Your job contains 1 sequence.
>psy10666
MNRAEMSSDEEGKYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVY
TGLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAETIEDLKLLTKVLLE
ETSKWRIKHNREIRDLYNEPDVVGEIKSGRLRWAGHVQRREEDSNIRSIWEHQPEGRRPR
GRPKNRWKDQVRKDMTILNLTTEDSFNRALWRQKVGEAKYLLGNYLLLKMSGLRQVSADM
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10666
(240 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|G3V5L0 - symbol:SHMT2 "Serine hydroxymethyltran... 202 2.1e-32 2
FB|FBgn0029823 - symbol:CG3011 species:7227 "Drosophila m... 208 6.4e-32 2
UNIPROTKB|Q3SZ20 - symbol:SHMT2 "Serine hydroxymethyltran... 198 3.0e-31 2
RGD|1308582 - symbol:Shmt2 "serine hydroxymethyltransfera... 198 6.1e-31 2
UNIPROTKB|F1SL74 - symbol:LOC100626911 "Serine hydroxymet... 198 7.8e-31 2
UNIPROTKB|P34897 - symbol:SHMT2 "Serine hydroxymethyltran... 202 9.5e-31 2
UNIPROTKB|E2R4L7 - symbol:SHMT2 "Uncharacterized protein"... 198 1.2e-30 2
UNIPROTKB|P14519 - symbol:SHMT2 "Serine hydroxymethyltran... 198 2.0e-30 2
ZFIN|ZDB-GENE-071213-1 - symbol:shmt2 "serine hydroxymeth... 194 9.2e-29 2
UNIPROTKB|Q60V73 - symbol:mel-32 "Serine hydroxymethyltra... 195 3.5e-28 2
DICTYBASE|DDB_G0291652 - symbol:shmt2 "serine hydroxymeth... 187 8.8e-27 2
POMBASE|SPAC24C9.12c - symbol:SPAC24C9.12c "glycine hydro... 180 1.5e-25 2
SGD|S000004048 - symbol:SHM2 "Cytosolic serine hydroxymet... 173 9.0e-25 2
UNIPROTKB|G4NDG3 - symbol:MGG_00923 "Serine hydroxymethyl... 167 2.4e-23 2
POMBASE|SPAC18G6.04c - symbol:shm2 "serine hydroxymethylt... 173 4.9e-23 2
UNIPROTKB|G3V4W5 - symbol:SHMT2 "Serine hydroxymethyltran... 202 8.8e-23 2
UNIPROTKB|G3V540 - symbol:SHMT2 "Serine hydroxymethyltran... 202 8.8e-23 2
UNIPROTKB|G4MRB4 - symbol:MGG_13781 "Serine hydroxymethyl... 168 2.1e-22 2
UNIPROTKB|J3KRZ5 - symbol:SHMT1 "Serine hydroxymethyltran... 204 1.9e-19 2
SGD|S000000467 - symbol:SHM1 "Mitochondrial serine hydrox... 160 6.2e-19 2
MGI|MGI:98299 - symbol:Shmt1 "serine hydroxymethyltransfe... 211 1.8e-16 1
UNIPROTKB|E2RIV3 - symbol:SHMT1 "Uncharacterized protein"... 210 2.5e-16 1
UNIPROTKB|G3V241 - symbol:SHMT2 "Serine hydroxymethyltran... 202 2.9e-16 1
UNIPROTKB|G3V2E4 - symbol:SHMT2 "Serine hydroxymethyltran... 202 2.9e-16 1
UNIPROTKB|G3V2W0 - symbol:SHMT2 "Serine hydroxymethyltran... 202 2.9e-16 1
UNIPROTKB|G3V3Y8 - symbol:SHMT2 "Serine hydroxymethyltran... 202 2.9e-16 1
UNIPROTKB|G3V4T0 - symbol:SHMT2 "Serine hydroxymethyltran... 202 2.9e-16 1
UNIPROTKB|G3V4X0 - symbol:SHMT2 "Serine hydroxymethyltran... 202 2.9e-16 1
UNIPROTKB|E1BS67 - symbol:SHMT1 "Uncharacterized protein"... 209 3.2e-16 1
UNIPROTKB|A8MYA6 - symbol:SHMT1 "Serine hydroxymethyltran... 205 7.0e-16 1
UNIPROTKB|P34896 - symbol:SHMT1 "Serine hydroxymethyltran... 205 8.6e-16 1
RGD|1312011 - symbol:Shmt1 "serine hydroxymethyltransfera... 206 1.3e-15 1
DICTYBASE|DDB_G0277947 - symbol:shmt1 "serine hydroxymeth... 201 2.0e-15 1
ZFIN|ZDB-GENE-040426-1558 - symbol:shmt1 "serine hydroxym... 201 2.6e-15 1
WB|WBGene00003214 - symbol:mel-32 species:6239 "Caenorhab... 201 2.6e-15 1
UNIPROTKB|P50432 - symbol:mel-32 "Serine hydroxymethyltra... 201 2.6e-15 1
TAIR|locus:2119545 - symbol:EDA36 "EMBRYO SAC DEVELOPMENT... 200 2.8e-15 1
TAIR|locus:2129251 - symbol:SHM4 "serine hydroxymethyltra... 199 3.6e-15 1
UNIPROTKB|Q5E9P9 - symbol:SHMT1 "Serine hydroxymethyltran... 197 6.4e-15 1
TAIR|locus:2005518 - symbol:SHM1 "serine transhydroxymeth... 196 9.4e-15 1
TAIR|locus:2127806 - symbol:SHM3 "serine hydroxymethyltra... 189 5.6e-14 1
GENEDB_PFALCIPARUM|PFL1720w - symbol:PFL1720w "Serine hyd... 151 1.9e-13 2
UNIPROTKB|Q8I566 - symbol:PFL1720w "Serine hydroxymethylt... 151 1.9e-13 2
TAIR|locus:2148463 - symbol:SHM2 "serine hydroxymethyltra... 184 2.0e-13 1
TAIR|locus:2030581 - symbol:SHM6 "serine hydroxymethyltra... 183 3.1e-13 1
UNIPROTKB|I3LGT5 - symbol:I3LGT5 "Serine hydroxymethyltra... 173 3.4e-13 1
ASPGD|ASPL0000040474 - symbol:AN3058 species:162425 "Emer... 178 7.0e-13 1
UNIPROTKB|G3V2Y4 - symbol:SHMT2 "Serine hydroxymethyltran... 168 1.2e-12 1
CGD|CAL0003822 - symbol:SHM1 species:5476 "Candida albica... 175 1.6e-12 1
UNIPROTKB|Q59PP7 - symbol:SHM1 "Putative uncharacterized ... 175 1.6e-12 1
CGD|CAL0001464 - symbol:SHM2 species:5476 "Candida albica... 172 3.1e-12 1
UNIPROTKB|O13426 - symbol:SHM2 "Serine hydroxymethyltrans... 172 3.1e-12 1
TAIR|locus:2035937 - symbol:SHM7 "serine hydroxymethyltra... 172 4.8e-12 1
UNIPROTKB|B4DPM9 - symbol:SHMT1 "Serine hydroxymethyltran... 167 5.2e-12 1
ASPGD|ASPL0000008876 - symbol:AN10745 species:162425 "Eme... 168 1.3e-11 1
TIGR_CMR|CJE_0451 - symbol:CJE_0451 "serine hydroxymethyl... 112 1.6e-08 2
UNIPROTKB|P0A825 - symbol:glyA species:83333 "Escherichia... 117 2.2e-07 2
TIGR_CMR|GSU_1607 - symbol:GSU_1607 "serine hydroxymethyl... 100 4.8e-06 2
TIGR_CMR|SO_3471 - symbol:SO_3471 "serine hydroxymethyltr... 101 2.0e-05 2
TIGR_CMR|CHY_2557 - symbol:CHY_2557 "serine hydroxymethyl... 102 2.4e-05 2
TIGR_CMR|CBU_1419 - symbol:CBU_1419 "serine hydroxymethyl... 93 4.1e-05 2
TIGR_CMR|BA_5558 - symbol:BA_5558 "serine hydroxymethyltr... 95 4.8e-05 2
TIGR_CMR|DET_0436 - symbol:DET_0436 "Serine hydroxymethyl... 84 8.9e-05 2
UNIPROTKB|O53441 - symbol:glyA1 "Serine hydroxymethyltran... 86 0.00046 2
TIGR_CMR|SPO_1572 - symbol:SPO_1572 "serine hydroxymethyl... 85 0.00048 2
TIGR_CMR|SPO_2940 - symbol:SPO_2940 "serine hydroxymethyl... 85 0.00048 2
TIGR_CMR|NSE_0218 - symbol:NSE_0218 "serine hydroxymethyl... 89 0.00050 2
TIGR_CMR|APH_0154 - symbol:APH_0154 "serine hydroxymethyl... 78 0.00074 2
TIGR_CMR|ECH_0311 - symbol:ECH_0311 "serine hydroxymethyl... 78 0.00090 2
>UNIPROTKB|G3V5L0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V5L0 SMR:G3V5L0 Ensembl:ENST00000554975
ArrayExpress:G3V5L0 Bgee:G3V5L0 Uniprot:G3V5L0
Length = 215
Score = 202 (76.2 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AVYT L
Sbjct: 83 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 133
Score = 168 (64.2 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 33/44 (75%), Positives = 41/44 (93%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
+ISATSIFFES+PYK+N +TGLIDY++LA +ARLF+PRLIIA T
Sbjct: 161 RISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGT 204
>FB|FBgn0029823 [details] [associations]
symbol:CG3011 species:7227 "Drosophila melanogaster"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006564 "L-serine biosynthetic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0048149 "behavioral response
to ethanol" evidence=IMP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014298 GO:GO:0048149
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 HSSP:P07511
OMA:VDLRESH UniGene:Dm.11053 GeneID:31524 KEGG:dme:Dmel_CG3011
FlyBase:FBgn0029823 GenomeRNAi:31524 NextBio:774055 EMBL:BT011432
RefSeq:NP_572278.1 SMR:Q9W457 IntAct:Q9W457 MINT:MINT-313386
STRING:Q9W457 EnsemblMetazoa:FBtr0070827 UCSC:CG3011-RA
InParanoid:Q9W457 Uniprot:Q9W457
Length = 537
Score = 208 (78.3 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGGN++ID IE++AQQR + FNLD E+WG NVQPYSGSPAN AVYTG+
Sbjct: 136 RYYGGNEYIDRIELLAQQRGRELFNLDDEKWGVNVQPYSGSPANLAVYTGV 186
Score = 174 (66.3 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 33/42 (78%), Positives = 40/42 (95%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
KISATSIFFES+PYKVN ETG+IDYDKLAE+A+ F+P++IIA
Sbjct: 214 KISATSIFFESMPYKVNPETGIIDYDKLAEAAKNFRPQIIIA 255
>UNIPROTKB|Q3SZ20 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9913 "Bos taurus" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743 GO:GO:0003682
GO:GO:0042645 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 EMBL:BC103242
IPI:IPI00718654 RefSeq:NP_001029454.1 UniGene:Bt.49106
ProteinModelPortal:Q3SZ20 SMR:Q3SZ20 STRING:Q3SZ20 PRIDE:Q3SZ20
Ensembl:ENSBTAT00000038244 GeneID:507197 KEGG:bta:507197 CTD:6472
InParanoid:Q3SZ20 OrthoDB:EOG4G4GQ7 NextBio:20867950 Uniprot:Q3SZ20
Length = 504
Score = 198 (74.8 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A YT L
Sbjct: 104 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTAL 154
Score = 177 (67.4 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 35/44 (79%), Positives = 41/44 (93%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
+ISATSIFFES+PYK+N +TGLIDYD+LA +ARLFKPRLIIA T
Sbjct: 182 RISATSIFFESMPYKLNPQTGLIDYDQLALTARLFKPRLIIAGT 225
>RGD|1308582 [details] [associations]
symbol:Shmt2 "serine hydroxymethyltransferase 2 (mitochondrial)"
species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO;IDA;TAS] [GO:0005739 "mitochondrion"
evidence=ISO;IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO;IDA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=ISO;IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA;TAS]
[GO:0006545 "glycine biosynthetic process" evidence=IDA]
[GO:0006563 "L-serine metabolic process" evidence=TAS] [GO:0006564
"L-serine biosynthetic process" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=ISO] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IDA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA;ISO] [GO:0016597 "amino
acid binding" evidence=IPI] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 RGD:1308582
