Query psy10663
Match_columns 572
No_of_seqs 231 out of 1198
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 15:26:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10663.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10663hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 1.1E-98 4E-103 811.5 44.3 516 1-552 16-565 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 2.2E-93 7.4E-98 770.9 35.3 518 1-554 33-580 (583)
3 3q9t_A Choline dehydrogenase a 100.0 4.2E-92 1.4E-96 761.8 41.2 511 1-554 20-574 (577)
4 2jbv_A Choline oxidase; alcoho 100.0 1.9E-86 6.4E-91 718.8 47.9 508 1-568 27-544 (546)
5 1gpe_A Protein (glucose oxidas 100.0 7.4E-89 2.5E-93 742.6 28.9 516 1-554 38-584 (587)
6 3t37_A Probable dehydrogenase; 100.0 8.9E-85 3E-89 707.6 45.9 484 1-550 31-521 (526)
7 1ju2_A HydroxynitrIle lyase; f 100.0 7.4E-72 2.5E-76 603.3 32.4 462 1-552 40-516 (536)
8 1kdg_A CDH, cellobiose dehydro 100.0 3.1E-68 1.1E-72 578.9 32.7 478 1-555 21-545 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 2.9E-67 9.8E-72 564.5 26.7 441 1-554 19-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 6.7E-66 2.3E-70 553.9 25.4 440 1-553 25-505 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 2.2E-48 7.4E-53 425.9 27.3 419 67-562 157-622 (623)
12 4at0_A 3-ketosteroid-delta4-5a 98.4 5E-06 1.7E-10 88.7 15.5 65 197-263 207-272 (510)
13 1qo8_A Flavocytochrome C3 fuma 97.6 0.00028 9.7E-09 76.1 11.3 63 197-261 255-317 (566)
14 1d4d_A Flavocytochrome C fumar 95.8 0.013 4.6E-07 63.0 7.2 65 197-263 260-325 (572)
15 1y0p_A Fumarate reductase flav 95.4 0.019 6.4E-07 61.8 6.9 63 197-261 260-323 (571)
16 2h88_A Succinate dehydrogenase 95.3 0.036 1.2E-06 60.1 8.5 54 201-257 164-218 (621)
17 1kf6_A Fumarate reductase flav 94.9 0.057 2E-06 58.3 8.6 59 197-258 140-199 (602)
18 2rgh_A Alpha-glycerophosphate 94.7 0.051 1.7E-06 58.4 7.6 60 202-265 198-258 (571)
19 2wdq_A Succinate dehydrogenase 94.6 0.043 1.5E-06 59.2 6.7 53 203-257 154-207 (588)
20 3da1_A Glycerol-3-phosphate de 94.6 0.063 2.2E-06 57.5 8.0 61 202-266 180-241 (561)
21 2bs2_A Quinol-fumarate reducta 94.5 0.045 1.6E-06 59.7 6.7 53 202-257 168-221 (660)
22 4dgk_A Phytoene dehydrogenase; 94.2 0.038 1.3E-06 58.2 5.0 55 202-263 231-285 (501)
23 1chu_A Protein (L-aspartate ox 93.9 0.063 2.2E-06 57.2 6.1 55 202-257 149-209 (540)
24 3dme_A Conserved exported prot 93.8 0.059 2E-06 53.9 5.4 59 202-266 160-219 (369)
25 3dje_A Fructosyl amine: oxygen 93.4 0.067 2.3E-06 55.2 5.2 54 200-261 169-225 (438)
26 3e1t_A Halogenase; flavoprotei 93.1 0.14 4.7E-06 54.2 7.1 58 196-256 115-172 (512)
27 1rp0_A ARA6, thiazole biosynth 92.4 0.4 1.4E-05 46.2 8.9 53 199-254 127-189 (284)
28 1jnr_A Adenylylsulfate reducta 92.2 0.12 4.1E-06 56.3 5.3 51 206-257 166-219 (643)
29 3ka7_A Oxidoreductase; structu 91.9 0.15 5E-06 52.3 5.3 53 202-262 206-258 (425)
30 3gyx_A Adenylylsulfate reducta 91.8 0.12 4E-06 56.5 4.6 51 206-257 182-234 (662)
31 1y56_B Sarcosine oxidase; dehy 91.8 0.18 6.2E-06 50.7 5.7 55 202-265 159-213 (382)
32 3atr_A Conserved archaeal prot 91.4 0.28 9.5E-06 50.9 6.8 58 196-256 104-162 (453)
33 2i0z_A NAD(FAD)-utilizing dehy 91.3 0.28 9.7E-06 50.7 6.8 51 202-259 144-194 (447)
34 2qcu_A Aerobic glycerol-3-phos 90.9 0.32 1.1E-05 51.2 6.7 56 202-262 159-215 (501)
35 3axb_A Putative oxidoreductase 90.6 0.24 8.4E-06 51.1 5.4 57 202-265 191-262 (448)
36 3r9u_A Thioredoxin reductase; 90.2 0.5 1.7E-05 45.7 7.1 63 197-262 188-250 (315)
37 3f8d_A Thioredoxin reductase ( 90.2 0.78 2.7E-05 44.5 8.5 67 196-266 194-261 (323)
38 2gag_B Heterotetrameric sarcos 89.5 0.37 1.3E-05 48.8 5.7 55 202-265 184-238 (405)
39 3cgv_A Geranylgeranyl reductas 88.8 0.45 1.5E-05 47.9 5.7 57 196-256 106-162 (397)
40 1fl2_A Alkyl hydroperoxide red 88.2 0.79 2.7E-05 44.3 6.8 58 202-262 190-248 (310)
41 3nyc_A D-arginine dehydrogenas 88.1 0.49 1.7E-05 47.3 5.4 54 202-265 164-217 (381)
42 3cty_A Thioredoxin reductase; 87.5 0.6 2.1E-05 45.5 5.5 60 204-266 202-262 (319)
43 3fg2_P Putative rubredoxin red 87.5 0.72 2.5E-05 46.9 6.2 64 197-267 189-252 (404)
44 3itj_A Thioredoxin reductase 1 87.0 0.84 2.9E-05 44.6 6.3 62 197-261 214-276 (338)
45 3lxd_A FAD-dependent pyridine 87.0 0.72 2.5E-05 47.0 5.9 65 196-267 198-262 (415)
46 3jsk_A Cypbp37 protein; octame 86.3 1.5 5.3E-05 43.3 7.6 61 196-257 165-252 (344)
47 3nix_A Flavoprotein/dehydrogen 86.1 0.81 2.8E-05 46.5 5.8 56 196-255 110-165 (421)
48 1pj5_A N,N-dimethylglycine oxi 85.8 0.85 2.9E-05 51.2 6.2 56 202-266 161-216 (830)
49 3ab1_A Ferredoxin--NADP reduct 85.8 1.6 5.5E-05 43.3 7.6 61 202-265 212-272 (360)
50 1trb_A Thioredoxin reductase; 85.5 1.2 4.2E-05 43.1 6.5 57 202-261 194-252 (320)
51 2zxi_A TRNA uridine 5-carboxym 85.0 0.76 2.6E-05 49.4 5.0 50 203-260 135-184 (637)
52 2oln_A NIKD protein; flavoprot 84.8 1.4 4.6E-05 44.5 6.6 51 202-262 163-213 (397)
53 2cul_A Glucose-inhibited divis 84.0 2.2 7.7E-05 39.3 7.3 50 203-260 80-129 (232)
54 3nlc_A Uncharacterized protein 84.0 1.1 3.7E-05 47.6 5.6 49 202-257 230-278 (549)
55 2gjc_A Thiazole biosynthetic e 84.0 2.2 7.6E-05 41.8 7.4 58 197-254 152-237 (326)
56 1mo9_A ORF3; nucleotide bindin 84.0 1.4 4.7E-05 46.6 6.4 67 197-266 260-327 (523)
57 2gmh_A Electron transfer flavo 83.9 1.1 3.8E-05 48.0 5.7 61 196-258 148-219 (584)
58 2q0l_A TRXR, thioredoxin reduc 83.8 2 6.8E-05 41.4 7.1 65 197-264 184-249 (311)
59 2q7v_A Thioredoxin reductase; 83.5 1.8 6.2E-05 42.1 6.8 61 197-261 193-254 (325)
60 1vdc_A NTR, NADPH dependent th 83.1 2.3 8E-05 41.4 7.4 61 200-261 203-264 (333)
61 3ps9_A TRNA 5-methylaminomethy 83.0 0.99 3.4E-05 49.3 5.0 52 202-262 427-478 (676)
62 3i3l_A Alkylhalidase CMLS; fla 82.7 0.98 3.4E-05 48.5 4.7 55 196-254 132-186 (591)
63 3nrn_A Uncharacterized protein 82.6 1.2 4E-05 45.5 5.0 50 202-261 199-248 (421)
64 1hyu_A AHPF, alkyl hydroperoxi 82.3 2 6.9E-05 45.2 6.9 55 204-261 403-458 (521)
65 1ryi_A Glycine oxidase; flavop 82.2 0.86 2.9E-05 45.6 3.8 57 198-264 170-226 (382)
66 2e5v_A L-aspartate oxidase; ar 81.8 0.91 3.1E-05 47.3 3.9 48 203-257 130-177 (472)
67 3s5w_A L-ornithine 5-monooxyge 81.2 1.7 5.8E-05 44.8 5.8 61 196-259 131-193 (463)
68 3ces_A MNMG, tRNA uridine 5-ca 80.5 1.1 3.8E-05 48.2 4.1 49 203-259 136-184 (651)
69 3p1w_A Rabgdi protein; GDI RAB 80.2 1 3.5E-05 46.8 3.6 49 201-255 265-313 (475)
70 2uzz_A N-methyl-L-tryptophan o 78.6 1.7 5.7E-05 43.3 4.5 49 202-260 159-207 (372)
71 2bry_A NEDD9 interacting prote 78.6 0.77 2.6E-05 48.2 2.1 62 197-259 171-233 (497)
72 3v76_A Flavoprotein; structura 78.1 1.7 5.7E-05 44.4 4.4 55 197-260 137-191 (417)
73 2gf3_A MSOX, monomeric sarcosi 78.0 1.7 5.8E-05 43.4 4.4 50 202-261 160-209 (389)
74 2zbw_A Thioredoxin reductase; 77.7 3.1 0.00011 40.5 6.2 65 197-265 196-261 (335)
75 3oz2_A Digeranylgeranylglycero 77.7 2.6 8.8E-05 42.0 5.7 58 196-258 106-163 (397)
76 3pvc_A TRNA 5-methylaminomethy 77.6 1.5 5.1E-05 48.0 4.1 53 202-262 422-474 (689)
77 3iwa_A FAD-dependent pyridine 75.7 3.4 0.00011 42.8 6.0 62 197-266 207-268 (472)
78 3lzw_A Ferredoxin--NADP reduct 74.2 3.2 0.00011 40.2 5.2 60 203-266 200-260 (332)
79 3c4n_A Uncharacterized protein 74.1 1.5 5E-05 44.5 2.7 58 198-265 178-245 (405)
80 2ywl_A Thioredoxin reductase r 72.3 4.1 0.00014 35.6 4.9 59 196-266 60-118 (180)
81 4a9w_A Monooxygenase; baeyer-v 72.0 2.3 7.9E-05 41.6 3.5 58 196-261 80-137 (357)
82 3cp8_A TRNA uridine 5-carboxym 71.6 6.3 0.00022 42.4 6.9 49 202-258 128-176 (641)
83 3s5w_A L-ornithine 5-monooxyge 70.7 5.6 0.00019 40.8 6.3 51 203-257 327-378 (463)
84 2qae_A Lipoamide, dihydrolipoy 70.1 5.9 0.0002 40.8 6.3 66 197-266 220-288 (468)
85 3ef6_A Toluene 1,2-dioxygenase 70.0 2.4 8.1E-05 43.0 3.1 62 197-266 190-251 (410)
86 1q1r_A Putidaredoxin reductase 69.9 3.8 0.00013 41.9 4.7 64 198-266 197-260 (431)
87 2bcg_G Secretory pathway GDP d 69.6 3.7 0.00013 42.3 4.5 48 202-255 252-299 (453)
88 2x3n_A Probable FAD-dependent 69.0 5.4 0.00019 40.0 5.6 54 197-257 112-167 (399)
89 1m6i_A Programmed cell death p 68.8 6 0.0002 41.2 6.0 62 197-266 231-292 (493)
90 2qa1_A PGAE, polyketide oxygen 68.6 6.3 0.00022 41.1 6.1 57 196-257 110-166 (500)
91 1vg0_A RAB proteins geranylger 68.1 6.2 0.00021 42.5 5.9 49 200-253 386-434 (650)
92 2qa2_A CABE, polyketide oxygen 67.7 6.8 0.00023 40.9 6.1 56 196-256 111-166 (499)
93 2xve_A Flavin-containing monoo 66.9 3.9 0.00013 42.3 4.0 64 196-261 105-171 (464)
94 2gqf_A Hypothetical protein HI 66.8 4.5 0.00015 40.9 4.4 56 197-259 114-171 (401)
95 4b63_A L-ornithine N5 monooxyg 65.8 5.7 0.00019 41.5 5.1 59 195-254 148-212 (501)
96 3ihg_A RDME; flavoenzyme, anth 65.0 7.5 0.00026 40.9 5.9 58 196-256 124-183 (535)
97 2v3a_A Rubredoxin reductase; a 64.4 8.5 0.00029 38.4 5.9 62 197-266 192-253 (384)
98 3ic9_A Dihydrolipoamide dehydr 64.3 8.3 0.00028 40.1 6.0 53 203-260 226-278 (492)
99 2weu_A Tryptophan 5-halogenase 63.8 6.6 0.00023 40.9 5.2 52 196-254 177-228 (511)
100 3urh_A Dihydrolipoyl dehydroge 63.7 8.5 0.00029 39.9 6.0 65 198-266 245-312 (491)
101 2eq6_A Pyruvate dehydrogenase 63.2 11 0.00037 38.8 6.6 66 197-266 215-283 (464)
102 3hyw_A Sulfide-quinone reducta 62.6 8.4 0.00029 39.2 5.6 61 196-265 204-264 (430)
103 1d5t_A Guanine nucleotide diss 61.8 3.5 0.00012 42.2 2.5 45 203-255 245-289 (433)
104 2a87_A TRXR, TR, thioredoxin r 60.0 5.1 0.00018 39.0 3.3 55 203-261 202-257 (335)
105 3dgh_A TRXR-1, thioredoxin red 59.7 8.2 0.00028 39.9 5.0 62 197-261 232-294 (483)
106 2gv8_A Monooxygenase; FMO, FAD 59.3 8 0.00027 39.5 4.7 62 196-261 119-182 (447)
107 3gwf_A Cyclohexanone monooxyge 59.2 5.3 0.00018 42.2 3.4 60 196-261 91-152 (540)
108 2hqm_A GR, grase, glutathione 58.6 5.2 0.00018 41.4 3.2 65 197-266 231-296 (479)
109 2e4g_A Tryptophan halogenase; 58.3 7.1 0.00024 41.2 4.2 52 196-254 198-250 (550)
110 3lad_A Dihydrolipoamide dehydr 58.2 7.7 0.00026 40.0 4.4 59 198-261 227-285 (476)
111 2dkh_A 3-hydroxybenzoate hydro 58.0 11 0.00036 40.8 5.6 53 206-259 157-214 (639)
112 1k0i_A P-hydroxybenzoate hydro 57.6 7.5 0.00026 38.8 4.1 50 204-257 115-164 (394)
113 1sez_A Protoporphyrinogen oxid 57.1 5.9 0.0002 41.2 3.3 54 207-261 256-313 (504)
114 2aqj_A Tryptophan halogenase, 56.5 9.8 0.00034 40.0 4.9 53 196-255 169-221 (538)
115 3dgz_A Thioredoxin reductase 2 54.7 13 0.00043 38.6 5.3 62 197-261 230-292 (488)
116 4ap3_A Steroid monooxygenase; 54.4 6.8 0.00023 41.4 3.2 61 196-262 103-165 (549)
117 4dna_A Probable glutathione re 54.4 6 0.00021 40.7 2.8 63 197-266 216-280 (463)
118 3nks_A Protoporphyrinogen oxid 54.1 5.3 0.00018 41.1 2.3 52 202-261 244-295 (477)
119 1fec_A Trypanothione reductase 53.6 8.7 0.0003 39.9 3.9 63 197-266 236-300 (490)
120 2pyx_A Tryptophan halogenase; 53.5 13 0.00043 39.0 5.2 52 196-254 179-231 (526)
121 1zmd_A Dihydrolipoyl dehydroge 53.4 14 0.00047 38.1 5.3 67 197-266 225-294 (474)
122 2wpf_A Trypanothione reductase 53.3 9.5 0.00032 39.7 4.1 56 197-259 240-295 (495)
123 3d1c_A Flavin-containing putat 52.6 8.2 0.00028 37.9 3.4 54 196-258 92-145 (369)
124 2cdu_A NADPH oxidase; flavoenz 52.1 11 0.00037 38.6 4.3 57 197-261 196-252 (452)
125 2a8x_A Dihydrolipoyl dehydroge 52.0 14 0.00049 37.8 5.2 65 197-266 217-283 (464)
126 3qj4_A Renalase; FAD/NAD(P)-bi 52.0 6.9 0.00023 38.2 2.6 48 206-261 123-170 (342)
127 1dxl_A Dihydrolipoamide dehydr 51.9 8.9 0.00031 39.4 3.6 61 197-261 223-284 (470)
128 3k7m_X 6-hydroxy-L-nicotine ox 51.7 12 0.00042 37.7 4.6 49 197-254 209-257 (431)
129 3dk9_A Grase, GR, glutathione 51.6 18 0.00061 37.2 5.9 68 197-266 233-305 (478)
130 2vvm_A Monoamine oxidase N; FA 51.1 20 0.00069 36.9 6.2 48 204-259 268-315 (495)
131 3fmw_A Oxygenase; mithramycin, 51.0 7.2 0.00025 41.5 2.8 56 196-256 152-207 (570)
132 1ojt_A Surface protein; redox- 50.8 17 0.00057 37.6 5.5 61 197-261 231-291 (482)
133 1v59_A Dihydrolipoamide dehydr 50.7 12 0.00041 38.5 4.4 61 197-259 229-290 (478)
134 1yvv_A Amine oxidase, flavin-c 50.7 16 0.00055 35.2 5.1 49 206-261 119-167 (336)
135 2gqw_A Ferredoxin reductase; f 50.6 13 0.00044 37.4 4.5 58 197-266 192-249 (408)
136 3cgb_A Pyridine nucleotide-dis 49.2 15 0.00051 37.9 4.8 60 198-266 233-292 (480)
137 2r9z_A Glutathione amide reduc 48.2 18 0.00062 37.1 5.3 63 197-266 212-276 (463)
138 1w4x_A Phenylacetone monooxyge 48.2 12 0.0004 39.5 3.8 60 196-261 98-159 (542)
139 3oc4_A Oxidoreductase, pyridin 48.1 14 0.00048 37.7 4.4 56 197-261 194-249 (452)
140 3kkj_A Amine oxidase, flavin-c 48.0 3.9 0.00013 37.7 0.0 21 1-22 16-36 (336)
141 3uox_A Otemo; baeyer-villiger 47.2 8.9 0.0003 40.5 2.7 61 196-262 91-153 (545)
142 1ebd_A E3BD, dihydrolipoamide 47.0 18 0.00062 36.9 5.0 59 197-260 216-274 (455)
143 3o0h_A Glutathione reductase; 47.0 12 0.00042 38.6 3.7 61 198-266 238-300 (484)
144 4dgk_A Phytoene dehydrogenase; 46.2 3.9 0.00013 42.5 -0.3 43 510-556 452-494 (501)
145 1xdi_A RV3303C-LPDA; reductase 46.2 12 0.00042 38.8 3.6 56 197-260 228-283 (499)
146 3l8k_A Dihydrolipoyl dehydroge 46.1 16 0.00055 37.5 4.5 57 207-266 226-283 (466)
147 1fl2_A Alkyl hydroperoxide red 44.9 21 0.0007 34.0 4.8 55 196-255 60-114 (310)
148 3i6d_A Protoporphyrinogen oxid 44.7 32 0.0011 34.8 6.6 47 207-261 248-294 (470)
149 3lzw_A Ferredoxin--NADP reduct 44.6 21 0.00073 34.1 4.9 59 195-261 70-129 (332)
150 1ges_A Glutathione reductase; 44.4 13 0.00045 38.0 3.4 63 197-266 213-277 (450)
151 2ivd_A PPO, PPOX, protoporphyr 44.4 11 0.00039 38.6 3.0 50 206-261 249-299 (478)
152 3h28_A Sulfide-quinone reducta 43.4 23 0.00078 35.8 5.1 55 196-258 204-258 (430)
153 3lov_A Protoporphyrinogen oxid 43.3 17 0.00058 37.2 4.1 46 207-261 249-294 (475)
154 2zbw_A Thioredoxin reductase; 43.1 30 0.001 33.2 5.8 58 196-261 69-127 (335)
155 2r0c_A REBC; flavin adenine di 42.5 38 0.0013 35.5 6.8 47 209-259 152-199 (549)
156 2b9w_A Putative aminooxidase; 42.0 8.9 0.0003 38.7 1.7 43 206-257 217-259 (424)
157 1gte_A Dihydropyrimidine dehyd 41.1 40 0.0014 38.6 7.0 61 203-266 381-454 (1025)
158 3ntd_A FAD-dependent pyridine 41.0 33 0.0011 36.0 6.0 64 197-266 197-277 (565)
159 1b37_A Protein (polyamine oxid 39.9 23 0.00078 36.3 4.5 41 206-254 228-268 (472)
160 1onf_A GR, grase, glutathione 39.6 17 0.00058 37.8 3.4 57 197-259 222-278 (500)
161 3ics_A Coenzyme A-disulfide re 39.2 23 0.00077 37.6 4.4 60 197-266 233-292 (588)
162 2jae_A L-amino acid oxidase; o 38.9 37 0.0013 34.8 5.9 44 207-255 252-295 (489)
163 1y56_A Hypothetical protein PH 38.9 21 0.00073 36.9 4.0 56 203-266 268-323 (493)
164 4g6h_A Rotenone-insensitive NA 38.5 19 0.00066 37.4 3.6 57 197-259 277-335 (502)
165 4g6h_A Rotenone-insensitive NA 37.0 22 0.00075 37.0 3.7 44 505-551 354-398 (502)
166 3ab1_A Ferredoxin--NADP reduct 36.7 38 0.0013 33.0 5.3 59 196-261 78-137 (360)
167 3rp8_A Flavoprotein monooxygen 36.7 42 0.0014 33.4 5.8 54 196-259 131-184 (407)
168 3p1w_A Rabgdi protein; GDI RAB 35.6 7.9 0.00027 40.0 0.0 21 2-23 35-55 (475)
169 3ka7_A Oxidoreductase; structu 34.9 8.5 0.00029 38.8 0.2 36 513-550 389-424 (425)
170 2gag_A Heterotetrameric sarcos 34.9 40 0.0014 38.3 5.7 61 203-265 327-392 (965)
171 3h8l_A NADH oxidase; membrane 34.8 41 0.0014 33.5 5.3 49 199-254 63-111 (409)
172 2bcg_G Secretory pathway GDP d 34.8 8.3 0.00028 39.6 0.0 22 1-23 25-46 (453)
173 3k30_A Histamine dehydrogenase 34.5 29 0.00098 37.7 4.3 57 200-263 575-631 (690)
174 1xhc_A NADH oxidase /nitrite r 34.3 18 0.0006 35.9 2.4 57 197-266 188-244 (367)
175 4gde_A UDP-galactopyranose mut 34.0 7.2 0.00025 40.5 -0.6 50 202-261 232-281 (513)
176 3oz2_A Digeranylgeranylglycero 33.9 8.8 0.0003 37.9 0.1 22 1-23 18-39 (397)
177 4at0_A 3-ketosteroid-delta4-5a 33.7 29 0.00099 36.1 4.0 61 487-552 445-509 (510)
178 1hyu_A AHPF, alkyl hydroperoxi 32.7 38 0.0013 35.2 4.8 54 196-254 271-324 (521)
179 2bc0_A NADH oxidase; flavoprot 32.0 28 0.00095 35.9 3.6 56 197-261 241-296 (490)
180 2iid_A L-amino-acid oxidase; f 32.0 46 0.0016 34.1 5.3 44 208-255 254-297 (498)
181 3nrn_A Uncharacterized protein 31.8 10 0.00035 38.2 0.2 32 516-549 372-403 (421)
182 3qfa_A Thioredoxin reductase 1 31.7 40 0.0014 35.1 4.8 63 197-260 255-319 (519)
183 3dme_A Conserved exported prot 31.6 9.4 0.00032 37.3 -0.2 32 514-551 338-369 (369)
184 3k7m_X 6-hydroxy-L-nicotine ox 31.6 9.8 0.00033 38.4 -0.1 21 1-22 15-35 (431)
185 2q0l_A TRXR, thioredoxin reduc 31.3 65 0.0022 30.3 5.9 50 196-254 63-112 (311)
186 2yqu_A 2-oxoglutarate dehydrog 31.1 38 0.0013 34.4 4.4 55 198-260 214-268 (455)
187 2oln_A NIKD protein; flavoprot 30.3 9.8 0.00034 37.9 -0.3 30 515-552 345-374 (397)
188 3iwa_A FAD-dependent pyridine 30.0 44 0.0015 34.1 4.7 47 202-254 76-123 (472)
189 1nhp_A NADH peroxidase; oxidor 29.5 38 0.0013 34.4 4.0 56 197-261 196-251 (447)
190 2yg5_A Putrescine oxidase; oxi 29.4 37 0.0012 34.4 3.9 47 206-260 226-272 (453)
191 3alj_A 2-methyl-3-hydroxypyrid 29.2 53 0.0018 32.2 5.0 53 196-259 111-163 (379)
192 3cgb_A Pyridine nucleotide-dis 29.1 54 0.0018 33.6 5.2 46 203-254 104-150 (480)
193 1i8t_A UDP-galactopyranose mut 29.0 13 0.00043 37.0 0.3 22 1-23 15-36 (367)
194 2vdc_G Glutamate synthase [NAD 28.8 20 0.00068 36.8 1.7 49 204-256 314-378 (456)
195 3uox_A Otemo; baeyer-villiger 28.6 42 0.0014 35.2 4.2 47 194-254 341-389 (545)
196 1s3e_A Amine oxidase [flavin-c 28.5 29 0.00099 36.0 3.0 47 206-260 226-272 (520)
197 1lvl_A Dihydrolipoamide dehydr 28.0 27 0.00091 35.7 2.5 57 197-261 217-273 (458)
198 3ntd_A FAD-dependent pyridine 27.4 31 0.0011 36.2 3.1 51 203-261 69-120 (565)
199 3f8d_A Thioredoxin reductase ( 27.1 65 0.0022 30.3 5.1 51 196-255 74-124 (323)
200 3hyw_A Sulfide-quinone reducta 27.0 51 0.0017 33.2 4.4 52 504-555 275-334 (430)
201 2x8g_A Thioredoxin glutathione 26.8 83 0.0028 33.2 6.3 63 197-261 331-400 (598)
202 2uzz_A N-methyl-L-tryptophan o 26.6 13 0.00045 36.5 -0.1 37 511-553 322-358 (372)
203 1ps9_A 2,4-dienoyl-COA reducta 26.4 41 0.0014 36.3 3.8 51 202-261 583-633 (671)
204 3ics_A Coenzyme A-disulfide re 26.3 41 0.0014 35.5 3.8 52 202-261 103-155 (588)
205 3dje_A Fructosyl amine: oxygen 26.3 13 0.00044 37.7 -0.3 55 488-553 331-385 (438)
206 2z3y_A Lysine-specific histone 26.2 90 0.0031 33.5 6.5 44 206-253 410-455 (662)
207 1zk7_A HGII, reductase, mercur 25.8 47 0.0016 33.9 4.0 55 197-260 221-275 (467)
208 3c96_A Flavin-containing monoo 25.7 1.1E+02 0.0036 30.4 6.6 53 205-262 122-175 (410)
209 1c0p_A D-amino acid oxidase; a 25.3 15 0.0005 36.1 -0.1 32 516-553 327-358 (363)
210 1v0j_A UDP-galactopyranose mut 24.7 13 0.00045 37.3 -0.5 23 1-23 21-43 (399)
211 1cjc_A Protein (adrenodoxin re 24.7 64 0.0022 32.9 4.7 52 205-258 270-335 (460)
212 3fpz_A Thiazole biosynthetic e 24.3 17 0.0006 35.1 0.3 21 2-22 80-101 (326)
213 2gf3_A MSOX, monomeric sarcosi 24.2 16 0.00054 36.2 -0.1 35 512-552 330-364 (389)
214 1lqt_A FPRA; NADP+ derivative, 24.0 49 0.0017 33.7 3.7 50 205-258 265-328 (456)
215 2vou_A 2,6-dihydroxypyridine h 23.9 92 0.0032 30.7 5.7 51 205-263 110-160 (397)
216 1nhp_A NADH peroxidase; oxidor 23.8 85 0.0029 31.6 5.5 45 204-254 68-113 (447)
217 1rsg_A FMS1 protein; FAD bindi 23.7 50 0.0017 34.2 3.7 40 207-253 215-254 (516)
218 3d1c_A Flavin-containing putat 23.6 1.1E+02 0.0036 29.6 6.0 62 197-265 219-281 (369)
219 1ryi_A Glycine oxidase; flavop 23.5 16 0.00055 36.0 -0.2 35 513-553 329-363 (382)
220 4eqs_A Coenzyme A disulfide re 23.2 70 0.0024 32.3 4.6 46 204-254 69-114 (437)
221 3sx6_A Sulfide-quinone reducta 22.5 1.1E+02 0.0036 30.8 5.8 65 196-266 212-279 (437)
222 2xag_A Lysine-specific histone 22.1 1.3E+02 0.0043 33.5 6.7 44 206-253 581-626 (852)
223 1y0p_A Fumarate reductase flav 22.1 45 0.0015 35.1 3.0 61 487-552 503-567 (571)
224 3nyc_A D-arginine dehydrogenas 21.5 24 0.00084 34.5 0.7 56 487-553 304-359 (381)
225 3kd9_A Coenzyme A disulfide re 21.1 80 0.0027 31.9 4.6 60 197-266 195-254 (449)
226 3nks_A Protoporphyrinogen oxid 21.1 24 0.00082 36.0 0.6 32 516-552 442-473 (477)
227 1y56_B Sarcosine oxidase; dehy 21.1 19 0.00064 35.5 -0.3 55 488-553 302-356 (382)
228 4a5l_A Thioredoxin reductase; 20.9 2E+02 0.0069 26.7 7.3 58 201-261 197-255 (314)
229 1yvv_A Amine oxidase, flavin-c 20.7 20 0.00068 34.5 -0.2 20 2-22 17-36 (336)
230 2xdo_A TETX2 protein; tetracyc 20.5 97 0.0033 30.6 5.0 42 206-255 140-181 (398)
231 1rp0_A ARA6, thiazole biosynth 20.1 31 0.0011 32.6 1.1 22 2-23 54-75 (284)
232 4fk1_A Putative thioredoxin re 20.0 49 0.0017 31.3 2.6 57 202-266 190-246 (304)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=1.1e-98 Score=811.47 Aligned_cols=516 Identities=23% Similarity=0.353 Sum_probs=437.4
Q ss_pred CccccccCCCCCeEEEEcccCCC--CCCccccccchhhhcCCCccceeeeecCCCcCCCCCCceeeeecCcccchhhhhc
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDA--PISTAIPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVVRLNQARVLGGSSIIN 78 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~--~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~~n 78 (572)
|+|.||||+++.+|||||+|+.. .+...+|..+.....++.++|.|.++||. +++++.+.++|||+|||||.||
T Consensus 16 v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~----~~~~r~~~~~rGk~lGGsS~iN 91 (566)
T 3fim_B 16 VVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQA----GYNGRSIAYPRGRMLGGSSSVH 91 (566)
T ss_dssp HHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCG----GGTTCCCBCCCBCBTTGGGGTS
T ss_pred HHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCC----CCCCceEeccCCcEEcCccccc
Confidence 58999999889999999999876 34456777665523347899999999998 4788999999999999999999
Q ss_pred cceeccCChhhHHHHHhc-CCCCCChhhHHHHHHHhhcCCCCCccc----ccCCCcccccCCCcEEEEccCCccChHHHH
Q psy10663 79 DMIHDRGSQYDYERWEGL-NMTGWTYSDMDAIYTRIERTKLDTVRT----ETESETVTVDNDGTVTITTIKTEKINLLRS 153 (572)
Q Consensus 79 ~~~~~r~~~~df~~w~~~-g~~~W~~~~l~pyy~~~e~~~~~~~~~----~~~~~~~~~g~~Gp~~~~~~~~~~~~~~~~ 153 (572)
+|+|.|+++.||+.|++. |+++|+|++|.|||+|+|++..+.... ..++. .||.+||++++.+.+ ..+ ...
T Consensus 92 ~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~--~hG~~Gp~~v~~~~~-~~~-~~~ 167 (566)
T 3fim_B 92 YMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPA--VHGTNGSVSISLPGF-PTP-LDD 167 (566)
T ss_dssp CCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGG--GSCBSSSEEEBSCSS-CCT-HHH
T ss_pred ceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCcc--ccCCCCCeeeecCCC-CCH-HHH
Confidence 999999999999999997 999999999999999999998542210 01234 899999999999887 778 999
Q ss_pred HHHHHHHHc--CCCCC-CCCCCCCcceeeccccccCCCeecchhHHhHhhhcCCCCeEEeccceEEEEEEeC--CC-CEE
Q psy10663 154 TFSKAFEDI--GFKSP-DTFTVSDHVGIAPPMYYLKDGQRMIASSIFLRAIKDKNTVQVSKNSEVTKLCFDE--TK-TKV 227 (572)
Q Consensus 154 ~~~~a~~~~--G~~~~-~~~~~~~~~g~~~~~~~~~~g~r~s~~~~yl~~~~~~~nl~i~~~~~V~~i~~~~--~~-~~a 227 (572)
.|.++++++ |++.. |+ |++...|++.++.++.+|.|+++..+||.++.+++||+|++++.|+||++++ ++ ++|
T Consensus 168 ~~~~a~~~~~~G~~~~~d~-n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA 246 (566)
T 3fim_B 168 RVLATTQEQSEEFFFNPDM-GTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAF 246 (566)
T ss_dssp HHHHHHHHTHHHHCBCSCG-GGSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEEC
T ss_pred HHHHHHHHHhcCCCccCCC-CCCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEE
Confidence 999999999 99987 66 8888899999999999999999999999998899999999999999999981 23 699
Q ss_pred EEEEEEcCCC-ceeEeeccceeEeccCcchhhHHHHHcCCCChHHHhhcCCCceecCcccCccccCCcccccEEEEeeCC
Q psy10663 228 TGVEFRNPQG-KTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKT 306 (572)
Q Consensus 228 ~gV~~~~~~g-~~~~v~A~k~VILaAGai~Tp~LLl~SgIG~~~~l~~~Gi~~~~~lp~VG~nl~dH~~~~~~~~~~~~~ 306 (572)
+||++.+.+| +.++|+|+||||||||||+||+|||+|||||+++|+++||+++.|||+||+|||||+.+. +.|..+.+
T Consensus 247 ~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~~-~~~~~~~~ 325 (566)
T 3fim_B 247 RCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLLP-AAFFVNSN 325 (566)
T ss_dssp CEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEEC-CEEEESCS
T ss_pred EEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccce-EEEEeCCC
Confidence 9999996556 889999988999999999999999999999999999999999999999999999999984 88887655
Q ss_pred CC-C----c-cchHHHHHHHHHcCCCccccCCcccEEEEEeCCC--------------CCCCCeeEEeeccCCCchhhhh
Q psy10663 307 PV-S----S-YTINEIIYEYLTQRTGRFTDIGMSNFIGYLDTDF--------------KGNPDVAVTQYYFPAQDTLFLR 366 (572)
Q Consensus 307 ~~-~----~-~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~ 366 (572)
.. . . ........+|...++||++..+ .+..+|.+... ...|++++++.+....
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~~~~~------ 398 (566)
T 3fim_B 326 QTFDNIFRDSSEFNVDLDQWTNTRTGPLTALI-ANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSNQWFH------ 398 (566)
T ss_dssp CSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCS-CSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEEESSCCC------
T ss_pred cccchhhcChHHHHHHHHHHHhcCCCCcccCh-hhheeeeccccchhhhhhhccccccCCCCCEEEEecccchh------
Confidence 31 1 1 1123456789989999998765 46778887642 1257777655432200
Q ss_pred hhhccccCchhHHHHHhhcCCCCCeEEEEEEecccCcceEEEecCCCCCCCCeeeCCCCCCHHHHHHHHHHHHHHHHHhc
Q psy10663 367 GHLKAWNVNDDLVERFVKVNADKPILIIGLVSLCPKAEGVVEINSNDPTKNPTIRYPLYTEEEDIKNILTAVKMVDRVMK 446 (572)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~ 446 (572)
. ..........+++...+++|.|||+|+|+|+||++.|.|+++|+.++.|++.++++++.++++++
T Consensus 399 ---------~-----~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~ 464 (566)
T 3fim_B 399 ---------P-----AIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLS 464 (566)
T ss_dssp ---------T-----TSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHT
T ss_pred ---------h-----cccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHh
Confidence 0 00011123567788889999999999999999999999999999999999999999999999999
Q ss_pred CccccccccccccccccccccCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCceEecccCC
Q psy10663 447 YRDFKNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVI 526 (572)
Q Consensus 447 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D~Sv~ 526 (572)
+++++.+...+.. |++ ....+|++|++|+|+...+.+|++||||||++++.++|||++|||||++||||||+|||
T Consensus 465 ~~~~~~~~~~~~~---P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvDaSv~ 539 (566)
T 3fim_B 465 GQAWADFVIRPFD---PRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSIL 539 (566)
T ss_dssp SGGGTTTEEEESS---GGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECSGGGC
T ss_pred CcccCCccccccC---CCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcccccC
Confidence 9989887654432 321 34678999999999999999999999999986654499999999999999999999999
Q ss_pred CCCCCcchHHHHHHHHHHHHHHhhCC
Q psy10663 527 PVEMVTDSSAVALMLAERCATFIQSP 552 (572)
Q Consensus 527 P~~~~~NP~lTi~AlA~r~ad~I~~~ 552 (572)
|+++++||++|+||||||+||+|+++
T Consensus 540 P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 540 PFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp CSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999865
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=2.2e-93 Score=770.92 Aligned_cols=518 Identities=21% Similarity=0.257 Sum_probs=403.9
Q ss_pred CccccccCCCCCeEEEEcccCCCC---CCccccccchhhhcCCCccceeeeecCCCcCCCCCCceeeeecCcccchhhhh
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDAP---ISTAIPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVVRLNQARVLGGSSII 77 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~~---~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~~ 77 (572)
|+|.||||+++.+|||||||++.. +....|..+.. +.++.++|.|.++||. ..++.+.++|||+|||||.+
T Consensus 33 vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~-~~~~~~~w~~~t~~q~-----~~~r~~~~~rGk~LGGsS~i 106 (583)
T 3qvp_A 33 TTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGD-IFGSSVDHAYETVELA-----TNNQTALIRSGNGLGGSTLV 106 (583)
T ss_dssp HHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTT-TTTSTTBCCEECCCCT-----TTSCCCEECCBCSTTGGGGT
T ss_pred HHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHh-hcCCcccCCccccccC-----CCCCeeeccCceecCCcCcc
Confidence 589999998899999999999432 23445665555 5577899999999886 46788999999999999999
Q ss_pred ccceeccCChhhHHHHHhcCCC-CCChhhHHHHHHHhhcCCCCCccc-----ccCCCcccccCCCcEEEEcc---CCccC
Q psy10663 78 NDMIHDRGSQYDYERWEGLNMT-GWTYSDMDAIYTRIERTKLDTVRT-----ETESETVTVDNDGTVTITTI---KTEKI 148 (572)
Q Consensus 78 n~~~~~r~~~~df~~w~~~g~~-~W~~~~l~pyy~~~e~~~~~~~~~-----~~~~~~~~~g~~Gp~~~~~~---~~~~~ 148 (572)
|+|+|.|+++.||+.|++.|++ +|+|+++.|||+|+|++..+.... ..+.. .||.+||+.++++ .. ..
