Query psy10664
Match_columns 75
No_of_seqs 103 out of 1099
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 15:27:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10664.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10664hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vbb_A Seryl-tRNA synthetase, 99.9 8.3E-26 2.8E-30 169.7 5.6 75 1-75 176-250 (522)
2 3lss_A Seryl-tRNA synthetase; 99.9 4.8E-26 1.6E-30 169.8 3.1 75 1-75 182-257 (484)
3 3err_A Fusion protein of micro 99.9 4.5E-25 1.5E-29 165.9 5.1 74 1-75 251-324 (536)
4 3qne_A Seryl-tRNA synthetase, 99.9 2.2E-25 7.6E-30 166.2 3.2 75 1-75 160-234 (485)
5 1wle_A Seryl-tRNA synthetase; 99.9 2.7E-24 9.2E-29 160.8 6.4 74 2-75 195-269 (501)
6 2dq0_A Seryl-tRNA synthetase; 99.9 1.1E-22 3.8E-27 150.3 4.3 75 1-75 168-242 (455)
7 1ses_A Seryl-tRNA synthetase; 99.9 3.3E-22 1.1E-26 146.5 5.7 73 2-75 143-215 (421)
8 2dq3_A Seryl-tRNA synthetase; 99.8 1.2E-21 4.1E-26 143.6 6.6 74 2-75 148-221 (425)
9 3uh0_A Threonyl-tRNA synthetas 99.7 1.5E-17 5E-22 122.8 5.4 71 1-75 43-114 (460)
10 3mf2_A BLL0957 protein; aminoa 99.6 7.1E-17 2.4E-21 116.5 2.5 61 14-75 51-112 (346)
11 1qf6_A THRRS, threonyl-tRNA sy 99.6 3.9E-16 1.3E-20 118.8 3.3 69 2-74 251-319 (642)
12 4hvc_A Bifunctional glutamate/ 99.6 1.5E-15 5.1E-20 113.9 4.9 70 1-75 41-111 (519)
13 1nyr_A Threonyl-tRNA synthetas 99.5 2.3E-15 7.9E-20 114.1 3.0 71 2-75 250-320 (645)
14 1evl_A Threonyl-tRNA synthetas 99.5 5.2E-15 1.8E-19 106.4 4.2 70 1-74 9-78 (401)
15 2cja_A Seryl-tRNA synthetase; 99.5 7.1E-15 2.4E-19 110.4 4.8 64 12-75 217-281 (522)
16 3ial_A Prolyl-tRNA synthetase; 99.5 7.4E-15 2.5E-19 110.2 2.1 71 1-75 34-105 (518)
17 1nj1_A PROR, proline-tRNA synt 99.4 1.9E-14 6.6E-19 107.0 2.1 70 1-75 50-120 (501)
18 2j3l_A Prolyl-tRNA synthetase; 99.4 1.7E-13 5.8E-18 102.2 3.5 62 14-75 35-96 (572)
19 1ati_A Glycyl-tRNA synthetase; 99.3 3.5E-13 1.2E-17 100.3 2.8 59 16-74 29-89 (505)
20 3a32_A Probable threonyl-tRNA 99.3 2.6E-12 8.7E-17 94.5 5.3 62 14-75 37-98 (471)
21 1nj8_A Proline-tRNA synthetase 99.3 3.3E-12 1.1E-16 94.0 5.5 71 1-75 17-88 (459)
22 1hc7_A Prolyl-tRNA synthetase; 99.2 2.9E-12 1E-16 94.8 3.0 69 2-75 25-94 (477)
23 2i4l_A Proline-tRNA ligase; al 99.2 5.9E-12 2E-16 92.3 3.8 62 14-75 55-116 (458)
24 1qe0_A Histidyl-tRNA synthetas 99.1 3.6E-11 1.2E-15 86.2 3.4 62 14-75 4-67 (420)
25 4e51_A Histidine--tRNA ligase; 99.0 1.5E-10 5.2E-15 85.2 3.6 62 14-75 34-97 (467)
26 2zt5_A Glycyl-tRNA synthetase; 99.0 2E-10 6.9E-15 88.4 3.2 59 16-74 91-150 (693)
27 1h4v_B Histidyl-tRNA synthetas 98.8 5.1E-09 1.8E-13 75.1 4.9 62 14-75 5-68 (421)
28 1htt_A Histidyl-tRNA synthetas 98.7 5.4E-09 1.9E-13 75.0 3.4 62 14-75 6-69 (423)
29 1z7m_A ATP phosphoribosyltrans 98.7 2.2E-08 7.5E-13 71.3 5.4 61 14-74 24-86 (344)
30 1wu7_A Histidyl-tRNA synthetas 98.7 2.3E-08 7.8E-13 72.3 4.8 61 13-75 7-68 (434)
31 3rac_A Histidine-tRNA ligase; 98.5 1.7E-07 5.7E-12 67.5 5.9 60 14-75 25-85 (373)
32 3od1_A ATP phosphoribosyltrans 98.4 2.2E-07 7.6E-12 67.4 4.3 60 14-75 12-71 (400)
33 3ikl_A DNA polymerase subunit 98.2 3.5E-07 1.2E-11 67.9 1.4 52 15-69 93-146 (459)
34 3lc0_A Histidyl-tRNA synthetas 98.2 5.6E-07 1.9E-11 66.2 1.8 59 14-74 31-90 (456)
35 3net_A Histidyl-tRNA synthetas 97.9 9.5E-06 3.3E-10 59.5 4.9 58 15-74 15-72 (465)
36 4g84_A Histidine--tRNA ligase, 97.9 2.1E-05 7.1E-10 56.8 5.3 58 15-74 17-74 (464)
37 1g5h_A Mitochondrial DNA polym 97.8 1.3E-06 4.6E-11 64.3 -2.3 55 17-71 52-114 (454)
38 3dsq_A Pyrrolysyl-tRNA synthet 97.7 3.8E-05 1.3E-09 53.6 4.6 38 29-66 73-110 (288)
39 4g85_A Histidine-tRNA ligase, 97.7 4.1E-05 1.4E-09 56.5 4.5 57 16-74 71-127 (517)
40 3qtc_A Pyrrolysyl-tRNA synthet 96.4 0.0047 1.6E-07 42.5 4.6 38 29-66 79-116 (290)
41 1usy_A ATP phosphoribosyltrans 94.6 0.007 2.4E-07 41.5 0.3 31 31-61 5-37 (275)
42 3a5y_A GENX, putative lysyl-tR 92.2 0.13 4.6E-06 36.5 3.7 35 23-57 33-67 (345)
43 2xgt_A Asparaginyl-tRNA synthe 91.1 0.18 6.3E-06 36.7 3.5 35 24-58 130-164 (435)
44 3m4p_A Ehasnrs, asparaginyl-tR 91.1 0.2 6.8E-06 36.9 3.7 35 24-58 154-188 (456)
45 1nnh_A Asparaginyl-tRNA synthe 90.7 0.29 1E-05 33.8 4.1 34 23-56 12-45 (294)
46 1eov_A ASPRS, aspartyl-tRNA sy 89.6 0.34 1.2E-05 35.9 3.9 34 24-57 176-209 (487)
47 1c0a_A Aspartyl tRNA synthetas 89.5 0.29 9.8E-06 37.1 3.5 33 24-56 136-168 (585)
48 3nem_A Aspartyl-tRNA synthetas 89.3 0.35 1.2E-05 35.4 3.7 34 24-57 135-168 (438)
49 1l0w_A Aspartyl-tRNA synthetas 89.1 0.32 1.1E-05 36.8 3.5 32 25-56 143-174 (580)
50 1e1o_A Lysyl-tRNA synthetase, 88.9 0.4 1.4E-05 35.7 3.8 33 24-56 181-213 (504)
51 3a74_A Lysyl-tRNA synthetase; 88.9 0.42 1.4E-05 35.5 3.9 33 24-56 172-204 (493)
52 3i7f_A Aspartyl-tRNA synthetas 88.8 0.42 1.4E-05 36.2 3.9 34 24-57 242-275 (548)
53 1n9w_A Aspartyl-tRNA synthetas 88.3 0.49 1.7E-05 34.4 3.9 33 24-56 123-155 (422)
54 3bju_A Lysyl-tRNA synthetase; 88.2 0.45 1.6E-05 35.6 3.8 33 24-56 174-206 (521)
55 4ex5_A Lysine--tRNA ligase; st 87.8 0.5 1.7E-05 35.6 3.8 33 24-56 202-234 (529)
56 1wyd_A Hypothetical aspartyl-t 87.6 0.58 2E-05 34.1 3.9 33 24-56 132-164 (429)
57 1x54_A Asparaginyl-tRNA synthe 86.6 0.71 2.4E-05 33.6 3.9 33 24-56 133-165 (434)
58 4f54_A Uncharacterized protein 82.5 1.8 6E-05 28.7 4.1 49 6-54 22-86 (197)
59 4ah6_A Aspartate--tRNA ligase, 81.9 1.4 4.6E-05 33.9 3.8 32 25-56 147-179 (617)
60 3ica_A Phenylalanyl-tRNA synth 71.2 3.5 0.00012 26.8 3.1 34 30-63 7-40 (213)
61 3ig2_A Phenylalanyl-tRNA synth 70.7 3.7 0.00012 26.7 3.1 34 30-63 7-40 (213)
62 2lc0_A Putative uncharacterize 70.1 2.9 0.0001 25.9 2.3 33 21-53 74-106 (132)
63 3fhk_A UPF0403 protein YPHP; d 65.2 5.8 0.0002 25.3 3.0 29 30-58 13-41 (147)
64 2j13_A Polysaccharide deacetyl 62.9 2.8 9.6E-05 27.8 1.3 41 15-56 203-244 (247)
65 2rhq_A Phenylalanyl-tRNA synth 62.1 7.8 0.00027 26.5 3.5 28 29-56 55-82 (294)
66 2y8u_A Chitin deacetylase; hyd 55.8 12 0.00042 24.4 3.5 42 14-55 180-222 (230)
67 1ny1_A Probable polysaccharide 55.0 3.6 0.00012 27.1 0.7 43 15-58 191-234 (240)
68 2iw0_A Chitin deacetylase; hyd 52.9 9.4 0.00032 25.3 2.6 41 15-55 198-239 (254)
69 3l4g_B Phenylalanyl-tRNA synth 51.9 14 0.00049 27.7 3.7 29 30-58 394-422 (589)
70 1sx5_A Type II restriction enz 51.4 19 0.00066 24.7 3.9 25 26-50 41-65 (244)
71 3i9s_A Integron cassette prote 46.9 24 0.00082 20.5 3.5 45 29-73 121-169 (183)
72 2du3_A O-phosphoseryl-tRNA syn 46.1 16 0.00054 27.6 3.1 30 29-58 49-78 (534)
73 3e0k_A Amino-acid acetyltransf 45.2 39 0.0013 18.9 5.2 41 29-69 86-126 (150)
74 1b7y_A Phers, protein (phenyla 44.5 20 0.00069 25.3 3.3 29 29-57 103-131 (350)
75 3gy9_A GCN5-related N-acetyltr 40.5 46 0.0016 18.4 4.0 39 30-69 95-133 (150)
76 2ozh_A Hypothetical protein XC 38.1 52 0.0018 18.2 4.0 40 28-67 86-125 (142)
77 2w3z_A Putative deacetylase; P 37.9 32 0.0011 23.6 3.4 34 15-49 273-309 (311)
78 2egv_A UPF0088 protein AQ_165; 36.9 26 0.00088 23.1 2.8 37 19-60 182-219 (229)
79 1jg5_A GTP cyclohydrolase I fe 36.6 23 0.00078 20.5 2.1 16 35-50 54-69 (83)
80 1wn4_A Vontr protein; helix, p 35.1 35 0.0012 15.7 2.2 13 26-38 9-21 (28)
81 2cc0_A Acetyl-xylan esterase; 35.0 29 0.00099 21.6 2.7 39 16-55 148-187 (195)
82 1vhy_A Hypothetical protein HI 33.6 32 0.0011 23.1 2.8 37 18-59 193-230 (257)
83 2kup_A Fibroblast growth facto 33.5 17 0.00058 23.1 1.3 61 3-67 70-132 (146)
84 4ag7_A Glucosamine-6-phosphate 32.4 67 0.0023 17.8 4.0 37 30-66 119-156 (165)
85 1s3z_A Aminoglycoside 6'-N-ace 31.9 71 0.0024 17.9 4.2 38 29-66 113-154 (165)
86 4fd4_A Arylalkylamine N-acetyl 31.0 60 0.0021 19.1 3.6 38 29-66 144-183 (217)
87 1xqi_A Nucleoside diphosphate 30.5 25 0.00086 23.0 1.8 36 14-51 15-50 (195)
88 3d8p_A Acetyltransferase of GN 30.0 73 0.0025 17.5 4.3 40 28-67 95-138 (163)
89 1qsm_A HPA2 histone acetyltran 28.9 62 0.0021 17.5 3.2 38 30-67 102-143 (152)
90 2rhq_B Phenylalanyl-tRNA synth 28.9 41 0.0014 26.3 3.0 31 29-59 495-525 (795)
91 2yma_A YOS9P, protein OS-9 hom 28.3 17 0.00059 23.4 0.7 13 13-25 18-30 (161)
92 3i3g_A N-acetyltransferase; ma 28.1 82 0.0028 17.5 4.2 39 29-67 114-153 (161)
93 4evy_A Aminoglycoside N(6')-ac 28.1 87 0.003 17.7 4.3 38 30-67 114-155 (166)
94 3or1_C Sulfite reductase GAMA; 27.9 33 0.0011 20.4 1.9 31 28-64 45-75 (105)
95 2dxq_A AGR_C_4057P, acetyltran 27.6 87 0.003 17.6 3.8 38 28-65 98-139 (150)
96 1v6z_A Hypothetical protein TT 27.3 30 0.001 22.8 1.8 37 19-60 178-215 (228)
97 3m4i_A DNA gyrase subunit B; G 27.3 87 0.003 21.3 4.1 33 23-55 102-137 (242)
98 2c71_A Glycoside hydrolase, fa 27.0 37 0.0013 21.7 2.2 41 16-57 148-192 (216)
99 3f8k_A Protein acetyltransfera 26.9 82 0.0028 17.4 3.5 38 30-67 92-133 (160)
100 1n71_A AAC(6')-II; aminoglycos 26.6 1E+02 0.0034 17.9 4.2 23 28-50 87-109 (180)
101 3gon_A Phosphomevalonate kinas 26.2 86 0.003 20.5 4.0 36 9-49 286-325 (335)
102 2r7h_A Putative D-alanine N-ac 25.4 97 0.0033 17.4 4.3 38 29-66 112-155 (177)
103 1k44_A Nucleoside diphosphate 25.1 47 0.0016 20.3 2.3 34 17-52 5-38 (136)
104 1ob8_A Holliday-junction resol 25.0 61 0.0021 19.9 2.8 19 33-51 10-28 (135)
105 3efa_A Putative acetyltransfer 24.7 96 0.0033 17.1 4.0 38 29-66 89-127 (147)
106 2atr_A Acetyltransferase, GNAT 23.7 75 0.0026 17.0 2.9 40 29-68 84-124 (138)
107 1vhk_A Hypothetical protein YQ 23.6 35 0.0012 23.0 1.6 33 21-58 205-238 (268)
108 2hv2_A Hypothetical protein; P 23.6 95 0.0033 21.0 3.9 41 28-70 95-136 (400)
109 3pco_A Phenylalanyl-tRNA synth 23.6 59 0.002 22.8 2.8 26 30-55 110-135 (327)
110 2du7_A O-phosphoseryl-tRNA syn 23.5 69 0.0024 24.2 3.3 35 30-64 60-95 (549)
111 1b7y_B Phers, protein (phenyla 23.5 56 0.0019 25.5 2.9 32 29-60 491-522 (785)
112 2oh1_A Acetyltransferase, GNAT 23.5 1.1E+02 0.0037 17.2 4.2 38 29-66 121-162 (179)
113 2i00_A Acetyltransferase, GNAT 23.1 78 0.0027 21.5 3.4 39 28-68 108-147 (406)
114 3dr6_A YNCA; acetyltransferase 22.9 1E+02 0.0036 16.9 4.2 39 28-66 99-141 (174)
115 3lod_A Putative acyl-COA N-acy 22.8 1.1E+02 0.0036 16.9 4.1 38 29-66 92-133 (162)
116 4e8b_A Ribosomal RNA small sub 22.8 65 0.0022 21.4 2.8 36 19-59 191-227 (251)
117 2gan_A 182AA long hypothetical 22.6 1.2E+02 0.0042 17.6 4.4 39 28-66 123-164 (190)
118 2vez_A Putative glucosamine 6- 22.5 1.2E+02 0.0042 17.6 5.4 41 29-69 143-184 (190)
119 1hh1_A Holliday junction resol 22.5 73 0.0025 19.7 2.8 20 33-52 12-31 (143)
120 3k9f_C DNA topoisomerase 4 sub 22.4 95 0.0032 21.5 3.6 34 23-56 130-166 (268)
121 2eo0_A Hypothetical protein ST 22.4 70 0.0024 19.8 2.7 19 33-51 15-33 (147)
122 12as_A Asparagine synthetase; 22.1 43 0.0015 23.9 1.8 30 34-67 17-47 (330)
123 2fe7_A Probable N-acetyltransf 21.5 1.1E+02 0.0039 16.7 4.2 40 28-67 105-148 (166)
124 1y9k_A IAA acetyltransferase; 21.3 1.2E+02 0.0041 16.9 4.1 40 28-67 78-121 (157)
125 4h89_A GCN5-related N-acetyltr 21.2 1.3E+02 0.0045 17.4 4.1 38 28-65 105-147 (173)
126 1yvk_A Hypothetical protein BS 21.1 1.3E+02 0.0044 17.3 4.1 39 28-66 80-122 (163)
127 1xmt_A Putative acetyltransfer 20.7 1.2E+02 0.0042 16.9 3.6 36 28-63 53-88 (103)
128 2c1i_A Peptidoglycan glcnac de 20.6 62 0.0021 23.4 2.5 41 16-57 378-419 (431)
129 3fov_A UPF0102 protein RPA0323 20.5 76 0.0026 19.5 2.6 17 33-49 27-43 (134)
130 2q7b_A Acetyltransferase, GNAT 20.5 1.4E+02 0.0046 17.3 4.0 37 30-66 116-156 (181)
131 2fia_A Acetyltransferase; stru 20.5 1.2E+02 0.004 16.5 3.8 39 28-66 92-134 (162)
132 1wkj_A Nucleoside diphosphate 20.4 53 0.0018 20.0 1.8 33 18-52 5-37 (137)
133 1ghe_A Acetyltransferase; acyl 20.2 1.2E+02 0.0043 16.7 4.2 38 29-66 108-148 (177)
134 2hur_A NDK, nucleoside diphosp 20.1 67 0.0023 19.7 2.3 34 17-52 5-38 (142)
135 2odr_B Phosphoseryl-tRNA synth 20.1 92 0.0031 24.2 3.4 34 31-64 69-103 (648)
136 1u6m_A Acetyltransferase, GNAT 20.0 1.1E+02 0.0037 18.1 3.3 38 28-65 129-170 (199)
No 1
>3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens}
Probab=99.92 E-value=8.3e-26 Score=169.68 Aligned_cols=75 Identities=68% Similarity=1.125 Sum_probs=72.0
Q ss_pred CCCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 1 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 1 ~l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
++|++||++|+|++|+|||+|+|.||+|++||++|+++++.++||++|.||+|++.++|++||||++|+|+||++
T Consensus 176 ~l~l~dfe~~~kvsGsgfy~l~p~GarL~raL~~f~~d~~~~~Gy~EV~~P~lv~~el~~~sG~l~~f~eemy~v 250 (522)
T 3vbb_A 176 MVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKV 250 (522)
T ss_dssp HTTCEECHHHHHHHSTTCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHSCCC-CCSCCCEE
T ss_pred hcCcEecccccccCCcceEEEcCHHHHHHHHHHHHHHHHHHHcCCEEEECCcccchHHHhhcCCcccCcccceEe
Confidence 479999999999999999999999999999999999999999999999999999999999999999999999974
No 2
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=99.92 E-value=4.8e-26 Score=169.78 Aligned_cols=75 Identities=52% Similarity=0.914 Sum_probs=72.9
Q ss_pred CCCcccccccc-hhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 1 MIDGVDSEAGA-IVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 1 ~l~~~d~~~~~-k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
+||++||++++ |++|+|||+|+|.||+|++||++|+++++.++||++|.||+|++.++|++||||++|+|+||++
T Consensus 182 ~l~l~df~~~a~k~sGsgf~~~~p~GarL~~aL~~f~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~mf~v 257 (484)
T 3lss_A 182 RLGMMDTSKAVTSMAGGRSYVLKGGLVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQV 257 (484)
T ss_dssp HTTCEECSHHHHHHHCTTCCEEEHHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHHHTCCEE
T ss_pred hCCceeccccccccCCceEEEECCHHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHHhcCCcccccccceEe
Confidence 47999999999 9999999999999999999999999999999999999999999999999999999999999974
No 3
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A
Probab=99.91 E-value=4.5e-25 Score=165.88 Aligned_cols=74 Identities=18% Similarity=0.418 Sum_probs=71.7