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743
GO:GO:0005758 GO:GO:0005759 GO:GO:0008284 GO:GO:0003682
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0042645
GO:GO:0008168 GO:GO:0035999 GO:GO:0006564 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 CTD:6472
OrthoDB:EOG4G4GQ7 EMBL:BC085331 IPI:IPI00195109
RefSeq:NP_001008323.1 UniGene:Rn.9214 SMR:Q5U3Z7 IntAct:Q5U3Z7
STRING:Q5U3Z7 Ensembl:ENSRNOT00000011082 GeneID:299857
KEGG:rno:299857 InParanoid:Q5U3Z7 NextBio:645904
Genevestigator:Q5U3Z7 Uniprot:Q5U3Z7
Length = 504
Score = 198 (74.8 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A YT L
Sbjct: 104 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTAL 154
Score = 174 (66.3 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 34/44 (77%), Positives = 41/44 (93%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
+ISATSIFFES+PYK+N +TGLIDYD+LA +ARLF+PRLIIA T
Sbjct: 182 RISATSIFFESMPYKLNPQTGLIDYDQLALTARLFRPRLIIAGT 225
>UNIPROTKB|F1SL74 [details] [associations]
symbol:LOC100626911 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:CU633428 EMBL:FP340566
Ensembl:ENSSSCT00000023184 Ensembl:ENSSSCT00000023666
Uniprot:F1SL74
Length = 504
Score = 198 (74.8 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A YT L
Sbjct: 104 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTAL 154
Score = 173 (66.0 bits), Expect = 7.8e-31, Sum P(2) = 7.8e-31
Identities = 34/44 (77%), Positives = 41/44 (93%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
+ISATSIFFES+PYK+N +TGLIDYD+LA +ARLF+PRLIIA T
Sbjct: 182 RISATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLIIAGT 225
>UNIPROTKB|P34897 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005758 "mitochondrial intermembrane
space" evidence=IEA] [GO:0006564 "L-serine biosynthetic process"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008732 "L-allo-threonine aldolase
activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IDA]
[GO:0006730 "one-carbon metabolic process" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0008284
EMBL:CH471054 DrugBank:DB00114 GO:GO:0003682 GO:GO:0016597
GO:GO:0051289 GO:GO:0042645 DrugBank:DB00145 DrugBank:DB00116
GO:GO:0008168 GO:GO:0006730 GO:GO:0035999 GO:GO:0006564
GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
HOVERGEN:HBG002807 CTD:6472 EMBL:AK315916 EMBL:BT006866
EMBL:AC137834 EMBL:BC011911 EMBL:BC013677 EMBL:BC032584
EMBL:BC044211 EMBL:Y12331 EMBL:U23143 EMBL:L11932 IPI:IPI00002520
IPI:IPI00795816 PIR:B46746 RefSeq:NP_001159828.1
RefSeq:NP_001159829.1 RefSeq:NP_001159830.1 RefSeq:NP_001159831.1
RefSeq:NP_005403.2 UniGene:Hs.741179 PDB:3OU5 PDBsum:3OU5
ProteinModelPortal:P34897 SMR:P34897 IntAct:P34897 STRING:P34897
PhosphoSite:P34897 DMDM:6226865 PaxDb:P34897 PRIDE:P34897
DNASU:6472 Ensembl:ENST00000328923 Ensembl:ENST00000414700
Ensembl:ENST00000449049 Ensembl:ENST00000553474
Ensembl:ENST00000557487 GeneID:6472 KEGG:hsa:6472 UCSC:uc001snf.2
GeneCards:GC12P057623 HGNC:HGNC:10852 HPA:HPA020543 HPA:HPA020549
MIM:138450 neXtProt:NX_P34897 PharmGKB:PA35755 InParanoid:P34897
PhylomeDB:P34897 BioCyc:MetaCyc:HS00049-MONOMER ChiTaRS:SHMT2
EvolutionaryTrace:P34897 GenomeRNAi:6472 NextBio:25141
ArrayExpress:P34897 Bgee:P34897 CleanEx:HS_SHMT2
Genevestigator:P34897 GermOnline:ENSG00000182199 Uniprot:P34897
Length = 504
Score = 202 (76.2 bits), Expect = 9.5e-31, Sum P(2) = 9.5e-31
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AVYT L
Sbjct: 104 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 154
Score = 168 (64.2 bits), Expect = 9.5e-31, Sum P(2) = 9.5e-31
Identities = 33/44 (75%), Positives = 41/44 (93%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
+ISATSIFFES+PYK+N +TGLIDY++LA +ARLF+PRLIIA T
Sbjct: 182 RISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGT 225
>UNIPROTKB|E2R4L7 [details] [associations]
symbol:SHMT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:AAEX03006944 EMBL:AAEX03006943
Ensembl:ENSCAFT00000000313 NextBio:20893182 Uniprot:E2R4L7
Length = 531
Score = 198 (74.8 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A YT L
Sbjct: 149 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTAL 199
Score = 172 (65.6 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 33/44 (75%), Positives = 41/44 (93%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
++SATSIFFES+PYK+N +TGLIDYD+LA +ARLF+PRLIIA T
Sbjct: 227 RVSATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLIIAGT 270
>UNIPROTKB|P14519 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9986 "Oryctolagus cuniculus" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0005743 GO:GO:0003682 GO:GO:0042645 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807 CTD:6472
EMBL:X91902 RefSeq:NP_001075874.1 UniGene:Ocu.3292
ProteinModelPortal:P14519 SMR:P14519 STRING:P14519 PRIDE:P14519
GeneID:100009293 Uniprot:P14519
Length = 504
Score = 198 (74.8 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN A YT L
Sbjct: 104 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTAL 154
Score = 169 (64.5 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 32/44 (72%), Positives = 41/44 (93%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
++SATSIFFES+PYK+N +TGLIDY++LA +ARLF+PRLIIA T
Sbjct: 182 RVSATSIFFESMPYKLNPQTGLIDYEQLALTARLFRPRLIIAGT 225
>ZFIN|ZDB-GENE-071213-1 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2
(mitochondrial)" species:7955 "Danio rerio" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA;IDA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 ZFIN:ZDB-GENE-071213-1 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
HOVERGEN:HBG002807 CTD:6472 EMBL:CABZ01098501 EMBL:CABZ01112226
EMBL:CABZ01112227 EMBL:CABZ01112228 EMBL:CABZ01112229
EMBL:CABZ01112230 EMBL:EF213101 IPI:IPI00862356
RefSeq:NP_001116846.1 UniGene:Dr.128606 SMR:A9LDD9 STRING:A9LDD9
Ensembl:ENSDART00000111064 GeneID:100144628 KEGG:dre:100144628
NextBio:20791462 Uniprot:A9LDD9
Length = 492
Score = 194 (73.4 bits), Expect = 9.2e-29, Sum P(2) = 9.2e-29
Identities = 32/51 (62%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +D+IE++ Q+R+L+AF+LDP+ WG NVQPYSGSPANFA YT +
Sbjct: 93 RYYGGAEVVDQIELLCQKRALEAFDLDPQLWGVNVQPYSGSPANFAAYTAV 143
Score = 157 (60.3 bits), Expect = 9.2e-29, Sum P(2) = 9.2e-29
Identities = 29/44 (65%), Positives = 40/44 (90%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
+ISATSI+FES+PYK+N +TGLIDYD++ +A+LF+P+LIIA T
Sbjct: 171 RISATSIYFESMPYKLNPKTGLIDYDQMELTAKLFRPKLIIAGT 214
>UNIPROTKB|Q60V73 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6238 "Caenorhabditis briggsae" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0009069 "serine family amino
acid metabolic process" evidence=TAS] [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:HE600934 HSSP:P07511
ProteinModelPortal:Q60V73 STRING:Q60V73 PRIDE:Q60V73
EnsemblMetazoa:CBG19673 WormBase:CBG19673 GO:GO:0009069
Uniprot:Q60V73
Length = 511
Score = 195 (73.7 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGGN+FID++EI+ Q+R+L+ F LDP +WG NVQ SGSPANFAVYT L
Sbjct: 111 RYYGGNEFIDQMEILCQKRALEVFGLDPAKWGVNVQSLSGSPANFAVYTAL 161
Score = 151 (58.2 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 27/42 (64%), Positives = 38/42 (90%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
K+SATS FF+S+PYKV+ ++GLIDYDKL E+A LF+P+++IA
Sbjct: 189 KVSATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPKVLIA 230
>DICTYBASE|DDB_G0291652 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2"
species:44689 "Dictyostelium discoideum" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;ISS] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0291652 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0005759
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:DYLIDMD
HSSP:P34897 ProtClustDB:PTZ00094 RefSeq:XP_635129.1
ProteinModelPortal:Q54EW1 SMR:Q54EW1 STRING:Q54EW1 PRIDE:Q54EW1
EnsemblProtists:DDB0230073 GeneID:8628075 KEGG:ddi:DDB_G0291652
Uniprot:Q54EW1
Length = 481
Score = 187 (70.9 bits), Expect = 8.8e-27, Sum P(2) = 8.8e-27
Identities = 31/51 (60%), Positives = 43/51 (84%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGGN+ +D++E + +R+L+ FNL+PE+WG NVQPYSGS ANFA +TGL
Sbjct: 89 RYYGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGL 139
Score = 145 (56.1 bits), Expect = 8.8e-27, Sum P(2) = 8.8e-27
Identities = 28/42 (66%), Positives = 37/42 (88%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
KISATSIFFES+PY+VN ETG +DY+K+ +A LF+P+L+IA
Sbjct: 167 KISATSIFFESMPYQVN-ETGYVDYNKMEANAALFRPKLLIA 207
>POMBASE|SPAC24C9.12c [details] [associations]
symbol:SPAC24C9.12c "glycine hydroxymethyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC24C9.12c
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670 GO:GO:0006730
GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OrthoDB:EOG444PTT PIR:T38353 RefSeq:NP_594037.1
ProteinModelPortal:O13972 SMR:O13972 STRING:O13972 PRIDE:O13972
EnsemblFungi:SPAC24C9.12c.1 GeneID:2542651 KEGG:spo:SPAC24C9.12c
OMA:HMVLVDV NextBio:20803700 Uniprot:O13972
Length = 467
Score = 180 (68.4 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGGN+FID+IE + Q+R+L AFNLDP +WG NVQ SGSPAN VY +
Sbjct: 67 RYYGGNKFIDQIETLCQERALAAFNLDPAKWGVNVQCLSGSPANMQVYQAI 117