T Consensus 107 N~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~--~hG~~Gpl~v~~~~~~~~-~~ 183 (583)
T 3qvp_A 107 NGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNAS--CHGVNGTVHAGPRDTGDD-YS 183 (583)
T ss_dssp SCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGG--GSCSSSSEEEBCCCCSSC-BC
T ss_pred cceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCcc--ccCCCCCEEecCCCCccc-CC
Confidence 9999999999999999999887 999999999999999997543110 01234 8999999999876 22 46
Q ss_pred hHHHHHHHHHHHHcCCCCC-CCCCCCCcceeeccccccC-CCeecchhHHhHhhhcCCCCeEEeccceEEEEEEeCC--C
Q psy10663 149 NLLRSTFSKAFEDIGFKSP-DTFTVSDHVGIAPPMYYLK-DGQRMIASSIFLRAIKDKNTVQVSKNSEVTKLCFDET--K 224 (572)
Q Consensus 149 ~~~~~~~~~a~~~~G~~~~-~~~~~~~~~g~~~~~~~~~-~g~r~s~~~~yl~~~~~~~nl~i~~~~~V~~i~~~~~--~ 224 (572)
+ ..+.|.++++++|++.. |+ |++.+.|++.++.++. +|.|+|+..+||.++.+++||+|+++++|+||+++++ +
T Consensus 184 ~-~~~~~~~a~~~~G~~~~~D~-n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~ 261 (583)
T 3qvp_A 184 P-IVKALMSAVEDRGVPTKKDF-GCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTT 261 (583)
T ss_dssp T-HHHHHHHHHHTTTCCBCCCT-TSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSS
T ss_pred H-HHHHHHHHHHHcCCCcCCCC-CCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCC
Confidence 7 88999999999999987 77 8888999999888775 7999999999999988999999999999999999852 5
Q ss_pred CEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCCCChHHHhhcCCCceecCcccCccccCCcccccEEEEee
Q psy10663 225 TKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFT 304 (572)
Q Consensus 225 ~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgIG~~~~l~~~Gi~~~~~lp~VG~nl~dH~~~~~~~~~~~ 304 (572)
++|+||++.+.+|+.++|+|+||||||||+|+||+|||+|||||+++|+++||+++.||| ||+|||||+.+. +.|.++
T Consensus 262 ~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG~NLqDH~~~~-~~~~~~ 339 (583)
T 3qvp_A 262 PRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VGLNLQDQTTAT-VRSRIT 339 (583)
T ss_dssp CEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TTCCBBCCEEEE-EEEEEC
T ss_pred CEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-cccchhhCccce-EEEEec
Confidence 799999999668999999999999999999999999999999999999999999999999 999999999984 888876
Q ss_pred CCCC--------Cccc-----hHHHHHHHHHcCCCccccCCcccEEEEEeCCCCCCCCeeEEeeccCCCchhhhhhhhcc
Q psy10663 305 KTPV--------SSYT-----INEIIYEYLTQRTGRFTDIGMSNFIGYLDTDFKGNPDVAVTQYYFPAQDTLFLRGHLKA 371 (572)
Q Consensus 305 ~~~~--------~~~~-----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (572)
.... .... ......+|.....+++.... .+...|.+. ++++..+.... + ..+...
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~--~----~~~~~~ 407 (583)
T 3qvp_A 340 SAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQWAEEA-VARGGFHNT-----TALLIQYENYR--D----WIVNHN 407 (583)
T ss_dssp GGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHHHHHHH-HHTTSCSCH-----HHHHHHHHHHH--H----HHHHSC
T ss_pred CCccccccccccccHHHhhccchHHHHHHHHhhcchhhccc-ccccCcccc-----HHHHhhhccch--h----hhccCC
Confidence 4310 0000 01111222222212111100 000000000 00000000000 0 000000
Q ss_pred ccCchhHHHHHhhcCCCCCeEEEEEEecccCcceEEEecCCCCCCCCee-eCCCCCCHHHHHHHHHHHHHHHHHhcCccc
Q psy10663 372 WNVNDDLVERFVKVNADKPILIIGLVSLCPKAEGVVEINSNDPTKNPTI-RYPLYTEEEDIKNILTAVKMVDRVMKYRDF 450 (572)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~P~i-~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~ 450 (572)
..+. +.+. . ....+.+..+.++|.|||+|+|+|+||++.|.| +++|+.++.|++.++++++.+++|+++.++
T Consensus 408 ~~~~----~~~~-~--~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~ 480 (583)
T 3qvp_A 408 VAYS----ELFL-D--TAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAM 480 (583)
T ss_dssp CEEE----EEEE-E--CTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTSTTH
T ss_pred CCcc----eeee-c--cCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhCcch
Confidence 0000 0000 0 011234445568999999999999999999999 999999999999999999999999999888
Q ss_pred cccccccccccccccccCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCceEecccCCCCCC
Q psy10663 451 KNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVEM 530 (572)
Q Consensus 451 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D~Sv~P~~~ 530 (572)
+.+...+. .|++......+|++|++|+|....+.+|++||||||++++ ++|||++|||||++||||||+||||+++
T Consensus 481 ~~~~~~~~---~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv~~LrVvDaSv~P~~~ 556 (583)
T 3qvp_A 481 QTYFAGET---IPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEM-GGVVDNAARVYGVQGLRVIDGSIPPTQM 556 (583)
T ss_dssp HHHEEEEE---ESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTCBSEEECSTTCCSSCC
T ss_pred hhcccccc---CCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCC-CceECCCCeEecCCCeEEeecccCCCCC
Confidence 88765443 4555444557899999999999999999999999998654 6999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHhhCCCC
Q psy10663 531 VTDSSAVALMLAERCATFIQSPVN 554 (572)
Q Consensus 531 ~~NP~lTi~AlA~r~ad~I~~~~~ 554 (572)
++||++|+||||||+||+|++++.
T Consensus 557 ~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 557 SSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp SSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999998764
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=4.2e-92 Score=761.84 Aligned_cols=511 Identities=21% Similarity=0.335 Sum_probs=421.0
Q ss_pred CccccccCCCCCeEEEEcccCCC---CCCccccccchhhhcCCCccceeeeecCCCcCCCCCCceee------eecCccc
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDA---PISTAIPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVVR------LNQARVL 71 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~---~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~------~~~g~~l 71 (572)
|+|.||||+++.||||||+|+.. .+...+|..+.. +++++++|.|.++. .++.+. ++|||+|
T Consensus 20 v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~-~~~~~~dW~y~t~~--------~~r~~~~~~~~~~~rGkvL 90 (577)
T 3q9t_A 20 TVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMD-LRNSKYDWAYKTTM--------VRRDDYERIEKPNTRGKTL 90 (577)
T ss_dssp HHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGG-GTTSTTBCCEEEEE--------EEETTEEEEEEEECCBCST
T ss_pred HHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhh-ccCCCcccceEEEE--------CCccccccccccccccccc
Confidence 57999999866899999999873 234567777766 77888999999873 233334 9999999
Q ss_pred chhhhhccceeccCChhhHHHHHhcCCCCCChhhHHHHHHHhhcCCCCCcccccCCCcccccCCCcEEEEccCCc--cCh
Q psy10663 72 GGSSIINDMIHDRGSQYDYERWEGLNMTGWTYSDMDAIYTRIERTKLDTVRTETESETVTVDNDGTVTITTIKTE--KIN 149 (572)
Q Consensus 72 GGsS~~n~~~~~r~~~~df~~w~~~g~~~W~~~~l~pyy~~~e~~~~~~~~~~~~~~~~~~g~~Gp~~~~~~~~~--~~~ 149 (572)
||||.+|+|+|.|+.+.||+.|++.|+++|+|+++.|||+|+|++..+......+.. .||.+||+.++.+.+. ..+
T Consensus 91 GGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~--~hG~~Gpl~v~~~~~~~~~~~ 168 (577)
T 3q9t_A 91 GGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELE--KIGGGGPIPISHAELIDEMAP 168 (577)
T ss_dssp TGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGG--GGCCSCSEEEEECCCCGGGHH
T ss_pred cCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccc--cCCCCCCEEeeCCCCCcccch
Confidence 999999999999999999999999999999999999999999998754311101123 6899999999887641 235
Q ss_pred HHHHHHHHHHHHcCCCCC-CCCCCCCcceeeccccccCCCeecchhHHhHhhhcCCCCeEEeccceEEEEEEeCCCCEEE
Q psy10663 150 LLRSTFSKAFEDIGFKSP-DTFTVSDHVGIAPPMYYLKDGQRMIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVT 228 (572)
Q Consensus 150 ~~~~~~~~a~~~~G~~~~-~~~~~~~~~g~~~~~~~~~~g~r~s~~~~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~ 228 (572)
+.+.|.++++++|++.. |+ |++...|++.++.++..|.|+++. .|+ .+++|++|++++.|+||++++++++|+
T Consensus 169 -~~~~~~~a~~~~G~~~~~d~-n~~~~~G~~~~~~~~~~g~R~s~~-~~l---~~r~Nl~v~~~a~v~ri~~~~~~~~a~ 242 (577)
T 3q9t_A 169 -FRENLTKAWKSMGQPLIENI-YDGEMDGLTHCCDTIYRGQRSGSF-LFV---KNKPNITIVPEVHSKRLIINEADRTCK 242 (577)
T ss_dssp -HHHHHHHHHHHTTCCBCSCC-SSSCCCEEEECEESEETTEECCGG-GGS---SSCTTEEEECSEEEEEEEEETTTTEEE
T ss_pred -HHHHHHHHHHHcCCCcCCCC-CCCCcCeEEeecceecCCeEeeHH-HHH---hcCCCeEEEcCcEEEEEEEeCCCCEEE
Confidence 77888999999999987 67 888889999999889999999875 564 578999999999999999996568999
Q ss_pred EEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCCCChHHHhhcCCCceecCcccCccccCCcccccEEEEeeCCC-
Q psy10663 229 GVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKTP- 307 (572)
Q Consensus 229 gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgIG~~~~l~~~Gi~~~~~lp~VG~nl~dH~~~~~~~~~~~~~~- 307 (572)
||++.+.+|+.++|+|+||||||||+|+||+|||+|||||+++|+++||+++.|||+||+|||||+.+. +.+.++.+.
T Consensus 243 GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~~~-~~~~~~~~~~ 321 (577)
T 3q9t_A 243 GVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGVP-FVLRVKDGFG 321 (577)
T ss_dssp EEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEEEE-EEEEECTTSS
T ss_pred EEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCccee-EEEEeCCCCc
Confidence 999996569999999988999999999999999999999999999999999999999999999999984 888887654
Q ss_pred -----C-CccchHHHHHHHHHcCCCccccCCcccEEEEEeCC-----------------------CCCCCCeeEEeeccC
Q psy10663 308 -----V-SSYTINEIIYEYLTQRTGRFTDIGMSNFIGYLDTD-----------------------FKGNPDVAVTQYYFP 358 (572)
Q Consensus 308 -----~-~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~ 358 (572)
+ +.........+|...++||++.. ..+..+|.+.. ....|++++++.+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 400 (577)
T 3q9t_A 322 MDDVLLRHGPKRDAVVSAYNKNRSGPVGSG-LLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLGQPHFELDFVCMF 400 (577)
T ss_dssp SHHHHTSCSHHHHHHHHHHHHHSCSGGGCC-SEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTTSCCSEEEEEESSC
T ss_pred cchhhhcchhHHHHHHHHHHhcCCCCcccc-hhheeEEeecChhhhcchhhhhhhhccccccccCCCCCceEEEEecccc
Confidence 1 11123456778888899999864 34667776532 112566766654432
Q ss_pred CCchhhhhhhhccccCchhHHHHHhhcCCCCCeEEEEEEecccCcce-EEEecCCCCCCCCeeeCCCCCCHHHHHHHHHH
Q psy10663 359 AQDTLFLRGHLKAWNVNDDLVERFVKVNADKPILIIGLVSLCPKAEG-VVEINSNDPTKNPTIRYPLYTEEEDIKNILTA 437 (572)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g-~v~l~~~d~~~~P~i~~~y~~~~~D~~~~~~~ 437 (572)
... + .+. ........++++...+++|.||| +|+|+|+||++.|.|+++|+.++.|++.++++
T Consensus 401 ~~~------~----~~~-------~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~ 463 (577)
T 3q9t_A 401 GTA------F----QWH-------FPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREG 463 (577)
T ss_dssp CGG------G----CSS-------SCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHH
T ss_pred ccc------c----ccc-------ccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHH
Confidence 100 0 000 00011234677888889999999 99999999999999999999999999999999
Q ss_pred HHHHHHHh-cCccccccccccccccccccccCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccC
Q psy10663 438 VKMVDRVM-KYRDFKNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFS 516 (572)
Q Consensus 438 ~~~~~~i~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~ 516 (572)
++.+++++ ++++++.+...+.. |+ ....+|++|++|+|+...+.+|++||||||++++ ++|||++|||||++
T Consensus 464 ~~~~~~i~~~~~~~~~~~~~e~~---p~---~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv~ 536 (577)
T 3q9t_A 464 IRFSYDLLFKGEGFKDLVESEYP---WE---MPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNID-QGVVDPKLKVHGIK 536 (577)
T ss_dssp HHHHHHHHHHSTTGGGTEEEEES---SC---CCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTT-TCSBCTTCBBTTCB
T ss_pred HHHHHHHHHhChhhhhccccccC---CC---CCcCCHHHHHHHHHhccccccccccceecCCCCC-CceECCCCeEeCCC
Confidence 99999999 88888887655432 22 3467899999999999999999999999998655 79999999999999
Q ss_pred CceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCCC
Q psy10663 517 NLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPVN 554 (572)
Q Consensus 517 nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~~ 554 (572)
||||||+||||+.+++||++|+||||||+||+|+++++
T Consensus 537 ~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~~ 574 (577)
T 3q9t_A 537 KLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHK 574 (577)
T ss_dssp SEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHCT
T ss_pred CcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999998764
No 4
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.9e-86 Score=718.84 Aligned_cols=508 Identities=23% Similarity=0.376 Sum_probs=408.3
Q ss_pred CccccccCCCCCeEEEEcccCCCCC--CccccccchhhhcCCCccceeeeecCCCcCCCCCCceeeeecCcccchhhhhc
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDAPI--STAIPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVVRLNQARVLGGSSIIN 78 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~~~--~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~~n 78 (572)
++|.||+|++|.+|||||+|+.... ..+.|..+.. ..++.++|.|.++||+ + .++.+.+++|++|||||.+|
T Consensus 27 ~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~-~~~~~~~w~~~~~p~~----~-~~~~~~~~rGk~lGGsS~in 100 (546)
T 2jbv_A 27 AVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWME-LLESGYDWDYPIEPQE----N-GNSFMRHARAKVMGGCSSHN 100 (546)
T ss_dssp HHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGG-GTTSTTBCCEEBCCCS----S-SCTTCEECCBCSTTGGGGTS
T ss_pred HHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHh-hcCCcccccccccccC----C-CCceEEeecccccccCcccc
Confidence 4789999877999999999987632 2445655544 4466789999999887 2 56788999999999999999
Q ss_pred cceeccCChhhHHHHHh-cCCCCCChhhHHHHHHHhhcCCCCCcccccCCCcccccCCCcEEEEccCCccChHHHHHHHH
Q psy10663 79 DMIHDRGSQYDYERWEG-LNMTGWTYSDMDAIYTRIERTKLDTVRTETESETVTVDNDGTVTITTIKTEKINLLRSTFSK 157 (572)
Q Consensus 79 ~~~~~r~~~~df~~w~~-~g~~~W~~~~l~pyy~~~e~~~~~~~~~~~~~~~~~~g~~Gp~~~~~~~~~~~~~~~~~~~~ 157 (572)
+|+|+|+.+.||+.|++ +|+++|+|++|+|||+|+|+++.++.. .. .||.+||++++.+.+ ..+ ..+.|.+
T Consensus 101 ~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~----~~--~~g~~Gpl~v~~~~~-~~~-~~~~~~~ 172 (546)
T 2jbv_A 101 SCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPD----AP--HHGDSGPVHLMNVPP-KDP-TGVALLD 172 (546)
T ss_dssp CCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTT----BT--TSCBSCSEEEEECCS-CCH-HHHHHHH
T ss_pred ceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCc----cc--cCCCCCCEEEecCCC-CCH-HHHHHHH
Confidence 99999999999999998 899999999999999999999863320 23 889999999987766 678 8999999
Q ss_pred HHHHcCCCCCCCCCCCC--cceeeccccccC-CCeecchhHHhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc
Q psy10663 158 AFEDIGFKSPDTFTVSD--HVGIAPPMYYLK-DGQRMIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN 234 (572)
Q Consensus 158 a~~~~G~~~~~~~~~~~--~~g~~~~~~~~~-~g~r~s~~~~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~ 234 (572)
+++++|++..|+ |+.. +.|++.|+.+|. +|.|+++..+||.++.+++|++|++++.|++|+++++ ++++||++.+
T Consensus 173 a~~~~G~~~~d~-n~~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~-~~~~GV~~~~ 250 (546)
T 2jbv_A 173 ACEQAGIPRAKF-NTGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDAD-RRCTGVDIVD 250 (546)
T ss_dssp HHHHTTCCBCCS-SSSSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTT-SBEEEEEEES
T ss_pred HHHHCCCCccCC-CCCCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCC-CeEEEEEEEE
Confidence 999999987766 8777 899999999998 9999999999999987789999999999999999842 7999999985
Q ss_pred C-CCceeEeeccceeEeccCcchhhHHHHHcCCCChHHHhhcCCCceecCcccCccccCCcccccEEEEeeCCCCCccch
Q psy10663 235 P-QGKTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKTPVSSYTI 313 (572)
Q Consensus 235 ~-~g~~~~v~A~k~VILaAGai~Tp~LLl~SgIG~~~~l~~~Gi~~~~~lp~VG~nl~dH~~~~~~~~~~~~~~~~~~~~ 313 (572)
. +|+.++|+|+|+||||||+|+||+||++|||||+++|+++||+++.|||+||+|||||+... +.+.++.+. ...
T Consensus 251 ~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~-~~~~~~~~~-~~~-- 326 (546)
T 2jbv_A 251 SAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGV-VQFEAKQPM-VAE-- 326 (546)
T ss_dssp STTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECC-EEEEESSCC-CSC--
T ss_pred CCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccce-EEEEecCCC-ccc--
Confidence 3 28888999987999999999999999999999999999999999999999999999999995 888876542 110
Q ss_pred HHHHHHHHHcCCCccccCCcccEEEEEeCCCC-CCCCeeEEeeccCCCchhhhhhhhccccCchhHHHHHhhcCCCCCeE
Q psy10663 314 NEIIYEYLTQRTGRFTDIGMSNFIGYLDTDFK-GNPDVAVTQYYFPAQDTLFLRGHLKAWNVNDDLVERFVKVNADKPIL 392 (572)
Q Consensus 314 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (572)
. . ...+...|.+.... ..|++++++.+...... +. .++. . .....+
T Consensus 327 -----------~----~-~~~~~~~f~~~~~~~~~p~~~~~~~~~~~~~~-----~~---~~g~--------~-~~~~~~ 373 (546)
T 2jbv_A 327 -----------S----T-QWWEIGIFTPTEDGLDRPDLMMHYGSVPFDMN-----TL---RHGY--------P-TTENGF 373 (546)
T ss_dssp -----------C----S-SSCCEEEEECSSTTCSSCSEEEEEESSCCCTT-----TG---GGTC--------C-CCSSEE
T ss_pred -----------c----c-chhheEEEEecCCCCCCCceEEEecccccccc-----cc---ccCc--------c-CCCCeE
Confidence 0 0 11245677765432 36788776654321000 00 0000 0 112456
Q ss_pred EEEEEecccCcceEEEecCCCCCCCCeeeCCCCCCHH--HHHHHHHHHHHHHHHhcCccccccccccccccccccccCCC
Q psy10663 393 IIGLVSLCPKAEGVVEINSNDPTKNPTIRYPLYTEEE--DIKNILTAVKMVDRVMKYRDFKNFQTNSVQLEIKECAKCKY 470 (572)
Q Consensus 393 ~~~~~~~~p~s~g~v~l~~~d~~~~P~i~~~y~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~ 470 (572)
++...+++|.|+|+|+|+++||++.|.|+++|+.++. |++.++++++.+++++++.+++.+...+. .|+ ...
T Consensus 374 ~~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~p~---~~~ 447 (546)
T 2jbv_A 374 SLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGREL---SPG---VEA 447 (546)
T ss_dssp EEEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEEE---ESC---TTC
T ss_pred EEEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhcccccc---cCC---CCC
Confidence 6777789999999999999999999999999999999 99999999999999999988887654332 232 346
Q ss_pred CCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhh
Q psy10663 471 QSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQ 550 (572)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~ 550 (572)
.++++|++|+|....+.+|++||||||+..|+++|||++|||||++||||||+||||+++++||++||||||||+||+|+
T Consensus 448 ~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~ 527 (546)
T 2jbv_A 448 QTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIR 527 (546)
T ss_dssp CSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 78999999999988899999999999964456799999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccceeeeeeec
Q psy10663 551 SPVNVTTVTKTTVEKTSV 568 (572)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~ 568 (572)
+++..... ..+.|+++.
T Consensus 528 ~~~~~~~~-~~~~~~~~~ 544 (546)
T 2jbv_A 528 SARAGETT-TADAELSAA 544 (546)
T ss_dssp ------------------
T ss_pred hhcccCCC-CCcHHHHhh
Confidence 98865444 444454433
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=7.4e-89 Score=742.57 Aligned_cols=516 Identities=18% Similarity=0.228 Sum_probs=402.7
Q ss_pred CccccccCCCCCeEEEEcccCCCC--CCcc-ccccchhhhcCCCccceeeeecCCCcCCCCCCceeeeecCcccchhhhh
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDAP--ISTA-IPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVVRLNQARVLGGSSII 77 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~~--~~~~-~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~~ 77 (572)
++|.||+|++|++|||||+|+... +... +|..+.. ++.+.++|.|.++| ++.++.+.+++||+|||||+|
T Consensus 38 ~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~-~~~~~~~w~~~t~p------~~~~~~~~~~rGk~lGGsS~i 110 (587)
T 1gpe_A 38 TVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQ-IFGTTVDQNYLTVP------LINNRTNNIKAGKGLGGSTLI 110 (587)
T ss_dssp HHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTT-TTTSTTBCCEECCC------CTTSCCCEECCBCSTTGGGGT
T ss_pred HHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhh-ccCCcccccccccc------CCCCceeeeeccccccccccc
Confidence 479999985699999999998763 2234 6766655 55667899999887 256788999999999999999
Q ss_pred ccceeccCChhhHHHHHhc-CCCCCChhhHHHHHHHhhcCCCCCcc-----cccCCCcccccCCCcEEEEcc---CCccC
Q psy10663 78 NDMIHDRGSQYDYERWEGL-NMTGWTYSDMDAIYTRIERTKLDTVR-----TETESETVTVDNDGTVTITTI---KTEKI 148 (572)
Q Consensus 78 n~~~~~r~~~~df~~w~~~-g~~~W~~~~l~pyy~~~e~~~~~~~~-----~~~~~~~~~~g~~Gp~~~~~~---~~~~~ 148 (572)
|+|+|+|+++.||+.|++. |+++|+|++|+|||+|+|+++.+... ...+.. .||.+||++++++ .. .+
T Consensus 111 n~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~--~~g~~Gpl~v~~~~~~~~-~~ 187 (587)
T 1gpe_A 111 NGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNAT--CHGTNGTVQSGARDNGQP-WS 187 (587)
T ss_dssp SCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGG--GCCBSSSEEEBCCCCSSC-BC
T ss_pred cceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCcc--ccCCCCCEEEccCCCcCC-CC
Confidence 9999999999999999997 99999999999999999999865210 001134 8999999999865 23 67
Q ss_pred hHHHHHHHHHHHHcCCCCC-CCCCCCCcceeecccccc-CCCeecchhHHhHhhhcCCCCeEEeccceEEEEEEeCCC--
Q psy10663 149 NLLRSTFSKAFEDIGFKSP-DTFTVSDHVGIAPPMYYL-KDGQRMIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETK-- 224 (572)
Q Consensus 149 ~~~~~~~~~a~~~~G~~~~-~~~~~~~~~g~~~~~~~~-~~g~r~s~~~~yl~~~~~~~nl~i~~~~~V~~i~~~~~~-- 224 (572)
+ ..+.|.++++++|++.. |+ |++.+.|++.|+.++ .+|.|+|+..+||.++.+++|++|++++.|++|++++++
T Consensus 188 ~-~~~~~~~a~~~~G~~~~~d~-n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~ 265 (587)
T 1gpe_A 188 P-IMKALMNTVSALGVPVQQDF-LCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASG 265 (587)
T ss_dssp T-HHHHHHHHHHHTTCCBSCCT-TSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEEEEETTE
T ss_pred H-HHHHHHHHHHHcCCCcCCCC-CCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEECCCCCC
Confidence 8 89999999999999987 66 888888999998765 479999999999988788899999999999999998532
Q ss_pred CEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCCCChHHHhhcCCCceecCcccCccccCCcccccEEEEee
Q psy10663 225 TKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFT 304 (572)
Q Consensus 225 ~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgIG~~~~l~~~Gi~~~~~lp~VG~nl~dH~~~~~~~~~~~ 304 (572)
++|+||++.+.+|+.++|+|+|+||||||+|+||+|||+|||||+++|+++||+++.||| ||+|||||+... +.+.++
T Consensus 266 ~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH~~~~-~~~~~~ 343 (587)
T 1gpe_A 266 PQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQTTTT-VSSRAS 343 (587)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCCEEEE-EEEEEC
T ss_pred CEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcCcccc-eEEEeC
Confidence 599999998768889999997799999999999999999999999999999999999999 999999999984 888876
Q ss_pred CCCC--Ccc-chHHHHHHHHHcCCCccccCCcccEEEEEeCCCCCCCCeeEEeeccCCCchhhhhhhhccccCchhH---
Q psy10663 305 KTPV--SSY-TINEIIYEYLTQRTGRFTDIGMSNFIGYLDTDFKGNPDVAVTQYYFPAQDTLFLRGHLKAWNVNDDL--- 378 (572)
Q Consensus 305 ~~~~--~~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 378 (572)
++.. ... .......+|.....|+++... .+...|.+.... ... ... .. .+...+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~-~~~-------~~~-----~~------~~~~~~~~~ 403 (587)
T 1gpe_A 344 SAGAGQGQAVFFANFTETFGDYAPQARDLLN-TKLDQWAEETVA-RGG-------FHN-----VT------ALKVQYENY 403 (587)
T ss_dssp GGGCSBCEEEEEEEHHHHHGGGHHHHHHHHH-HSHHHHHHHHHH-TTS-------CSC-----HH------HHHHHHHHH
T ss_pred CCcccccchHHHHHHHHHHHhCCCCCccccc-cceeeEeecccc-ccc-------ccc-----cc------cccccHHHH
Confidence 5421 110 001122334333334433210 001111110000 000 000 00 000000
Q ss_pred HHHHhhc--------CCCCCeEEEEEEecccCcceEEEecCCCCCCCC-eeeCCCCCCHHHHHHHHHHHHHHHHHhcCcc
Q psy10663 379 VERFVKV--------NADKPILIIGLVSLCPKAEGVVEINSNDPTKNP-TIRYPLYTEEEDIKNILTAVKMVDRVMKYRD 449 (572)
Q Consensus 379 ~~~~~~~--------~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~P-~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~ 449 (572)
...+... ......+++...+++|.|+|+|+|+++||++.| +|+++|+.++.|++.++++++.+++++++.+
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~ 483 (587)
T 1gpe_A 404 RNWLLDEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGA 483 (587)
T ss_dssp HHHHHHSCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTT
T ss_pred hhhccCCCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcc
Confidence 0000000 001134667778899999999999999999999 9999999999999999999999999999988
Q ss_pred ccccccccccccccccccCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCceEecccCCCCC
Q psy10663 450 FKNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVE 529 (572)
Q Consensus 450 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D~Sv~P~~ 529 (572)
++.+...+. .|+.......++++|++|+|....+.+|++||||||++++ +||||++|||||++||||||+||||++
T Consensus 484 ~~~~~~~~~---~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~-~sVVD~~lrV~Gv~nLrVvDaSv~P~~ 559 (587)
T 1gpe_A 484 MKEYFAGET---LPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSREL-GGVVDATAKVYGTQGLRVIDGSIPPTQ 559 (587)
T ss_dssp HHHHEEEEE---ESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTCBSEEECSTTCCSSC
T ss_pred hhhhccccc---CCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCCC-CceECCCCEEECCCCcEEeeeccCCCC
Confidence 887754432 2332222347899999999998889999999999997653 699999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHhhCCCC
Q psy10663 530 MVTDSSAVALMLAERCATFIQSPVN 554 (572)
Q Consensus 530 ~~~NP~lTi~AlA~r~ad~I~~~~~ 554 (572)
+++||++|+||||||+||+|++++.
T Consensus 560 ~~~Np~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 560 VSSHVMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp CSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999998753
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=8.9e-85 Score=707.56 Aligned_cols=484 Identities=22% Similarity=0.351 Sum_probs=397.3
Q ss_pred CccccccCCCCCeEEEEcccCCCC-CCccccccchhhhcCCCccceeeeecCCCcCCCCCCceeeeecCcccchhhhhcc
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDAP-ISTAIPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVVRLNQARVLGGSSIIND 79 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~~-~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~~n~ 79 (572)
|+|.||||++++||||||||++.. +....|..+.. +++++++|.|.++||.. +.++.+.++|||+|||||+||+
T Consensus 31 v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~-~~~~~~dw~~~t~p~~~----~~~~~~~~~rG~~lGGsS~in~ 105 (526)
T 3t37_A 31 LLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPA-LQGRSYDWDYRTEAQAG----TAGRAHHWARGRLIGGSSCLHA 105 (526)
T ss_dssp HHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGG-TTTSTTBCCEECCCBGG----GTTBCCEECCBCBTTGGGGTSC
T ss_pred HHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhh-ccCCccccCccccccCC----CCCCeEeccCccEECcHHHHhh
Confidence 589999998899999999998753 34456777766 77889999999999984 6788999999999999999999
Q ss_pred ceeccCChhhHHHHHh-cCCCCCChhhHHHHHHHhhcCCCCCcccccCCCcccccCCCcEEEEccCCccChHHHHHHHHH
Q psy10663 80 MIHDRGSQYDYERWEG-LNMTGWTYSDMDAIYTRIERTKLDTVRTETESETVTVDNDGTVTITTIKTEKINLLRSTFSKA 158 (572)
Q Consensus 80 ~~~~r~~~~df~~w~~-~g~~~W~~~~l~pyy~~~e~~~~~~~~~~~~~~~~~~g~~Gp~~~~~~~~~~~~~~~~~~~~a 158 (572)
|+|+|+++.||+.|.+ .++.+|+|++++|||+++|++.... .. .|+.+||+++..+.....| +.+.|.++
T Consensus 106 ~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~------~~--~~~~~g~~~~~~~~~~~~p-~~~~~~~~ 176 (526)
T 3t37_A 106 MGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGG------DG--IHGKGGPLPIHLPADEVSP-LARAFIEA 176 (526)
T ss_dssp CBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTT------SS--SSCSSCSEECBCCSTTSCH-HHHHHHHH
T ss_pred CEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCC------cc--ccCcCCCcCcccccccCCH-HHHHHHHH
Confidence 9999999999999987 5889999999999999999987543 23 7788899888765543678 89999999
Q ss_pred HHHcCCCCC-CCCCCCCcceeeccccccCCCeecchhHHhHhh-hcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCC
Q psy10663 159 FEDIGFKSP-DTFTVSDHVGIAPPMYYLKDGQRMIASSIFLRA-IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQ 236 (572)
Q Consensus 159 ~~~~G~~~~-~~~~~~~~~g~~~~~~~~~~g~r~s~~~~yl~~-~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~ 236 (572)
++++|++.. +. +.+.+.++..|+.+|..|.|.++..+|+.+ +..++|++|++++.|++|+++ +++|+||++. ..
T Consensus 177 ~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~--~~~a~gv~~~-~~ 252 (526)
T 3t37_A 177 GASLGLPRLEGH-NSGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLE--GNQVRSLEVV-GR 252 (526)
T ss_dssp HHHTTCCBCSSS-CSSCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEE--TTEEEEEEEE-ET
T ss_pred HHHcCCCcccCC-CCCcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEec--CCeEEEEEEE-ec
Confidence 999999887 45 777888888999999999999999898865 457899999999999999999 6899999998 45
Q ss_pred CceeEeeccceeEeccCcchhhHHHHHcCCCChHHHhhcCCCceecCcccCccccCCcccccEEEEeeCCCCCccchHHH
Q psy10663 237 GKTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKTPVSSYTINEI 316 (572)
Q Consensus 237 g~~~~v~A~k~VILaAGai~Tp~LLl~SgIG~~~~l~~~Gi~~~~~lp~VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~ 316 (572)
+...++.|+ +||||||||+||+|||+|||||+.+|.++||+++.|||+||+|||||+......+..+.+.
T Consensus 253 ~~~~~~~a~-~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~--------- 322 (526)
T 3t37_A 253 QGSAEVFAD-QIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPV--------- 322 (526)
T ss_dssp TEEEEEEEE-EEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCC---------
T ss_pred CceEEEeec-ceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCc---------
Confidence 667788895 9999999999999999999999999999999999999999999999997642233333322
Q ss_pred HHHHHHcCCCccccCCcccEEEEEeCCCC---CCCCeeEEeeccCCCchhhhhhhhccccCchhHHHHHhhcCCCCCeEE
Q psy10663 317 IYEYLTQRTGRFTDIGMSNFIGYLDTDFK---GNPDVAVTQYYFPAQDTLFLRGHLKAWNVNDDLVERFVKVNADKPILI 393 (572)
Q Consensus 317 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (572)
+...........|.+.... ..|++.+.....+.... . +........+.
T Consensus 323 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~---------~~~~~~~~~~~ 373 (526)
T 3t37_A 323 ----------PPSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAPIVSE----------S---------FPAPAAGSAYS 373 (526)
T ss_dssp ----------CCCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSCCCCT----------T---------SCCCCTTSEEE
T ss_pred ----------chHhhcchhhhhhhhcccccccCCcceeeeccccccccc----------c---------cccccCCccee
Confidence 1111111233445443321 14555443332220000 0 01111234567
Q ss_pred EEEEecccCcceEEEecCCCCCCCCeeeCCCCCCHHHHHHHHHHHHHHHHHhcCccccccccccccccccccccCCCCCH
Q psy10663 394 IGLVSLCPKAEGVVEINSNDPTKNPTIRYPLYTEEEDIKNILTAVKMVDRVMKYRDFKNFQTNSVQLEIKECAKCKYQSE 473 (572)
Q Consensus 394 ~~~~~~~p~s~g~v~l~~~d~~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 473 (572)
+...+++|.|+|+|++.+.||.+.|.|+++|+.++.|++.++++++.+++++.+..++.+...++ .|++ ..++
T Consensus 374 ~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~~---~pg~----~~~~ 446 (526)
T 3t37_A 374 LLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWREREL---LPGT----PNSA 446 (526)
T ss_dssp EEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEEC---SSCC----CCSH
T ss_pred eeccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhcccccc---CCCC----CCCH
Confidence 77778999999999999999999999999999999999999999999999999988887665543 2332 3678
Q ss_pred HHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhh
Q psy10663 474 EYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQ 550 (572)
Q Consensus 474 ~~~~~~~~~~~~~~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~ 550 (572)
+++++|++....+.+|++||||||.+ ++||||++|||||++|||||||||||+++++||++||||||||+||+-.
T Consensus 447 ~~~~~~ir~~~~t~~H~~GTcrMG~d--~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~ 521 (526)
T 3t37_A 447 AEMDDFIARSVITHHHPCGTCRMGKD--PDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYH 521 (526)
T ss_dssp HHHHHHHHHHEEECSCCBCTTCBCSS--TTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCccCcccCccccCCCC--CCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhh
Confidence 89999999999999999999999964 4799999999999999999999999999999999999999999999853
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=7.4e-72 Score=603.26 Aligned_cols=462 Identities=21% Similarity=0.302 Sum_probs=335.4
Q ss_pred CccccccCCCCCeEEEEcccCCCC--CCccccccchhhhcCCCccceeeeecCCCcCCCCCCceeeeecCcccchhhhhc
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDAP--ISTAIPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVVRLNQARVLGGSSIIN 78 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~~--~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~g~~lGGsS~~n 78 (572)
|+|.|||| |.+|||||+|+... +....|..+...+.. .+| |.+.+|.. ..++.+.+++|++|||||+||
T Consensus 40 v~A~rLse--g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~--~~~-~~t~~q~~----~~~~~~~~~rg~~lGGsS~in 110 (536)
T 1ju2_A 40 PLAATLSE--KYKVLVLERGSLPTAYPNVLTADGFVYNLQQ--EDD-GKTPVERF----VSEDGIDNVRGRVLGGTSIIN 110 (536)
T ss_dssp HHHHHHTT--TSCEEEECSSBCGGGSGGGGBGGGHHHHHHS--CCC-SSSSEEEE----ECTTSCEEEEECBTTGGGGTS
T ss_pred HHHHHHhc--CCcEEEEecCCCcCCCcceecchhHhhhccC--CCc-CcCCCccc----cCCCcceeecceecccccccc
Confidence 57999997 89999999998752 222333333221222 234 55666653 345668899999999999999
Q ss_pred cceeccCChhhHHHHHhcCCCCCChhhHHHHHHHhhcCCCCCcccccCCCcccccCCCcEEEEccCCccChHHHHHHHHH
Q psy10663 79 DMIHDRGSQYDYERWEGLNMTGWTYSDMDAIYTRIERTKLDTVRTETESETVTVDNDGTVTITTIKTEKINLLRSTFSKA 158 (572)
Q Consensus 79 ~~~~~r~~~~df~~w~~~g~~~W~~~~l~pyy~~~e~~~~~~~~~~~~~~~~~~g~~Gp~~~~~~~~~~~~~~~~~~~~a 158 (572)
+|+|+|+++.||+.+ | .+|+|++++|||+++|+.+... +. ..+ +.+.|.++
T Consensus 111 ~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~~-----------------------~~-~~~-~~~~~~~a 161 (536)
T 1ju2_A 111 AGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVYK-----------------------PN-SQS-WQSVTKTA 161 (536)
T ss_dssp CCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCBC-----------------------CC-CCH-HHHHHHHH
T ss_pred CeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCCC-----------------------CC-CCc-HHHHHHHH
Confidence 999999999999742 2 2599999999999999864210 11 346 78889999
Q ss_pred HHHcCCCCC-CCCCCCCccee--eccccccCCCeecchhHHhHhhhcCCCCeEEeccceEEEEEEeCC-CCEEEEEEEEc
Q psy10663 159 FEDIGFKSP-DTFTVSDHVGI--APPMYYLKDGQRMIASSIFLRAIKDKNTVQVSKNSEVTKLCFDET-KTKVTGVEFRN 234 (572)
Q Consensus 159 ~~~~G~~~~-~~~~~~~~~g~--~~~~~~~~~g~r~s~~~~yl~~~~~~~nl~i~~~~~V~~i~~~~~-~~~a~gV~~~~ 234 (572)
++++|++.. .. +.....|+ +.+ .++.+|.|+++.. |++. ++++|++|+++++|++|+++++ +++++||++.+
T Consensus 162 ~~~~G~~~~~~~-~~~~~~g~~~g~~-~~~~~g~r~s~~~-~~~~-~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~ 237 (536)
T 1ju2_A 162 FLEAGVHPNHGF-SLDHEEGTRITGS-TFDNKGTRHAADE-LLNK-GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD 237 (536)
T ss_dssp HHHTTCCCEEEE-CCBCCSEEEECEE-SBCTTSBBCCGGG-GGGG-SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC
T ss_pred HHHcCCCCCCCc-ccCCCCCceeeeE-EECCCCeEecHHH-hhhh-hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe
Confidence 999998642 11 11111221 111 1236899999875 8766 5789999999999999999852 25999999996
Q ss_pred CCCceeEee--ccceeEeccCcchhhHHHHHcCCCChHHHhhcCCCceecCcccCccccCCcccccEEEEeeCCCCCccc
Q psy10663 235 PQGKTIKVN--ANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKTPVSSYT 312 (572)
Q Consensus 235 ~~g~~~~v~--A~k~VILaAGai~Tp~LLl~SgIG~~~~l~~~Gi~~~~~lp~VG~nl~dH~~~~~~~~~~~~~~~~~~~ 312 (572)
.+|+.++++ ++|+||||||+|+||+||++|||||+++|+++||+++.|||+||+|||||+... +.+.++.+..