Q ss_pred CCCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 1 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 1 ~l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
+||++| ++|+|++|+|||+|+|.||+|++||++|+++++.++||++|.||+|++.++|++|||||+|+|+||++
T Consensus 251 ~l~l~d-~~~~k~~G~g~~~~~p~Ga~l~~aL~~~~~~~~~~~Gy~ev~~P~lv~~~l~~~sG~~~~f~e~mf~~ 324 (536)
T 3err_A 251 KNGWWE-PRISQVSGSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAI 324 (536)
T ss_dssp HHTCBC-TTHHHHHCSSCCCEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGCCEE
T ss_pred HcCCcc-cccccCCCCceeEEcCHHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHHhcCCcccChhhceEe
Confidence 378999 99999999999999999999999999999999999999999999999999999999999999999974
No 4
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=99.91 E-value=2.2e-25 Score=166.24 Aligned_cols=75 Identities=52% Similarity=0.851 Sum_probs=72.8
Q ss_pred CCCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 1 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 1 ~l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
++|++||++|+|++|+|||+|+|.||+|++||++|++|++.++||++|.||+|++.++|++||||++|+|+||++
T Consensus 160 ~l~l~df~~~~k~sGsg~~~l~p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~l~~f~eemf~v 234 (485)
T 3qne_A 160 RLDGYDPERGVRIVGHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKV 234 (485)
T ss_dssp HTTCEEHHHHHHHHCTTCCEECTHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHTTTCCEE
T ss_pred hcCCcccccccccccceeEEEecHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccccceEEE
Confidence 379999999999999999999999999999999999999999999999999999999999999999999999974
No 5
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=99.90 E-value=2.7e-24 Score=160.76 Aligned_cols=74 Identities=30% Similarity=0.594 Sum_probs=72.3
Q ss_pred CCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCcc-ccccC
Q psy10664 2 IDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDE-ELYKM 75 (75)
Q Consensus 2 l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e-~~y~i 75 (75)
+|++||+++++++|+|||+|+|.||+|++||++|+++++.++||++|.||+|++.++|++||||++|.+ +||++
T Consensus 195 lgl~d~~~~~k~~G~g~~~l~p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~emf~v 269 (501)
T 1wle_A 195 LDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNI 269 (501)
T ss_dssp HTCEECTTCTTTTCTTCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHTCCSSSSSCSSCBB
T ss_pred cCceecccccccccCceEEEcChHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHHhhcCCCccCccccEEE
Confidence 689999999999999999999999999999999999999999999999999999999999999999998 99975
No 6
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=99.86 E-value=1.1e-22 Score=150.34 Aligned_cols=75 Identities=33% Similarity=0.690 Sum_probs=72.7
Q ss_pred CCCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 1 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 1 ~l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
++|++||++++|++|+|||+|+|.|++|+++|++|+++.+.++||++|.||.|++.++|++|||+++|+++||++
T Consensus 168 ~l~l~d~~~~~k~~g~G~~~~~p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~ 242 (455)
T 2dq0_A 168 ILGGADFARAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTSFEDFEDVIYKV 242 (455)
T ss_dssp HTTCEESHHHHHHTCTTCCEEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHTTSCTTHHHHTCCBB
T ss_pred cCCcEEecccccccCCCeEEECCHHHHHHHHHHHHHHHHHHHcCCEEEeCCcccCHHHHHhcCCCCCChHhhCee
Confidence 379999999999999999999999999999999999999999999999999999999999999999999999975
No 7
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=99.85 E-value=3.3e-22 Score=146.52 Aligned_cols=73 Identities=18% Similarity=0.430 Sum_probs=71.3
Q ss_pred CCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 2 IDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 2 l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
+|++| ++++|++|+|||+|+|.|++|+++|++|+++.+.++||++|.||.|++.++|++|||+++|+++||++
T Consensus 143 l~l~d-~~~~~~~g~G~~~~~p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~ 215 (421)
T 1ses_A 143 NGWWE-PRISQVSGSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAI 215 (421)
T ss_dssp HTCBC-TTHHHHHCSSCCCEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBB
T ss_pred cCccc-cccccccCCCeEEECcHHHHHHHHHHHHHHHHHHHcCCEEEeCCceecHHHHHhcCCCCcCchhcEEE
Confidence 68999 99999999999999999999999999999999999999999999999999999999999999999975
No 8
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=99.85 E-value=1.2e-21 Score=143.62 Aligned_cols=74 Identities=28% Similarity=0.527 Sum_probs=72.5
Q ss_pred CCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 2 IDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 2 l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
+|++||++++|++|+|+|+|+|.|+.|+++|++|+++.+.++||++|.||.|++.++|++|||+++|+++||++
T Consensus 148 l~l~d~~~~~~~~g~G~~~~~p~ga~l~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~ 221 (425)
T 2dq3_A 148 LGILDFKRGAKLSGSRFTVIAGWGARLERALINFMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKC 221 (425)
T ss_dssp TTCEEHHHHHHHHCSSCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHSCTTTTGGGSCBC
T ss_pred CCeEEecccccccCCCceEECcHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCCCcChhhheEe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999975
No 9
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A*
Probab=99.69 E-value=1.5e-17 Score=122.78 Aligned_cols=71 Identities=11% Similarity=0.280 Sum_probs=67.3
Q ss_pred CCCcccccccchhccCcceeecchHHHHHHHHHHHHHHHH-HhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 1 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKW-IEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 1 ~l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~-~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
+|+++||++ +|+|+++|+|.|+.|+++|++|+++.+ .++||++|.||.|++.++|++|||+++|+++||++
T Consensus 43 ~l~l~~~~~----~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~emy~~ 114 (460)
T 3uh0_A 43 RQDLFMTDP----LSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMFKV 114 (460)
T ss_dssp HHTCEECCT----TSTTCCEECHHHHHHHHHHHHHHHHHHHHTSCCEECCCCSEEEHHHHHHHTCTTTSGGGSCEE
T ss_pred hCCCceecc----CCCCcEEECccHHHHHHHHHHHHHHHHHHhcCCEEEECCeeccHHHHHhcCCccccccceEEE
Confidence 368999998 399999999999999999999999999 99999999999999999999999999999999963
No 10
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A*
Probab=99.63 E-value=7.1e-17 Score=116.50 Aligned_cols=61 Identities=20% Similarity=0.146 Sum_probs=58.5
Q ss_pred cc-CcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 14 AG-GRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 14 ~G-~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
+| +|||.+.|.++.|+++|++|+++ +.++||++|.+|.|+++++|++||||++|.|+||++
T Consensus 51 ~g~~g~y~~~g~~a~L~~aLe~~~~~-~~~~Gy~ev~~P~lv~~~~~e~SGhl~~F~e~mf~v 112 (346)
T 3mf2_A 51 MGSDGVYARTALYESIVERLAALITS-HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCV 112 (346)
T ss_dssp EEETTEEEEEHHHHHHHHHHHHHHHH-TCCTTCEEEECCSEEEHHHHHHTTHHHHCGGGCEEE
T ss_pred cCCCceEEecchHHHHHHHHHHHHHh-hHhcCCeEEECCCccCHHHHHhcCCcccChhhccee
Confidence 45 99999999999999999999999 999999999999999999999999999999999973
No 11
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=99.59 E-value=3.9e-16 Score=118.78 Aligned_cols=69 Identities=14% Similarity=0.251 Sum_probs=66.1
Q ss_pred CCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCcccccc
Q psy10664 2 IDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 74 (75)
Q Consensus 2 l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~ 74 (75)
|++++++++ |+|+++|+|.|+.+.++|++|+++.+.++||++|.||.|.+.++|++||||++|.++||+
T Consensus 251 l~l~~~~~~----~~G~~~~lP~g~~l~~~l~~~~r~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~~my~ 319 (642)
T 1qf6_A 251 LDLYHMQEE----APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 319 (642)
T ss_dssp TTCEECCTT----STTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEE
T ss_pred cCccccccC----CCCcEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCcCccHHHHhhcCcccccccccee
Confidence 688999873 999999999999999999999999999999999999999999999999999999999995
No 12
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens}
Probab=99.57 E-value=1.5e-15 Score=113.89 Aligned_cols=70 Identities=14% Similarity=0.214 Sum_probs=64.5
Q ss_pred CCCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHH-cCCCCCCccccccC
Q psy10664 1 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE-VAQLAQFDEELYKM 75 (75)
Q Consensus 1 ~l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~-sG~~~~~~e~~y~i 75 (75)
++|++|+ .+++|+++|+|.|+.|+++|++|+++.+.++||++|.||.|++.++|++ |||++.|+++||.+
T Consensus 41 ~~~lid~-----~~~~G~~~~lP~G~~i~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~k~sGh~~~f~~emy~~ 111 (519)
T 4hvc_A 41 KSEMIEY-----HDISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWV 111 (519)
T ss_dssp HTTCEEE-----CSSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCCSCGGGGGGCEEE
T ss_pred HCCCeEe-----cCCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHhcccCCcccccccceEE
Confidence 3678887 2678899999999999999999999999999999999999999999996 99999999999853
No 13
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A*
Probab=99.53 E-value=2.3e-15 Score=114.10 Aligned_cols=71 Identities=13% Similarity=0.331 Sum_probs=67.6
Q ss_pred CCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 2 IDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 2 l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
|++++++. .+|+|++.|+|.|+.+.++|++++++.+.++||++|.||.|.+.++|++||||+.|.++||++
T Consensus 250 l~l~~~~~---~~~~G~~~~lP~g~~~~~~l~~~ir~~~~~~Gy~eV~tP~l~~~~l~~~sG~~d~~~~~mf~~ 320 (645)
T 1nyr_A 250 LELFTNSQ---LVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPP 320 (645)
T ss_dssp TTCEEEET---TTEEEEEEECHHHHHHHHHHHHHHHHHHHHTTEEECBCCSEEETHHHHHHTHHHHCTTSSCCC
T ss_pred cceEEecc---cCCCceeEECCCHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHhhCCCccccccCccee
Confidence 68888887 569999999999999999999999999999999999999999999999999999999999974
No 14
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=99.52 E-value=5.2e-15 Score=106.39 Aligned_cols=70 Identities=14% Similarity=0.243 Sum_probs=66.5
Q ss_pred CCCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCcccccc
Q psy10664 1 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 74 (75)
Q Consensus 1 ~l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~ 74 (75)
++|+++++++ ++|++.|.|.|+.+.++|++++++.+.++||++|.||.+.+.++|++|||++.|.++||+
T Consensus 9 ~~~l~~~~~~----~~G~~d~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~em~~ 78 (401)
T 1evl_A 9 QLDLYHMQEE----APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT 78 (401)
T ss_dssp HTTCEECCTT----STTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSGGGCCE
T ss_pred hCCceEecCC----CCcceEECchHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHHhcCcHhhhchhhEe
Confidence 3789999883 899999999999999999999999999999999999999999999999999999999995
No 15
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A
Probab=99.52 E-value=7.1e-15 Score=110.41 Aligned_cols=64 Identities=13% Similarity=0.118 Sum_probs=60.5
Q ss_pred hhccCcceeecchHHHHHHHHHHHHHHH-HHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 12 IVAGGRGYFLKGPAVCLQVGLVQYALSK-WIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 12 k~~G~~~~~l~~~ga~L~~aL~~f~~~~-~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
+.+|+|+|+|.|.|+.|+++|++|+++. +.+.||++|.+|.|++.++|++|||+++|.++||++
T Consensus 217 ~~~~~G~y~~~P~G~~L~~~L~~~~~~e~~~~~G~~EV~tP~L~~~el~~~SGh~~~F~demy~v 281 (522)
T 2cja_A 217 RGSSRGQWIHGPQSARIFRTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKSGHAKGVYPEIYYV 281 (522)
T ss_dssp ECSSTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECBCCSEEEHHHHHHHTGGGTCGGGCCEE
T ss_pred eeCCCCeEEECchHHHHHHHHHHHHHHHHHHHcCCEEEECCCcccHHHHhhcCCcCccccceeee
Confidence 3589999999999999999999999985 889999999999999999999999999999999964
No 16
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803}
Probab=99.48 E-value=7.4e-15 Score=110.18 Aligned_cols=71 Identities=10% Similarity=0.204 Sum_probs=65.3
Q ss_pred CCCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHH-HcCCCCCCccccccC
Q psy10664 1 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQ-EVAQLAQFDEELYKM 75 (75)
Q Consensus 1 ~l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~-~sG~~~~~~e~~y~i 75 (75)
+.|++|+ |. +++|+++|+|.|+.+.++|++|+++.+.+.||++|.||.|++.++|+ .|||++.|+++||.+
T Consensus 34 ~aglid~-r~---~~~G~~~~lP~G~~i~~~L~~~~~~~~~~~Gy~eV~tP~l~~~el~~k~sgh~~~f~~emy~v 105 (518)
T 3ial_A 34 AAELVDR-RY---PVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFWV 105 (518)
T ss_dssp HTTCEET-TS---SSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTSSHHHHHHHGGGCEEE
T ss_pred HCCCccc-CC---CCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEEcccccCHHHHHhhcCCcccccccEEEE
Confidence 3688888 42 68999999999999999999999999999999999999999999996 699999999999964
No 17
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A*
Probab=99.44 E-value=1.9e-14 Score=106.98 Aligned_cols=70 Identities=7% Similarity=0.088 Sum_probs=64.6
Q ss_pred CCCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHH-cCCCCCCccccccC
Q psy10664 1 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE-VAQLAQFDEELYKM 75 (75)
Q Consensus 1 ~l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~-sG~~~~~~e~~y~i 75 (75)
++|++|++++ .+|+++|+|.|+.|+++|++++++.+.+ ||++|.||.+++.++|++ |||++.|+++||++
T Consensus 50 ~~glid~~~~----~~G~~~~~P~g~~l~~~i~~~~~~~~~~-G~~ei~tP~l~~~~l~~~~sG~~~~f~~emy~~ 120 (501)