Score = 140 (54.3 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISA S +FES+PY+V+ TGLIDYD L A+LF+P++++A T
Sbjct: 145 KISAVSTYFESMPYRVDPNTGLIDYDMLEHDAQLFRPKILVAGT 188
>SGD|S000004048 [details] [associations]
symbol:SHM2 "Cytosolic serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IMP;IDA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0006730 "one-carbon metabolic
process" evidence=IEA;IGI;IMP] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0043332 "mating projection
tip" evidence=IDA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000004048
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0043332 EMBL:BK006945 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 EMBL:X94607 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 EMBL:L22529 EMBL:Z73230 PIR:S61632
RefSeq:NP_013159.1 ProteinModelPortal:P37291 SMR:P37291
DIP:DIP-2602N IntAct:P37291 MINT:MINT-423439 STRING:P37291
PaxDb:P37291 PeptideAtlas:P37291 PRIDE:P37291 EnsemblFungi:YLR058C
GeneID:850747 KEGG:sce:YLR058C CYGD:YLR058c OMA:FRRGVRS
OrthoDB:EOG444PTT BioCyc:MetaCyc:YLR058C-MONOMER NextBio:966873
Genevestigator:P37291 GermOnline:YLR058C Uniprot:P37291
Length = 469
Score = 173 (66.0 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGGN+ ID +EI+ QQR+LKAF++ P++WG NVQ SGSPAN VY +
Sbjct: 72 RYYGGNEHIDRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPANLQVYQAI 122
Score = 140 (54.3 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 25/44 (56%), Positives = 36/44 (81%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISA S +FES PY+VN ETG+IDYD L ++A L++P++++A T
Sbjct: 150 KISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKVLVAGT 193
>UNIPROTKB|G4NDG3 [details] [associations]
symbol:MGG_00923 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CM001235 GO:GO:0008168
GO:GO:0043581 GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003718036.1
ProteinModelPortal:G4NDG3 SMR:G4NDG3 EnsemblFungi:MGG_00923T0
GeneID:2674480 KEGG:mgr:MGG_00923 Uniprot:G4NDG3
Length = 482
Score = 167 (63.8 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGGNQ IDEIE++ Q+R+L AFN+ ++WG NVQ SGSPAN VY +
Sbjct: 75 RYYGGNQHIDEIELLCQRRALAAFNVTEDKWGVNVQCLSGSPANLQVYQAI 125
Score = 133 (51.9 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 22/44 (50%), Positives = 37/44 (84%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISA S +FE++PY+V+ ETG+IDYD+L ++ L++P++++A T
Sbjct: 153 KISAVSTYFETMPYRVDLETGIIDYDQLEKNVVLYRPKILVAGT 196
>POMBASE|SPAC18G6.04c [details] [associations]
symbol:shm2 "serine hydroxymethyltransferase Shm2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IC] [GO:0009070 "serine family amino acid biosynthetic
process" evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC18G6.04c
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 PIR:T37918 RefSeq:NP_593668.2 STRING:Q10104
EnsemblFungi:SPAC18G6.04c.1 GeneID:2542242 OrthoDB:EOG4V1B88
NextBio:20803308 GO:GO:0009070 Uniprot:Q10104
Length = 488
Score = 173 (66.0 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVY 60
+YYGGN+FID+ E + Q R+L+AF+LD E+WG NVQP+SGSPAN Y
Sbjct: 89 RYYGGNEFIDQAERLCQTRALEAFHLDGEKWGVNVQPHSGSPANLQAY 136
Score = 124 (48.7 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 65 ISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
ISA S +F ++PY VN ETG+IDYD L ++A F+P++I+A
Sbjct: 168 ISAVSTYFSTMPYNVNKETGIIDYDSLEKAAIQFRPKVIVA 208
>UNIPROTKB|G3V4W5 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4W5 SMR:G3V4W5 Ensembl:ENST00000556689
ArrayExpress:G3V4W5 Bgee:G3V4W5 Uniprot:G3V4W5
Length = 237
Score = 202 (76.2 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AVYT L
Sbjct: 104 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 154
Score = 76 (31.8 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 14/17 (82%), Positives = 17/17 (100%)
Query: 64 KISATSIFFESLPYKVN 80
+ISATSIFFES+PYK+N
Sbjct: 182 RISATSIFFESMPYKLN 198
>UNIPROTKB|G3V540 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
SMR:G3V540 Ensembl:ENST00000553837 Ensembl:ENST00000554604
Uniprot:G3V540
Length = 192
Score = 202 (76.2 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AVYT L
Sbjct: 83 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 133
Score = 76 (31.8 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 14/17 (82%), Positives = 17/17 (100%)
Query: 64 KISATSIFFESLPYKVN 80
+ISATSIFFES+PYK+N
Sbjct: 161 RISATSIFFESMPYKLN 177
>UNIPROTKB|G4MRB4 [details] [associations]
symbol:MGG_13781 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:CM001231 GO:GO:0006544 GO:GO:0035999 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003710851.1
ProteinModelPortal:G4MRB4 SMR:G4MRB4 EnsemblFungi:MGG_13781T0
GeneID:5049001 KEGG:mgr:MGG_13781 Uniprot:G4MRB4
Length = 516
Score = 168 (64.2 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGGN+FID+ E + QQR+L+ F LD +QWG NVQ SG+PAN VY+ L
Sbjct: 98 RYYGGNEFIDQSERLCQQRALETFGLDDKQWGVNVQALSGAPANLYVYSAL 148
Score = 124 (48.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KIS S +FE++PY+++ TG IDYDKL E A +++P++I+A T
Sbjct: 176 KISFISKYFETVPYRLDESTGYIDYDKLEELAHIYRPKIIVAGT 219
>UNIPROTKB|J3KRZ5 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008732 "L-allo-threonine aldolase activity" evidence=IEA]
[GO:0016597 "amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] InterPro:IPR001085
InterPro:IPR015421 Pfam:PF00464 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 EMBL:AC127537
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 Ensembl:ENST00000582653 Uniprot:J3KRZ5
Length = 167
Score = 204 (76.9 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG +FIDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAVYT L
Sbjct: 81 RYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTAL 131
Score = 42 (19.8 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 9/9 (100%), Positives = 9/9 (100%)
Query: 64 KISATSIFF 72
KISATSIFF
Sbjct: 159 KISATSIFF 167
>SGD|S000000467 [details] [associations]
symbol:SHM1 "Mitochondrial serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IMP] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;IGI;IMP] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IGI] [GO:0016740 "transferase
activity" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000000467
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:BK006936 EMBL:X70529
EMBL:Z36131 GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
OrthoDB:EOG4V1B88 GO:GO:0009070 EMBL:L22528 PIR:S29348
RefSeq:NP_009822.4 RefSeq:NP_009827.3 ProteinModelPortal:P37292
SMR:P37292 DIP:DIP-4952N IntAct:P37292 MINT:MINT-548725
STRING:P37292 PaxDb:P37292 PeptideAtlas:P37292 PRIDE:P37292
EnsemblFungi:YBR263W GeneID:852565 GeneID:852571 KEGG:sce:YBR263W
KEGG:sce:YBR268W CYGD:YBR263w OMA:GFNENDV
BioCyc:MetaCyc:YBR263W-MONOMER NextBio:971682 Genevestigator:P37292
GermOnline:YBR263W Uniprot:P37292
Length = 490
Score = 160 (61.4 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGGN+ ID+ E + Q R+L+ + LDP +WG NVQP SG+PAN VY+ +
Sbjct: 88 RYYGGNEIIDKSESLCQARALELYGLDPAKWGVNVQPLSGAPANLYVYSAI 138
Score = 118 (46.6 bits), Expect = 6.2e-19, Sum P(2) = 6.2e-19
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 57 FAVYTGLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
+ + +G IS S +F+S+PY V+ TGLIDYD L A+ F+P++I+A T
Sbjct: 160 YQLKSGTPISFISKYFQSMPYHVDHTTGLIDYDNLQVLAKAFRPKVIVAGT 210
>MGI|MGI:98299 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006544 "glycine metabolic process" evidence=ISO]
[GO:0006545 "glycine biosynthetic process" evidence=ISO]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0006565
"L-serine catabolic process" evidence=ISO] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=ISO] [GO:0009113 "purine nucleobase
biosynthetic process" evidence=ISO] [GO:0016597 "amino acid
binding" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=ISO] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0046655 "folic acid metabolic process" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051289
"protein homotetramerization" evidence=ISO] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
MGI:MGI:98299 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0009113 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565
EMBL:AL596215 GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 OrthoDB:EOG42Z4Q2
ChiTaRS:SHMT1 EMBL:AF237702 EMBL:BC026055 EMBL:X94478 EMBL:X94479
IPI:IPI00118059 PIR:JC4959 RefSeq:NP_033197.2 UniGene:Mm.364956
PDB:1EJI PDBsum:1EJI ProteinModelPortal:P50431 SMR:P50431
STRING:P50431 PhosphoSite:P50431 REPRODUCTION-2DPAGE:P50431
SWISS-2DPAGE:P50431 PaxDb:P50431 PRIDE:P50431
Ensembl:ENSMUST00000018744 GeneID:20425 KEGG:mmu:20425
InParanoid:Q8R0X9 OMA:KEALEPW ChEMBL:CHEMBL4396
EvolutionaryTrace:P50431 NextBio:298438 Bgee:P50431
CleanEx:MM_SHMT1 Genevestigator:P50431
GermOnline:ENSMUSG00000020534 Uniprot:P50431
Length = 478
Score = 211 (79.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 45/98 (45%), Positives = 64/98 (65%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGG +FIDE+E++ Q+R+L+A++LDP+ WG NVQPYSGSPANFAVYT L I
Sbjct: 75 RYYGGTEFIDELEMLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMG 134