T Consensus 238 ~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~-~~~~~~~~~~---- 312 (536)
T 1ju2_A 238 SNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNF-INILPPNPIE---- 312 (536)
T ss_dssp TTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEE-EEECCSSCCC----
T ss_pred CCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCccee-EEEEeCCCcc----
Confidence 678877774 657999999999999999999999999999999999999999999999999874 7766654320
Q ss_pred hHHHHHHHHHcCCCccccCCcccEEEEEeCCCCCCCCeeEEeeccCCCchhhhhhhhccccCchhHHHHHhhcCCCCCeE
Q psy10663 313 INEIIYEYLTQRTGRFTDIGMSNFIGYLDTDFKGNPDVAVTQYYFPAQDTLFLRGHLKAWNVNDDLVERFVKVNADKPIL 392 (572)
Q Consensus 313 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (572)
.+.....+... .|..... .. ..... .. ... +.... .........
T Consensus 313 ------------~~~~~~~~~~~--~~~~~~~------g~--~~~~~-~~--~~~------~~~~~-----~~~~~~~~~ 356 (536)
T 1ju2_A 313 ------------PTIVTVLGISN--DFYQCSF------SS--LPFTT-PP--FGF------FPSSS-----YPLPNSTFA 356 (536)
T ss_dssp ------------CCCCCEEEECS--SEEEEEE------EE--CCCSS-CC--BTT------BSSSC-----CCCCSSCEE
T ss_pred ------------cccchhhhHHH--HHHHcCC------CC--CCCCh-hh--hee------ecCcc-----cCCCCcceE
Confidence 01000000000 0110000 00 00000 00 000 00000 011112223
Q ss_pred EEEEEecccCcceEEEe-cCCCCCCCCeeeCCCCCCHHHHHHHHHHHHHHHHHhcCcccccccccccccccccccc----
Q psy10663 393 IIGLVSLCPKAEGVVEI-NSNDPTKNPTIRYPLYTEEEDIKNILTAVKMVDRVMKYRDFKNFQTNSVQLEIKECAK---- 467 (572)
Q Consensus 393 ~~~~~~~~p~s~g~v~l-~~~d~~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~---- 467 (572)
.+...+++|.|||+|+| .++||++.|.|+++|+.++.|++.++++++.+++++++.+++.+...+. .+.|++..
T Consensus 357 ~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~p~~~~~~~~ 435 (536)
T 1ju2_A 357 HFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDL-PGVEGFNILGIP 435 (536)
T ss_dssp EEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCC-STTCSCCBSSSC
T ss_pred EEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhcccc-ccCCCccccccC
Confidence 34455678999999999 8899999999999999999999999999999999999998888764432 11122110
Q ss_pred --CCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCceEecccCCCCCCCcchHHHHHHHHHHH
Q psy10663 468 --CKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERC 545 (572)
Q Consensus 468 --~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ 545 (572)
....++++|++|+|....+.+|++|||||| +|||++|||||++||||||+||||+++++||++|+||||||+
T Consensus 436 ~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG------~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~ 509 (536)
T 1ju2_A 436 LPKDQTDDAAFETFCRESVASYWHYHGGCLVG------KVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYV 509 (536)
T ss_dssp CCSCTTCHHHHHHHHHHHCEECSCCEESSCBT------TTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHhccCccccCcCccCCc------cEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHH
Confidence 024579999999999999999999999999 799999999999999999999999999999999999999998
Q ss_pred HHHhhCC
Q psy10663 546 ATFIQSP 552 (572)
Q Consensus 546 ad~I~~~ 552 (572)
|+.|+++
T Consensus 510 A~~ii~~ 516 (536)
T 1ju2_A 510 GIKILQE 516 (536)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8887654
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=3.1e-68 Score=578.89 Aligned_cols=478 Identities=18% Similarity=0.218 Sum_probs=347.6
Q ss_pred CccccccCCCCCeEEEEcccCCCCC--C---------------ccccccchhhhcCCCccceeeeecCCCcCCCCCCcee
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDAPI--S---------------TAIPAMWHESIQDSKLDWGFVLESNPSYGLGLKDNVV 63 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~~~--~---------------~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 63 (572)
++|.||+|+ |++|||||+|+.... . .++|..+.. .|.. ..++. ....+
T Consensus 21 ~~A~~L~~~-g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-------~~~~-~~~~~------~~~~~ 85 (546)
T 1kdg_A 21 IAADRLSEA-GKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFES-------LFTD-SNPFW------WCKDI 85 (546)
T ss_dssp HHHHHHHHT-TCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGG-------GGTC-SCCTT------BCTTB
T ss_pred HHHHHHHhC-CCeEEEEeCCCCCcccccccccccccccccceeeccchhHHH-------hhcC-CCccc------ccccc
Confidence 479999986 999999999986421 0 011111111 0110 00010 01124
Q ss_pred eeecCcccchhhhhccceeccCChhhHHH---HHhcCCCCCChhhHHHHHHHhhcCCCCCcccccCCCcccccCCCcEEE
Q psy10663 64 RLNQARVLGGSSIINDMIHDRGSQYDYER---WEGLNMTGWTYSDMDAIYTRIERTKLDTVRTETESETVTVDNDGTVTI 140 (572)
Q Consensus 64 ~~~~g~~lGGsS~~n~~~~~r~~~~df~~---w~~~g~~~W~~~~l~pyy~~~e~~~~~~~~~~~~~~~~~~g~~Gp~~~ 140 (572)
.+.+|++|||||.+|+|+++|+.+.||+. |+ .+|+|++ |||+|+|+..... . .+..+|+.
T Consensus 86 ~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~----~~w~~~~--p~~~k~e~~~~~~-------~--~~~~~g~~-- 148 (546)
T 1kdg_A 86 TVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWP----SSWTNHA--PYTSKLSSRLPST-------D--HPSTDGQR-- 148 (546)
T ss_dssp SSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCC----GGGSCCH--HHHHHHHHHSCCB-------S--CCSTTSCC--
T ss_pred ccccceeecccccccceEEecCChHHhcCcccCc----cccCccc--HHHHHHHhcCCCC-------c--cCCCCCCc--
Confidence 67899999999999999999999999987 84 6799988 9999999866321 1 23334432
Q ss_pred EccCCccChHHHHHHHHHHHHcCCCCCCCCCC--CCcceeeccccccCCCeecchhHHhHhhhcCCCCeEEeccceEEEE
Q psy10663 141 TTIKTEKINLLRSTFSKAFEDIGFKSPDTFTV--SDHVGIAPPMYYLKDGQRMIASSIFLRAIKDKNTVQVSKNSEVTKL 218 (572)
Q Consensus 141 ~~~~~~~~~~~~~~~~~a~~~~G~~~~~~~~~--~~~~g~~~~~~~~~~g~r~s~~~~yl~~~~~~~nl~i~~~~~V~~i 218 (572)
+ ..+ ..+.|.++++++|++..+..+. ..+.|++.++++|.+|.|+++..+||.++.+++|++|++++.|++|
T Consensus 149 ----~-~~~-~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i 222 (546)
T 1kdg_A 149 ----Y-LEQ-SFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNV 222 (546)
T ss_dssp ----C-SCH-HHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEE
T ss_pred ----c-CCH-HHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEE
Confidence 3 456 7788999999999876543111 2456888888889999999999899999888899999999999999
Q ss_pred EEeCCCCEEEEEEEEcC-CCce--eEeeccceeEeccCcchhhHHHHHcCCCChHHHhhc------CCCce-----ecCc
Q psy10663 219 CFDETKTKVTGVEFRNP-QGKT--IKVNANREVVLAANSINSVRILQQSGVGDAALLSKY------NIPLV-----KNLP 284 (572)
Q Consensus 219 ~~~~~~~~a~gV~~~~~-~g~~--~~v~A~k~VILaAGai~Tp~LLl~SgIG~~~~l~~~------Gi~~~-----~~lp 284 (572)
+++ +++++||++.+. +|+. +++.+.|+||||||+++||+||++|||||+++|+++ ||+++ .|||
T Consensus 223 ~~~--~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp 300 (546)
T 1kdg_A 223 VRN--GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP 300 (546)
T ss_dssp EEE--TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC
T ss_pred EEe--CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC
Confidence 998 579999999853 4653 456555799999999999999999999999999999 58874 7999
Q ss_pred ccCccccCCcccccEEEEeeCC-C-CC-----ccchHHHHHHHHHcCCCccccCCcccEEEEEeCCCC-CC--CCeeEEe
Q psy10663 285 GVGKRLSLHPMFFGLSYTFTKT-P-VS-----SYTINEIIYEYLTQRTGRFTDIGMSNFIGYLDTDFK-GN--PDVAVTQ 354 (572)
Q Consensus 285 ~VG~nl~dH~~~~~~~~~~~~~-~-~~-----~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~ 354 (572)
||+|||||+.+. +.+..+.. . .+ .........+|.....||++.... . ..|+..... .. +.++..+
T Consensus 301 -VG~nL~DH~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~ 376 (546)
T 1kdg_A 301 -VGMNAQDNPSIN-LVFTHPSIDAYENWADVWSNPRPADAAQYLANQSGVFAGASP-K-LNFWRAYSGSDGFTRYAQGTV 376 (546)
T ss_dssp -TTTTBBCCCCEE-EEEECTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCSC-C-EEEEEEEECTTSCEEEEEEEE
T ss_pred -cccCcccCccee-EEEecCCcccccchhhhhcchhHHHHHHHHHcCCcccccCCc-c-eEEEEccCCCCcchhhhhhee
Confidence 999999999984 77763221 1 00 001123456777778888875322 2 234432111 01 1222222
Q ss_pred eccCCCchhhhhhhhccccCchhHHHHHhhcCCCCCeEEEEEEeccc-CcceEEEecCCCCCCCCeeeCCCCCCHHHHHH
Q psy10663 355 YYFPAQDTLFLRGHLKAWNVNDDLVERFVKVNADKPILIIGLVSLCP-KAEGVVEINSNDPTKNPTIRYPLYTEEEDIKN 433 (572)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~s~g~v~l~~~d~~~~P~i~~~y~~~~~D~~~ 433 (572)
.+.... + .++ .+......+++....++| .|+|+|+|++.| ..|.|+++|+.++.|++.
T Consensus 377 ~~~~~~-------~---~~~---------~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~ 435 (546)
T 1kdg_A 377 RPGAAS-------V---NSS---------LPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTV 435 (546)
T ss_dssp EESCSC-------C---CCS---------SCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHH
T ss_pred cccccc-------c---ccc---------cccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHH
Confidence 211000 0 000 001112356676777888 999999999887 567789999999999999
Q ss_pred HHHHHHHHHHHhcCccccccccccccccccccccCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCcee
Q psy10663 434 ILTAVKMVDRVMKYRDFKNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVN 513 (572)
Q Consensus 434 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~d~~~VVD~~~rV~ 513 (572)
++++++.+++++++.+...+ ..|++ ..+++++.++++....+++|++||||||+++ +++|||++||||
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~-------~~p~~----~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~-~~~VVD~~lrV~ 503 (546)
T 1kdg_A 436 LLQALHDVVSNIGSIPGLTM-------ITPDV----TQTLEEYVDAYDPATMNSNHWVSSTTIGSSP-QSAVVDSNVKVF 503 (546)
T ss_dssp HHHHHHHHTTTGGGSTTCEE-------EESCT----TSCHHHHHHHSCGGGGCCSCCBCTTCBCSCT-TTCSBCTTCBBT
T ss_pred HHHHHHHHHHHhcCCCcccc-------cCCCC----CCCHHHHHHHHHHhcCcccccccceecCCCC-CCeeECCCCeEc
Confidence 99999999999876532211 12321 2568888889888888999999999999753 479999999999
Q ss_pred ccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCCCC
Q psy10663 514 GFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPVNV 555 (572)
Q Consensus 514 g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~~~ 555 (572)
|++||||||+||||+++++||++|+||||||+||+|++++..
T Consensus 504 Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~ 545 (546)
T 1kdg_A 504 GTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGG 545 (546)
T ss_dssp TCSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTTC
T ss_pred cCCCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999988753
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=2.9e-67 Score=564.50 Aligned_cols=441 Identities=16% Similarity=0.154 Sum_probs=320.4
Q ss_pred CccccccCCCCCeEEEEcccCCCCC-C--ccccccchhhhcCCCccceeeeecCC--------------CcCCCC----C
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDAPI-S--TAIPAMWHESIQDSKLDWGFVLESNP--------------SYGLGL----K 59 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~~~-~--~~~p~~~~~~~~~~~~~w~~~~~~~~--------------~~~~~~----~ 59 (572)
++|.+|++. |++|+|||+|+.... . ...+... . .....++|.|.++|+. ..+.+. .
T Consensus 19 ~~a~~l~~~-~~~v~~~e~~~~~~~~~~~~~~~~~~-~-~~~~~~~w~~~t~p~~~~~~l~~~~~~~~~~~~~g~~~~~~ 95 (504)
T 1n4w_A 19 VSALRLGEA-GVQTLMLEMGQLWNQPGPDGNIFCGM-L-NPDKRSSWFKNRTEAPLGSFLWLDVVNRNIDPYAGVLDRVN 95 (504)
T ss_dssp HHHHHHHHT-TCCEEEEESSCCCCCCCTTSSSSCCT-T-SCCGGGSBSCSBCCCCTTCHHHHGGGCCBCCCCBCSEEEEE
T ss_pred HHHHHHHhC-CCcEEEEeCCCCCCCCCCcccccccc-c-ccCccccccccccccccccccccccccccccccccccceec
Confidence 368999984 999999999986431 1 1222211 1 2234578999887761 011111 5
Q ss_pred CceeeeecCcccchhhhhccceeccCChhhHHHHHhcCCCCCChhhHH-HHHHHhhcCCCCCcccccCCCcccccCCCcE
Q psy10663 60 DNVVRLNQARVLGGSSIINDMIHDRGSQYDYERWEGLNMTGWTYSDMD-AIYTRIERTKLDTVRTETESETVTVDNDGTV 138 (572)
Q Consensus 60 ~~~~~~~~g~~lGGsS~~n~~~~~r~~~~df~~w~~~g~~~W~~~~l~-pyy~~~e~~~~~~~~~~~~~~~~~~g~~Gp~ 138 (572)
++.+.+++|++|||||+||+|+|+|+++.||+.|. ++|.|++|+ |||+|+|+++.+.... .. .| ..+|
T Consensus 96 ~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~---~~--~~-~~~~- 164 (504)
T 1n4w_A 96 YDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNHID---TK--WF-EDTE- 164 (504)
T ss_dssp CSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCC---HH--HH-HHCG-
T ss_pred CCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCCCC---cc--cc-cCCC-
Confidence 66789999999999999999999999999999996 689999999 9999999987543210 00 11 0011
Q ss_pred EEEccCCccChHHHHHHHHHHHHcCC-----CCC-CCCCC---------CCcceeeccccccCCCeecchhHHhHhhhcC
Q psy10663 139 TITTIKTEKINLLRSTFSKAFEDIGF-----KSP-DTFTV---------SDHVGIAPPMYYLKDGQRMIASSIFLRAIKD 203 (572)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~a~~~~G~-----~~~-~~~~~---------~~~~g~~~~~~~~~~g~r~s~~~~yl~~~~~ 203 (572)
..+ ..+.|.++++++|+ +.. |+ |. ..+..++.|..+|++| |+++..+||.++.+
T Consensus 165 --------~~p-~~~~~~~a~~~~G~~~~~~p~~~d~-n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~ 233 (504)
T 1n4w_A 165 --------WYK-FARVSREQAGKAGLGTVFVPNVYDF-GYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALG 233 (504)
T ss_dssp --------GGH-HHHHHHHHHHHTTCCEEECCBSBCH-HHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHH
T ss_pred --------cch-HHHHHHHHHHHcCCCCccCCccccc-CccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHh
Confidence 146 78899999999999 433 33 21 2345667788889999 99999999999888
Q ss_pred CCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCC---ceeEeeccceeEeccCcchhhHHHHHcC-CCChHHHhhcCCCc
Q psy10663 204 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQG---KTIKVNANREVVLAANSINSVRILQQSG-VGDAALLSKYNIPL 279 (572)
Q Consensus 204 ~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g---~~~~v~A~k~VILaAGai~Tp~LLl~Sg-IG~~~~l~~~Gi~~ 279 (572)
++|++|++++.|++|++++++++++||++.+.+| +.++|+|+ +||||||+|+||+|||+|| || ||++
T Consensus 234 ~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~-~VIlaaG~~~s~~lL~~Sg~ig--------~i~~ 304 (504)
T 1n4w_A 234 TGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCR-YLFLGAGSLGSTELLVRARDTG--------TLPN 304 (504)
T ss_dssp TTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT--------SSTT
T ss_pred cCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeC-EEEEccCCCCCHHHHHhccccC--------CCCC
Confidence 8899999999999999986446999999986567 57889996 9999999999999999999 98 7888
Q ss_pred eecCcccCccccCCcccccEEEEeeCCCCCccchHHHHHHHHHcCCCccccCCcccEEEEEeCCCCCCCCeeEEeeccCC
Q psy10663 280 VKNLPGVGKRLSLHPMFFGLSYTFTKTPVSSYTINEIIYEYLTQRTGRFTDIGMSNFIGYLDTDFKGNPDVAVTQYYFPA 359 (572)
Q Consensus 280 ~~~lp~VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (572)
+.+ +||+||+||+... +.+.... . ...|++.. ......|.+......|++++.+ ..+
T Consensus 305 ~~~--~VG~nl~dh~~~~-~~~~~~~-~---------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~- 361 (504)
T 1n4w_A 305 LNS--EVGAGWGPNGNIM-TARANHM-W---------------NPTGAHQS--SIPALGIDAWDNSDSSVFAEIA-PMP- 361 (504)
T ss_dssp CCT--TTTCCBBCTTCEE-EEEECCT-T---------------CCCCSCCC--SSCCEEEEECCSSTTCEEEEEE-CCC-
T ss_pred CCh--hhccccccCCcce-eeeccCC-C---------------CcccCcCC--CccEEEEeccCCCCCceEEEec-cCC-
Confidence 765 5999999999873 4433221 1 01233321 1123345444322234332221 000
Q ss_pred CchhhhhhhhccccCchhHHHHHhhcCCCCCeEEEEEEecccCcceEEEecCCCCCCCCeeeCCCCCCHHHHHHHHHHHH
Q psy10663 360 QDTLFLRGHLKAWNVNDDLVERFVKVNADKPILIIGLVSLCPKAEGVVEINSNDPTKNPTIRYPLYTEEEDIKNILTAVK 439 (572)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~P~i~~~y~~~~~D~~~~~~~~~ 439 (572)
.. +. ..+.+...+.+|.++|+|+|+++|| .|+++|+.++ | +.+.++++
T Consensus 362 ----------------~~--------~~--~~~~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~ 409 (504)
T 1n4w_A 362 ----------------AG--------LE--TWVSLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAK 409 (504)
T ss_dssp ----------------CS--------SC--CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHH
T ss_pred ----------------hH--------HH--hhhhhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHH
Confidence 00 00 2355566678899999999998765 6899999999 8 77888888
Q ss_pred -HHHHHhcCccccccccccccccccccccCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCc
Q psy10663 440 -MVDRVMKYRDFKNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNL 518 (572)
Q Consensus 440 -~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL 518 (572)
.+++++++.+. + ++.+. +.. + ++++ ...+++|++|||||| +|||++|||||++||
T Consensus 410 ~~~~~i~~~~~~--~---------~~~~~--~~~-~-~~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nL 465 (504)
T 1n4w_A 410 ALFDRINKANGT--I---------YRYDL--FGT-Q-LKAF---ADDFCYHPLGGCVLG------KATDDYGRVAGYKNL 465 (504)
T ss_dssp HHHHHHHHHHTC--C---------BCCSS--SSS-S-CCSE---ECSEESSCBCSSCTT------TTBCTTSBBTTCSSE
T ss_pred HHHHHHHhccCC--C---------cCCch--hhh-h-hhhh---ccCccccccCCceee------eEECCCCeEeccCCe
Confidence 88888876442 1 11000 000 0 0001 345789999999999 899999999999999
Q ss_pred eEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCCC
Q psy10663 519 RVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPVN 554 (572)
Q Consensus 519 ~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~~ 554 (572)
||||+||||+++++||++||||||||+||+|++++.
T Consensus 466 rVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 466 YVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp EECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred EEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999997754
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=6.7e-66 Score=553.88 Aligned_cols=440 Identities=16% Similarity=0.147 Sum_probs=313.6
Q ss_pred CccccccCCCCCeEEEEcccCCCCCCccccc--cchhhh-cCCCccceeeeecCCCc-----------CCCC------CC
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDAPISTAIPA--MWHESI-QDSKLDWGFVLESNPSY-----------GLGL------KD 60 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~~~~~~~p~--~~~~~~-~~~~~~w~~~~~~~~~~-----------~~~~------~~ 60 (572)
++|.||++ +|++|+|||+|+.... ..|. .+.... ....++|.|.++||... .... .+
T Consensus 25 ~~a~~l~~-~~~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~~~~~~~~~g~~~~~~~ 101 (507)
T 1coy_A 25 VAALRLTQ-AGIPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGINKSIDRYVGVLDSERF 101 (507)
T ss_dssp HHHHHHHH-TTCCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSCCCBCCCCBCSEEEEEC
T ss_pred HHHHHHHH-CCCcEEEEECCCCCCC--CCCccccccccccccccccccccccccccccccccccccccccccceeeEecC
Confidence 37899998 4999999999986532 1221 111102 23468999998886110 0112 56
Q ss_pred ceeeeecCcccchhhhhccceeccCChhhHHHHHhcCCCCCChhhHH-HHHHHhhcCCCCCcccccCCCcccccCCCcEE
Q psy10663 61 NVVRLNQARVLGGSSIINDMIHDRGSQYDYERWEGLNMTGWTYSDMD-AIYTRIERTKLDTVRTETESETVTVDNDGTVT 139 (572)
Q Consensus 61 ~~~~~~~g~~lGGsS~~n~~~~~r~~~~df~~w~~~g~~~W~~~~l~-pyy~~~e~~~~~~~~~~~~~~~~~~g~~Gp~~ 139 (572)
+.+.+++|++|||||+||+|+|+|+++.||+.|. ++|.|++|+ |||+|+|+++.+.... . ..
T Consensus 102 ~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~-------~-----~~- 164 (507)
T 1coy_A 102 SGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVNNID-------Q-----AW- 164 (507)
T ss_dssp SSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCC-------H-----HH-
T ss_pred CCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCCCCC-------C-----cc-
Confidence 7789999999999999999999999999999996 579999999 9999999987543110 0 00
Q ss_pred EEccCCccChHHHHHHHHHHHHcCC-----CCC-CCCCC---------CCcceeeccccccCCCeecchhHHhHhhhcCC
Q psy10663 140 ITTIKTEKINLLRSTFSKAFEDIGF-----KSP-DTFTV---------SDHVGIAPPMYYLKDGQRMIASSIFLRAIKDK 204 (572)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~a~~~~G~-----~~~-~~~~~---------~~~~g~~~~~~~~~~g~r~s~~~~yl~~~~~~ 204 (572)
.++.+..+ ..+.|.++++++|+ +.. |+ |. ..+..++.|..+|.+| |+++..+||.++.++
T Consensus 165 --~~~~~~~~-~~~~~~~a~~~~G~~~~~~p~~~d~-n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~~~l~~a~~~ 239 (507)
T 1coy_A 165 --FESTEWYK-FARTGRKTAQRSGFTTAFVPNVYDF-EYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDKTYLAQAAAT 239 (507)
T ss_dssp --HHHCGGGH-HHHHHHHHHHHTTCCEEECCBSBCH-HHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTTTHHHHHHHT
T ss_pred --ccccccch-HHHHHHHHHHHcCCCCccCCccccc-CcccccCCCcccCccccccccccCCCC-CcChHHHHHHHHHhc
Confidence 01110256 88999999999999 543 33 21 1245677888889999 999999999998888
Q ss_pred CCeEEeccceEEEEEEeCCCCEEEEEEEEcCCC---ceeEeeccceeEeccCcchhhHHHHHcC-CCChHHHhhcCCCce
Q psy10663 205 NTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQG---KTIKVNANREVVLAANSINSVRILQQSG-VGDAALLSKYNIPLV 280 (572)
Q Consensus 205 ~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g---~~~~v~A~k~VILaAGai~Tp~LLl~Sg-IG~~~~l~~~Gi~~~ 280 (572)
+|++|++++.|++|++++++++++||++.+.+| +.++|+|+ +||||||+|+||+|||+|| || +||+.
T Consensus 240 ~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~-~VIlaaGa~~sp~lL~~Sg~iG--------~lpnl 310 (507)
T 1coy_A 240 GKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTAD-RVFFAAGSVGTSKLLVSMKAQG--------HLPNL 310 (507)
T ss_dssp TCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT--------SSTTS
T ss_pred CCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeC-EEEEccCccCCHHHHHhcccCC--------CCCcc
Confidence 899999999999999985434899999986566 46889996 9999999999999999999 98 36666
Q ss_pred ecCcccCccccCCcccccEEEEeeCCCCCccchHHHHHHHHHcCCCccccCCcccEEEEEeCCCCCCCCeeEEeeccCCC
Q psy10663 281 KNLPGVGKRLSLHPMFFGLSYTFTKTPVSSYTINEIIYEYLTQRTGRFTDIGMSNFIGYLDTDFKGNPDVAVTQYYFPAQ 360 (572)
Q Consensus 281 ~~lp~VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (572)
.+ +||+||+||+... ....... + ...|++.... ....+........|++++.. ..+
T Consensus 311 ~d--~VG~~l~~h~~~~-~~~~~~~--------------~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~-- 366 (507)
T 1coy_A 311 SS--QVGEGWGNNGNIM-VGRANHM--------------W--DATGSKQATI--PTMGIDNWADPTAPIFAEIA-PLP-- 366 (507)
T ss_dssp CT--TTTCCBBCTTEEE-EEEECCT--------------T--SCCCSCCCSS--CCEEEECTTCTTSCEEEEEE-CCC--
T ss_pred Ch--hhCCccccCCccc-ccccccc--------------c--ccccccCCCc--ceEEEeccCCCCCCcEEEec-cCC--
Confidence 55 4999999999752 3211110 0 1234432211 11222222111133332221 000
Q ss_pred chhhhhhhhccccCchhHHHHHhhcCCCCCeEEEEEEecccCcceEEEecCCCCCCCCeeeCCCCCCHHHHHHHHHHHH-
Q psy10663 361 DTLFLRGHLKAWNVNDDLVERFVKVNADKPILIIGLVSLCPKAEGVVEINSNDPTKNPTIRYPLYTEEEDIKNILTAVK- 439 (572)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~~~P~i~~~y~~~~~D~~~~~~~~~- 439 (572)
.. +. ..+.++..+.+|.++|+|+|+++|+ .|+++|+.++ | ..+.++++
T Consensus 367 ---------------~~--------~~--~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~ 415 (507)
T 1coy_A 367 ---------------AG--------LE--TYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKK 415 (507)
T ss_dssp ---------------CS--------SC--CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHH
T ss_pred ---------------HH--------Hh--hheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHH
Confidence 00 00 2344555668899999999998765 7999999999 8 45677766
Q ss_pred HHHHHhcCccccccccccccccccccccCCCCCHHHHHHHHHhccCCCccccccccccCCCCCCCccCCCCceeccCCce
Q psy10663 440 MVDRVMKYRDFKNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLR 519 (572)
Q Consensus 440 ~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~ 519 (572)
.+++++++.+. +... +. +.+++ ++| ...+++|++|||||| +|||++|||||++|||
T Consensus 416 ~~~~i~~~~~~--~~~~----~~-------~~~d~--~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLr 471 (507)
T 1coy_A 416 VFDKINQKEGT--IYRT----DL-------FGVYY--KTW---GDDFTYHPLGGVLLN------KATDNFGRLPEYPGLY 471 (507)
T ss_dssp HHHHHHHHHTC--CBCS----SC-------C--CC--CSS---BCSEESCCBCSSCTT------TTSCTTSBCTTSTTEE
T ss_pred HHHHHHhhcCC--cccC----cc-------cccch--hhh---cccccccccCCcchh------heECCCCeEeccCCeE
Confidence 88999876441 1110 00 01111 112 346789999999999 6999999999999999
Q ss_pred EecccCCCCCCCcchHHHHHHHHHHHHHHhhCCC
Q psy10663 520 VVGEPVIPVEMVTDSSAVALMLAERCATFIQSPV 553 (572)
Q Consensus 520 V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~ 553 (572)
|||+||||+++++||++||||||||+||+|+++.
T Consensus 472 VvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~~ 505 (507)
T 1coy_A 472 VVDGSLVPGNVGVNPFVTITALAERNMDKIISSD 505 (507)
T ss_dssp ECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHT
T ss_pred EeechhccCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999998653
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=2.2e-48 Score=425.92 Aligned_cols=419 Identities=15% Similarity=0.096 Sum_probs=273.6
Q ss_pred cCcccchhhhhccceeccCChhhHHHHHhcCCCCC---ChhhHHHHHHHhhcCCCCCcccccCCCcccccCCCcEEEEcc
Q psy10663 67 QARVLGGSSIINDMIHDRGSQYDYERWEGLNMTGW---TYSDMDAIYTRIERTKLDTVRTETESETVTVDNDGTVTITTI 143 (572)
Q Consensus 67 ~g~~lGGsS~~n~~~~~r~~~~df~~w~~~g~~~W---~~~~l~pyy~~~e~~~~~~~~~~~~~~~~~~g~~Gp~~~~~~ 143 (572)
.+..+||.+.+|.+...|..+.+ .+. -..+| .+.++.++|++.+..+..+.. .
T Consensus 157 ~~~~vGG~~~~~~g~~~r~~~~e--~~~--~l~~~~v~~~~~l~~~~~~~~~l~~vgg~--------------~------ 212 (623)
T 3pl8_A 157 VTRVVGGMSTAWTCATPRFDREQ--RPL--LVKDDADADDAEWDRLYTKAESYFQTGTD--------------Q------ 212 (623)
T ss_dssp ECCSTTGGGGTCCCBCCCCCGGG--SCC--SSTTCHHHHHHHHHHHHHHHHHHHTEESC--------------T------
T ss_pred ccccccCcceeeccccccCChHH--hhh--hhcccCccChhhHHHHHHHHHHhcccccc--------------c------
Confidence 57789999999999999998853 111 11334 468899999999887642211 0
Q ss_pred CCccChHHHHHHHHHHHHcCCCCCCCCCCCCcceeeccccccCCCeecchhHHhHhhh------cCCCCeEEeccceEEE
Q psy10663 144 KTEKINLLRSTFSKAFEDIGFKSPDTFTVSDHVGIAPPMYYLKDGQRMIASSIFLRAI------KDKNTVQVSKNSEVTK 217 (572)
Q Consensus 144 ~~~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~yl~~~------~~~~nl~i~~~~~V~~ 217 (572)
+ ..+.........+.........+ ... ...... ......|+++..+||.++ .+++|++|++++.|++
T Consensus 213 -~-~~~~~~~~~~~~l~~~~~~~~~~-~~~-p~a~~~---~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~ 285 (623)
T 3pl8_A 213 -F-KESIRHNLVLNKLTEEYKGQRDF-QQI-PLAATR---RSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVACER 285 (623)
T ss_dssp -T-TTCHHHHHHHHHHHHHTTTTSCC-EEC-CEEEEE---EETTEEEECCHHHHCCCCCEEETTEEEEEEEEECSEEEEE
T ss_pred -c-cCccccccchHHHHHhhhhcccc-ccc-chhhcc---CCCCccccchHHhhhhhhhcchhhccCCCEEEEeCCEEEE
Confidence 1 11101111111222211100000 000 000000 012346888888999876 5667999999999999
Q ss_pred EEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHHHHcCCCChHHHhhcCCCceecCcccCccccCCccc
Q psy10663 218 LCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMF 296 (572)
Q Consensus 218 i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgIG~~~~l~~~Gi~~~~~lp~VG~nl~dH~~~ 296 (572)
|++++++++++||++.+ .+|+.+++.|+ +||||+|++.||+||++||||++.+|+.+||++ |||+||+||+||+..
T Consensus 286 i~~~~~~~~v~GV~~~~~~~g~~~~i~A~-~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~ 362 (623)
T 3pl8_A 286 VVRNALNSEIESLHIHDLISGDRFEIKAD-VYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE--LLPSLGSYITEQSLV 362 (623)
T ss_dssp EEECTTSSCEEEEEEEETTTCCEEEECEE-EEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEE
T ss_pred EEEECCCCEEEEEEEEEcCCCcEEEEECC-EEEEcCCCcCCHHHHHhcCCCccccccccCCCC--CCcccccchhhCcCc
Confidence 99986556999999996 47888999996 999999999999999999999999999999999 999999999999999
Q ss_pred ccEEEEeeCCCCC-------------c-cc--------------h--HHHHHHHHHcC-CCccccCCc-ccEEEEEeCCC
Q psy10663 297 FGLSYTFTKTPVS-------------S-YT--------------I--NEIIYEYLTQR-TGRFTDIGM-SNFIGYLDTDF 344 (572)
Q Consensus 297 ~~~~~~~~~~~~~-------------~-~~--------------~--~~~~~~~~~~~-~G~~~~~~~-~~~~~~~~~~~ 344 (572)
. +.+.+++..++ . .+ . ...+.+++... .+++...-. .+-..+....
T Consensus 363 ~-~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 440 (623)
T 3pl8_A 363 F-CQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQ- 440 (623)
T ss_dssp E-EEEEECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHHHHHHHHHHHHHCTTCCCSSCTTCCCCEEECCCB-
T ss_pred e-EEEEECCcccccccccccccccCCCcceecccccCcccccCCchhhhhhhhhhhccccccccccccccccccccccc-
Confidence 4 88887653100 0 00 0 00111111111 232211000 0000000000
Q ss_pred CCCCCeeEEeeccCCCchhhhhhhhccccCchhHHHHHhhcCCCCCeEE-EEEEecccCcceEEEecC--CCCCCCCeee
Q psy10663 345 KGNPDVAVTQYYFPAQDTLFLRGHLKAWNVNDDLVERFVKVNADKPILI-IGLVSLCPKAEGVVEINS--NDPTKNPTIR 421 (572)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~s~g~v~l~~--~d~~~~P~i~ 421 (572)
...| .+...... .+ ....+++.+.. .-.+. ....++.|.++|+|+|++ +|++|+|+++
T Consensus 441 ~~~~-~~~~~~~~---------~~-~~~~~~~~~~~--------~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g~P~~~ 501 (623)
T 3pl8_A 441 PSHP-WHTQIHRD---------AF-SYGAVQQSIDS--------RLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPT 501 (623)
T ss_dssp TTBC-EEEEEECC---------SC-CCSCCCCSSCG--------GGEEEEEEEECCCCCTTCEEEEEEEEECTTSSEEEE
T ss_pred ccCc-chhhhhhh---------hc-ccccccccccc--------ceEEEEEEEEeeccCCCCEEEECCCCcCCCCCceEE
Confidence 0000 00000000 00 00011111111 01222 335678999999999986 8999999999
Q ss_pred CCCCCCHH-HHHHHHHHHHHHHHHhcCccccccccccccccccccccCCCCCHHHHHHHHHhccCCCccccccccccCCC
Q psy10663 422 YPLYTEEE-DIKNILTAVKMVDRVMKYRDFKNFQTNSVQLEIKECAKCKYQSEEYYRCAIKYLSTTTNHPTGTLRMGPPS 500 (572)
Q Consensus 422 ~~y~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~~~ 500 (572)
++|..+++ |++.+.++++.+++++++.+....... +. .. ...+++|++||||||.++
T Consensus 502 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~------~~-----~~-----------~~~~~~H~~gt~~mg~~~ 559 (623)
T 3pl8_A 502 FDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSL------PQ-----FM-----------EPGLVLHLGGTHRMGFDE 559 (623)
T ss_dssp EECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSC------SE-----EC-----------CTTTTCCCBCTTCBCSST
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCch------hh-----cc-----------CCCCcccCCCceeCCCCC
Confidence 99999999 999999999999999886543321110 00 00 134689999999999862
Q ss_pred CCCCcc-CCCCceeccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCCCCcccccee
Q psy10663 501 DPLAVV-GPDFRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPVNVTTVTKTT 562 (572)
Q Consensus 501 d~~~VV-D~~~rV~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~~~~~~~~~~ 562 (572)
..+||| |++|||||++||||+|+|+||+++++||++||||||+|+||+|+++++...+.+++
T Consensus 560 ~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~~~~~~~~ 622 (623)
T 3pl8_A 560 KEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPFTSEA 622 (623)
T ss_dssp TTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCCCCC----
T ss_pred CCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhcCCCCccc
Confidence 337997 99999999999999999999999999999999999999999999999888777654
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.35 E-value=5e-06 Score=88.74 Aligned_cols=65 Identities=28% Similarity=0.384 Sum_probs=51.2
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcch-hhHHHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN-SVRILQQ 263 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~-Tp~LLl~ 263 (572)
.|...+.+.|++|++++.|++|+.++ +++++||++. .+|+.++|+|+|.||||+|++. ++.+|..