T 1nj1_A 50 EAEIIDQRYP----VKGMHVWMPHGFMIRKNTLKILRRILDR-DHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWV 120 (501)
T ss_dssp HTTCEECCCS----STTCCEECHHHHHHHHHHHHHHHHHHTT-TCEECCCCSEEEHHHHTTSHHHHHHTTTTCCEE
T ss_pred HCCCccccCC----CCceEEECccHHHHHHHHHHHHHHHHHc-CCEEEecCcEecHHHHhcccCCcccCCcceEEE
Confidence 3688998664 4899999999999999999999999989 999999999999999998 99999999999974
No 18
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A*
Probab=99.38 E-value=1.7e-13 Score=102.21 Aligned_cols=62 Identities=13% Similarity=0.172 Sum_probs=59.8
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
+++|++.|+|.|+.+.++|++++++.+.++||++|.||.+.+.++|+.|||++.|+++||++
T Consensus 35 ~~~G~~~~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~~m~~~ 96 (572)
T 2j3l_A 35 VAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRL 96 (572)
T ss_dssp EETTEEEECHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEETHHHHHHSHHHHSCTTSCEE
T ss_pred cCCCeeeeCCHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCccccchheEEE
Confidence 58999999999999999999999999999999999999999999999999999999999973
No 19
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A*
Probab=99.33 E-value=3.5e-13 Score=100.29 Aligned_cols=59 Identities=15% Similarity=0.101 Sum_probs=57.5
Q ss_pred CcceeecchHHHHHHHHHHHHHHHHH--hCCCeeeccCccchHHHHHHcCCCCCCcccccc
Q psy10664 16 GRGYFLKGPAVCLQVGLVQYALSKWI--EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 74 (75)
Q Consensus 16 ~~~~~l~~~ga~L~~aL~~f~~~~~~--~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~ 74 (75)
+|+|.|.|.|+.|.+.|++++++.+. +.||.+|.||.|.+.++|+.||||++|.|+||+
T Consensus 29 ~G~~d~~P~G~~l~~~l~~~~r~~~~~~~~g~~ev~tP~l~~~~l~~~SGh~~~f~d~m~~ 89 (505)
T 1ati_A 29 QGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVD 89 (505)
T ss_dssp TTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHHHHCEEEEEE
T ss_pred CCcceeCccHHHHHHHHHHHHHHHHHHhhCCcEEEEccccCCHHHHHhcCChhhcCcccee
Confidence 89999999999999999999999998 899999999999999999999999999999986
No 20
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A
Probab=99.29 E-value=2.6e-12 Score=94.47 Aligned_cols=62 Identities=13% Similarity=0.228 Sum_probs=60.1
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
+++|++.|+|.|+.+.++|++++++.+.++||++|.||.+.+.++|++|||++.|.++||++
T Consensus 37 ~~~G~~d~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sg~~~~~~~emy~~ 98 (471)
T 3a32_A 37 TGAGVPLFSLGGGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNMYLF 98 (471)
T ss_dssp HCTTCCCBCTTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHTCCCTTGGGGSEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHHHHHHHHcCCEEEECCeeeehHHhhhccCccccccceEEE
Confidence 79999999999999999999999999999999999999999999999999999999999973
No 21
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1
Probab=99.28 E-value=3.3e-12 Score=93.97 Aligned_cols=71 Identities=10% Similarity=0.077 Sum_probs=64.4
Q ss_pred CCCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHH-cCCCCCCccccccC
Q psy10664 1 MIDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE-VAQLAQFDEELYKM 75 (75)
Q Consensus 1 ~l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~-sG~~~~~~e~~y~i 75 (75)
+.|++|++.+ .+|++.|+|.|+.+.+.|++++++.+.+.||++|.||.+.+.++|++ +||++.|.++||++
T Consensus 17 ~~~li~~~~~----~~G~~d~lP~g~~l~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~G~~~~~~~emy~~ 88 (459)
T 1nj8_A 17 KAEIYDVRYP----IKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWV 88 (459)
T ss_dssp HTSSCBCCST----TSSCCBBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHCSSSGGGGGGCEEE
T ss_pred hCCCccccCC----CCceEEECChHHHHHHHHHHHHHHHHHHcCCEEeeCCcccCHHHHhhhcCcccccchhhEEE
Confidence 3578888653 48899999999999999999999999999999999999999999985 99999999999963
No 22
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A
Probab=99.23 E-value=2.9e-12 Score=94.79 Aligned_cols=69 Identities=14% Similarity=0.183 Sum_probs=55.5
Q ss_pred CCcccccccchhccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHH-cCCCCCCccccccC
Q psy10664 2 IDGVDSEAGAIVAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE-VAQLAQFDEELYKM 75 (75)
Q Consensus 2 l~~~d~~~~~k~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~-sG~~~~~~e~~y~i 75 (75)
.|++++. +.+|++.|+|.|+.+.+.|++++++.+.+.||++|.||.+.+.++|++ |||++.|.++||.+
T Consensus 25 ~~li~~~-----~~~G~~d~lP~g~~l~~~I~~~~r~~~~~~G~~ei~tP~l~~~el~~~~sgh~d~f~~emy~~ 94 (477)
T 1hc7_A 25 AELADYG-----PVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVV 94 (477)
T ss_dssp TTSEEEC-----SSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---------CCTTCEEE
T ss_pred CCCeeec-----CCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHhhcCCcccccccceEEE
Confidence 4667664 368899999999999999999999999999999999999999999988 99999999999964
No 23
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A*
Probab=99.21 E-value=5.9e-12 Score=92.25 Aligned_cols=62 Identities=11% Similarity=0.113 Sum_probs=59.5
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
+++|+|.|.|.|+.+.++|++++++.+.++||++|.||.+.+.++|+.||||+.|.++||++
T Consensus 55 ~~~G~~d~lP~g~~~~~~i~~~ir~~~~~~G~~ei~tP~l~~~el~~~sg~~d~~~~em~~~ 116 (458)
T 2i4l_A 55 EAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRI 116 (458)
T ss_dssp EETTEEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSCTTSEEE
T ss_pred cCCcceEECCCHHHHHHHHHHHHHHHHHHcCCEEEEcCccCcHHHHHhcCCccccccceEEE
Confidence 57999999999999999999999999999999999999999999999999999999999973
No 24
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=99.10 E-value=3.6e-11 Score=86.21 Aligned_cols=62 Identities=10% Similarity=0.002 Sum_probs=50.0
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHc--CCCCCCccccccC
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEV--AQLAQFDEELYKM 75 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~s--G~~~~~~e~~y~i 75 (75)
..+|++.|+|.|+.+.++|++++++.+.++||++|.||.+.+.++|+++ ||++.|.++||++
T Consensus 4 ~~~G~~~~~p~~~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~g~~~~~~~~~m~~~ 67 (420)
T 1qe0_A 4 IPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTF 67 (420)
T ss_dssp CCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEE
T ss_pred CCCcccccCHHHHHHHHHHHHHHHHHHHHcCCEEccCcccchHHHhhhccCCccchhhhheEEE
Confidence 3578999999999999999999999999999999999999999999999 9999999999963
No 25
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis}
Probab=99.01 E-value=1.5e-10 Score=85.21 Aligned_cols=62 Identities=13% Similarity=0.059 Sum_probs=58.0
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHc-CC-CCCCccccccC
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEV-AQ-LAQFDEELYKM 75 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~s-G~-~~~~~e~~y~i 75 (75)
..+|++.|+|+++.+.+.|++++++...++||++|.||.+.+.++|.++ || ++.++++||++
T Consensus 34 ~~~G~~d~lP~~~~~~~~l~~~i~~~~~~~Gy~eI~tP~le~~el~~~~~G~~~d~~~~~my~~ 97 (467)
T 4e51_A 34 GVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSF 97 (467)
T ss_dssp CCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTCTTSHHHHHTCCEE
T ss_pred CCCCceeeCHHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhccCCcccccccceEEE
Confidence 4789999999999999999999999999999999999999999999999 99 67788999963
No 26
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Probab=98.97 E-value=2e-10 Score=88.42 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=56.1
Q ss_pred CcceeecchHHHHHHHHHHHHHHHHH-hCCCeeeccCccchHHHHHHcCCCCCCcccccc
Q psy10664 16 GRGYFLKGPAVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 74 (75)
Q Consensus 16 ~~~~~l~~~ga~L~~aL~~f~~~~~~-~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~ 74 (75)
+|+|.|.|.|+.+.+.|++++++... +.||.+|.||.|.+.++|+.||||.+|.|.|++
T Consensus 91 ~G~~d~lP~G~~l~~~Ie~~~r~~~~~~~g~~EV~tP~l~~~~lwk~SGH~~~f~d~m~~ 150 (693)
T 2zt5_A 91 SGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVK 150 (693)
T ss_dssp TTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECCCCSEEEHHHHHHHTHHHHCEEEEEE
T ss_pred CCeEEECCChHHHHHHHHHHHHHHHHHhcCcEEEEeCCcccHHHHhhcCCccccccccee
Confidence 89999999999999999999999887 569999999999999999999999999998874
No 27
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=98.79 E-value=5.1e-09 Score=75.13 Aligned_cols=62 Identities=19% Similarity=0.193 Sum_probs=58.3
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHc-CC-CCCCccccccC
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEV-AQ-LAQFDEELYKM 75 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~s-G~-~~~~~e~~y~i 75 (75)
..+|++.|+|.++.+.+.|++.+++...++||++|.||.+-..++|+.+ |+ |+.+.++||++
T Consensus 5 ~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~ 68 (421)
T 1h4v_B 5 AVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTF 68 (421)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHHHHHcCCEEecccccccHHHhhhccCCcccccccceEEE
Confidence 4689999999999999999999999999999999999999999999999 88 88899899863
No 28
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=98.73 E-value=5.4e-09 Score=75.03 Aligned_cols=62 Identities=10% Similarity=0.074 Sum_probs=57.7
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHc-CC-CCCCccccccC
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEV-AQ-LAQFDEELYKM 75 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~s-G~-~~~~~e~~y~i 75 (75)
..+|++.|+|.++.+.+.+++.+++...++||++|.||.+-..++|+.+ |+ ++.++++||++
T Consensus 6 ~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~ 69 (423)
T 1htt_A 6 AIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTF 69 (423)
T ss_dssp CCTTCCCBCHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEEHHHHHHHHCSSSHHHHHTCEEE
T ss_pred CCCCccccCHHHHHHHHHHHHHHHHHHHHcCCEEecccccCHHHHHhhccCCchhhhhhheEEE
Confidence 5789999999999999999999999999999999999999999999998 88 77788888863
No 29
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A*
Probab=98.69 E-value=2.2e-08 Score=71.30 Aligned_cols=61 Identities=10% Similarity=0.038 Sum_probs=58.2
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHc--CCCCCCcccccc
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEV--AQLAQFDEELYK 74 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~s--G~~~~~~e~~y~ 74 (75)
..+|++.|.|.++.+.+.+++.+++...++||++|.||.+-..++|+.| |+++.++++||+
T Consensus 24 ~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~le~~el~~~s~~g~~~~~~~~my~ 86 (344)
T 1z7m_A 24 LPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQ 86 (344)
T ss_dssp CCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCE
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHHHcCCEEecCcccCcHHHHhhccCCccccccccEEE
Confidence 5789999999999999999999999999999999999999999999987 999999999996
No 30
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=98.66 E-value=2.3e-08 Score=72.28 Aligned_cols=61 Identities=7% Similarity=-0.055 Sum_probs=56.6
Q ss_pred hccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHH-cCCCCCCccccccC
Q psy10664 13 VAGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE-VAQLAQFDEELYKM 75 (75)
Q Consensus 13 ~~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~-sG~~~~~~e~~y~i 75 (75)
-..+|++.|+|.++.+.+.|++.+++...++||++|.||.+-..++|+. +|+ .+.++||++
T Consensus 7 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~--~~~~em~~~ 68 (434)
T 1wu7_A 7 EKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGE--ELLQQTYSF 68 (434)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETHHHHTTSCT--TGGGGSCEE
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHhhhccCC--ccccceEEE
Confidence 3578999999999999999999999999999999999999999999998 798 688889863
No 31
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=98.51 E-value=1.7e-07 Score=67.50 Aligned_cols=60 Identities=10% Similarity=0.002 Sum_probs=54.9
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCc-cccccC
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD-EELYKM 75 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~-e~~y~i 75 (75)
..+|++.|+|+++.+.+.|++.+++...++||++|.||.+-..++|..+| ..++ ++||++
T Consensus 25 ~p~G~~d~lP~~~~~~~~i~~~i~~~f~~~Gy~eI~tP~le~~el~~~~g--~~~~~~~my~~ 85 (373)
T 3rac_A 25 RPPGMQDGYPDFAKRRRAVETRLLSFVEDAGYEPVTSGLFEYVDTLLRAR--SPESSRDWIRL 85 (373)
T ss_dssp CCTTCCCCCTTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHTTS--CTTSCCCCCBC
T ss_pred CCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeEEECCceeeHHHHhhcC--CccchhceEEE
Confidence 46889999999999999999999999999999999999999999999998 4566 788874
No 32
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=98.40 E-value=2.2e-07 Score=67.36 Aligned_cols=60 Identities=17% Similarity=0.041 Sum_probs=55.3
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCccccccC
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYKM 75 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~i 75 (75)
..+|+..|+|+++.+.+.|++.+++...++||++|.||.+-..++|..+| +.++++||++
T Consensus 12 ~p~G~~d~lP~~~~~~~~i~~~l~~~~~~~Gy~eI~tP~lE~~el~~~~g--~~~~~~my~f 71 (400)
T 3od1_A 12 KPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETVGVVS--AILDQQLFKL 71 (400)
T ss_dssp CCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETTTHHHHS--SSCGGGSCEE
T ss_pred CCCcchhcCHHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcC--CccccceEEE
Confidence 46889999999999999999999999999999999999999999999987 5678889863
No 33
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens}
Probab=98.19 E-value=3.5e-07 Score=67.94 Aligned_cols=52 Identities=13% Similarity=-0.004 Sum_probs=43.9
Q ss_pred cCcceeecchHHHHHHHHHH-HHHHHHHhCC-CeeeccCccchHHHHHHcCCCCCCc
Q psy10664 15 GGRGYFLKGPAVCLQVGLVQ-YALSKWIEKG-YTPLYTPFFMRKEVMQEVAQLAQFD 69 (75)
Q Consensus 15 G~~~~~l~~~ga~L~~aL~~-f~~~~~~~~G-y~~v~~P~i~~~~~~~~sG~~~~~~ 69 (75)
+.++++|.|+|..|.+.|++ |...+..++| +.+|.||. .++|+.||||++|.