Query: 73 ESLPYKVNTETGLI-DYDKLAESARLFK--PRLIIAET 107
LP + G + D K++ ++ F+ P + ET
Sbjct: 135 LDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVYPET 172
Score = 156 (60.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISATSIFFES+PYKV ETG I+YD+L E+A LF P+LIIA T
Sbjct: 153 KISATSIFFESMPYKVYPETGYINYDQLEENASLFHPKLIIAGT 196
>UNIPROTKB|E2RIV3 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0051262 "protein tetramerization" evidence=IEA]
[GO:0046655 "folic acid metabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739
GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 GO:GO:0009113
GO:GO:0006544 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 CTD:6470
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AAEX03003713
EMBL:AAEX03003714 RefSeq:XP_851819.2 Ensembl:ENSCAFT00000028996
GeneID:489536 KEGG:cfa:489536 Uniprot:E2RIV3
Length = 484
Score = 210 (79.0 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 46/98 (46%), Positives = 62/98 (63%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGG +FIDE+EI+ Q+R+L+ + LDPE WG NVQPYSGSPANFAVYT L I
Sbjct: 81 RYYGGTEFIDELEILCQKRALQVYGLDPECWGVNVQPYSGSPANFAVYTALVEPHGRIMG 140
Query: 73 ESLPYKVNTETGLI-DYDKLAESARLFK--PRLIIAET 107
LP + G + D K++ ++ F+ P + ET
Sbjct: 141 LDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPET 178
Score = 170 (64.9 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 34/44 (77%), Positives = 39/44 (88%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISATSIFFES+PYKVN ETG I+YD+L E+ARLF P+LIIA T
Sbjct: 159 KISATSIFFESMPYKVNPETGYINYDQLEENARLFHPKLIIAGT 202
>UNIPROTKB|G3V241 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V241 SMR:G3V241 Ensembl:ENST00000557703
ArrayExpress:G3V241 Bgee:G3V241 Uniprot:G3V241
Length = 142
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AVYT L
Sbjct: 83 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 133
>UNIPROTKB|G3V2E4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0006544 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2E4 SMR:G3V2E4 Ensembl:ENST00000557433
ArrayExpress:G3V2E4 Bgee:G3V2E4 Uniprot:G3V2E4
Length = 171
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AVYT L
Sbjct: 104 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 154
>UNIPROTKB|G3V2W0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V2W0 SMR:G3V2W0 Ensembl:ENST00000554310
ArrayExpress:G3V2W0 Bgee:G3V2W0 Uniprot:G3V2W0
Length = 160
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AVYT L
Sbjct: 83 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 133
>UNIPROTKB|G3V3Y8 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2 SMR:G3V3Y8
Ensembl:ENST00000553529 Ensembl:ENST00000556737 Uniprot:G3V3Y8
Length = 147
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AVYT L
Sbjct: 83 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 133
>UNIPROTKB|G3V4T0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4T0 SMR:G3V4T0 Ensembl:ENST00000555773
ArrayExpress:G3V4T0 Bgee:G3V4T0 Uniprot:G3V4T0
Length = 149
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AVYT L
Sbjct: 83 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 133
>UNIPROTKB|G3V4X0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005758
"mitochondrial intermembrane space" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006564 "L-serine
biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0019264 "glycine
biosynthetic process from serine" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0051289 "protein
homotetramerization" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR001085 InterPro:IPR015421 Pfam:PF00464 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0005759
GO:GO:0008284 GO:GO:0016597 GO:GO:0051289 GO:GO:0006564
GO:GO:0008732 GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264
EMBL:AC137834 HGNC:HGNC:10852 ChiTaRS:SHMT2
ProteinModelPortal:G3V4X0 SMR:G3V4X0 Ensembl:ENST00000557427
ArrayExpress:G3V4X0 Bgee:G3V4X0 Uniprot:G3V4X0
Length = 159
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +DEIE++ Q+R+L+AF+LDP QWG NVQPYSGSPAN AVYT L
Sbjct: 83 RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 133
>UNIPROTKB|E1BS67 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0009113
"purine nucleobase biosynthetic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0046655
"folic acid metabolic process" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 GO:GO:0004372 PANTHER:PTHR11680
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AADN02023704
IPI:IPI00573440 Ensembl:ENSGALT00000008093 Uniprot:E1BS67
Length = 486
Score = 209 (78.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 42/88 (47%), Positives = 59/88 (67%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGG +F+DE+E + Q+R+L+AF LDP++WG NVQPYSGSPANFAVYT L I
Sbjct: 83 RYYGGTEFVDELERLCQKRALQAFRLDPQKWGVNVQPYSGSPANFAVYTALVEPHGRIMG 142
Query: 73 ESLPYKVNTETGLI-DYDKLAESARLFK 99
LP + G + D K++ ++ F+
Sbjct: 143 LDLPDGGHLTHGFMTDKKKISATSVFFE 170
Score = 171 (65.3 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 33/42 (78%), Positives = 38/42 (90%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
KISATS+FFES+PYKVN +TG IDYDKL E+ARLF P+LIIA
Sbjct: 161 KISATSVFFESMPYKVNPKTGYIDYDKLEENARLFHPKLIIA 202
>UNIPROTKB|A8MYA6 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005634 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
EMBL:AC127537 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 IPI:IPI00793862
ProteinModelPortal:A8MYA6 SMR:A8MYA6 STRING:A8MYA6
Ensembl:ENST00000395685 ArrayExpress:A8MYA6 Bgee:A8MYA6
Uniprot:A8MYA6
Length = 446
Score = 205 (77.2 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGG +FIDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAVYT L I
Sbjct: 81 RYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMG 140
Query: 73 ESLPYKVNTETGLI-DYDKLAESARLFK 99
LP + G + D K++ ++ F+
Sbjct: 141 LDLPDGGHLTHGFMTDKKKISATSIFFE 168
Score = 167 (63.8 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISATSIFFES+PYKVN +TG I+YD+L E+ARLF P+LIIA T
Sbjct: 159 KISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGT 202
>UNIPROTKB|P34896 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0051262 "protein tetramerization" evidence=IDA]
[GO:0046655 "folic acid metabolic process" evidence=IDA;TAS]
[GO:0030170 "pyridoxal phosphate binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA;TAS] [GO:0006565
"L-serine catabolic process" evidence=IDA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IDA] [GO:0006766 "vitamin
metabolic process" evidence=TAS] [GO:0006767 "water-soluble vitamin
metabolic process" evidence=TAS] [GO:0034641 "cellular nitrogen
compound metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0045329 "carnitine
biosynthetic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
UniPathway:UPA00193 Reactome:REACT_111217 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 EMBL:L11931
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0042803
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 DrugBank:DB00114
GO:GO:0016597 GO:GO:0051289 GO:GO:0045329 DrugBank:DB00145
DrugBank:DB00116 EMBL:CH471196 GO:GO:0009113 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 DrugBank:DB01055 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 EMBL:L23928 EMBL:Y14485 EMBL:Y14486 EMBL:Y14487
EMBL:BC007979 EMBL:BC022874 EMBL:BC038598 IPI:IPI00002519
IPI:IPI00220668 IPI:IPI00220669 PIR:A46746 RefSeq:NP_004160.3
RefSeq:NP_683718.1 UniGene:Hs.513987 UniGene:Hs.636044 PDB:1BJ4
PDBsum:1BJ4 ProteinModelPortal:P34896 SMR:P34896 IntAct:P34896
STRING:P34896 PhosphoSite:P34896 DMDM:462184 PaxDb:P34896
PRIDE:P34896 DNASU:6470 Ensembl:ENST00000316694
Ensembl:ENST00000352886 Ensembl:ENST00000354098 GeneID:6470
KEGG:hsa:6470 UCSC:uc002gsz.3 UCSC:uc002gtb.3 GeneCards:GC17M018231
HGNC:HGNC:10850 HPA:HPA023314 MIM:182144 neXtProt:NX_P34896
PharmGKB:PA35753 InParanoid:P34896 OMA:VDLRESH BindingDB:P34896
ChEMBL:CHEMBL1772927 ChiTaRS:SHMT1 EvolutionaryTrace:P34896
GenomeRNAi:6470 NextBio:25133 ArrayExpress:P34896 Bgee:P34896
CleanEx:HS_SHMT1 Genevestigator:P34896 GermOnline:ENSG00000176974
Uniprot:P34896
Length = 483
Score = 205 (77.2 bits), Expect = 8.6e-16, P = 8.6e-16
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGG +FIDE+E + Q+R+L+A+ LDP+ WG NVQPYSGSPANFAVYT L I
Sbjct: 81 RYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMG 140
Query: 73 ESLPYKVNTETGLI-DYDKLAESARLFK 99
LP + G + D K++ ++ F+
Sbjct: 141 LDLPDGGHLTHGFMTDKKKISATSIFFE 168
Score = 167 (63.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISATSIFFES+PYKVN +TG I+YD+L E+ARLF P+LIIA T
Sbjct: 159 KISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGT 202
>RGD|1312011 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISO;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA;TAS] [GO:0006544 "glycine
metabolic process" evidence=IDA;TAS] [GO:0006545 "glycine
biosynthetic process" evidence=IDA] [GO:0006563 "L-serine metabolic
process" evidence=TAS] [GO:0006565 "L-serine catabolic process"
evidence=IEA;ISO] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IDA] [GO:0009113 "purine nucleobase biosynthetic process"