T Consensus 207 ~L~~~~~~~Gv~i~~~t~v~~L~~~~-~g~v~GV~~~-~~g~~~~i~A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 207 PLVETAEKLGVRAEYDMRVQTLVTDD-TGRVVGIVAK-QYGKEVAVRARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEECT-TCCEEEEEEE-ETTEEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHHcCCEEEecCEeEEEEECC-CCcEEEEEEE-ECCcEEEEEeCCeEEEeCCChhhCHHHHHH
Confidence 34333445699999999999999875 3789999988 4677789999659999999998 5665543
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.56 E-value=0.00028 Score=76.12 Aligned_cols=63 Identities=22% Similarity=0.289 Sum_probs=49.5
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.|.....+.+++|++++.|++|+.++ .++++||.+.+.+|+..+++|+ .||||+|++...+=|
T Consensus 255 ~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~A~-~VVlAtGg~s~~~~~ 317 (566)
T 1qo8_A 255 TLRKAAKEQGIDTRLNSRVVKLVVND-DHSVVGAVVHGKHTGYYMIGAK-SVVLATGGYGMNKEM 317 (566)
T ss_dssp HHHHHHHHTTCCEECSEEEEEEEECT-TSBEEEEEEEETTTEEEEEEEE-EEEECCCCCTTCHHH
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEECC-CCcEEEEEEEeCCCcEEEEEcC-EEEEecCCcccCHHH
Confidence 33333445689999999999999873 2789999998667888889995 999999998864333
No 14
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.77 E-value=0.013 Score=62.99 Aligned_cols=65 Identities=25% Similarity=0.250 Sum_probs=49.9
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchh-hHHHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS-VRILQQ 263 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~T-p~LLl~ 263 (572)
.|.....+.+++|++++.|++|+.++ .++++||++.+.+|+..+++|+ .||||+|.+.. +.+|..
T Consensus 260 ~L~~~~~~~gv~i~~~t~v~~l~~~~-~g~v~GV~~~~~~G~~~~i~A~-~VVlAtGg~~~~~~~~~~ 325 (572)
T 1d4d_A 260 VLWDNAVKRGTDIRLNSRVVRILEDA-SGKVTGVLVKGEYTGYYVIKAD-AVVIAAGGFAKNNERVSK 325 (572)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECS-EEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHHcCCeEEecCEEEEEEECC-CCeEEEEEEEeCCCcEEEEEcC-EEEEeCCCCccCHHHHHH
Confidence 33333445699999999999998873 2789999998667888889995 99999999874 555543
No 15
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=95.44 E-value=0.019 Score=61.83 Aligned_cols=63 Identities=19% Similarity=0.194 Sum_probs=49.4
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchh-hHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS-VRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~T-p~LL 261 (572)
.|.....+.+++|++++.|++|+.++ +++++||.+.+.+|+..+++|+ .||||+|.+.. +.++
T Consensus 260 ~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~a~-~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 260 VLYDNAVKRNIDLRMNTRGIEVLKDD-KGTVKGILVKGMYKGYYWVKAD-AVILATGGFAKNNERV 323 (571)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEECT-TSCEEEEEEEETTTEEEEEECS-EEEECCCCCTTCHHHH
T ss_pred HHHHHHHhcCCEEEeCCEeeEeEEcC-CCeEEEEEEEeCCCcEEEEECC-eEEEeCCCcccCHHHH
Confidence 34333455799999999999999874 2789999998557888889996 79999999875 4443
No 16
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.30 E-value=0.036 Score=60.06 Aligned_cols=54 Identities=13% Similarity=0.086 Sum_probs=46.5
Q ss_pred hcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchh
Q psy10663 201 IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 201 ~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~T 257 (572)
...+.|++|+.++.|++|+.+ +++++||.+.+ .+|+.++++|+ .||||+|++..
T Consensus 164 ~~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 218 (621)
T 2h88_A 164 RSLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAK-NTVIATGGYGR 218 (621)
T ss_dssp HHTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCcccc
Confidence 345689999999999999987 57999999886 47888899996 89999999875
No 17
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=94.87 E-value=0.057 Score=58.34 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=47.3
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhh
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSV 258 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp 258 (572)
++..+.+.+|++|+.++.|++|+.+ +++++||.+.+ .+|+.++++|+ .||||+|++...
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRAN-AVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECS-CEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCCccc
Confidence 3344444556999999999999987 47899998875 47877889996 899999998765
No 18
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=94.70 E-value=0.051 Score=58.41 Aligned_cols=60 Identities=10% Similarity=0.198 Sum_probs=48.7
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHHHHcC
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRILQQSG 265 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LLl~Sg 265 (572)
+.+.+++|+.++.|++|+.+ ++++.+|++.|. +|+..+|+|+ .||+|+|+. +..|+...|
T Consensus 198 a~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~w-s~~l~~~~g 258 (571)
T 2rgh_A 198 AAEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAK-LVINTSGPW-VDKVRNLNF 258 (571)
T ss_dssp HHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBS-CEEECCGGG-HHHHHTTCC
T ss_pred HHHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcC-EEEECCChh-HHHHHHhhc
Confidence 34579999999999999988 468999998864 5666789996 899999986 777765444
No 19
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=94.59 E-value=0.043 Score=59.19 Aligned_cols=53 Identities=19% Similarity=0.172 Sum_probs=44.7
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchh
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~T 257 (572)
.+.|++|+.++.|++|+.++ +++++||.+.+ .+|+.++++|+ .||||+|++..
T Consensus 154 ~~~gv~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGg~~~ 207 (588)
T 2wdq_A 154 LKNHTTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKAR-ATVLATGGAGR 207 (588)
T ss_dssp HHTTCEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HhCCCEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEcC-EEEECCCCCcc
Confidence 45699999999999999863 36899999876 47888889996 99999999865
No 20
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=94.58 E-value=0.063 Score=57.51 Aligned_cols=61 Identities=20% Similarity=0.182 Sum_probs=50.4
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
+...|++|+.+++|++|..+ +++++||++.|. +|+..+++|+ .||+|+|+ .+..|+...|+
T Consensus 180 a~~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~-~s~~l~~~~g~ 241 (561)
T 3da1_A 180 AVARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYAK-KVVNAAGP-WVDTLREKDRS 241 (561)
T ss_dssp HHHTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEE-EEEECCGG-GHHHHHHTTTC
T ss_pred HHHcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEECC-EEEECCCc-chHHHHHhcCC
Confidence 34579999999999999987 578999999864 6777899996 89999997 47777776654
No 21
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.49 E-value=0.045 Score=59.71 Aligned_cols=53 Identities=21% Similarity=0.218 Sum_probs=45.2
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchh
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~T 257 (572)
..+.|++|+.++.|++|+.+ +++++||.+.+ .+|+.++++|+ .||||+|++..
T Consensus 168 a~~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 221 (660)
T 2bs2_A 168 CLKLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVAK-GTLIATGGYGR 221 (660)
T ss_dssp HHHHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECS-EEEECCCCCGG
T ss_pred HHhCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEcC-EEEEccCcchh
Confidence 34569999999999999987 57999999875 47888889996 99999999874
No 22
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.16 E-value=0.038 Score=58.25 Aligned_cols=55 Identities=18% Similarity=0.230 Sum_probs=38.5
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQ 263 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~ 263 (572)
.++.+.+|++++.|++|+.+ +++++||++. +|+ ++.|+ .||++|+.-.|.+.|+-
T Consensus 231 ~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~--~g~--~~~ad-~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 231 FQDLGGEVVLNARVSHMETT--GNKIEAVHLE--DGR--RFLTQ-AVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHTTCEEECSCCEEEEEEE--TTEEEEEEET--TSC--EEECS-CEEECCC----------
T ss_pred HHHhCCceeeecceeEEEee--CCeEEEEEec--CCc--EEEcC-EEEECCCHHHHHHHhcc
Confidence 45678999999999999998 6899999886 665 56786 89999999988887764
No 23
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=93.88 E-value=0.063 Score=57.20 Aligned_cols=55 Identities=18% Similarity=0.256 Sum_probs=44.5
Q ss_pred cCCCCeEEeccceEEEEEEeCCC-----CEEEEEEEEc-CCCceeEeeccceeEeccCcchh
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETK-----TKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~-----~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~T 257 (572)
.+.+|++|+.++.|++|+.++++ +++.||.+.+ .+|+.++++|+ .||||+|++..
T Consensus 149 ~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~~ 209 (540)
T 1chu_A 149 LNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAK-AVVLATGGASK 209 (540)
T ss_dssp HHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECS-EEEECCCCCGG
T ss_pred HcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCccc
Confidence 33479999999999999984322 2899999986 36877889995 99999999864
No 24
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.80 E-value=0.059 Score=53.88 Aligned_cols=59 Identities=8% Similarity=0.118 Sum_probs=44.3
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHc-CC
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQS-GV 266 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~S-gI 266 (572)
+.+.+++|+++++|++|..+++ + ++.|.. .+|+..+++|+ .||+|+|+. |++|+... |+
T Consensus 160 ~~~~Gv~i~~~~~v~~i~~~~~-~-~~~v~~--~~g~~~~~~a~-~VV~A~G~~-s~~l~~~~~g~ 219 (369)
T 3dme_A 160 AESDGAQLVFHTPLIAGRVRPE-G-GFELDF--GGAEPMTLSCR-VLINAAGLH-APGLARRIEGI 219 (369)
T ss_dssp HHHTTCEEECSCCEEEEEECTT-S-SEEEEE--CTTSCEEEEEE-EEEECCGGG-HHHHHHTEETS
T ss_pred HHHCCCEEECCCEEEEEEEcCC-c-eEEEEE--CCCceeEEEeC-EEEECCCcc-hHHHHHHhcCC
Confidence 4557999999999999998743 2 233544 36766789996 899999985 77887665 53
No 25
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=93.40 E-value=0.067 Score=55.22 Aligned_cols=54 Identities=22% Similarity=0.294 Sum_probs=42.2
Q ss_pred hhcCCCCeEEeccc---eEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 200 AIKDKNTVQVSKNS---EVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 200 ~~~~~~nl~i~~~~---~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
..+.+.+++|++++ .|++|+.+ +++++||+.. +|+ +++|+ .||+|+|+. |++|+
T Consensus 169 ~~a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~--~G~--~i~Ad-~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 169 REAQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTA--DGK--IWRAE-RTFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHHHTTCEEEESTTTTCEEEEEEE--TTEEEEEEET--TTE--EEECS-EEEECCGGG-GGGTS
T ss_pred HHHHhcCCEEEeCCcCceEEEEEec--CCeEEEEEEC--CCC--EEECC-EEEECCCCC-hhhhc
Confidence 33455789999999 99999987 5788888775 554 68896 899999986 55554
No 26
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=93.09 E-value=0.14 Score=54.16 Aligned_cols=58 Identities=24% Similarity=0.382 Sum_probs=47.4
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcch
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN 256 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~ 256 (572)
.+|...+...|++|+.+++|++|..+ ++++++|.+.+.+|+..+++|+ .||+|.|.-.
T Consensus 115 ~~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~ad-~VI~AdG~~S 172 (512)
T 3e1t_A 115 DMLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHAR-FIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEEE-EEEECCCTTC
T ss_pred HHHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEcC-EEEECCCcch
Confidence 44544444579999999999999987 5789999998778887899996 8999999743
No 27
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=92.42 E-value=0.4 Score=46.16 Aligned_cols=53 Identities=15% Similarity=0.107 Sum_probs=41.3
Q ss_pred hhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc----------CCCceeEeeccceeEeccCc
Q psy10663 199 RAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN----------PQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 199 ~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~----------~~g~~~~v~A~k~VILaAGa 254 (572)
..+.+..|++|+.++.|++|..+ ++++.||.+.+ ..|+..+++|+ .||+|+|+
T Consensus 127 ~~~~~~~gv~i~~~~~V~~i~~~--~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad-~VV~AtG~ 189 (284)
T 1rp0_A 127 SKLLARPNVKLFNAVAAEDLIVK--GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAK-IVVSSCGH 189 (284)
T ss_dssp HHHHTSTTEEEEETEEEEEEEEE--TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEE-EEEECCCS
T ss_pred HHHHhcCCCEEEcCcEEEEEEec--CCeEEEEEEeccccccccCccccCceEEEECC-EEEECCCC
Confidence 33445579999999999999987 47888998752 12455789996 89999996
No 28
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=92.22 E-value=0.12 Score=56.34 Aligned_cols=51 Identities=18% Similarity=0.116 Sum_probs=42.3
Q ss_pred Ce-EEeccceEEEEEEeCC-CCEEEEEEEEc-CCCceeEeeccceeEeccCcchh
Q psy10663 206 TV-QVSKNSEVTKLCFDET-KTKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 206 nl-~i~~~~~V~~i~~~~~-~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~T 257 (572)
|+ +|+.++.|++|+.+++ .++++||.+.+ .+|+.++++|+ .||||+|++..
T Consensus 166 gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGG~~~ 219 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAK-AVILATGGATL 219 (643)
T ss_dssp CGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred CCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcC-EEEECCCcccc
Confidence 89 9999999999998741 13999998865 46777789995 99999999875
No 29
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=91.92 E-value=0.15 Score=52.29 Aligned_cols=53 Identities=15% Similarity=0.217 Sum_probs=43.2
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 262 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl 262 (572)
....+.+|++++.|++|..+ ++++++|.. +|+ +++|+ .||+|+++-.+.+||-
T Consensus 206 ~~~~G~~i~~~~~V~~i~~~--~~~~~gv~~---~g~--~~~ad-~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 206 ISANGGKIHTGQEVSKILIE--NGKAAGIIA---DDR--IHDAD-LVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHTTCEEECSCCEEEEEEE--TTEEEEEEE---TTE--EEECS-EEEECSCHHHHHHHTT
T ss_pred HHHcCCEEEECCceeEEEEE--CCEEEEEEE---CCE--EEECC-EEEECCCHHHHHHhcC
Confidence 44568999999999999998 578888865 343 67896 8999999999988664
No 30
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=91.81 E-value=0.12 Score=56.47 Aligned_cols=51 Identities=18% Similarity=0.205 Sum_probs=43.0
Q ss_pred CeEEeccceEEEEEEeCC-CCEEEEEEEEc-CCCceeEeeccceeEeccCcchh
Q psy10663 206 TVQVSKNSEVTKLCFDET-KTKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~-~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~T 257 (572)
|++|+.++.|++|+.+++ .++++||.+.+ .+|+.+.++|+ .||||+|.++.
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak-~VVLATGG~g~ 234 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKAN-AMVVACGGAVN 234 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeC-EEEECCCcccc
Confidence 999999999999998742 14999998876 46888899995 99999999873
No 31
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.76 E-value=0.18 Score=50.74 Aligned_cols=55 Identities=20% Similarity=0.298 Sum_probs=42.1
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcC
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 265 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~Sg 265 (572)
+.+.+++|+.++.|++|..+ ++++++|+.. +| +++|+ .||+|+|+. |+.|+...|
T Consensus 159 ~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~--~g---~i~a~-~VV~A~G~~-s~~l~~~~g 213 (382)
T 1y56_B 159 AKEYGAKLLEYTEVKGFLIE--NNEIKGVKTN--KG---IIKTG-IVVNATNAW-ANLINAMAG 213 (382)
T ss_dssp HHHTTCEEECSCCEEEEEES--SSBEEEEEET--TE---EEECS-EEEECCGGG-HHHHHHHHT
T ss_pred HHHCCCEEECCceEEEEEEE--CCEEEEEEEC--Cc---EEECC-EEEECcchh-HHHHHHHcC
Confidence 44578999999999999887 4678787653 44 68896 899999985 666665544
No 32
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=91.36 E-value=0.28 Score=50.85 Aligned_cols=58 Identities=17% Similarity=0.129 Sum_probs=45.3
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcch
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSIN 256 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~ 256 (572)
.+|...+...+++|+.+++|++|..+ +++++||.+.+. +|+..+++|+ .||.|.|+-.
T Consensus 104 ~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~ad-~VV~AdG~~s 162 (453)
T 3atr_A 104 QRVLKEAQDRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYSK-VVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECS-EEEECCGGGC
T ss_pred HHHHHHHHHcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEcC-EEEECcCCch
Confidence 34433334478999999999999987 578999988755 7777789996 8999999743
No 33
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=91.31 E-value=0.28 Score=50.72 Aligned_cols=51 Identities=18% Similarity=0.318 Sum_probs=41.3
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
..+.+++|++++.|++|..+ ++++.+|++. +|+ +++|+ .||+|+|+...|.
T Consensus 144 ~~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~--~G~--~i~Ad-~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 144 LKDLGVKIRTNTPVETIEYE--NGQTKAVILQ--TGE--VLETN-HVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHTTCEEECSCCEEEEEEE--TTEEEEEEET--TCC--EEECS-CEEECCCCSSSGG
T ss_pred HHHCCCEEEeCcEEEEEEec--CCcEEEEEEC--CCC--EEECC-EEEECCCCCcCCC
Confidence 44579999999999999987 4677888764 554 58896 8999999988764
No 34
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=90.91 E-value=0.32 Score=51.20 Aligned_cols=56 Identities=16% Similarity=0.091 Sum_probs=44.7
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQ 262 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LLl 262 (572)
+...+++|+.+++|++|..+ + ++.+|.+.| .+|+..+++|+ .||+|+|+. +..|+-
T Consensus 159 a~~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A~-~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 159 VVRKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQAR-GLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEES-CEEECCGGG-HHHHHH
T ss_pred HHHcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEECC-EEEECCChh-HHHHHH
Confidence 34568999999999999987 3 577888875 36777889996 899999986 666654
No 35
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=90.59 E-value=0.24 Score=51.10 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=41.6
Q ss_pred cCCCCeEEeccceEEEEEEeC-------------CCCEEEEEEEEcCCCceeEe--eccceeEeccCcchhhHHHHHcC
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDE-------------TKTKVTGVEFRNPQGKTIKV--NANREVVLAANSINSVRILQQSG 265 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~-------------~~~~a~gV~~~~~~g~~~~v--~A~k~VILaAGai~Tp~LLl~Sg 265 (572)
+.+.+++|+.+++|++|..+. +++++.+|+.. +| ++ +|+ .||+|+|+. |++|+-..|
T Consensus 191 ~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~--~g---~i~~~Ad-~VV~AtG~~-s~~l~~~~g 262 (448)
T 3axb_A 191 ASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLS--DG---TRVEVGE-KLVVAAGVW-SNRLLNPLG 262 (448)
T ss_dssp HHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEET--TS---CEEEEEE-EEEECCGGG-HHHHHGGGT
T ss_pred HHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeC--CC---EEeecCC-EEEECCCcC-HHHHHHHcC
Confidence 445789999999999998720 14567777653 45 57 896 899999985 777765444
No 36
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=90.22 E-value=0.5 Score=45.75 Aligned_cols=63 Identities=17% Similarity=0.246 Sum_probs=50.0
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 262 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl 262 (572)
++..+.+..++++++++.|.+|.-+ ++++.+|.+...+|+..++.++ .||+|.|..-++.+|-
T Consensus 188 ~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~~v~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~ 250 (315)
T 3r9u_A 188 TVEKVKKNEKIELITSASVDEVYGD--KMGVAGVKVKLKDGSIRDLNVP-GIFTFVGLNVRNEILK 250 (315)
T ss_dssp HHHHHHHCTTEEEECSCEEEEEEEE--TTEEEEEEEECTTSCEEEECCS-CEEECSCEEECCGGGB
T ss_pred HHHHHHhcCCeEEEeCcEEEEEEcC--CCcEEEEEEEcCCCCeEEeecC-eEEEEEcCCCCchhhh
Confidence 4444445789999999999999876 4688899887557888889997 8999999876666543
No 37
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=90.17 E-value=0.78 Score=44.45 Aligned_cols=67 Identities=24% Similarity=0.318 Sum_probs=52.2
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
.++..+.+..++++++++.|++|.-+ +++.+|++.+ .+|+..++.++ .||+|.|..-+..+|..+|+
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGD---KVVKQVVVENLKTGEIKELNVN-GVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECS-EEEECCCEECCHHHHHHTTC
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEecc---CceeEEEEEECCCCceEEEEcC-EEEEEECCCCChhHHhhcCe
Confidence 34455556679999999999999765 4677888875 35877789997 89999998777778777664
No 38
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=89.54 E-value=0.37 Score=48.75 Aligned_cols=55 Identities=33% Similarity=0.438 Sum_probs=41.6
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcC
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 265 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~Sg 265 (572)
..+.+++|+.++.|++|..+ ++++++|+.. +| +++|+ .||+|+|+. ++.|+...|
T Consensus 184 ~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~--~g---~~~a~-~vV~a~G~~-s~~l~~~~g 238 (405)
T 2gag_B 184 ANEMGVDIIQNCEVTGFIKD--GEKVTGVKTT--RG---TIHAG-KVALAGAGH-SSVLAEMAG 238 (405)
T ss_dssp HHHTTCEEECSCCEEEEEES--SSBEEEEEET--TC---CEEEE-EEEECCGGG-HHHHHHHHT
T ss_pred HHHCCCEEEcCCeEEEEEEe--CCEEEEEEeC--Cc---eEECC-EEEECCchh-HHHHHHHcC
Confidence 44578999999999999887 4667777653 45 68896 899999985 556665544
No 39
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=88.80 E-value=0.45 Score=47.92 Aligned_cols=57 Identities=23% Similarity=0.236 Sum_probs=44.0
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcch
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN 256 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~ 256 (572)
.+|...+.+.|++|+.+++|++|..+ +++++||.+. ..+...+++|+ .||.|.|+-.
T Consensus 106 ~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~-~~~~~~~~~a~-~vV~A~G~~s 162 (397)
T 3cgv_A 106 KHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIR-HNNEIVDVRAK-MVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEE-ETTEEEEEEEE-EEEECCCTTC
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEE-ECCeEEEEEcC-EEEECCCcch
Confidence 44444344579999999999999988 5789999887 34556789996 8999999643
No 40
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=88.23 E-value=0.79 Score=44.33 Aligned_cols=58 Identities=19% Similarity=0.347 Sum_probs=45.8
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQ 262 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LLl 262 (572)
.+..+++|++++.|++|.-+ ++++.+|++.+ .+|++.++.++ .||+|.|..-++.+|.
T Consensus 190 ~~~~gv~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 190 RSLKNVDIILNAQTTEVKGD--GSKVVGLEYRDRVSGDIHNIELA-GIFVQIGLLPNTNWLE 248 (310)
T ss_dssp HTCTTEEEESSEEEEEEEES--SSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT
T ss_pred hhCCCeEEecCCceEEEEcC--CCcEEEEEEEECCCCcEEEEEcC-EEEEeeCCccCchHHh
Confidence 34479999999999999755 46788999885 35777889997 8999999876666653
No 41
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=88.10 E-value=0.49 Score=47.26 Aligned_cols=54 Identities=24% Similarity=0.115 Sum_probs=39.6
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcC
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 265 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~Sg 265 (572)
+.+.+++|+.++.|++|..++ +. ++|+. .+| +++|+ .||+|+|+ .|+.|+...|
T Consensus 164 a~~~Gv~i~~~~~V~~i~~~~--~~-~~V~t--~~g---~i~a~-~VV~A~G~-~s~~l~~~~g 217 (381)
T 3nyc_A 164 IRRNQGQVLCNHEALEIRRVD--GA-WEVRC--DAG---SYRAA-VLVNAAGA-WCDAIAGLAG 217 (381)
T ss_dssp HHHTTCEEESSCCCCEEEEET--TE-EEEEC--SSE---EEEES-EEEECCGG-GHHHHHHHHT
T ss_pred HHHCCCEEEcCCEEEEEEEeC--Ce-EEEEe--CCC---EEEcC-EEEECCCh-hHHHHHHHhC
Confidence 445689999999999999874 44 34433 344 68896 89999997 4677766544
No 42
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=87.54 E-value=0.6 Score=45.47 Aligned_cols=60 Identities=28% Similarity=0.460 Sum_probs=47.7
Q ss_pred CCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 204 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 204 ~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
..+++|++++.|++|.-+ ++++.+|.+.+ .+|+..++.++ .||+|.|..-++.+|..+|+
T Consensus 202 ~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGD--GKKVTGVKYKDRTTGEEKLIETD-GVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HTTCCEECSEEEEEEEES--SSSEEEEEEEETTTCCEEEECCS-EEEECCCEEECCGGGTTSCC
T ss_pred cCCcEEEcCCeEEEEecC--CceEEEEEEEEcCCCceEEEecC-EEEEeeCCccChHHHhhccc
Confidence 579999999999999865 45688888874 36777789996 89999998877777655543
No 43
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=87.49 E-value=0.72 Score=46.86 Aligned_cols=64 Identities=19% Similarity=0.356 Sum_probs=50.4
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 267 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgIG 267 (572)
++....++.++++++++.|++|..+ ++++++|++. +|+ ++.++ .||+|+|..-+..||..+|+-
T Consensus 189 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~--dG~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 189 YFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLS--DGN--TLPCD-LVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEET--TSC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeC--CCC--EEEcC-EEEECcCCccCHHHHHhCCCC
Confidence 4444455689999999999999876 4788888875 565 57787 899999998777888777753
No 44
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=87.00 E-value=0.84 Score=44.61 Aligned_cols=62 Identities=8% Similarity=0.178 Sum_probs=47.9
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++..+.+..++++++++.|.+|.-+ ++++++|.+.+. +|+..++.++ .||+|.|..-++.+|
T Consensus 214 ~~~~l~~~~gv~i~~~~~v~~i~~~--~~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 214 MQKRAEKNEKIEILYNTVALEAKGD--GKLLNALRIKNTKKNEETDLPVS-GLFYAIGHTPATKIV 276 (338)
T ss_dssp HHHHHHHCTTEEEECSEEEEEEEES--SSSEEEEEEEETTTTEEEEEECS-EEEECSCEEECCGGG
T ss_pred HHHHHHhcCCeEEeecceeEEEEcc--cCcEEEEEEEECCCCceEEEEeC-EEEEEeCCCCChhHh
Confidence 3444344569999999999999876 467889998853 5666789997 899999987766655
No 45
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=86.99 E-value=0.72 Score=47.03 Aligned_cols=65 Identities=25% Similarity=0.340 Sum_probs=50.7
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCCC
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 267 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgIG 267 (572)
.++....+..+++|++++.|++|..+ ++++++|++. +|+ ++.++ .||+|+|..-+..+|..+|+-
T Consensus 198 ~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~--dG~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 198 EFYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQ--DGS--VIPAD-IVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEES--SSC--EEECS-EEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeC--CCC--EEEcC-EEEECCCCccChHHHHhCCCC
Confidence 34444455689999999999999875 4688888875 564 57787 899999998888888777753
No 46
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=86.28 E-value=1.5 Score=43.27 Aligned_cols=61 Identities=15% Similarity=0.190 Sum_probs=44.6
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCC-----------------CCEEEEEEEEc----CCC------ceeEeecccee
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDET-----------------KTKVTGVEFRN----PQG------KTIKVNANREV 248 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~-----------------~~~a~gV~~~~----~~g------~~~~v~A~k~V 248 (572)
.++..+.+.+|++|+.++.|+.|+.+++ +.++.||.+.. .+| ...+|+|+ .|
T Consensus 165 ~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak-~V 243 (344)
T 3jsk_A 165 TVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAP-VI 243 (344)
T ss_dssp HHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECS-EE
T ss_pred HHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcC-EE
Confidence 3444455558999999999999998752 12899998742 233 34789996 99
Q ss_pred EeccCcchh
Q psy10663 249 VLAANSINS 257 (572)
Q Consensus 249 ILaAGai~T 257 (572)
|+|.|.-..
T Consensus 244 V~ATG~~s~ 252 (344)
T 3jsk_A 244 ISTTGHDGP 252 (344)
T ss_dssp EECCCSSSS
T ss_pred EECCCCCch
Confidence 999997543
No 47
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=86.09 E-value=0.81 Score=46.51 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=40.7
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcc
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 255 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai 255 (572)
.+|...+.+.+++|+.++.|++|..++ +..+ |.+.+.+|+..+++|+ .||+|.|.-
T Consensus 110 ~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~~~-v~v~~~~g~~~~~~a~-~vV~A~G~~ 165 (421)
T 3nix_A 110 KTLADEAARQGVDVEYEVGVTDIKFFG--TDSV-TTIEDINGNKREIEAR-FIIDASGYG 165 (421)
T ss_dssp HHHHHHHHHHTCEEECSEEEEEEEEET--TEEE-EEEEETTSCEEEEEEE-EEEECCGGG
T ss_pred HHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEE-EEEEcCCCCEEEEEcC-EEEECCCCc
Confidence 344443444589999999999999884 3322 4555468888899996 899999964
No 48
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=85.80 E-value=0.85 Score=51.21 Aligned_cols=56 Identities=25% Similarity=0.263 Sum_probs=43.2
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
+.+.+++|+.++.|++|..+ ++++++|+.. +| +++|+ .||+|+|+. ++.|+...|+
T Consensus 161 a~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~--~G---~i~Ad-~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 161 TESAGVTYRGSTTVTGIEQS--GGRVTGVQTA--DG---VIPAD-IVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHHTTCEEECSCCEEEEEEE--TTEEEEEEET--TE---EEECS-EEEECCGGG-HHHHHHTTTC
T ss_pred HHHcCCEEECCceEEEEEEe--CCEEEEEEEC--Cc---EEECC-EEEECCccc-hHHHHHHhCC
Confidence 44568999999999999987 4677777653 44 68996 899999985 5777665554
No 49
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=85.78 E-value=1.6 Score=43.25 Aligned_cols=61 Identities=18% Similarity=0.255 Sum_probs=46.8
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcC
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 265 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~Sg 265 (572)
.++.+++|++++.|++|..+ ++++.+|.+...+|+..++.++ .||+|.|..-++.+|..+|
T Consensus 212 ~~~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 212 RANGTIDVYLETEVASIEES--NGVLTRVHLRSSDGSKWTVEAD-RLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp HHHTSEEEESSEEEEEEEEE--TTEEEEEEEEETTCCEEEEECS-EEEECCCBCCSCGGGGGSS
T ss_pred hhcCceEEEcCcCHHHhccC--CCceEEEEEEecCCCeEEEeCC-EEEECCCCCCCHHHHHhhc
Confidence 34568999999999999876 4678888886447777788997 8999999665555655444
No 50
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=85.50 E-value=1.2 Score=43.12 Aligned_cols=57 Identities=16% Similarity=0.285 Sum_probs=45.0
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-C-CceeEeeccceeEeccCcchhhHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-Q-GKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~-g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.++.+++|++++.|++|..+ ++++.+|++.+. + |+..++.++ .||+|.|..-++.+|
T Consensus 194 l~~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 194 VENGNIILHTNRTLEEVTGD--QMGVTGVRLRDTQNSDNIESLDVA-GLFVAIGHSPNTAIF 252 (320)
T ss_dssp HHTSSEEEECSCEEEEEEEC--SSSEEEEEEECCTTCCCCEEEECS-EEEECSCEEESCGGG
T ss_pred cccCCeEEEcCceeEEEEcC--CCceEEEEEEeccCCCceEEEEcC-EEEEEeCCCCChHHh
Confidence 45679999999999999866 457888998843 3 666788997 899999987666654
No 51
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=85.05 E-value=0.76 Score=49.36 Aligned_cols=50 Identities=18% Similarity=0.326 Sum_probs=38.6
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
+.+|++|+ ++.|+.|..+ +++++||... +|. +++|+ .||+|+|+.-..++
T Consensus 135 ~~~GVeI~-~~~Vt~L~~e--~g~V~GV~t~--dG~--~i~Ad-aVVLATG~~s~~~~ 184 (637)
T 2zxi_A 135 NQENLYIK-QEEVVDIIVK--NNQVVGVRTN--LGV--EYKTK-AVVVTTGTFLNGVI 184 (637)
T ss_dssp TCTTEEEE-ESCEEEEEES--SSBEEEEEET--TSC--EEECS-EEEECCTTCBTCEE
T ss_pred hCCCCEEE-EeEEEEEEec--CCEEEEEEEC--CCc--EEEeC-EEEEccCCCccCce
Confidence 34799994 7899999887 4788899775 563 68895 89999998755443
No 52
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=84.80 E-value=1.4 Score=44.48 Aligned_cols=51 Identities=24% Similarity=0.311 Sum_probs=36.2
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 262 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl 262 (572)
+.+.+++|+.++.|++|..++ +.+ .+...+| +++|+ .||+|+|+. ++.|+-
T Consensus 163 a~~~Gv~i~~~~~V~~i~~~~--~~v---~v~t~~g---~i~a~-~VV~A~G~~-s~~l~~ 213 (397)
T 2oln_A 163 AQAAGATLRAGETVTELVPDA--DGV---SVTTDRG---TYRAG-KVVLACGPY-TNDLLE 213 (397)
T ss_dssp HHHTTCEEEESCCEEEEEEET--TEE---EEEESSC---EEEEE-EEEECCGGG-HHHHHG
T ss_pred HHHcCCEEECCCEEEEEEEcC--CeE---EEEECCC---EEEcC-EEEEcCCcC-hHHHhh
Confidence 345689999999999999873 433 3332233 68896 899999984 556553
No 53
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=84.03 E-value=2.2 Score=39.35 Aligned_cols=50 Identities=24% Similarity=0.367 Sum_probs=37.9
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
+.++++|+ +++|++|..+ ++++.+|... +|+ +++|+ .||+|+|..-..++
T Consensus 80 ~~~gv~i~-~~~v~~i~~~--~~~v~~v~~~--~g~--~i~a~-~VV~A~G~~s~~~~ 129 (232)
T 2cul_A 80 GLRPLHLF-QATATGLLLE--GNRVVGVRTW--EGP--PARGE-KVVLAVGSFLGARL 129 (232)
T ss_dssp TCTTEEEE-ECCEEEEEEE--TTEEEEEEET--TSC--CEECS-EEEECCTTCSSCEE
T ss_pred cCCCcEEE-EeEEEEEEEe--CCEEEEEEEC--CCC--EEECC-EEEECCCCChhhce
Confidence 33599999 6799999887 4677777653 554 67896 89999999655554
No 54
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=83.99 E-value=1.1 Score=47.59 Aligned_cols=49 Identities=20% Similarity=0.326 Sum_probs=39.0
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchh
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~T 257 (572)
....+++|+.++.|++|..+ ++++.+|.+. +|+ ++.|+ .||+|.|+-..
T Consensus 230 l~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~--~G~--~i~Ad-~VVlA~G~~s~ 278 (549)
T 3nlc_A 230 IIELGGEIRFSTRVDDLHME--DGQITGVTLS--NGE--EIKSR-HVVLAVGHSAR 278 (549)
T ss_dssp HHHTTCEEESSCCEEEEEES--SSBEEEEEET--TSC--EEECS-CEEECCCTTCH
T ss_pred HHhcCCEEEeCCEEEEEEEe--CCEEEEEEEC--CCC--EEECC-EEEECCCCChh
Confidence 34469999999999999987 4678888775 554 58896 89999998553
No 55
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=83.97 E-value=2.2 Score=41.81 Aligned_cols=58 Identities=14% Similarity=0.112 Sum_probs=40.5
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCC--CC--EEEEEEEEc----CCC------ceeEeec--------------ccee
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDET--KT--KVTGVEFRN----PQG------KTIKVNA--------------NREV 248 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~--~~--~a~gV~~~~----~~g------~~~~v~A--------------~k~V 248 (572)
.+..+.+.+|++|+.++.|+.|+.+++ ++ +++||.+.. .+| ...+|.| .+.|
T Consensus 152 L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~V 231 (326)
T 2gjc_A 152 VLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVI 231 (326)
T ss_dssp HHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEE
T ss_pred HHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEE
Confidence 334445568999999999999998752 14 899998741 233 3467888 2389
Q ss_pred EeccCc
Q psy10663 249 VLAANS 254 (572)
Q Consensus 249 ILaAGa 254 (572)
|+|.|.
T Consensus 232 V~ATG~ 237 (326)
T 2gjc_A 232 LSTTGH 237 (326)
T ss_dssp EECCCC
T ss_pred EECcCC
Confidence 999994
No 56
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=83.96 E-value=1.4 Score=46.57 Aligned_cols=67 Identities=16% Similarity=0.291 Sum_probs=47.7
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH-HHHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR-ILQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~-LLl~SgI 266 (572)
++....++.+++|++++.|++|..++ ++++.++.+...+|+ .++.++ .||+|+|..-+.. +|..+|+
T Consensus 260 ~l~~~l~~~GV~i~~~~~V~~i~~~~-~~~v~~~~v~~~~G~-~~i~aD-~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 260 YVLDRMKEQGMEIISGSNVTRIEEDA-NGRVQAVVAMTPNGE-MRIETD-FVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEECT-TSBEEEEEEEETTEE-EEEECS-CEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEEcC-CCceEEEEEEECCCc-EEEEcC-EEEECcCCccCCccCHHHcCC
Confidence 44444456799999999999998754 356655555534554 478897 8999999877666 6666664
No 57
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=83.91 E-value=1.1 Score=48.01 Aligned_cols=61 Identities=15% Similarity=0.293 Sum_probs=45.6
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc----CCCce-------eEeeccceeEeccCcchhh
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN----PQGKT-------IKVNANREVVLAANSINSV 258 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~----~~g~~-------~~v~A~k~VILaAGai~Tp 258 (572)
.+|...+...+++|+.++.|++|+.+++ ++++||.+.+ .+|+. .+++|+ .||+|.|+-..-
T Consensus 148 ~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad-~VV~AdG~~S~v 219 (584)
T 2gmh_A 148 SWMGEQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHAK-VTIFAEGCHGHL 219 (584)
T ss_dssp HHHHHHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEECS-EEEECCCTTCHH
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEECC-EEEEeeCCCchH
Confidence 4444434445999999999999998753 6788998764 35653 578996 999999987653
No 58
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=83.81 E-value=2 Score=41.43 Aligned_cols=65 Identities=12% Similarity=0.145 Sum_probs=48.6
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHHHHc
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQS 264 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LLl~S 264 (572)
++..+.+..+++|++++.|.+|.-+ ++++.+|.+.+ .+|++.++.++ .||+|.|..-+..+|-.+
T Consensus 184 ~~~~l~~~~gv~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 184 TLEHAKNNDKIEFLTPYVVEEIKGD--ASGVSSLSIKNTATNEKRELVVP-GFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp HHHHHHTCTTEEEETTEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECS-EEEECSCEEECCGGGBCT
T ss_pred HHHHHhhCCCeEEEeCCEEEEEECC--CCcEeEEEEEecCCCceEEEecC-EEEEEecCccChhhhhcc
Confidence 3334344579999999999999876 35777888874 26777789997 899999987666665443
No 59
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=83.50 E-value=1.8 Score=42.08 Aligned_cols=61 Identities=13% Similarity=0.204 Sum_probs=46.5
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++..+.+..+++|++++.|++|.-+ +++.+|++.+ .+|+..++.++ .||+|.|..-+..+|
T Consensus 193 ~~~~l~~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l 254 (325)
T 2q7v_A 193 AQARAFANPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELATD-GVFIFIGHVPNTAFV 254 (325)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred HHHHHHhcCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEcC-EEEEccCCCCChHHH
Confidence 3344445679999999999999764 4677888874 36777789997 899999987666655
No 60
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=83.07 E-value=2.3 Score=41.38 Aligned_cols=61 Identities=16% Similarity=0.234 Sum_probs=46.8
Q ss_pred hhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHH
Q psy10663 200 AIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 200 ~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.+.+..+++|++++.|++|.-++++.++.+|++.+. +|+..++.++ .||+|.|..-+..+|
T Consensus 203 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVS-GLFFAIGHEPATKFL 264 (333)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred HHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecC-EEEEEeCCccchHHh
Confidence 334678999999999999986632127888888753 6777789997 899999987776655
No 61
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=83.01 E-value=0.99 Score=49.34 Aligned_cols=52 Identities=15% Similarity=0.170 Sum_probs=37.8
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 262 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl 262 (572)
+.+.+++|+.++.|++|+.++ +++ +|+. .+|. +++|+ .||+|+|+. ++.|+.