T Consensus 93 ~g~~p~~gP~G~~l~~nl~~~w~~~~~~~~~~~~eV~tp~---~~~~~~SGH~d~~~ 146 (459)
T 3ikl_A 93 SGCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALH---HKPGPLLPGDSAFR 146 (459)
T ss_dssp TTCSCCBCHHHHHHHHHHHHHHHHHHTTSSCSCEECCCCS---BCCSCCCSSCSCCT
T ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhccCceEeecccc---ccccccCcchhhhc
Confidence 44566999999999999998 6666666677 77799999 67799999999997
No 34
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=98.15 E-value=5.6e-07 Score=66.23 Aligned_cols=59 Identities=10% Similarity=0.070 Sum_probs=53.6
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHH-cCCCCCCcccccc
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQE-VAQLAQFDEELYK 74 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~-sG~~~~~~e~~y~ 74 (75)
..+|+..|.|+++.+.+.|++.+++...++||++|.||.+-..++|.. +|+. ++++||+
T Consensus 31 ~p~G~~d~lP~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~G~~--~~~~my~ 90 (456)
T 3lc0_A 31 PVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEE--ITEQMFN 90 (456)
T ss_dssp CSTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGGCCCSCCH--HHHTCEE
T ss_pred CCCCCcccCHhHHHHHHHHHHHHHHHHHHCCCEEEECCcEeehhhhccccccc--hhhceEE
Confidence 468899999999999999999999999999999999999999999986 4874 6778886
No 35
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=97.94 E-value=9.5e-06 Score=59.49 Aligned_cols=58 Identities=24% Similarity=0.201 Sum_probs=50.8
Q ss_pred cCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCcccccc
Q psy10664 15 GGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 74 (75)
Q Consensus 15 G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~ 74 (75)
-.|+.-|.|+.+.+.+.|++.+++...++||++|.||.+-..++|..+| ...+|+||+
T Consensus 15 p~G~~D~lP~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~~E~~~~~~~~G--~~~ke~m~~ 72 (465)
T 3net_A 15 PSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKG--NQGDNIIYG 72 (465)
T ss_dssp CTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHGGG--CC--CBEEE
T ss_pred CCCccccCHHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHHhccC--CCCccceEE
Confidence 4678889999999999999999999999999999999999999999987 444555886
No 36
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=97.86 E-value=2.1e-05 Score=56.78 Aligned_cols=58 Identities=12% Similarity=0.103 Sum_probs=47.7
Q ss_pred cCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCcccccc
Q psy10664 15 GGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 74 (75)
Q Consensus 15 G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~ 74 (75)
-.|+.-|.|+++.+.+.+++.+++...++||++|.||.+-..++|..+.- ...++||+
T Consensus 17 p~G~~D~lP~~~~~~~~i~~~~~~~~~~~Gy~eI~tP~le~~el~~~~~g--~~~~~~y~ 74 (464)
T 4g84_A 17 PKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYG--EDSKLIYD 74 (464)
T ss_dssp CTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCC------CCCB
T ss_pred CCCcCccCHHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhccccC--cCcceeEE
Confidence 45788899999999999999999999999999999999999999865432 23456775
No 37
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B*
Probab=97.76 E-value=1.3e-06 Score=64.33 Aligned_cols=55 Identities=9% Similarity=-0.133 Sum_probs=48.8
Q ss_pred cce-eecchHHHHHHHHHHHHHHHH--HhCCCeeeccCccchHHHHHHc--CC---CCCCccc
Q psy10664 17 RGY-FLKGPAVCLQVGLVQYALSKW--IEKGYTPLYTPFFMRKEVMQEV--AQ---LAQFDEE 71 (75)
Q Consensus 17 ~~~-~l~~~ga~L~~aL~~f~~~~~--~~~Gy~~v~~P~i~~~~~~~~s--G~---~~~~~e~ 71 (75)
|.+ .|.|.|+.|.+.|++++.+.+ .+.||.+|.||.+++.++|+++ || +++|.|+
T Consensus 52 G~~~~~~P~G~~l~~~i~~~~~~~~~~~~~g~~ev~tp~l~~~~~~~~s~~g~~~r~d~~~e~ 114 (454)
T 1g5h_A 52 GCHARFGPLGVELRKNLASQWWSSMVVFREQVFAVDSLHQEPGSSQPRDSAFRLVSPESIREI 114 (454)
T ss_dssp CCSCCBCHHHHHHHHHHHHHHHHHHTTTCTTEEECCCCSEECCCCSSCCCCCEEECHHHHHHH
T ss_pred cceeeeCchHHHHHHHHHHHHHHHHhhhcCCeEEEEcCccCChhhccccccCcccHHHHHHHH
Confidence 434 999999999999999999885 5789999999999999999987 88 8888764
No 38
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A
Probab=97.71 E-value=3.8e-05 Score=53.56 Aligned_cols=38 Identities=13% Similarity=0.224 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLA 66 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~ 66 (75)
.+++++++++.+.+.||++|.||.+.+.++++.+||++
T Consensus 73 ~~~l~~~ir~~~~~~Gf~EV~tP~Le~~~l~~~~g~~~ 110 (288)
T 3dsq_A 73 LLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGE 110 (288)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHHTTSSCC
T ss_pred HHHHHHHHHHHHHHCCCEEEECCeeecHHHHhhcCCCc
Confidence 47899999999999999999999999999999999987
No 39
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=97.67 E-value=4.1e-05 Score=56.50 Aligned_cols=57 Identities=12% Similarity=0.114 Sum_probs=45.7
Q ss_pred CcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCcccccc
Q psy10664 16 GRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFDEELYK 74 (75)
Q Consensus 16 ~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~e~~y~ 74 (75)
.|+.=|.|+++.+.+.+++.+++...++||++|.||.+-..++|.++.. ...++||+
T Consensus 71 ~G~~D~lP~~~~~~~~ie~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~g--e~~~~my~ 127 (517)
T 4g85_A 71 KGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYG--EDSKLIYD 127 (517)
T ss_dssp TTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHHCC--------CSCB
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhhcccC--cCcceeEE
Confidence 3566689999999999999999999999999999999999999865432 33566775
No 40
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A*
Probab=96.35 E-value=0.0047 Score=42.53 Aligned_cols=38 Identities=11% Similarity=0.235 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLA 66 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~ 66 (75)
.+.+++.+++.+..+||++|.||.+...+.+...+...
T Consensus 79 ~~~i~~~ir~~l~~~Gf~EV~Tp~l~~~~~~~~~~~~~ 116 (290)
T 3qtc_A 79 LGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDN 116 (290)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCCSEEETHHHHHTTCCT
T ss_pred HHHHHHHHHHHHHHCCCEEEECCceeeHHHHHhcCCCc
Confidence 46788889999999999999999999999998877654
No 41
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C*
Probab=94.61 E-value=0.007 Score=41.49 Aligned_cols=31 Identities=23% Similarity=0.384 Sum_probs=27.6
Q ss_pred HHHHHHH--HHHHhCCCeeeccCccchHHHHHH
Q psy10664 31 GLVQYAL--SKWIEKGYTPLYTPFFMRKEVMQE 61 (75)
Q Consensus 31 aL~~f~~--~~~~~~Gy~~v~~P~i~~~~~~~~ 61 (75)
.|+++++ +...++||++|.||.+-+.++|..
T Consensus 5 ~le~~~r~~~~~~~~Gy~eI~tP~le~~~l~~~ 37 (275)
T 1usy_A 5 DFEKVFSFYSKATKKGFSPFFVPALEKAEEPAG 37 (275)
T ss_dssp CHHHHHHHHHHHHHTTCEECCCCSEEECSSCCS
T ss_pred hHHHHHHHHHHHHHCCCEEecCccccchhhhcc
Confidence 4778888 899999999999999999998865
No 42
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=92.20 E-value=0.13 Score=36.50 Aligned_cols=35 Identities=11% Similarity=0.189 Sum_probs=31.2
Q ss_pred chHHHHHHHHHHHHHHHHHhCCCeeeccCccchHH
Q psy10664 23 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKE 57 (75)
Q Consensus 23 ~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~ 57 (75)
..-.+++..+++.+++++.++||.+|-||.|....
T Consensus 33 ~~~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~ 67 (345)
T 3a5y_A 33 IPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQAT 67 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEecC
Confidence 35678899999999999999999999999999754
No 43
>2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A*
Probab=91.12 E-value=0.18 Score=36.74 Aligned_cols=35 Identities=14% Similarity=0.320 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEV 58 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~ 58 (75)
.-.+++..+++.+++++.++||.+|-||.|..+..
T Consensus 130 ~~~r~Rs~i~~~iR~ff~~~gFlEVeTPiL~~s~~ 164 (435)
T 2xgt_A 130 ALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQV 164 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCeEeeccC
Confidence 35678889999999999999999999999987643
No 44
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A
Probab=91.09 E-value=0.2 Score=36.91 Aligned_cols=35 Identities=11% Similarity=0.265 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEV 58 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~ 58 (75)
.-.+++.++++.+++++.++||.+|-||.|.....
T Consensus 154 ~~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~s~~ 188 (456)
T 3m4p_A 154 QVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQC 188 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEEC---
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEeCCeeecCCC
Confidence 45678889999999999999999999999987654
No 45
>1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A*
Probab=90.72 E-value=0.29 Score=33.79 Aligned_cols=34 Identities=15% Similarity=0.361 Sum_probs=30.7
Q ss_pred chHHHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 23 GPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 23 ~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
..-.++...+++.+++.+.++||.+|.||.+...
T Consensus 12 ~~~~~~rs~i~~~ir~~f~~~GF~EVeTP~l~~~ 45 (294)
T 1nnh_A 12 SPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPI 45 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEECCCCEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEc
Confidence 4567889999999999999999999999999887
No 46
>1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A*
Probab=89.59 E-value=0.34 Score=35.86 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchHH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKE 57 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~ 57 (75)
.-.+++..+++.+++++.++||.+|-||.|...+
T Consensus 176 ~~~~~rs~i~~~ir~~~~~~gF~EV~TPil~~~~ 209 (487)
T 1eov_A 176 AIFRIQAGVCELFREYLATKKFTEVHTPKLLGAP 209 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSC
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEeCCEEEEec
Confidence 4568889999999999999999999999998854
No 47
>1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A*
Probab=89.54 E-value=0.29 Score=37.10 Aligned_cols=33 Identities=9% Similarity=0.189 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
.-.+++..+++.+++++.++||.+|-||.|.++
T Consensus 136 ~~l~~Rs~i~~~iR~fl~~~gFlEVeTPiL~~s 168 (585)
T 1c0a_A 136 QRLKTRAKITSLVRRFMDDHGFLDIETPMLTKA 168 (585)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEeCCEEecC
Confidence 345788899999999999999999999999965
No 48
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A*
Probab=89.30 E-value=0.35 Score=35.42 Aligned_cols=34 Identities=12% Similarity=0.233 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchHH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKE 57 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~ 57 (75)
.-.+++.++.+.+++++.++||.+|-||.|....
T Consensus 135 ~~~~~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~~ 168 (438)
T 3nem_A 135 AIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATA 168 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHCCcEEEeCCEEecCC
Confidence 3567888999999999999999999999998764
No 49
>1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A
Probab=89.06 E-value=0.32 Score=36.83 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 25 AVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 25 ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
-.+++..+++.+++++.++||.+|-||.|.++
T Consensus 143 ~l~~Rs~i~~~iR~fl~~~gF~EVeTPiL~~s 174 (580)
T 1l0w_A 143 NLRLRHRVIKAIWDFLDREGFVQVETPFLTKS 174 (580)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCC
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEeCCEEecC
Confidence 45778899999999999999999999999965
No 50
>1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A
Probab=88.87 E-value=0.4 Score=35.74 Aligned_cols=33 Identities=9% Similarity=0.209 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
.-.+++..+++.+++++.++||.+|-||.|...
T Consensus 181 ~~~r~Rs~i~~~iR~f~~~~gFlEVeTPiL~~~ 213 (504)
T 1e1o_A 181 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVI 213 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEECCCCSEESS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCeEEec
Confidence 456788899999999999999999999999843
No 51
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A*
Probab=88.87 E-value=0.42 Score=35.50 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
.-.+++..+++.+++++.++||.+|-||.|...
T Consensus 172 ~~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~ 204 (493)
T 3a74_A 172 KTFITRSLIIQSMRRYLDSHGYLEVETPMMHAV 204 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESS
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEEEECCeEEec
Confidence 456788899999999999999999999999854
No 52
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica}
Probab=88.82 E-value=0.42 Score=36.19 Aligned_cols=34 Identities=9% Similarity=0.046 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchHH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKE 57 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~ 57 (75)
.-.+++.++++.+++++.++||.+|-||.|....
T Consensus 242 ~~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~ 275 (548)
T 3i7f_A 242 AIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCS 275 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSBC---
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEeCCEEeccc
Confidence 3467888999999999999999999999998875
No 53
>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A*
Probab=88.34 E-value=0.49 Score=34.44 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
.-.+++..+++.+++++.++||.+|-||.+...
T Consensus 123 ~~~~~rs~i~~~ir~~f~~~gF~EV~TPil~~~ 155 (422)
T 1n9w_A 123 APLKVQAALVRGFRRYLDRQDFTEIFTPKVVRA 155 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEe
Confidence 456788899999999999999999999999865
No 54
>3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens}
Probab=88.22 E-value=0.45 Score=35.55 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
.-.+++..+++.+++++.++||.+|-||.|...
T Consensus 174 ~~~r~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~ 206 (521)
T 3bju_A 174 QKFIIRSKIITYIRSFLDELGFLEIETPMMNII 206 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEeCceeecc
Confidence 456788899999999999999999999999853
No 55
>4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis}
Probab=87.83 E-value=0.5 Score=35.58 Aligned_cols=33 Identities=6% Similarity=0.010 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
+-.+++.++++.+++++.++||.+|-||.|...
T Consensus 202 ~~fr~Rs~i~~~iR~ff~~~gFlEVeTPiL~~~ 234 (529)
T 4ex5_A 202 TTFRARTKAIASIRKFMGDADFMEVETPMLHPI 234 (529)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEeCCeeecc
Confidence 456788899999999999999999999999843
No 56
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii}
Probab=87.60 E-value=0.58 Score=34.10 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
.-.+++..+++.+++++.++||.+|-||.|...
T Consensus 132 ~~~~~rs~i~~~ir~ff~~~gF~eV~TP~l~~~ 164 (429)
T 1wyd_A 132 AVIKIQSLALKAFRETLYKEGFIEIFTPKIIAS 164 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESS
T ss_pred HHHHHHHHHHHHHHHHHhhCCCEEEECCEEEee
Confidence 456778899999999999999999999999865
No 57
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=86.60 E-value=0.71 Score=33.64 Aligned_cols=33 Identities=12% Similarity=0.315 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 24 PAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 24 ~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
.-.+++..+++.+++++.++||.+|-||.|...