evidence=IEA;ISO] [GO:0016597 "amino acid binding" evidence=IPI]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO;IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0046655 "folic acid metabolic
process" evidence=IEA;ISO] [GO:0051262 "protein tetramerization"
evidence=ISO] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 RGD:1312011 GO:GO:0005829
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0009113
GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 GO:GO:0008732 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264
CTD:6470 GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 UniGene:Rn.3684 EMBL:AY383687 IPI:IPI00421364
RefSeq:NP_001041307.1 SMR:Q6TXG7 STRING:Q6TXG7
Ensembl:ENSRNOT00000007092 GeneID:287379 KEGG:rno:287379
UCSC:RGD:1312011 InParanoid:Q6TXG7 NextBio:625985
Genevestigator:Q6TXG7 Uniprot:Q6TXG7
Length = 681
Score = 206 (77.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 42/88 (47%), Positives = 59/88 (67%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGG +FIDE+E + Q+R+L+A++LDP+ WG NVQPYSGSPANFAVYT L I
Sbjct: 278 RYYGGTEFIDELETLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMG 337
Query: 73 ESLPYKVNTETGLI-DYDKLAESARLFK 99
LP + G + D K++ ++ F+
Sbjct: 338 LDLPDGGHLTHGFMTDKKKISATSIFFE 365
Score = 153 (58.9 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISATSIFFES+PYKV +TG I+YD+L E+A LF P+LIIA T
Sbjct: 356 KISATSIFFESMPYKVYPDTGYINYDQLEENASLFHPKLIIAGT 399
>DICTYBASE|DDB_G0277947 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;ISS] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0006730 "one-carbon metabolic process" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0277947 GO:GO:0005829 GO:GO:0045335 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897
RefSeq:XP_642026.1 ProteinModelPortal:Q54Z26 SMR:Q54Z26
STRING:Q54Z26 EnsemblProtists:DDB0230072 GeneID:8621237
KEGG:ddi:DDB_G0277947 OMA:LKEVASP ProtClustDB:PTZ00094
Uniprot:Q54Z26
Length = 457
Score = 201 (75.8 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 46/101 (45%), Positives = 61/101 (60%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGG + +DE+E + Q+R+LKAF LD +WG NVQPYSGSPANFAVYT L I
Sbjct: 65 RYYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMG 124
Query: 73 ESLPYKVNTETGL-IDYDKLAESARLFK--PRLIIAETIED 110
LP + G D K++ S+ F+ P I A+ + D
Sbjct: 125 LDLPSGGHLTHGYQTDKKKISASSIFFESMPYQIGADGLID 165
Score = 137 (53.3 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 27/42 (64%), Positives = 36/42 (85%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
KISA+SIFFES+PY++ + GLIDY +L E+A LFKP+LII+
Sbjct: 143 KISASSIFFESMPYQIGAD-GLIDYQRLEENALLFKPKLIIS 183
>ZFIN|ZDB-GENE-040426-1558 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1
(soluble)" species:7955 "Danio rerio" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
ZFIN:ZDB-GENE-040426-1558 GO:GO:0005829 GO:GO:0005634 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 GeneTree:ENSGT00390000002762
EMBL:BX649440 IPI:IPI00994921 Ensembl:ENSDART00000124883
Bgee:F1QY03 Uniprot:F1QY03
Length = 504
Score = 201 (75.8 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 44/95 (46%), Positives = 56/95 (58%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGG + +DE+E + Q R+LK + LDPE+WG NVQPYSGSPANFAVYT + I
Sbjct: 103 RYYGGTEHVDELERLCQDRALKVYGLDPEKWGVNVQPYSGSPANFAVYTAIVEPHGRIMG 162
Query: 73 ESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
LP + G + DK SA P + ET
Sbjct: 163 LDLPDGGHLTHGFMT-DKKKISATSSMPYKVNPET 196
Score = 138 (53.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 31/44 (70%), Positives = 35/44 (79%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISATS S+PYKVN ETG IDY++L E+ARLF PRLIIA T
Sbjct: 181 KISATS----SMPYKVNPETGYIDYNRLEENARLFHPRLIIAGT 220
>WB|WBGene00003214 [details] [associations]
symbol:mel-32 species:6239 "Caenorhabditis elegans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 201 (75.8 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGGN+FID++E++ Q+R+L+ F LDP +WG NVQP SGSPANFAVYT + S I
Sbjct: 107 RYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMG 166
Query: 73 ESLP 76
LP
Sbjct: 167 LDLP 170
Score = 150 (57.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
K+SATS FF+SLPYKV+ TGLIDYDKL ++A LF+P+ IIA
Sbjct: 185 KVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIA 226
>UNIPROTKB|P50432 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6239 "Caenorhabditis elegans" [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] [GO:0009790 "embryo development"
evidence=IMP] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=TAS] [GO:0009069 "serine family amino acid
metabolic process" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 201 (75.8 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGGN+FID++E++ Q+R+L+ F LDP +WG NVQP SGSPANFAVYT + S I
Sbjct: 107 RYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMG 166
Query: 73 ESLP 76
LP
Sbjct: 167 LDLP 170
Score = 150 (57.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
K+SATS FF+SLPYKV+ TGLIDYDKL ++A LF+P+ IIA
Sbjct: 185 KVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIA 226
>TAIR|locus:2119545 [details] [associations]
symbol:EDA36 "EMBRYO SAC DEVELOPMENT ARREST 37"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0010197 "polar nucleus fusion" evidence=IMP]
[GO:0009555 "pollen development" evidence=IMP] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009555 GO:GO:0008168
GO:GO:0006544 GO:GO:0010197 GO:GO:0035999 EMBL:AL035528
EMBL:AL161537 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN03226 IPI:IPI00536506 PIR:T05258 RefSeq:NP_193125.1
UniGene:At.33326 ProteinModelPortal:Q9SVM4 SMR:Q9SVM4 STRING:Q9SVM4
EnsemblPlants:AT4G13890.1 GeneID:827024 KEGG:ath:AT4G13890
TAIR:At4g13890 InParanoid:Q9SVM4 OMA:MAHNSAL PhylomeDB:Q9SVM4
ArrayExpress:Q9SVM4 Genevestigator:Q9SVM4 Uniprot:Q9SVM4
Length = 470
Score = 200 (75.5 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG +FIDEIE + + RSL+AF+ +PE+WG NVQPYSGSPANFA YT L
Sbjct: 67 RYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTAL 117
Score = 150 (57.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 51 SGSPANFAVYT--GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
SG Y+ G ISATSI+FE+LPYKV+++TG IDYDKL E A F+P+LII
Sbjct: 131 SGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLII 186
>TAIR|locus:2129251 [details] [associations]
symbol:SHM4 "serine hydroxymethyltransferase 4"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISS;IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829 GO:GO:0005886
GO:GO:0009506 GO:GO:0046686 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97335 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 EMBL:AL161537 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:LKEVASP HSSP:P07511 ProtClustDB:PLN03226 EMBL:AF361589
EMBL:AY093987 IPI:IPI00532971 PIR:B71400 RefSeq:NP_193129.1
UniGene:At.23373 ProteinModelPortal:O23254 SMR:O23254 STRING:O23254
PaxDb:O23254 PRIDE:O23254 ProMEX:O23254 EnsemblPlants:AT4G13930.1
GeneID:827027 KEGG:ath:AT4G13930 TAIR:At4g13930 InParanoid:O23254
PhylomeDB:O23254 Genevestigator:O23254 Uniprot:O23254
Length = 471
Score = 199 (75.1 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 35/51 (68%), Positives = 42/51 (82%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGGN+FIDEIE + + R+L+AF+ DP WG NVQPYSGSPANFA YT L
Sbjct: 67 RYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTAL 117
Score = 159 (61.0 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 35/56 (62%), Positives = 39/56 (69%)
Query: 51 SGSPANFAVYT--GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
SG YT G KISATSI+FESLPYKVN TG IDYDKL E A F+P+L+I
Sbjct: 131 SGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDFRPKLLI 186
>UNIPROTKB|Q5E9P9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9913 "Bos taurus" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] [GO:0046655 "folic acid metabolic
process" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic
process" evidence=IEA] [GO:0006565 "L-serine catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 EMBL:BT020871 EMBL:BC112563
IPI:IPI00695792 RefSeq:NP_001015553.1 UniGene:Bt.88340
ProteinModelPortal:Q5E9P9 SMR:Q5E9P9 STRING:Q5E9P9 PRIDE:Q5E9P9
Ensembl:ENSBTAT00000022732 GeneID:509002 KEGG:bta:509002 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 InParanoid:Q5E9P9
OrthoDB:EOG42Z4Q2 NextBio:20868773 Uniprot:Q5E9P9
Length = 484
Score = 197 (74.4 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 40/88 (45%), Positives = 57/88 (64%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGG +FIDE+E++ Q+R+L+ + LD + WG NVQPYSGSPANFAVYT L I
Sbjct: 81 RYYGGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIMG 140
Query: 73 ESLPYKVNTETGLI-DYDKLAESARLFK 99
LP + G + D K++ ++ F+
Sbjct: 141 LDLPDGGHLTHGFMTDKKKISATSIFFE 168
Score = 170 (64.9 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 34/44 (77%), Positives = 39/44 (88%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISATSIFFES+PYKVN +TG I+YD+L E+ARLF PRLIIA T
Sbjct: 159 KISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPRLIIAGT 202
>TAIR|locus:2005518 [details] [associations]