T Consensus 427 a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t--~~G~--~i~Ad-~VVlAtG~~-s~~l~~ 478 (676)
T 3ps9_A 427 AQQQGLQIYYQYQLQNFSRKD--DCW-LLNF--AGDQ--QATHS-VVVLANGHQ-ISRFSQ 478 (676)
T ss_dssp HHHTTCEEEESCCEEEEEEET--TEE-EEEE--TTSC--EEEES-EEEECCGGG-GGCSTT
T ss_pred HHhCCCEEEeCCeeeEEEEeC--CeE-EEEE--CCCC--EEECC-EEEECCCcc-hhcccc
Confidence 345689999999999999884 442 4443 3554 48896 899999986 665543
No 62
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=82.74 E-value=0.98 Score=48.47 Aligned_cols=55 Identities=18% Similarity=0.244 Sum_probs=43.2
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
.+|...+...|++|+.+++|++|..+ ++.+++|.+.+ +|+..+++|+ .||.|.|+
T Consensus 132 ~~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~-~G~~~~i~Ad-lVV~AdG~ 186 (591)
T 3i3l_A 132 KLLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRR-GGESVTVESD-FVIDAGGS 186 (591)
T ss_dssp HHHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEE-TTEEEEEEES-EEEECCGG
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEec-CCceEEEEcC-EEEECCCC
Confidence 44544445579999999999999887 35577888773 7777889996 89999997
No 63
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=82.56 E-value=1.2 Score=45.46 Aligned_cols=50 Identities=12% Similarity=0.214 Sum_probs=39.4
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
....+.+|++++.|++|..+ ++++ | . .+|+ +++|+ .||+|+|+-.+++||
T Consensus 199 ~~~~G~~i~~~~~V~~i~~~--~~~v--V--~-~~g~--~~~ad-~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 199 IMENKGKILTRKEVVEINIE--EKKV--Y--T-RDNE--EYSFD-VAISNVGVRETVKLI 248 (421)
T ss_dssp HHTTTCEEESSCCEEEEETT--TTEE--E--E-TTCC--EEECS-EEEECSCHHHHHHHH
T ss_pred HHHCCCEEEcCCeEEEEEEE--CCEE--E--E-eCCc--EEEeC-EEEECCCHHHHHHhc
Confidence 45568999999999999876 4555 3 3 3554 57886 899999999988876
No 64
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=82.28 E-value=2 Score=45.22 Aligned_cols=55 Identities=22% Similarity=0.329 Sum_probs=44.8
Q ss_pred CCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHH
Q psy10663 204 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 204 ~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.+|++|++++.|++|.-+ ++++++|.+.+ .+|++.++.++ .||+|.|..-+..+|
T Consensus 403 ~~gV~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 403 LKNVDIILNAQTTEVKGD--GSKVVGLEYRDRVSGDIHSVALA-GIFVQIGLLPNTHWL 458 (521)
T ss_dssp CTTEEEECSEEEEEEEEC--SSSEEEEEEEETTTCCEEEEECS-EEEECCCEEESCGGG
T ss_pred CCCcEEEeCCEEEEEEcC--CCcEEEEEEEeCCCCceEEEEcC-EEEECcCCCCCchHH
Confidence 379999999999999765 46788999986 36777889997 899999987665555
No 65
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=82.20 E-value=0.86 Score=45.60 Aligned_cols=57 Identities=21% Similarity=0.181 Sum_probs=39.9
Q ss_pred HhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHc
Q psy10663 198 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQS 264 (572)
Q Consensus 198 l~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~S 264 (572)
|...+.+.+++|+.++.|++|..++ +++ +|.. .+| +++|+ .||+|+|+. ++.|+-..
T Consensus 170 l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~--~~g---~~~a~-~vV~A~G~~-s~~l~~~~ 226 (382)
T 1ryi_A 170 YVKAAKMLGAEIFEHTPVLHVERDG--EAL-FIKT--PSG---DVWAN-HVVVASGVW-SGMFFKQL 226 (382)
T ss_dssp HHHHHHHTTCEEETTCCCCEEECSS--SSE-EEEE--TTE---EEEEE-EEEECCGGG-THHHHHHT
T ss_pred HHHHHHHCCCEEEcCCcEEEEEEEC--CEE-EEEc--CCc---eEEcC-EEEECCChh-HHHHHHhc
Confidence 3333445689999999999998763 444 5543 244 68896 899999985 66665443
No 66
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=81.75 E-value=0.91 Score=47.27 Aligned_cols=48 Identities=17% Similarity=0.214 Sum_probs=38.3
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchh
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~T 257 (572)
++.|++|+.++.| +|+.+ ++++.||.+.+.+| +++|+ .||||+|+...
T Consensus 130 ~~~gv~i~~~~~v-~l~~~--~~~v~Gv~v~~~~g---~~~a~-~VVlAtGg~~~ 177 (472)
T 2e5v_A 130 REEGIPIIEDRLV-EIRVK--DGKVTGFVTEKRGL---VEDVD-KLVLATGGYSY 177 (472)
T ss_dssp HHTTCCEECCCEE-EEEEE--TTEEEEEEETTTEE---ECCCS-EEEECCCCCGG
T ss_pred HhCCCEEEECcEE-EEEEe--CCEEEEEEEEeCCC---eEEee-eEEECCCCCcc
Confidence 5679999999999 99887 47899998864333 36685 89999998753
No 67
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=81.20 E-value=1.7 Score=44.83 Aligned_cols=61 Identities=20% Similarity=0.212 Sum_probs=43.4
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEE--EEEEcCCCceeEeeccceeEeccCcchhhH
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTG--VEFRNPQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~g--V~~~~~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
.|+....++-+.+|..+++|++|..++++++... |...+..|+..++.++ .||||.|+ +|+
T Consensus 131 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d-~lVlAtG~--~p~ 193 (463)
T 3s5w_A 131 DYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTR-ALVVSPGG--TPR 193 (463)
T ss_dssp HHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEES-EEEECCCC--EEC
T ss_pred HHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeC-EEEECCCC--CCC
Confidence 5666555666789999999999998743355543 4444334666789996 89999997 554
No 68
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=80.52 E-value=1.1 Score=48.24 Aligned_cols=49 Identities=20% Similarity=0.354 Sum_probs=37.5
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
+.+|++| .++.|+.|..+ ++++++|... +| .+++|+ .||+|+|+.-..+
T Consensus 136 ~~~GV~I-~~~~V~~L~~e--~g~V~GV~t~--dG--~~I~Ad-~VVLATGt~s~~~ 184 (651)
T 3ces_A 136 NQPNLMI-FQQAVEDLIVE--NDRVVGAVTQ--MG--LKFRAK-AVVLTVGTFLDGK 184 (651)
T ss_dssp TCTTEEE-EECCEEEEEES--SSBEEEEEET--TS--EEEEEE-EEEECCSTTTCCE
T ss_pred hCCCCEE-EEEEEEEEEec--CCEEEEEEEC--CC--CEEECC-EEEEcCCCCccCc
Confidence 3379999 57899999887 4678898774 56 368895 8999999865433
No 69
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=80.24 E-value=1 Score=46.81 Aligned_cols=49 Identities=20% Similarity=0.340 Sum_probs=37.2
Q ss_pred hcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcc
Q psy10663 201 IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 255 (572)
Q Consensus 201 ~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai 255 (572)
+.+..|.+|++++.|++|+.++ +++++||+.. +|+ +++|+ .||+++|-+
T Consensus 265 ~~~~~Gg~i~l~t~V~~I~~d~-~g~v~gV~~~--~G~--~i~Ad-~VI~a~~~~ 313 (475)
T 3p1w_A 265 MCAINGGTFMLNKNVVDFVFDD-DNKVCGIKSS--DGE--IAYCD-KVICDPSYV 313 (475)
T ss_dssp HHHHC--CEESSCCEEEEEECT-TSCEEEEEET--TSC--EEEEE-EEEECGGGC
T ss_pred HHHHcCCEEEeCCeEEEEEEec-CCeEEEEEEC--CCc--EEECC-EEEECCCcc
Confidence 3456799999999999999943 4789999875 565 47896 899999876
No 70
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=78.64 E-value=1.7 Score=43.26 Aligned_cols=49 Identities=16% Similarity=0.224 Sum_probs=34.8
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
+.+.+++|+.++.|++|..++ +. +.|+. .+| +++|+ .||+|+|+. |+.|
T Consensus 159 ~~~~G~~i~~~~~V~~i~~~~--~~-~~v~~--~~g---~~~a~-~vV~a~G~~-s~~l 207 (372)
T 2uzz_A 159 AKEAGCAQLFNCPVTAIRHDD--DG-VTIET--ADG---EYQAK-KAIVCAGTW-VKDL 207 (372)
T ss_dssp HHHTTCEEECSCCEEEEEECS--SS-EEEEE--SSC---EEEEE-EEEECCGGG-GGGT
T ss_pred HHHCCCEEEcCCEEEEEEEcC--CE-EEEEE--CCC---eEEcC-EEEEcCCcc-HHhh
Confidence 445689999999999998874 32 23432 344 38896 899999974 5544
No 71
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=78.60 E-value=0.77 Score=48.15 Aligned_cols=62 Identities=11% Similarity=-0.023 Sum_probs=44.0
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
+|.....+.+++|+.++.|++|..+++++...+|.+.+. +|+..+++|+ .||+|.|+-..++
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad-~VV~A~G~~S~~r 233 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFD-VLISAAGGKFVPE 233 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBS-EEEECCCTTCCCT
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcC-EEEECCCCCcccc
Confidence 444434457999999999999987532234566777644 6655678996 8999999876654
No 72
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=78.09 E-value=1.7 Score=44.41 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=39.1
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
+|.....+.+++|+++++|++|..++ +. +.+...+| +++|+ .||+|+|+.-.|++
T Consensus 137 ~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~---~~V~~~~g---~i~ad-~VIlAtG~~S~p~~ 191 (417)
T 3v76_A 137 MLMAEMKEAGVQLRLETSIGEVERTA--SG---FRVTTSAG---TVDAA-SLVVASGGKSIPKM 191 (417)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEEET--TE---EEEEETTE---EEEES-EEEECCCCSSCGGG
T ss_pred HHHHHHHHCCCEEEECCEEEEEEEeC--CE---EEEEECCc---EEEee-EEEECCCCccCCCC
Confidence 33333445689999999999998874 32 33332344 78896 89999999877753
No 73
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=78.02 E-value=1.7 Score=43.44 Aligned_cols=50 Identities=12% Similarity=0.291 Sum_probs=35.4
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
+.+.+++|+.++.|++|..++ +. ..|+. .+| +++|+ .||+|+|+. +..|+
T Consensus 160 ~~~~Gv~i~~~~~v~~i~~~~--~~-~~v~~--~~g---~~~a~-~vV~A~G~~-~~~l~ 209 (389)
T 2gf3_A 160 AEARGAKVLTHTRVEDFDISP--DS-VKIET--ANG---SYTAD-KLIVSMGAW-NSKLL 209 (389)
T ss_dssp HHHTTCEEECSCCEEEEEECS--SC-EEEEE--TTE---EEEEE-EEEECCGGG-HHHHG
T ss_pred HHHCCCEEEcCcEEEEEEecC--Ce-EEEEe--CCC---EEEeC-EEEEecCcc-HHHHh
Confidence 445689999999999998874 22 22332 233 58896 899999984 55554
No 74
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=77.74 E-value=3.1 Score=40.53 Aligned_cols=65 Identities=15% Similarity=0.172 Sum_probs=47.7
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHHHHcC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRILQQSG 265 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LLl~Sg 265 (572)
.+....+..++++++++.|.+|.-+ +++.+|.+.+. +|+..++.++ .||+|.|.--...+|..+|
T Consensus 196 ~l~~~l~~~gv~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~ 261 (335)
T 2zbw_A 196 ELMKAHEEGRLEVLTPYELRRVEGD---ERVRWAVVFHNQTQEELALEVD-AVLILAGYITKLGPLANWG 261 (335)
T ss_dssp HHHHHHHTTSSEEETTEEEEEEEES---SSEEEEEEEETTTCCEEEEECS-EEEECCCEEEECGGGGGSC
T ss_pred HHHhccccCCeEEecCCcceeEccC---CCeeEEEEEECCCCceEEEecC-EEEEeecCCCCchHhhhcc
Confidence 3444445679999999999999763 45677887643 6776788997 8999999776655655444
No 75
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=77.68 E-value=2.6 Score=41.96 Aligned_cols=58 Identities=24% Similarity=0.249 Sum_probs=44.0
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhh
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSV 258 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp 258 (572)
.+|...+...+++++.++.|+.+..+ ++++++|... .+|+..+++|+ .||.|-|+ .|.
T Consensus 106 ~~L~~~a~~~G~~~~~~~~v~~~~~~--~~~~~~v~~~-~~~~~~~~~a~-~vIgAdG~-~S~ 163 (397)
T 3oz2_A 106 KHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIR-HNNEIVDVRAK-MVIAADGF-ESE 163 (397)
T ss_dssp HHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEE-ETTEEEEEEEE-EEEECCCT-TCH
T ss_pred HHHHHHHHhcCcEEeeeeeeeeeeec--cceeeeeeec-ccccceEEEEe-EEEeCCcc-ccH
Confidence 45544455679999999999999988 5788888877 57888899996 66666664 443
No 76
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=77.60 E-value=1.5 Score=48.04 Aligned_cols=53 Identities=17% Similarity=0.145 Sum_probs=37.2
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 262 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl 262 (572)
+.+.+++|+.++.|++|+.++ +. +.|+. .+|. .+++|+ .||+|+|+. ++.|+.
T Consensus 422 a~~~Gv~i~~~t~V~~l~~~~--~~-v~V~t--~~G~-~~i~Ad-~VVlAtG~~-s~~l~~ 474 (689)
T 3pvc_A 422 AQQNGMTCHYQHELQRLKRID--SQ-WQLTF--GQSQ-AAKHHA-TVILATGHR-LPEWEQ 474 (689)
T ss_dssp HHHTTCEEEESCCEEEEEECS--SS-EEEEE--C-CC-CCEEES-EEEECCGGG-TTCSTT
T ss_pred HHhCCCEEEeCCeEeEEEEeC--Ce-EEEEe--CCCc-EEEECC-EEEECCCcc-hhcccc
Confidence 345689999999999999875 33 24443 3443 257886 899999986 665543
No 77
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=75.73 E-value=3.4 Score=42.79 Aligned_cols=62 Identities=26% Similarity=0.351 Sum_probs=45.2
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
.+....++.+++|++++.|++|.-+ +++++ |.+. +|+ ++.++ .||+|+|..-++.||..+|+
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~-v~~~--~g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEGE--NGKVA-RVIT--DKR--TLDAD-LVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEES--SSBEE-EEEE--SSC--EEECS-EEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEcc--CCeEE-EEEe--CCC--EEEcC-EEEECCCCCcCHHHHHhCCc
Confidence 3444455689999999999999874 34554 5554 565 67887 89999998876667766665
No 78
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=74.20 E-value=3.2 Score=40.17 Aligned_cols=60 Identities=8% Similarity=0.150 Sum_probs=46.2
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
.+.++++++++.|.+|.-+ ++ ..+|.+.+ .+|+..++.++ .||+|.|..-++.+|..+|+
T Consensus 200 ~~~gv~~~~~~~v~~i~~~--~~-~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGE--DK-IEQLVLEEVKGDRKEILEID-DLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp HHSSCEEETTEEEEEEECS--SS-CCEEEEEETTSCCEEEEECS-EEEECCCEECCCGGGGGSSC
T ss_pred hcCCeEEEeCceeeEEecC--Cc-eEEEEEEecCCCceEEEECC-EEEEeeccCCCchHHhhcCc
Confidence 4579999999999999765 23 66788875 35667788997 89999998776777665553
No 79
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=74.15 E-value=1.5 Score=44.52 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=35.8
Q ss_pred HhhhcCCCCeEEeccceEE---------EEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHH-HcC
Q psy10663 198 LRAIKDKNTVQVSKNSEVT---------KLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ-QSG 265 (572)
Q Consensus 198 l~~~~~~~nl~i~~~~~V~---------~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl-~Sg 265 (572)
|...+...+++|+.++.|+ +|..+ ++++ +|+. .+| +++|+ .||+|+|+ .|+.|+- ..|
T Consensus 178 L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~--~~~v-~v~~--~~g---~i~a~-~VV~A~G~-~s~~l~~~~~g 245 (405)
T 3c4n_A 178 AAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT--NTHQ-IVVH--ETR---QIRAG-VIIVAAGA-AGPALVEQGLG 245 (405)
T ss_dssp HHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CB--CCE---EEEEE-EEEECCGG-GHHHHHHHHHC
T ss_pred HHHHHHHCCCEEEcCCEEEeccccccccceEee--CCeE-EEEE--CCc---EEECC-EEEECCCc-cHHHHHHHhcC
Confidence 3333445789999999999 77665 3444 4432 233 68896 89999998 4666665 444
No 80
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=72.27 E-value=4.1 Score=35.56 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=39.4
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
.++....++.+++++.+ +|++|..+++ + +.+...+| ++.++ .||+|.|.- |.++...|+
T Consensus 60 ~~l~~~~~~~gv~v~~~-~v~~i~~~~~-~----~~v~~~~g---~i~ad-~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 60 RRLEAHARRYGAEVRPG-VVKGVRDMGG-V----FEVETEEG---VEKAE-RLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHHHHHTTCEEEEC-CCCEEEECSS-S----EEEECSSC---EEEEE-EEEECCTTC--CHHHHHHTC
T ss_pred HHHHHHHHHcCCEEEeC-EEEEEEEcCC-E----EEEEECCC---EEEEC-EEEECCCCC--CCccccCCC
Confidence 34444445678999999 9999987642 2 23332355 68886 899999976 455555553
No 81
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=71.99 E-value=2.3 Score=41.65 Aligned_cols=58 Identities=14% Similarity=0.121 Sum_probs=41.1
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.|+....++.+++++.+++|++|..++ +...+| ...+| ++.++ .||+|.|+...|+++
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v--~~~~g---~~~~d-~vV~AtG~~~~~~~~ 137 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHFG--ERLRVV--ARDGR---QWLAR-AVISATGTWGEAYTP 137 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEET--TEEEEE--ETTSC---EEEEE-EEEECCCSGGGBCCC
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEECC--CcEEEE--EeCCC---EEEeC-EEEECCCCCCCCCCC
Confidence 455554556789999999999999873 443323 32344 68886 899999987776554
No 82
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=71.64 E-value=6.3 Score=42.36 Aligned_cols=49 Identities=16% Similarity=0.319 Sum_probs=37.3
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhh
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSV 258 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp 258 (572)
.+.+|++|+ +..|+.|..+ ++++.||... +|. +++|+ .||+|+|+.-..
T Consensus 128 ~~~~GV~I~-~~~V~~L~~d--~g~V~GV~t~--~G~--~i~Ad-~VVLATG~~s~~ 176 (641)
T 3cp8_A 128 EHEPNIDLL-QDTVIGVSAN--SGKFSSVTVR--SGR--AIQAK-AAILACGTFLNG 176 (641)
T ss_dssp HTCTTEEEE-ECCEEEEEEE--TTEEEEEEET--TSC--EEEEE-EEEECCTTCBTC
T ss_pred HhCCCCEEE-eeEEEEEEec--CCEEEEEEEC--CCc--EEEeC-EEEECcCCCCCc
Confidence 344799996 5599999887 5788888764 564 68896 899999987443
No 83
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=70.68 E-value=5.6 Score=40.80 Aligned_cols=51 Identities=12% Similarity=0.088 Sum_probs=39.8
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchh
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~T 257 (572)
...+++|++++.|++|..++ +. ..|.+.+. +|+..++.++ .||+|.|..-.
T Consensus 327 ~~~~v~i~~~~~v~~v~~~~--~~-~~v~~~~~~~g~~~~~~~D-~Vv~AtG~~p~ 378 (463)
T 3s5w_A 327 GIPRHAFRCMTTVERATATA--QG-IELALRDAGSGELSVETYD-AVILATGYERQ 378 (463)
T ss_dssp CCCCSEEETTEEEEEEEEET--TE-EEEEEEETTTCCEEEEEES-EEEECCCEECC
T ss_pred CCCCeEEEeCCEEEEEEecC--CE-EEEEEEEcCCCCeEEEECC-EEEEeeCCCCC
Confidence 34799999999999998763 33 45666544 6888889997 89999998766
No 84
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=70.12 E-value=5.9 Score=40.83 Aligned_cols=66 Identities=12% Similarity=0.121 Sum_probs=44.4
Q ss_pred hHhhhc-CCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH--HHHcCC
Q psy10663 197 FLRAIK-DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 266 (572)
Q Consensus 197 yl~~~~-~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L--Ll~SgI 266 (572)
++.... ++.+++|++++.|++|.-++ +. +.|.+.+.+|+..++.++ .||+|+|..-+..+ |..+|+
T Consensus 220 ~l~~~l~~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~gl 288 (468)
T 2qae_A 220 ALVGALAKNEKMKFMTSTKVVGGTNNG--DS-VSLEVEGKNGKRETVTCE-ALLVSVGRRPFTGGLGLDKINV 288 (468)
T ss_dssp HHHHHHHHHTCCEEECSCEEEEEEECS--SS-EEEEEECC---EEEEEES-EEEECSCEEECCTTSCHHHHTC
T ss_pred HHHHHHhhcCCcEEEeCCEEEEEEEcC--Ce-EEEEEEcCCCceEEEECC-EEEECCCcccCCCCCCchhcCC
Confidence 444445 56799999999999998653 22 345554335655678997 89999998877666 445554
No 85
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=69.96 E-value=2.4 Score=43.05 Aligned_cols=62 Identities=18% Similarity=0.283 Sum_probs=46.8
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
++....++.+++|++++.|++|.-+ +++.+|++. +|+ ++.++ .||+|.|..-+..||..+|+
T Consensus 190 ~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~~--dg~--~i~aD-~Vv~a~G~~p~~~l~~~~gl 251 (410)
T 3ef6_A 190 WLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMAS--DGR--SFVAD-SALICVGAEPADQLARQAGL 251 (410)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEET--TSC--EEECS-EEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEEC--CCC--EEEcC-EEEEeeCCeecHHHHHhCCC
Confidence 3444445679999999999998754 355677765 565 57787 89999999888788877775
No 86
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=69.88 E-value=3.8 Score=41.87 Aligned_cols=64 Identities=17% Similarity=0.310 Sum_probs=46.2
Q ss_pred HhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 198 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 198 l~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
+....++.+++|++++.|++|.-+.+++++.+|++. +|+ ++.++ .||+|.|..-...||..+|+
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~--~G~--~i~~D-~Vv~a~G~~p~~~l~~~~gl 260 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCE--DGT--RLPAD-LVIAGIGLIPNCELASAAGL 260 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEET--TSC--EEECS-EEEECCCEEECCHHHHHTTC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeC--CCC--EEEcC-EEEECCCCCcCcchhhccCC
Confidence 333345579999999999999862113567777764 564 57786 89999998766677777765
No 87
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=69.58 E-value=3.7 Score=42.30 Aligned_cols=48 Identities=10% Similarity=0.097 Sum_probs=36.8
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcc
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 255 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai 255 (572)
.+..+.+|++++.|++|..+.+++++++|.. +|+ +++|+ .||+|+|..
T Consensus 252 ~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~---~g~--~~~ad-~VV~a~~~~ 299 (453)
T 2bcg_G 252 SAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT---KLG--TFKAP-LVIADPTYF 299 (453)
T ss_dssp HHHTTCEEECSCCCCEEEEETTTTEEEEEEE---TTE--EEECS-CEEECGGGC
T ss_pred HHHcCCEEECCCEEEEEEEECCCCeEEEEEE---CCe--EEECC-EEEECCCcc
Confidence 3456899999999999998732367888865 353 57886 899999986
No 88
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=68.97 E-value=5.4 Score=39.97 Aligned_cols=54 Identities=19% Similarity=0.180 Sum_probs=37.1
Q ss_pred hHhhhcCC-CCeEEeccceEEEEEEeCCCCEEE-EEEEEcCCCceeEeeccceeEeccCcchh
Q psy10663 197 FLRAIKDK-NTVQVSKNSEVTKLCFDETKTKVT-GVEFRNPQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 197 yl~~~~~~-~nl~i~~~~~V~~i~~~~~~~~a~-gV~~~~~~g~~~~v~A~k~VILaAGai~T 257 (572)
+|...... ++++|+.+++|++|..++ +.++ .|.+ .+|+ +++|+ .||+|.|+--.
T Consensus 112 ~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~--~~g~--~~~ad-~vV~AdG~~s~ 167 (399)
T 2x3n_A 112 LVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRL--NDGR--VLRPR-VVVGADGIASY 167 (399)
T ss_dssp HHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEE--TTSC--EEEEE-EEEECCCTTCH
T ss_pred HHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEE--CCCC--EEECC-EEEECCCCChH
Confidence 34333344 499999999999998874 3343 4444 3565 67886 89999997543
No 89
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=68.84 E-value=6 Score=41.21 Aligned_cols=62 Identities=19% Similarity=0.324 Sum_probs=45.6
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
++....+..+++|++++.|++|..+ ++++ .|++. +|+ ++.++ .||+|+|..-++.||..+|+
T Consensus 231 ~~~~~l~~~GV~v~~~~~V~~i~~~--~~~~-~v~l~--dG~--~i~aD-~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 231 WTMEKVRREGVKVMPNAIVQSVGVS--SGKL-LIKLK--DGR--KVETD-HIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp HHHHHHHTTTCEEECSCCEEEEEEE--TTEE-EEEET--TSC--EEEES-EEEECCCEEECCTTHHHHTC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEec--CCeE-EEEEC--CCC--EEECC-EEEECCCCCccHHHHHHcCC
Confidence 3334445679999999999999865 3443 45543 564 67887 89999999877778877775
No 90
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=68.60 E-value=6.3 Score=41.11 Aligned_cols=57 Identities=26% Similarity=0.277 Sum_probs=40.1
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchh
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~T 257 (572)
.+|...+...+++|+.+++|+.|..++ +.++ |.+.+.+| ..+++|+ -||.|.|+--.
T Consensus 110 ~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g-~~~~~a~-~vVgADG~~S~ 166 (500)
T 2qa1_A 110 THLEQWATGLGADIRRGHEVLSLTDDG--AGVT-VEVRGPEG-KHTLRAA-YLVGCDGGRSS 166 (500)
T ss_dssp HHHHHHHHHTTCEEEETCEEEEEEEET--TEEE-EEEEETTE-EEEEEES-EEEECCCTTCH
T ss_pred HHHHHHHHHCCCEEECCcEEEEEEEcC--CeEE-EEEEcCCC-CEEEEeC-EEEECCCcchH
Confidence 444443344589999999999999874 4443 66665445 5689996 88888887543
No 91
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=68.05 E-value=6.2 Score=42.47 Aligned_cols=49 Identities=12% Similarity=0.087 Sum_probs=36.3
Q ss_pred hhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccC
Q psy10663 200 AIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAAN 253 (572)
Q Consensus 200 ~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAG 253 (572)
.+.+..|.+|++++.|++|+++++.++++||.. .+|+ +++|+ .||..+.
T Consensus 386 r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~--~~Ge--~i~A~-~VVs~~~ 434 (650)
T 1vg0_A 386 RMCAVFGGIYCLRHSVQCLVVDKESRKCKAVID--QFGQ--RIISK-HFIIEDS 434 (650)
T ss_dssp HHHHHTTCEEESSCCEEEEEEETTTCCEEEEEE--TTSC--EEECS-EEEEEGG
T ss_pred HHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEe--CCCC--EEEcC-EEEEChh
Confidence 334567899999999999999843278999873 4676 46785 6776444
No 92
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=67.70 E-value=6.8 Score=40.87 Aligned_cols=56 Identities=18% Similarity=0.179 Sum_probs=39.4
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcch
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN 256 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~ 256 (572)
.+|...+...+++|+.+++|+.|..++ +.++ |.+.+.+| +.+++|+ -||.|.|+--
T Consensus 111 ~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g-~~~~~a~-~vVgADG~~S 166 (499)
T 2qa2_A 111 SVLEEWALGRGAELLRGHTVRALTDEG--DHVV-VEVEGPDG-PRSLTTR-YVVGCDGGRS 166 (499)
T ss_dssp HHHHHHHHHTTCEEEESCEEEEEEECS--SCEE-EEEECSSC-EEEEEEE-EEEECCCTTC
T ss_pred HHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEE-EEEEcCCC-cEEEEeC-EEEEccCccc
Confidence 344443344589999999999998874 3343 66665555 5789996 8888888743
No 93
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=66.85 E-value=3.9 Score=42.27 Aligned_cols=64 Identities=14% Similarity=0.201 Sum_probs=44.5
Q ss_pred HhHhhhcCCCCeE--EeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHH
Q psy10663 196 IFLRAIKDKNTVQ--VSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 196 ~yl~~~~~~~nl~--i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.||....++.+++ |+.++.|++|..+++++. ..|.+.+. +|+..++.++ .||+|.|....|+++
T Consensus 105 ~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~-~~V~~~~~~~g~~~~~~~d-~VVvAtG~~s~p~~p 171 (464)
T 2xve_A 105 DYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQT-FTVTVQDHTTDTIYSEEFD-YVVCCTGHFSTPYVP 171 (464)
T ss_dssp HHHHHHHHHHTCGGGEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEES-EEEECCCSSSSBCCC
T ss_pred HHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCc-EEEEEEEcCCCceEEEEcC-EEEECCCCCCCCccC
Confidence 4555434444676 889999999998753222 34555532 4666778896 899999988888765
No 94
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=66.78 E-value=4.5 Score=40.91 Aligned_cols=56 Identities=14% Similarity=0.182 Sum_probs=38.6
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCC--CCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDET--KTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~--~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
+|....++.+++|++++.|++|..+++ ++. ..|+. .+| +++|+ .||+|+|+...|+
T Consensus 114 ~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~--~~g---~i~ad-~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 114 MLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQV--NST---QWQCK-NLIVATGGLSMPG 171 (401)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEE--TTE---EEEES-EEEECCCCSSCGG
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEE--CCC---EEECC-EEEECCCCccCCC
Confidence 444434557899999999999987621 122 23432 233 68896 8999999998776
No 95
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=65.76 E-value=5.7 Score=41.50 Aligned_cols=59 Identities=19% Similarity=0.195 Sum_probs=43.5
Q ss_pred HHhHhhhcCCCCeEEeccceEEEEEEeCCCC-----EEEEEEEEcC-CCceeEeeccceeEeccCc
Q psy10663 195 SIFLRAIKDKNTVQVSKNSEVTKLCFDETKT-----KVTGVEFRNP-QGKTIKVNANREVVLAANS 254 (572)
Q Consensus 195 ~~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~-----~a~gV~~~~~-~g~~~~v~A~k~VILaAGa 254 (572)
..||..++++-+..|..+++|++|..++.++ ...-|+..+. .|+..++.|+ .||+|.|.
T Consensus 148 ~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar-~vVlatG~ 212 (501)
T 4b63_A 148 EDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTR-KVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEE-EEEECCCC
T ss_pred HHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeC-EEEECcCC
Confidence 4688776666667899999999999865322 2345666543 5778889996 89999994
No 96
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=64.97 E-value=7.5 Score=40.85 Aligned_cols=58 Identities=16% Similarity=0.164 Sum_probs=39.1
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEE--EEEEcCCCceeEeeccceeEeccCcch
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTG--VEFRNPQGKTIKVNANREVVLAANSIN 256 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~g--V~~~~~~g~~~~v~A~k~VILaAGai~ 256 (572)
.+|...+...|++|+.+++|++|..+++ +++.+ |.+.+.++ ..+++|+ .||.|.|+--
T Consensus 124 ~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~~~v~v~~~~~~~-~~~i~a~-~vV~AdG~~S 183 (535)
T 3ihg_A 124 PILLAQARKHGGAIRFGTRLLSFRQHDD-DAGAGVTARLAGPDG-EYDLRAG-YLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHTTCEEESSCEEEEEEEECG-GGCSEEEEEEEETTE-EEEEEEE-EEEECCCTTC
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEECCC-CccccEEEEEEcCCC-eEEEEeC-EEEECCCCcc
Confidence 3444433445899999999999998752 22223 44443344 5789996 8999999753
No 97
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=64.43 E-value=8.5 Score=38.39 Aligned_cols=62 Identities=13% Similarity=0.081 Sum_probs=44.3
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
++....++.+++|++++.|++|..++ +. ..|++ .+|+ ++.++ .||+|+|.--...||..+|+
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~--~~g~--~i~~d-~vv~a~G~~p~~~l~~~~g~ 253 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKAG--EG-LEAHL--SDGE--VIPCD-LVVSAVGLRPRTELAFAAGL 253 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEET--TE-EEEEE--TTSC--EEEES-EEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEecC--CE-EEEEE--CCCC--EEECC-EEEECcCCCcCHHHHHHCCC
Confidence 44444556799999999999998763 32 34444 3564 57886 89999998776667766665
No 98
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=64.35 E-value=8.3 Score=40.06 Aligned_cols=53 Identities=15% Similarity=0.142 Sum_probs=40.1
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
+.. ++|++++.|++|..++ +.++ |.+.+.+|+..++.++ .||+|.|..-+..+
T Consensus 226 ~~~-V~i~~~~~v~~i~~~~--~~v~-v~~~~~~G~~~~i~~D-~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 226 NEE-FYFDAKARVISTIEKE--DAVE-VIYFDKSGQKTTESFQ-YVLAATGRKANVDK 278 (492)
T ss_dssp HTT-SEEETTCEEEEEEECS--SSEE-EEEECTTCCEEEEEES-EEEECSCCEESCSS
T ss_pred hhC-cEEEECCEEEEEEEcC--CEEE-EEEEeCCCceEEEECC-EEEEeeCCccCCCC
Confidence 344 9999999999998763 3333 5555457877789997 89999998766666
No 99
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=63.82 E-value=6.6 Score=40.93 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=38.2
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
.+|...+...+++|+.+ +|++|..++ ++++++|+.. +|+ +++|+ .||.|.|+
T Consensus 177 ~~L~~~a~~~gv~~~~~-~v~~i~~~~-~~~~~~v~~~--~g~--~~~ad-~vV~A~G~ 228 (511)
T 2weu_A 177 RYLSEYAIARGVRHVVD-DVQHVGQDE-RGWISGVHTK--QHG--EISGD-LFVDCTGF 228 (511)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEES--SSC--EEECS-EEEECCGG
T ss_pred HHHHHHHHHCCCEEEEC-eEeEEEEcC-CCCEEEEEEC--CCC--EEEcC-EEEECCCc
Confidence 34444344578999999 999998865 3567777764 564 68896 89999996
No 100
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=63.69 E-value=8.5 Score=39.90 Aligned_cols=65 Identities=22% Similarity=0.289 Sum_probs=45.9
Q ss_pred HhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCC-CceeEeeccceeEeccCcchhhHH--HHHcCC
Q psy10663 198 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQ-GKTIKVNANREVVLAANSINSVRI--LQQSGV 266 (572)
Q Consensus 198 l~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~-g~~~~v~A~k~VILaAGai~Tp~L--Ll~SgI 266 (572)
+....++.+++|++++.|++|.-++ +. ..|.+.+.+ |+..++.++ .||+|.|-.-+..+ |..+|+
T Consensus 245 l~~~l~~~gV~v~~~~~v~~i~~~~--~~-~~v~~~~~~~g~~~~i~~D-~Vi~a~G~~p~~~~l~l~~~g~ 312 (491)
T 3urh_A 245 LQRMLTKQGIDFKLGAKVTGAVKSG--DG-AKVTFEPVKGGEATTLDAE-VVLIATGRKPSTDGLGLAKAGV 312 (491)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET--TE-EEEEEEETTSCCCEEEEES-EEEECCCCEECCTTSCHHHHTC
T ss_pred HHHHHHhCCCEEEECCeEEEEEEeC--CE-EEEEEEecCCCceEEEEcC-EEEEeeCCccCCCccCchhcCc
Confidence 3344456799999999999998763 33 346666433 666788897 89999997766554 555554
No 101
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=63.22 E-value=11 Score=38.84 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=44.8
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEE-cCCCceeEeeccceeEeccCcchhhHH--HHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFR-NPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~-~~~g~~~~v~A~k~VILaAGai~Tp~L--Ll~SgI 266 (572)
++....++.+++|++++.|++|.-++ +. ..|++. +..|+..++.++ .||+|.|..-+..+ |..+|+
T Consensus 215 ~l~~~l~~~gV~i~~~~~v~~i~~~~--~~-~~v~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~g~ 283 (464)
T 2eq6_A 215 LLRRALEKEGIRVRTKTKAVGYEKKK--DG-LHVRLEPAEGGEGEEVVVD-KVLVAVGRKPRTEGLGLEKAGV 283 (464)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEEET--TE-EEEEEEETTCCSCEEEEES-EEEECSCEEESCTTSSHHHHTC
T ss_pred HHHHHHHhcCCEEEcCCEEEEEEEeC--CE-EEEEEeecCCCceeEEEcC-EEEECCCcccCCCCCChhhcCc
Confidence 34444456799999999999998763 33 345554 222776688997 89999998766555 344443
No 102
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=62.57 E-value=8.4 Score=39.18 Aligned_cols=61 Identities=13% Similarity=0.172 Sum_probs=45.5
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcC
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 265 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~Sg 265 (572)
.++....++.|+++++++.|++|.- + ++.+.+.+|...++.++ .||+++|.-. +.++..|+
T Consensus 204 ~~l~~~l~~~GV~~~~~~~v~~v~~----~---~~~~~~~~g~~~~i~~d-~vi~~~G~~~-~~~~~~~~ 264 (430)
T 3hyw_A 204 RLVEDLFAERNIDWIANVAVKAIEP----D---KVIYEDLNGNTHEVPAK-FTMFMPSFQG-PEVVASAG 264 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEECS----S---EEEEECTTSCEEEEECS-EEEEECEEEC-CHHHHTTC
T ss_pred HHHHHHHHhCCeEEEeCceEEEEeC----C---ceEEEeeCCCceEeecc-eEEEeccCCC-chHHHhcc
Confidence 4555555668999999999999842 2 34566668888899997 8999999655 46677776
No 103
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=61.76 E-value=3.5 Score=42.16 Aligned_cols=45 Identities=16% Similarity=0.238 Sum_probs=36.1
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcc
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 255 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai 255 (572)
+..+.+|++++.|++|..+ ++++++|.. +|+ +++|+ .||+|+|..
T Consensus 245 ~~~G~~i~~~~~V~~I~~~--~~~v~~v~~---~g~--~~~ad-~VV~a~~~~ 289 (433)
T 1d5t_A 245 AIYGGTYMLNKPVDDIIME--NGKVVGVKS---EGE--VARCK-QLICDPSYV 289 (433)
T ss_dssp HHHTCCCBCSCCCCEEEEE--TTEEEEEEE---TTE--EEECS-EEEECGGGC
T ss_pred HHcCCEEECCCEEEEEEEe--CCEEEEEEE---CCe--EEECC-EEEECCCCC
Confidence 4458899999999999987 578888763 454 57896 899999976
No 104
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=60.04 E-value=5.1 Score=39.02 Aligned_cols=55 Identities=20% Similarity=0.300 Sum_probs=41.8
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHH
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
+..++++++++.|.+|.-+ +++.+|.+.+. +|+..++.++ .||+|.|..-++.+|
T Consensus 202 ~~~gV~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 257 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGD---TTVTGLRVRDTNTGAETTLPVT-GVFVAIGHEPRSGLV 257 (335)
T ss_dssp HCTTEEEECSEEEEEEECS---SSCCEEEEEEETTSCCEEECCS-CEEECSCEEECCTTT
T ss_pred ccCCcEEEeCceeEEEecC---CcEeEEEEEEcCCCceEEeecC-EEEEccCCccChhHh
Confidence 4679999999999998754 24566777632 5666788997 899999987665554
No 105
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=59.73 E-value=8.2 Score=39.93 Aligned_cols=62 Identities=15% Similarity=0.132 Sum_probs=44.6
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++....++.+++|++++.|++|..+++ +. ..|++.+. +|+..++.++ .||+|.|-.-...+|
T Consensus 232 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~-~~v~~~~~~~~~~~~~~~D-~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 232 LVAASMEERGIPFLRKTVPLSVEKQDD-GK-LLVKYKNVETGEESEDVYD-TVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHHHHHHHTTCCEEETEEEEEEEECTT-SC-EEEEEEETTTCCEEEEEES-EEEECSCEEECCGGG
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcCC-Cc-EEEEEecCCCCceeEEEcC-EEEECcccccCcCcC
Confidence 333444567999999999999987543 33 34666643 3666789997 899999987666665
No 106
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=59.35 E-value=8 Score=39.53 Aligned_cols=62 Identities=11% Similarity=0.056 Sum_probs=42.2
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCc-eeEeeccceeEeccCcchhhHHH
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGK-TIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~-~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.||....+.-+..|+.+++|++|..++ +. ..|.+.+ .+|+ ..++.++ .||+|.|+...|++.