T Consensus 133 ~~~~~rs~i~~~ir~~f~~~gF~eVeTP~l~~~ 165 (434)
T 1x54_A 133 AIMKVKETLIMAAREWLLKDGWHEVFPPILVTG 165 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEeCcEEEee
Confidence 456788899999999999999999999999865
No 58
>4f54_A Uncharacterized protein; PF13590 family protein, DUF4136, structural genomics, joint for structural genomics, JCSG; HET: MLY; 1.60A {Bacteroides thetaiotaomicron}
Probab=82.46 E-value=1.8 Score=28.66 Aligned_cols=49 Identities=10% Similarity=0.040 Sum_probs=37.5
Q ss_pred cccccchhccCcceeecch----H---------HHHHHHHHHHHHHHHHhCCCeee---ccCccc
Q psy10664 6 DSEAGAIVAGGRGYFLKGP----A---------VCLQVGLVQYALSKWIEKGYTPL---YTPFFM 54 (75)
Q Consensus 6 d~~~~~k~~G~~~~~l~~~----g---------a~L~~aL~~f~~~~~~~~Gy~~v---~~P~i~ 54 (75)
|.++.+..+.=+.|.|.+. + -..++.|++-+.++|.++||+++ ..|+++
T Consensus 22 DYD~~adFs~YkTya~~~~~~~~~~~~~~~~~~dl~~kRI~~aV~~~L~akG~~~v~~~~~pDll 86 (197)
T 4f54_A 22 NYDXQANFXDFSTFYLADXILVISDSXEPEYLEGEGAEQILAAYTENMEAXGYQPAADXESADLG 86 (197)
T ss_dssp EECTTCCGGGCCEEEECSSCEEECSSSSCEECCSHHHHHHHHHHHHHHHHTTCEECSSTTTCSEE
T ss_pred cCCCccCcccceeeeeccccccccccccccccCcHHHHHHHHHHHHHHHhcCceecCCCCCCCEE
Confidence 6677777777787777542 1 25688899999999999999999 567754
No 59
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens}
Probab=81.94 E-value=1.4 Score=33.86 Aligned_cols=32 Identities=16% Similarity=0.263 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHH-hCCCeeeccCccchH
Q psy10664 25 AVCLQVGLVQYALSKWI-EKGYTPLYTPFFMRK 56 (75)
Q Consensus 25 ga~L~~aL~~f~~~~~~-~~Gy~~v~~P~i~~~ 56 (75)
-.+++.++++.+++++. ++||.+|-||.|..+
T Consensus 147 ~lr~Rs~i~~~iR~f~~~~~gF~EVeTPiL~~s 179 (617)
T 4ah6_A 147 NLRLRSQMVMKMREYLCNLHGFVDIETPTLFKR 179 (617)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCEECCCCSSBCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEeCCeeccC
Confidence 45778899999999996 799999999999863
No 60
>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis}
Probab=71.24 E-value=3.5 Score=26.82 Aligned_cols=34 Identities=3% Similarity=0.077 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhCCCeeeccCccchHHHHHHcC
Q psy10664 30 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA 63 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG 63 (75)
+.+.+-+++.+...||++|.|-.++.++.+..-+
T Consensus 7 ~~~~~~ir~~L~~~G~~Evitysf~s~~~~~~~~ 40 (213)
T 3ica_A 7 YKWQTVVSEQLVGAGFNEILNNSLTAGSYYEGLK 40 (213)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCSEEEGGGGTTCS
T ss_pred HHHHHHHHHHHHHCCCceeeeccCCCHHHHhhhc
Confidence 4567778888899999999999999988665543
No 61
>3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis}
Probab=70.74 E-value=3.7 Score=26.73 Aligned_cols=34 Identities=9% Similarity=0.168 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhCCCeeeccCccchHHHHHHcC
Q psy10664 30 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA 63 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG 63 (75)
+.+.+-+++.+...||++|.|-.++..+.++.-+
T Consensus 7 ~~~~~~ir~~l~~~G~~Evitysf~~~~~~~~~~ 40 (213)
T 3ig2_A 7 NKLQNLVAEQLVGCGFNEILNNSLTRAAYYDGLE 40 (213)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCSEECGGGGTTCS
T ss_pred HHHHHHHHHHHHHCCCeEEeccccCCHHHHHhhc
Confidence 4567777888899999999999999988765544
No 62
>2lc0_A Putative uncharacterized protein TB39.8; FHAA, kinase substrate, protein binding; NMR {Mycobacterium tuberculosis}
Probab=70.09 E-value=2.9 Score=25.90 Aligned_cols=33 Identities=12% Similarity=0.080 Sum_probs=28.5
Q ss_pred ecchHHHHHHHHHHHHHHHHHhCCCeeeccCcc
Q psy10664 21 LKGPAVCLQVGLVQYALSKWIEKGYTPLYTPFF 53 (75)
Q Consensus 21 l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i 53 (75)
+.+.+..|...|.+++.+...++||+.+-+|.+
T Consensus 74 l~~~~~~l~~el~~~l~~~a~~qgy~~~G~v~V 106 (132)
T 2lc0_A 74 LGADPELKSTGFARDLADYIQEQGWQTYGDVVV 106 (132)
T ss_dssp HCSCSHHHHHHHHHHHHHHHHHHTCBCSSCCEE
T ss_pred HHhhhHHHHHHHHHHHHHHHHHCCCeecCCeEE
Confidence 345567899999999999999999999988865
No 63
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=65.17 E-value=5.8 Score=25.32 Aligned_cols=29 Identities=17% Similarity=0.049 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhCCCeeeccCccchHHH
Q psy10664 30 VGLVQYALSKWIEKGYTPLYTPFFMRKEV 58 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~ 58 (75)
+.|++=++++|.+.||++..||.=|...+
T Consensus 13 ~~lV~pmR~ELt~~Gf~eL~T~e~Vd~a~ 41 (147)
T 3fhk_A 13 RQLVVPMRRELTGAGFEELTTAEEVENFM 41 (147)
T ss_dssp HHHHHHHHHHHHTTTCEECCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCHHHHHHHH
Confidence 45677789999999999999999986654
No 64
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=62.87 E-value=2.8 Score=27.85 Aligned_cols=41 Identities=15% Similarity=0.057 Sum_probs=26.9
Q ss_pred cCcceeecchH-HHHHHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 15 GGRGYFLKGPA-VCLQVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 15 G~~~~~l~~~g-a~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
.+|..++..++ ..-..+|.+ +++.++++||+.|..+.++..
T Consensus 203 ~~G~IiL~Hd~~~~t~~aL~~-ii~~l~~~Gy~fvtl~ell~~ 244 (247)
T 2j13_A 203 HPGSILLLHAISKDNAEALAK-IIDDLREKGYHFKSLDDLVKS 244 (247)
T ss_dssp CTTBEEEECCCSTTHHHHHHH-HHHHHHHTTCEEECHHHHHHT
T ss_pred CCCeEEEEeCCcHhHHHHHHH-HHHHHHHCCCEEEEhHHhhcc
Confidence 34555555443 223455544 677889999999998877654
No 65
>2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A*
Probab=62.09 E-value=7.8 Score=26.47 Aligned_cols=28 Identities=11% Similarity=-0.003 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCccchH
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~i~~~ 56 (75)
.+.+++-+++.+...||++|.+|.+...
T Consensus 55 ~~~~~~~iR~~l~~~Gf~Ev~~s~l~~~ 82 (294)
T 2rhq_A 55 LTRTVEEIEDLFLGLGYEIVDGYEVEQD 82 (294)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcceeee
Confidence 4456677777888999999988877664
No 66
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=55.85 E-value=12 Score=24.38 Aligned_cols=42 Identities=12% Similarity=0.042 Sum_probs=27.6
Q ss_pred ccCcceeecchHH-HHHHHHHHHHHHHHHhCCCeeeccCccch
Q psy10664 14 AGGRGYFLKGPAV-CLQVGLVQYALSKWIEKGYTPLYTPFFMR 55 (75)
Q Consensus 14 ~G~~~~~l~~~ga-~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~ 55 (75)
..+|..++..++. .--.++..-+++.++++||+.|..+.++.
T Consensus 180 ~~~g~IiL~Hd~~~~t~~~~L~~ii~~l~~~Gy~fvtl~ell~ 222 (230)
T 2y8u_A 180 DAGGNIVLAHDIHYWTVASLAERMLQEVNARGLIATTVGDCLG 222 (230)
T ss_dssp HTTCCEEEECTTSHHHHHTHHHHHHHHHHHTTCEEECHHHHTT
T ss_pred CCCCEEEEEECCCcchHHHHHHHHHHHHHHCCCEEEEhHHhhC
Confidence 3556566665552 11123456678889999999999877764
No 67
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=55.01 E-value=3.6 Score=27.07 Aligned_cols=43 Identities=16% Similarity=0.070 Sum_probs=28.0
Q ss_pred cCcceeecchHH-HHHHHHHHHHHHHHHhCCCeeeccCccchHHH
Q psy10664 15 GGRGYFLKGPAV-CLQVGLVQYALSKWIEKGYTPLYTPFFMRKEV 58 (75)
Q Consensus 15 G~~~~~l~~~ga-~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~ 58 (75)
.+|..++..++. .-..+|.. +++.++++||+.|....++....
T Consensus 191 ~~g~Iil~Hd~~~~t~~aL~~-ii~~l~~~Gy~fvtl~el~~~~~ 234 (240)
T 1ny1_A 191 HPGAIYLLHTVSRDNAEALDD-AITDLKKQGYTFKSIDDLMFEKE 234 (240)
T ss_dssp CTTEEEEECSCSTTHHHHHHH-HHHHHHHHTCEEECHHHHHHHHH
T ss_pred CCCeEEEEcCCChhHHHHHHH-HHHHHHHCCCEEEEhHHhhcccc
Confidence 345555555542 22345544 67788899999999888776644
No 68
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=52.92 E-value=9.4 Score=25.26 Aligned_cols=41 Identities=17% Similarity=0.101 Sum_probs=27.7
Q ss_pred cCcceeecchHH-HHHHHHHHHHHHHHHhCCCeeeccCccch
Q psy10664 15 GGRGYFLKGPAV-CLQVGLVQYALSKWIEKGYTPLYTPFFMR 55 (75)
Q Consensus 15 G~~~~~l~~~ga-~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~ 55 (75)
.+|..++..++. .--.++..-+++.++++||+.|..+.++.
T Consensus 198 ~~g~IiL~Hd~~~~t~~~~l~~ii~~lk~~Gy~fvtl~ell~ 239 (254)
T 2iw0_A 198 ANSYIVLSHDVHEQTVVSLTQKLIDTLKSKGYRAVTVGECLG 239 (254)
T ss_dssp GCCEEEEECTTSHHHHHTHHHHHHHHHHHTTCEECCHHHHTT
T ss_pred CCCEEEEEcCCCcccHHHHHHHHHHHHHHCCCEEEEHHHhhC
Confidence 456666666652 11123456678889999999998887764
No 69
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=51.90 E-value=14 Score=27.69 Aligned_cols=29 Identities=17% Similarity=0.107 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhCCCeeeccCccchHHH
Q psy10664 30 VGLVQYALSKWIEKGYTPLYTPFFMRKEV 58 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~ 58 (75)
+.+.+-+++.+...||+++.|+.++..+.
T Consensus 394 ~~~~~~ir~~l~~~Gf~Evitysf~s~~~ 422 (589)
T 3l4g_B 394 NKLTELLRHDMAAAGFTEALTFALCSQED 422 (589)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCSEECHHH
T ss_pred HHHHHHHHHHHHHCCCEEEecCcccCHHH
Confidence 45577788888999999999999999884
No 70
>1sx5_A Type II restriction enzyme ecorv; endonuclease, protein-DNA complex, hydrolase/DNA complex; 1.50A {Escherichia coli} SCOP: c.52.1.2 PDB: 1stx_A 1eon_A* 1eo3_A* 1eo4_A* 1eoo_A* 1eop_A* 1rve_A 2b0d_A 2b0e_A 1b94_A* 1az3_A 1az0_A* 1b95_A* 1bgb_A* 1bsu_A* 1bua_A* 1rv5_A 1rva_A* 1rvb_A* 1rvc_A* ...
Probab=51.39 E-value=19 Score=24.68 Aligned_cols=25 Identities=8% Similarity=-0.124 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCeeecc
Q psy10664 26 VCLQVGLVQYALSKWIEKGYTPLYT 50 (75)
Q Consensus 26 a~L~~aL~~f~~~~~~~~Gy~~v~~ 50 (75)
-.||..+...+.+++.++||+.+.+
T Consensus 41 kI~Ei~~fP~l~~fA~~~g~~l~~~ 65 (244)
T 1sx5_A 41 TIFELFSRPIINKIAEKHGYIVEEP 65 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEec
Confidence 4678888888899999999999987
No 71
>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}
Probab=46.86 E-value=24 Score=20.50 Aligned_cols=45 Identities=11% Similarity=0.033 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCc----cchHHHHHHcCCCCCCccccc
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPF----FMRKEVMQEVAQLAQFDEELY 73 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~----i~~~~~~~~sG~~~~~~e~~y 73 (75)
-.+|.+.+.+...++|++.+..=. .-...+|++.|+-+..+...|
T Consensus 121 g~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~ 169 (183)
T 3i9s_A 121 GLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIREKEYY 169 (183)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHHTTCEECTTEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEecCChHHHHHHHHcCCceeccchhh
Confidence 345555555566667887664332 223578999998765543333
No 72
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A*
Probab=46.08 E-value=16 Score=27.57 Aligned_cols=30 Identities=10% Similarity=0.293 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCccchHHH
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPFFMRKEV 58 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~ 58 (75)
.+.+++-+++.+...||+++.+|.++..+.
T Consensus 49 ~~~~~~~Ir~~l~~lGF~Ev~~~s~~s~~~ 78 (534)
T 2du3_A 49 LFATIQRLREAYLSIGFSEVVNPLIVEDVH 78 (534)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCCEEETHH
T ss_pred HHHHHHHHHHHHHHCCCEEEeCceEeChhh
Confidence 455677778888899999999999998864
No 73
>3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus}
Probab=45.23 E-value=39 Score=18.86 Aligned_cols=41 Identities=7% Similarity=-0.036 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCc
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD 69 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~ 69 (75)
-.+|.+.+.+...+.|+..+..-.--...+|++.|+-+.-.
T Consensus 86 g~~Ll~~~~~~a~~~g~~~i~l~n~~a~~~y~k~GF~~~~~ 126 (150)
T 3e0k_A 86 GLLLLNYMKHRSKSENINQIFVLTTHSLHWFREQGFYEVGV 126 (150)
T ss_dssp HHHHHHHHHHHHHTTTCCEEECCCSSCHHHHHHHTCCCCCG
T ss_pred HHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHHcCCeecCc
Confidence 34555555555667888877665444567899999766443
No 74
>1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A*
Probab=44.46 E-value=20 Score=25.34 Aligned_cols=29 Identities=10% Similarity=0.035 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCccchHH
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPFFMRKE 57 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~ 57 (75)
...+++-+++.+...||++|.+|.+....
T Consensus 103 ~~~~~~~Ir~~f~~~Gf~Ev~~p~v~~~~ 131 (350)
T 1b7y_A 103 ITLMERELVEIFRALGYQAVEGPEVESEF 131 (350)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHH
T ss_pred HHHHHHHHHHHHHHCCCEEEECcchhcch
Confidence 35566667777888999999999886653
No 75
>3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A*
Probab=40.47 E-value=46 Score=18.36 Aligned_cols=39 Identities=13% Similarity=-0.028 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCCCc
Q psy10664 30 VGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQFD 69 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~~~ 69 (75)
.+|.+.+.+...+ |+..+..-.--...+|++.|+-+.-+
T Consensus 95 ~~Ll~~~~~~a~~-~~~~i~l~~~~a~~~y~k~GF~~~~~ 133 (150)
T 3gy9_A 95 TALLEKIMSEAFL-TYDRLVLYSEQADPFYQGLGFQLVSG 133 (150)
T ss_dssp HHHHHHHHHHHTT-TCSEEEECCSSCHHHHHHTTCEECCC
T ss_pred HHHHHHHHHHHHh-CCCEEEEechHHHHHHHHCCCEEeee
Confidence 4444555555555 66666544444566777777655433
No 76
>2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV}
Probab=38.09 E-value=52 Score=18.19 Aligned_cols=40 Identities=5% Similarity=-0.072 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQ 67 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~ 67 (75)
+-.+|.+.+.+...++|++.+..-..-...++++.|+-+.
T Consensus 86 ig~~ll~~~~~~~~~~g~~~i~l~~~~a~~~y~k~GF~~~ 125 (142)
T 2ozh_A 86 YSKALMDAVMAHPDLQGLRRFSLATSDAHGLYARYGFTPP 125 (142)
T ss_dssp HHHHHHHHHHHCGGGSSCSEEECCCSSCHHHHHTTTCCSC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEecchHHHHHHHCCCEEc
Confidence 4456666666666778887765433355678999997654
No 77
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=37.85 E-value=32 Score=23.57 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=22.8
Q ss_pred cCcceeecchH---HHHHHHHHHHHHHHHHhCCCeeec
Q psy10664 15 GGRGYFLKGPA---VCLQVGLVQYALSKWIEKGYTPLY 49 (75)
Q Consensus 15 G~~~~~l~~~g---a~L~~aL~~f~~~~~~~~Gy~~v~ 49 (75)
+++..++..++ ..-..||.+ +++.++++||+.|.