symbol:SHM1 "serine transhydroxymethyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;TAS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=IMP]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009626
"plant-type hypersensitive response" evidence=TAS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0046686 "response to cadmium
ion" evidence=IEP] [GO:0009409 "response to cold" evidence=IEP;RCA]
[GO:0010319 "stromule" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009853 "photorespiration" evidence=IMP]
[GO:0016020 "membrane" evidence=IDA] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009697 "salicylic acid biosynthetic
process" evidence=RCA] [GO:0009814 "defense response, incompatible
interaction" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005886
GO:GO:0005634 GO:GO:0046686 GO:GO:0009570 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161592 GO:GO:0008266 GO:GO:0005759 GO:GO:0048046
GO:GO:0009409 GO:GO:0009626 EMBL:AL035538 GO:GO:0009853
GO:GO:0009534 GO:GO:0022626 GO:GO:0010319 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 EMBL:AJ271726
EMBL:AY054254 EMBL:AY057645 EMBL:AY070726 EMBL:AF428388
EMBL:BT006353 IPI:IPI00525727 PIR:T05620 RefSeq:NP_195506.1
UniGene:At.21766 ProteinModelPortal:Q9SZJ5 SMR:Q9SZJ5 IntAct:Q9SZJ5
STRING:Q9SZJ5 PaxDb:Q9SZJ5 PRIDE:Q9SZJ5 ProMEX:Q9SZJ5
EnsemblPlants:AT4G37930.1 GeneID:829949 KEGG:ath:AT4G37930
TAIR:At4g37930 InParanoid:Q9SZJ5 PhylomeDB:Q9SZJ5
ProtClustDB:PLN03226 BioCyc:MetaCyc:AT4G37930-MONOMER
Genevestigator:Q9SZJ5 GermOnline:AT4G37930 Uniprot:Q9SZJ5
Length = 517
Score = 196 (74.1 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 41/88 (46%), Positives = 55/88 (62%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGGN++ID E + Q+R+L+AF LDPE+WG NVQP SGSPANF VYT L I
Sbjct: 110 RYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMA 169
Query: 73 ESLPYKVNTETGL-IDYDKLAESARLFK 99
LP+ + G D K++ + F+
Sbjct: 170 LDLPHGGHLSHGYQTDTKKISAVSIFFE 197
Score = 141 (54.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 25/42 (59%), Positives = 36/42 (85%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
KISA SIFFE++PY+++ TG IDYD++ +SA LF+P+LI+A
Sbjct: 188 KISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVA 229
>TAIR|locus:2127806 [details] [associations]
symbol:SHM3 "serine hydroxymethyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0009570
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP002687 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:SKELTGW IPI:IPI00529123 RefSeq:NP_001119098.1
RefSeq:NP_567895.1 UniGene:At.27717 ProteinModelPortal:F4JUC7
SMR:F4JUC7 PRIDE:F4JUC7 EnsemblPlants:AT4G32520.1
EnsemblPlants:AT4G32520.2 GeneID:829387 KEGG:ath:AT4G32520
Uniprot:F4JUC7
Length = 529
Score = 189 (71.6 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGGN++ID++E + Q R+L AF LD +WG NVQP SGSPANFAVYT + I
Sbjct: 138 RYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHDRIMG 197
Query: 73 ESLPY 77
LP+
Sbjct: 198 LDLPH 202
Score = 141 (54.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 25/57 (43%), Positives = 42/57 (73%)
Query: 49 PYSGSPANFAVYTGLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
P+ G ++ + ++S TSI+FES+PY+++ TG++DYD L ++A LF+P+LIIA
Sbjct: 201 PHGGHLSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTATLFRPKLIIA 257
>GENEDB_PFALCIPARUM|PFL1720w [details] [associations]
symbol:PFL1720w "Serine
hydroxymethyltransferase" species:5833 "Plasmodium falciparum"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006730
"one-carbon metabolic process" evidence=TAS] HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00464 PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 151 (58.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF-AVYT--GLK 64
+YYGGN ++D+IE + +R+L+AFN+ E+WG NVQP SGS AN A+Y G+K
Sbjct: 62 RYYGGNDYVDKIEELCYKRALEAFNVSEEEWGVNVQPLSGSAANVQALYALVGVK 116
Score = 79 (32.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
K+S TS FES YK N+E G +D + + A F+P++II
Sbjct: 140 KVSITSDLFESKLYKCNSE-GYVDMESVRNLALSFQPKVII 179
>UNIPROTKB|Q8I566 [details] [associations]
symbol:PFL1720w "Serine hydroxymethyltransferase"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006730 "one-carbon metabolic
process" evidence=TAS] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 151 (58.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANF-AVYT--GLK 64
+YYGGN ++D+IE + +R+L+AFN+ E+WG NVQP SGS AN A+Y G+K
Sbjct: 62 RYYGGNDYVDKIEELCYKRALEAFNVSEEEWGVNVQPLSGSAANVQALYALVGVK 116
Score = 79 (32.9 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
K+S TS FES YK N+E G +D + + A F+P++II
Sbjct: 140 KVSITSDLFESKLYKCNSE-GYVDMESVRNLALSFQPKVII 179
>TAIR|locus:2148463 [details] [associations]
symbol:SHM2 "serine hydroxymethyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine metabolic
process" evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
EMBL:CP002688 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008270 GO:GO:0050897
GO:GO:0005747 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:ERFRAIC HSSP:P07511
ProtClustDB:PLN03226 EMBL:BT001097 EMBL:BT001113 IPI:IPI00525834
RefSeq:NP_568488.2 RefSeq:NP_851081.1 UniGene:At.22652
ProteinModelPortal:Q8GRI1 STRING:Q8GRI1 PaxDb:Q8GRI1 PRIDE:Q8GRI1
EnsemblPlants:AT5G26780.2 EnsemblPlants:AT5G26780.3 GeneID:832736
KEGG:ath:AT5G26780 TAIR:At5g26780 InParanoid:Q8GRI1
PhylomeDB:Q8GRI1 Genevestigator:Q8GRI1 Uniprot:Q8GRI1
Length = 533
Score = 184 (69.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 39/88 (44%), Positives = 53/88 (60%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGGN++ID E + Q+R+L+AF LDP +WG NVQ SGSPANF VYT L I
Sbjct: 110 RYYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMA 169
Query: 73 ESLPYKVNTETGL-IDYDKLAESARLFK 99
LP+ + G D K++ + F+
Sbjct: 170 LDLPHGGHLSHGYQTDTKKISAVSIFFE 197
Score = 141 (54.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 26/42 (61%), Positives = 36/42 (85%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
KISA SIFFE++PY+++ TG IDYD+L +SA LF+P+LI+A
Sbjct: 188 KISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVA 229
>TAIR|locus:2030581 [details] [associations]
symbol:SHM6 "serine hydroxymethyltransferase 6"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0006544
"glycine metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:AC069252 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN02271 EMBL:AY125514 EMBL:BT004532 IPI:IPI00534805
RefSeq:NP_173621.1 UniGene:At.41627 ProteinModelPortal:Q9LM59
SMR:Q9LM59 STRING:Q9LM59 PaxDb:Q9LM59 PRIDE:Q9LM59
EnsemblPlants:AT1G22020.1 GeneID:838807 KEGG:ath:AT1G22020
TAIR:At1g22020 InParanoid:Q9LM59 OMA:IFGAIGK PhylomeDB:Q9LM59
Genevestigator:Q9LM59 Uniprot:Q9LM59
Length = 599
Score = 183 (69.5 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YY GNQ+ID+IEI+ Q+R+L AF L+ E+WG NVQPYS + ANFAV+TGL
Sbjct: 197 RYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGL 247
Score = 141 (54.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 51 SGSPANFAVYT--GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
SG + YT G K+S SIFFES PYKV+ TG IDYDKL E A ++P+++I
Sbjct: 261 SGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPKILI 316
>UNIPROTKB|I3LGT5 [details] [associations]
symbol:I3LGT5 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 EMBL:FP565227
Ensembl:ENSSSCT00000028049 Uniprot:I3LGT5
Length = 161
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 34/44 (77%), Positives = 41/44 (93%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
+ISATSIFFES+PYK+N +TGLIDYD+LA +ARLF+PRLIIA T
Sbjct: 21 RISATSIFFESMPYKLNPKTGLIDYDQLALTARLFRPRLIIAGT 64
>ASPGD|ASPL0000040474 [details] [associations]
symbol:AN3058 species:162425 "Emericella nidulans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;RCA] [GO:0006520 "cellular amino acid metabolic
process" evidence=RCA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001306 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:FRRGVRS ProteinModelPortal:C8VIR5
EnsemblFungi:CADANIAT00010021 Uniprot:C8VIR5
Length = 471
Score = 178 (67.7 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGGNQ ID IE++ Q R+LKAFNLD ++WG NVQ SGSPAN VY L
Sbjct: 73 RYYGGNQHIDAIELLCQSRALKAFNLDADKWGVNVQCLSGSPANLQVYQAL 123
Score = 140 (54.3 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 49 PYSGSPANFAVYTGLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
P+ G ++ KISA S +FE+ PY+VN ETG+IDYD L +A L++P++++A T
Sbjct: 136 PHGGHLSHGYQTPSRKISAVSTYFETFPYRVNLETGIIDYDTLEANAELYRPKILVAGT 194
>UNIPROTKB|G3V2Y4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006564 "L-serine biosynthetic process" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0051289 "protein homotetramerization" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0005743 GO:GO:0005758
GO:GO:0005759 GO:GO:0008284 GO:GO:0016597 GO:GO:0051289
GO:GO:0035999 GO:GO:0006564 GO:GO:0008732 GO:GO:0004372
PANTHER:PTHR11680 GO:GO:0019264 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 ProteinModelPortal:G3V2Y4 SMR:G3V2Y4
Ensembl:ENST00000555634 ArrayExpress:G3V2Y4 Bgee:G3V2Y4
Uniprot:G3V2Y4
Length = 234
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 33/44 (75%), Positives = 41/44 (93%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
