc
Confidence 457899999999999999988876665
No 390
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=24.89 E-value=1.1e+02 Score=17.62 Aligned_cols=23 Identities=22% Similarity=0.385 Sum_probs=12.6
Q ss_pred EEEEeCCCCEEEEecCCCeEEEEEC
Q psy10662 80 FVGLATDGDYVACGSENNSLYIYYK 104 (221)
Q Consensus 80 ~~~~~~~~~~l~~~~~d~~v~iwd~ 104 (221)
.+.+..+|++++..... . .+|..
T Consensus 54 ~L~l~~dGnLvL~d~~~-~-~vWss 76 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDSSG-R-SLWAS 76 (105)
T ss_dssp EEEECTTSCEEEECTTC-C-EEEEC
T ss_pred EEEEeCCccEEEECCCc-E-EEEEe
Confidence 46677777766554332 2 35643
No 391
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=22.82 E-value=2.3e+02 Score=20.88 Aligned_cols=150 Identities=9% Similarity=0.039 Sum_probs=67.7
Q ss_pred EEEEeCCCeEEEEEecCCce----------eeEEEEe-ccCceEEEEEecCCcEEEecCCCcEEEEEcCCCcc-------
Q psy10662 6 LAFGSADHCVHYYDLRNTKE----------ALAVFKG-HRKAVSYVKFLNKEDIVSASTDSQLKLWNINKPNC------- 67 (221)
Q Consensus 6 l~~~~~dg~i~i~~~~~~~~----------~~~~~~~-~~~~i~~~~~~~~~~l~s~~~d~~v~~wd~~~~~~------- 67 (221)
.+.-..||.|+.|-....++ ....+.. ....|..++......++....++.|+.|-......
T Consensus 28 s~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~ 107 (406)
T 4d9s_A 28 SVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSS 107 (406)
T ss_dssp EEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCC
T ss_pred EEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCC
Confidence 34445688888887543221 1111111 12356666654433344444445899996432110
Q ss_pred -ce---eeec-cccceeEEEEeCCCCEEEEecCCCeEEEEECCCCeeeEEEEeecccceeEeeEEEe-eCceEEEEEecC
Q psy10662 68 -LR---SFVG-HINDKNFVGLATDGDYVACGSENNSLYIYYKGLSKHMHAYRFDTVRSMLESSFVGH-INDKNFVGLATD 141 (221)
Q Consensus 68 -~~---~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~ 141 (221)
.. .+.. ....|..++. ...+.+.-..+|.|..|-....-.+..- +.........+... ...|..++. .
T Consensus 108 ~~~~p~~v~~l~~~~i~~ia~--G~~h~~alt~~G~v~~wG~n~~GqLG~g--~~~~~~~p~~v~~~~~~~i~~va~--G 181 (406)
T 4d9s_A 108 DLFTPLPIKALHGIRIKQIAC--GDSHCLAVTMEGEVQSWGRNQNGQLGLG--DTEDSLVPQKIQAFEGIRIKMVAA--G 181 (406)
T ss_dssp CEEEEEECGGGTTCCEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTCSS--SCCCEEEEEECGGGTTCCEEEEEE--C
T ss_pred ccccceEecccCCCCEEEEEE--ChhheEEEcCCCcEEEeCCCCCccCCCC--CCCCcccceEecccCCCcEEEEec--C
Confidence 00 0111 1124555554 3445666678899999964321110000 00000000001100 113444443 3
Q ss_pred CCEEEEecCCCeEEEEEcCC
Q psy10662 142 GDYVACGSENNSLYIYYKGL 161 (221)
Q Consensus 142 ~~~l~~~~~d~~i~~~d~~~ 161 (221)
....++-..+|.|+.|-...
T Consensus 182 ~~hs~alt~~G~v~~wG~n~ 201 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWGR 201 (406)
T ss_dssp SSEEEEEETTSCEEEEECCT
T ss_pred CCeEEEEeCCCCEEEeeCCC
Confidence 34555667888999996543
No 392
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=22.02 E-value=26 Score=26.42 Aligned_cols=18 Identities=17% Similarity=0.614 Sum_probs=11.8
Q ss_pred EecCCCcEEEEEcCCCcc
Q psy10662 50 SASTDSQLKLWNINKPNC 67 (221)
Q Consensus 50 s~~~d~~v~~wd~~~~~~ 67 (221)
.+..+|.|++||++....
T Consensus 162 ~~~~~GVVrvWDVkd~sl 179 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAEL 179 (577)
T ss_dssp ----CCEECSEECSCGGG
T ss_pred CCCCCCeEEEEecCCHHH
Confidence 567799999999987543
Done!