T Consensus 273 ~~g~IIL~Hd~~g~~~t~~aL~~-iI~~Lk~~Gy~fvt 309 (311)
T 2w3z_A 273 PNVQVVLMHDISEKTITLASLPQ-IIRYYKDRGYTFAV 309 (311)
T ss_dssp TTEEEEEEECSTTCHHHHHHHHH-HHHHHHHTTCEECE
T ss_pred CCCEEEEEeCCCChhhHHHHHHH-HHHHHHHCCCEEEe
Confidence 35556665554 244456665 77788999999875
No 78
>2egv_A UPF0088 protein AQ_165; RSME, methyltransferase, rRNA modification, PUA domain, M3U, SAM, structural genomics, NPPSFA; HET: SAM; 1.45A {Aquifex aeolicus} PDB: 2egw_A*
Probab=36.93 E-value=26 Score=23.09 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=26.1
Q ss_pred eeecchHHHHHHHHHHHHHHHHHhCCCeeecc-CccchHHHHH
Q psy10664 19 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYT-PFFMRKEVMQ 60 (75)
Q Consensus 19 ~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~-P~i~~~~~~~ 60 (75)
.+.=|+|-.=+..+ +.+.++||++|.- |-|+|.|+.-
T Consensus 182 l~IGPEGGfs~~Ei-----~~~~~~G~~~vsLG~rILRtETA~ 219 (229)
T 2egv_A 182 VVVGPEGGFSKRES-----QILREKGFKSVLLEPYTLRTETAV 219 (229)
T ss_dssp EEECCTTCCCHHHH-----HHHHHTTCEEECCSSSCCCHHHHH
T ss_pred EEEcCCCCCCHHHH-----HHHHHCCCEEecCCCCeeEhHHHH
Confidence 44455665555554 3446789999998 9999999853
No 79
>1jg5_A GTP cyclohydrolase I feedback regulatory protein; alpha/beta structure, beta sheet, protein binding; 2.60A {Rattus norvegicus} SCOP: d.205.1.1 PDB: 1is8_K* 1is7_K* 1wpl_K*
Probab=36.59 E-value=23 Score=20.45 Aligned_cols=16 Identities=25% Similarity=0.306 Sum_probs=13.3
Q ss_pred HHHHHHHhCCCeeecc
Q psy10664 35 YALSKWIEKGYTPLYT 50 (75)
Q Consensus 35 f~~~~~~~~Gy~~v~~ 50 (75)
-.+|+|++.||+.|+.
T Consensus 54 ~VLnKLE~~G~rVvsm 69 (83)
T 1jg5_A 54 IVLDKLECRGFRVLSM 69 (83)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHhccCeEEEEE
Confidence 4689999999998864
No 80
>1wn4_A Vontr protein; helix, plant protein; NMR {Synthetic} SCOP: j.113.1.1
Probab=35.08 E-value=35 Score=15.70 Aligned_cols=13 Identities=31% Similarity=0.347 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHH
Q psy10664 26 VCLQVGLVQYALS 38 (75)
Q Consensus 26 a~L~~aL~~f~~~ 38 (75)
..||.||+.|+..
T Consensus 9 plLEEALv~~ak~ 21 (28)
T 1wn4_A 9 HLLEEALVAFAKK 21 (28)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 5799999999875
No 81
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=35.03 E-value=29 Score=21.65 Aligned_cols=39 Identities=8% Similarity=-0.126 Sum_probs=23.7
Q ss_pred CcceeecchH-HHHHHHHHHHHHHHHHhCCCeeeccCccch
Q psy10664 16 GRGYFLKGPA-VCLQVGLVQYALSKWIEKGYTPLYTPFFMR 55 (75)
Q Consensus 16 ~~~~~l~~~g-a~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~ 55 (75)
+|..++..++ ..-..|| .-+++.++++||+.+.....+.
T Consensus 148 ~g~IiL~Hd~~~~t~~al-~~ii~~l~~~Gy~~v~l~~~~~ 187 (195)
T 2cc0_A 148 NGQVILMHDWPANTLAAI-PRIAQTLAGKGLCSGMISPQTG 187 (195)
T ss_dssp TTCEEEEESSCHHHHHHH-HHHHHHHHHTTEEECEECTTTS
T ss_pred cCeEEEECCCchhHHHHH-HHHHHHHHHCCCEEEEeCcccC
Confidence 3445555444 2333454 4466788999999987665543
No 82
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=33.61 E-value=32 Score=23.07 Aligned_cols=37 Identities=11% Similarity=0.156 Sum_probs=26.2
Q ss_pred ceeecchHHHHHHHHHHHHHHHHHhCCCeeecc-CccchHHHH
Q psy10664 18 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYT-PFFMRKEVM 59 (75)
Q Consensus 18 ~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~-P~i~~~~~~ 59 (75)
..+.=|+|-.=+..+. .+.+.||++|+- |-|+|.|+.
T Consensus 193 ~l~IGPEGGfs~~Ei~-----~~~~~G~~~vsLG~rILRtETA 230 (257)
T 1vhy_A 193 RLLIGSEGGLSAQEIA-----QTEQQGFTEILLGKRVLRTETA 230 (257)
T ss_dssp EEEECCTTCCCHHHHH-----HHHHTTCEEEBCCSSCCCHHHH
T ss_pred EEEEcCCCCCCHHHHH-----HHHHCCCEEecCCCCeeehHHH
Confidence 3445566665555543 456789999977 999999983
No 83
>2kup_A Fibroblast growth factor receptor substrate 3; complex, SNT-2, PTB domain, HALK, structural genomics, signa protein, NPPSFA; NMR {Homo sapiens} PDB: 2ys5_A
Probab=33.46 E-value=17 Score=23.08 Aligned_cols=61 Identities=11% Similarity=0.052 Sum_probs=42.0
Q ss_pred Ccccccccchhc-cCcceee-cchHHHHHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCCCCC
Q psy10664 3 DGVDSEAGAIVA-GGRGYFL-KGPAVCLQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQLAQ 67 (75)
Q Consensus 3 ~~~d~~~~~k~~-G~~~~~l-~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~~~~ 67 (75)
+.|-||.|.+.. |+|.+.+ ..++-.|.+.+...+ ..+-...+..|.++.++.-.+.+++|+
T Consensus 70 ~~FsFEaGRrC~tGeGiF~F~t~~~e~If~~l~~~i----q~~~~~~~~~p~~~~~~~h~~~~~~~~ 132 (146)
T 2kup_A 70 NLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDLM----QCNSINVMEEPVIITRNSHPAELDLPR 132 (146)
T ss_dssp TEEEEEECTTSSSCSEEEEEECTTHHHHHHHHHHHH----TTCCTTCSCCCCCTTSSCSCCCCCCCC
T ss_pred CEEEEEcCCCCCCCCCEEEEEcCCHHHHHHHHHHHH----hcCccccccCCcccccCCCCccccccc
Confidence 467788777655 7886655 456666666666443 456778888899988877666666654
No 84
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A*
Probab=32.43 E-value=67 Score=17.84 Aligned_cols=37 Identities=8% Similarity=-0.161 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhCCCeeecc-CccchHHHHHHcCCCC
Q psy10664 30 VGLVQYALSKWIEKGYTPLYT-PFFMRKEVMQEVAQLA 66 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~-P~i~~~~~~~~sG~~~ 66 (75)
.+|.+.+.+...++|+..+.. -.--+..+|++.|+-+
T Consensus 119 ~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~Y~k~GF~~ 156 (165)
T 4ag7_A 119 AVLLKTLVSLGKSLGVYKISLECVPELLPFYSQFGFQD 156 (165)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECSCGGGHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEEeCHHHHHHHHHCCCCc
Confidence 445555555555667765443 2223458999999743
No 85
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=31.91 E-value=71 Score=17.93 Aligned_cols=38 Identities=13% Similarity=0.048 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCc----cchHHHHHHcCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPF----FMRKEVMQEVAQLA 66 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~----i~~~~~~~~sG~~~ 66 (75)
-.+|.+.+.+.+.++|++.+..=. .-...+|++.|+-.
T Consensus 113 g~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~ 154 (165)
T 1s3z_A 113 AKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEE 154 (165)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEEecCcCCHHHHHHHHHcCCeE
Confidence 344555555555567887655322 23356799998654
No 86
>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti}
Probab=30.97 E-value=60 Score=19.08 Aligned_cols=38 Identities=8% Similarity=0.160 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhCCCeeecc--CccchHHHHHHcCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYT--PFFMRKEVMQEVAQLA 66 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~--P~i~~~~~~~~sG~~~ 66 (75)
-.+|.+.+.+...++|+..+.+ -..-...++++.|+-.
T Consensus 144 g~~Ll~~~~~~a~~~g~~~i~~~~~n~~a~~~Y~k~GF~~ 183 (217)
T 4fd4_A 144 GQRLLQFQMDLSKKLGFKAISGDFTSVFSVKLAEKLGMEC 183 (217)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEECSHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHCCCeE
Confidence 3444455555555667766653 2333456789988643
No 87
>1xqi_A Nucleoside diphosphate kinase; alpha/beta sandwich, ferredoxin fold, transferase; HET: PGE; 2.50A {Pyrobaculum aerophilum} SCOP: d.58.6.1
Probab=30.52 E-value=25 Score=22.99 Aligned_cols=36 Identities=25% Similarity=0.252 Sum_probs=29.1
Q ss_pred ccCcceeecchHHHHHHHHHHHHHHHHHhCCCeeeccC
Q psy10664 14 AGGRGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTP 51 (75)
Q Consensus 14 ~G~~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P 51 (75)
...-+.+++|+++. +.++.-+++.+.++||+.+..=
T Consensus 15 ~erTlviIKPDav~--r~l~G~Ii~r~e~~Gf~Iv~~K 50 (195)
T 1xqi_A 15 VEKTLLILKPDAVA--RGLVDEIISRFKKAGLKIVALK 50 (195)
T ss_dssp CCEEEEEECHHHHH--TTCHHHHHHHHHHHTCEEEEEE
T ss_pred hhcEEEEEchhHhh--cccHHHHHHHHHHCCCEEEEEE
Confidence 35668999999986 6677888899999999988653
No 88
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp}
Probab=30.04 E-value=73 Score=17.52 Aligned_cols=40 Identities=8% Similarity=0.012 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHhCCCeeeccCc----cchHHHHHHcCCCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYTPF----FMRKEVMQEVAQLAQ 67 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~P~----i~~~~~~~~sG~~~~ 67 (75)
+-.+|.+.+.+...+.|++.+..-. .-...++++.|+-+.
T Consensus 95 ig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~ 138 (163)
T 3d8p_A 95 IGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREI 138 (163)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEEecCCCHHHHHHHHHCCCEEe
Confidence 3455666666666677887776422 223678999997544
No 89
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A
Probab=28.91 E-value=62 Score=17.55 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhCCCeeec----cCccchHHHHHHcCCCCC
Q psy10664 30 VGLVQYALSKWIEKGYTPLY----TPFFMRKEVMQEVAQLAQ 67 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~----~P~i~~~~~~~~sG~~~~ 67 (75)
.+|.+.+.+...+.|+..+. +.......++++.|+-+.
T Consensus 102 ~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~ 143 (152)
T 1qsm_A 102 GKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVGYKAP 143 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHEEECS
T ss_pred HHHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHcCCCcc
Confidence 44444455555567877663 233344668999996543
No 90
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B*
Probab=28.88 E-value=41 Score=26.26 Aligned_cols=31 Identities=10% Similarity=-0.033 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCccchHHHH
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVM 59 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~ 59 (75)
.+.+.+-+++.+...||+++.|..++..+.+
T Consensus 495 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~ 525 (795)
T 2rhq_B 495 RQHKTRTLKETLEGAGLNQAITYSLVSKDHA 525 (795)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEECTTTT
T ss_pred HHHHHHHHHHHHHHCCCEEEecCCccCHHHH
Confidence 4567777888889999999999999988755
No 91
>2yma_A YOS9P, protein OS-9 homolog; carbohydrate binding protein, quality control, endoplasmic reticulum-associated protein degradation; 2.54A {Saccharomyces cerevisiae}
Probab=28.33 E-value=17 Score=23.45 Aligned_cols=13 Identities=31% Similarity=0.416 Sum_probs=11.0
Q ss_pred hccCcceeecchH
Q psy10664 13 VAGGRGYFLKGPA 25 (75)
Q Consensus 13 ~~G~~~~~l~~~g 25 (75)
.-|+|||+|.|+-
T Consensus 18 FLG~GfYfL~Pkn 30 (161)
T 2yma_A 18 FLGSGIYFLRPFN 30 (161)
T ss_dssp EEETTEEEEEESS
T ss_pred EeecceEEecCCC
Confidence 5699999999875
No 92
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=28.15 E-value=82 Score=17.49 Aligned_cols=39 Identities=10% Similarity=-0.084 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCCeeeccC-ccchHHHHHHcCCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTP-FFMRKEVMQEVAQLAQ 67 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P-~i~~~~~~~~sG~~~~ 67 (75)
-.+|.+.+.+...++|+..+..- .--+..+|++.|+-+.
T Consensus 114 g~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~ 153 (161)
T 3i3g_A 114 GKALIMDLCEISRSKGCYKVILDSSEKSLPFYEKLGFRAH 153 (161)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTTHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEecccchhHHHhcCCeec
Confidence 34555555555566687655321 2223588999996543
No 93
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=28.08 E-value=87 Score=17.72 Aligned_cols=38 Identities=8% Similarity=-0.046 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhCCCeeeccCc----cchHHHHHHcCCCCC
Q psy10664 30 VGLVQYALSKWIEKGYTPLYTPF----FMRKEVMQEVAQLAQ 67 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~P~----i~~~~~~~~sG~~~~ 67 (75)
.+|.+.+.+...+.|++.+..=. .....+|++.|+-..
T Consensus 114 ~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~ 155 (166)
T 4evy_A 114 TMLIRQAEVWAKQFSCTEFASDAALDNVISHAMHRSLGFQET 155 (166)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHcCCEec
Confidence 45555555555677887665322 234578999996543
No 94
>3or1_C Sulfite reductase GAMA; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} SCOP: d.203.1.1 PDB: 3or2_C* 2v4j_C* 2xsj_C*
Probab=27.91 E-value=33 Score=20.37 Aligned_cols=31 Identities=6% Similarity=0.222 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVAQ 64 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG~ 64 (75)
=.+.+++|++++..++|..|. -+.+.+.+|.
T Consensus 45 ~HW~vI~flR~yY~e~~~~P~------iR~l~K~~~~ 75 (105)
T 3or1_C 45 DHQKIIDFLQDYYKANGIAPM------VRILSKNTGF 75 (105)
T ss_dssp HHHHHHHHHHHHHHHHSSCCC------HHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHCCCCc------HHHHHHHHCc
Confidence 367899999999999998762 2455555554
No 95
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=27.62 E-value=87 Score=17.59 Aligned_cols=38 Identities=5% Similarity=-0.089 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHhCCCeeeccCcc----chHHHHHHcCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYTPFF----MRKEVMQEVAQL 65 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~P~i----~~~~~~~~sG~~ 65 (75)
+-.+|.+.+.+...+.|+..+..-.. -....|+++|+-
T Consensus 98 iG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF~ 139 (150)
T 2dxq_A 98 YGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGFV 139 (150)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEECCCCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHcCCc
Confidence 34555555556666678876653322 235679999965
No 96
>1v6z_A Hypothetical protein TTHA0657; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferase; 2.00A {Thermus thermophilus HB8} SCOP: b.122.1.2 c.116.1.5 PDB: 2cx8_A* 2z0y_A*
Probab=27.35 E-value=30 Score=22.76 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=24.5
Q ss_pred eeecchHHHHHHHHHHHHHHHHHhCCCeeecc-CccchHHHHH
Q psy10664 19 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLYT-PFFMRKEVMQ 60 (75)
Q Consensus 19 ~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~-P~i~~~~~~~ 60 (75)
.+.=|+|-.=+..+ +.+.++||++|+- |-|+|.|+.-
T Consensus 178 l~IGPEGGfs~~Ei-----~~~~~~G~~~vsLG~rILRtETA~ 215 (228)
T 1v6z_A 178 LAVGPEGGFAEEEV-----ALLEARGFTPVSLGRRILRAETAA 215 (228)
T ss_dssp EEECCTTCCCHHHH-----HHHHHHTEEEECCCSSCCCHHHHH
T ss_pred EEEcCCCCCCHHHH-----HHHHHCCCEEecCCCCeeEeHHHH
Confidence 33445555444443 3446679999976 9999999853
No 97
>3m4i_A DNA gyrase subunit B; GYRB, toprim, type II topoisomerase, tuberculosi quinolone binding site, DNA binding site, ATP-binding; HET: DNA; 1.95A {Mycobacterium tuberculosis} PDB: 3ig0_A* 2zjt_A*
Probab=27.35 E-value=87 Score=21.34 Aligned_cols=33 Identities=18% Similarity=0.141 Sum_probs=26.5
Q ss_pred chHHHHHHHHHHHHHHH---HHhCCCeeeccCccch
Q psy10664 23 GPAVCLQVGLVQYALSK---WIEKGYTPLYTPFFMR 55 (75)
Q Consensus 23 ~~ga~L~~aL~~f~~~~---~~~~Gy~~v~~P~i~~ 55 (75)
-+|+-+.--|++|+..+ |.+.||..+..|=+.+
T Consensus 102 vDGsHI~~LLltff~r~~p~Li~~G~vyia~pPL~k 137 (242)
T 3m4i_A 102 VDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYK 137 (242)
T ss_dssp HHHHHHHHHHHHHHHHHCTHHHHTTCEEEECCCSEE
T ss_pred cccccchhHHHHHHHHHhHHHHhcCcEEEecCceEE
Confidence 37899999999999875 6789999877666655
No 98
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=26.95 E-value=37 Score=21.68 Aligned_cols=41 Identities=10% Similarity=0.001 Sum_probs=25.9
Q ss_pred CcceeecchH----HHHHHHHHHHHHHHHHhCCCeeeccCccchHH
Q psy10664 16 GRGYFLKGPA----VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKE 57 (75)
Q Consensus 16 ~~~~~l~~~g----a~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~ 57 (75)
+|..++..++ ..-..+|.. +++.++++||+.|..+.++...