+ISATSIFFES+PYK+N +TGLIDY++LA +ARLF+PRLIIA T
Sbjct: 21 RISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGT 64
>CGD|CAL0003822 [details] [associations]
symbol:SHM1 species:5476 "Candida albicans" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006544 "glycine metabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IEA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 175 (66.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGGN+ ID+ E + Q+R+L+AF LDP QWG NVQP SG+PAN Y+ + I
Sbjct: 94 RYYGGNEIIDKAEALCQKRALEAFGLDPSQWGVNVQPLSGAPANLYAYSAILEVGDRIMG 153
Query: 73 ESLPY 77
LP+
Sbjct: 154 LDLPH 158
Score = 131 (51.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 24/57 (42%), Positives = 41/57 (71%)
Query: 49 PYSGSPANFAVYTGLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
P+ G ++ KIS S +F+++PY++N ETG+IDYD L ++A+LF+P++I+A
Sbjct: 157 PHGGHLSHGYQTNTTKISYISKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPKVIVA 213
>UNIPROTKB|Q59PP7 [details] [associations]
symbol:SHM1 "Putative uncharacterized protein SHM1"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006544 "glycine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 175 (66.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGGN+ ID+ E + Q+R+L+AF LDP QWG NVQP SG+PAN Y+ + I
Sbjct: 94 RYYGGNEIIDKAEALCQKRALEAFGLDPSQWGVNVQPLSGAPANLYAYSAILEVGDRIMG 153
Query: 73 ESLPY 77
LP+
Sbjct: 154 LDLPH 158
Score = 131 (51.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 24/57 (42%), Positives = 41/57 (71%)
Query: 49 PYSGSPANFAVYTGLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
P+ G ++ KIS S +F+++PY++N ETG+IDYD L ++A+LF+P++I+A
Sbjct: 157 PHGGHLSHGYQTNTTKISYISKYFQTMPYRLNEETGIIDYDTLEKNAQLFRPKVIVA 213
>CGD|CAL0001464 [details] [associations]
symbol:SHM2 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] [GO:0043332 "mating projection
tip" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 172 (65.6 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 38/98 (38%), Positives = 56/98 (57%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGGN+ ID +E++ Q+R+LKAF L P++WG NVQ SGSPAN VY + +
Sbjct: 73 RYYGGNEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMG 132
Query: 73 ESLPYKVNTETGL-IDYDKLAESARLFK--PRLIIAET 107
LP+ + G D K++ + F+ P + ET
Sbjct: 133 LDLPHGGHLSHGYQTDSRKISAVSTYFETMPYRVDLET 170
Score = 137 (53.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 49 PYSGSPANFAVYTGLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
P+ G ++ KISA S +FE++PY+V+ ETGLIDYD L ++A L++P++++A T
Sbjct: 136 PHGGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGT 194
>UNIPROTKB|O13426 [details] [associations]
symbol:SHM2 "Serine hydroxymethyltransferase, cytosolic"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006544 "glycine metabolic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 172 (65.6 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 38/98 (38%), Positives = 56/98 (57%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGGN+ ID +E++ Q+R+LKAF L P++WG NVQ SGSPAN VY + +
Sbjct: 73 RYYGGNEHIDRMELLCQERALKAFGLTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMG 132
Query: 73 ESLPYKVNTETGL-IDYDKLAESARLFK--PRLIIAET 107
LP+ + G D K++ + F+ P + ET
Sbjct: 133 LDLPHGGHLSHGYQTDSRKISAVSTYFETMPYRVDLET 170
Score = 137 (53.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 49 PYSGSPANFAVYTGLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
P+ G ++ KISA S +FE++PY+V+ ETGLIDYD L ++A L++P++++A T
Sbjct: 136 PHGGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGT 194
>TAIR|locus:2035937 [details] [associations]
symbol:SHM7 "serine hydroxymethyltransferase 7"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEP]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:IAKLQWA HSSP:P07511
EMBL:BT002738 IPI:IPI00548548 RefSeq:NP_564473.1 UniGene:At.23145
ProteinModelPortal:Q84WV0 STRING:Q84WV0 PaxDb:Q84WV0 PRIDE:Q84WV0
EnsemblPlants:AT1G36370.1 GeneID:840543 KEGG:ath:AT1G36370
TAIR:At1g36370 InParanoid:Q84WV0 PhylomeDB:Q84WV0
ProtClustDB:PLN02271 ArrayExpress:Q84WV0 Genevestigator:Q84WV0
Uniprot:Q84WV0
Length = 598
Score = 172 (65.6 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSI 70
+YY GNQ+ID+IE + +R+L AF L+ ++WG NVQPYS + ANFAVYTGL + I
Sbjct: 193 RYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGERI 250
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
G KISA SIFFES PYKVN +TG IDYDKL + A ++P+++I
Sbjct: 270 GKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPKILI 312
>UNIPROTKB|B4DPM9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0008168 GO:GO:0035999 EMBL:AC127537 GO:GO:0008732
GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264 HOVERGEN:HBG002807
UniGene:Hs.513987 UniGene:Hs.636044 HGNC:HGNC:10850 ChiTaRS:SHMT1
EMBL:AL353997 EMBL:AK298415 IPI:IPI01015924 SMR:B4DPM9
STRING:B4DPM9 Ensembl:ENST00000539052 Uniprot:B4DPM9
Length = 345
Score = 167 (63.8 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KISATSIFFES+PYKVN +TG I+YD+L E+ARLF P+LIIA T
Sbjct: 21 KISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGT 64
>ASPGD|ASPL0000008876 [details] [associations]
symbol:AN10745 species:162425 "Emericella nidulans"
[GO:0006544 "glycine metabolic process" evidence=IEA] [GO:0006563
"L-serine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001301 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:LELTHQF ProteinModelPortal:C8V028
EnsemblFungi:CADANIAT00007210 Uniprot:C8V028
Length = 600
Score = 168 (64.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGLKISATSIFF 72
+YYGGN+ IDE E + QQR+L+ F L PE+WG NVQP SGSPAN + L + +
Sbjct: 185 RYYGGNEHIDEAERLCQQRALETFRLSPEEWGVNVQPLSGSPANLYAISALLNTHDRLMG 244
Query: 73 ESLPY 77
LP+
Sbjct: 245 LDLPH 249
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 64 KISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIAET 107
KIS S +FE+LPY+++ TGLIDY+ L + A L++P+LIIA T
Sbjct: 263 KISFISKYFETLPYRLDESTGLIDYESLEKQALLYRPKLIIAGT 306
>TIGR_CMR|CJE_0451 [details] [associations]
symbol:CJE_0451 "serine hydroxymethyltransferase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK13034 HOGENOM:HOG000239405
RefSeq:YP_178470.1 ProteinModelPortal:Q5HW65 SMR:Q5HW65
STRING:Q5HW65 PRIDE:Q5HW65 GeneID:3231213 KEGG:cjr:CJE0451
PATRIC:20042602 OMA:ALATWIC BioCyc:CJEJ195099:GJC0-456-MONOMER
Uniprot:Q5HW65
Length = 414
Score = 112 (44.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 26/51 (50%), Positives = 31/51 (60%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG +F+DEIE +A +R K FN NVQP SGS AN VY L
Sbjct: 58 RYYGGCEFVDEIETLAIERCKKLFNCK----FANVQPNSGSQANQGVYAAL 104
Score = 81 (33.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
G K+S++ +ES Y V + G IDY+K+ E A+ KP+LI+
Sbjct: 125 GAKVSSSGKMYESCFYGVELD-GRIDYEKVREIAKKEKPKLIV 166
>UNIPROTKB|P0A825 [details] [associations]
symbol:glyA species:83333 "Escherichia coli K-12"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0006565 "L-serine
catabolic process" evidence=IDA] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA;IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005829
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016020 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008270 GO:GO:0035999 GO:GO:0006546 GO:GO:0006565
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 ProtClustDB:PRK00011 OMA:GKIDYED EMBL:V00283
EMBL:J01620 PIR:A00559 RefSeq:NP_417046.1 RefSeq:YP_490779.1
PDB:1DFO PDB:1EQB PDB:3G8M PDBsum:1DFO PDBsum:1EQB PDBsum:3G8M
ProteinModelPortal:P0A825 SMR:P0A825 DIP:DIP-36205N IntAct:P0A825
MINT:MINT-7293373 SWISS-2DPAGE:P0A825 PaxDb:P0A825 PRIDE:P0A825
EnsemblBacteria:EBESCT00000003405 EnsemblBacteria:EBESCT00000017377
GeneID:12932320 GeneID:947022 KEGG:ecj:Y75_p2504 KEGG:eco:b2551
PATRIC:32120501 EchoBASE:EB0403 EcoGene:EG10408
BioCyc:EcoCyc:GLYOHMETRANS-MONOMER BioCyc:ECOL316407:JW2535-MONOMER
BioCyc:MetaCyc:GLYOHMETRANS-MONOMER EvolutionaryTrace:P0A825
Genevestigator:P0A825 GO:GO:0019264 Uniprot:P0A825
Length = 417
Score = 117 (46.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG +++D +E +A R+ + F D NVQP+SGS ANFAVYT L
Sbjct: 63 RYYGGCEYVDIVEQLAIDRAKELFGADY----ANVQPHSGSQANFAVYTAL 109
Score = 64 (27.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
G ++ + + +PY ++ TG IDY L + A+ KP++II
Sbjct: 130 GSPVNFSGKLYNIVPYGIDA-TGHIDYADLEKQAKEHKPKMII 171
>TIGR_CMR|GSU_1607 [details] [associations]
symbol:GSU_1607 "serine hydroxymethyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239405
RefSeq:NP_952658.1 ProteinModelPortal:Q74CR5 SMR:Q74CR5
PRIDE:Q74CR5 GeneID:2685603 KEGG:gsu:GSU1607 PATRIC:22026061
OMA:IAKLQWA BioCyc:GSUL243231:GH27-1559-MONOMER Uniprot:Q74CR5
Length = 415
Score = 100 (40.3 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVY 60
+YYGG +D +E +A +R+ + F D NVQP+SGS AN AVY
Sbjct: 59 RYYGGCHHVDVVENLAIERAKELFGADH----ANVQPHSGSQANMAVY 102
Score = 71 (30.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
G ++ + FF +PY V+ ET ID++++ A KP++I+
Sbjct: 126 GSPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKMIV 168
>TIGR_CMR|SO_3471 [details] [associations]
symbol:SO_3471 "serine hydroxymethyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 OMA:AICAKFP GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239403