T Consensus 119 ~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~-~~V~~~~~~~G~~~~~~~~d-~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 119 EYQRIYAQPLLPFIKLATDVLDIEKKD--GS-WVVTYKGTKAGSPISKDIFD-AVSICNGHYEVPYIP 182 (447)
T ss_dssp HHHHHHHGGGGGGEECSEEEEEEEEET--TE-EEEEEEESSTTCCEEEEEES-EEEECCCSSSSBCBC
T ss_pred HHHHHHHHHhhCeEEeCCEEEEEEeCC--Ce-EEEEEeecCCCCeeEEEEeC-EEEECCCCCCCCCCC
Confidence 455544333356788999999998763 32 3455553 2365 5678896 899999998888764
No 107
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=59.20 E-value=5.3 Score=42.17 Aligned_cols=60 Identities=18% Similarity=0.240 Sum_probs=42.5
Q ss_pred HhHhhhcCCCCe--EEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 196 IFLRAIKDKNTV--QVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 196 ~yl~~~~~~~nl--~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.|+....++.++ +|..+++|+++.++++++ ...|.. .+|+ ++.++ .||+|.|+...|++.
T Consensus 91 ~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~-~~~V~~--~~G~--~i~ad-~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 91 EYLEDVVDRFDLRRHFKFGTEVTSALYLDDEN-LWEVTT--DHGE--VYRAK-YVVNAVGLLSAINFP 152 (540)
T ss_dssp HHHHHHHHHTTCGGGEEESCCEEEEEEETTTT-EEEEEE--TTSC--EEEEE-EEEECCCSCCSBCCC
T ss_pred HHHHHHHHHcCCcceeEeccEEEEEEEeCCCC-EEEEEE--cCCC--EEEeC-EEEECCcccccCCCC
Confidence 455554455567 899999999999986433 333444 3565 57886 899999998777754
No 108
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=58.61 E-value=5.2 Score=41.43 Aligned_cols=65 Identities=14% Similarity=0.175 Sum_probs=43.7
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH-HHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI-LQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L-Ll~SgI 266 (572)
.+....++.+++|++++.|++|.-+++ +++..|++. +|+ .++.++ .||+|.|..-+..| |..+|+
T Consensus 231 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~~v~~~--~G~-~~i~~D-~vv~a~G~~p~~~l~l~~~gl 296 (479)
T 2hqm_A 231 TITDHYVKEGINVHKLSKIVKVEKNVE-TDKLKIHMN--DSK-SIDDVD-ELIWTIGRKSHLGMGSENVGI 296 (479)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEET--TSC-EEEEES-EEEECSCEEECCCSSGGGGTC
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEEcCC-CcEEEEEEC--CCc-EEEEcC-EEEECCCCCCccccChhhcCc
Confidence 333334567999999999999976532 334455553 564 468897 89999997655555 455554
No 109
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=58.28 E-value=7.1 Score=41.24 Aligned_cols=52 Identities=19% Similarity=0.249 Sum_probs=37.6
Q ss_pred HhHhhhcCCC-CeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 196 IFLRAIKDKN-TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 196 ~yl~~~~~~~-nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
.+|...+... +++|+.+ +|++|..++ ++.+++|+.. +|+ ++.|+ .||+|.|+
T Consensus 198 ~~L~~~~~~~~Gv~i~~~-~V~~i~~~~-~g~~~~v~~~--~G~--~i~ad-~vI~A~G~ 250 (550)
T 2e4g_A 198 DFLRRFATEKLGVRHVED-RVEHVQRDA-NGNIESVRTA--TGR--VFDAD-LFVDCSGF 250 (550)
T ss_dssp HHHHHHHHHHSCCEEEEC-CEEEEEECT-TSCEEEEEET--TSC--EEECS-EEEECCGG
T ss_pred HHHHHHHHhcCCcEEEEC-eEeEEEEcC-CCCEEEEEEC--CCC--EEECC-EEEECCCC
Confidence 3444433344 9999999 999998865 3567777764 463 68896 89999996
No 110
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=58.20 E-value=7.7 Score=40.04 Aligned_cols=59 Identities=17% Similarity=0.213 Sum_probs=41.6
Q ss_pred HhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 198 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 198 l~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
+....++.+++|++++.|++|..++ +.+ .|.+.+.+| ..++.++ .||+|.|..-....|
T Consensus 227 l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~-~v~~~~~~g-~~~~~~D-~vi~a~G~~p~~~~l 285 (476)
T 3lad_A 227 AQKILTKQGLKILLGARVTGTEVKN--KQV-TVKFVDAEG-EKSQAFD-KLIVAVGRRPVTTDL 285 (476)
T ss_dssp HHHHHHHTTEEEEETCEEEEEEECS--SCE-EEEEESSSE-EEEEEES-EEEECSCEEECCTTC
T ss_pred HHHHHHhCCCEEEECCEEEEEEEcC--CEE-EEEEEeCCC-cEEEECC-EEEEeeCCcccCCCC
Confidence 3333456799999999999998763 333 366664445 5678897 899999976555543
No 111
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=58.05 E-value=11 Score=40.75 Aligned_cols=53 Identities=19% Similarity=0.157 Sum_probs=38.7
Q ss_pred CeEEeccceEEEEEEeCC-CCEEEEEEEEc----CCCceeEeeccceeEeccCcchhhH
Q psy10663 206 TVQVSKNSEVTKLCFDET-KTKVTGVEFRN----PQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~-~~~a~gV~~~~----~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
+++|+.+++|+.|..+++ ++..+.|.+.+ .+|...+++|+ -||.|.|+--+.|
T Consensus 157 ~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~-~vVgADG~~S~vR 214 (639)
T 2dkh_A 157 RLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQAR-YVVGCDGARSNVR 214 (639)
T ss_dssp CCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEE-EEEECCCTTCHHH
T ss_pred CcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeC-EEEECCCcchHHH
Confidence 569999999999998753 12334566664 36777889996 8999999855443
No 112
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=57.60 E-value=7.5 Score=38.79 Aligned_cols=50 Identities=8% Similarity=0.042 Sum_probs=36.4
Q ss_pred CCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchh
Q psy10663 204 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 204 ~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~T 257 (572)
..+++|+.+++|++|..+++ + .+.|.+. .+|+..+++|+ .||.|.|.--.
T Consensus 115 ~~g~~i~~~~~v~~i~~~~~-~-~~~v~~~-~~g~~~~~~a~-~vV~AdG~~S~ 164 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDLQG-E-RPYVTFE-RDGERLRLDCD-YIAGCDGFHGI 164 (394)
T ss_dssp HTTCEEESSCEEEEEECTTS-S-SCEEEEE-ETTEEEEEECS-EEEECCCTTCS
T ss_pred hcCCeEEeceeEEEEEEecC-C-ceEEEEe-cCCcEEEEEeC-EEEECCCCCcH
Confidence 45899999999999987532 2 2346663 37777789996 89999987443
No 113
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=57.05 E-value=5.9 Score=41.17 Aligned_cols=54 Identities=15% Similarity=0.141 Sum_probs=38.7
Q ss_pred eEEeccceEEEEEEeCCCC---EEEEEEEEcCCCce-eEeeccceeEeccCcchhhHHH
Q psy10663 207 VQVSKNSEVTKLCFDETKT---KVTGVEFRNPQGKT-IKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 207 l~i~~~~~V~~i~~~~~~~---~a~gV~~~~~~g~~-~~v~A~k~VILaAGai~Tp~LL 261 (572)
.+|++++.|++|..++++. ..+.|.+.+.+|.. .+++|+ .||+++..-...+||
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad-~VI~a~p~~~l~~ll 313 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFD-AVIMTAPLCDVKSMK 313 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEES-EEEECSCHHHHHTSE
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECC-EEEECCCHHHHHHHh
Confidence 6899999999999875321 13667776445643 467896 899999876666655
No 114
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=56.46 E-value=9.8 Score=39.99 Aligned_cols=53 Identities=13% Similarity=0.224 Sum_probs=38.0
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcc
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 255 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai 255 (572)
.+|...+...+++++.+ +|++|..++ ++.+++|... +|+ +++|+ .||+|.|+-
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~-~g~~~~v~~~--~g~--~i~ad-~vV~A~G~~ 221 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNN-RGYISNLLTK--EGR--TLEAD-LFIDCSGMR 221 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEET--TSC--EECCS-EEEECCGGG
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcC-CCcEEEEEEC--CCc--EEEeC-EEEECCCCc
Confidence 44444344578999999 899998865 3566677664 564 68896 899999963
No 115
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=54.74 E-value=13 Score=38.59 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=43.7
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++....++.+++|++++.|.+|.-.++ +. ..|++.+. +|+..++.++ .||+|.|-.-+..+|
T Consensus 230 ~l~~~l~~~gv~~~~~~~v~~i~~~~~-~~-~~v~~~~~~~g~~~~~~~D-~vi~a~G~~p~~~~l 292 (488)
T 3dgz_A 230 LVTEHMESHGTQFLKGCVPSHIKKLPT-NQ-LQVTWEDHASGKEDTGTFD-TVLWAIGRVPETRTL 292 (488)
T ss_dssp HHHHHHHHTTCEEEETEEEEEEEECTT-SC-EEEEEEETTTTEEEEEEES-EEEECSCEEESCGGG
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEcCC-Cc-EEEEEEeCCCCeeEEEECC-EEEEcccCCcccCcC
Confidence 333444568999999999999976532 32 34666643 3666778897 899999987666653
No 116
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=54.44 E-value=6.8 Score=41.44 Aligned_cols=61 Identities=21% Similarity=0.305 Sum_probs=43.2
Q ss_pred HhHhhhcCCCCe--EEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHH
Q psy10663 196 IFLRAIKDKNTV--QVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 262 (572)
Q Consensus 196 ~yl~~~~~~~nl--~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl 262 (572)
.|+....++.++ +|..+++|+++.++++++ ...|.. .+|+ ++.++ .||+|.|....|++.-
T Consensus 103 ~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~-~w~V~~--~~G~--~i~ad-~lV~AtG~~s~p~~p~ 165 (549)
T 4ap3_A 103 AYLEHVADRFDLRRDIRFDTRVTSAVLDEEGL-RWTVRT--DRGD--EVSAR-FLVVAAGPLSNANTPA 165 (549)
T ss_dssp HHHHHHHHHTTCGGGEECSCCEEEEEEETTTT-EEEEEE--TTCC--EEEEE-EEEECCCSEEECCCCC
T ss_pred HHHHHHHHHcCCCccEEECCEEEEEEEcCCCC-EEEEEE--CCCC--EEEeC-EEEECcCCCCCCCCCC
Confidence 566655555666 899999999999986433 233443 3565 57886 8999999887777643
No 117
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=54.41 E-value=6 Score=40.71 Aligned_cols=63 Identities=17% Similarity=0.225 Sum_probs=42.6
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH--HHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L--Ll~SgI 266 (572)
.+....++.+++|++++.|++|..+++ + ...|++ ..+|+ +.++ .||+|+|..-+..+ |...||
T Consensus 216 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~-~~~v~~-~~~g~---i~aD-~Vv~a~G~~p~~~~l~l~~~g~ 280 (463)
T 4dna_A 216 GLHAAMEEKGIRILCEDIIQSVSADAD-G-RRVATT-MKHGE---IVAD-QVMLALGRMPNTNGLGLEAAGV 280 (463)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECTT-S-CEEEEE-SSSCE---EEES-EEEECSCEEESCTTSSTGGGTC
T ss_pred HHHHHHHHCCCEEECCCEEEEEEEcCC-C-EEEEEE-cCCCe---EEeC-EEEEeeCcccCCCCCCccccCc
Confidence 343445668999999999999987642 2 334542 24564 7887 89999998766655 344443
No 118
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=54.15 E-value=5.3 Score=41.11 Aligned_cols=52 Identities=17% Similarity=0.177 Sum_probs=36.7
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
....+++|++++.|++|..++ +.+..|.. ++. ++.|+ .||+|+++-...+||
T Consensus 244 l~~~g~~i~~~~~V~~i~~~~--~~~~~v~~---~~~--~~~ad-~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 244 LTSRGVSVLRGQPVCGLSLQA--EGRWKVSL---RDS--SLEAD-HVISAIPASVLSELL 295 (477)
T ss_dssp HHHTTCEEECSCCCCEEEECG--GGCEEEEC---SSC--EEEES-EEEECSCHHHHHHHS
T ss_pred HHhcCCEEEeCCEEEEEEEcC--CceEEEEE---CCe--EEEcC-EEEECCCHHHHHHhc
Confidence 344589999999999998874 22334432 343 57886 899999886666654
No 119
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=53.63 E-value=8.7 Score=39.90 Aligned_cols=63 Identities=21% Similarity=0.316 Sum_probs=42.0
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH-H-HHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR-I-LQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~-L-Ll~SgI 266 (572)
++....++.+++|++++.|++|..+++ + ...|++. +|+ ++.++ .||+|+|..-... | |..+|+
T Consensus 236 ~l~~~l~~~GV~i~~~~~v~~i~~~~~-~-~~~v~~~--~G~--~i~~D-~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 236 QLTEQLRANGINVRTHENPAKVTKNAD-G-TRHVVFE--SGA--EADYD-VVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp HHHHHHHHTTEEEEETCCEEEEEECTT-S-CEEEEET--TSC--EEEES-EEEECSCEEESCTTSCGGGGTC
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcCC-C-EEEEEEC--CCc--EEEcC-EEEEccCCCcCccccCchhcCc
Confidence 343444567999999999999987632 2 2345543 565 67887 8999999765554 3 344443
No 120
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=53.52 E-value=13 Score=39.01 Aligned_cols=52 Identities=8% Similarity=0.118 Sum_probs=37.1
Q ss_pred HhHhhhcCC-CCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 196 IFLRAIKDK-NTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 196 ~yl~~~~~~-~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
.+|...+.. .+++++.+ +|++|..+++ +.+++|+.. +|. +++|+ .||.|.|+
T Consensus 179 ~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~--~g~--~i~ad-~vV~AdG~ 231 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLITK--QNG--EISGQ-LFIDCTGA 231 (526)
T ss_dssp HHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEES--SSC--EEECS-EEEECSGG
T ss_pred HHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEEC--CCC--EEEcC-EEEECCCc
Confidence 444443444 79999999 6999988653 556677664 555 38896 89999996
No 121
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=53.42 E-value=14 Score=38.10 Aligned_cols=67 Identities=15% Similarity=0.188 Sum_probs=44.2
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHH--HHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRI--LQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~L--Ll~SgI 266 (572)
++....++.+++|++++.|++|..++ +..+.|++.+. .+...++.++ .||+|.|..-+..+ |..+|+
T Consensus 225 ~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~~~~~~i~~D-~vv~a~G~~p~~~~l~l~~~g~ 294 (474)
T 1zmd_A 225 NFQRILQKQGFKFKLNTKVTGATKKS--DGKIDVSIEAASGGKAEVITCD-VLLVCIGRRPFTKNLGLEELGI 294 (474)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEECT--TSCEEEEEEETTSCCCEEEEES-EEEECSCEEECCTTSSHHHHTC
T ss_pred HHHHHHHHCCCEEEeCceEEEEEEcC--CceEEEEEEecCCCCceEEEcC-EEEECcCCCcCCCcCCchhcCC
Confidence 34444456799999999999998763 22234544321 3344578887 89999998766665 445554
No 122
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=53.25 E-value=9.5 Score=39.68 Aligned_cols=56 Identities=18% Similarity=0.297 Sum_probs=39.4
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
++....++.+++|++++.|++|.-++ +....|++. +|+ ++.++ .||+|+|..-+..
T Consensus 240 ~l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~~v~~~--~G~--~i~~D-~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 240 EVTKQLTANGIEIMTNENPAKVSLNT--DGSKHVTFE--SGK--TLDVD-VVMMAIGRIPRTN 295 (495)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECT--TSCEEEEET--TSC--EEEES-EEEECSCEEECCG
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcC--CceEEEEEC--CCc--EEEcC-EEEECCCCccccc
Confidence 34344456799999999999998653 223455543 565 67887 8999999865555
No 123
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=52.63 E-value=8.2 Score=37.94 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=36.3
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhh
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSV 258 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp 258 (572)
.|+....++.+++|+.++.|++|..+++ + +.+...+| ++.++ .||||+|+...|
T Consensus 92 ~~l~~~~~~~gv~i~~~~~v~~i~~~~~-~----~~v~~~~g---~~~~d-~vVlAtG~~~~p 145 (369)
T 3d1c_A 92 EYLQVVANHYELNIFENTVVTNISADDA-Y----YTIATTTE---TYHAD-YIFVATGDYNFP 145 (369)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEECSS-S----EEEEESSC---CEEEE-EEEECCCSTTSB
T ss_pred HHHHHHHHHcCCeEEeCCEEEEEEECCC-e----EEEEeCCC---EEEeC-EEEECCCCCCcc
Confidence 4554444556899999999999987642 2 22222344 47786 899999986544
No 124
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=52.07 E-value=11 Score=38.58 Aligned_cols=57 Identities=14% Similarity=0.188 Sum_probs=41.4
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++....++.+++|++++.|++|.-+ ++++++|.. +|+ ++.++ .||+|.|..-+..+|
T Consensus 196 ~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~---~g~--~i~~D-~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 196 ILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL---DGK--EIKSD-IAILCIGFRPNTELL 252 (452)
T ss_dssp HHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET---TSC--EEEES-EEEECCCEEECCGGG
T ss_pred HHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe---CCC--EEECC-EEEECcCCCCCHHHH
Confidence 3444455679999999999999864 356655543 553 57887 899999987776654
No 125
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=52.03 E-value=14 Score=37.83 Aligned_cols=65 Identities=18% Similarity=0.196 Sum_probs=44.6
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH--HHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L--Ll~SgI 266 (572)
++....++.+++|++++.|++|.-++ +. +.|.+. .+|+..++.++ .||+|.|..-+..+ |..+|+
T Consensus 217 ~l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~-~~g~~~~~~~D-~vv~a~G~~p~~~~l~~~~~gl 283 (464)
T 2a8x_A 217 EIEKQFKKLGVTILTATKVESIADGG--SQ-VTVTVT-KDGVAQELKAE-KVLQAIGFAPNVEGYGLDKAGV 283 (464)
T ss_dssp HHHHHHHHHTCEEECSCEEEEEEECS--SC-EEEEEE-SSSCEEEEEES-EEEECSCEEECCSSSCHHHHTC
T ss_pred HHHHHHHHcCCEEEeCcEEEEEEEcC--Ce-EEEEEE-cCCceEEEEcC-EEEECCCCCccCCCCCchhcCC
Confidence 34333456799999999999997653 32 335544 35666678897 89999998766666 444553
No 126
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=51.97 E-value=6.9 Score=38.25 Aligned_cols=48 Identities=17% Similarity=0.176 Sum_probs=34.8
Q ss_pred CeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 206 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
+++|++++.|++|..++ +.++ |.+ .+|+. +.++ .||+|..+-.+.+||
T Consensus 123 g~~i~~~~~V~~i~~~~--~~~~-v~~--~~g~~--~~ad-~vV~A~p~~~~~~ll 170 (342)
T 3qj4_A 123 GAEVYFRHRVTQINLRD--DKWE-VSK--QTGSP--EQFD-LIVLTMPVPEILQLQ 170 (342)
T ss_dssp TCEEESSCCEEEEEECS--SSEE-EEE--SSSCC--EEES-EEEECSCHHHHTTCB
T ss_pred CCEEEeCCEEEEEEEcC--CEEE-EEE--CCCCE--EEcC-EEEECCCHHHHHHHh
Confidence 78999999999999874 3322 333 35653 5786 899999877666665
No 127
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=51.95 E-value=8.9 Score=39.43 Aligned_cols=61 Identities=11% Similarity=0.117 Sum_probs=42.5
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++....++.+++|++++.|++|.-++ +. +.|.+.+. +|+..++.++ .||+|.|..-+..+|
T Consensus 223 ~l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~l 284 (470)
T 1dxl_A 223 QFQRSLEKQGMKFKLKTKVVGVDTSG--DG-VKLTVEPSAGGEQTIIEAD-VVLVSAGRTPFTSGL 284 (470)
T ss_dssp HHHHHHHHSSCCEECSEEEEEEECSS--SS-EEEEEEESSSCCCEEEEES-EEECCCCEEECCTTS
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEEcC--Ce-EEEEEEecCCCcceEEECC-EEEECCCCCcCCCCC
Confidence 34444456799999999999997653 22 34555422 4655678897 899999987666663
No 128
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=51.71 E-value=12 Score=37.68 Aligned_cols=49 Identities=18% Similarity=0.264 Sum_probs=33.4
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
.+....++.+ +|++++.|++|..++ +.++ |.+ .+|+ +++|+ .||+|+|.
T Consensus 209 l~~~~~~~~g-~i~~~~~V~~i~~~~--~~v~-v~~--~~g~--~~~ad-~vi~a~~~ 257 (431)
T 3k7m_X 209 LVDAMSQEIP-EIRLQTVVTGIDQSG--DVVN-VTV--KDGH--AFQAH-SVIVATPM 257 (431)
T ss_dssp HHHHHHTTCS-CEESSCCEEEEECSS--SSEE-EEE--TTSC--CEEEE-EEEECSCG
T ss_pred HHHHHHhhCC-ceEeCCEEEEEEEcC--CeEE-EEE--CCCC--EEEeC-EEEEecCc
Confidence 3444445556 999999999998764 3332 443 3564 57886 89999974
No 129
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=51.61 E-value=18 Score=37.22 Aligned_cols=68 Identities=13% Similarity=0.104 Sum_probs=44.8
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCC-Cce--eEeeccceeEeccCcchhhH-H-HHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQ-GKT--IKVNANREVVLAANSINSVR-I-LQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~-g~~--~~v~A~k~VILaAGai~Tp~-L-Ll~SgI 266 (572)
++....++.+++|++++.|++|.-+++ +....|.+.+.. |+. .++.++ .||+|.|-.-+.. | |...|+
T Consensus 233 ~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~~~~g~~~g~~~~~D-~vi~a~G~~p~~~~l~l~~~g~ 305 (478)
T 3dk9_A 233 NCTEELENAGVEVLKFSQVKEVKKTLS-GLEVSMVTAVPGRLPVMTMIPDVD-CLLWAIGRVPNTKDLSLNKLGI 305 (478)
T ss_dssp HHHHHHHHTTCEEETTEEEEEEEECSS-SEEEEEEECCTTSCCEEEEEEEES-EEEECSCEEESCTTSCGGGGTC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEcCC-CcEEEEEEccCCCCcccceEEEcC-EEEEeeccccCCCCCCchhcCC
Confidence 344444567999999999999987643 433456665322 443 678897 8999999765554 3 444443
No 130
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=51.14 E-value=20 Score=36.93 Aligned_cols=48 Identities=13% Similarity=0.046 Sum_probs=33.1
Q ss_pred CCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH
Q psy10663 204 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 204 ~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
..+++|++++.|++|..++ +.+ .|.+ .+|+ +++|+ .||+|+|.-...+
T Consensus 268 ~g~~~i~~~~~V~~i~~~~--~~v-~v~~--~~g~--~~~ad-~vI~a~~~~~l~~ 315 (495)
T 2vvm_A 268 TGRLGYVFGCPVRSVVNER--DAA-RVTA--RDGR--EFVAK-RVVCTIPLNVLST 315 (495)
T ss_dssp TTCEEEESSCCEEEEEECS--SSE-EEEE--TTCC--EEEEE-EEEECCCGGGGGG
T ss_pred cCceEEEeCCEEEEEEEcC--CEE-EEEE--CCCC--EEEcC-EEEECCCHHHHhh
Confidence 3349999999999998764 322 2333 3564 57886 8999999644443
No 131
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=50.97 E-value=7.2 Score=41.46 Aligned_cols=56 Identities=23% Similarity=0.259 Sum_probs=38.2
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcch
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN 256 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~ 256 (572)
..|...+...+++|+.+++|+.|..++ +.++ |.+.+.+|+ .+++|+ .||.|.|+--
T Consensus 152 ~~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v~-v~~~~~~G~-~~~~a~-~vV~ADG~~S 207 (570)
T 3fmw_A 152 ALLAEHAREAGAEIPRGHEVTRLRQDA--EAVE-VTVAGPSGP-YPVRAR-YGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHTEECCBSCEEEECCBCS--SCEE-EEEEETTEE-EEEEES-EEEECSCSSC
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcC--CeEE-EEEEeCCCc-EEEEeC-EEEEcCCCCc
Confidence 344443344589999999999998774 3332 555434553 678996 8888888743
No 132
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=50.76 E-value=17 Score=37.56 Aligned_cols=61 Identities=11% Similarity=0.098 Sum_probs=41.2
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++....++.+++|++++.|++|.-++ + ...|++.+.++...++.++ .||+|.|..-+..+|
T Consensus 231 ~l~~~l~~~gV~i~~~~~v~~i~~~~--~-~~~v~~~~~~~~g~~~~~D-~vv~a~G~~p~~~~l 291 (482)
T 1ojt_A 231 VWQKQNEYRFDNIMVNTKTVAVEPKE--D-GVYVTFEGANAPKEPQRYD-AVLVAAGRAPNGKLI 291 (482)
T ss_dssp HHHHHHGGGEEEEECSCEEEEEEEET--T-EEEEEEESSSCCSSCEEES-CEEECCCEEECGGGT
T ss_pred HHHHHHHhcCCEEEECCEEEEEEEcC--C-eEEEEEeccCCCceEEEcC-EEEECcCCCcCCCCC
Confidence 34444556799999999999998763 3 2456665312211246686 899999988776664
No 133
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=50.72 E-value=12 Score=38.54 Aligned_cols=61 Identities=11% Similarity=0.141 Sum_probs=41.7
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
++....++.+++|++++.|++|..+++++ ...|.+.+ .+|...++.++ .||+|.|..-+..
T Consensus 229 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~ 290 (478)
T 1v59_A 229 ATQKFLKKQGLDFKLSTKVISAKRNDDKN-VVEIVVEDTKTNKQENLEAE-VLLVAVGRRPYIA 290 (478)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEEETTTT-EEEEEEEETTTTEEEEEEES-EEEECSCEEECCT
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEecCCC-eEEEEEEEcCCCCceEEECC-EEEECCCCCcCCC
Confidence 44444456799999999999998631223 34566553 24455678897 8999999776555
No 134
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=50.66 E-value=16 Score=35.22 Aligned_cols=49 Identities=16% Similarity=0.234 Sum_probs=35.7
Q ss_pred CeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 206 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
+++|++++.|++|..+++ . |.+...+|+ ...+++ .||+|.|+-...++|
T Consensus 119 g~~i~~~~~v~~i~~~~~--~---~~v~~~~g~-~~~~a~-~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEE--H---WNLLDAEGQ-NHGPFS-HVIIATPAPQASTLL 167 (336)
T ss_dssp TCCEECSCCEEEEEECSS--C---EEEEETTSC-EEEEES-EEEECSCHHHHGGGG
T ss_pred cCcEEecCEEEEEEEeCC--E---EEEEeCCCc-CccccC-EEEEcCCHHHHHHhh
Confidence 789999999999988743 2 333334564 334575 899999987777765
No 135
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=50.57 E-value=13 Score=37.45 Aligned_cols=58 Identities=19% Similarity=0.294 Sum_probs=43.0
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
++....++.+++|++++.|++|. + + +|++. +|+ ++.++ .||+|.|..-+..+|..+|+
T Consensus 192 ~l~~~l~~~GV~i~~~~~v~~i~-~--~----~v~~~--~g~--~i~~D-~vi~a~G~~p~~~l~~~~gl 249 (408)
T 2gqw_A 192 FVARYHAAQGVDLRFERSVTGSV-D--G----VVLLD--DGT--RIAAD-MVVVGIGVLANDALARAAGL 249 (408)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEE-T--T----EEEET--TSC--EEECS-EEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHHHcCcEEEeCCEEEEEE-C--C----EEEEC--CCC--EEEcC-EEEECcCCCccHHHHHhCCC
Confidence 33344456799999999999998 3 3 45553 564 57887 89999998877778877775
No 136
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=49.23 E-value=15 Score=37.94 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=42.3
Q ss_pred HhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 198 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 198 l~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
+....++.+++|++++.|++|.-+ +++..|.. ++. ++.++ .||+|+|..-++.+|..+|+
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~---~~~--~i~~D-~vi~a~G~~p~~~~l~~~g~ 292 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGN---ERVEAVET---DKG--TYKAD-LVLVSVGVKPNTDFLEGTNI 292 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEES---SBEEEEEE---TTE--EEECS-EEEECSCEEESCGGGTTSCC
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcC---CcEEEEEE---CCC--EEEcC-EEEECcCCCcChHHHHhCCc
Confidence 333345679999999999998754 34555543 232 68886 89999998876667665554
No 137
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=48.24 E-value=18 Score=37.08 Aligned_cols=63 Identities=17% Similarity=0.194 Sum_probs=42.5
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH-H-HHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR-I-LQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~-L-Ll~SgI 266 (572)
++....++.+++|++++.|++|.-++ +. ..|++ .+|+. ++.++ .||+|.|..-... | |..+|+
T Consensus 212 ~l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~--~~G~~-~i~~D-~vv~a~G~~p~~~~l~~~~~g~ 276 (463)
T 2r9z_A 212 TLAENMHAQGIETHLEFAVAALERDA--QG-TTLVA--QDGTR-LEGFD-SVIWAVGRAPNTRDLGLEAAGI 276 (463)
T ss_dssp HHHHHHHHTTCEEESSCCEEEEEEET--TE-EEEEE--TTCCE-EEEES-EEEECSCEEESCTTSCHHHHTC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEeC--Ce-EEEEE--eCCcE-EEEcC-EEEECCCCCcCCCCCCchhcCC
Confidence 33333456799999999999998763 22 34444 36764 68887 8999999765544 3 444554
No 138
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=48.18 E-value=12 Score=39.48 Aligned_cols=60 Identities=18% Similarity=0.344 Sum_probs=40.1
Q ss_pred HhHhhhcCCC--CeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 196 IFLRAIKDKN--TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 196 ~yl~~~~~~~--nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.|+....++- +.+|..+++|+++.++++++. ..|.. .+|+ +++|+ .||+|.|+...|++.
T Consensus 98 ~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~-w~V~~--~~G~--~~~ad-~vV~AtG~~s~p~~p 159 (542)
T 1w4x_A 98 RYINFVADKFDLRSGITFHTTVTAAAFDEATNT-WTVDT--NHGD--RIRAR-YLIMASGQLSVPQLP 159 (542)
T ss_dssp HHHHHHHHHTTGGGGEECSCCEEEEEEETTTTE-EEEEE--TTCC--EEEEE-EEEECCCSCCCCCCC
T ss_pred HHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCe-EEEEE--CCCC--EEEeC-EEEECcCCCCCCCCC
Confidence 4554433332 357889999999999864333 23443 3564 57886 899999998777654
No 139
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=48.09 E-value=14 Score=37.74 Aligned_cols=56 Identities=13% Similarity=0.093 Sum_probs=40.3
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.+....++.+++|++++.|++|..+ ++++ .|+.. +| ++.++ .||+|.|..-+..+|
T Consensus 194 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~--~g---~i~aD-~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 194 EVQKSLEKQAVIFHFEETVLGIEET--ANGI-VLETS--EQ---EISCD-SGIFALNLHPQLAYL 249 (452)
T ss_dssp HHHHHHHTTTEEEEETCCEEEEEEC--SSCE-EEEES--SC---EEEES-EEEECSCCBCCCSSC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEcc--CCeE-EEEEC--CC---EEEeC-EEEECcCCCCChHHH
Confidence 4444456789999999999999865 3444 55542 34 68887 899999987666554
No 140
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=48.02 E-value=3.9 Score=37.73 Aligned_cols=21 Identities=19% Similarity=0.279 Sum_probs=18.0
Q ss_pred CccccccCCCCCeEEEEcccCC
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPD 22 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~ 22 (572)
++|..|+++ |++|+|||+.+.
T Consensus 16 ~aA~~La~~-G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 16 SAAQALTAA-GHQVHLFDKSRG 36 (336)
T ss_dssp HHHHHHHHT-TCCEEEECSSSS
T ss_pred HHHHHHHHC-CCCEEEEECCCC
Confidence 478999976 999999999764
No 141
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=47.15 E-value=8.9 Score=40.49 Aligned_cols=61 Identities=16% Similarity=0.209 Sum_probs=39.9
Q ss_pred HhHhhhcCCCCe--EEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHH
Q psy10663 196 IFLRAIKDKNTV--QVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 262 (572)
Q Consensus 196 ~yl~~~~~~~nl--~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl 262 (572)
.|+....++.++ .|..+++|+++.++++++ ...|+. .+|+ +++++ .||+|.|....|++.-
T Consensus 91 ~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~--~~G~--~~~ad-~lV~AtG~~s~p~~p~ 153 (545)
T 3uox_A 91 RYVNRAADAMDVRKHYRFNTRVTAARYVENDR-LWEVTL--DNEE--VVTCR-FLISATGPLSASRMPD 153 (545)
T ss_dssp HHHHHHHHHHTCGGGEECSCCEEEEEEEGGGT-EEEEEE--TTTE--EEEEE-EEEECCCSCBC---CC
T ss_pred HHHHHHHHHcCCcCcEEECCEEEEEEEeCCCC-EEEEEE--CCCC--EEEeC-EEEECcCCCCCCcCCC
Confidence 455554444455 788999999999986433 233443 3564 67886 8999999988887653
No 142
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.02 E-value=18 Score=36.92 Aligned_cols=59 Identities=17% Similarity=0.197 Sum_probs=41.1
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
++....++.+++|++++.|++|.-++ +. ..|.+. .+|...++.++ .||+|.|..-+..+
T Consensus 216 ~l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~-~~g~~~~~~~D-~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 216 IIKKRLKKKGVEVVTNALAKGAEERE--DG-VTVTYE-ANGETKTIDAD-YVLVTVGRRPNTDE 274 (455)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEEEET--TE-EEEEEE-ETTEEEEEEES-EEEECSCEEESCSS
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEeC--Ce-EEEEEE-eCCceeEEEcC-EEEECcCCCcccCc
Confidence 33333456799999999999998763 33 344444 24555678897 89999998766655
No 143
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=46.98 E-value=12 Score=38.64 Aligned_cols=61 Identities=20% Similarity=0.294 Sum_probs=42.3
Q ss_pred HhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH--HHHcCC
Q psy10663 198 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 266 (572)
Q Consensus 198 l~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L--Ll~SgI 266 (572)
+....++.+++|++++.|++|..++ +++ .|.+. +|+ ++.++ .||+|.|..-...+ |...||
T Consensus 238 l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~--~g~--~i~aD-~Vi~A~G~~p~~~~l~l~~~g~ 300 (484)
T 3o0h_A 238 LNDAMVAKGISIIYEATVSQVQSTE--NCY-NVVLT--NGQ--TICAD-RVMLATGRVPNTTGLGLERAGV 300 (484)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEECS--SSE-EEEET--TSC--EEEES-EEEECCCEEECCTTCCHHHHTC
T ss_pred HHHHHHHCCCEEEeCCEEEEEEeeC--CEE-EEEEC--CCc--EEEcC-EEEEeeCCCcCCCCCChhhcCc
Confidence 3333456799999999999998763 333 45443 564 67786 89999998766665 455554
No 144
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=46.21 E-value=3.9 Score=42.49 Aligned_cols=43 Identities=19% Similarity=0.075 Sum_probs=22.9
Q ss_pred CceeccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCCCCc
Q psy10663 510 FRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPVNVT 556 (572)
Q Consensus 510 ~rV~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~~~~ 556 (572)
.+.-.++|||.|++|++|-. +++ -++.=+.++|+.|++++...