T Consensus 148 ~g~IiL~Hd~~~~~~~t~~al~~-ii~~l~~~Gy~fvtl~ell~~~ 192 (216)
T 2c71_A 148 DGTIILLHDVQPEPHPTPEALDI-IIPTLKSRGYEFVTLTELFTLK 192 (216)
T ss_dssp TTBEEEEESCCSSSCCHHHHHHH-HHHHHHHTTCEECCHHHHHHHH
T ss_pred CCcEEEEECCCCChHHHHHHHHH-HHHHHHHCCCEEEEhHHhhcCc
Confidence 4445555443 223345544 5678899999999988776543
No 99
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=26.92 E-value=82 Score=17.42 Aligned_cols=38 Identities=8% Similarity=-0.004 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHhCCCeeeccCcc----chHHHHHHcCCCCC
Q psy10664 30 VGLVQYALSKWIEKGYTPLYTPFF----MRKEVMQEVAQLAQ 67 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~P~i----~~~~~~~~sG~~~~ 67 (75)
.+|.+.+.+...++|++.+..-.. -...++++.|+-..
T Consensus 92 ~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~ 133 (160)
T 3f8k_A 92 TLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKLGFKMR 133 (160)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHcCceEEEEEEcccCHHHHHHHHHcCCEEE
Confidence 444555555555678876554322 23457888887654
No 100
>1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A*
Probab=26.59 E-value=1e+02 Score=17.93 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHhCCCeeecc
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYT 50 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~ 50 (75)
+-.+|.+.+.+...+.|++.+..
T Consensus 87 iG~~ll~~~~~~~~~~g~~~i~l 109 (180)
T 1n71_A 87 IGTRLVNYLEKEVASRGGITIYL 109 (180)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHCCCcEEEE
Confidence 34455555555666678776654
No 101
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A
Probab=26.15 E-value=86 Score=20.50 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=23.1
Q ss_pred ccchhccCcc----eeecchHHHHHHHHHHHHHHHHHhCCCeeec
Q psy10664 9 AGAIVAGGRG----YFLKGPAVCLQVGLVQYALSKWIEKGYTPLY 49 (75)
Q Consensus 9 ~~~k~~G~~~----~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~ 49 (75)
.++|++|+|| ..+..+- .-.+.+.+.++++|++++.
T Consensus 286 ~~akltGAG~Ggc~ial~~~~-----~~~~~i~~~~~~~Gi~~~y 325 (335)
T 3gon_A 286 AVAKSSGAGGGDCGIALSFDA-----QSTKTLKNRWADLGIELLY 325 (335)
T ss_dssp EEEEECTTCSSSEEEEEECSH-----HHHHHHHHHHHHTTCEEEE
T ss_pred cEEEEccccchheEEEEECCH-----HHHHHHHHHHHHCCCcEEe
Confidence 4679999996 3444432 2235566677888988763
No 102
>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp}
Probab=25.39 E-value=97 Score=17.38 Aligned_cols=38 Identities=11% Similarity=0.071 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHhCCCeeeccC------ccchHHHHHHcCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTP------FFMRKEVMQEVAQLA 66 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P------~i~~~~~~~~sG~~~ 66 (75)
-.+|.+.+.+...++|++.+..= ..-...++++.|+-.
T Consensus 112 g~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~ 155 (177)
T 2r7h_A 112 GRALLAEVVHDVRLTGGRLLFAETSGIRKYAPTRRFYERAGFSA 155 (177)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEECSGGGHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEeccccccHHHHHHHHHcCCEe
Confidence 34555555555566788766542 234467899999754
No 103
>1k44_A Nucleoside diphosphate kinase; nucleoside triphosphate, transferase; 2.60A {Mycobacterium tuberculosis} SCOP: d.58.6.1
Probab=25.14 E-value=47 Score=20.28 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=25.1
Q ss_pred cceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCc
Q psy10664 17 RGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPF 52 (75)
Q Consensus 17 ~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~ 52 (75)
-+..++|+++. +.++.=+++.+.++||+.+..=.
T Consensus 5 Tl~iIKPdav~--~~~~g~Ii~~ie~~Gf~I~~~k~ 38 (136)
T 1k44_A 5 TLVLIKPDGIE--RQLIGEIISRIERKGLTIAALQL 38 (136)
T ss_dssp EEEEECHHHHH--TTCHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEChHHhh--cccHHHHHHHHHHCCCEEEEEEE
Confidence 36788899864 44556677888899999886543
No 104
>1ob8_A Holliday-junction resolvase; hydrolase, enzyme, homologous recombination, holliday junction resolving enzyme, nuclease, archaea; 1.8A {Sulfolobus solfataricus} SCOP: c.52.1.18 PDB: 1ob9_A
Probab=25.01 E-value=61 Score=19.90 Aligned_cols=19 Identities=16% Similarity=0.254 Sum_probs=14.3
Q ss_pred HHHHHHHHHhCCCeeeccC
Q psy10664 33 VQYALSKWIEKGYTPLYTP 51 (75)
Q Consensus 33 ~~f~~~~~~~~Gy~~v~~P 51 (75)
++-+.+.|.++||+.+..|
T Consensus 10 E~~A~~~L~~~G~~ilr~~ 28 (135)
T 1ob8_A 10 ERELVSILRGEGFNAVRIP 28 (135)
T ss_dssp HHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEc
Confidence 5556667788999999655
No 105
>3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1}
Probab=24.67 E-value=96 Score=17.10 Aligned_cols=38 Identities=11% Similarity=-0.055 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCc-cchHHHHHHcCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPF-FMRKEVMQEVAQLA 66 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~-i~~~~~~~~sG~~~ 66 (75)
-.+|.+.+.+...++|++.+.... --....|++.|+-+
T Consensus 89 g~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~Gf~~ 127 (147)
T 3efa_A 89 GRQLLTAAEEWATQRGFTHGEIHGELTAQRFYELCGYRV 127 (147)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeccHHHHHHHHHcCCcc
Confidence 445555556666677887665432 22356688888654
No 106
>2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1
Probab=23.72 E-value=75 Score=17.02 Aligned_cols=40 Identities=15% Similarity=-0.027 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHhCCCeeeccC-ccchHHHHHHcCCCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTP-FFMRKEVMQEVAQLAQF 68 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P-~i~~~~~~~~sG~~~~~ 68 (75)
-.+|.+.+.+...++|...+.++ ..-...++++.|+-+..
T Consensus 84 g~~ll~~~~~~~~~~~~~~l~~~~n~~a~~~y~k~Gf~~~~ 124 (138)
T 2atr_A 84 GSSLMKEALGNFKEAYQVQLATEETEKNVGFYRSMGFEILS 124 (138)
T ss_dssp HHHHHHHHHGGGTTCSEEECCCCCCHHHHHHHHHTTCCCGG
T ss_pred HHHHHHHHHHHHHhcCeEEEEeCCChHHHHHHHHcCCcccc
Confidence 34555555555566787666554 34455679999976543
No 107
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=23.64 E-value=35 Score=23.03 Aligned_cols=33 Identities=12% Similarity=0.090 Sum_probs=22.6
Q ss_pred ecchHHHHHHHHHHHHHHHHHhCCCeeecc-CccchHHH
Q psy10664 21 LKGPAVCLQVGLVQYALSKWIEKGYTPLYT-PFFMRKEV 58 (75)
Q Consensus 21 l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~-P~i~~~~~ 58 (75)
.=|+|-.=+..+ +.+.+.||++|+- |-|+|.|+
T Consensus 205 IGPEGGfs~~Ei-----~~~~~~G~~~vsLG~rILRtET 238 (268)
T 1vhk_A 205 FGPEGGLTEAEV-----ERLTEQDGVTCGLGPRILRTET 238 (268)
T ss_dssp ECCTTCCCHHHH-----HHHHHTTCEEECCCSSCCCTTT
T ss_pred EcCCCCCCHHHH-----HHHHHCCCEEecCCCCeeehHH
Confidence 344454444443 3456789999976 99999887
No 108
>2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10
Probab=23.57 E-value=95 Score=20.96 Aligned_cols=41 Identities=12% Similarity=0.212 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHhCCCeeec-cCccchHHHHHHcCCCCCCcc
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLY-TPFFMRKEVMQEVAQLAQFDE 70 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~-~P~i~~~~~~~~sG~~~~~~e 70 (75)
+-.+|.+.+++.+.++|+..+. .|. ....|++.|+-+..+.
T Consensus 95 ig~~Ll~~~~~~~~~~g~~~~~L~~~--~~~~Y~~~GF~~~~~~ 136 (400)
T 2hv2_A 95 GISAIMKEMLADLAKQKVALSYLAPF--SYPFYRQYGYEQTFEQ 136 (400)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHTTTCEECCEE
T ss_pred HHHHHHHHHHHHHHHcCceEEEEecC--CHhHHHhcCCEEeceE
Confidence 4567777888888888887665 553 3788999997655443
No 109
>3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=23.55 E-value=59 Score=22.77 Aligned_cols=26 Identities=19% Similarity=0.084 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHhCCCeeeccCccch
Q psy10664 30 VGLVQYALSKWIEKGYTPLYTPFFMR 55 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~P~i~~ 55 (75)
..+.+-+++.+...||+++.+|.+..
T Consensus 110 ~~~~~~Ir~if~~~Gf~ev~~~~ve~ 135 (327)
T 3pco_A 110 TRTIDRIESFFGELGFTVATGPEIED 135 (327)
T ss_dssp HHHHHHHHHHHHTTTCBCCCCCSEEC
T ss_pred HHHHHHHHHHHHHCCCeEEECCCccC
Confidence 44555566667788999999998753
No 110
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii}
Probab=23.52 E-value=69 Score=24.25 Aligned_cols=35 Identities=6% Similarity=0.280 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhCCCeeeccCccchHHH-HHHcCC
Q psy10664 30 VGLVQYALSKWIEKGYTPLYTPFFMRKEV-MQEVAQ 64 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~-~~~sG~ 64 (75)
..+++-+++.+..-||+++.+|.+....- +...||
T Consensus 60 ~~~~~~ir~~f~~mGF~e~~~p~ies~~~n~pq~gh 95 (549)
T 2du7_A 60 METIERLRQAYLRMGFEEMINPVIVDEMEIYKQFGP 95 (549)
T ss_dssp HHHHHHHHHHHHTTTCEECCCCSCEEHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHCCCEEeeCCeEeehHHhCCCcCC
Confidence 34555566677788999999999976543 455555
No 111
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B*
Probab=23.49 E-value=56 Score=25.53 Aligned_cols=32 Identities=22% Similarity=0.144 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCccchHHHHH
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQ 60 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~ 60 (75)
.+.+.+-+++.+...||+++.|-.++..+.++
T Consensus 491 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~ 522 (785)
T 1b7y_B 491 PYRKEQRLREVLSGLGFQEVYTYSFMDPEDAR 522 (785)
T ss_dssp HHHHHHHHHHHHHHHTCEECCCCSEECTTHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEecCcccCHHHHH
Confidence 56677788888899999999999999987664
No 112
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}
Probab=23.45 E-value=1.1e+02 Score=17.21 Aligned_cols=38 Identities=8% Similarity=-0.090 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCc----cchHHHHHHcCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPF----FMRKEVMQEVAQLA 66 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~----i~~~~~~~~sG~~~ 66 (75)
-.+|.+.+.+...++|++.+..=. .-...+|++.|+-.
T Consensus 121 g~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~ 162 (179)
T 2oh1_A 121 SKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQF 162 (179)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEecCCcHHHHHHHHHCCCEE
Confidence 445555555555667887665322 22456788888643
No 113
>2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10
Probab=23.08 E-value=78 Score=21.50 Aligned_cols=39 Identities=15% Similarity=0.041 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHhCCCee-eccCccchHHHHHHcCCCCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTP-LYTPFFMRKEVMQEVAQLAQF 68 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~-v~~P~i~~~~~~~~sG~~~~~ 68 (75)
+-++|.+.+++.+.++|+.. +..|. ....|++.|+-+..
T Consensus 108 ig~~Ll~~~l~~~~~~g~~~~~L~~~--~~~fY~r~GF~~~~ 147 (406)
T 2i00_A 108 LMKDLIQTALEEMRQDKQWISYLFPY--NIPYYRRKGWEIMS 147 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECCS--CHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEcc--ChhhhhccCceEcc
Confidence 55677777788888888876 33554 57889999965443
No 114
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*
Probab=22.90 E-value=1e+02 Score=16.88 Aligned_cols=39 Identities=8% Similarity=-0.032 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHhCCCeeecc----CccchHHHHHHcCCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYT----PFFMRKEVMQEVAQLA 66 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~----P~i~~~~~~~~sG~~~ 66 (75)
+-.+|.+.+.+.+.+.|+..+.. .......++++.|+-+
T Consensus 99 ig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~ 141 (174)
T 3dr6_A 99 LGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFTV 141 (174)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhCCCEE
Confidence 34555666666666778876543 2233456799998654
No 115
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=22.81 E-value=1.1e+02 Score=16.91 Aligned_cols=38 Identities=8% Similarity=-0.087 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCc----cchHHHHHHcCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPF----FMRKEVMQEVAQLA 66 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~----i~~~~~~~~sG~~~ 66 (75)
-.+|.+.+.+...++|++.+..-. .-...+|++.|+-+
T Consensus 92 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~~ 133 (162)
T 3lod_A 92 GEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQT 133 (162)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCCEE
Confidence 345555555555667888665422 22456788888654
No 116
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=22.79 E-value=65 Score=21.40 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=24.8
Q ss_pred eeecchHHHHHHHHHHHHHHHHHhCCCeeec-cCccchHHHH
Q psy10664 19 YFLKGPAVCLQVGLVQYALSKWIEKGYTPLY-TPFFMRKEVM 59 (75)
Q Consensus 19 ~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~-~P~i~~~~~~ 59 (75)
.+.=|+|-.=+..+ +.+.+.||++|+ -|-|+|.|+.
T Consensus 191 l~IGPEGGfs~~Ei-----~~~~~~Gf~~vsLG~rILRtETA 227 (251)
T 4e8b_A 191 LLIGPEGGLSADEI-----AMTARYQFTDILLGPRVLRTETT 227 (251)
T ss_dssp EEECCTTCCCHHHH-----HHHHHTTCEEEBCCSSCCCHHHH
T ss_pred EEECCCCCCCHHHH-----HHHHHCCCEEecCCCCceeHHHH
Confidence 34445565555554 345788999987 5999999973
No 117
>2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1
Probab=22.55 E-value=1.2e+02 Score=17.58 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHhCCCeeecc--CccchHHH-HHHcCCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYT--PFFMRKEV-MQEVAQLA 66 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~--P~i~~~~~-~~~sG~~~ 66 (75)
+-.+|.+.+.+...++|++.+.. ...-...+ +++.|+-.