RefSeq:NP_719020.1 ProteinModelPortal:Q8EBN8 SMR:Q8EBN8
GeneID:1171147 KEGG:son:SO_3471 PATRIC:23526638 Uniprot:Q8EBN8
Length = 417
Score = 101 (40.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG +++D +E +A +R+ + F NVQP+SGS AN AVY L
Sbjct: 63 RYYGGCEYVDVVETLAIERAKQLFGATY----ANVQPHSGSQANSAVYMAL 109
Score = 64 (27.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
G ++ + + +PY ++ E+G IDYD++ A KP+++I
Sbjct: 130 GSPVNFSGRLYNIIPYGID-ESGKIDYDEMERLAVEHKPKMMI 171
>TIGR_CMR|CHY_2557 [details] [associations]
symbol:CHY_2557 "serine hydroxymethyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006544 "glycine metabolic process" evidence=ISS]
[GO:0006553 "lysine metabolic process" evidence=ISS] [GO:0006563
"L-serine metabolic process" evidence=ISS] [GO:0006566 "threonine
metabolic process" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0006760 "folic acid-containing compound
metabolic process" evidence=ISS] [GO:0015947 "methane metabolic
process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 RefSeq:YP_361350.1 ProteinModelPortal:Q3A934
SMR:Q3A934 STRING:Q3A934 GeneID:3728195 KEGG:chy:CHY_2557
PATRIC:21278163 HOGENOM:HOG000239403 OMA:GLLSDPM
BioCyc:CHYD246194:GJCN-2556-MONOMER Uniprot:Q3A934
Length = 421
Score = 102 (41.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVY 60
+YYGG +++D +E +A++R+ K F + NVQP+SG+ AN A Y
Sbjct: 63 RYYGGCEYVDVVENLARERAKKLFGAEH----VNVQPHSGAQANMAAY 106
Score = 62 (26.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
G ++ + + + Y V +T I+Y+K+ E A KP++I+A
Sbjct: 130 GSPVNFSGKLYNFVSYGVEPDTEKINYEKVFELAYKHKPKMIVA 173
>TIGR_CMR|CBU_1419 [details] [associations]
symbol:CBU_1419 "serine hydroxymethyltransferase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:NP_820403.1 ProteinModelPortal:Q83BT3 SMR:Q83BT3
PRIDE:Q83BT3 GeneID:1209325 KEGG:cbu:CBU_1419 PATRIC:17931591
OMA:SKELTGW BioCyc:CBUR227377:GJ7S-1406-MONOMER Uniprot:Q83BT3
Length = 419
Score = 93 (37.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG +F+D E +A R+ + F D NVQP+SGS AN Y L
Sbjct: 63 RYYGGCEFVDIAEQLAIDRAKELFGADY----ANVQPHSGSQANAEAYMAL 109
Score = 70 (29.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
G +S + F++++ Y +N G IDY++ A+ A+ KP++I+A
Sbjct: 130 GSPVSFSGKFYKAVHYGLNAH-GDIDYEQAAQLAQEHKPKVILA 172
>TIGR_CMR|BA_5558 [details] [associations]
symbol:BA_5558 "serine hydroxymethyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 RefSeq:NP_847716.1
RefSeq:YP_022227.1 RefSeq:YP_031404.1 ProteinModelPortal:Q81JY4
SMR:Q81JY4 PRIDE:Q81JY4 DNASU:1085246
EnsemblBacteria:EBBACT00000011325 EnsemblBacteria:EBBACT00000016380
EnsemblBacteria:EBBACT00000022066 GeneID:1085246 GeneID:2820074
GeneID:2851919 KEGG:ban:BA_5558 KEGG:bar:GBAA_5558 KEGG:bat:BAS5165
HOGENOM:HOG000239405 OMA:CREAHAK
BioCyc:BANT260799:GJAJ-5240-MONOMER
BioCyc:BANT261594:GJ7F-5419-MONOMER Uniprot:Q81JY4
Length = 413
Score = 95 (38.5 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVY 60
+YYGG + +D +E +A+ R + F + NVQP+SG+ AN AVY
Sbjct: 59 RYYGGCEHVDVVEDIARDRVKEIFGAEH----VNVQPHSGAQANMAVY 102
Score = 67 (28.6 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
G ++ + + + + Y V+ E+ I+YD + A+ KP+LI+A
Sbjct: 126 GSPVNFSGVQYNFVEYGVDAESHCINYDDVLAKAKEHKPKLIVA 169
>TIGR_CMR|DET_0436 [details] [associations]
symbol:DET_0436 "Serine hydroxymethyltransferase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_181180.1 ProteinModelPortal:Q3Z9B9 SMR:Q3Z9B9
STRING:Q3Z9B9 PRIDE:Q3Z9B9 GeneID:3230231 KEGG:det:DET0436
PATRIC:21607941 OMA:ERFRAIC BioCyc:DETH243164:GJNF-436-MONOMER
Uniprot:Q3Z9B9
Length = 415
Score = 84 (34.6 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVY 60
+YY G ++ D IE +A R+ F+ + NVQP+SG+ AN A Y
Sbjct: 59 RYYAGCEYADAIEELAIDRAKTLFHAEH----ANVQPHSGAQANMAAY 102
Score = 77 (32.2 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLII 104
G K + T + + Y +N ET IDYD L + A +PRLI+
Sbjct: 126 GSKANFTGKLYHVIEYGLNAETERIDYDNLEKLALEHRPRLIV 168
>UNIPROTKB|O53441 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA] [GO:0006563
"L-serine metabolic process" evidence=IDA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IDA] [GO:0042783 "active evasion of
host immune response" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005886
GO:GO:0005737 GO:GO:0005618 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006544 GO:GO:0035999 GO:GO:0042783
GO:GO:0006545 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 PIR:C70896
RefSeq:NP_335569.1 RefSeq:YP_006514462.1 PDB:1LXB PDB:3H7F
PDBsum:1LXB PDBsum:3H7F ProteinModelPortal:O53441 SMR:O53441
PRIDE:O53441 EnsemblBacteria:EBMYCT00000001613
EnsemblBacteria:EBMYCT00000071670 GeneID:13319665 GeneID:924979
KEGG:mtc:MT1125 KEGG:mtu:Rv1093 KEGG:mtv:RVBD_1093 PATRIC:18124236
TubercuList:Rv1093 OMA:PETHRID ProtClustDB:PRK00011 BRENDA:2.1.2.1
EvolutionaryTrace:O53441 Uniprot:O53441
Length = 426
Score = 86 (35.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YYGG + +D +E +A+ R+ F + NVQP+SG+ AN AV L
Sbjct: 60 RYYGGCEHVDVVENLARDRAKALFGAE----FANVQPHSGAQANAAVLHAL 106
Score = 68 (29.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
G++++ + +E+ Y V+ T LID D + +A F+P++IIA
Sbjct: 127 GMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIA 170
>TIGR_CMR|SPO_1572 [details] [associations]
symbol:SPO_1572 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 85 (35.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSGSPANFAVYTGL 63
+YYGG Q++D E +A +R+ + F GC NVQP SGS AN V+ L
Sbjct: 70 RYYGGCQYVDIAENLAIERAKQLF-------GCGFANVQPNSGSQANQGVFQAL 116
Score = 69 (29.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 71 FFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
+F ++ Y V + L+DYD++ A+ +P+LIIA
Sbjct: 146 WFNAVQYGVRQQDNLLDYDQVEALAKEHRPKLIIA 180
>TIGR_CMR|SPO_2940 [details] [associations]
symbol:SPO_2940 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 85 (35.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSGSPANFAVYTGL 63
+YYGG Q++D E +A +R+ + F GC NVQP SGS AN V+ L
Sbjct: 70 RYYGGCQYVDIAENLAIERAKQLF-------GCGFANVQPNSGSQANQGVFQAL 116
Score = 69 (29.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 71 FFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
+F ++ Y V + L+DYD++ A+ +P+LIIA
Sbjct: 146 WFNAVQYGVRQQDNLLDYDQVEALAKEHRPKLIIA 180
>TIGR_CMR|NSE_0218 [details] [associations]
symbol:NSE_0218 "serine hydroxymethyltransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897 RefSeq:YP_506113.1
ProteinModelPortal:Q2GEI3 SMR:Q2GEI3 STRING:Q2GEI3 PRIDE:Q2GEI3
GeneID:3932003 KEGG:nse:NSE_0218 PATRIC:22680535 OMA:INEVIQG
ProtClustDB:CLSK2528038 BioCyc:NSEN222891:GHFU-249-MONOMER
Uniprot:Q2GEI3
Length = 419
Score = 89 (36.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGCNVQPYSGSPANFAVYTGL 63
+YY G ++ D+IE +A +R K F NVQP+SGS AN AV+ L
Sbjct: 68 RYYCGCEYADQIERLAIERVCKLFGCSY----ANVQPHSGSQANQAVFLAL 114
Score = 64 (27.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 62 GLKISATSIFFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
G ++ + +F ++ Y V + ID D++ + A+ PR+IIA
Sbjct: 135 GASVNLSGKWFNAVHYNVRRDNFEIDMDEVRDLAKKHSPRMIIA 178
>TIGR_CMR|APH_0154 [details] [associations]
symbol:APH_0154 "serine hydroxymethyltransferase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_504778.1 HSSP:P34897 ProteinModelPortal:Q2GLH3 SMR:Q2GLH3
STRING:Q2GLH3 GeneID:3930419 KEGG:aph:APH_0154 PATRIC:20948876
OMA:FKAYAHQ BioCyc:APHA212042:GHPM-189-MONOMER Uniprot:Q2GLH3
Length = 425
Score = 78 (32.5 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 23/54 (42%), Positives = 28/54 (51%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSGSPANFAVYTGL 63
+YY G +D E +A +R K F GC NVQP+SGS AN VY L
Sbjct: 65 RYYCGCSEVDVAETLAVERLCKLF-------GCKYANVQPHSGSQANQQVYMAL 111
Score = 75 (31.5 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 71 FFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
+F ++PY V +T L+D ++ E A KP LIIA
Sbjct: 141 WFNAVPYNVRRDTNLLDMGEIEEIALRVKPNLIIA 175
>TIGR_CMR|ECH_0311 [details] [associations]
symbol:ECH_0311 "serine hydroxymethyltransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 HSSP:P34897
RefSeq:YP_507132.1 ProteinModelPortal:Q2GHF1 SMR:Q2GHF1
STRING:Q2GHF1 PRIDE:Q2GHF1 GeneID:3927190 KEGG:ech:ECH_0311
PATRIC:20576127 OMA:LELTHQF BioCyc:ECHA205920:GJNR-311-MONOMER
Uniprot:Q2GHF1
Length = 420
Score = 78 (32.5 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 13 KYYGGNQFIDEIEIVAQQRSLKAFNLDPEQWGC---NVQPYSGSPANFAVYTGL 63
+YY G F D +E +A +R + F GC NVQP+SGS AN V+ L
Sbjct: 65 RYYCGCHFADIVENLAIERLCRLF-------GCKFANVQPHSGSQANQGVFAAL 111
Score = 74 (31.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 66 SATSI---FFESLPYKVNTETGLIDYDKLAESARLFKPRLIIA 105
SA SI +F ++ Y+V+ +TGLID D++ + A P LIIA
Sbjct: 133 SAPSISGKWFNAVQYQVDRDTGLIDMDEIEKLAVEHNPSLIIA 175
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 240 228 0.00081 113 3 11 22 0.43 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 69
No. of states in DFA: 611 (65 KB)
Total size of DFA: 193 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.71u 0.12s 18.83t Elapsed: 00:00:01
Total cpu time: 18.71u 0.12s 18.83t Elapsed: 00:00:01
Start: Thu Aug 15 11:06:11 2013 End: Thu Aug 15 11:06:12 2013