T Consensus 452 ~~~t~i~gLyl~G~~t~pG~-Gv~---ga~~SG~~aA~~il~dL~gG 494 (501)
T 4dgk_A 452 NRDKTITNLYLVGAGTHPGA-GIP---GVIGSAKATAGLMLEDLIGG 494 (501)
T ss_dssp ----CCTTEEECCCH-------HH---HHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCCCCEEEECCCCCCcc-cHH---HHHHHHHHHHHHHHHHhcCC
Confidence 34456899999999998852 211 12233788999998887443
No 145
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=46.18 E-value=12 Score=38.83 Aligned_cols=56 Identities=16% Similarity=0.189 Sum_probs=38.9
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
.+....++.+++|++++.|++|..++ +.+ .| ...+|+ ++.++ .||+|+|..-+..+
T Consensus 228 ~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v-~v--~~~~g~--~i~aD-~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 228 VLEESFAERGVRLFKNARAASVTRTG--AGV-LV--TMTDGR--TVEGS-HALMTIGSVPNTSG 283 (499)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEECS--SSE-EE--EETTSC--EEEES-EEEECCCEEECCSS
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEeC--CEE-EE--EECCCc--EEEcC-EEEECCCCCcCCCc
Confidence 34444456799999999999998653 332 23 323554 57886 89999998766656
No 146
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=46.09 E-value=16 Score=37.46 Aligned_cols=57 Identities=23% Similarity=0.256 Sum_probs=40.7
Q ss_pred eEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH-HHHcCC
Q psy10663 207 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI-LQQSGV 266 (572)
Q Consensus 207 l~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L-Ll~SgI 266 (572)
++|++++.|++|.-+++ +.+. |.+.+.+|+..++.++ .||+|.|..-+..| |..+|+
T Consensus 226 v~i~~~~~v~~i~~~~~-~~v~-v~~~~~~G~~~~i~~D-~vi~a~G~~p~~~l~l~~~gl 283 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKD-DEYE-VIYSTKDGSKKSIFTN-SVVLAAGRRPVIPEGAREIGL 283 (466)
T ss_dssp CCEECSCCEEEEEEEET-TEEE-EEECCTTSCCEEEEES-CEEECCCEEECCCTTTGGGTC
T ss_pred EEEEECCEEEEEEEcCC-CcEE-EEEEecCCceEEEEcC-EEEECcCCCcccccchhhcCc
Confidence 99999999999987631 3432 5554336777788997 89999997765554 455554
No 147
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=44.89 E-value=21 Score=33.96 Aligned_cols=55 Identities=18% Similarity=0.225 Sum_probs=36.6
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcc
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 255 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai 255 (572)
.|+....++.+++++.+++|+.|..+.+.+....|.. .+|+ ++.++ .||+|.|+-
T Consensus 60 ~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~--~~g~--~~~~~-~lv~AtG~~ 114 (310)
T 1fl2_A 60 GALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIET--ASGA--VLKAR-SIIVATGAK 114 (310)
T ss_dssp HHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEE--TTSC--EEEEE-EEEECCCEE
T ss_pred HHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEE--CCCC--EEEeC-EEEECcCCC
Confidence 4555445567999999999999987532122223333 3553 57786 899999983
No 148
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=44.67 E-value=32 Score=34.80 Aligned_cols=47 Identities=26% Similarity=0.391 Sum_probs=34.5
Q ss_pred eEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 207 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 207 l~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.+|++++.|++|..++ +. +.|.+ .+|+ ++.|+ .||+|+.+-...+||
T Consensus 248 ~~i~~~~~V~~i~~~~--~~-~~v~~--~~g~--~~~ad-~vi~a~p~~~~~~l~ 294 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSG--SC-YSLEL--DNGV--TLDAD-SVIVTAPHKAAAGML 294 (470)
T ss_dssp EEEECSCCEEEEEECS--SS-EEEEE--SSSC--EEEES-EEEECSCHHHHHHHT
T ss_pred CEEEeCCceEEEEEcC--Ce-EEEEE--CCCC--EEECC-EEEECCCHHHHHHHc
Confidence 7999999999999874 32 23433 4665 47886 899999887666654
No 149
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=44.62 E-value=21 Score=34.10 Aligned_cols=59 Identities=14% Similarity=0.030 Sum_probs=39.5
Q ss_pred HHhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcch-hhHHH
Q psy10663 195 SIFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN-SVRIL 261 (572)
Q Consensus 195 ~~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~-Tp~LL 261 (572)
..|+.....+.+++++.++.|++|..+.++ ...|.. .+|+ +.++ .||||.|+-. .|+.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~~v~~--~~g~---~~~d-~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 70 INNLKEQMAKFDQTICLEQAVESVEKQADG--VFKLVT--NEET---HYSK-TVIITAGNGAFKPRKL 129 (332)
T ss_dssp HHHHHHHHTTSCCEEECSCCEEEEEECTTS--CEEEEE--SSEE---EEEE-EEEECCTTSCCEECCC
T ss_pred HHHHHHHHHHhCCcEEccCEEEEEEECCCC--cEEEEE--CCCE---EEeC-EEEECCCCCcCCCCCC
Confidence 356655566678999999999999887431 122333 2443 7886 8999999843 45443
No 150
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=44.42 E-value=13 Score=37.97 Aligned_cols=63 Identities=16% Similarity=0.206 Sum_probs=42.1
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH-H-HHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR-I-LQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~-L-Ll~SgI 266 (572)
++....+..+++|++++.|++|.-+++ + ...|++ .+|+ ++.++ .||+|+|.--+.. | |..+|+
T Consensus 213 ~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~-~~~v~~--~~g~--~i~~D-~vv~a~G~~p~~~~l~~~~~gl 277 (450)
T 1ges_A 213 TLVEVMNAEGPQLHTNAIPKAVVKNTD-G-SLTLEL--EDGR--SETVD-CLIWAIGREPANDNINLEAAGV 277 (450)
T ss_dssp HHHHHHHHHSCEEECSCCEEEEEECTT-S-CEEEEE--TTSC--EEEES-EEEECSCEEESCTTSCHHHHTC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEeCC-c-EEEEEE--CCCc--EEEcC-EEEECCCCCcCCCCCCchhcCc
Confidence 333434557999999999999986532 2 234444 3565 67886 8999999765554 4 455554
No 151
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=44.36 E-value=11 Score=38.56 Aligned_cols=50 Identities=16% Similarity=0.187 Sum_probs=35.0
Q ss_pred CeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHH
Q psy10663 206 TVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
+.+|++++.|++|..++ ++ +.|.+.+ .+|+ +++|+ .||+|+++-...+||
T Consensus 249 g~~i~~~~~V~~i~~~~--~~-~~v~~~~~~~g~--~~~ad-~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 249 GDAAHVGARVEGLARED--GG-WRLIIEEHGRRA--ELSVA-QVVLAAPAHATAKLL 299 (478)
T ss_dssp GGGEESSEEEEEEECC----C-CEEEEEETTEEE--EEECS-EEEECSCHHHHHHHH
T ss_pred hhhEEcCCEEEEEEecC--Ce-EEEEEeecCCCc--eEEcC-EEEECCCHHHHHHHh
Confidence 45899999999998764 22 4565532 2343 57896 899999987666665
No 152
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=43.35 E-value=23 Score=35.81 Aligned_cols=55 Identities=15% Similarity=0.143 Sum_probs=39.2
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhh
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSV 258 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp 258 (572)
..+....++.++++++++.|++|.-+ +|.+.+.+++..++.++ .||+|.|....+
T Consensus 204 ~~l~~~l~~~GV~i~~~~~v~~v~~~-------~v~~~~~~~~g~~i~~D-~vv~a~G~~~~~ 258 (430)
T 3h28_A 204 RLVEDLFAERNIDWIANVAVKAIEPD-------KVIYEDLNGNTHEVPAK-FTMFMPSFQGPE 258 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEECSS-------EEEEECTTSCEEEEECS-EEEEECEEECCH
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEeCC-------eEEEEecCCCceEEeee-EEEECCCCccch
Confidence 34444456689999999999998432 25555445666788997 899999976554
No 153
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=43.34 E-value=17 Score=37.23 Aligned_cols=46 Identities=13% Similarity=0.266 Sum_probs=35.2
Q ss_pred eEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 207 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 207 l~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.+|++++.|++|..++ +. +.+...+| ++.|+ .||+|+++-...+||
T Consensus 249 ~~i~~~~~V~~i~~~~--~~---~~v~~~~g---~~~ad-~vV~a~p~~~~~~ll 294 (475)
T 3lov_A 249 SEIRLETPLLAISRED--GR---YRLKTDHG---PEYAD-YVLLTIPHPQVVQLL 294 (475)
T ss_dssp CEEESSCCCCEEEEET--TE---EEEECTTC---CEEES-EEEECSCHHHHHHHC
T ss_pred CEEEcCCeeeEEEEeC--CE---EEEEECCC---eEECC-EEEECCCHHHHHHHc
Confidence 6999999999999874 33 44443466 58896 899999987777765
No 154
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=43.08 E-value=30 Score=33.16 Aligned_cols=58 Identities=17% Similarity=0.039 Sum_probs=37.5
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcch-hhHHH
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN-SVRIL 261 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~-Tp~LL 261 (572)
.++.....+.+++++.++.|++|..++ + .+.+...+|. ++.++ .||+|.|+-. .|+.+
T Consensus 69 ~~l~~~~~~~~~~~~~~~~v~~i~~~~--~---~~~v~~~~g~--~~~~~-~lv~AtG~~~~~p~~~ 127 (335)
T 2zbw_A 69 KGLVEQVAPFNPVYSLGERAETLEREG--D---LFKVTTSQGN--AYTAK-AVIIAAGVGAFEPRRI 127 (335)
T ss_dssp HHHHHHHGGGCCEEEESCCEEEEEEET--T---EEEEEETTSC--EEEEE-EEEECCTTSEEEECCC
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEECC--C---EEEEEECCCC--EEEeC-EEEECCCCCCCCCCCC
Confidence 344433445578999999999998874 3 2333323453 57786 8999999843 45443
No 155
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=42.55 E-value=38 Score=35.51 Aligned_cols=47 Identities=17% Similarity=0.226 Sum_probs=34.8
Q ss_pred EeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhH
Q psy10663 209 VSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 209 i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
|+.+++|++|..++ +.++ |++.+ .+|+..+++|+ -||.|.|+--+.|
T Consensus 152 v~~~~~v~~~~~~~--~~v~-v~~~~~~~G~~~~i~a~-~vVgADG~~S~vR 199 (549)
T 2r0c_A 152 LRTRSRLDSFEQRD--DHVR-ATITDLRTGATRAVHAR-YLVACDGASSPTR 199 (549)
T ss_dssp EECSEEEEEEEECS--SCEE-EEEEETTTCCEEEEEEE-EEEECCCTTCHHH
T ss_pred cccCcEEEEEEEeC--CEEE-EEEEECCCCCEEEEEeC-EEEECCCCCcHHH
Confidence 99999999998874 3343 66664 24777789996 8999999865443
No 156
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=42.02 E-value=8.9 Score=38.69 Aligned_cols=43 Identities=14% Similarity=0.200 Sum_probs=30.8
Q ss_pred CeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchh
Q psy10663 206 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS 257 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~T 257 (572)
+.+|++++.|++|..++ ++++ |.. .+|+ ++|+ .||+|+++-..
T Consensus 217 ~~~v~~~~~V~~i~~~~--~~v~-v~~--~~g~---~~ad-~Vv~a~~~~~~ 259 (424)
T 2b9w_A 217 EHPAERNVDITRITRED--GKVH-IHT--TDWD---RESD-VLVLTVPLEKF 259 (424)
T ss_dssp SSCCBCSCCEEEEECCT--TCEE-EEE--SSCE---EEES-EEEECSCHHHH
T ss_pred cceEEcCCEEEEEEEEC--CEEE-EEE--CCCe---EEcC-EEEECCCHHHH
Confidence 34789999999998763 4443 443 3453 6886 89999998644
No 157
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=41.07 E-value=40 Score=38.57 Aligned_cols=61 Identities=15% Similarity=0.263 Sum_probs=44.6
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEc----CCC-------ceeEeeccceeEeccCcc-hhhHHHHH-cCC
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN----PQG-------KTIKVNANREVVLAANSI-NSVRILQQ-SGV 266 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~----~~g-------~~~~v~A~k~VILaAGai-~Tp~LLl~-SgI 266 (572)
...++++++++.+.+|..+ ++++++|++.+ .+| .+.++.++ .||+|.|.. .++.|+.. +||
T Consensus 381 ~~~Gv~~~~~~~~~~i~~~--~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD-~Vi~A~G~~~~~~~l~~~~~gl 454 (1025)
T 1gte_A 381 KEEKCEFLPFLSPRKVIVK--GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKAD-VVISAFGSVLRDPKVKEALSPI 454 (1025)
T ss_dssp HHTTCEEECSEEEEEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEECS-EEEECSCEECCCHHHHHHTTTS
T ss_pred HHcCCEEEeCCCceEEEcc--CCeEEEEEEEEeEEcCCCCcccCCCceEEEECC-EEEECCCCCCCchhhhhcccCc
Confidence 3468999999999999865 57888887752 233 34678897 899999985 45666654 454
No 158
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=40.96 E-value=33 Score=36.01 Aligned_cols=64 Identities=9% Similarity=0.306 Sum_probs=44.2
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeC-----------------CCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDE-----------------TKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~-----------------~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
++....++.++++++++.|++|..+. ++++++ |.+ .+|+ ++.++ .||+|.|..-++.
T Consensus 197 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~--~~g~--~i~~D-~vi~a~G~~p~~~ 270 (565)
T 3ntd_A 197 FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTL--SNGE--LLETD-LLIMAIGVRPETQ 270 (565)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEE--TTSC--EEEES-EEEECSCEEECCH
T ss_pred HHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEE--cCCC--EEEcC-EEEECcCCccchH
Confidence 34444556899999999999998741 123332 333 3565 67887 8999999887777
Q ss_pred HHHHcCC
Q psy10663 260 ILQQSGV 266 (572)
Q Consensus 260 LLl~SgI 266 (572)
||..+|+
T Consensus 271 l~~~~g~ 277 (565)
T 3ntd_A 271 LARDAGL 277 (565)
T ss_dssp HHHHHTC
T ss_pred HHHhCCc
Confidence 7766665
No 159
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=39.93 E-value=23 Score=36.28 Aligned_cols=41 Identities=20% Similarity=0.223 Sum_probs=30.4
Q ss_pred CeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 206 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
+.+|++++.|++|..++ +.++ |.+ .+|+ +++|+ .||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~--~~v~-v~~--~~g~--~~~ad-~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSP--GGVT-VKT--EDNS--VYSAD-YVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECS--SCEE-EEE--TTSC--EEEES-EEEECSCH
T ss_pred ccEEEcCCEEEEEEEcC--CcEE-EEE--CCCC--EEEcC-EEEEecCH
Confidence 56899999999999874 3343 443 3665 56886 89999985
No 160
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=39.60 E-value=17 Score=37.77 Aligned_cols=57 Identities=11% Similarity=0.182 Sum_probs=39.2
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
++....++.+++|++++.|++|.-+++ +. ..|++ .+|++ ++.++ .||+|.|..-.+.
T Consensus 222 ~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~-~~v~~--~~g~~-~~~~D-~vi~a~G~~p~~~ 278 (500)
T 1onf_A 222 VLENDMKKNNINIVTFADVVEIKKVSD-KN-LSIHL--SDGRI-YEHFD-HVIYCVGRSPDTE 278 (500)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESST-TC-EEEEE--TTSCE-EEEES-EEEECCCBCCTTT
T ss_pred HHHHHHHhCCCEEEECCEEEEEEEcCC-ce-EEEEE--CCCcE-EEECC-EEEECCCCCcCCC
Confidence 343444567999999999999976532 32 34444 36654 48887 8999999765553
No 161
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=39.21 E-value=23 Score=37.61 Aligned_cols=60 Identities=13% Similarity=0.247 Sum_probs=43.3
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
.+....++.+++|++++.|++|.-+ ++ +|.+. +|+ ++.++ .||+|.|..-++.+|..+|+
T Consensus 233 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~---~v~~~--~g~--~i~~D-~Vi~a~G~~p~~~~l~~~g~ 292 (588)
T 3ics_A 233 YVHEHMKNHDVELVFEDGVDALEEN--GA---VVRLK--SGS--VIQTD-MLILAIGVQPESSLAKGAGL 292 (588)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEGG--GT---EEEET--TSC--EEECS-EEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHHcCCEEEECCeEEEEecC--CC---EEEEC--CCC--EEEcC-EEEEccCCCCChHHHHhcCc
Confidence 3334445689999999999999754 23 35443 554 57787 89999998877777776665
No 162
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=38.89 E-value=37 Score=34.76 Aligned_cols=44 Identities=20% Similarity=0.201 Sum_probs=31.4
Q ss_pred eEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcc
Q psy10663 207 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 255 (572)
Q Consensus 207 l~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai 255 (572)
.+|++++.|++|..++ ++++ |.+.+ .+...+++|+ .||+|+..-
T Consensus 252 ~~i~~~~~V~~i~~~~--~~v~-v~~~~-g~~~~~~~ad-~vI~a~p~~ 295 (489)
T 2jae_A 252 DNIVFGAEVTSMKNVS--EGVT-VEYTA-GGSKKSITAD-YAICTIPPH 295 (489)
T ss_dssp GGEETTCEEEEEEEET--TEEE-EEEEE-TTEEEEEEES-EEEECSCHH
T ss_pred CeEEECCEEEEEEEcC--CeEE-EEEec-CCeEEEEECC-EEEECCCHH
Confidence 6799999999999874 4443 55542 2344578896 899998653
No 163
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=38.87 E-value=21 Score=36.92 Aligned_cols=56 Identities=13% Similarity=0.134 Sum_probs=41.7
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
++.+++|++++.|++|.-+ +++.+|.. .+| .++.++ .||+|+|..-+..||..+|+
T Consensus 268 ~~~GV~v~~~~~v~~i~~~---~~v~~v~~--~~g--~~i~aD-~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 268 ERWGIDYVHIPNVKRVEGN---EKVERVID--MNN--HEYKVD-ALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHTCEEEECSSEEEEECS---SSCCEEEE--TTC--CEEECS-EEEECCCEEECCHHHHHTTC
T ss_pred HhCCcEEEeCCeeEEEecC---CceEEEEe--CCC--eEEEeC-EEEECCCcCcCchHHHhcCC
Confidence 4568999999999999744 33555653 355 367886 89999998877778777764
No 164
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=38.54 E-value=19 Score=37.41 Aligned_cols=57 Identities=11% Similarity=0.182 Sum_probs=38.2
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCc--eeEeeccceeEeccCcchhhH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGK--TIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~--~~~v~A~k~VILaAGai~Tp~ 259 (572)
++....++.+++|++++.|++|.-+ +....+ ...+|+ ..+|.++ .||.|+|.--+|.
T Consensus 277 ~~~~~L~~~GV~v~~~~~v~~v~~~---~~~~~~--~~~dg~~~~~~i~ad-~viwa~Gv~~~~~ 335 (502)
T 4g6h_A 277 YAQSHLENTSIKVHLRTAVAKVEEK---QLLAKT--KHEDGKITEETIPYG-TLIWATGNKARPV 335 (502)
T ss_dssp HHHHHHHHTTCEEETTEEEEEECSS---EEEEEE--ECTTSCEEEEEEECS-EEEECCCEECCHH
T ss_pred HHHHHHHhcceeeecCceEEEEeCC---ceEEEE--EecCcccceeeeccC-EEEEccCCcCCHH
Confidence 4444455679999999999998422 222222 224554 3678997 9999999776653
No 165
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=36.99 E-value=22 Score=36.99 Aligned_cols=44 Identities=20% Similarity=0.163 Sum_probs=31.9
Q ss_pred ccCCCCceeccCCceEe-cccCCCCCCCcchHHHHHHHHHHHHHHhhC
Q psy10663 505 VVGPDFRVNGFSNLRVV-GEPVIPVEMVTDSSAVALMLAERCATFIQS 551 (572)
Q Consensus 505 VVD~~~rV~g~~nL~V~-D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~ 551 (572)
+||+++|+-+++|+|++ |++..|..+.+. ..+.-|..+|+.|..
T Consensus 354 ~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 354 AVNDFLQVKGSNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDK 398 (502)
T ss_dssp EBCTTSBBTTCSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHH
T ss_pred eECCccccCCCCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHH
Confidence 69999999999999987 666777655443 345556667776643
No 166
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=36.69 E-value=38 Score=32.96 Aligned_cols=59 Identities=22% Similarity=0.113 Sum_probs=38.3
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcch-hhHHH
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN-SVRIL 261 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~-Tp~LL 261 (572)
.++.....+.+++++.++.|++|..+++ + ...|.. .+|+ ++.++ .||+|.|+-. .|+.+
T Consensus 78 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~-~~~v~~--~~g~--~~~~~-~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 78 ESLWAQAERYNPDVVLNETVTKYTKLDD-G-TFETRT--NTGN--VYRSR-AVLIAAGLGAFEPRKL 137 (360)
T ss_dssp HHHHHHHHTTCCEEECSCCEEEEEECTT-S-CEEEEE--TTSC--EEEEE-EEEECCTTCSCCBCCC
T ss_pred HHHHHHHHHhCCEEEcCCEEEEEEECCC-c-eEEEEE--CCCc--EEEee-EEEEccCCCcCCCCCC
Confidence 3444434556899999999999988743 2 122332 3553 57786 8999999854 45444
No 167
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=36.68 E-value=42 Score=33.37 Aligned_cols=54 Identities=17% Similarity=0.107 Sum_probs=36.2
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
.+|...+.. ++|+.+++|++|..++ +. |.+...+|+ +++|+ .||.|.|+--.-+
T Consensus 131 ~~L~~~~~~--~~i~~~~~v~~i~~~~--~~---v~v~~~~g~--~~~a~-~vV~AdG~~S~vr 184 (407)
T 3rp8_A 131 REMLDYWGR--DSVQFGKRVTRCEEDA--DG---VTVWFTDGS--SASGD-LLIAADGSHSALR 184 (407)
T ss_dssp HHHHHHHCG--GGEEESCCEEEEEEET--TE---EEEEETTSC--EEEES-EEEECCCTTCSSH
T ss_pred HHHHHhCCc--CEEEECCEEEEEEecC--Cc---EEEEEcCCC--EEeeC-EEEECCCcChHHH
Confidence 444443333 8999999999999874 33 333334665 68886 8999998754433
No 168
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=35.61 E-value=7.9 Score=40.05 Aligned_cols=21 Identities=29% Similarity=0.422 Sum_probs=18.5
Q ss_pred ccccccCCCCCeEEEEcccCCC
Q psy10663 2 LTAKLLAQSGCSVLILEAGPDA 23 (572)
Q Consensus 2 ~A~rLae~~g~~VLvLEaG~~~ 23 (572)
+|.+|+++ |++|+|||+++..
T Consensus 35 ~a~~l~~~-g~~v~~~e~~~~~ 55 (475)
T 3p1w_A 35 LSGLLSHY-GKKILVLDRNPYY 55 (475)
T ss_dssp HHHHHHHT-TCCEEEECSSSSS
T ss_pred HHHHHHHC-CCcEEEEeccCCC
Confidence 68899975 9999999999875
No 169
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=34.89 E-value=8.5 Score=38.78 Aligned_cols=36 Identities=17% Similarity=0.066 Sum_probs=24.1
Q ss_pred eccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhh
Q psy10663 513 NGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQ 550 (572)
Q Consensus 513 ~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~ 550 (572)
..++|||+|+.++.|..+.. .--+++=|.++|++|+
T Consensus 389 ~p~~gL~laG~~~~~~gg~g--v~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 389 TPFSGLYVVGDGAKGKGGIE--VEGVALGVMSVMEKVL 424 (425)
T ss_dssp CSSBTEEECSTTSCCTTCCH--HHHHHHHHHHHHHC--
T ss_pred CCcCCeEEeCCccCCCCCCc--cHHHHHHHHHHHHHhh
Confidence 45789999999999855443 3344555667787765
No 170
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=34.88 E-value=40 Score=38.25 Aligned_cols=61 Identities=21% Similarity=0.192 Sum_probs=46.3
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEc--C---CCceeEeeccceeEeccCcchhhHHHHHcC
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN--P---QGKTIKVNANREVVLAANSINSVRILQQSG 265 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~--~---~g~~~~v~A~k~VILaAGai~Tp~LLl~Sg 265 (572)
+..+++|++++.|++|.-++ .+++.+|++.+ . +|+..++.++ .||+|.|-.-+..||...+
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~-~~~v~~v~~~~~~~~~~~G~~~~i~~D-~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADE-NGELSAIVVAELDEARELGGTQRFEAD-VLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHTTCCEEETEEEEEEEECT-TSCEEEEEEEEECTTCCEEEEEEEECS-EEEEECCEEECCHHHHHTT
T ss_pred HhCCeEEEeCCEeEEEeccC-CCCEEEEEEEeccccCCCCceEEEEcC-EEEECCCcCcChHHHHhCC
Confidence 45799999999999997632 25688888874 2 3556789997 8999999877777765544
No 171
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=34.77 E-value=41 Score=33.51 Aligned_cols=49 Identities=14% Similarity=0.235 Sum_probs=35.1
Q ss_pred hhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 199 RAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 199 ~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
.....+.+++++.+ +|++|..+ +. .|.+.+..++..++.++ .||+|.|+
T Consensus 63 ~~~~~~~gv~~~~~-~v~~i~~~--~~---~V~~~~g~~~~~~~~~d-~lViAtG~ 111 (409)
T 3h8l_A 63 SEALPEKGIQFQEG-TVEKIDAK--SS---MVYYTKPDGSMAEEEYD-YVIVGIGA 111 (409)
T ss_dssp HHHTGGGTCEEEEC-EEEEEETT--TT---EEEEECTTSCEEEEECS-EEEECCCC
T ss_pred HHHHhhCCeEEEEe-eEEEEeCC--CC---EEEEccCCcccceeeCC-EEEECCCC
Confidence 33344578999987 99998765 33 35565444556778996 89999998
No 172
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=34.75 E-value=8.3 Score=39.57 Aligned_cols=22 Identities=23% Similarity=0.250 Sum_probs=18.7
Q ss_pred CccccccCCCCCeEEEEcccCCC
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDA 23 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~ 23 (572)
++|.+|+++ |++|+|||+....
T Consensus 25 ~aA~~La~~-G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 25 ILSGLLSVD-GKKVLHIDKQDHY 46 (453)
T ss_dssp HHHHHHHHT-TCCEEEECSSSSS
T ss_pred HHHHHHHHC-CCeEEEEeCCCCC
Confidence 368899975 9999999998765
No 173
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=34.46 E-value=29 Score=37.71 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=39.9
Q ss_pred hhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHH
Q psy10663 200 AIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQ 263 (572)
Q Consensus 200 ~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~ 263 (572)
...++.+++|++++.|++|.-+ + ..|+.. .++...++.++ .||+|+|..-+..|+..
T Consensus 575 ~~l~~~GV~i~~~~~V~~i~~~--~---~~v~~~-~~~~~~~i~aD-~VV~A~G~~p~~~l~~~ 631 (690)
T 3k30_A 575 RRLIENGVARVTDHAVVAVGAG--G---VTVRDT-YASIERELECD-AVVMVTARLPREELYLD 631 (690)
T ss_dssp HHHHHTTCEEEESEEEEEEETT--E---EEEEET-TTCCEEEEECS-EEEEESCEEECCHHHHH
T ss_pred HHHHHCCCEEEcCcEEEEEECC--e---EEEEEc-cCCeEEEEECC-EEEECCCCCCChHHHHH
Confidence 3345679999999999998632 1 122222 35566788997 89999998877666543
No 174
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=34.30 E-value=18 Score=35.88 Aligned_cols=57 Identities=21% Similarity=0.337 Sum_probs=41.0
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
++....++.+++|++++.|++|. . . +|++. +|+ +.++ .||+|.|..-+..||..+|+
T Consensus 188 ~l~~~l~~~gV~i~~~~~v~~i~--~--~---~v~~~--~g~---i~~D-~vi~a~G~~p~~~ll~~~gl 244 (367)
T 1xhc_A 188 MIKDMLEETGVKFFLNSELLEAN--E--E---GVLTN--SGF---IEGK-VKICAIGIVPNVDLARRSGI 244 (367)
T ss_dssp HHHHHHHHTTEEEECSCCEEEEC--S--S---EEEET--TEE---EECS-CEEEECCEEECCHHHHHTTC
T ss_pred HHHHHHHHCCCEEEcCCEEEEEE--e--e---EEEEC--CCE---EEcC-EEEECcCCCcCHHHHHhCCC
Confidence 44444556799999999999986 1 2 35443 453 7887 89999998777667766665
No 175
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=33.97 E-value=7.2 Score=40.46 Aligned_cols=50 Identities=14% Similarity=0.191 Sum_probs=33.7
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
....+++|.+++.|++|..+ ++++ .+ .+|+ ++.|+ .||.+.-.=...++|
T Consensus 232 l~~~g~~i~~~~~V~~I~~~--~~~v---~~--~~G~--~~~ad-~vI~t~P~~~l~~~l 281 (513)
T 4gde_A 232 LPKEKTRFGEKGKVTKVNAN--NKTV---TL--QDGT--TIGYK-KLVSTMAVDFLAEAM 281 (513)
T ss_dssp SCGGGEEESGGGCEEEEETT--TTEE---EE--TTSC--EEEEE-EEEECSCHHHHHHHT
T ss_pred HHhcCeeeecceEEEEEEcc--CCEE---EE--cCCC--EEECC-EEEECCCHHHHHHhc
Confidence 46679999999999999877 4543 23 4665 56786 677665544444443
No 176
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=33.86 E-value=8.8 Score=37.92 Aligned_cols=22 Identities=18% Similarity=0.273 Sum_probs=18.4
Q ss_pred CccccccCCCCCeEEEEcccCCC
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDA 23 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~ 23 (572)
++|..|+++ |++|+|||+.+..
T Consensus 18 ~~A~~La~~-G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 18 TAARYAAKY-GLKTLMIEKRPEI 39 (397)
T ss_dssp HHHHHHHHT-TCCEEEECSSSST
T ss_pred HHHHHHHHC-CCcEEEEeCCCCC
Confidence 368899976 9999999998654
No 177
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=33.70 E-value=29 Score=36.05 Aligned_cols=61 Identities=15% Similarity=0.010 Sum_probs=46.0
Q ss_pred CccccccccccCCCCCCCccCCCCceeccCCceEecc---cCC-CCCCCcchHHHHHHHHHHHHHHhhCC
Q psy10663 487 TNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGE---PVI-PVEMVTDSSAVALMLAERCATFIQSP 552 (572)
Q Consensus 487 ~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D~---Sv~-P~~~~~NP~lTi~AlA~r~ad~I~~~ 552 (572)
.+|.+|+.+.-.+ .-|+|.++++ ++|||.++- +++ ..-+++|..+..+..+.++++++.+.
T Consensus 445 ~~~t~GGl~~d~~---~~Vl~~~g~~--I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~~ 509 (510)
T 4at0_A 445 LGFTLGGLRTTVN---SEVLHVSGEP--IPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAKQ 509 (510)
T ss_dssp EEEECCEECBCTT---CEEEBTTSSE--EEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccCcCeeECCC---CceECCCCCC--cCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHhc
Confidence 3567777777642 3688888776 899999974 566 34467888899999999999988653
No 178
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=32.69 E-value=38 Score=35.23 Aligned_cols=54 Identities=20% Similarity=0.254 Sum_probs=36.3
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
.++.....+.+++++.+++|++|..+.+.+....|.+ .+|. +++++ .||+|.|+
T Consensus 271 ~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~--~~g~--~~~~d-~vVlAtG~ 324 (521)
T 1hyu_A 271 GALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIET--ASGA--VLKAR-SIIIATGA 324 (521)
T ss_dssp HHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEE--TTSC--EEEEE-EEEECCCE
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEE--CCCC--EEEcC-EEEECCCC
Confidence 3454445567999999999999986532122233433 3554 57786 89999997
No 179
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=32.04 E-value=28 Score=35.93 Aligned_cols=56 Identities=13% Similarity=0.154 Sum_probs=39.8
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++....++.+++|++++.|++|.-+ +++..|.. +|+ ++.++ .||+|.|..-+..+|
T Consensus 241 ~l~~~l~~~GV~i~~~~~v~~i~~~---~~v~~v~~---~g~--~i~~D-~Vi~a~G~~p~~~ll 296 (490)
T 2bc0_A 241 LMAKNMEEHGIQLAFGETVKEVAGN---GKVEKIIT---DKN--EYDVD-MVILAVGFRPNTTLG 296 (490)
T ss_dssp HHHHHHHTTTCEEEETCCEEEEECS---SSCCEEEE---SSC--EEECS-EEEECCCEEECCGGG
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEcC---CcEEEEEE---CCc--EEECC-EEEECCCCCcChHHH
Confidence 4444456679999999999999742 34445544 453 57887 899999987666654
No 180
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=31.99 E-value=46 Score=34.11 Aligned_cols=44 Identities=25% Similarity=0.303 Sum_probs=30.3
Q ss_pred EEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcc
Q psy10663 208 QVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 255 (572)
Q Consensus 208 ~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai 255 (572)
+|++++.|++|..++ +. +.|.+.+..+...+++|+ .||+|++.-
T Consensus 254 ~i~~~~~V~~I~~~~--~~-v~v~~~~~~~~~~~~~ad-~vI~t~p~~ 297 (498)
T 2iid_A 254 KVHFNAQVIKIQQND--QK-VTVVYETLSKETPSVTAD-YVIVCTTSR 297 (498)
T ss_dssp GEESSCEEEEEEECS--SC-EEEEEECSSSCCCEEEES-EEEECSCHH
T ss_pred ccccCCEEEEEEECC--Ce-EEEEEecCCcccceEEeC-EEEECCChH
Confidence 799999999999874 33 245555222222367896 899999853
No 181
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=31.83 E-value=10 Score=38.23 Aligned_cols=32 Identities=13% Similarity=0.019 Sum_probs=22.6
Q ss_pred CCceEecccCCCCCCCcchHHHHHHHHHHHHHHh
Q psy10663 516 SNLRVVGEPVIPVEMVTDSSAVALMLAERCATFI 549 (572)
Q Consensus 516 ~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I 549 (572)
+|||+|+.++-|..+ =-.=-+++=|.++|+.|
T Consensus 372 ~gl~laGd~~~~~~g--~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 372 NEVLVVGDGYRPPGG--IEVDGIALGVMKALEKL 403 (421)
T ss_dssp SSEEECSTTCCCTTC--CHHHHHHHHHHHHHHHT
T ss_pred CcEEEECCcccCCCc--eeeehHHHHHHHHHHHh
Confidence 899999999975411 11124566678899988
No 182
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=31.69 E-value=40 Score=35.05 Aligned_cols=63 Identities=14% Similarity=0.048 Sum_probs=41.5
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCC-CEEEEEEEEcCCC-ceeEeeccceeEeccCcchhhHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETK-TKVTGVEFRNPQG-KTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~-~~a~gV~~~~~~g-~~~~v~A~k~VILaAGai~Tp~L 260 (572)
++....++.+++|++++.|++|.-..++ .....|.+.+.+| +..++.++ .||+|.|-.-+..+
T Consensus 255 ~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D-~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 255 KIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYN-TVMLAIGRDACTRK 319 (519)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEES-EEEECSCEEESCSS
T ss_pred HHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECC-EEEEecCCcccCCC
Confidence 3333345689999999999998754321 1233455554455 44678887 89999997665554
No 183
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=31.63 E-value=9.4 Score=37.33 Aligned_cols=32 Identities=16% Similarity=0.194 Sum_probs=23.7
Q ss_pred ccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhC
Q psy10663 514 GFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQS 551 (572)
Q Consensus 514 g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~ 551 (572)
+.+||+++-| .+.+=..+..++|+.+||.|.+
T Consensus 338 ~~~~l~~~~G------~~~~G~t~ap~~a~~~a~~i~~ 369 (369)
T 3dme_A 338 GVAGLVNLYG------IESPGLTASLAIAEETLARLAA 369 (369)
T ss_dssp CCTTEEEEEC------CCTTHHHHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEeC------CCCchHhccHHHHHHHHHHhhC
Confidence 5688888753 3556677788899999998853
No 184
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=31.60 E-value=9.8 Score=38.45 Aligned_cols=21 Identities=33% Similarity=0.425 Sum_probs=17.6
Q ss_pred CccccccCCCCCeEEEEcccCC
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPD 22 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~ 22 (572)
++|.+|+++ |++|+|||+...
T Consensus 15 ~aA~~L~~~-G~~V~vlE~~~~ 35 (431)
T 3k7m_X 15 KAARDLTNA-GKKVLLLEGGER 35 (431)
T ss_dssp HHHHHHHHT-TCCEEEECSSSS
T ss_pred HHHHHHHHc-CCeEEEEecCCC
Confidence 368899986 999999999654
No 185
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=31.28 E-value=65 Score=30.32 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=33.4
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
.++.....+.+++++. ++|++|..+. +. +.+...+|+ ++.++ .||+|.|+
T Consensus 63 ~~l~~~~~~~~v~~~~-~~v~~i~~~~--~~---~~v~~~~g~--~~~~~-~vv~AtG~ 112 (311)
T 2q0l_A 63 QPWQEQCFRFGLKHEM-TAVQRVSKKD--SH---FVILAEDGK--TFEAK-SVIIATGG 112 (311)
T ss_dssp HHHHHHHHTTSCEEEC-SCEEEEEEET--TE---EEEEETTSC--EEEEE-EEEECCCE
T ss_pred HHHHHHHHHcCCEEEE-EEEEEEEEcC--CE---EEEEEcCCC--EEECC-EEEECCCC
Confidence 3444444556899988 8999998873 32 223223554 57786 89999996
No 186
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=31.15 E-value=38 Score=34.44 Aligned_cols=55 Identities=16% Similarity=0.201 Sum_probs=37.6
Q ss_pred HhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 198 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 198 l~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
+....+..+++|++++.|++|..++ +. +.|++ .+|+ ++.++ .||+|+|.--...+
T Consensus 214 l~~~l~~~Gv~i~~~~~V~~i~~~~--~~-v~v~~--~~g~--~i~~D-~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 214 AERVFKKQGLTIRTGVRVTAVVPEA--KG-ARVEL--EGGE--VLEAD-RVLVAVGRRPYTEG 268 (455)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEEET--TE-EEEEE--TTSC--EEEES-EEEECSCEEECCTT
T ss_pred HHHHHHHCCCEEEECCEEEEEEEeC--CE-EEEEE--CCCe--EEEcC-EEEECcCCCcCCCC
Confidence 3333445689999999999998763 32 23333 2453 57886 89999998766555
No 187
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=30.35 E-value=9.8 Score=37.94 Aligned_cols=30 Identities=17% Similarity=0.142 Sum_probs=23.0
Q ss_pred cCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCC
Q psy10663 515 FSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSP 552 (572)
Q Consensus 515 ~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~ 552 (572)
.+||||+-| .+-.....++|+.+|+.|..+
T Consensus 345 ~~~l~~a~G--------g~G~~~ap~~g~~la~~i~~~ 374 (397)
T 2oln_A 345 GEKLVVYGA--------GWAFKFVPLFGRICADLAVED 374 (397)
T ss_dssp GGGEEEEEE--------SSCGGGHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC--------cchhhccHHHHHHHHHHHhCC
Confidence 789999987 244555568889999999764
No 188
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=30.00 E-value=44 Score=34.13 Aligned_cols=47 Identities=19% Similarity=0.236 Sum_probs=31.8
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCc
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGa 254 (572)
.++.+++++.+++|++|..+ .+. |.+.+ .+|...++.++ .+|||.|+
T Consensus 76 ~~~~gi~~~~~~~V~~id~~--~~~---v~~~~~~~g~~~~~~~d-~lviAtG~ 123 (472)
T 3iwa_A 76 RINKDVEALVETRAHAIDRA--AHT---VEIENLRTGERRTLKYD-KLVLALGS 123 (472)
T ss_dssp -----CEEECSEEEEEEETT--TTE---EEEEETTTCCEEEEECS-EEEECCCE
T ss_pred hhhcCcEEEECCEEEEEECC--CCE---EEEeecCCCCEEEEECC-EEEEeCCC
Confidence 34578999999999999766 333 33442 35777788896 89999997
No 189
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=29.48 E-value=38 Score=34.35 Aligned_cols=56 Identities=20% Similarity=0.197 Sum_probs=38.7
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++....++.+++|++++.|++|..+ +++..|.. +|. ++.++ .||+|.|.--...+|
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~~---~~v~~v~~---~~~--~i~~d-~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEGD---GRVQKVVT---DKN--AYDAD-LVVVAVGVRPNTAWL 251 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEECS---SBCCEEEE---SSC--EEECS-EEEECSCEEESCGGG
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEcc---CcEEEEEE---CCC--EEECC-EEEECcCCCCChHHH
Confidence 4444455679999999999998754 34444543 343 57886 899999976555544
No 190
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=29.41 E-value=37 Score=34.36 Aligned_cols=47 Identities=23% Similarity=0.242 Sum_probs=32.7
Q ss_pred CeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 206 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
+.+|++++.|++|..++ +.+ |.+.. +|+ +++|+ .||+|++.-...+|
T Consensus 226 g~~i~~~~~V~~i~~~~--~~~--v~v~~-~~~--~~~ad-~VI~a~p~~~~~~l 272 (453)
T 2yg5_A 226 GDDVFLNAPVRTVKWNE--SGA--TVLAD-GDI--RVEAS-RVILAVPPNLYSRI 272 (453)
T ss_dssp GGGEECSCCEEEEEEET--TEE--EEEET-TTE--EEEEE-EEEECSCGGGGGGS
T ss_pred CCcEEcCCceEEEEEeC--Cce--EEEEE-CCe--EEEcC-EEEEcCCHHHHhcC
Confidence 56899999999999874 432 33442 453 67886 89999987544443
No 191
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=29.21 E-value=53 Score=32.25 Aligned_cols=53 Identities=23% Similarity=0.121 Sum_probs=36.3
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhH
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 259 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~ 259 (572)
.+|.......+++|+.+++|++|.. ++ .|.+. +|+ +++++ .||.|.|+--..+
T Consensus 111 ~~L~~~~~~~gv~i~~~~~v~~i~~--~~----~v~~~--~g~--~~~ad-~vV~AdG~~s~vr 163 (379)
T 3alj_A 111 DALVNRARALGVDISVNSEAVAADP--VG----RLTLQ--TGE--VLEAD-LIVGADGVGSKVR 163 (379)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEET--TT----EEEET--TSC--EEECS-EEEECCCTTCHHH
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEe--CC----EEEEC--CCC--EEEcC-EEEECCCccHHHH
Confidence 3444433446899999999999976 23 34443 564 68896 8999999755443
No 192
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=29.14 E-value=54 Score=33.60 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=34.1
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCc
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGa 254 (572)
+..+++++.++.|+.|..+ .+ .|.+.+ .+|+..++.++ .+|||.|+
T Consensus 104 ~~~gv~~~~~~~v~~i~~~--~~---~v~v~~~~~g~~~~~~~d-~lviAtG~ 150 (480)
T 3cgb_A 104 DKYGIDAKVRHEVTKVDTE--KK---IVYAEHTKTKDVFEFSYD-RLLIATGV 150 (480)
T ss_dssp HTTCCEEESSEEEEEEETT--TT---EEEEEETTTCCEEEEECS-EEEECCCE
T ss_pred hhcCCEEEeCCEEEEEECC--CC---EEEEEEcCCCceEEEEcC-EEEECCCC
Confidence 3458999999999998766 33 344443 35766678896 89999996
No 193
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=28.98 E-value=13 Score=36.95 Aligned_cols=22 Identities=18% Similarity=0.181 Sum_probs=18.4
Q ss_pred CccccccCCCCCeEEEEcccCCC
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDA 23 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~ 23 (572)
++|.+|+++ |++|+|||+++..