T Consensus 123 ig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~~~~y~k~GF~~ 164 (190)
T 2gan_A 123 IGSTLLEFAVKRLRSLGKDPYVVTFPNLEAYSYYYMKKGFRE 164 (190)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECGGGSHHHHHHHTTTEEE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEecCCccccccEEecCCCEE
Confidence 44555555555556678877654 33445677 89988643
No 118
>2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A*
Probab=22.53 E-value=1.2e+02 Score=17.57 Aligned_cols=41 Identities=5% Similarity=-0.272 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHhCCCeeecc-CccchHHHHHHcCCCCCCc
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYT-PFFMRKEVMQEVAQLAQFD 69 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~-P~i~~~~~~~~sG~~~~~~ 69 (75)
-.+|.+.+.+...++|++.+.. -.--+..+|++.|+-....
T Consensus 143 g~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~ 184 (190)
T 2vez_A 143 GLRIIQALDYVAEKVGCYKTILDCSEANEGFYIKCGFKRAGL 184 (190)
T ss_dssp HHHHHHHHHHHHHHHTCSEEECCCCGGGHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEeccchHHHHHHCCCeehHH
Confidence 3445555555555568776543 2334568999999765443
No 119
>1hh1_A Holliday junction resolving enzyme HJC; holliday junction resolvase, homologous recombination, nuclease domain, archaea; 2.15A {Sulfolobus solfataricus} SCOP: c.52.1.18
Probab=22.52 E-value=73 Score=19.70 Aligned_cols=20 Identities=20% Similarity=0.389 Sum_probs=14.5
Q ss_pred HHHHHHHHHhCCCeeeccCc
Q psy10664 33 VQYALSKWIEKGYTPLYTPF 52 (75)
Q Consensus 33 ~~f~~~~~~~~Gy~~v~~P~ 52 (75)
++-+.+.|.++||+.+..|.
T Consensus 12 E~~a~~~L~~~G~~ilr~~~ 31 (143)
T 1hh1_A 12 ERNIVSRLRDKGFAVVRAPA 31 (143)
T ss_dssp HHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHCCCEEEEEcC
Confidence 45566667789999997543
No 120
>3k9f_C DNA topoisomerase 4 subunit B; quinolone, topoisomerase, protein-DNA cleavage complex; HET: DNA LFX; 2.90A {Streptococcus pneumoniae} PDB: 3fof_C* 3foe_C* 3ksa_C* 3ksb_C* 3ltn_C* 3rad_C* 3rae_C* 3raf_C*
Probab=22.44 E-value=95 Score=21.49 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=26.7
Q ss_pred chHHHHHHHHHHHHHHH---HHhCCCeeeccCccchH
Q psy10664 23 GPAVCLQVGLVQYALSK---WIEKGYTPLYTPFFMRK 56 (75)
Q Consensus 23 ~~ga~L~~aL~~f~~~~---~~~~Gy~~v~~P~i~~~ 56 (75)
-+|+-+.-.|++|+..+ |.+.||..+..|=+++-
T Consensus 130 vDGsHI~~LLltff~r~~p~Li~~G~vyia~pPLykv 166 (268)
T 3k9f_C 130 TDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKM 166 (268)
T ss_dssp HHHHHHHHHHHHHHHHTSHHHHHTTCEEEECCCSEEE
T ss_pred cccccchhHHHHHHHHHhHHHHhCCcEEEecCCeEEE
Confidence 37899999999999864 67899998776666553
No 121
>2eo0_A Hypothetical protein ST1444; holliday junction resolvase, DNA binding protein, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=22.42 E-value=70 Score=19.84 Aligned_cols=19 Identities=26% Similarity=0.628 Sum_probs=13.4
Q ss_pred HHHHHHHHHhCCCeeeccC
Q psy10664 33 VQYALSKWIEKGYTPLYTP 51 (75)
Q Consensus 33 ~~f~~~~~~~~Gy~~v~~P 51 (75)
++-+.+.|.++||+.+..|
T Consensus 15 E~~a~~~L~~~G~~ilr~~ 33 (147)
T 2eo0_A 15 ERYIVSRLRDKGFAVIRAP 33 (147)
T ss_dssp HHHHHHHHHHTTCEEECC-
T ss_pred HHHHHHHHHHCCCEEEEEc
Confidence 4555666778899999765
No 122
>12as_A Asparagine synthetase; ligase, nitrogen fixation; HET: AMP; 2.20A {Escherichia coli K12} SCOP: d.104.1.1 PDB: 11as_A*
Probab=22.06 E-value=43 Score=23.92 Aligned_cols=30 Identities=10% Similarity=0.045 Sum_probs=20.0
Q ss_pred HHHHHHHH-hCCCeeeccCccchHHHHHHcCCCCC
Q psy10664 34 QYALSKWI-EKGYTPLYTPFFMRKEVMQEVAQLAQ 67 (75)
Q Consensus 34 ~f~~~~~~-~~Gy~~v~~P~i~~~~~~~~sG~~~~ 67 (75)
+|+...+. +.|++.|++|.++... +|..++
T Consensus 17 ~~f~~~l~~~L~L~rVsaPlfv~~~----~GlnD~ 47 (330)
T 12as_A 17 SHFSRQLEERLGLIEVQAPILSRVG----DGTQDN 47 (330)
T ss_dssp HHHHHHHHHHHCEEECCCCSEEETT----SSCSCC
T ss_pred HHHHHHHHHhcCcEEecCCEEecCC----CCCCCC
Confidence 34433332 7799999999999863 454444
No 123
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=21.52 E-value=1.1e+02 Score=16.75 Aligned_cols=40 Identities=10% Similarity=-0.059 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHhCCCeeecc----CccchHHHHHHcCCCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYT----PFFMRKEVMQEVAQLAQ 67 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~----P~i~~~~~~~~sG~~~~ 67 (75)
+-.+|.+.+.+...+.|++.+.. -..-...++++.|+-+.
T Consensus 105 ig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~ 148 (166)
T 2fe7_A 105 AGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQ 148 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEccCCHHHHHHHHHcCCeEc
Confidence 44566666666666778876642 22234567999997543
No 124
>1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1
Probab=21.25 E-value=1.2e+02 Score=16.91 Aligned_cols=40 Identities=13% Similarity=-0.042 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHhCCCeeeccCccc----hHHHHHHcCCCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYTPFFM----RKEVMQEVAQLAQ 67 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~P~i~----~~~~~~~sG~~~~ 67 (75)
+-.+|.+.+.+...+.|++.+..-..- ...++++.|+-+.
T Consensus 78 ig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~ 121 (157)
T 1y9k_A 78 IGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIF 121 (157)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEeCCCCHHHHHHHHHCCCEEe
Confidence 344555555555566787755432222 3567888886543
No 125
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=21.17 E-value=1.3e+02 Score=17.35 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHhCCCeeecc----C-ccchHHHHHHcCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYT----P-FFMRKEVMQEVAQL 65 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~----P-~i~~~~~~~~sG~~ 65 (75)
+-.+|.+.+.+..+++|++.+.. + .--...+|++.|+-
T Consensus 105 iG~~Ll~~~~~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~GF~ 147 (173)
T 4h89_A 105 VGRALCQDMIDWAGREGFRAIQFNAVVETNTVAVKLWQSLGFR 147 (173)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEETTCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHCCCcEEEEeeecccCHHHHHHHHHCCCE
Confidence 34555666666667889876532 1 23334579999864
No 126
>1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1
Probab=21.14 E-value=1.3e+02 Score=17.28 Aligned_cols=39 Identities=15% Similarity=-0.031 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhCCCeeeccCccc----hHHHHHHcCCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYTPFFM----RKEVMQEVAQLA 66 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~P~i~----~~~~~~~sG~~~ 66 (75)
+-.+|.+.+.+...+.|++.+..-..- ....+++.|+-.
T Consensus 80 ig~~Ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~ 122 (163)
T 1yvk_A 80 FGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQKCGFRI 122 (163)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEcCCCCHHHHHHHHHCCCEE
Confidence 334555555555566787766543322 246788888654
No 127
>1xmt_A Putative acetyltransferase; structural genomics, protein structure initiative, CESG, AT1G77540, center for eukaryotic structural genomics; 1.15A {Arabidopsis thaliana} SCOP: d.108.1.1 PDB: 2q44_A 2evn_A 2il4_A* 2q4y_A*
Probab=20.66 E-value=1.2e+02 Score=16.85 Aligned_cols=36 Identities=8% Similarity=0.042 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHhCCCeeeccCccchHHHHHHcC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYTPFFMRKEVMQEVA 63 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~~~~~sG 63 (75)
+-.+|.+.+.+..+++|++.+..=..+....+++..
T Consensus 53 iG~~Ll~~~~~~a~~~g~~~i~l~~~~~~~f~~k~~ 88 (103)
T 1xmt_A 53 LASHLCVAAFEHASSHSISIIPSCSYVSDTFLPRNP 88 (103)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEECSHHHHHTHHHHCG
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEehhhhHHHHHhCh
Confidence 446677777777788999987652222222555543
No 128
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=20.62 E-value=62 Score=23.38 Aligned_cols=41 Identities=15% Similarity=0.131 Sum_probs=27.3
Q ss_pred CcceeecchH-HHHHHHHHHHHHHHHHhCCCeeeccCccchHH
Q psy10664 16 GRGYFLKGPA-VCLQVGLVQYALSKWIEKGYTPLYTPFFMRKE 57 (75)
Q Consensus 16 ~~~~~l~~~g-a~L~~aL~~f~~~~~~~~Gy~~v~~P~i~~~~ 57 (75)
+|..+++.++ ..-..||.. +++.+.++||+.|..+.++...
T Consensus 378 ~G~IIL~HD~~~~tv~aL~~-iI~~Lk~~Gy~fvtl~ell~~~ 419 (431)
T 2c1i_A 378 NGSIVLMHDIHSPTVNALPR-VIEYLKNQGYTFVTIPEMLNTR 419 (431)
T ss_dssp TTEEEEEETTSHHHHHHHHH-HHHHHHHTTCEECCHHHHHGGG
T ss_pred CCCEEEECCCchHHHHHHHH-HHHHHHHCCCEEEEHHHHhcCC
Confidence 4445555444 344456544 6778889999999998877643
No 129
>3fov_A UPF0102 protein RPA0323; structural genomics, APC7380, PSI-2, protein structure initi midwest center for structural genomics, MCSG; 1.88A {Rhodopseudomonas palustris}
Probab=20.52 E-value=76 Score=19.46 Aligned_cols=17 Identities=24% Similarity=0.149 Sum_probs=14.0
Q ss_pred HHHHHHHHHhCCCeeec
Q psy10664 33 VQYALSKWIEKGYTPLY 49 (75)
Q Consensus 33 ~~f~~~~~~~~Gy~~v~ 49 (75)
++.+.++|.++||+.+-
T Consensus 27 E~~A~~~L~~~Gy~Il~ 43 (134)
T 3fov_A 27 EASAADYLERQGYRILA 43 (134)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCEEEe
Confidence 67788889999999763
No 130
>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V}
Probab=20.51 E-value=1.4e+02 Score=17.28 Aligned_cols=37 Identities=5% Similarity=-0.170 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhCCCeeeccCcc----chHHHHHHcCCCC
Q psy10664 30 VGLVQYALSKWIEKGYTPLYTPFF----MRKEVMQEVAQLA 66 (75)
Q Consensus 30 ~aL~~f~~~~~~~~Gy~~v~~P~i----~~~~~~~~sG~~~ 66 (75)
.+|.+.+.+...+.|++.|..=.. -...++++.|+-.
T Consensus 116 ~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~ 156 (181)
T 2q7b_A 116 RKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQ 156 (181)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHCCCEE
Confidence 344444444455578776554222 2357889988654
No 131
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=20.47 E-value=1.2e+02 Score=16.53 Aligned_cols=39 Identities=8% Similarity=-0.022 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHhCCCeeeccCc----cchHHHHHHcCCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYTPF----FMRKEVMQEVAQLA 66 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~P~----i~~~~~~~~sG~~~ 66 (75)
+-.+|.+.+.+...+.|++.+..=. .-...++++.|+-+
T Consensus 92 ig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~ 134 (162)
T 2fia_A 92 YGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTK 134 (162)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCEE
Confidence 3345555555555667886554322 34456788888654
No 132
>1wkj_A Nucleoside diphosphate kinase; thermus thermophilus HB8, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: d.58.6.1 PDB: 1wkk_A* 1wkl_A*
Probab=20.38 E-value=53 Score=20.05 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=24.0
Q ss_pred ceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCc
Q psy10664 18 GYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPF 52 (75)
Q Consensus 18 ~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~ 52 (75)
+..++|+++. +.++.=+++.+.++||+.+..=.
T Consensus 5 l~iIKPdav~--~~~~g~Ii~~ie~~Gf~I~~~k~ 37 (137)
T 1wkj_A 5 FVMIKPDGVR--RGLVGEILARFERKGFRIAALKL 37 (137)
T ss_dssp EEEECHHHHH--TTCHHHHHHHHHHHTCEEEEEEE
T ss_pred EEEEChHHhh--cccHHHHHHHHHHCCCEEEEEEE
Confidence 6778888864 44556677788889999876543
No 133
>1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A*
Probab=20.16 E-value=1.2e+02 Score=16.71 Aligned_cols=38 Identities=8% Similarity=-0.109 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhCCCeeeccCcc---chHHHHHHcCCCC
Q psy10664 29 QVGLVQYALSKWIEKGYTPLYTPFF---MRKEVMQEVAQLA 66 (75)
Q Consensus 29 ~~aL~~f~~~~~~~~Gy~~v~~P~i---~~~~~~~~sG~~~ 66 (75)
-.+|.+.+.+.+.+.|++.+..=.. -...++++.|+-.
T Consensus 108 g~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~Gf~~ 148 (177)
T 1ghe_A 108 GRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTR 148 (177)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeccCCHHHHHHHHcCCEE
Confidence 3455555555555677766543221 2557789988654
No 134
>2hur_A NDK, nucleoside diphosphate kinase, NDP kinase; type II tetramer, signaling protein,transferase; 1.62A {Escherichia coli}
Probab=20.12 E-value=67 Score=19.72 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=24.6
Q ss_pred cceeecchHHHHHHHHHHHHHHHHHhCCCeeeccCc
Q psy10664 17 RGYFLKGPAVCLQVGLVQYALSKWIEKGYTPLYTPF 52 (75)
Q Consensus 17 ~~~~l~~~ga~L~~aL~~f~~~~~~~~Gy~~v~~P~ 52 (75)
-+..++|+++. +.++.=+++.+.++||+.+..=.
T Consensus 5 Tl~iIKPdav~--~~~~g~Ii~~ie~~Gf~I~~~k~ 38 (142)
T 2hur_A 5 TFSIIKPNAVA--KNVIGNIFARFEAAGFKIVGTKM 38 (142)
T ss_dssp EEEEECHHHHH--TTCHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEChHHHh--cccHHHHHHHHHHCCCEEEEEEE
Confidence 36788898874 44455677788899999886533
No 135
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=20.11 E-value=92 Score=24.19 Aligned_cols=34 Identities=6% Similarity=0.271 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHhCCCeeeccCccchHHH-HHHcCC
Q psy10664 31 GLVQYALSKWIEKGYTPLYTPFFMRKEV-MQEVAQ 64 (75)
Q Consensus 31 aL~~f~~~~~~~~Gy~~v~~P~i~~~~~-~~~sG~ 64 (75)
.+++-+++....-||+++.+|.+....- +..-||
T Consensus 69 ~~~~~IR~if~~mGF~E~~~p~vese~~n~pq~gH 103 (648)
T 2odr_B 69 DTIENLRQAYLRMGFEEYINPVIVDERDIYKQFGP 103 (648)
T ss_dssp HHHHHHHHHHHHTTCEECCCCSEEEHHHHHHHHGG
T ss_pred HHHHHHHHHHHHCCCEEeeCCEEeehhhhCCCcCC
Confidence 3455566666778999999999975443 344444
No 136
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=20.00 E-value=1.1e+02 Score=18.09 Aligned_cols=38 Identities=8% Similarity=-0.130 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHhCCCeeeccC----ccchHHHHHHcCCC
Q psy10664 28 LQVGLVQYALSKWIEKGYTPLYTP----FFMRKEVMQEVAQL 65 (75)
Q Consensus 28 L~~aL~~f~~~~~~~~Gy~~v~~P----~i~~~~~~~~sG~~ 65 (75)
+-.+|.+.+.+..+++|++.+..= .--...+|++.|+-
T Consensus 129 iG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~ 170 (199)
T 1u6m_A 129 IGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFK 170 (199)
T ss_dssp HHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCE
Confidence 456677777777778898655322 22345778888854
Done!