T Consensus 15 ~~A~~l~~~-g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 15 VCANELKKL-NKKVLVIEKRNHI 36 (367)
T ss_dssp HHHHHHGGG-TCCEEEECSSSSS
T ss_pred HHHHHHHhC-CCcEEEEecCCCC
Confidence 368899986 9999999998654
No 194
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=28.78 E-value=20 Score=36.76 Aligned_cols=49 Identities=24% Similarity=0.199 Sum_probs=35.3
Q ss_pred CCCeEEeccceEEEEEEeCCCCEEEEEEEEc-------C---------CCceeEeeccceeEeccCcch
Q psy10663 204 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-------P---------QGKTIKVNANREVVLAANSIN 256 (572)
Q Consensus 204 ~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-------~---------~g~~~~v~A~k~VILaAGai~ 256 (572)
..+++++.++.+.+|.-+ +++++|++.+ . +|...++.++ .||+|.|.--
T Consensus 314 ~~Gv~~~~~~~~~~i~~~---g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD-~Vi~A~G~~p 378 (456)
T 2vdc_G 314 EEGVEFIWQAAPEGFTGD---TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQAD-LVIKALGFEP 378 (456)
T ss_dssp HTTCEEECCSSSCCEEEE---EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECS-EEEECSCEEC
T ss_pred HCCCEEEeCCCceEEeCC---CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECC-EEEECCCCCC
Confidence 468999999999998743 5666665531 1 3455788997 8999999743
No 195
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=28.56 E-value=42 Score=35.23 Aligned_cols=47 Identities=6% Similarity=0.275 Sum_probs=33.3
Q ss_pred hHHhHhhhcCCCCeEEec--cceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 194 SSIFLRAIKDKNTVQVSK--NSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 194 ~~~yl~~~~~~~nl~i~~--~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
...|++. .+++|++|+. +..|++|.-+ ||... +| ++.++ .||+|+|-
T Consensus 341 ~~~y~~a-l~~~nV~lv~~~~~~I~~it~~-------gv~~~--dG---~~~~D-~IV~ATGf 389 (545)
T 3uox_A 341 ETNYYET-YNRDNVHLVDIREAPIQEVTPE-------GIKTA--DA---AYDLD-VIIYATGF 389 (545)
T ss_dssp ESSHHHH-TTSTTEEEEETTTSCEEEEETT-------EEEES--SC---EEECS-EEEECCCC
T ss_pred CccHHHH-hcCCCEEEEecCCCCceEEccC-------eEEeC--CC---eeecC-EEEECCcc
Confidence 3457754 6889999997 7888887422 45443 66 45776 88888885
No 196
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=28.52 E-value=29 Score=36.05 Aligned_cols=47 Identities=19% Similarity=0.091 Sum_probs=33.2
Q ss_pred CeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 206 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
+.+|++++.|++|..++ ++++ |.. .+|+ ++.|+ .||+|++.-...+|
T Consensus 226 g~~i~~~~~V~~i~~~~--~~v~-v~~--~~g~--~~~ad-~VI~a~p~~~l~~l 272 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTR--ENVL-VET--LNHE--MYEAK-YVISAIPPTLGMKI 272 (520)
T ss_dssp GGGEESSCCEEEEECSS--SSEE-EEE--TTSC--EEEES-EEEECSCGGGGGGS
T ss_pred CCcEEcCCeeEEEEECC--CeEE-EEE--CCCe--EEEeC-EEEECCCHHHHcce
Confidence 57899999999998763 3443 443 4665 46786 89999987554443
No 197
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=27.97 E-value=27 Score=35.70 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=39.1
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++....++.+++|++++.|++|.- +. |.+...+|+..++.++ .||+|.|..-+..+|
T Consensus 217 ~l~~~l~~~gv~i~~~~~v~~i~~----~~---v~v~~~~G~~~~i~~D-~vv~a~G~~p~~~~l 273 (458)
T 1lvl_A 217 PVAESLKKLGIALHLGHSVEGYEN----GC---LLANDGKGGQLRLEAD-RVLVAVGRRPRTKGF 273 (458)
T ss_dssp HHHHHHHHHTCEEETTCEEEEEET----TE---EEEECSSSCCCEECCS-CEEECCCEEECCSSS
T ss_pred HHHHHHHHCCCEEEECCEEEEEEe----CC---EEEEECCCceEEEECC-EEEECcCCCcCCCCC
Confidence 333334557999999999999863 22 3333335655678897 899999987665543
No 198
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=27.44 E-value=31 Score=36.18 Aligned_cols=51 Identities=16% Similarity=0.190 Sum_probs=36.6
Q ss_pred CCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHH
Q psy10663 203 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 203 ~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++.+++++.+++|++|..+ ++. |.+.+ .+|...++.++ .||||.|+ .|+.+
T Consensus 69 ~~~~i~~~~~~~V~~id~~--~~~---v~~~~~~~g~~~~~~~d-~lviAtG~--~p~~p 120 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRA--AKL---VTVRRLLDGSEYQESYD-TLLLSPGA--APIVP 120 (565)
T ss_dssp HHHCCEEETTEEEEEEETT--TTE---EEEEETTTCCEEEEECS-EEEECCCE--EECCC
T ss_pred HhcCcEEEECCEEEEEECC--CCE---EEEEecCCCCeEEEECC-EEEECCCC--CCCCC
Confidence 3468999999999999775 343 33332 34677788896 89999998 45443
No 199
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=27.10 E-value=65 Score=30.31 Aligned_cols=51 Identities=16% Similarity=0.120 Sum_probs=33.9
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcc
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 255 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai 255 (572)
.|+.....+.+++++. +.|++|..+. +. +.+...+|. ++.++ .||||.|+.
T Consensus 74 ~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~---~~v~~~~g~--~~~~d-~lvlAtG~~ 124 (323)
T 3f8d_A 74 KVFNKHIEKYEVPVLL-DIVEKIENRG--DE---FVVKTKRKG--EFKAD-SVILGIGVK 124 (323)
T ss_dssp HHHHHHHHTTTCCEEE-SCEEEEEEC----C---EEEEESSSC--EEEEE-EEEECCCCE
T ss_pred HHHHHHHHHcCCEEEE-EEEEEEEecC--CE---EEEEECCCC--EEEcC-EEEECcCCC
Confidence 4554445567899999 9999998763 22 223323444 66786 899999986
No 200
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=27.03 E-value=51 Score=33.24 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=34.3
Q ss_pred CccCCCCceeccCCceEe-cccCCCCCC-----Ccch-H-HHHHHHHHHHHHHhhCCCCC
Q psy10663 504 AVVGPDFRVNGFSNLRVV-GEPVIPVEM-----VTDS-S-AVALMLAERCATFIQSPVNV 555 (572)
Q Consensus 504 ~VVD~~~rV~g~~nL~V~-D~Sv~P~~~-----~~NP-~-lTi~AlA~r~ad~I~~~~~~ 555 (572)
=+||+.+|+-+++|+|.+ |.+.+|... ...| + ..+...|.-+|+.|+..+..
T Consensus 275 i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g 334 (430)
T 3hyw_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcC
Confidence 378999999999999987 566676431 2223 2 24555666777777665543
No 201
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=26.82 E-value=83 Score=33.23 Aligned_cols=63 Identities=13% Similarity=0.066 Sum_probs=41.1
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEe-----CC--CCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFD-----ET--KTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~-----~~--~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
++....+..++++++++.+++|.-. .+ .+++ .|.+...+|++..+.++ .||+|.|..-+..+|
T Consensus 331 ~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~~~D-~vi~a~G~~p~~~~l 400 (598)
T 2x8g_A 331 KVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHYTDGKKFEEEFE-TVIFAVGREPQLSKV 400 (598)
T ss_dssp HHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEE-EEEEEETTSCEEEEEES-EEEECSCEEECGGGT
T ss_pred HHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceE-EEEEEeCCCcEEeccCC-EEEEEeCCccccCcc
Confidence 3333345579999999999888532 11 1332 24443347777777797 899999987666554
No 202
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=26.59 E-value=13 Score=36.47 Aligned_cols=37 Identities=22% Similarity=0.245 Sum_probs=27.6
Q ss_pred ceeccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCC
Q psy10663 511 RVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPV 553 (572)
Q Consensus 511 rV~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~ 553 (572)
++-+.+|||++-| -+.+=.....++|+.+|+.|....
T Consensus 322 ~~~~~~~l~~~~G------~~g~G~~~ap~~g~~la~~i~~~~ 358 (372)
T 2uzz_A 322 TLPGHDNTLLITG------LSGHGFKFASVLGEIAADFAQDKK 358 (372)
T ss_dssp EETTEEEEEEECC------CCSCCGGGHHHHHHHHHHHHTTCC
T ss_pred cCCCCCCEEEEeC------CCccchhccHHHHHHHHHHHhCCC
Confidence 3455789999855 455666667789999999998653
No 203
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=26.42 E-value=41 Score=36.31 Aligned_cols=51 Identities=16% Similarity=0.179 Sum_probs=38.5
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.++.|++|++++.|++|. + + +|.+. .+|+..++.++ .||+|.|..-...|+
T Consensus 583 l~~~GV~v~~~~~v~~i~--~--~---~v~~~-~~G~~~~i~~D-~Vi~a~G~~p~~~l~ 633 (671)
T 1ps9_A 583 LLSRGVKMIPGVSYQKID--D--D---GLHVV-INGETQVLAVD-NVVICAGQEPNRALA 633 (671)
T ss_dssp HHHTTCEEECSCEEEEEE--T--T---EEEEE-ETTEEEEECCS-EEEECCCEEECCTTH
T ss_pred HHhcCCEEEeCcEEEEEe--C--C---eEEEe-cCCeEEEEeCC-EEEECCCccccHHHH
Confidence 455799999999999985 2 2 24443 47777789997 899999987666665
No 204
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=26.31 E-value=41 Score=35.52 Aligned_cols=52 Identities=13% Similarity=0.226 Sum_probs=37.5
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCcchhhHHH
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.++.+++++.++.|++|..+ .+. |.+.+ .+|...++.++ .||||.|+ .|+++
T Consensus 103 ~~~~gi~v~~~~~V~~id~~--~~~---v~v~~~~~g~~~~~~~d-~lviAtG~--~p~~p 155 (588)
T 3ics_A 103 SKRFNLDIRVLSEVVKINKE--EKT---ITIKNVTTNETYNEAYD-VLILSPGA--KPIVP 155 (588)
T ss_dssp HHHTTCEEECSEEEEEEETT--TTE---EEEEETTTCCEEEEECS-EEEECCCE--EECCC
T ss_pred HHhcCcEEEECCEEEEEECC--CCE---EEEeecCCCCEEEEeCC-EEEECCCC--CCCCC
Confidence 34578999999999999876 333 34443 35777788896 89999997 45443
No 205
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=26.27 E-value=13 Score=37.69 Aligned_cols=55 Identities=4% Similarity=-0.110 Sum_probs=31.8
Q ss_pred ccccccccccCCCCCCCccCCCCceeccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCC
Q psy10663 488 NHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPV 553 (572)
Q Consensus 488 ~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~ 553 (572)
.+..|-..|-++.. -+++. +-+++|||++-|- +.+-....-++|+.+|+.|..+.
T Consensus 331 ~~~~g~~~~t~D~~--piig~---~p~~~~l~~a~G~------~g~G~~~ap~~g~~la~~i~g~~ 385 (438)
T 3dje_A 331 FARICWCADTANRE--FLIDR---HPQYHSLVLGCGA------SGRGFKYLPSIGNLIVDAMEGKV 385 (438)
T ss_dssp EEEEEEEEECTTSC--CEEEE---CSSCTTEEEEECC------TTCCGGGTTTHHHHHHHHHHTCC
T ss_pred eeeEEEeCcCCCCC--eEEee---cCCCCCEEEEECC------CCcchhhhHHHHHHHHHHHhCCC
Confidence 44555555543222 34443 3357899998662 33444445567888888886653
No 206
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=26.19 E-value=90 Score=33.53 Aligned_cols=44 Identities=14% Similarity=0.189 Sum_probs=31.7
Q ss_pred CeEEeccceEEEEEEeCCCCEEEEEEEEcC--CCceeEeeccceeEeccC
Q psy10663 206 TVQVSKNSEVTKLCFDETKTKVTGVEFRNP--QGKTIKVNANREVVLAAN 253 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~--~g~~~~v~A~k~VILaAG 253 (572)
+++|.+++.|++|..+++ . +.|.+.+. .+...++.|+ .||++..
T Consensus 410 ~l~I~l~~~V~~I~~~~~--~-v~V~~~~~~~~~~~~~~~Ad-~VI~tvP 455 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTAS--G-CEVIAVNTRSTSQTFIYKCD-AVLCTLP 455 (662)
T ss_dssp TCEEETTEEEEEEEEETT--E-EEEEEEESSCTTCEEEEEES-EEEECCC
T ss_pred cCceecCCeEEEEEECCC--c-EEEEEeecccCCCCeEEEeC-EEEECCC
Confidence 679999999999999853 2 34555431 2334678996 8999876
No 207
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=25.84 E-value=47 Score=33.87 Aligned_cols=55 Identities=9% Similarity=0.120 Sum_probs=37.9
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHH
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 260 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~L 260 (572)
.+....++.+++|++++.|++|..+ ++. ..|.+ ++ .++.++ .||+|+|..-...+
T Consensus 221 ~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~-~~v~~---~~--~~i~aD-~Vv~a~G~~p~~~~ 275 (467)
T 1zk7_A 221 AVTAAFRAEGIEVLEHTQASQVAHM--DGE-FVLTT---TH--GELRAD-KLLVATGRTPNTRS 275 (467)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEEE--TTE-EEEEE---TT--EEEEES-EEEECSCEEESCTT
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEe--CCE-EEEEE---CC--cEEEcC-EEEECCCCCcCCCc
Confidence 3434445679999999999999876 332 33433 23 368887 89999998755554
No 208
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=25.73 E-value=1.1e+02 Score=30.41 Aligned_cols=53 Identities=17% Similarity=0.050 Sum_probs=37.5
Q ss_pred CCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHHH
Q psy10663 205 NTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRILQ 262 (572)
Q Consensus 205 ~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LLl 262 (572)
++.+|+.+++|++|.. + ++ + .|.+.+. +|+..+++|+ .||.|.|+--..|=++
T Consensus 122 g~~~v~~~~~v~~i~~-~-~~-v-~v~~~~~~~g~~~~~~ad-~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 122 GQQAVRTGLGVERIEE-R-DG-R-VLIGARDGHGKPQALGAD-VLVGADGIHSAVRAHL 175 (410)
T ss_dssp CTTSEEESEEEEEEEE-E-TT-E-EEEEEEETTSCEEEEEES-EEEECCCTTCHHHHHH
T ss_pred CCcEEEECCEEEEEec-C-Cc-c-EEEEecCCCCCceEEecC-EEEECCCccchhHHHh
Confidence 3468999999999987 3 33 2 3555532 4766789996 8999999876665444
No 209
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=25.30 E-value=15 Score=36.14 Aligned_cols=32 Identities=13% Similarity=0.042 Sum_probs=24.0
Q ss_pred CCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCC
Q psy10663 516 SNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPV 553 (572)
Q Consensus 516 ~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~ 553 (572)
+|||++-| -+.+-.....++|+.+|+.|.+.+
T Consensus 327 ~~~~~a~G------~~g~G~~~a~~~g~~~a~li~~~l 358 (363)
T 1c0p_A 327 VTLVHAYG------FSSAGYQQSWGAAEDVAQLVDEAF 358 (363)
T ss_dssp EEEEEEEC------CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecC------CCCcchheeccHHHHHHHHHHHHH
Confidence 67887644 456777888889999999987643
No 210
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=24.71 E-value=13 Score=37.29 Aligned_cols=23 Identities=26% Similarity=0.410 Sum_probs=18.4
Q ss_pred CccccccCCCCCeEEEEcccCCC
Q psy10663 1 CLTAKLLAQSGCSVLILEAGPDA 23 (572)
Q Consensus 1 v~A~rLae~~g~~VLvLEaG~~~ 23 (572)
++|.+|++++|++|+|||+.+..
T Consensus 21 ~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 21 TIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp HHHHHHHHHSCCCEEEECSSSSS
T ss_pred HHHHHHHHhCCCCEEEEeCCCCC
Confidence 36888986448999999998764
No 211
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=24.69 E-value=64 Score=32.89 Aligned_cols=52 Identities=6% Similarity=0.022 Sum_probs=39.8
Q ss_pred CCeEEeccceEEEEEEeCCCC-EEEEEEEEcC-------------CCceeEeeccceeEeccCcchhh
Q psy10663 205 NTVQVSKNSEVTKLCFDETKT-KVTGVEFRNP-------------QGKTIKVNANREVVLAANSINSV 258 (572)
Q Consensus 205 ~nl~i~~~~~V~~i~~~~~~~-~a~gV~~~~~-------------~g~~~~v~A~k~VILaAGai~Tp 258 (572)
.+++|++++.+.+|.-+++ + ++.+|++.+. +|+..++.++ .||+|.|.--++
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d-~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCG-LVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECS-EEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCCC-CceEEEEEEEEEEEccccCCCcccCCCceEEEEcC-EEEECCCCCCCC
Confidence 7899999999999875532 4 7888877521 3555788997 899999987666
No 212
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=24.29 E-value=17 Score=35.07 Aligned_cols=21 Identities=14% Similarity=0.145 Sum_probs=17.0
Q ss_pred ccccccC-CCCCeEEEEcccCC
Q psy10663 2 LTAKLLA-QSGCSVLILEAGPD 22 (572)
Q Consensus 2 ~A~rLae-~~g~~VLvLEaG~~ 22 (572)
+|.+|++ +.|++|+|+|++..
T Consensus 80 AA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 80 AAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp HHHHHHHHCTTSCEEEECSSSS
T ss_pred HHHHHHHhCCCCeEEEEECCCC
Confidence 6788875 46999999999864
No 213
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=24.18 E-value=16 Score=36.16 Aligned_cols=35 Identities=9% Similarity=0.008 Sum_probs=24.4
Q ss_pred eeccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCC
Q psy10663 512 VNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSP 552 (572)
Q Consensus 512 V~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~ 552 (572)
+-+.+|||++-| -+.+-.....++|+.+|+.|...
T Consensus 330 ~~~~~~l~~a~G------~~g~G~~~ap~~g~~la~~i~~~ 364 (389)
T 2gf3_A 330 HPEHSNVVIAAG------FSGHGFKFSSGVGEVLSQLALTG 364 (389)
T ss_dssp ETTEEEEEEEEC------CTTCCGGGHHHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEEC------CccccccccHHHHHHHHHHHcCC
Confidence 345788998864 23344555678999999999765
No 214
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=23.99 E-value=49 Score=33.74 Aligned_cols=50 Identities=12% Similarity=0.026 Sum_probs=38.1
Q ss_pred CCeEEeccceEEEEEEeCCCCEEEEEEEEc--------------CCCceeEeeccceeEeccCcchhh
Q psy10663 205 NTVQVSKNSEVTKLCFDETKTKVTGVEFRN--------------PQGKTIKVNANREVVLAANSINSV 258 (572)
Q Consensus 205 ~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~--------------~~g~~~~v~A~k~VILaAGai~Tp 258 (572)
.+++|++++.+.+|.-+ +++.+|++.+ .+|+..++.++ .||+|.|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d-~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK---RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQ-LVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS---SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECS-EEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC---CcEeEEEEEEEEecCCCcccccccCCCceEEEEcC-EEEEccccccCC
Confidence 68999999999998743 4566676652 14555678997 899999987766
No 215
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=23.93 E-value=92 Score=30.69 Aligned_cols=51 Identities=24% Similarity=0.225 Sum_probs=35.8
Q ss_pred CCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHH
Q psy10663 205 NTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQ 263 (572)
Q Consensus 205 ~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~ 263 (572)
++++|+.+++|++|..++ +.+ .|.+ .+|+ +++++ .||.|.|+--..|=++.
T Consensus 110 ~~~~i~~~~~v~~i~~~~--~~v-~v~~--~~g~--~~~ad-~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDS--ETV-QMRF--SDGT--KAEAN-WVIGADGGASVVRKRLL 160 (397)
T ss_dssp CSTTEETTCCEEEEEECS--SCE-EEEE--TTSC--EEEES-EEEECCCTTCHHHHHHH
T ss_pred CCcEEEcCCEEEEEEecC--CEE-EEEE--CCCC--EEECC-EEEECCCcchhHHHHhc
Confidence 588999999999998874 333 2444 3564 57886 89999997655554443
No 216
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=23.85 E-value=85 Score=31.65 Aligned_cols=45 Identities=18% Similarity=0.292 Sum_probs=33.3
Q ss_pred CCCeEEeccceEEEEEEeCCCCEEEEEEEEc-CCCceeEeeccceeEeccCc
Q psy10663 204 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 204 ~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~-~~g~~~~v~A~k~VILaAGa 254 (572)
+.+++++.++.|++|..+ .+ .|.+.+ .+|+..++.++ .+|||.|+
T Consensus 68 ~~gv~~~~~~~v~~i~~~--~~---~v~~~~~~~g~~~~~~~d-~lviAtG~ 113 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPK--EH---QVTVKDLVSGEERVENYD-KLIISPGA 113 (447)
T ss_dssp HTTCEEEETEEEEEEETT--TT---EEEEEETTTCCEEEEECS-EEEECCCE
T ss_pred HCCCEEEECCEEEEEeCC--CC---EEEEEecCCCceEEEeCC-EEEEcCCC
Confidence 358999999999998766 33 344543 35666678896 89999996
No 217
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=23.70 E-value=50 Score=34.19 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=28.5
Q ss_pred eEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccC
Q psy10663 207 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAAN 253 (572)
Q Consensus 207 l~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAG 253 (572)
.+|++++.|++|..++ +..+.|++ .+|+ +++|+ .||+|++
T Consensus 215 ~~i~~~~~V~~I~~~~--~~~v~v~~--~~g~--~~~ad-~VI~t~p 254 (516)
T 1rsg_A 215 NWLKLSCEVKSITREP--SKNVTVNC--EDGT--VYNAD-YVIITVP 254 (516)
T ss_dssp GGEETTCCEEEEEECT--TSCEEEEE--TTSC--EEEEE-EEEECCC
T ss_pred CEEEECCEEEEEEEcC--CCeEEEEE--CCCc--EEECC-EEEECCC
Confidence 5799999999999863 22234544 3664 56886 8999985
No 218
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=23.56 E-value=1.1e+02 Score=29.59 Aligned_cols=62 Identities=15% Similarity=0.236 Sum_probs=39.6
Q ss_pred hHhhhcCCC-CeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcC
Q psy10663 197 FLRAIKDKN-TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 265 (572)
Q Consensus 197 yl~~~~~~~-nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~Sg 265 (572)
.+....++. |++|++++.|.+|..++ +. ..|++ .+|+.. ..++ .||+|.|..-+..+|..++
T Consensus 219 ~l~~~l~~~g~v~~~~~~~v~~i~~~~--~~-~~v~~--~~g~~~-~~~d-~vi~a~G~~~~~~~~~~~~ 281 (369)
T 3d1c_A 219 RLGNVIKQGARIEMNVHYTVKDIDFNN--GQ-YHISF--DSGQSV-HTPH-EPILATGFDATKNPIVQQL 281 (369)
T ss_dssp HHHHHHHTTCCEEEECSCCEEEEEEET--TE-EEEEE--SSSCCE-EESS-CCEECCCBCGGGSHHHHHH
T ss_pred HHHHHHhhCCcEEEecCcEEEEEEecC--Cc-eEEEe--cCCeEe-ccCC-ceEEeeccCCccchhhhhh
Confidence 333333456 49999999999997653 32 34544 366532 2345 7999999877776666544
No 219
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=23.51 E-value=16 Score=35.98 Aligned_cols=35 Identities=9% Similarity=-0.030 Sum_probs=24.9
Q ss_pred eccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCC
Q psy10663 513 NGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPV 553 (572)
Q Consensus 513 ~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~ 553 (572)
-+.+|||++.| .+.+-.....++|+.+|+.|....
T Consensus 329 ~~~~~l~~~~G------~~g~G~~~a~~~g~~la~~i~~~~ 363 (382)
T 1ryi_A 329 PEDSRILFAAG------HFRNGILLAPATGALISDLIMNKE 363 (382)
T ss_dssp TTEEEEEEEEC------CSSCTTTTHHHHHHHHHHHHTTCC
T ss_pred CCcCCEEEEEc------CCcchHHHhHHHHHHHHHHHhCCC
Confidence 34689999976 234445556678899999997653
No 220
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=23.16 E-value=70 Score=32.30 Aligned_cols=46 Identities=13% Similarity=0.251 Sum_probs=32.9
Q ss_pred CCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCc
Q psy10663 204 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 254 (572)
Q Consensus 204 ~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGa 254 (572)
+.+++++.+++|++|..+ .+. ..+... ..+...++..+ .+|||.|+
T Consensus 69 ~~~i~~~~~~~V~~id~~--~~~-~~~~~~-~~~~~~~~~yd-~lVIATGs 114 (437)
T 4eqs_A 69 RKQITVKTYHEVIAINDE--RQT-VSVLNR-KTNEQFEESYD-KLILSPGA 114 (437)
T ss_dssp HHCCEEEETEEEEEEETT--TTE-EEEEET-TTTEEEEEECS-EEEECCCE
T ss_pred hcCCEEEeCCeEEEEEcc--CcE-EEEEec-cCCceEEEEcC-EEEECCCC
Confidence 468999999999998765 232 223222 35666778886 79999997
No 221
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=22.49 E-value=1.1e+02 Score=30.83 Aligned_cols=65 Identities=14% Similarity=0.086 Sum_probs=41.6
Q ss_pred HhHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCc---eeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 196 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGK---TIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 196 ~yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~---~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
.++....++.++++++++.|++|.- +.+ -++..+.+|+ ..++.++ .||+|.|....+.+...+|+
T Consensus 212 ~~~~~~l~~~gI~~~~~~~v~~v~~----~~v-~~~~~~~~g~~~~~~~i~~D-~vv~~~g~~~~~~~~~~~gl 279 (437)
T 3sx6_A 212 GILTKGLKEEGIEAYTNCKVTKVED----NKM-YVTQVDEKGETIKEMVLPVK-FGMMIPAFKGVPAVAGVEGL 279 (437)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEET----TEE-EEEEECTTSCEEEEEEEECS-EEEEECCEECCHHHHTSTTT
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEEC----CeE-EEEecccCCccccceEEEEe-EEEEcCCCcCchhhhccccc
Confidence 3444445667999999999999852 222 1222224554 4678887 89999997766554433553
No 222
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=22.12 E-value=1.3e+02 Score=33.55 Aligned_cols=44 Identities=14% Similarity=0.189 Sum_probs=31.2
Q ss_pred CeEEeccceEEEEEEeCCCCEEEEEEEEcC--CCceeEeeccceeEeccC
Q psy10663 206 TVQVSKNSEVTKLCFDETKTKVTGVEFRNP--QGKTIKVNANREVVLAAN 253 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~--~g~~~~v~A~k~VILaAG 253 (572)
.+.|++++.|++|..++ +. +.|.+.+. .+...++.|+ .||++.-
T Consensus 581 ~l~I~Lnt~V~~I~~~~--~g-V~V~~~~~~~~~~g~~i~AD-~VIvTvP 626 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTA--SG-CEVIAVNTRSTSQTFIYKCD-AVLCTLP 626 (852)
T ss_dssp TCCEECSEEEEEEEEET--TE-EEEEEEESSSTTCEEEEEES-EEEECCC
T ss_pred CCCEEeCCeEEEEEEcC--Cc-EEEEEeecccCCCCeEEECC-EEEECCC
Confidence 56899999999999984 33 34555531 2334678996 8998874
No 223
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=22.12 E-value=45 Score=35.11 Aligned_cols=61 Identities=11% Similarity=0.095 Sum_probs=42.5
Q ss_pred CccccccccccCCCCCCCccCCCCceeccCCceEec---ccCCC-CCCCcchHHHHHHHHHHHHHHhhCC
Q psy10663 487 TNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVG---EPVIP-VEMVTDSSAVALMLAERCATFIQSP 552 (572)
Q Consensus 487 ~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D---~Sv~P-~~~~~NP~lTi~AlA~r~ad~I~~~ 552 (572)
.++.+|+.+.-.+ .-|+|.++++ ++|||.++ ++++- .-+++|..+..+..+.++++.+.+.
T Consensus 503 ~~~t~GGl~id~~---~~vl~~~g~~--I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 503 VHHTMGGVMIDTK---AEVMNAKKQV--IPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp EEEECCEEEBCTT---CEEECTTSCE--EEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEecCCeEECCC---ceEECCCCCC--cCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 4455666666531 3566666654 89999987 34554 3457888899999999999988653
No 224
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=21.49 E-value=24 Score=34.49 Aligned_cols=56 Identities=14% Similarity=0.074 Sum_probs=35.5
Q ss_pred CccccccccccCCCCCCCccCCCCceeccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCC
Q psy10663 487 TNHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPV 553 (572)
Q Consensus 487 ~~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~ 553 (572)
..+++|-..|-++.. =+++ ++-+.+|||++-| -+.+=.....++|+.+|+.|..+.
T Consensus 304 ~~~w~G~r~~t~D~~--p~ig---~~~~~~~l~~a~G------~~g~G~~~ap~~g~~la~~i~g~~ 359 (381)
T 3nyc_A 304 EHTWAGLRSFVADGD--LVAG---YAANAEGFFWVAA------QGGYGIQTSAAMGEASAALIRHQP 359 (381)
T ss_dssp SEEEEEEEEECTTSC--CEEE---ECTTSTTEEEEEC------CTTCTTTTHHHHHHHHHHHHTTCC
T ss_pred eeeeEEccccCCCCC--ceec---CCCCCCCeEEEEc------CCChhHhhCHHHHHHHHHHHhCCC
Confidence 456667666654322 2333 2335789999865 334555666788999999997654
No 225
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=21.15 E-value=80 Score=31.85 Aligned_cols=60 Identities=22% Similarity=0.258 Sum_probs=41.0
Q ss_pred hHhhhcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 197 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 197 yl~~~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
++....++. +++++++.|.+|.-+ + ++..| .. +|. ++.++ .||+|.|..-+..+|...|+
T Consensus 195 ~l~~~l~~~-v~i~~~~~v~~i~~~--~-~v~~v-~~--~g~--~i~~D-~Vv~a~G~~p~~~l~~~~gl 254 (449)
T 3kd9_A 195 ILEEKLKKH-VNLRLQEITMKIEGE--E-RVEKV-VT--DAG--EYKAE-LVILATGIKPNIELAKQLGV 254 (449)
T ss_dssp HHHHHHTTT-SEEEESCCEEEEECS--S-SCCEE-EE--TTE--EEECS-EEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHhC-cEEEeCCeEEEEecc--C-cEEEE-Ee--CCC--EEECC-EEEEeeCCccCHHHHHhCCc
Confidence 344444556 999999999998654 2 33333 22 443 67887 89999998866677766664
No 226
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=21.12 E-value=24 Score=36.03 Aligned_cols=32 Identities=9% Similarity=0.091 Sum_probs=22.2
Q ss_pred CCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCC
Q psy10663 516 SNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSP 552 (572)
Q Consensus 516 ~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~ 552 (572)
.||++|+.+. . ..+ .--++.-|+++|+.|+++
T Consensus 442 ~~l~l~G~~~-~-G~g---v~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 442 LPLTLAGASY-E-GVA---VNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp CSEEECSTTT-S-CCS---HHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEccCC-C-CCc---HHHHHHHHHHHHHHHHhc
Confidence 5789988874 2 222 455677788999998765
No 227
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=21.10 E-value=19 Score=35.53 Aligned_cols=55 Identities=16% Similarity=0.243 Sum_probs=36.3
Q ss_pred ccccccccccCCCCCCCccCCCCceeccCCceEecccCCCCCCCcchHHHHHHHHHHHHHHhhCCC
Q psy10663 488 NHPTGTLRMGPPSDPLAVVGPDFRVNGFSNLRVVGEPVIPVEMVTDSSAVALMLAERCATFIQSPV 553 (572)
Q Consensus 488 ~H~~Gt~rMG~~~d~~~VVD~~~rV~g~~nL~V~D~Sv~P~~~~~NP~lTi~AlA~r~ad~I~~~~ 553 (572)
.+++|...|-++.. -+++ ++-+.+|||++-| -+.+-.....++|+.+|+.|..+.
T Consensus 302 ~~~~g~r~~t~d~~--p~ig---~~~~~~~~~~~~G------~~g~G~~~a~~~g~~la~~i~~~~ 356 (382)
T 1y56_B 302 RTWAGYYAKTPDSN--PAIG---RIEELNDYYIAAG------FSGHGFMMAPAVGEMVAELITKGK 356 (382)
T ss_dssp EEEEEEEEECTTSC--CEEE---EESSSBTEEEEEC------CTTCHHHHHHHHHHHHHHHHHHSS
T ss_pred EEEEeccccCCCCC--cEec---cCCCCCCEEEEEe------cCcchHhhhHHHHHHHHHHHhCCC
Confidence 34555555543221 2332 4456789999854 556778888899999999997653
No 228
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=20.88 E-value=2e+02 Score=26.73 Aligned_cols=58 Identities=21% Similarity=0.240 Sum_probs=44.6
Q ss_pred hcCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcC-CCceeEeeccceeEeccCcchhhHHH
Q psy10663 201 IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRIL 261 (572)
Q Consensus 201 ~~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~-~g~~~~v~A~k~VILaAGai~Tp~LL 261 (572)
.....+.+.+..+.+.++.-. .....++++.+. .+...++.++ .||+|.|..-+..+|
T Consensus 197 ~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~i~~d-~vi~a~G~~pn~~~l 255 (314)
T 4a5l_A 197 VLNHPKIEVIWNSELVELEGD--GDLLNGAKIHNLVSGEYKVVPVA-GLFYAIGHSPNSKFL 255 (314)
T ss_dssp HHTCTTEEEECSEEEEEEEES--SSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGG
T ss_pred hhcccceeeEeeeeeEEEEee--eeccceeEEeecccccceeeccc-cceEecccccChhHh
Confidence 345678999999999998766 456777777643 5667789997 899999987766665
No 229
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=20.73 E-value=20 Score=34.51 Aligned_cols=20 Identities=20% Similarity=0.292 Sum_probs=17.3
Q ss_pred ccccccCCCCCeEEEEcccCC
Q psy10663 2 LTAKLLAQSGCSVLILEAGPD 22 (572)
Q Consensus 2 ~A~rLae~~g~~VLvLEaG~~ 22 (572)
+|..|++. |.+|+|||+.+.
T Consensus 17 ~A~~L~~~-G~~V~vlE~~~~ 36 (336)
T 1yvv_A 17 AAQALTAA-GHQVHLFDKSRG 36 (336)
T ss_dssp HHHHHHHT-TCCEEEECSSSS
T ss_pred HHHHHHHC-CCcEEEEECCCC
Confidence 68899976 999999999864
No 230
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=20.46 E-value=97 Score=30.55 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=30.0
Q ss_pred CeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcc
Q psy10663 206 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 255 (572)
Q Consensus 206 nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai 255 (572)
+.+|+.+++|++|..++ +.+ .|.+ .+|+ +++++ .||.|.|+-
T Consensus 140 ~~~i~~~~~v~~i~~~~--~~v-~v~~--~~g~--~~~ad-~vV~AdG~~ 181 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGK--KKW-TLTF--ENKP--SETAD-LVILANGGM 181 (398)
T ss_dssp TTSEEESCCEEEEEECS--SSE-EEEE--TTSC--CEEES-EEEECSCTT
T ss_pred CCEEEECCEEEEEEECC--CEE-EEEE--CCCc--EEecC-EEEECCCcc
Confidence 36899999999998874 222 2444 3564 57886 899999963
No 231
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=20.08 E-value=31 Score=32.56 Aligned_cols=22 Identities=14% Similarity=0.187 Sum_probs=17.6
Q ss_pred ccccccCCCCCeEEEEcccCCC
Q psy10663 2 LTAKLLAQSGCSVLILEAGPDA 23 (572)
Q Consensus 2 ~A~rLae~~g~~VLvLEaG~~~ 23 (572)
+|..|++.+|.+|+|||+.+..
T Consensus 54 aA~~la~~~G~~V~viEk~~~~ 75 (284)
T 1rp0_A 54 AAYEISKNPNVQVAIIEQSVSP 75 (284)
T ss_dssp HHHHHHTSTTSCEEEEESSSSC
T ss_pred HHHHHHHcCCCeEEEEECCCCC
Confidence 6788886349999999998653
No 232
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=20.04 E-value=49 Score=31.27 Aligned_cols=57 Identities=16% Similarity=0.250 Sum_probs=38.6
Q ss_pred cCCCCeEEeccceEEEEEEeCCCCEEEEEEEEcCCCceeEeeccceeEeccCcchhhHHHHHcCC
Q psy10663 202 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 266 (572)
Q Consensus 202 ~~~~nl~i~~~~~V~~i~~~~~~~~a~gV~~~~~~g~~~~v~A~k~VILaAGai~Tp~LLl~SgI 266 (572)
....++.+++++ |..+.-+ ++++++|++. +|+ ++.+. .+|+++|..-...+|...|+
T Consensus 190 l~~~g~~~~~~~-v~~~~~~--~~~~~~v~~~--~g~--~i~~~-~~vi~~g~~~~~~~~~~~g~ 246 (304)
T 4fk1_A 190 LSNKNIPVITES-IRTLQGE--GGYLKKVEFH--SGL--RIERA-GGFIVPTFFRPNQFIEQLGC 246 (304)
T ss_dssp HHTTTCCEECSC-EEEEESG--GGCCCEEEET--TSC--EECCC-EEEECCEEECSSCHHHHTTC
T ss_pred hhccceeEeeee-EEEeecC--CCeeeeeecc--ccc--eeeec-ceeeeeccccCChhhhhcCe
Confidence 455788888875 5666544 4677788765 555 45665 68888887766667776664
Done!